Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 40S Identification type Control Fraction Average Fraction Std. Dev. Fraction 1 Fraction 2 Fraction 3 Fraction 4 Fraction 5 Fraction 6 Fraction 7 Fraction 8 Fraction 9 Fraction 10 Experiment 40S Experiment Control Intensity Intensity 40S Intensity Control Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count LFQ intensity 40S LFQ intensity Control AAAAAAALQAK TILRQARNHKLRVDKAAAAAAALQAKSDEK RVDKAAAAAAALQAKSDEKAAVAGKKPVVG K A A A K S 8 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 955.54508 P36578 P36578 354 364 RPL4 60S ribosomal protein L4 yes yes 2 3.5624E-06 179.21 By MS/MS By MS/MS 6.5 0.5 2 2 2 2 8507800 8329700 178150 0 838 0 0;1;2;3 0;1;2;3 2 4 73133 219500 AAAAAAGPSPGSGPGDSPEGPEGEAPERR ______________________________ GDSPEGPEGEAPERRRKAHGMLKLYYGLSE M A A R R R 7 2 0 1 0 0 4 6 0 0 0 0 0 0 6 3 0 0 0 0 0 0 29 1 2644.2113 Q9UID3 Q9UID3 2 30 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 3 0.00024156 79.445 By MS/MS 4 0 1 1 505230 505230 0 1 2741 1 4 4 4 1 47545 0 AAAAAAGSGTPR ______________________________ ______________________________ M A A P R E 6 1 0 0 0 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 0 0 12 0 999.50976 Q9NR33 Q9NR33 2 13 POLE4 DNA polymerase epsilon subunit 4 yes yes 2 0.019021 86.882 By MS/MS 9 0 1 1 639350 639350 0 2 2547 2 5 5 5 1 12582 0 AAAAAATAAAAASIR ______________________________ AAAAAATAAAAASIRERQTVALKRMLNFNV M A A I R E 11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 15 0 1256.6837 Q8WVM8 Q8WVM8 2 16 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 1.719E-16 257.13 By MS/MS 6 0.816 1 1 1 3 4473400 4473400 0 3 2028 3 6;7;8 6 6 1 43759 0 AAAAAATAAAAASIRER ______________________________ AAAATAAAAASIRERQTVALKRMLNFNVPH M A A E R Q 11 2 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 17 1 1541.8274 Q8WVM8 Q8WVM8 2 18 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.00036697 168.98 By MS/MS 5 0 1 1 4820800 4820800 0 4 2028 4 9 7 7 1 48350 0 AAAAADLANR YLGFGTPSNLGKGRRAAAAADLANRSGESN GKGRRAAAAADLANRSGESNTHQDIEEKDR R A A N R S 6 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 0 942.48829 O76031 O76031 453 462 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00069986 129.42 By MS/MS By matching 6.67 1.49 2 1 1 1 1 5 1 5175300 5117900 57325 5 360 5 10;11;12;13;14;15 8 8 1 55668 48141 AAAAAGLGGGGAGPGPEAGDFLAR ______________________________ GGAGPGPEAGDFLARYRLVSNKLKKRFLRK M A A A R Y 8 1 0 1 0 0 1 8 0 0 2 0 0 1 2 0 0 0 0 0 0 0 24 0 2009.9919 P23610 P23610 2 25 F8A1 Factor VIII intron 22 protein yes yes 2 1.1315E-22 268.59 By MS/MS 7 0 1 1 258550 258550 0 6 709 6 16 9 9 1 4058.7 0 AAAAAGTATSQR ______________________________ ______________________________ M A A Q R F 6 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 0 12 0 1074.5418 Q9Y2Z0 Q9Y2Z0 2 13 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.00031144 145.46 By MS/MS By MS/MS 7 0 2 1 1 7241800 7163500 78333 7 2850 7 17;18 10;11 11 2 112450 141080 AAAAAQGGGGGEPR ______________________________ MAAAAAQGGGGGEPRRTEGVGPGVPGEVEM M A A P R R 5 1 0 0 0 1 1 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 14 0 1168.5585 P27361 P27361 2 15 MAPK3 Mitogen-activated protein kinase 3 yes yes 2 0.0051329 105.2 By MS/MS 7 0 1 1 403420 403420 0 8 740 8 19 12 12 1 6333 0 AAAAASAPQQLSDEELFSQLR ______________________________ APQQLSDEELFSQLRRYGLSPGPVTESTRP M A A L R R 6 1 0 1 0 3 2 0 0 0 3 0 0 1 1 3 0 0 0 0 0 0 21 0 2202.0917 Q9Y2U8 Q9Y2U8 2 22 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 1.5868E-05 144.5 By MS/MS 4 0 1 1 89696 89696 0 9 2844 9 20 13 13 1 8441 0 AAAAASASQDELNQLER ______________________________ AAASASQDELNQLERVFLRLGHAETDEQLQ M A A E R V 6 1 1 1 0 2 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 17 0 1743.8388 Q5VYK3 Q5VYK3 2 18 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 5.1899E-24 323.44 By MS/MS 2 0 1 1 176140 176140 0 10 1656 10 21 14 14 1 59578 0 AAAAASGAGGAAGAGTGGAGPAGR ______________________________ GAAGAGTGGAGPAGRLLPPPAPGSPAAPAA M A A G R L 11 1 0 0 0 0 0 9 0 0 0 0 0 0 1 1 1 0 0 0 0 0 24 0 1753.8456 Q9Y2K2 Q9Y2K2 2 25 SIK3 Serine/threonine-protein kinase SIK3 yes yes 2 1.6599E-11 279.19 By MS/MS 3 0 1 1 442150 442150 0 11 2832 11 22 15 15 1 8090.1 0 AAAAASHLNLDALR ______________________________ MAAAAASHLNLDALREVLECPICMESFTEE M A A L R E 6 1 1 1 0 0 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 14 0 1392.7474 Q13049 Q13049 2 15 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 2 0.00078633 100.04 By MS/MS 5 0 1 1 1290900 1290900 0 12 1349 12 23 16 16 1 12947 0 AAAADSFSGGPAGVRLPR ______________________________ ADSFSGGPAGVRLPRSPPLKVLAEQLRRDA M A A P R S 5 2 0 1 0 0 0 3 0 0 1 0 0 1 2 2 0 0 0 1 0 0 18 1 1698.8802 Q96E14 Q96E14 2 19 RMI2 RecQ-mediated genome instability protein 2 yes yes 2 0.0034565 96.745 By MS/MS 9 0 1 1 261330 261330 0 13 2140 13 24 17 17 1 5143 0 AAAAECDVVMAATEPELLDDQEAKR ______________________________ AATEPELLDDQEAKREAETFKEQGNAYYAK M A A K R E 7 1 0 3 1 1 4 0 0 0 2 1 1 0 1 0 1 0 0 2 0 0 25 1 2702.2527 Q99615 Q99615 2 26 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.00084065 86.439 By MS/MS 6 0 1 1 396810 396810 0 14 2253 14 25 18 18 1 2727.7 0 AAAAELSLLEK ______________________________ ______________________________ M A A E K S 4 0 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1114.6234 O43324 O43324 2 12 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 1.5535E-06 198.61 By MS/MS 9.5 0.5 2 2 4 22175000 22175000 0 15 204 15 26;27;28;29 19;20;21;22;23 23 5 576100 0 AAAAKPNNLSLVVHGPGDLR ______________________________ PNNLSLVVHGPGDLRLENYPIPEPGPNEVL M A A L R L 4 1 2 1 0 0 0 2 1 0 3 1 0 0 2 1 0 0 0 2 0 0 20 1 1999.0963 Q00796 Q00796 2 21 SORD Sorbitol dehydrogenase yes yes 3 5.5504E-06 148.36 By MS/MS 7 0 1 1 2147100 2147100 0 16 1263 16 30 24 24 1 33706 0 AAAALRR ______________________________ ______________________________ M A A R R F 4 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 727.44531 Q9BSF4 Q9BSF4 2 8 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.020894 120.76 By MS/MS By matching 7.2 3.19 1 2 1 1 4 1 8539800 8487700 52048 17 2305 17 31;32;33;34;35 25;26;27;28 26 4 129820 70236 AAAAPVAADDDERR ______________________________ MAAAAPVAADDDERRRRPGAALEDSRSQEG M A A R R R 6 2 0 3 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 14 1 1426.6801 Q9H5N1 Q9H5N1 2 15 RABEP2 Rab GTPase-binding effector protein 2 yes yes 2 0.006294 104.79 By MS/MS 5 0 1 1 399810 399810 0 18 2452 18 36 29 29 1 4009.9 0 AAAASAAEAGIATTGTEDSDDALLK SMEEQRQRQEEEARRAAAASAAEAGIATTG IATTGTEDSDDALLKMTISQQEFGRTGLPD R A A L K M 9 0 0 3 0 0 2 2 0 1 2 1 0 0 0 2 3 0 0 0 0 0 25 0 2319.1078 P55036 P55036 238 262 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2;3 3.4391E-39 396.31 By MS/MS 6.33 0.471 2 1 3 7255300 7255300 0 19 1052 19 37;38;39 30;31 30 2 54178 0 AAAAVEPDVVVK LSARLRALRQRQLDRAAAAVEPDVVVKRQE LDRAAAAVEPDVVVKRQEALAAARLKMQEE R A A V K R 4 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 4 0 0 12 0 1167.6499 Q9BQE4 Q9BQE4 66 77 VIMP Selenoprotein S yes yes 2 0.0033329 108.43 By MS/MS 9 0 1 1 970290 970290 0 20 2291 20 40 32 32 1 19095 0 AAAAVGAGHGAGGPGAASSSGGAR ______________________________ GAGGPGAASSSGGAREGARVAALCLLWYAL M A A A R E 9 1 0 0 0 0 0 8 1 0 0 0 0 0 1 3 0 0 0 1 0 0 24 0 1863.8936 Q96K37 Q96K37 2 25 SLC35E1 Solute carrier family 35 member E1 yes yes 3 8.1243E-05 103.73 By MS/MS 1 0 1 1 200750 200750 0 21 2182 21 41 33 33 1 48375 0 AAAAVQGGR ______________________________ ______________________________ M A A G R S 4 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 799.43005 Q15005 Q15005 2 10 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.0088322 104.21 By MS/MS 9.5 0.5 1 1 2 2455200 2455200 0 22 1469 22 42;43 34 34 1 53958 0 AAAAVVEFQR ______________________________ ______________________________ M A A Q R A 4 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 10 0 1060.5665 O00231 O00231 2 11 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 2.2999E-07 180.87 By MS/MS By MS/MS 7.83 1.34 1 2 1 1 1 5 1 16382000 16172000 210310 23 93 23 44;45;46;47;48;49 35;36;37;38 37 4 234430 378750 AAAAVVVPAEWIK ______________________________ ______________________________ M A A I K N 5 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 3 0 0 13 0 1323.7551 Q8NI27 Q8NI27 2 14 THOC2 THO complex subunit 2 yes yes 2 0.0059976 102.61 By MS/MS 5 1 1 1 2 170900 170900 0 24 1971 24 50;51 39;40 40 2 8110.1 0 AAAEDVNVTFEDQQK ______________________________ AAAEDVNVTFEDQQKINKFARNTSRITELK K A A Q K I 3 0 1 2 0 2 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 15 0 1663.7689 Q9NQP4 Q9NQP4 8 22 PFDN4 Prefoldin subunit 4 yes yes 2 5.4658E-70 369.42 By MS/MS 10 0 1 1 1450400 1450400 0 25 2538 25 52 41;42;43 41 3 78172 0 AAAEEEDGGPEGPNR ______________________________ AAAEEEDGGPEGPNRERGGAGATFECNICL M A A N R E 3 1 1 1 0 0 4 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 15 0 1497.6332 Q99942 Q99942 2 16 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 2 3.7789E-11 240 By MS/MS 9 0 1 1 1210600 1210600 0 26 2273 26 53 44;45 45 2 23825 0 AAAEEEDGGPEGPNRER ______________________________ AEEEDGGPEGPNRERGGAGATFECNICLET M A A E R G 3 2 1 1 0 0 5 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 17 1 1782.7769 Q99942 Q99942 2 18 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 2;3 0.00080963 84.169 By MS/MS By matching 9.17 0.373 5 1 5 1 4682600 4611900 70688 27 2273 27;28 54;55;56;57;58;59 46;47;48;49 47 4 94337 161190 AAAEVNQDYGLDPK RMPTPVIKAFGILKRAAAEVNQDYGLDPKI RAAAEVNQDYGLDPKIANAIMKAADEVAEG R A A P K I 3 0 1 2 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1489.7049 P07954 P07954 102 115 FH Fumarate hydratase, mitochondrial yes yes 2 2.0452E-05 193.49 By MS/MS 7 0 1 1 1957400 1957400 0 28 516 29 60 50 50 1 30728 0 AAAFEEQENETVVVK AVKRASDNLVKAAQKAAAFEEQENETVVVK AAAFEEQENETVVVKEKMVGGIAQIIAAQE K A A V K E 3 0 1 0 0 1 4 0 0 0 0 1 0 1 0 0 1 0 0 3 0 0 15 0 1662.8101 Q9Y490 Q9Y490 2477 2491 TLN1 Talin-1 yes yes 2 4.6857E-07 209.67 By MS/MS 2 0 1 1 297490 297490 0 29 2888 30 61 51 51 1 100620 0 AAAGAAATHLEVAR ______________________________ MAAAGAAATHLEVARGKRAALFFAAVAIVL M A A A R G 7 1 0 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 14 0 1307.6946 Q96S52 Q96S52 2 15 PIGS GPI transamidase component PIG-S yes yes 2 0.00055192 157.68 By MS/MS 5 0 1 1 1770900 1770900 0 30 2230 31 62 52 52 1 17761 0 AAAGGAEGRR ______________________________ ______________________________ M A A R R A 4 2 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 914.46823 Q86UK7 Q86UK7 2 11 ZNF598 Zinc finger protein 598 yes yes 2 0.029603 87.754 By MS/MS By MS/MS 4 0 2 1 1 2476600 2444800 31788 31 1821 32 63;64 53;54 53 2 230070 67730 AAAGGGGGGAAAAGR ______________________________ AAAGGGGGGAAAAGRAYSFKVVLLGEGCVG M A A G R A 7 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 1070.5217 Q9UL25 Q9UL25 2 16 RAB21 Ras-related protein Rab-21 yes yes 2 2.4084E-11 243.03 By MS/MS 9 0.816 1 1 1 3 5894400 5894400 0 32 2769 33 65;66;67 55;56 55 2 91263 0 AAAGPAAGPTGPEPMPSYAQLVQR ______________________________ TGPEPMPSYAQLVQRGWGSALAAARGCTDC M A A Q R G 6 1 0 0 0 2 1 3 0 0 1 0 1 0 5 1 1 0 1 1 0 0 24 0 2336.1583 P27544 P27544 2 25 CERS1 Ceramide synthase 1 yes yes 3 0.0013522 79.511 By MS/MS 1.5 0.5 1 1 2 293120 293120 0 33 742 34 68;69 57;58 58 369 2 78288 0 AAAIGITQVVISR CVKDRNENEIGHSRRAAAIGITQVVISRIT RRAAAIGITQVVISRITMSAPGMILLPVIM R A A S R I 3 1 0 0 0 1 0 1 0 3 0 0 0 0 0 1 1 0 0 2 0 0 13 0 1297.7718 Q96NB2 Q96NB2 220 232 SFXN2 Sideroflexin-2 yes yes 2 0.0003686 145.23 By MS/MS 8 0 1 1 2089200 2089200 0 34 2202 35 70 59 59 1 26376 0 AAALAAAVAQDPAASGAPSS KRLKEEKQKRKKEARAAALAAAVAQDPAAS AAVAQDPAASGAPSS_______________ R A A S S - 10 0 0 1 0 1 0 1 0 0 1 0 0 0 2 3 0 0 0 1 0 0 20 0 1695.8428 Q8TAE8 Q8TAE8 203 222 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2;3 2.1658E-05 179.46 By MS/MS By matching 9 0 3 2 1 9368900 9299700 69242 35 1974 36 71;72;73 60;61 60 2 183020 157890 AAALASLKK ASFNFLGLLDNPRVKAAALASLKKYGVGTC DNPRVKAAALASLKKYGVGTCGPRGFYGTF K A A K K Y 4 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 9 1 871.5491 O15269 O15269 119 127 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.0092534 113.26 By MS/MS 6.5 0.5 1 1 2 6611300 6611300 0 36 177 37 74;75 62 62 1 47126 0 AAAMDVDTPSGTNSGAGK ______________________________ MDVDTPSGTNSGAGKKRFEVKKWNAVALWA M A A G K K 4 0 1 2 0 0 0 3 0 0 0 1 1 0 1 2 2 0 0 1 0 0 18 0 1648.7363 P62877 P62877 2 19 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 1.3219E-44 327.62 By MS/MS 10 0 2 2 1461600 1461600 0 37 1180 38;39 76;77 63;64 64 684 2 78772 0 AAAMDVDTPSGTNSGAGKK ______________________________ DVDTPSGTNSGAGKKRFEVKKWNAVALWAW M A A K K R 4 0 1 2 0 0 0 3 0 0 0 2 1 0 1 2 2 0 0 1 0 0 19 1 1776.8312 P62877 P62877 2 20 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 1.9304E-05 193.81 By MS/MS 10 0 2 2 1115400 1115400 0 38 1180 40;41 78;79 65;66 65 684 2 60117 0 AAAPAPEEEMDECEQALAAEPK EEKQKPQAERKEEKKAAAPAPEEEMDECEQ EEMDECEQALAAEPKAKDPFAHLPKSTFVL K A A P K A 7 0 0 1 1 1 6 0 0 0 1 1 1 0 3 0 0 0 0 0 0 0 22 0 2356.0199 P26641 P26641 254 275 EEF1G Elongation factor 1-gamma yes yes 2 0.0085438 76.574 By MS/MS 6.5 0.5 1 1 2 4812900 4812900 0 39 736 42 80;81 67 67 1 38081 0 AAAQCYIDLIIK AGTLVTLSSAPTAIKAAAQCYIDLIIKESD AIKAAAQCYIDLIIKESDNNVKLIVLDRLI K A A I K E 3 0 0 1 1 1 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 0 12 0 1377.7326 P53618 P53618 280 291 COPB1 Coatomer subunit beta yes yes 2 0.0057454 87.184 By MS/MS 5 0 1 1 93607 93607 0 40 1033 43 82 68 68 1 938.83 0 AAAQEQYSAAVAR MVIDGVTYPGNIKEKAAAQEQYSAAVARGE EKAAAQEQYSAAVARGESAGLVRATGRKTE K A A A R G 6 1 0 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 13 0 1334.6579 CON__Q3T052 CON__Q3T052 100 112 yes yes 2 0.0015595 116.03 By MS/MS 9 0 1 1 144730 144730 0 + 41 64 44 83 69 69 1 2848.2 0 AAAQLLQSQAQQSGAQQTK KKELEEEVNNFQKKKAAAQLLQSQAQQSGA LLQSQAQQSGAQQTKKDKDKKNASFT____ K A A T K K 5 0 0 0 0 7 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 19 0 1956.0025 Q9NVA2 Q9NVA2 400 418 SEPT11 Septin-11 yes yes 2 9.3423E-88 383.98 By MS/MS 6.5 0.5 1 1 2 1779100 1779100 0 42 2592 45 84;85 70 70 1 13255 0 AAAQYYLGNFR KCADPDLNAVLYTNRAAAQYYLGNFRSALN YTNRAAAQYYLGNFRSALNDVTAARKLKPC R A A F R S 3 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 11 0 1272.6251 O95801 O95801 124 134 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 0.00018901 144.09 By MS/MS 7.5 0.5 1 1 2 1191800 1191800 0 43 427 46 86;87 71 71 1 17487 0 AAASGSVLQR ______________________________ ______________________________ M A A Q R C 3 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 958.51959 Q5VWZ2 Q5VWZ2 2 11 LYPLAL1 Lysophospholipase-like protein 1 yes yes 2 0.011818 93.178 By MS/MS 8.5 0.5 1 1 2 2714700 2714700 0 44 1655 47 88;89 72 72 1 36974 0 AAASVTPPGSLELLQPGFSK ______________________________ TPPGSLELLQPGFSKTLLGTKLEAKYLCSA M A A S K T 3 0 0 0 0 1 1 2 0 0 3 1 0 1 3 3 1 0 0 1 0 0 20 0 1969.052 Q12933 Q12933 2 21 TRAF2 TNF receptor-associated factor 2 yes yes 2;3 8.9881E-06 187.63 By MS/MS 6 0 2 2 2081700 2081700 0 45 1341 48 90;91 73;74 73 2 14310 0 AAATIDSLASR EKIIKQAKHIFLRSRAAATIDSLASRIEDP LRSRAAATIDSLASRIEDPQIQAHWSNIND R A A S R I 4 1 0 1 0 0 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 11 0 1074.5669 Q9NVC6 Q9NVC6 444 454 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 2 0.0041362 106.2 By MS/MS 5 0 1 1 641520 641520 0 46 2593 49 92 75 75 1 6434.1 0 AAATPESQEPQAK EIGACSDEGTAQEGKAAATPESQEPQAKGA GKAAATPESQEPQAKGAEASAASEEEAGPQ K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 0.00091177 113.67 By MS/MS 7 0 1 1 619460 619460 0 47 943 50 93 76 76 1 9724.4 0 AAAVAAAGAGEPQSPDELLPK ______________________________ AGAGEPQSPDELLPKGDAEKPEEELEEDDD M A A P K G 7 0 0 1 0 1 2 2 0 0 2 1 0 0 3 1 0 0 0 1 0 0 21 0 1962.0058 Q9NS69 Q9NS69 2 22 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 2;3 2.152E-08 236.4 By MS/MS 9.33 0.471 2 1 3 5464800 5464800 0 48 2566 51 94;95;96 77;78;79;80;81;82 77 6 110750 0 AAAVAVAAASRR ______________________________ ______________________________ M A A R R Q 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 12 1 1112.6414 Q7Z5L9 Q7Z5L9 2 13 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.00014708 156.35 By MS/MS 5 0 1 1 2399200 2399200 0 49 1799 52 97 83 83 1 24063 0 AAAVLPVLDLAQR KRIEAIVKNYPEGHKAAAVLPVLDLAQRQN HKAAAVLPVLDLAQRQNGWLPISAMNKVAE K A A Q R Q 4 1 0 1 0 1 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 13 0 1335.7874 P19404 P19404 76 88 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 2 0.0077324 95.483 By MS/MS 8.5 0.5 1 1 2 784270 784270 0 50 662 53 98;99 84;85 85 2 11321 0 AAAVQADDVEVLK GPADAMELADHLVKRAAAVQADDVEVLKVG KRAAAVQADDVEVLKVGRTQLIDAVLNLCT R A A L K V 4 0 0 2 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 13 0 1327.6983 Q8N201 Q8N201 683 695 INTS1 Integrator complex subunit 1 yes yes 2 0.00066482 132.17 By MS/MS 2 0 1 1 681150 681150 0 51 1907 54 100 86 86 1 230390 0 AAAYSAQVQPVDGATR AQMEAEWREALRALRAAAYSAQVQPVDGAT AAYSAQVQPVDGATRKKSQRVCRPRSIWRA R A A T R K 5 1 0 1 0 2 0 1 0 0 0 0 0 0 1 1 1 0 1 2 0 0 16 0 1603.7954 Q9H7E9 Q9H7E9 183 198 C8orf33 UPF0488 protein C8orf33 yes yes 2 5.928E-33 298.91 By MS/MS 8.5 0.5 1 1 2 2661400 2661400 0 52 2463 55 101;102 87 87 1 35037 0 AACDLVR IRRDLEGSDIDTRRRAACDLVRGLCKFFEG SDIDTRRRAACDLVRGLCKFFEGPVTGIFS R A A V R G 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 803.39597 P55060 P55060 385 391 CSE1L Exportin-2 yes yes 2 0.044235 94.006 By MS/MS By matching 4 0 2 1 1 4385500 4360400 25049 53 1053 56 103;104 88 88 1 410350 53372 AACFAIQK IPAYSKRGDIVFVDRAACFAIQKGLQASRS DIVFVDRAACFAIQKGLQASRSDIKLFKHN R A A Q K G 3 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 907.45857 O15269 O15269 190 197 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.0025966 137.44 By MS/MS 6.5 0.5 1 1 2 10586000 10586000 0 54 177 57 105;106 89 89 1 77287 0 AACQEAQVFGNQLIPPNAQVK GHWLYGKHCDNLLRRAACQEAQVFGNQLIP QVFGNQLIPPNAQVKKATVFLNPAACKGKA R A A V K K 4 0 2 0 1 4 1 1 0 1 1 1 0 1 2 0 0 0 0 2 0 0 21 0 2282.1478 Q53H12 Q53H12 41 61 AGK Acylglycerol kinase, mitochondrial yes yes 3 1.8358E-05 122.44 By MS/MS 7 0 1 1 1518200 1518200 0 55 1589 58 107 90;91 90 2 23832 0 AADAEAEVASLNR ALKDAQEKLELAEKKAADAEAEVASLNRRI KKAADAEAEVASLNRRIQLVEEELDRAQER K A A N R R 5 1 1 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1315.6368 P06753 P06753 79 91 TPM3 Tropomyosin alpha-3 chain yes yes 2 0.00459 104.82 By MS/MS 8 0 1 1 609170 609170 0 56 504 59 108 92 92 1 7690.7 0 AADAEAEVASLNRR ALKDAQEKLELAEKKAADAEAEVASLNRRI KAADAEAEVASLNRRIQLVEEELDRAQERL K A A R R I 5 2 1 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 14 1 1471.7379 P06753 P06753 79 92 TPM3 Tropomyosin alpha-3 chain yes yes 2 0.033638 67.726 By MS/MS 8 0 1 1 600620 600620 0 57 504 60 109 93 93 1 7582.8 0 AADEEAFEDNSEEYIR TSICEKVIVPNMEFRAADEEAFEDNSEEYI ADEEAFEDNSEEYIRRDLEGSDIDTRRRAA R A A I R R 3 1 1 2 0 0 5 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 16 0 1886.7806 P55060 P55060 356 371 CSE1L Exportin-2 yes yes 2 1.3193E-56 354.97 By MS/MS 4 0 1 1 3216400 3216400 0 58 1053 61 110 94 94 1 302690 0 AADEEAFEDNSEEYIRR TSICEKVIVPNMEFRAADEEAFEDNSEEYI DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC R A A R R D 3 2 1 2 0 0 5 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 17 1 2042.8817 P55060 P55060 356 372 CSE1L Exportin-2 yes yes 2;3 0.0013137 134.75 By MS/MS 4.5 0.5 2 2 4 18466000 18466000 0 59 1053 62 111;112;113;114 95;96;97 96 3 1544700 0 AADFIDQALAQK ANDTQEFNLSAYFERAADFIDQALAQKNGR FERAADFIDQALAQKNGRVLVHCREGYSRS R A A Q K N 4 0 0 2 0 2 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 12 0 1289.6616 P51452 P51452 105 116 DUSP3 Dual specificity protein phosphatase 3 yes yes 2 0.00016613 152.69 By MS/MS 9.5 0.5 1 1 2 984240 984240 0 60 994 63 115;116 98 98 1 22805 0 AADISESSGADCKGDPR ______________________________ DISESSGADCKGDPRNSAKLDADYPLRVLY M A A P R N 3 1 0 3 1 0 1 2 0 1 0 1 0 0 1 3 0 0 0 0 0 0 17 1 1734.7479 O43583 O43583 2 18 DENR Density-regulated protein yes yes 2 0.003205 105.65 By MS/MS 8 0 1 1 1408000 1408000 0 61 219 64 117 99 99 1 17776 0 AADSICDGDLVDSQIR AAGGDMKKHLMLLSRAADSICDGDLVDSQI ADSICDGDLVDSQIRSKQNWSLLPAQAIYA R A A I R S 2 1 0 4 1 1 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 16 0 1733.789 P35251 P35251 911 926 RFC1 Replication factor C subunit 1 yes yes 2 8.4812E-24 279.62 By MS/MS 3 0 1 1 674030 674030 0 62 818 65 118 100 100 1 12333 0 AADTQVSETLKR ______________________________ ______________________________ M A A K R F 2 1 0 1 0 1 1 0 0 0 1 1 0 0 0 1 2 0 0 1 0 0 12 1 1317.6888 Q92616 Q92616 2 13 GCN1L1 Translational activator GCN1 yes yes 2 1.1914E-05 170.89 By MS/MS By MS/MS 3.12 1.62 1 3 1 1 1 1 7 1 22494000 22364000 130720 63 2064 66;67 119;120;121;122;123;124;125;126 101;102;103;104;105;106;107 101 7 4544200 184860 AAEAADLGLGAAVPVELRR ______________________________ ADLGLGAAVPVELRRERRMVCVEYPGVVRD M A A R R E 6 2 0 1 0 0 2 2 0 0 3 0 0 0 1 0 0 0 0 2 0 0 19 1 1878.0323 Q9Y5Q8 Q9Y5Q8 2 20 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.00019112 151.66 By MS/MS 5.5 0.5 1 1 2 2605800 2605800 0 64 2919 68 127;128 108;109 109 2 18376 0 AAEAAGGKYR ______________________________ ______________________________ M A A Y R S 4 1 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 10 1 992.50394 Q96A65 Q96A65 2 11 EXOC4 Exocyst complex component 4 yes yes 2 0.016289 88.37 By MS/MS By matching 4 0 2 1 1 2275200 2224100 51090 65 2104 69 129;130 110 110 1 209300 108860 AAEAAINILK TCTGEGTSKKLAKHRAAEAAINILKANASI LAKHRAAEAAINILKANASICFAVPDPLMP R A A L K A 4 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1012.5917 O75569 O75569 91 100 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes yes 2 0.0032882 109.44 By MS/MS 7.5 0.5 1 1 2 2964100 2964100 0 66 334 70 131;132 111 111 1 43676 0 AAEADGPLKR ______________________________ ______________________________ M A A K R L 3 1 0 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1026.5458 O75352 O75352 2 11 MPDU1 Mannose-P-dolichol utilization defect 1 protein yes yes 2 0.0021274 113.26 By MS/MS 9 0 2 2 2299100 2299100 0 67 314 71 133;134 112;113 113 2 45248 0 AAEALAAEAVASR ______________________________ ______________________________ M A A S R L 7 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1228.6412 A2RTX5 A2RTX5 2 14 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 2 0.00039823 146.71 By MS/MS 4 0 1 1 359700 359700 0 68 12 72 135 114 114 1 33851 0 AAEALAAEAVASRLER ______________________________ AEALAAEAVASRLERQEEDIRWLWSEVERL M A A E R Q 7 2 0 0 0 0 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 16 1 1626.8689 A2RTX5 A2RTX5 2 17 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 2 0.0012405 113.77 By MS/MS 4 0 1 1 81000 81000 0 69 12 73 136 115;116;117 116 3 7622.6 0 AAECNIVVTQPR QVPQFILDDFIQNDRAAECNIVVTQPRRIS NDRAAECNIVVTQPRRISAVSVAERVAFER R A A P R R 2 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 1 0 0 2 0 0 12 0 1356.682 Q08211 Q08211 435 446 DHX9 ATP-dependent RNA helicase A yes yes 2 6.9923E-05 172.11 By MS/MS 2 1 1 1 2 3406100 3406100 0 70 1307 74 137;138 118;119 118 2 175260 0 AAEDLFVNIR SCLSLFRDEVFHIHKAAEDLFVNIRGYNKR FHIHKAAEDLFVNIRGYNKRINDIRECKEA K A A I R G 2 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1146.6033 Q9Y2A7 Q9Y2A7 306 315 NCKAP1 Nck-associated protein 1 yes yes 2 2.9363E-05 161.79 By MS/MS 4 0 1 1 952990 952990 0 71 2824 75 139 120 120 1 89683 0 AAEEEKK ELEAVRKKLEEAASRAAEEEKKRLQTQVEL KLEEAASRAAEEEKKRLQTQVELQARFSTE R A A K K R 2 0 0 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 1 803.4025 Q9UH65 Q9UH65 369 375 SWAP70 Switch-associated protein 70 yes no 1 0.053995 37.646 By MS/MS 5 0 1 1 2909900 2909900 0 72 2726 76 140 121 121 0 29185 0 AAEEIGIK GNRDDSNLYINVKLKAAEEIGIKATHIKLP YINVKLKAAEEIGIKATHIKLPRTTTESEV K A A I K A 2 0 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 829.45453 P11586 P11586 59 66 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.02498 94.114 By MS/MS 4 0 1 1 1314200 1314200 0 73 582 77 141 122 122 1 123670 0 AAELETDIR QAVRHLPQSVRIYIRAAELETDIRAKKRVL VRIYIRAAELETDIRAKKRVLRKALEHVPN R A A I R A 2 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1016.5138 O94906 O94906 379 387 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0017819 124.08 By MS/MS 4 0 1 1 3063400 3063400 0 74 376 78 142 123 123 1 288280 0 AAELFVETIAK DVTLAGQEAIFILARAAELFVETIAKDAYC ILARAAELFVETIAKDAYCCAQQGKRKTLQ R A A A K D 3 0 0 0 0 0 2 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 11 0 1190.6547 Q9NR33 Q9NR33 70 80 POLE4 DNA polymerase epsilon subunit 4 yes yes 2 0.0026683 127.76 By MS/MS 9 0 1 1 144790 144790 0 75 2547 79 143 124 124 1 2849.5 0 AAELIANSLATAGDGLIELR QQKKAAIISAEGDSKAAELIANSLATAGDG ANSLATAGDGLIELRKLEAAEDIAYQLSRS K A A L R K 5 1 1 1 0 0 2 2 0 2 4 0 0 0 0 1 1 0 0 0 0 0 20 0 1997.0793 P35232 P35232 220 239 PHB Prohibitin yes yes 2;3 1.6629E-05 173.19 By MS/MS 8 0 2 2 302130 302130 0 76 814 80 144;145 125;126;127;128 125 4 3814.3 0 AAELLAR EKYGTDIIMGLSSTRAAELLARDGPNSLTP IMGLSSTRAAELLARDGPNSLTPPKQTPEI R A A A R D 3 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 742.43374 P54707 P54707 83 89 ATP12A Potassium-transporting ATPase alpha chain 2 yes no 2 0.016097 119.57 By MS/MS By matching 4.4 1.02 1 2 1 1 4 1 5965400 5839500 125900 77 1046 81 146;147;148;149;150 129;130 129 2 378400 268250 AAELSIK RDSGNSGLAEKCWMKAAELSIKFLPPQRNM LAEKCWMKAAELSIKFLPPQRNMEVVLAVG K A A I K F 2 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 730.4225 Q9UG01 Q9UG01 1318 1324 IFT172 Intraflagellar transport protein 172 homolog yes yes 2 0.012522 128.86 By MS/MS 4 0 1 1 4144200 4144200 0 78 2717 82 151 131 131 1 389990 0 AAEQYTPK QELSFAARSFYYKLRAAEQYTPKAKYHGNV SFYYKLRAAEQYTPKAKYHGNVMLLRAKTG R A A P K A 2 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 8 0 906.4447 P49327 P49327 2429 2436 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0066583 117.81 By MS/MS By MS/MS 4.67 2.98 1 2 1 1 1 1 1 1 8 1 15660000 15595000 64862 79 946 83 152;153;154;155;156;157;158;159;160 132;133;134;135;136;137 134 6 2534700 91728 AAESPDQKDTDGGPKEEESPV ETSIDVAGKPNEVTKAAESPDQKDTDGGPK QKDTDGGPKEEESPV_______________ K A A P V - 2 0 0 3 0 1 4 2 0 0 0 2 0 0 3 2 1 0 0 1 0 0 21 2 2184.9659 P53985 P53985 480 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2;3 3.2086E-05 162.76 By MS/MS By matching 1.86 0.833 3 2 2 6 1 5703100 5678800 24335 80 1038 84 161;162;163;164;165;166;167 138;139;140;141;142 142 5 1516100 24335 AAETCQEPK VYVDSKDPVSSLQVKAAETCQEPKEFRLPK SSLQVKAAETCQEPKEFRLPKDHHFDMINI K A A P K E 2 0 0 0 1 1 2 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 9 0 1032.4546 Q9P032 Q9P032 83 91 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.011368 98.044 By MS/MS 9 0 1 1 1648400 1648400 0 81 2660 85 168 143 143 1 32441 0 AAEVLINQLDR AKLEAEVSKAQETIKAAEVLINQLDREHKR ETIKAAEVLINQLDREHKRWNAQVVEITEE K A A D R E 2 1 1 1 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1240.6776 Q8NCM8 Q8NCM8 3171 3181 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0031907 108.7 By MS/MS 1.5 0.5 1 1 2 159360 159360 0 82 1952 86 169;170 144 144 1 47000 0 AAFALGGLGSGFASNR AQAAAERLGYPVLVRAAFALGGLGSGFASN AFALGGLGSGFASNREELSALVAPAFAHTS R A A N R E 4 1 1 0 0 0 0 4 0 0 2 0 0 2 0 2 0 0 0 0 0 0 16 0 1494.7579 P27708 P27708 556 571 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 9.2385E-05 187.58 By MS/MS 2 0 1 1 75833 75833 0 83 745 87 171 145;146 146 2 25650 0 AAFGEEVDAVDTGISR LEKEGSLLSKQEESKAAFGEEVDAVDTGIS AFGEEVDAVDTGISRETSSDVALASHILTA K A A S R E 3 1 0 2 0 0 2 2 0 1 0 0 0 1 0 1 1 0 0 2 0 0 16 0 1635.774 O00273 O00273 214 229 DFFA DNA fragmentation factor subunit alpha yes yes 2 7.7807E-24 273.24 By MS/MS 7 0 1 1 690610 690610 0 84 97 88 172 147 147 1 10841 0 AAFGGSGGR VSVTSSTISSNVASKAAFGGSGGRGSSSGG SNVASKAAFGGSGGRGSSSGGGYSSGSSSY K A A G R G 2 1 0 0 0 0 0 4 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 778.3722 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 516 524 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 5.391E-05 178.99 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 160280000 52105000 108180000 + 85 55 89 173;174;175;176;177;178;179;180;181;182;183;184;185;186;187;188;189;190;191 148;149;150;151;152;153;154;155;156;157;158;159;160;161;162;163;164;165;166;167;168 148 21 3946000 72522000 AAFGGSGGRGSSSGGGYSSGSSSYGSGGR VSVTSSTISSNVASKAAFGGSGGRGSSSGG GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS K A A G R Q 2 2 0 0 0 0 0 12 0 0 0 0 0 1 0 10 0 0 2 0 0 0 29 1 2500.0599 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 516 544 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 5.7735E-19 197.48 By MS/MS By MS/MS 4.8 2.88 4 3 2 4 3 2 1 2 2 2 10 15 18249000 6979300 11269000 + 86 55 90 192;193;194;195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210;211;212;213;214;215;216 169;170;171;172;173;174;175;176;177;178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193;194;195;196;197;198;199 169 31 543070 11969000 AAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSR VSVTSSTISSNVASKAAFGGSGGRGSSSGG GSSSYGSGGRQSGSRGGSGGGGSISGGGYG K A A S R G 2 3 0 0 0 1 0 13 0 0 0 0 0 1 0 12 0 0 2 0 0 0 34 2 3015.3051 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 516 549 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 0.030966 28.905 By MS/MS 1.5 0.5 1 1 2 213300 0 213300 + 87 55 91 217;218 200 200 1 0 276810 AAFGLSEAGFNTACVTK EFDAVVVGAGGAGLRAAFGLSEAGFNTACV FGLSEAGFNTACVTKLFPTRSHTVAAQGGI R A A T K L 4 0 1 0 1 0 1 2 0 0 1 1 0 2 0 1 2 0 0 1 0 0 17 0 1742.8298 P31040 P31040 76 92 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 5.1989E-24 271.04 By MS/MS 5.5 0.5 1 1 2 1533700 1533700 0 88 783 92 219;220 201 201 1 13837 0 AAFLGCLTDVR RVARERLGHHLQGLRAAFLGCLTDVRQALA QGLRAAFLGCLTDVRQALAAPRVAGKEGPG R A A V R Q 2 1 0 1 1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 11 0 1221.6176 Q9UID3 Q9UID3 416 426 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.00063532 128.86 By MS/MS 4.5 0.5 1 1 2 1897200 1897200 0 89 2741 93 221;222 202;203 203 2 133400 0 AAFLNFFR PLSSEPPAAKASAVRAAFLNFFRDRHGHRL AKASAVRAAFLNFFRDRHGHRLVPSASVRP R A A F R D 2 1 1 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 8 0 984.51814 Q5JTZ9 Q5JTZ9 44 51 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0095211 111.28 By MS/MS 4 0 1 1 67083 67083 0 90 1613 94 223 204 204 1 6313 0 AAFLQYCR KNETIAQEDKIKLLKAAFLQYCRKDLGHAQ DKIKLLKAAFLQYCRKDLGHAQMVVDELFS K A A C R K 2 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1027.4909 Q8WUM0 Q8WUM0 524 531 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.005242 124.37 By MS/MS 3 0 1 1 423480 423480 0 91 2017 95 224 205 205 1 7748.5 0 AAFQLGSPWR EGDKEDVDKAVKAARAAFQLGSPWRRMDAS VKAARAAFQLGSPWRRMDASHRGRLLNRLA R A A W R R 2 1 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 10 0 1131.5825 P05091 P05091 85 94 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.054002 70.399 By MS/MS 6 0 1 1 842120 842120 0 92 485 96 225 206 206 1 5788.9 0 AAFQSLLDAQADEAVLDHPDLK DPRSFDSNAFTLLLRAAFQSLLDAQADEAV DAQADEAVLDHPDLKHIDPVVLKHCHAAAA R A A L K H 5 0 0 4 0 2 1 0 1 0 4 1 0 1 1 1 0 0 0 1 0 0 22 0 2366.1754 Q9UBI1 Q9UBI1 31 52 COMMD3 COMM domain-containing protein 3 yes yes 3 0.0005296 93.753 By MS/MS 9 0 1 1 105080 105080 0 93 2698 97 226 207 207 1 2068 0 AAFTAFEEAQLPR VAEEAADRHPERRMRAAFTAFEEAQLPRLK MRAAFTAFEEAQLPRLKQENPNMRLSQLKQ R A A P R L 4 1 0 0 0 1 2 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 13 0 1449.7252 Q96CT7 Q96CT7 171 183 CCDC124 Coiled-coil domain-containing protein 124 yes yes 2 2.1486E-05 198.62 By MS/MS 8 0 1 1 1134700 1134700 0 94 2127 98 227 208 208 1 14325 0 AAFTECCQAADK YFYAPELLFFAKRYKAAFTECCQAADKAAC RYKAAFTECCQAADKAACLLPKLDELRDEG K A A D K A 4 0 0 1 2 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 12 0 1370.5595 CON__P02768-1;P02768 CON__P02768-1 187 198 ALB Serum albumin yes no 2 0.017162 101.3 By MS/MS 5.5 0.5 1 1 2 102940 0 102940 + 95 42 99 228;229 209;210 210 2 0 94803 AAFVLPEFAR VAQMQLKYYNSDVHRAAFVLPEFARKALND SDVHRAAFVLPEFARKALNDVS________ R A A A R K 3 1 0 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 10 0 1119.6077 P19623 P19623 286 295 SRM Spermidine synthase yes yes 2 0.037566 78.334 By MS/MS 8 0 1 1 1485400 1485400 0 96 664 100 230 211 211 1 18753 0 AAGAGAGSAPR ______________________________ ______________________________ M A A P R W 5 1 0 0 0 0 0 3 0 0 0 0 0 0 1 1 0 0 0 0 0 0 11 0 884.44643 Q8WUD6 Q8WUD6 2 12 CHPT1 Cholinephosphotransferase 1 yes yes 2 0.0010328 123.21 By MS/MS 1 0 1 1 88286 88286 0 97 2015 101 231 212 212 1 21274 0 AAGALLNGPPQFSTAPEIK VNPPSSPTPSFSDAKAAGALLNGPPQFSTA LLNGPPQFSTAPEIKAPEPLSSLKSMAERA K A A I K A 4 0 1 0 0 1 1 2 0 1 2 1 0 1 3 1 1 0 0 0 0 0 19 0 1880.9996 O75175 O75175 517 535 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 2 6.3572E-05 177.93 By MS/MS 4 0 1 1 1215200 1215200 0 98 303 102 232 213 213 1 114360 0 AAGDSNLKR VAFTGSTEVGHLIQKAAGDSNLKRVTLELG GHLIQKAAGDSNLKRVTLELGGKSPSIVLA K A A K R V 2 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 1 930.48829 P30837 P30837 273 281 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.010269 109.48 By MS/MS 6 0 1 1 1429700 1429700 0 99 780 103 233 214 214 0 9828.3 0 AAGFKDPLLASGTDGVGTK CKVDLGGFAGLFDLKAAGFKDPLLASGTDG KDPLLASGTDGVGTKLKIAQLCNKHDTIGQ K A A T K L 3 0 0 2 0 0 0 4 0 0 2 2 0 1 1 1 2 0 0 1 0 0 19 1 1803.9367 P22102 P22102 481 499 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 3 0.031954 62.916 By MS/MS 4.5 0.5 1 1 2 1139500 1139500 0 100 688 104 234;235 215 215 1 72014 0 AAGGAVAAAPECR ______________________________ ______________________________ M A A C R L 6 1 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 13 0 1199.5717 Q9UL63 Q9UL63 2 14 MKLN1 Muskelin yes yes 2 0.0046399 106.2 By MS/MS By matching 5 0 2 1 1 1859400 1824200 35284 101 2771 105 236;237 216 216 1 18295 29631 AAGGDHGSPDSYRSPLASR ______________________________ DHGSPDSYRSPLASRYASPEMCFVFSDRYK M A A S R Y 3 2 0 2 0 0 0 3 1 0 1 0 0 0 2 4 0 0 1 0 0 0 19 1 1899.8824 P30566 P30566 2 20 ADSL Adenylosuccinate lyase yes yes 3 0.008638 66.673 By MS/MS 6.5 0.5 1 1 2 1887200 1887200 0 102 776 106 238;239 217 217 1 14867 0 AAGHPGDPESQQR DVLDKASSLIEEAKKAAGHPGDPESQQRLA KKAAGHPGDPESQQRLAQVAKAVTQALNRC K A A Q R L 2 1 0 1 0 2 1 2 1 0 0 0 0 0 2 1 0 0 0 0 0 0 13 0 1348.612 Q9Y490 Q9Y490 1172 1184 TLN1 Talin-1 yes yes 3 0.00027479 150.09 By MS/MS 2.5 0.5 1 1 2 544940 544940 0 103 2888 107 240;241 218 218 1 146490 0 AAGLQAEIGQVK ELSSKEAQWEELKKKAAGLQAEIGQVKQEL KKKAAGLQAEIGQVKQELSRKDTELLALQT K A A V K Q 3 0 0 0 0 2 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 12 0 1183.6561 Q8IUD2 Q8IUD2 461 472 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 2 0.026959 83.862 By MS/MS 3 0 1 1 138920 138920 0 104 1858 108 242 219 219 0 2541.9 0 AAGLVSDLDADSGLTLSR SEQEEYAKEAQQSLRAAGLVSDLDADSGLT LVSDLDADSGLTLSRRIRRAQLAHYNFQFV R A A S R R 3 1 0 3 0 0 0 2 0 0 4 0 0 0 0 3 1 0 0 1 0 0 18 0 1759.8952 Q9BW92 Q9BW92 638 655 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 4.671E-17 298.91 By MS/MS 5 0 1 1 1019400 1019400 0 105 2346 109 243 220 220 1 10224 0 AAGPSLSHTSGGTQSK STVSKAYGASKTFGKAAGPSLSHTSGGTQS AGPSLSHTSGGTQSKVVPIASLTPYQSKWT K A A S K V 2 0 0 0 0 1 0 3 1 0 1 1 0 0 1 4 2 0 0 0 0 0 16 0 1484.7219 P27694 P27694 168 183 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.0043672 100.02 By MS/MS 5.5 0.5 1 1 2 1400300 1400300 0 106 744 110 244;245 221 221 1 12979 0 AAGTAAALAFLSQESR ______________________________ AGTAAALAFLSQESRTRAGGVGGLRVPAPV M A A S R T 6 1 0 0 0 1 1 1 0 0 2 0 0 1 0 2 1 0 0 0 0 0 16 0 1562.8053 O75607 O75607 2 17 NPM3 Nucleoplasmin-3 yes yes 2 2.1432E-05 200.21 By MS/MS 9.5 0.5 1 1 2 311170 311170 0 107 337 111 246;247 222 222 1 7592.4 0 AAGTCGVLLR NNVESEPGRGAQYIRAAGTCGVLLRKVNGT AQYIRAAGTCGVLLRKVNGTAIIQLPSKRQ R A A L R K 2 1 0 0 1 0 0 2 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1016.5437 Q5T653 Q5T653 209 218 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 2 0.0002702 120.87 By MS/MS 8 0 1 1 3734200 3734200 0 108 1634 112 248 223 223 1 47144 0 AAGTDGSDFQHR ______________________________ GPRAAGTDGSDFQHRERVAMHYQMSVTLKY R A A H R E 2 1 0 2 0 1 0 2 1 0 0 0 0 1 0 1 1 0 0 0 0 0 12 0 1260.5483 Q8N5M9 Q8N5M9 9 20 JAGN1 Protein jagunal homolog 1 yes yes 2 1.1518E-06 205.59 By MS/MS 9 0 1 1 703830 703830 0 109 1924 113 249 224 224 1 13851 0 AAGTLYTYPENWR ______________________________ ______________________________ M A A W R A 2 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 13 0 1540.731 P26641 P26641 2 14 EEF1G Elongation factor 1-gamma yes yes 2 3.843E-08 221.5 By MS/MS 6 1.41 1 1 1 1 1 5 23060000 23060000 0 110 736 114 250;251;252;253;254 225;226;227 225 3 181450 0 AAGTSSYWEDLRK ______________________________ ______________________________ M A A R K Q 2 1 0 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 1 0 0 0 13 1 1482.7103 O95249 O95249 2 14 GOSR1 Golgi SNAP receptor complex member 1 yes yes 2 4.109E-05 181.53 By MS/MS 7.5 0.5 1 1 2 3592000 3592000 0 111 399 115 255;256 228 228 1 46195 0 AAGVEAAAEVAATEIK ______________________________ AGVEAAAEVAATEIKMEEESGAPGVPSGNG M A A I K M 7 0 0 0 0 0 3 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 16 0 1499.7831 P52272 P52272 2 17 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 7.5599E-16 248.32 By MS/MS By MS/MS 5.8 1.72 1 2 1 1 4 1 1405700 1317300 88417 112 1012 116 257;258;259;260;261 229;230;231;232;233;234 229 6 20505 74251 AAGVVLEMIR RQASQGMVGQLAARRAAGVVLEMIREGKIA LAARRAAGVVLEMIREGKIAGRAVLIAGQP R A A I R E 2 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 2 0 0 10 0 1057.5954 Q9Y230 Q9Y230 55 64 RUVBL2 RuvB-like 2 yes yes 2 0.00036696 147.51 By MS/MS 6 0 1 1 6416000 6416000 0 113 2810 117 262 235 235 1 44105 0 AAHFFSTLK VKVSKYWYLGPLKIKAAHFFSTLKEWPQTH GPLKIKAAHFFSTLKEWPQTHQASISYTGP K A A L K E 2 0 0 0 0 0 0 0 1 0 1 1 0 2 0 1 1 0 0 0 0 0 9 0 1020.5393 Q53H12 Q53H12 234 242 AGK Acylglycerol kinase, mitochondrial yes yes 3 0.012072 109.48 By MS/MS 7 0 1 1 1416800 1416800 0 114 1589 118 263 236 236 1 22241 0 AAHSEGNTTAGLDMR DNAGYDSADLVAQLRAAHSEGNTTAGLDMR AAHSEGNTTAGLDMREGTIGDMAILGITES R A A M R E 3 1 1 1 0 0 1 2 1 0 1 0 1 0 0 1 2 0 0 0 0 0 15 0 1529.6893 P78371 P78371 467 481 CCT2 T-complex protein 1 subunit beta yes yes 2;3 5.4371E-07 212.68 By MS/MS By matching 6.29 0.452 5 2 6 1 14339000 14269000 69708 115 1222 119;120 264;265;266;267;268;269;270 237;238;239;240 240 711 4 102810 71431 AAIEAFNK AYLSGMLRFEHQEWKAAIEAFNKCKTIYEK FEHQEWKAAIEAFNKCKTIYEKLASAFTEE K A A N K C 3 0 1 0 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 862.45487 Q9UHB9 Q9UHB9 206 213 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0049312 125.81 By MS/MS 5 0 1 1 3589300 3589300 0 116 2728 121 271 241 241 1 35998 0 AAIIADSSTFR SSPTFLRALMTAVCKAAIIADSSTFRVDTA AVCKAAIIADSSTFRVDTAVIKQRVPILLK K A A F R V 3 1 0 1 0 0 0 0 0 2 0 0 0 1 0 2 1 0 0 0 0 0 11 0 1150.5982 O43432 O43432 1473 1483 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 3.0258E-05 157.99 By MS/MS 2.5 0.5 1 1 2 1201100 1201100 0 117 210 122 272;273 242 242 1 337790 0 AAIISAEGDSK ERARFVVEKAEQQKKAAIISAEGDSKAAEL QQKKAAIISAEGDSKAAELIANSLATAGDG K A A S K A 3 0 0 1 0 0 1 1 0 2 0 1 0 0 0 2 0 0 0 0 0 0 11 0 1060.5401 P35232 P35232 209 219 PHB Prohibitin yes yes 2 0.0018999 112.11 By MS/MS 9 0.816 1 1 1 3 22889000 22889000 0 118 814 123 274;275;276 243;244 243 2 302370 0 AAILPTSIFLTNK PSNHVIDRWLGEPIKAAILPTSIFLTNKKG IKAAILPTSIFLTNKKGFPVLSKMHQRLIF K A A N K K 2 0 1 0 0 0 0 0 0 2 2 1 0 1 1 1 2 0 0 0 0 0 13 0 1387.8075 O14744 O14744 228 240 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0001124 172.21 By MS/MS By matching 5.75 0.829 2 1 1 3 1 1336000 1210000 126000 119 137 124 277;278;279;280 245;246 245 2 11722 105810 AAILQTEVDALR HIEVLKESLTAKEQRAAILQTEVDALRLRL EQRAAILQTEVDALRLRLEEKETMLNKKTK R A A L R L 3 1 0 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1298.7194 Q8IUD2;O15083 Q8IUD2 517 528 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 yes no 2 0.016443 80.737 By MS/MS 3 0 1 1 99322 99322 0 120 1858 125 281 247 247 0 1817.3 0 AAISLVPEVPK ALANQCLSQADAFFKAAISLVPEVPKMINI AFFKAAISLVPEVPKMINIDGKMRPSESFL K A A P K M 2 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 0 0 0 2 0 0 11 0 1122.6649 Q7Z3J2 Q7Z3J2 747 757 C16orf62 UPF0505 protein C16orf62 yes yes 2 0.035424 81.338 By MS/MS 4 0 1 1 438190 438190 0 121 1784 126 282 248 248 0 41236 0 AAISSGIEDPVPTLHLTER KAPEPLSSLKSMAERAAISSGIEDPVPTLH SGIEDPVPTLHLTERDIILSSTSAPPASAQ R A A E R D 2 1 0 1 0 0 2 1 1 2 2 0 0 0 2 2 2 0 0 1 0 0 19 0 2005.048 O75175 O75175 550 568 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 3 0.015739 75.574 By MS/MS 4 0 1 1 833540 833540 0 122 303 127 283 249 249 1 78441 0 AAKQPPPLMKK ______________________________ ______________________________ M A A K K H 2 0 0 0 0 1 0 0 0 0 1 3 1 0 3 0 0 0 0 0 0 0 11 2 1207.7111 O14683 O14683 2 12 TP53I11 Tumor protein p53-inducible protein 11 yes yes 3 0.040823 45.368 By MS/MS 4 0 1 1 1106500 1106500 0 123 133 128 284 250 250 77 1 104130 0 AAKVFESIGK ______________________________ ______________________________ M A A G K F 2 0 0 0 0 0 1 1 0 1 0 2 0 1 0 1 0 0 0 1 0 0 10 1 1048.5917 P35232 P35232 2 11 PHB Prohibitin yes yes 2 0.0081065 98.04 By MS/MS By matching 8 0 2 1 1 934620 909120 25504 124 814 129 285;286 251 251 1 11478 34417 AALAPLPPLPAQFK ______________________________ MAALAPLPPLPAQFKSIQHHLRTAQEHDKR M A A F K S 4 0 0 0 0 1 0 0 0 0 3 1 0 1 4 0 0 0 0 0 0 0 14 0 1432.8442 Q9NP79 Q9NP79 2 15 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 2 0.010456 91.867 By MS/MS 7 0 1 1 596290 596290 0 125 2526 130 287 252 252 1 9360.6 0 AALEAAAAAAPER ______________________________ RRAALEAAAAAAPERGGGSCVLCCGDLEAT R A A E R G 8 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 13 0 1210.6306 Q86UK7 Q86UK7 12 24 ZNF598 Zinc finger protein 598 yes yes 2 0.0011387 123.62 By MS/MS 5 0.816 1 1 1 3 2437800 2437800 0 126 1821 131 288;289;290 253 253 1 158840 0 AALEALGSCLNNK CRGLELIASENFCSRAALEALGSCLNNKYS SRAALEALGSCLNNKYSEGYPGKRYYGGAE R A A N K Y 3 0 2 0 1 0 1 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1359.6816 P34897 P34897 83 95 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 1.7024E-11 233.84 By MS/MS 6.5 0.5 1 1 2 4106100 4106100 0 127 809 132 291;292 254 254 1 31820 0 AALEAVGGTVVLE EIKANVAKAEAEKIKAALEAVGGTVVLE__ IKAALEAVGGTVVLE_______________ K A A L E - 3 0 0 0 0 0 2 2 0 0 2 0 0 0 0 0 1 0 0 3 0 0 13 0 1227.6711 P52815 P52815 186 198 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 0.00030205 152.11 By MS/MS By MS/MS 9 0 2 1 1 5507000 5397400 109580 128 1024 133 293;294 255;256 256 2 106220 249870 AALEEFSR LASVVDPRVASAAAKAALEEFSRVREEVPL VASAAAKAALEEFSRVREEVPLELVEAHVK K A A S R V 2 1 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 921.4556 Q92922 Q92922 717 724 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.027723 91.069 By MS/MS 3.5 0.5 1 1 2 1935300 1935300 0 129 2079 134 295;296 257 257 1 72824 0 AALEEGSSQPTER SASRETLLPSHPPRRAALEEGSSQPTERLF RRAALEEGSSQPTERLFGQVSGGGLPTGDY R A A E R L 2 1 0 0 0 1 3 1 0 0 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1373.6423 Q96RT7 Q96RT7 1012 1024 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 5.0851E-12 244 By MS/MS 2.5 0.5 1 1 2 594520 594520 0 130 2226 135 297;298 258 258 1 142660 0 AALEELQR DQIIELQNAQDAIYRAALEELQRRLQFEEK AQDAIYRAALEELQRRLQFEEKKKQREIEG R A A Q R R 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 928.49779 Q96CW5 Q96CW5 795 802 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 0.027499 91.318 By MS/MS 4 0 1 1 2678600 2678600 0 131 2128 136 299 259 259 1 252080 0 AALEEVYPDLTPEETRR QGVALLPFVDERRLRAALEEVYPDLTPEET LEEVYPDLTPEETRRNSLGGDVLFVGKHHP R A A R R N 2 2 0 1 0 0 4 0 0 0 2 0 0 0 2 0 2 0 1 1 0 0 17 1 1987.9851 Q9H0D6 Q9H0D6 660 676 XRN2 5-3 exoribonuclease 2 yes yes 3 0.030157 67.115 By MS/MS 4.5 0.5 1 1 2 1111400 1111400 0 132 2407 137 300;301 260;261 261 2 91096 0 AALEKSLEDTK VQELEIELQSQLSKKAALEKSLEDTKNRYC LSKKAALEKSLEDTKNRYCGQLQMIQEQIS K A A T K N 2 0 0 1 0 0 2 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 11 1 1203.6347 P35527;CON__P35527 P35527 392 402 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.074913 99.013 By MS/MS 4 0 1 1 0 0 0 + 133 822 138 302 262 262 1 0 0 AALETDENLLLCAPTGAGK EGFKTLNRIQSKLYRAALETDENLLLCAPT TDENLLLCAPTGAGKTNVALMCMLREIGKH R A A G K T 4 0 1 1 1 0 2 2 0 0 4 1 0 0 1 0 2 0 0 0 0 0 19 0 1942.967 O75643 O75643 491 509 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.4861E-17 263.15 By MS/MS 1.5 0.5 1 1 2 473760 473760 0 134 340 139 303;304 263;264 263 2 137180 0 AALEYLEDIDLK LLLANTDVFLSKPQKAALEYLEDIDLKTLE PQKAALEYLEDIDLKTLEKEPRTFKAKELW K A A L K T 2 0 0 2 0 0 2 0 0 1 3 1 0 0 0 0 0 0 1 0 0 0 12 0 1391.7184 Q9BRX8 Q9BRX8 44 55 FAM213A Redox-regulatory protein FAM213A yes yes 2 4.0097E-05 147.74 By MS/MS 9 0 1 1 154120 154120 0 135 2302 140 305 265 265 0 3033.2 0 AALEYLGSFDHYAT PAMVQTEDQYQLCYRAALEYLGSFDHYAT_ RAALEYLGSFDHYAT_______________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 P10586;P23468 P10586 1894 1907 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Receptor-type tyrosine-protein phosphatase delta yes no 2 0.0049764 104.05 By MS/MS 5 0 1 1 169850 169850 0 136 562 141 306 266 266 1 1703.5 0 AALGHLAGEAAAAPGPGTPCASR ______________________________ EAAAAPGPGTPCASRGARLPGPVSSARNPS M A A S R G 8 1 0 0 1 0 1 4 1 0 2 0 0 0 3 1 1 0 0 0 0 0 23 0 2102.0327 Q9H7E9 Q9H7E9 2 24 C8orf33 UPF0488 protein C8orf33 yes yes 3 1.3108E-06 119.5 By MS/MS 8 0 1 1 2945500 2945500 0 137 2463 142 307 267 267 1 37187 0 AALGPSSQNVTEYVVR ______________________________ ALGPSSQNVTEYVVRVPKNTTKKYNIMAFN M A A V R V 2 1 1 0 0 1 1 1 0 0 1 0 0 0 1 2 1 0 1 3 0 0 16 0 1689.8686 P35269 P35269 2 17 GTF2F1 General transcription factor IIF subunit 1 yes yes 2 0.00012152 184.87 By MS/MS 5 0 1 1 1449800 1449800 0 138 820 143 308 268 268 1 14541 0 AALGSPSHTFR ______________________________ ______________________________ M A A F R G 2 1 0 0 0 0 0 1 1 0 1 0 0 1 1 2 1 0 0 0 0 0 11 0 1142.5833 Q96HJ9 Q96HJ9 2 12 C7orf55 UPF0562 protein C7orf55 yes yes 2 0.00074736 128.27 By MS/MS 10 0 1 1 2644400 2644400 0 139 2165 144 309 269 269 1 142520 0 AALKLEPSNK LAQQGEYSEAIPILRAALKLEPSNKTIHAE IPILRAALKLEPSNKTIHAELSKLVKKHAA R A A N K T 2 0 1 0 0 0 1 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 10 1 1069.6132 Q14318 Q14318 331 340 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 3 0.01062 103.26 By MS/MS 6 0 1 1 1951700 1951700 0 140 1438 145 310 270 270 1 13417 0 AALNALQPPEFR ______________________________ PDKAALNALQPPEFRNESSLASTLKTLLFF K A A F R N 3 1 1 0 0 1 1 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 12 0 1325.7092 Q3ZAQ7 Q3ZAQ7 7 18 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 0.018659 85.958 By MS/MS 10 0 1 1 1796400 1796400 0 141 1579 146 311 271 271 1 96820 0 AALNELLK LCALGLAMQDATLSKAALNELLKHIKHKDS QDATLSKAALNELLKHIKHKDSNYQRCLLT K A A L K H 2 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 870.51747 Q6PGP7 Q6PGP7 1143 1150 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.013109 107.29 By MS/MS 3 0 1 1 1000400 1000400 0 142 1716 147 312 272 272 1 18305 0 AALPLTTSDTK QVVNQVWEAADVLIKAALPLTTSDTKTVSE VLIKAALPLTTSDTKTVSEWISQMATLPQA K A A T K T 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 11 0 1116.6027 Q7Z6Z7 Q7Z6Z7 1498 1508 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.028238 81.338 By MS/MS 1 0 1 1 443500 443500 0 143 1802 148 313 273 273 1 106870 0 AALQEELQLCK FCFTPHTEEGCLSERAALQEELQLCKGLVQ LSERAALQEELQLCKGLVQALQTKVTQQGL R A A C K G 2 0 0 0 1 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1301.6649 P49327 P49327 1132 1142 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.5918E-09 205.59 By MS/MS By MS/MS 4.33 2.78 2 2 2 1 1 1 1 1 1 9 3 34826000 34391000 434730 144 946 149 314;315;316;317;318;319;320;321;322;323;324;325 274;275;276;277;278;279;280;281;282;283;284;285;286 279 13 6076300 448260 AALQELLSK AVVSERLKIRGSLARAALQELLSKGLIKLV RGSLARAALQELLSKGLIKLVSKHRAQVIY R A A S K G 2 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 971.56515 P62851 P62851 86 94 RPS25 40S ribosomal protein S25 yes yes 2 3.7162E-05 174.02 By MS/MS By MS/MS 9.33 0.745 1 2 3 4 2 112440000 112150000 291860 145 1176 150 326;327;328;329;330;331 287;288;289;290;291;292;293;294 289 8 3332300 579240 AALQELLSKGLIK AVVSERLKIRGSLARAALQELLSKGLIKLV ARAALQELLSKGLIKLVSKHRAQVIYTRNT R A A I K L 2 0 0 0 0 1 1 1 0 1 4 2 0 0 0 1 0 0 0 0 0 0 13 1 1382.8497 P62851 P62851 86 98 RPS25 40S ribosomal protein S25 yes yes 2;3 0.00098687 134.75 By MS/MS 9 0 2 2 467320 467320 0 146 1176 151 332;333 295;296 296 2 9196.9 0 AALRPLVKPK ______________________________ ______________________________ M A A P K I 2 1 0 0 0 0 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 0 10 2 1091.7179 P62910 P62910 2 11 RPL32 60S ribosomal protein L32 yes yes 3 0.048191 96.668 By MS/MS 9 0 1 1 1046700 1046700 0 147 1185 152 334 297 297 1 20600 0 AALRQPQVAELLAEAR ______________________________ ALRQPQVAELLAEARRAFREEFGAEPELAV M A A A R R 5 2 0 0 0 2 2 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 16 1 1734.9741 P51570 P51570 2 17 GALK1 Galactokinase yes yes 2;3 0.00048343 163.33 By MS/MS 7 0 2 2 224420 224420 0 148 997 153 335;336 298;299 298 2 3523 0 AALSASEGEEVPQDK RISGLGLTPEQKQKKAALSASEGEEVPQDK AALSASEGEEVPQDKAPSHVPFLLIGGGTA K A A D K A 3 0 0 1 0 1 3 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1529.7209 O95831 O95831 113 127 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 3.5744E-11 239.48 By MS/MS 7.5 2.5 1 1 2 5871900 5871900 0 149 429 154 337;338 300;301 300 2 88887 0 AALSEEELEK AVKREAALPPVSPLKAALSEEELEKKSKAI VSPLKAALSEEELEKKSKAIIEEYLHLNDM K A A E K K 2 0 0 0 0 0 4 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1117.5503 Q04637 Q04637 1235 1244 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 2.2925E-08 200.86 By MS/MS 2 0 1 1 6779400 6779400 0 150 1291 155 339 302 302 1 2293100 0 AALSEEELEKK AVKREAALPPVSPLKAALSEEELEKKSKAI SPLKAALSEEELEKKSKAIIEEYLHLNDMK K A A K K S 2 0 0 0 0 0 4 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1245.6452 Q04637 Q04637 1235 1245 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0010459 135.43 By MS/MS 3 1.41 1 1 1 1 1 5 3036400 3036400 0 151 1291 156 340;341;342;343;344 303;304;305 305 3 362160 0 AALSEEELER ESAKPEISAMSAHDKAALSEEELERKSKSI SAHDKAALSEEELERKSKSIIDEFLHINDF K A A E R K 2 1 0 0 0 0 4 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1145.5564 O43432 O43432 1215 1224 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00056598 132.01 By MS/MS 2 0 1 1 514030 514030 0 152 210 157 345 306 306 1 173870 0 AALTGLLHR SGTSYKDLMPHDLARAALTGLLHRTSVPKE PHDLARAALTGLLHRTSVPKEVVDYIIFGT R A A H R T 2 1 0 0 0 0 0 1 1 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 950.56615 P55084 P55084 82 90 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2;3 0.0094224 95.815 By MS/MS By matching 6.2 0.748 1 2 2 4 1 10651000 10613000 37543 153 1055 158 346;347;348;349;350 307;308 308 2 105590 31528 AALTSAR ESKTYHALSNLPKARAALTSARTTANAIYC LSNLPKARAALTSARTTANAIYCPPKLQAT R A A A R T 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 7 0 688.38679 O00231 O00231 188 194 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.016101 119.56 By MS/MS 7 0 1 1 2543100 2543100 0 154 93 159 351 309 309 1 39922 0 AALVDLEPGTMDSVR NVYYNESSSQKYVPRAALVDLEPGTMDSVR AALVDLEPGTMDSVRSGPFGQLFRPDNFIF R A A V R S 2 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1572.7818 Q9BUF5 Q9BUF5 63 77 TUBB6 Tubulin beta-6 chain yes yes 2 0.00023851 153.54 By MS/MS 6.33 0.471 2 1 3 5258300 5258300 0 155 2324 160;161 352;353;354 310;311;312 311 1073 3 38149 0 AALVDYLDGK PALKGLGECHLMMAKAALVDYLDGKAVDYI LMMAKAALVDYLDGKAVDYIEKALEYFTCA K A A G K A 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 0 1063.555 Q6PGP7 Q6PGP7 682 691 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.016522 88.496 By MS/MS 3 0 1 1 640420 640420 0 156 1716 162 355 313 313 1 11718 0 AALVLEDGSVLR ______________________________ ______________________________ M A A L R G 2 1 0 1 0 0 1 1 0 0 3 0 0 0 0 1 0 0 0 2 0 0 12 0 1241.698 P27708 P27708 2 13 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 3.7744E-05 172.59 By MS/MS 5.06 2.82 2 2 2 1 2 1 2 2 1 1 16 3532700 3532700 0 157 745 163 356;357;358;359;360;361;362;363;364;365;366;367;368;369;370;371 314;315;316;317;318;319;320;321;322;323;324;325;326;327;328;329;330;331;332 318 19 470160 0 AAMAVGGAGGSR ______________________________ ______________________________ M A A S R V 4 1 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 1 0 0 12 0 1003.4869 O14744 O14744 2 13 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 9.9352E-06 163.38 By MS/MS By MS/MS 6.75 2.05 2 1 1 1 3 1149000 0 1149000 158 137 164 372;373;374;375 333;334;335;336 333 81 4 0 1032400 AAMEALVVEVTK LQISHEAAACITGLRAAMEALVVEVTKQPA GLRAAMEALVVEVTKQPAIISQLDPVNERM R A A T K Q 3 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 3 0 0 12 0 1259.6795 Q08211 Q08211 1105 1116 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00066404 131.42 By MS/MS 3 0 1 1 107570 107570 0 159 1307 165 376 337 337 1 1968.3 0 AAMIVNQLSKK LTKLLNDEDPVVVTKAAMIVNQLSKKEASR VVTKAAMIVNQLSKKEASRRALMGSPQLVA K A A K K E 2 0 1 0 0 1 0 0 0 1 1 2 1 0 0 1 0 0 0 1 0 0 11 1 1201.6853 P14923 P14923 162 172 JUP Junction plakoglobin yes yes 3 0.071296 60.691 By MS/MS 3 0 1 1 0 0 0 160 621 166 377 338 338 1 0 0 AAMRKALPR ______________________________ ______________________________ M A A P R R 3 2 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 9 2 1012.5964 P35914 P35914 2 10 HMGCL Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 3 0.041906 45.68 By MS/MS 6 0 1 1 0 0 0 161 830 167 378 339 339 419 1 0 0 AANGVVLATEK ALAAVAGGAPSVGIKAANGVVLATEKKQKS VGIKAANGVVLATEKKQKSILYDERSVHKV K A A E K K 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1071.5924 P25787 P25787 40 50 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.001048 120.63 By MS/MS 8.5 0.5 1 1 2 971050 971050 0 162 725 168 379;380 340 340 1 12910 0 AANNGALPPDLSYIVR FDYFPKPYPNSEAARAANNGALPPDLSYIV ANNGALPPDLSYIVRARHGGEDYVFSLLTG R A A V R A 3 1 2 1 0 0 0 1 0 1 2 0 0 0 2 1 0 0 1 1 0 0 16 0 1669.8788 P08574 P08574 187 202 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 0.00052711 187.62 By MS/MS 8.5 0.5 1 1 2 2226600 2226600 0 163 525 169 381;382 341;342 341 2 29544 0 AANPGCSLEDFVR RMQSACLLSDMESFKAANPGCSLEDFVRWY FKAANPGCSLEDFVRWYSPRDYIEEEVIDE K A A V R W 2 1 1 1 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 13 0 1434.6562 Q15042 Q15042 688 700 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.00018046 179.94 By MS/MS 3.5 0.5 1 1 2 744480 744480 0 164 1479 170 383;384 343 343 1 34177 0 AANSSGQGFQNK ______________________________ ______________________________ M A A N K N 2 0 2 0 0 2 0 2 0 0 0 1 0 1 0 2 0 0 0 0 0 0 12 0 1207.5582 Q9NRY2 Q9NRY2 2 13 INIP SOSS complex subunit C yes yes 2 1.6403E-05 178.54 By MS/MS 10 0 1 1 159470 159470 0 165 2564 171 385 344 344 1 8594.6 0 AAPASSAGASDAR ______________________________ PRAAPASSAGASDARLLAPPGRNPFVHELR R A A A R L 6 1 0 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1130.5316 Q8NF37 Q8NF37 10 22 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.00044996 136.81 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 1917200 1893500 23715 166 1963 172 386;387;388 345;346 346 2 14385 24301 AAPEERDLTQEQTEK ______________________________ AAPEERDLTQEQTEKLLQFQDLTGIESMDQ M A A E K L 2 1 0 1 0 2 4 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 15 1 1743.8275 Q96CS3 Q96CS3 2 16 FAF2 FAS-associated factor 2 yes yes 2 1.2042E-23 270.93 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 40364000 40108000 256110 167 2126 173 389;390;391;392;393;394 347;348;349;350;351 351 5 362870 262440 AAPILRSFSWGR ______________________________ ______________________________ M A A G R W 2 2 0 0 0 0 0 1 0 1 1 0 0 1 1 2 0 1 0 0 0 0 12 1 1359.7412 Q9Y2Z4 Q9Y2Z4 2 13 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 3 0.03695 57.785 By MS/MS 8 0 1 1 0 0 0 168 2852 174 395 352 352 1 0 0 AAPLAGFGYGLPISR YMYSTAPRPSLEPTRAAPLAGFGYGLPISR AAPLAGFGYGLPISRLYARYFQGDLKLYSM R A A S R L 3 1 0 0 0 0 0 3 0 1 2 0 0 1 2 1 0 0 1 0 0 0 15 0 1488.8089 Q15120 Q15120 318 332 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 2 0.00053711 151.79 By MS/MS 6.5 0.5 1 1 2 1241800 1241800 0 169 1490 175 396;397 353;354 354 2 12626 0 AAPPEPGEPEERK ______________________________ ______________________________ M A A R K S 2 1 0 0 0 0 4 1 0 0 0 1 0 0 4 0 0 0 0 0 0 0 13 1 1405.6838 Q5RI15 Q5RI15 2 14 COX20 Cytochrome c oxidase protein 20 homolog yes yes 2 0.040236 79.201 By MS/MS 10 0 1 1 377610 377610 0 170 1616 176 398 355 355 1 20352 0 AAPPGEYFSVGSQVSCR ______________________________ PPGEYFSVGSQVSCRTCQEQRLQGEVVAFD M A A C R T 2 1 0 0 1 1 1 2 0 0 0 0 0 1 2 3 0 0 1 2 0 0 17 0 1810.8308 Q3MHD2 Q3MHD2 2 18 LSM12 Protein LSM12 homolog yes yes 2 0.00044166 147.39 By MS/MS 9 0 1 1 305230 305230 0 171 1577 177 399 356 356 1 6006.9 0 AAPVDLELKK ______________________________ ______________________________ M A A K K A 2 0 0 1 0 0 1 0 0 0 2 2 0 0 1 0 0 0 0 1 0 0 10 1 1082.6336 O60925 O60925 2 11 PFDN1 Prefoldin subunit 1 no no 1 NaN NaN NaN 0 0 0 172 286 0 0 0 AAQAPSSFQLLYDLK EGGKGALALAQAVQRAAQAPSSFQLLYDLK AAQAPSSFQLLYDLKLPVEDKIRIIAQKIY R A A L K L 3 0 0 1 0 2 0 0 0 0 3 1 0 1 1 2 0 0 1 0 0 0 15 0 1650.8617 P11586 P11586 805 819 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 5.6156E-07 206.46 By MS/MS 4.5 0.5 1 1 2 1102100 1102100 0 173 582 178 400;401 357;358 357 2 98291 0 AAQCVTK ______________________________ ______________________________ M A A T K V 2 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 7 0 776.38507 O75131 O75131 2 8 CPNE3 Copine-3 yes yes 1 0.031106 89.296 By MS/MS 6 0 1 1 3276300 3276300 0 174 294 179 402 359 359 0 22522 0 AAQDLCEEALR FMKSVKLEWVQDNIRAAQDLCEEALRHYED DNIRAAQDLCEEALRHYEDFPKLWMMKGQI R A A L R H 3 1 0 1 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1274.5925 O94906 O94906 693 703 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 3.1975E-09 212.28 By MS/MS 4.5 0.5 1 1 2 3986200 3986200 0 175 376 180 403;404 360 360 1 353650 0 AAQEEYVKR ASALKAWGGKKENLKAAQEEYVKRALANSL KKENLKAAQEEYVKRALANSLACQGKYTPS K A A K R A 2 1 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1092.5564 P04075 P04075 323 331 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.0019266 152.06 By MS/MS 7 0 1 1 4264500 4264500 0 176 467 181 405 361 361 1 66946 0 AAQEFFQR VQVNKEAADDKSVAKAAQEFFQRLELGDVQ DDKSVAKAAQEFFQRLELGDVQALSLWQKF K A A Q R L 2 1 0 0 0 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 8 0 995.48248 Q5T160 Q5T160 222 229 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.027723 91.069 By MS/MS 6 0 1 1 2303400 2303400 0 177 1627 182 406 362 362 1 15834 0 AAQEQVLNASR MKRYKELVEMVKAKKAAQEQVLNASRAKK_ KAKKAAQEQVLNASRAKK____________ K A A S R A 3 1 1 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1185.6102 Q99543 Q99543 608 618 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 2 0.00079269 125.72 By MS/MS 5 0 1 1 392500 392500 0 178 2249 183 407 363 363 1 3936.6 0 AAQGEPQVQFK ______________________________ ______________________________ M A A F K L 2 0 0 0 0 3 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 11 0 1201.6091 P62826 P62826 2 12 RAN GTP-binding nuclear protein Ran yes yes 2 0.00056425 131.52 By MS/MS 9 0.816 1 1 1 3 5593500 5593500 0 179 1172 184 408;409;410 364;365 364 2 91085 0 AAQGVGPGPGSAAPPGLEAAR ______________________________ PGPGSAAPPGLEAARQKLALRRKKVLSTEE M A A A R Q 6 1 0 0 0 1 1 5 0 0 1 0 0 0 4 1 0 0 0 1 0 0 21 0 1829.9384 Q6NZ67;Q6P582 Q6NZ67 2 22 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A no no 2;3 1.3604E-08 213.71 By MS/MS 9.33 0.471 2 1 3 5913800 5913800 0 180 1694;1711 185 411;412;413 366;367;368 366 3 134300 0 AAQIPIVATTSTPGIVR ______________________________ QIPIVATTSTPGIVRNSKKRPASPSHNGSS M A A V R N 3 1 0 0 0 1 0 1 0 3 0 0 0 0 2 1 3 0 0 2 0 0 17 0 1693.9727 Q6PI98 Q6PI98 2 18 INO80C INO80 complex subunit C yes yes 2 0.00064608 158.11 By MS/MS 9 0 1 1 184800 184800 0 181 1718 186 414 369 369 1 3636.8 0 AAQLAIR AHNVSSKNRKAIVERAAQLAIRVTNPNARL NRKAIVERAAQLAIRVTNPNARLRSEENE_ R A A I R V 3 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 741.44972 P62910 P62910 115 121 RPL32 60S ribosomal protein L32 yes yes 2 0.0083247 141.98 By MS/MS By matching 9.33 0.471 2 1 2 1 4266000 4159900 106130 182 1185 187 415;416;417 370 370 1 93436 242010 AAQLCGAGMAAVVDR DSIIVKEVCTVVARRAAQLCGAGMAAVVDR AAQLCGAGMAAVVDRIRENRGLDALKVTVG R A A D R I 5 1 0 1 1 1 0 2 0 0 1 0 1 0 0 0 0 0 0 2 0 0 15 0 1488.7177 P52789 P52789 830 844 HK2 Hexokinase-2 yes yes 2 0.0033512 106.79 By MS/MS 4 0 1 1 511810 511810 0 183 1023 188 418 371 371 0 48164 0 AAQNISK ALSKNPGYIKLRKIRAAQNISKTIATSQNR YIKLRKIRAAQNISKTIATSQNRIYLTADN R A A S K T 2 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 730.39735 Q99623 Q99623 256 262 PHB2 Prohibitin-2 yes yes 2 0.017129 116.88 By MS/MS By matching 7.33 0.471 2 1 2 1 7842700 7815600 27139 184 2254 189 419;420;421 372;373 373 2 112730 48876 AAQQQEEQEEKEEEDDEQTLHR PDQGIAKAAPEEFRKAAQQQEEQEEKEEED QEEKEEEDDEQTLHRAREWDDWKDTHPRGY K A A H R A 2 1 0 2 0 5 8 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 22 1 2698.159 P78318 P78318 296 317 IGBP1 Immunoglobulin-binding protein 1 yes yes 4 0.0129 62.468 By MS/MS 7 0 1 1 1290500 1290500 0 185 1218 190 422 374 374 1 20259 0 AAQSANISVR CSIEESFQRFDAILKAAQSANISVRGYVSC DAILKAAQSANISVRGYVSCALGCPYEGKI K A A V R G 3 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1015.5411 P35914 P35914 156 165 HMGCL Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 2 0.0012214 119.34 By MS/MS 8 0 1 1 765420 765420 0 186 830 191 423 375;376 375 2 9663.4 0 AAQSSLYNDDR ______________________________ ______________________________ M A A D R N 2 1 1 2 0 1 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 11 0 1238.5527 P51825 P51825 2 12 AFF1 AF4/FMR2 family member 1 yes yes 2 0.041217 64.42 By MS/MS 7 0 1 1 44978 0 44978 187 1009 192 424 377 377 1 0 81003 AAREPNIDR RAPPIDRSILPTAPRAAREPNIDRSRLPKS LPTAPRAAREPNIDRSRLPKSPPYTAFLGN R A A D R S 2 2 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 1 1040.5363 P23588 P23588 79 87 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 0.013365 113.26 By MS/MS By MS/MS 5 0 3 2 1 5761800 5417600 344260 188 708 193 425;426;427 378;379;380;381 381 4 54335 289110 AASAAAAELQASGGPR ______________________________ ASAAAAELQASGGPRHPVCLLVLGMAGSGK M A A P R H 7 1 0 0 0 1 1 2 0 0 1 0 0 0 1 2 0 0 0 0 0 0 16 0 1426.7165 Q9HCN4 Q9HCN4 2 17 GPN1 GPN-loop GTPase 1 yes yes 2 0.00048145 201.08 By MS/MS 7 0 1 1 1967200 1967200 0 189 2515 194 428 382 382 1 30881 0 AASAAAASAAAASAASGSPGPGEGSAGGEK ______________________________ SGSPGPGEGSAGGEKRSTAPSAAASASASA M A A E K R 13 0 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 0 30 0 2386.0997 Q13263 Q13263 2 31 TRIM28 Transcription intermediary factor 1-beta yes yes 3 5.4035E-13 166.65 By MS/MS By MS/MS 4 0 2 1 1 4271500 4271500 0 190 1367 195 429;430 383;384 384 2 401980 0 AASAAAASAAAASAASGSPGPGEGSAGGEKR ______________________________ GSPGPGEGSAGGEKRSTAPSAAASASASAA M A A K R S 13 1 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 0 31 1 2542.2008 Q13263 Q13263 2 32 TRIM28 Transcription intermediary factor 1-beta yes yes 3 1.2037E-27 249.54 By MS/MS By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 10 1 58237000 57971000 265740 191 1367 196 431;432;433;434;435;436;437;438;439;440;441 385;386;387;388;389;390;391;392;393;394;395;396 390 11 4302900 566200 AASAAFQENVGR LVIAAVFDRDINCRRAASAAFQENVGRQGT CRRAASAAFQENVGRQGTFPHGIDILTTAD R A A G R Q 4 1 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 12 0 1219.5945 Q9BTW9 Q9BTW9 509 520 TBCD Tubulin-specific chaperone D yes yes 2 8.641E-13 240.37 By MS/MS 4 0.816 1 1 1 3 2213700 2213700 0 192 2319 197 442;443;444 397;398 397 2 81753 0 AASAATAAPTATPAAQESGTIPK RPREALSTNECKARRAASAATAAPTATPAA PTATPAAQESGTIPKKRQEVMKWNGWGYND R A A P K K 9 0 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 23 0 2082.0593 O00116 O00116 63 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 3.8309E-07 128.44 By MS/MS 5 0 1 1 729870 729870 0 193 80 198 445 399 399 1 7320.2 0 AASAGQEPLHNEELAGAGR LLVGFILFLTRSRGRAASAGQEPLHNEELA GQEPLHNEELAGAGRVAQPGPLEPEEPRAG R A A G R V 5 1 1 0 0 1 3 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 19 0 1876.9028 Q96HY6 Q96HY6 28 46 DDRGK1 DDRGK domain-containing protein 1 yes yes 2;3 2.526E-07 204.23 By MS/MS By MS/MS 7 0 3 2 1 18712000 18631000 81130 194 2169 199 446;447;448 400;401;402 402 3 292470 146110 AASAPYFEVLEK TGDSQAQELCLYLTKAASAPYFEVLEKWIY LTKAASAPYFEVLEKWIYRGIIHDPYSEFM K A A E K W 3 0 0 0 0 0 2 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 12 0 1323.6711 Q9BSJ2 Q9BSJ2 382 393 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00026897 145.99 By MS/MS 5.5 1.12 1 1 1 1 4 5039200 5039200 0 195 2307 200 449;450;451;452 403;404 403 2 395200 0 AASAYAVGDVK GQYFGELALVTNKPRAASAYAVGDVKCLVM NKPRAASAYAVGDVKCLVMDVQAFERLLGP R A A V K C 4 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 2 0 0 11 0 1050.5346 P13861 P13861 348 358 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2 0.013251 89.171 By MS/MS 6 0 1 1 1586600 1586600 0 196 608 201 453 405 405 1 10907 0 AASDIAMTELPPTHPIR NDRKEAAENSLVAYKAASDIAMTELPPTHP SDIAMTELPPTHPIRLGLALNFSVFYYEIL K A A I R L 3 1 0 1 0 0 1 0 1 2 1 0 1 0 3 1 2 0 0 0 0 0 17 0 1818.9298 P62258 P62258 154 170 YWHAE 14-3-3 protein epsilon yes yes 3 0.0082238 91.845 By MS/MS 8 0 1 1 1096900 1096900 0 197 1146 202 454 406 406 649 0 13849 0 AASEWLLR NKVDYDRIRDVGPDRAASEWLLRCGAMVRY RDVGPDRAASEWLLRCGAMVRYHGQERWQK R A A L R C 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 8 0 944.50797 Q99766 Q99766 65 72 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.018237 101.6 By MS/MS 9 0 1 1 138360 138360 0 198 2266 203 455 407 407 1 2722.9 0 AASFLKDDGDPPLLYDE LEKMNEDHVQKNGRKAASFLKDDGDPPLLY SFLKDDGDPPLLYDE_______________ K A A D E - 2 0 0 4 0 0 1 1 0 0 3 1 0 1 2 1 0 0 1 0 0 0 17 1 1864.8731 O14730 O14730 503 519 RIOK3 Serine/threonine-protein kinase RIO3 yes yes 2 0.0052803 113.52 By MS/MS 5 0 1 1 353800 353800 0 199 134 204 456 408 408 1 3548.4 0 AASIFGGAKPVDTAAR PKEDDSSASTSQSTRAASIFGGAKPVDTAA ASIFGGAKPVDTAAREREVEERLQKEQEKL R A A A R E 5 1 0 1 0 0 0 2 0 1 0 1 0 1 1 1 1 0 0 1 0 0 16 1 1530.8154 P23588 P23588 357 372 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 0.0023583 128.57 By MS/MS By MS/MS 5.55 1.23 1 1 3 3 3 6 5 33164000 31012000 2151600 200 708 205 457;458;459;460;461;462;463;464;465;466;467 409;410;411;412;413;414 410 6 372790 1936800 AASIYSSWAEEQR VSQDLLDLMHTLHTRAASIYSSWAEEQRHL TRAASIYSSWAEEQRHLETGGQKIEADSRT R A A Q R H 3 1 0 0 0 1 2 0 0 1 0 0 0 0 0 3 0 1 1 0 0 0 13 0 1496.6896 Q92538 Q92538 1509 1521 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 5.0821E-12 244.01 By MS/MS 2 0 1 1 323980 323980 0 201 2050 206 468 415 415 1 109580 0 AASLEYDYETIR GGPTLQCPPPSSPEKAASLEYDYETIRNID PEKAASLEYDYETIRNIDCYSTDFCVRVRD K A A I R N 2 1 0 1 0 0 2 0 0 1 1 0 0 0 0 1 1 0 2 0 0 0 12 0 1429.6725 Q96N66 Q96N66 289 300 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 2 4.0879E-06 190.57 By MS/MS 1.5 0.5 1 1 2 448900 448900 0 202 2200 207 469;470 416 416 1 125000 0 AASLTEDRDR ERSRERPSQPEGLRKAASLTEDRDRGRDAV EGLRKAASLTEDRDRGRDAVKREAALPPVS K A A D R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1132.5473 Q04637 Q04637 1207 1216 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.003959 127.46 By MS/MS By matching 3.8 1.6 2 1 1 1 4 1 9233000 9204400 28613 203 1291 208 471;472;473;474;475 417;418;419 417 3 2443600 40465 AASLTEDRDRGR ERSRERPSQPEGLRKAASLTEDRDRGRDAV LRKAASLTEDRDRGRDAVKREAALPPVSPL K A A G R D 2 3 0 2 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 12 2 1345.6698 Q04637 Q04637 1207 1218 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.035204 73.951 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 4749200 4749200 0 204 1291 209 476;477;478;479;480;481 420 420 1 1047700 0 AASLVGKK ______________________________ ______________________________ M A A K K I 2 0 0 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 8 1 772.48069 Q9BY32 Q9BY32 2 9 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.0020534 147.69 By MS/MS 9.5 0.5 1 1 2 1363000 1363000 0 205 2363 210 482;483 421 421 1 33375 0 AASQGYTVAR GENETYPRALLHWNRAASQGYTVARIKLGD LHWNRAASQGYTVARIKLGDYHFYGFGTDV R A A A R I 3 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1022.5145 Q9UBV2 Q9UBV2 621 630 SEL1L Protein sel-1 homolog 1 yes yes 2 1.5887E-12 214.71 By MS/MS 4 0 1 1 0 0 0 206 2706 211 484 422 422 1 0 0 AASQPTSLAPEK GLGLALGGGSPSRRKAASQPTSLAPEKLRE RRKAASQPTSLAPEKLREE___________ K A A E K L 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1198.6194 Q96N66 Q96N66 457 468 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 2 0.0063056 99.752 By MS/MS 1.5 0.5 1 1 2 192090 192090 0 207 2200 212 485;486 423 423 1 53912 0 AASRLELNLVR ______________________________ ______________________________ M A A V R L 2 2 1 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 1 1240.7252 Q9NZ43 Q9NZ43 2 12 USE1 Vesicle transport protein USE1 yes yes 2 0.017113 86.882 By MS/MS 8 0 1 1 339310 339310 0 208 2644 213 487 424 424 1 4283.8 0 AASSAAQGAFQGN EEFSQGIFSSRTFHRAASSAAQGAFQGN__ HRAASSAAQGAFQGN_______________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 2.5436E-05 185.33 By MS/MS 7.5 0.5 1 1 2 1349400 1349400 0 209 162 214 488;489 425 425 1 20669 0 AASSQTPTMCTTTVTVK VILQVGVINEAQFSKAASSQTPTMCTTTVT SSQTPTMCTTTVTVKIIDSDEGPECHPPVK K A A V K I 2 0 0 0 1 1 0 0 0 0 0 1 1 0 1 2 6 0 0 2 0 0 17 0 1782.8492 Q08554 Q08554 445 461 DSC1 Desmocollin-1 yes yes 2 4.7286E-06 145.81 By MS/MS 4.6 2.58 1 1 1 1 1 5 318850 0 318850 210 1311 215 490;491;492;493;494 426;427;428 427 780 3 0 308990 AASSSSPGSPVASSPSR SELGACDFEKPESPRAASSSSPGSPVASSP SSSSPGSPVASSPSRLSPTPDGPPPLAQPP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 5.8235E-05 194.86 By MS/MS 2.5 0.5 1 1 2 1328700 1328700 0 211 2050 216 495;496 429 429 1 341250 0 AASVLNTVLR ______________________________ ______________________________ M A A L R R 2 1 1 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 10 0 1042.6135 Q9Y676 Q9Y676 2 11 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 0.042395 78.264 By MS/MS 8 0 1 1 46825 46825 0 212 2932 217 497 430 430 1 591.16 0 AATAAADFTAK KGAVWGATLNKDATKAATAAADFTAKVWDA DATKAATAAADFTAKVWDAVSGDELMTLAH K A A A K V 6 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 11 0 1036.5189 Q9Y3F4 Q9Y3F4 74 84 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.00024217 139.43 By MS/MS 7.5 0.5 1 1 2 6859300 6859300 0 213 2877 218 498;499 431 431 1 106170 0 AATALKDVVK PWCGHCQRLTPEWKKAATALKDVVKVGAVD PEWKKAATALKDVVKVGAVDADKHHSLGGQ K A A V K V 3 0 0 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 10 1 1014.6073 Q15084 Q15084 68 77 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.02563 105.17 By MS/MS 6 0 1 1 2603600 2603600 0 214 1488 219 500 432 432 1 17897 0 AATALLEAGLAR ______________________________ ______________________________ M A A A R V 5 1 0 0 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 12 0 1155.6612 Q8WUK0 Q8WUK0 2 13 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 1.4793E-08 210.08 By MS/MS 9 0 2 2 3609900 3609900 0 215 2016 220;221 501;502 433;434;435 433 3 71044 0 AATASAGAGGIDGK ______________________________ MAATASAGAGGIDGKPRTSPKSVKFLFGGL M A A G K P 5 0 0 1 0 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 14 0 1145.5677 Q02978 Q02978 2 15 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 2.6199E-05 196.16 By MS/MS 8 0 1 1 832330 832330 0 216 1284 222 503 436 436 1 10508 0 AATASAGAGGIDGKPR ______________________________ ATASAGAGGIDGKPRTSPKSVKFLFGGLAG M A A P R T 5 1 0 1 0 0 0 4 0 1 0 1 0 0 1 1 1 0 0 0 0 0 16 1 1398.7215 Q02978 Q02978 2 17 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 7.6193E-17 262.15 By MS/MS By MS/MS 5.79 3.12 3 3 2 1 1 1 3 5 2 3 18 6 223860000 222280000 1581000 217 1284 223 504;505;506;507;508;509;510;511;512;513;514;515;516;517;518;519;520;521;522;523;524;525;526;527 437;438;439;440;441;442;443;444;445;446;447;448;449;450;451;452;453;454;455;456;457;458;459;460;461;462 452 22 4126600 2138200 AATFFGEVVK ______________________________ ______________________________ M A A V K A 2 0 0 0 0 0 1 1 0 0 0 1 0 2 0 0 1 0 0 2 0 0 10 0 1067.5651 O95456 O95456 2 11 PSMG1 Proteasome assembly chaperone 1 yes yes 2 0.012773 91.265 By MS/MS 8 0 1 1 392350 392350 0 218 412 224 528 463 463 1 4953.3 0 AATFFGEVVKAPCR ______________________________ MAATFFGEVVKAPCRAGTEDEEEEEEGRRE M A A C R A 3 1 0 0 1 0 1 1 0 0 0 1 0 2 1 0 1 0 0 2 0 0 14 1 1551.7868 O95456 O95456 2 15 PSMG1 Proteasome assembly chaperone 1 yes yes 2 5.9972E-08 201.46 By MS/MS 8 0 1 1 639530 639530 0 219 412 225 529 464 464 1 8074 0 AATIHHR DVDSVSARQPLCQYRAATIHHRLASMYHSC RQPLCQYRAATIHHRLASMYHSCLRNQVGD R A A H R L 2 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 7 0 804.43547 Q3B7T1 Q3B7T1 1023 1029 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.03963 97.473 By MS/MS 3 0 1 1 38666 38666 0 220 1574 226 530 465 465 1 707.48 0 AATLAQELEK QVKKYHRLKEEASKRAATLAQELEKFNRDQ EASKRAATLAQELEKFNRDQKADQDRLDLE R A A E K F 3 0 0 0 0 1 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1072.5764 Q14683 Q14683 386 395 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 3.3113E-05 159.34 By MS/MS 3 0 1 1 1554800 1554800 0 221 1451 227 531 466 466 1 28449 0 AATPQVAAELEK LRTQWDLTNIQDAIRAATPQVAAELEKSLS AIRAATPQVAAELEKSLSPGLDTKQLPSPG R A A E K S 4 0 0 0 0 1 2 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1226.6507 O95900 O95900 285 296 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.0093325 90.913 By MS/MS 7 0 1 1 1685000 1685000 0 222 432 228 532 467 467 1 26451 0 AATSPALFNR VVFTMNPSSEGLKDRAATSPALFNRCVLNW GLKDRAATSPALFNRCVLNWFGDWSTEALY R A A N R C 3 1 1 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 10 0 1046.5509 Q14204 Q14204 3079 3088 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0011791 120.15 By MS/MS 2 0.816 1 1 1 3 6078900 6078900 0 223 1433 229 533;534;535 468;469;470 469 3 1526000 0 AATTGSGVKVPR ______________________________ ______________________________ M A A P R N 2 1 0 0 0 0 0 2 0 0 0 1 0 0 1 1 2 0 0 2 0 0 12 1 1142.6408 Q13404 Q13404 2 13 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 2 0.0015816 113.44 By MS/MS 10 0 1 1 1975300 1975300 0 224 1377 230 536 471;472 472 2 106460 0 AAVAATAAAK ______________________________ ______________________________ M A A A K G 7 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 10 0 843.48142 Q6Y1H2 Q6Y1H2 2 11 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 2 9.7233E-05 154.12 By MS/MS 2 0.816 1 1 1 3 443040 443040 0 225 1737 231 537;538;539 473 473 1 104330 0 AAVAGEDGR KGFAFVQYVNERNARAAVAGEDGRMIAGQV NERNARAAVAGEDGRMIAGQVLDINLAAEP R A A G R M 3 1 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 844.40389 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 65 73 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.0092734 101.72 By MS/MS 7.5 0.5 1 1 2 3355900 3355900 0 226 514 232 540;541 474 474 1 51909 0 AAVDAGFVPNDMQVGQTGK YDLADQLHAAVGASRAAVDAGFVPNDMQVG AGFVPNDMQVGQTGKIVAPELYIAVGISGA R A A G K I 3 0 1 2 0 2 0 3 0 0 0 1 1 1 1 0 1 0 0 3 0 0 19 0 1903.9098 P13804 P13804 250 268 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 6.1848E-05 178.22 By MS/MS 8 0 1 1 852720 852720 0 227 606 233 542 475 475 1 10765 0 AAVDGLSK ESRQDDILKRLYELKAAVDGLSKMIQTPDA KRLYELKAAVDGLSKMIQTPDADLDVTNII K A A S K M 2 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 759.41267 Q13155 Q13155 71 78 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.011562 109.01 By MS/MS 7 0 1 1 3748000 3748000 0 228 1360 234 543 476 476 1 58836 0 AAVEDPR LIDGREAVTFLRKIKAAVEDPRVLLLDL__ VTFLRKIKAAVEDPRVLLLDL_________ K A A P R V 2 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 7 0 756.37662 P36957 P36957 441 447 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.048248 90.986 By MS/MS By matching 6 0 2 1 1 1553500 1473700 79837 229 842 235 544;545 477 477 1 10130 81810 AAVEDPRVLLLDL LIDGREAVTFLRKIKAAVEDPRVLLLDL__ IKAAVEDPRVLLLDL_______________ K A A D L - 2 1 0 2 0 0 1 0 0 0 4 0 0 0 1 0 0 0 0 2 0 0 13 1 1422.8082 P36957 P36957 441 453 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.0056269 123.62 By MS/MS 6 0 1 1 1633800 1633800 0 230 842 236 546 478;479 479 2 11231 0 AAVEDSGTTVETIK RAAGEPGTSMPPEKKAAVEDSGTTVETIKL KAAVEDSGTTVETIKLGGVSSTEELDIRTL K A A I K L 2 0 0 1 0 0 2 1 0 1 0 1 0 0 0 1 3 0 0 2 0 0 14 0 1419.7093 Q5VTR2 Q5VTR2 23 36 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 2.5426E-24 288.11 By MS/MS 3 0 1 1 978630 978630 0 231 1648 237 547 480 480 1 17906 0 AAVEEGIVLGGGCALLR NEKKDRVTDALNATRAAVEEGIVLGGGCAL VEEGIVLGGGCALLRCIPALDSLTPANEDQ R A A L R C 3 1 0 0 1 0 2 4 0 1 3 0 0 0 0 0 0 0 0 2 0 0 17 0 1683.8978 P10809 P10809 430 446 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 4.2746E-11 237.76 By MS/MS By MS/MS 6.42 1.8 1 2 5 1 1 1 1 9 3 97282000 96888000 394370 232 569 238 548;549;550;551;552;553;554;555;556;557;558;559 481;482;483;484;485;486;487;488 484 8 677420 396440 AAVELEEPEDAR RKALEHVPNSVRLWKAAVELEEPEDARIML LWKAAVELEEPEDARIMLSRAVECCPTSVE K A A A R I 3 1 0 1 0 0 4 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 12 0 1327.6256 O94906 O94906 409 420 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.00024221 147.73 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 5444000 5405100 38829 233 376 239 560;561;562 489;490 490 2 460450 82731 AAVENLPTFLVELSR PDRLELEAAQKFLERAAVENLPTFLVELSR AAVENLPTFLVELSRVLANPGNSQVARVAA R A A S R V 2 1 1 0 0 0 2 0 0 0 3 0 0 1 1 1 1 0 0 2 0 0 15 0 1657.9039 Q14974 Q14974 28 42 KPNB1 Importin subunit beta-1 yes yes 2 4.8762E-05 193 By MS/MS 4 0 1 1 115870 115870 0 234 1462 240 563 491;492 491 2 10904 0 AAVESLGFILFR LLHVAVSDVNDDVRRAAVESLGFILFRTPE VRRAAVESLGFILFRTPEQCPSVVSLLSES R A A F R T 2 1 0 0 0 0 1 1 0 1 2 0 0 2 0 1 0 0 0 1 0 0 12 0 1321.7394 Q99460 Q99460 617 628 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0014104 117.53 By MS/MS 4 0 1 1 54343 54343 0 235 2246 241 564 493 493 1 5114.1 0 AAVETLGVPCFLGGMAR GSQALLTPTSADKLRAAVETLGVPCFLGGM VETLGVPCFLGGMARGLLGRNHPLHIRENR R A A A R G 3 1 0 0 1 0 1 3 0 0 2 0 1 1 1 0 1 0 0 2 0 0 17 0 1747.8749 A1L0T0 A1L0T0 306 322 ILVBL Acetolactate synthase-like protein yes yes 2 0.00058125 125.54 By MS/MS 5.5 0.5 1 1 2 1145700 1145700 0 236 9 242 565;566 494;495 494 3 2 9057 0 AAVGQESPGGLEAGNAK KNDDLNKPINKGRKRAAVGQESPGGLEAGN VGQESPGGLEAGNAKAPKLQDLAKKAAPAE R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.00054909 156.6 By MS/MS 3 0 1 1 251200 251200 0 237 1565 243 567 496 496 1 4596.2 0 AAVIIMAVEK HSLINLPANSTIKKKAAVIIMAVEKQTLMQ TIKKKAAVIIMAVEKQTLMQHILRCDYEAC K A A E K Q 3 0 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 0 2 0 0 10 0 1043.6049 O95071 O95071 864 873 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.022362 85.676 By MS/MS 2 0 1 1 139090 139090 0 238 384 244 568 497 497 1 47047 0 AAVLLEQER DHSLKEHELLEQQKRAAVLLEQERQQEIAK LEQQKRAAVLLEQERQQEIAKMGTPVPRPP R A A E R Q 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1027.5662 Q13435 Q13435 184 192 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0040624 110.87 By MS/MS 3 0 1 1 2579900 2579900 0 239 1384 245 569 498 498 1 47205 0 AAVLLEQERQQEIAK DHSLKEHELLEQQKRAAVLLEQERQQEIAK AAVLLEQERQQEIAKMGTPVPRPPQDMGQI R A A A K M 3 1 0 0 0 3 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 15 1 1724.9421 Q13435 Q13435 184 198 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.00030158 190.36 By MS/MS 3 0 1 1 807880 807880 0 240 1384 246 570 499 499 1 14782 0 AAVPELLQQQEEDRSK ______________________________ AVPELLQQQEEDRSKLRSVSVDLNVDPSLQ M A A S K L 2 1 0 1 0 3 3 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 16 1 1839.9327 Q9Y5X3 Q9Y5X3 2 17 SNX5 Sorting nexin-5 yes yes 2 0.00029445 150.14 By MS/MS 6.5 0.5 1 1 2 2422100 2422100 0 241 2927 247 571;572 500;501 500 2 22598 0 AAVPLGGFLCNVADK TESEPGQQPMELENKAAVPLGGFLCNVADK AAVPLGGFLCNVADKSGAMEMAGLCPAACM K A A D K S 3 0 1 1 1 0 0 2 0 0 2 1 0 1 1 0 0 0 0 2 0 0 15 0 1530.7864 Q7L8L6 Q7L8L6 661 675 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2;3 0.00035146 136.53 By MS/MS 5.75 0.829 2 1 1 4 4555800 4555800 0 242 1771 248 573;574;575;576 502;503 502 2 44874 0 AAVPSGASTGIYEALELR PTVEVDLFTSKGLFRAAVPSGASTGIYEAL PSGASTGIYEALELRDNDKTRYMGKGVSKA R A A L R D 4 1 0 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 1 1 0 0 18 0 1803.9367 P06733;P13929;P09104 P06733 33 50 ENO1;ENO3;ENO2 Alpha-enolase;Beta-enolase;Gamma-enolase yes no 2 0.00017402 145.43 By MS/MS 6 0 1 1 1970300 1970300 0 243 500 249 577 504 504 1 13544 0 AAVQAAEVK ______________________________ ______________________________ M A A V K V 4 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 9 0 885.49198 Q15046 Q15046 2 10 KARS Lysine--tRNA ligase yes yes 1;2 0.0027434 115.71 By MS/MS By MS/MS 5 0 3 2 1 3592800 3552400 40353 244 1481 250 578;579;580 505;506;507 506 2 35629 33888 AAVQAAEVKVDGSEPK ______________________________ AVQAAEVKVDGSEPKLSKNELKRRLKAEKK M A A P K L 4 0 0 1 0 1 2 1 0 0 0 2 0 0 1 1 0 0 0 3 0 0 16 1 1597.8312 Q15046 Q15046 2 17 KARS Lysine--tRNA ligase yes yes 2 0.00025874 190.34 By MS/MS 5 0 1 1 7202900 7202900 0 245 1481 251 581 508 508 1 72242 0 AAVQELSSSILAGEDPEER RDSHLGPHRSTPESRAAVQELSSSILAGED ELSSSILAGEDPEERGVKLGLGDFIFYSVL R A A E R G 3 1 0 1 0 1 4 1 0 1 2 0 0 0 1 3 0 0 0 1 0 0 19 0 1999.9698 P49768 P49768 359 377 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes yes 2 3.4527E-25 287.88 By MS/MS 9 0 1 1 836920 836920 0 246 962 252 582 509 509 1 16471 0 AAVQMDPELAKR ______________________________ ______________________________ M A A K R L 3 1 0 1 0 1 1 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 12 1 1327.6918 Q9Y312 Q9Y312 2 13 AAR2 Protein AAR2 homolog yes yes 2 0.0083007 93.561 By MS/MS 7 0 2 2 3559700 3559700 0 247 2853 253;254 583;584 510;511 511 1188 2 55880 0 AAVQVLDDIEK VGVSNVFGPGTRIPKAAVQVLDDIEKCLEK RIPKAAVQVLDDIEKCLEKKQQSV______ K A A E K C 2 0 0 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1199.6398 P22033 P22033 731 741 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.00011569 155.53 By MS/MS 5 0 1 1 1409600 1409600 0 248 685 255 585 512 512 1 14137 0 AAVSAFPTDSLER RRPQSRSQSFFAAARAAVSAFPTDSLERDL ARAAVSAFPTDSLERDLSPSSAPAVASAAE R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 0.014177 88.155 By MS/MS By matching 3.67 1.6 1 2 1 1 1 5 1 7122200 7023800 98356 249 129 256 586;587;588;589;590;591 513;514;515 514 1 293150 12519 AAVSQYEK LNPVQYNPYTEPLWKAAVSQYEKIIAPAEQ YTEPLWKAAVSQYEKIIAPAEQKIAGKLKN K A A E K I 2 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 8 0 894.4447 Q8NCM8 Q8NCM8 383 390 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.023448 95.815 By MS/MS 1 0 1 1 103610 103610 0 250 1952 257 592 516 516 1 24966 0 AAVTSLFAK LATTQTDTMLSAEEKAAVTSLFAKVKVDEV LSAEEKAAVTSLFAKVKVDEVGGEALGRLL K A A A K V 3 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 9 0 906.51747 CON__Q3SX09 CON__Q3SX09 64 72 yes yes 2 0.002079 127.46 By MS/MS By matching 10 0 2 1 1 465510 247080 218430 + 251 63 258 593;594 517 517 1 13317 279660 AAVVAKR ______________________________ ______________________________ M A A K R E 3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 7 1 713.45481 Q9BV81 Q9BV81 2 8 EMC6 ER membrane protein complex subunit 6 yes yes 2 0.038841 105.42 By MS/MS 10 0 1 1 5812800 5812800 0 252 2330 259 595 518 518 1 313290 0 AAVVEVEVGGGAAGER ______________________________ AVVEVEVGGGAAGERELDEVDMSDLSPEEQ M A A E R E 4 1 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 16 0 1469.7474 Q9H920 Q9H920 2 17 RNF121 RING finger protein 121 yes yes 2 0.00048599 166.48 By MS/MS 1 0 1 1 101980 101980 0 253 2479 260 596 519 519 1 24574 0 AAVVPLGTWR VTGVLVVTTWLLSGRAAVVPLGTWRRLSLC LLSGRAAVVPLGTWRRLSLCWFAVCGFIHL R A A W R R 2 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 1 0 2 0 0 10 0 1068.608 Q15125 Q15125 53 62 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 2 0.02456 84.615 By MS/MS 9 0 1 1 550820 550820 0 254 1491 261 597 520 520 1 10840 0 AAVWQQVLAVDAR ______________________________ ______________________________ M A A A R Y 4 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 3 0 0 13 0 1425.7728 Q9H1Z4 Q9H1Z4 2 14 WDR13 WD repeat-containing protein 13 yes yes 2 0.0082732 99.522 By MS/MS 6 0 1 1 45611 45611 0 255 2424 262 598 521 521 1 313.54 0 AAYADLLTPLISK KMLNIHVDKLLKPTKAAYADLLTPLISKLS TKAAYADLLTPLISKLSPYPSSPMRRPQSA K A A S K L 3 0 0 1 0 0 0 0 0 1 3 1 0 0 1 1 1 0 1 0 0 0 13 0 1374.7759 O94967 O94967 278 290 WDR47 WD repeat-containing protein 47 yes yes 2 3.9152E-05 180.07 By MS/MS 4 0 1 1 87973 87973 0 256 380 263 599 522 522 1 8278.8 0 AAYAGGLVLDPK EIDGDTNKYKKGRKKAAYAGGLVLDPKVGF RKKAAYAGGLVLDPKVGFYDKFILLLDFNS K A A P K V 3 0 0 1 0 0 0 2 0 0 2 1 0 0 1 0 0 0 1 1 0 0 12 0 1173.6394 P09884 P09884 837 848 POLA1 DNA polymerase alpha catalytic subunit yes yes 2 0.022606 83.862 By MS/MS 2 0 1 1 110430 110430 0 257 544 264 600 523 523 1 37353 0 AAYFGIYDTAK YQGFNVSVQGIIIYRAAYFGIYDTAKGMLP IIYRAAYFGIYDTAKGMLPDPKNTHIVISW R A A A K G 3 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 0 2 0 0 0 11 0 1218.5921 P05141 P05141 189 199 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.00018806 144.77 By MS/MS By MS/MS 6.65 2.61 1 1 1 1 1 1 1 6 3 1 16 1 472820000 471790000 1029900 258 487 265 601;602;603;604;605;606;607;608;609;610;611;612;613;614;615;616;617 524;525;526;527;528;529;530;531;532;533;534;535;536;537;538;539;540;541;542;543 533 19 13459000 1389800 AAYFGVYDTAK YQGFSVSVQGIIIYRAAYFGVYDTAKGMLP IIYRAAYFGVYDTAKGMLPDPKNTHIVVSW R A A A K G 3 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 11 0 1204.5764 P12235;P12236 P12236 189 199 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 2.2781E-05 161.27 By MS/MS By MS/MS 5.91 2.91 1 1 1 1 1 1 3 1 1 10 1 133310000 132830000 485160 259 589;588 266 618;619;620;621;622;623;624;625;626;627;628 544;545;546;547;548;549;550;551;552;553 551 10 5473700 654700 AAYNQVK IYTISQATAAGDVIKAAYNQVKTIAQGNLS TAAGDVIKAAYNQVKTIAQGNLSNTDVQAA K A A V K T 2 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 7 0 792.413 P22695 P22695 353 359 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.034507 101.33 By MS/MS 7 0 1 1 3415600 3415600 0 260 696 267 629 554 554 1 53619 0 AAYPDLENPPLLVTPSQQAK NIISRLQEVFGHAIKAAYPDLENPPLLVTP LENPPLLVTPSQQAKFGDYQCNSAMGISQM K A A A K F 3 0 1 1 0 2 1 0 0 0 3 1 0 0 4 1 1 0 1 1 0 0 20 0 2151.1212 P54136 P54136 90 109 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 1.0327E-05 186.42 By MS/MS 5.75 0.829 2 1 1 4 9991800 9991800 0 261 1043 268 630;631;632;633 555;556 556 2 102160 0 AAYVLFYQR DSSVSTASEDQIVSKAAYVLFYQRQDTFSG DQIVSKAAYVLFYQRQDTFSGTGFFPLDRE K A A Q R Q 2 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 2 1 0 0 9 0 1129.592 P51784;Q9Y4E8 Q9Y4E8 924 932 USP11;USP15 Ubiquitin carboxyl-terminal hydrolase 11;Ubiquitin carboxyl-terminal hydrolase 15 no no 2 0.021203 110.36 By MS/MS 4 0 1 1 290460 290460 0 262 1006;2893 269 634 557 557 0 27334 0 ACAELHQNVNVK FPDEFHLQTLNPFLRACAELHQNVNVKNII FLRACAELHQNVNVKNIIIALIDRLALFAH R A C V K N 2 0 2 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1381.6772 Q96QK1 Q96QK1 285 296 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00033082 141.95 By MS/MS 5 0 1 1 595550 595550 0 263 2217 270 635 558 558 1 5973.1 0 ACANPAAGSVILLENLR DVLFLKDCVGPEVEKACANPAAGSVILLEN ANPAAGSVILLENLRFHVEEEGKGKDASGN K A C L R F 4 1 2 0 1 0 1 1 0 1 3 0 0 0 1 1 0 0 0 1 0 0 17 0 1767.9302 P00558 P00558 107 123 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 4.3808E-06 220.99 By MS/MS 7.33 0.471 2 1 3 565210 565210 0 264 447 271 636;637;638 559;560;561 559 3 8731.1 0 ACARPLISVYSEK ______________________________ ______________________________ M A C E K G 2 1 0 0 1 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 0 0 13 1 1492.7708 P36578 P36578 2 14 RPL4 60S ribosomal protein L4 yes yes 2 0.00025194 156.51 By MS/MS By MS/MS 6.33 0.471 2 1 1 2 16821000 16581000 240290 265 838 272 639;640;641 562;563;564;565;566;567 567 6 113980 304290 ACEIRDQITSK EYQMELKYLKQYKEKACEIRDQITSKEAQL YKEKACEIRDQITSKEAQLTSSKEIVKSYE K A C S K E 1 1 0 1 1 1 1 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 11 1 1319.6503 Q92878 Q92878 220 230 RAD50 DNA repair protein RAD50 yes yes 2 0.018089 107.45 By MS/MS 3 0 1 1 220520 220520 0 266 2074 273 642 568 568 1 4034.8 0 ACELFLR RRAVSQLIRLGQCTKACELFLRNRAAAVHT IRLGQCTKACELFLRNRAAAVHTAIRQLRI K A C L R N 1 1 0 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 907.45857 Q8IYI6 Q8IYI6 427 433 EXOC8 Exocyst complex component 8 yes yes 2 0.014248 124.37 By MS/MS 5 0 1 1 1046900 1046900 0 267 1887 274 643 569 569 1 10500 0 ACFLGATVK LASQNFSYGVTEMYKACFLGATVKYLQKFI VTEMYKACFLGATVKYLQKFIPEITISDIL K A C V K Y 2 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 9 0 965.50044 Q9H9P8 Q9H9P8 375 383 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.012679 95.741 By MS/MS 7 0 1 1 1519100 1519100 0 268 2488 275 644 570 570 1 23846 0 ACGDSTLTQITAGLDPVGR QEAEQLRNQIRDARKACGDSTLTQITAGLD STLTQITAGLDPVGRIQMRTRRTLRGHLAK K A C G R I 2 1 0 2 1 1 0 3 0 1 2 0 0 0 1 1 3 0 0 1 0 0 19 0 1930.9418 P62879 P62879 24 42 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes yes 2 7.2741E-05 200 By MS/MS 8 0 1 1 289960 289960 0 269 1181 276 645 571 571 1 3660.8 0 ACGNFGIPCELR MGSTSDLGHCEKIKKACGNFGIPCELRVTS IKKACGNFGIPCELRVTSAHKGPDETLRIK K A C L R V 1 1 1 0 2 0 1 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 12 0 1392.6278 P22234 P22234 287 298 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.00049492 134.57 By MS/MS 7.5 0.5 1 1 2 11119000 11119000 0 270 689 277 646;647 572;573 572 2 171730 0 ACGVLETIR LPFHFDPKRAVQQLRACGVLETIRISAAGY AVQQLRACGVLETIRISAAGYPSRWAYHDF R A C I R I 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1017.5277 Q9ULV0;Q9NQX4;Q9Y4I1 Q9ULV0 680 688 MYO5B;MYO5C;MYO5A Unconventional myosin-Vb;Unconventional myosin-Vc;Unconventional myosin-Va no no 2 0.029567 100.02 By matching By MS/MS 2.5 0.5 1 1 1 1 296020 183190 112820 271 2775;2896 278 648;649 574 574 1 3351.9 159550 ACLDTAVENMPSLK EDPLLSGLLDSPALKACLDTAVENMPSLKM KACLDTAVENMPSLKMKVVEVLAGHGHLYS K A C L K M 2 0 1 1 1 0 1 0 0 0 2 1 1 0 1 1 1 0 0 1 0 0 14 0 1547.7324 P49327 P49327 1226 1239 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 8.5586E-33 299.42 By MS/MS 2 0.816 2 2 2 6 6670000 6670000 0 272 946 279;280 650;651;652;653;654;655 575;576;577;578;579 578 498 5 1864400 0 ACLLCSLVK ______________________________ DLRHLRACLLCSLVKTIDQFEYDGCDNCDA R A C V K T 1 0 0 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 9 0 1062.5566 P63272 P63272 15 23 SUPT4H1 Transcription elongation factor SPT4 yes yes 2 0.0080709 103.83 By MS/MS 10 0 1 1 171860 171860 0 273 1204 281 656 580 580 1 9262.4 0 ACLLETPIR ______________________________ ______________________________ M A C I R M 1 1 0 0 1 0 1 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 9 0 1071.5747 Q8IUR7 Q8IUR7 2 10 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.0011652 133.55 By MS/MS 6 1 1 1 2 1001600 1001600 0 274 1860 282 657;658 581;582 581 2 11922 0 ACLQPSQDPQMR PALGEALPHVVPTLRACLQPSQDPQMRLKL TLRACLQPSQDPQMRLKLFSILSTVLLRAT R A C M R L 1 1 0 1 1 3 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 0 12 0 1429.6442 Q86Y56 Q86Y56 611 622 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.047375 73.067 By MS/MS 4 0 1 1 216770 216770 0 275 1850 283 659 583 583 0 20399 0 ACLSALSEVK SAIIKPYPKGDERKKACLSALSEVKVQPGC DERKKACLSALSEVKVQPGCYLPSNPEAIV K A C V K V 2 0 0 0 1 0 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1076.5536 P42356 P42356 1760 1769 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0014511 114.89 By MS/MS 2.5 0.5 1 1 2 662670 662670 0 276 880 284 660;661 584 584 1 167140 0 ACLSGGTQR LYSTTLFLAREAFRRACLSGGTQRDWSQTL REAFRRACLSGGTQRDWSQTLNLLWLTVPL R A C Q R D 1 1 0 0 1 1 0 2 0 0 1 0 0 0 0 1 1 0 0 0 0 0 9 0 948.44471 Q96AA3 Q96AA3 69 77 RFT1 Protein RFT1 homolog yes yes 2 0.05048 75.738 By MS/MS 1.5 0.5 1 1 2 298300 298300 0 277 2106 285 662;663 585 585 1 85754 0 ACNQQLTAK RSDAERRQACDAILRACNQQLTAKLACPRH CDAILRACNQQLTAKLACPRHLGSLLELAE R A C A K L 2 0 1 0 1 2 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 1032.5022 Q14674 Q14674 56 64 ESPL1 Separin yes yes 2 0.01719 83.647 By MS/MS 2.5 0.5 1 1 2 282800 282800 0 278 1449 286 664;665 586 586 1 68071 0 ACPRPEGLNFQDLK NGLTVAQNQVLNLIKACPRPEGLNFQDLKN KACPRPEGLNFQDLKNQLKHMSVSSIKQAV K A C L K N 1 1 1 1 1 1 1 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 14 1 1643.809 P15927 P15927 218 231 RPA2 Replication protein A 32 kDa subunit yes yes 2 0.0023919 134.49 By MS/MS 8 0 1 1 1614900 1614900 0 279 629 287 666 587 587 1 20388 0 ACQIFVR SFGGAGGHAPGVARKACQIFVRNLPFDFTW HAPGVARKACQIFVRNLPFDFTWKMLKDKF K A C V R N 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 892.45891 P52272 P52272 652 658 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.021288 111.28 By MS/MS 5 0 1 1 2207000 2207000 0 280 1012 288 667 588 588 1 22136 0 ACQSIYPLHDVFVR VNKLIPDSIGKDIEKACQSIYPLHDVFVRK KACQSIYPLHDVFVRKVKMLKKPKFELGKL K A C V R K 1 1 0 1 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 2 0 0 14 0 1703.8454 P61247 P61247 200 213 RPS3A 40S ribosomal protein S3a yes yes 2;3 2.2405E-07 193.15 By MS/MS 7.75 0.433 1 3 4 13733000 13733000 0 281 1118 289 668;669;670;671 589;590;591;592;593 591 5 174650 0 ACSLLGK QEEDVVLLTAGEHNKACSLLGKLRLECADL LTAGEHNKACSLLGKLRLECADLLETRGVV K A C G K L 1 0 0 0 1 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 747.39491 Q6PI48 Q6PI48 448 454 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.010945 132.96 By MS/MS 5 0 1 1 824130 824130 0 282 1717 290 672 594 594 1 8265.6 0 ACTILLR GDEYFTFITDCKDPKACTILLRGASKEILS ITDCKDPKACTILLRGASKEILSEVERNLQ K A C L R G 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 7 0 845.47931 P49368 P49368 371 377 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0068004 148.21 By MS/MS 7 1.63 1 1 1 3 26234000 26234000 0 283 947 291 673;674;675 595;596;597 595 3 292790 0 ACVVHGSDLK RLNIPVSQVNPRDAKACVVHGSDLKDMTSE PRDAKACVVHGSDLKDMTSEQLDDILKYHT K A C L K D 1 0 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 2 0 0 10 0 1084.5335 P05023;P50993 P05023 662 671 ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2;3 0.00091224 138.06 By MS/MS 2.75 1.39 2 2 1 2 1 8 4928300 4928300 0 284 481 292 676;677;678;679;680;681;682;683 598;599;600;601;602 600 5 930680 0 ACYGVLR ESLRYKLLGGLAVRRACYGVLRFIMESGAK LGGLAVRRACYGVLRFIMESGAKGCEVVVS R A C L R F 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 837.41671 P23396 P23396 118 124 RPS3 40S ribosomal protein S3 yes yes 2 0.043355 94.669 By MS/MS 8.5 1.12 1 1 1 1 4 26266000 26266000 0 285 703 293 684;685;686;687 603 603 1 373510 0 ACYLSINPQKDETLETEK HSSSEFEIVKAIKERACYLSINPQKDETLE LSINPQKDETLETEKAQYYLPDGSTIEIGP R A C E K A 1 0 1 1 1 1 3 0 0 1 2 2 0 0 1 1 2 0 1 0 0 0 18 1 2138.0201 P61163 P61163 221 238 ACTR1A Alpha-centractin yes yes 3 0.00032149 120.59 By MS/MS 7 0 1 1 4904400 4904400 0 286 1113 294 688 604 604 1 76991 0 ADAEGESDLENSR RILAQATSDLVNAIKADAEGESDLENSRKL IKADAEGESDLENSRKLLSAAKILADATAK K A D S R K 2 1 1 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 13 0 1391.5801 Q9Y490 Q9Y490 842 854 TLN1 Talin-1 yes yes 2 1.6814E-17 266.26 By MS/MS 2 0 1 1 580340 580340 0 287 2888 295 689 605 605 1 196300 0 ADAHLGSSSVALPK LDPDPSHSPSDKVGRADAHLGSSSVALPKE RADAHLGSSSVALPKEASDGTGASQEPPTT R A D P K E 3 0 0 1 0 0 0 1 1 0 2 1 0 0 1 3 0 0 0 1 0 0 14 0 1351.7096 Q8NFQ8 Q8NFQ8 128 141 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 3 0.00091397 123.95 By MS/MS 5 0 1 1 2353500 2353500 0 288 1965 296 690 606 606 1 23605 0 ADALQAGASQFETSAAK KVLERDQKLSELDDRADALQAGASQFETSA ALQAGASQFETSAAKLKRKYWWKNCKMWAI R A D A K L 6 0 0 1 0 2 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 17 0 1664.8006 Q15836;P63027 Q15836 50 66 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 yes no 2 3.3759E-33 318.07 By MS/MS 9.5 0.5 1 1 2 1910900 1910900 0 289 1537 297 691;692 607;608 608 2 79296 0 ADAQANMNEK A D E K 3 0 2 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 10 0 1090.4713 REV__Q86VY4 yes yes 2 0.017648 99.013 By matching By MS/MS 3.33 0.471 4 2 2 4 2937700 531180 2406500 + 290 2973 298;299 693;694;695;696;697;698 609;610 610 1226 2 49988 306310 ADAVWNK YNLLKLYKINGDWQRADAVWNKIQEENVIP KINGDWQRADAVWNKIQEENVIPREKTLRL R A D N K I 2 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 7 0 802.39735 P42704 P42704 974 980 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.030363 104.45 By MS/MS 3.5 0.5 1 1 2 2483400 2483400 0 291 886 300 699;700 611 611 1 74661 0 ADAWEEIRR ______________________________ ______________________________ M A D R R L 2 2 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 9 1 1144.5625 O94874 O94874 2 10 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.019897 91.853 By MS/MS 4.5 0.5 1 1 2 15766000 15766000 0 292 372 301 701;702 612 612 1 1379000 0 ADCASGIFLAAEK KELLYFLDSCEPEFKADCASGIFLAAEKYA FKADCASGIFLAAEKYAPSKRWHIDTIMRV K A D E K Y 4 0 0 1 1 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 13 0 1351.6442 O43747 O43747 398 410 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.0013931 119.03 By MS/MS 4 0 1 1 1666500 1666500 0 293 231 302 703 613 613 1 156830 0 ADCSNIDK DSTLAVQQYIQQNIRADCSNIDKILEPPEG YIQQNIRADCSNIDKILEPPEGQDEGVWKY R A D D K I 1 0 1 2 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 8 0 921.3862 Q9Y3A3 Q9Y3A3 49 56 MOB4 MOB-like protein phocein yes yes 2 0.00027785 166.52 By MS/MS 9 0 1 1 1142200 1142200 0 294 2861 303 704 614 614 1 22479 0 ADDGRPFPQVIK CIGGVILFHETLYQKADDGRPFPQVIKSKG YQKADDGRPFPQVIKSKGGVVGIKVDKGVV K A D I K S 1 1 0 2 0 1 0 1 0 1 0 1 0 1 2 0 0 0 0 1 0 0 12 1 1341.7041 P04075 P04075 88 99 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.03024 70.488 By MS/MS 7 0 1 1 6292700 6292700 0 295 467 304 705 615 615 1 98785 0 ADDILDLK QLDLAKNRLYQAIQRADDILDLKFCMDGVQ LYQAIQRADDILDLKFCMDGVQTALRSEDY R A D L K F 1 0 0 3 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 901.47566 Q9H9E3 Q9H9E3 129 136 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.025855 93.143 By MS/MS 4 0 1 1 493810 493810 0 296 2486 305 706 616 616 1 46471 0 ADDKLIAEEGVDSLNVK NFLRFQLTMRLRSIKADDKLIAEEGVDSLN DKLIAEEGVDSLNVKELQAACRARGMRALG K A D V K E 2 0 1 3 0 0 2 1 0 1 2 2 0 0 0 1 0 0 0 2 0 0 17 1 1814.9262 O95202 O95202 357 373 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 3 0.018534 74.726 By MS/MS 5 0 1 1 836080 836080 0 297 394 306 707 617 617 1 8385.5 0 ADDLDFETGDAGASATFPMQCSALR ______________________________ AGASATFPMQCSALRKNGFVVLKGRPCKIV M A D L R K 5 1 0 4 1 1 1 2 0 0 2 0 1 2 1 2 2 0 0 0 0 0 25 0 2645.1374 P63241;Q6IS14 P63241 2 26 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 1.0626E-08 160.77 By MS/MS 10 0 1 1 98687 98687 0 298 1201 307 708 618;619 619 698 2 5318.9 0 ADDLDFETGDAGASATFPMQCSALRK ______________________________ GASATFPMQCSALRKNGFVVLKGRPCKIVE M A D R K N 5 1 0 4 1 1 1 2 0 0 2 1 1 2 1 2 2 0 0 0 0 0 26 1 2773.2323 P63241;Q6IS14 P63241 2 27 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 1.8515E-06 109.83 By MS/MS 10 0 1 1 483010 483010 0 299 1201 308 709 620;621 620 698 2 26032 0 ADDLLPLGDQTQDGDFGSR RVKKIRKKEKEVVVRADDLLPLGDQTQDGD LPLGDQTQDGDFGSRLRGRGRRRVSEVEEE R A D S R L 1 1 0 5 0 2 0 3 0 0 3 0 0 1 1 1 1 0 0 0 0 0 19 0 2018.9181 O43290 O43290 420 438 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 2 4.2332E-05 182.7 By MS/MS 4.5 0.5 1 1 2 1457300 1457300 0 300 201 309 710;711 622 622 1 119490 0 ADDNATIR DGASRRGESMQPNRRADDNATIRVTNLSED SMQPNRRADDNATIRVTNLSEDTRETDLQE R A D I R V 2 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 8 0 874.41446 O75821 O75821 235 242 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 8.5723E-05 176.6 By MS/MS 8.25 1.3 2 1 1 4 37147000 37147000 0 301 348 310 712;713;714;715 623;624;625;626 625 4 607950 0 ADDPSAADRNVEIWK ______________________________ ADDPSAADRNVEIWKIKKLIKSLEAARGNG M A D W K I 3 1 1 3 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 1 0 0 15 1 1685.8009 P62495 P62495 2 16 ETF1 Eukaryotic peptide chain release factor subunit 1 no no 1 NaN NaN NaN 0 0 0 302 1162 0 0 0 ADDYEQVK HCGRLYPEGLAQLARADDYEQVKNVADYYP GLAQLARADDYEQVKNVADYYPEYKLLFEG R A D V K N 1 0 0 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 8 0 966.42944 P61421 P61421 258 265 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 2 0.0014033 148.99 By MS/MS 7 0 1 1 724260 724260 0 303 1123 311 716 627 627 1 11370 0 ADEALAGLDEGALR ______________________________ MADEALAGLDEGALRKLLEVTADLAERRRI M A D L R K 4 1 0 2 0 0 2 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 14 0 1399.6943 P53814 P53814 2 15 SMTN Smoothelin yes yes 2 0.0071951 100.04 By MS/MS 4 0 1 1 145600 145600 0 304 1037 312 717 628 628 1 13702 0 ADEASELACPTPK VRQLTLRKLQELSSKADEASELACPTPKED SKADEASELACPTPKEDGLAQQQTQLNLRS K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 P49327 P49327 2194 2206 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.8927E-17 252.14 By MS/MS 3 1.41 1 1 1 1 1 5 9097500 9097500 0 305 946 313 718;719;720;721;722 629;630;631;632;633;634 631 5 1875000 0 ADEAYLIGR AIYSEQDTGQMHRQKADEAYLIGRGLAPVQ QMHRQKADEAYLIGRGLAPVQAYLHIPDII K A D G R G 2 1 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1006.5084 P11498 P11498 80 88 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0019309 122.19 By MS/MS By matching 3 0 2 1 1 562970 412600 150370 306 580 314 723;724 635 635 1 7549.5 19139 ADEEKLPPGWEK ______________________________ ______________________________ M A D E K R 1 0 0 1 0 0 3 1 0 0 1 2 0 0 2 0 0 1 0 0 0 0 12 1 1397.6827 Q13526;O15428 Q13526 2 13 PIN1;PIN1P1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1;Putative PIN1-like protein yes no 2 0.0003605 139.31 By MS/MS 10 0 1 1 428110 428110 0 307 1394 315 725 636 636 1 23074 0 ADEEKLPPGWEKR ______________________________ ______________________________ M A D K R M 1 1 0 1 0 0 3 1 0 0 1 2 0 0 2 0 0 1 0 0 0 0 13 2 1553.7838 Q13526;O15428 Q13526 2 14 PIN1;PIN1P1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1;Putative PIN1-like protein yes no 3 0.00050773 113.76 By MS/MS 10 0 1 1 756410 756410 0 308 1394 316 726 637 637 1 40768 0 ADEGISFR SDPKRTIAQDYGVLKADEGISFRGLFIIDD QDYGVLKADEGISFRGLFIIDDKGILRQIT K A D F R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 8 0 893.4243 Q06830 Q06830 121 128 PRDX1 Peroxiredoxin-1 yes yes 2 0.0064572 118.74 By MS/MS 8.5 0.5 1 1 2 3783800 3783800 0 309 1297 317 727;728 638 638 1 69830 0 ADEGLASLSEDGR LQEVFRFAYYKLLKKADEGLASLSEDGRSP KKADEGLASLSEDGRSPISIRQMAYVSGLS K A D G R S 2 1 0 2 0 0 2 2 0 0 2 0 0 0 0 2 0 0 0 0 0 0 13 0 1318.6001 Q96BI3 Q96BI3 97 109 APH1A Gamma-secretase subunit APH-1A yes yes 2 0.0007233 131.12 By MS/MS 1.5 0.5 1 1 2 256540 256540 0 310 2112 318 729;730 639 639 1 70407 0 ADEVAPAKK STPAPSRTASFSESRADEVAPAKKAKPAMP SFSESRADEVAPAKKAKPAMPQDSVPSPRS R A D K K A 3 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 9 1 927.50255 P53396 P53396 461 469 ACLY ATP-citrate synthase yes yes 2 0.043378 95.741 By MS/MS 4 0 1 1 486170 486170 0 311 1030 319 731 640 640 1 45752 0 ADEVLEILK QLSRFYDDAIVSQKKADEVLEILKTASDDR IVSQKKADEVLEILKTASDDRECENQLVLL K A D L K T 1 0 0 1 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 9 0 1028.5754 O75643 O75643 286 294 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.012513 96.034 By MS/MS 1.5 0.5 1 1 2 268050 268050 0 312 340 320 732;733 641 641 1 79122 0 ADFAGPSSAGRK ______________________________ ______________________________ M A D R K A 3 1 0 1 0 0 0 2 0 0 0 1 0 1 1 2 0 0 0 0 0 0 12 1 1162.5731 Q8IXW5 Q8IXW5 2 13 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 0.053422 42.336 By MS/MS 5 0 1 1 374350 374350 0 313 1879 321 734 642 642 0 3754.6 0 ADFAQACQDAGVR NVDAVHPGYGFLSERADFAQACQDAGVRFI ERADFAQACQDAGVRFIGPSPEVVRKMGDK R A D V R F 4 1 0 2 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1407.6201 P11498 P11498 125 137 PC Pyruvate carboxylase, mitochondrial yes yes 2 6.7391E-05 177.04 By MS/MS 3 0 1 1 2335000 2335000 0 314 580 322 735 643 643 1 42724 0 ADFCIIHYAGK GTHPKFQKPKQLKDKADFCIIHYAGKVDYK LKDKADFCIIHYAGKVDYKADEWLMKNMDP K A D G K V 2 0 0 1 1 0 0 1 1 2 0 1 0 1 0 0 0 0 1 0 0 0 11 0 1293.6176 P35580;P35579 P35579 566 576 MYH10;MYH9 Myosin-10;Myosin-9 no no 2;3 0.00058358 118.18 By MS/MS 2 0 2 2 916390 916390 0 315 824;825 323 736;737 644;645 644 2 309960 0 ADFDDRVSDEEKVR ______________________________ MADFDDRVSDEEKVRIAAKFITHAPPGEFN M A D V R I 1 2 0 4 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 14 2 1679.7751 P52907 P52907 2 15 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 2;3 7.1799E-05 171.99 By MS/MS 7 0 2 2 8353700 8353700 0 316 1025 324 738;739 646;647 646 2 131140 0 ADFDTYDDRAYSSFGGGR ______________________________ DTYDDRAYSSFGGGRGSRGSAGGHGSRSQK M A D G R G 2 2 0 4 0 0 0 3 0 0 0 0 0 2 0 2 1 0 2 0 0 0 18 1 1998.8344 Q15056 Q15056 2 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 7.4694E-05 148.85 By MS/MS 8.5 0.5 1 1 2 6343200 6343200 0 317 1485 325 740;741 648 648 1 80727 0 ADFFEDENGQR QSVTMGYYKNEAKTKADFFEDENGQRWLCT AKTKADFFEDENGQRWLCTGDIGEFEPDGC K A D Q R W 1 1 1 2 0 1 2 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1326.5477 O95573 O95573 548 558 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 1.2003E-05 171.33 By MS/MS By matching 3.25 1.79 1 1 2 3 1 4490000 4446200 43821 318 417 326 742;743;744;745 649;650 650 2 147400 36800 ADFIRESSEAQVQK AAYSVEHNQLEAHPKADFIRESSEAQVQKF KADFIRESSEAQVQKFLSRSVEDVRPHHTD K A D Q K F 2 1 0 1 0 2 2 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 14 1 1606.7951 Q9Y520 Q9Y520 860 873 PRRC2C Protein PRRC2C yes yes 2;3 0.0017109 166.24 By MS/MS 1.8 0.748 2 2 1 5 1968300 1968300 0 319 2905 327 746;747;748;749;750 651;652 652 2 521300 0 ADFKTQK VNHGLVPFLVSVLSKADFKTQKEAVWAVTN FLVSVLSKADFKTQKEAVWAVTNYTSGGTV K A D Q K E 1 0 0 1 0 1 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 7 1 836.43922 P52292 P52292 389 395 KPNA2 Importin subunit alpha-1 yes yes 2 0.044959 138.83 By MS/MS 6 0 1 1 944690 944690 0 320 1013 328 751 653 653 1 6494 0 ADFQGISPER ILAVCLRIQINPQNKADFQGISPERAFADF NPQNKADFQGISPERAFADFLFASTILHLV K A D E R A 1 1 0 1 0 1 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 10 0 1118.5356 P61803 P61803 83 92 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 0.00041942 134.84 By MS/MS 10 0 1 1 2458100 2458100 0 321 1130 329 752 654 654 1 132480 0 ADFSPFGNSQGPSR WIQTVEDLHERVPEKADFSPFGNSQGPSRV KADFSPFGNSQGPSRVAQFLVIYAPRRGIL K A D S R V 1 1 1 1 0 1 0 2 0 0 0 0 0 2 2 3 0 0 0 0 0 0 14 0 1465.6586 Q9H2M9 Q9H2M9 447 460 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.00029765 168.83 By MS/MS 3 0 1 1 1105200 1105200 0 322 2431 330 753 655 655 1 20222 0 ADFVLAANSYDLAIK LANRKRECGNAHYQRADFVLAANSYDLAIK ADFVLAANSYDLAIKAITSSAKVDMTFEEE R A D I K A 4 0 1 2 0 0 0 0 0 1 2 1 0 1 0 1 0 0 1 1 0 0 15 0 1609.8352 Q14318 Q14318 235 249 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 1.7363E-24 290.18 By MS/MS 6 0 1 1 3779400 3779400 0 323 1438 331 754 656 656 1 25980 0 ADFYVLEK VYLEEISSIISKMPKADFYVLEKTGLSIQN IISKMPKADFYVLEKTGLSIQNSSLFPILL K A D E K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 8 0 983.4964 Q96QE5 Q96QE5 226 233 TEFM Transcription elongation factor, mitochondrial yes yes 2 0.015054 105.14 By MS/MS 7 0 1 1 601880 601880 0 324 2216 332 755 657 657 1 9448.4 0 ADGELNVDSLITR ______________________________ ______________________________ M A D T R L 1 1 1 2 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1401.71 P62140 P62140 2 14 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 2 2.2955E-05 188.91 By MS/MS 7.5 0.5 1 1 2 506630 506630 0 325 1140 333 756;757 658;659 658 2 6872.7 0 ADGGTQVIDTK GYGKITGKNQVTATKADGGTQVIDTKNILI TATKADGGTQVIDTKNILIATGSEVTPFPG K A D T K N 1 0 0 2 0 1 0 2 0 1 0 1 0 0 0 0 2 0 0 1 0 0 11 0 1103.5459 P09622 P09622 167 177 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 8.5885E-09 199.33 By matching By MS/MS 6.33 0.471 2 1 2 1 2952400 2850700 101700 326 539 334 758;759;760 660 660 1 21446 104220 ADGIVSK RRMGESDDSILRLAKADGIVSKNF______ DSILRLAKADGIVSKNF_____________ K A D S K N 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 688.37555 P63220 P63220 75 81 RPS21 40S ribosomal protein S21 yes yes 2 0.012205 129.68 By MS/MS 9.5 0.5 1 1 2 5707600 5707600 0 327 1200 335 761;762 661 661 1 298560 0 ADGIVSKNF RRMGESDDSILRLAKADGIVSKNF______ ILRLAKADGIVSKNF_______________ K A D N F - 1 0 1 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 9 1 949.4869 P63220 P63220 75 83 RPS21 40S ribosomal protein S21 yes yes 2 0.012859 113.66 By MS/MS 10 0 1 1 1573200 1573200 0 328 1200 336 763 662 662 1 84792 0 ADGKISEQSDAK SHVVSQHQALLGTIRADGKISEQSDAKLKE TIRADGKISEQSDAKLKEIVTNFLAGFEA_ R A D A K L 2 0 0 2 0 1 1 1 0 1 0 2 0 0 0 2 0 0 0 0 0 0 12 1 1247.5994 P25705 P25705 528 539 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0015634 142.89 By MS/MS 6 0 1 1 422020 422020 0 329 723 337 764 663 663 1 2901 0 ADGQVAELLLR ______________________________ ______________________________ M A D L R R 2 1 0 1 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1183.6561 Q9Y285 Q9Y285 2 12 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 2.0783E-13 241.4 By MS/MS 6.4 1.02 1 2 1 1 5 4433800 4433800 0 330 2819 338 765;766;767;768;769 664;665;666;667 665 4 31564 0 ADGQVAELLLRR ______________________________ ______________________________ M A D R R L 2 2 0 1 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 12 1 1339.7572 Q9Y285 Q9Y285 2 13 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 0.027798 84.817 By MS/MS 6 0 1 1 985880 985880 0 331 2819 339 770 668 668 1 6777.1 0 ADGTATAPPPR GRDPKYICQKPSIQKADGTATAPPPRSNHA SIQKADGTATAPPPRSNHAAEEASSEDEEE K A D P R S 3 1 0 1 0 0 0 1 0 0 0 0 0 0 3 0 2 0 0 0 0 0 11 0 1052.5251 Q7Z6Z7 Q7Z6Z7 707 717 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0035347 107.79 By MS/MS 1.5 0.5 1 1 2 171790 171790 0 332 1802 340 771;772 669;670 669 2 50207 0 ADGYEPPVQESV SGKATGDETGAKVERADGYEPPVQESV___ VERADGYEPPVQESV_______________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 P61247 P61247 253 264 RPS3A 40S ribosomal protein S3a yes yes 2 6.9637E-06 181.53 By MS/MS 8.5 1.12 1 1 1 1 4 32666000 32666000 0 333 1118 341 773;774;775;776 671;672 671 2 429980 0 ADGYVLEGK KLLACIASRPGQCGRADGYVLEGKELEFYL PGQCGRADGYVLEGKELEFYLRKIKARKGK R A D G K E 1 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 1 0 0 9 0 950.47091 P62241 P62241 185 193 RPS8 40S ribosomal protein S8 yes yes 2 0.00026348 172.94 By MS/MS By matching 8.75 0.829 2 1 1 3 1 21839000 21687000 152740 334 1143 342 777;778;779;780 673;674 673 2 297750 206120 ADGYVLEGKELEFYLR KLLACIASRPGQCGRADGYVLEGKELEFYL DGYVLEGKELEFYLRKIKARKGK_______ R A D L R K 1 1 0 1 0 0 3 2 0 0 3 1 0 1 0 0 0 0 2 1 0 0 16 1 1900.9571 P62241 P62241 185 200 RPS8 40S ribosomal protein S8 yes yes 2;3 0.00013726 202.25 By MS/MS 8 0 2 2 1003000 1003000 0 335 1143 343 781;782 675;676 675 2 12663 0 ADHGEPIGRGTK QYAWESSAGGSFTVRADHGEPIGRGTKVIL TVRADHGEPIGRGTKVILHLKEDQTEYLEE R A D T K V 1 1 0 1 0 0 1 3 1 1 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1236.6211 P08238 P08238 169 180 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.0079245 113.93 By MS/MS 4 0 1 1 191170 191170 0 336 521 344 783 677 677 1 17990 0 ADHQPLTEASYVNLPTIALCNTDSPLR AAFREPRLLVVTDPRADHQPLTEASYVNLP NLPTIALCNTDSPLRYVDIAIPCNNKGAHS R A D L R Y 3 1 2 2 1 1 1 0 1 1 4 0 0 0 3 2 3 0 1 1 0 0 27 0 2995.4709 P08865 P08865 129 155 RPSA 40S ribosomal protein SA yes yes 3 9.8599E-13 147.28 By MS/MS 7 0 1 1 723090 723090 0 337 529 345 784 678 678 1 11351 0 ADHVQSLAQLENLCK ______________________________ ADHVQSLAQLENLCKQLYETTDTTTRLQAE M A D C K Q 2 0 1 1 1 2 1 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1724.8516 Q9UIA9 Q9UIA9 2 16 XPO7 Exportin-7 yes yes 2 8.2271E-05 187.74 By MS/MS 4 0 1 1 1216300 1216300 0 338 2740 346 785 679 679 1 114460 0 ADIDLTK IKGVGRRYAHVVLRKADIDLTKRAGELTED YAHVVLRKADIDLTKRAGELTEDEVERVIT K A D T K R 1 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 7 0 774.41233 P62269 P62269 48 54 RPS18 40S ribosomal protein S18 yes yes 2 0.014511 123.69 By MS/MS By matching 9.33 0.471 2 1 2 1 9685800 9602500 83351 339 1149 347 786;787;788 680 680 1 263020 190070 ADIDLTKR IKGVGRRYAHVVLRKADIDLTKRAGELTED AHVVLRKADIDLTKRAGELTEDEVERVITI K A D K R A 1 1 0 2 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 1 930.51345 P62269 P62269 48 55 RPS18 40S ribosomal protein S18 yes yes 2 0.019549 122.19 By MS/MS 9.5 0.5 1 1 2 12167000 12167000 0 340 1149 348 789;790 681;682 681 2 290820 0 ADIFMFDEPSSYLDVK GELQRFACAVVCIQKADIFMFDEPSSYLDV DIFMFDEPSSYLDVKQRLKAAITIRSLINP K A D V K Q 1 0 0 3 0 0 1 0 0 1 1 1 1 2 1 2 0 0 1 1 0 0 16 0 1875.8601 P61221 P61221 235 250 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 2 0.0083209 98 By MS/MS 6 0 1 1 120790 120790 0 341 1117 349 791 683 683 1 830.37 0 ADIGVAMGIAGSDVSK AVTGDGVNDSPALKKADIGVAMGIAGSDVS DIGVAMGIAGSDVSKQAADMILLDDNFASI K A D S K Q 3 0 0 2 0 0 0 3 0 2 0 1 1 0 0 2 0 0 0 2 0 0 16 0 1489.7446 P05023;P13637 P05023 728 743 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 yes no 2 0.00028984 173.06 By MS/MS 2.5 1.12 2 2 2 2 8 5869700 5869700 0 342 481 350;351 792;793;794;795;796;797;798;799 684;685;686;687;688;689;690;691 691 183 8 1065500 0 ADIQTER ______________________________ ______________________________ M A D E R A 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 7 0 831.40865 P62280 P62280 2 8 RPS11 40S ribosomal protein S11 yes yes 2 0.014637 127.56 By MS/MS By matching 9.33 0.471 2 1 2 1 5784600 5715500 69063 343 1152 352 800;801;802 692 692 1 116430 157490 ADISLDELIR ______________________________ ______________________________ M A D I R K 1 1 0 2 0 0 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1143.6136 Q9BY77 Q9BY77 2 11 POLDIP3 Polymerase delta-interacting protein 3 yes yes 2 0.0082879 100.25 By MS/MS 6 0 1 1 72475 72475 0 344 2365 353 803 693 693 1 498.21 0 ADKDYHFK SPLRPQNYLFGCELKADKDYHFKVDNDENE LFGCELKADKDYHFKVDNDENEHQLSLRTV K A D F K V 1 0 0 2 0 0 0 0 1 0 0 2 0 1 0 0 0 0 1 0 0 0 8 1 1022.4821 P06748 P06748 25 32 NPM1 Nucleophosmin yes yes 3 0.013332 112.41 By MS/MS 7 0 1 1 1967800 1967800 0 345 503 354 804 694 694 1 30891 0 ADKDYHFKVDNDENEHQLSLR SPLRPQNYLFGCELKADKDYHFKVDNDENE FKVDNDENEHQLSLRTVSLGAGAKDELHIV K A D L R T 1 1 2 4 0 1 2 0 2 0 2 2 0 1 0 1 0 0 1 1 0 0 21 2 2572.1942 P06748 P06748 25 45 NPM1 Nucleophosmin yes yes 4 0.0085616 67.168 By MS/MS 7 0 1 1 2536800 2536800 0 346 503 355 805 695 695 1 39823 0 ADKEAAFDDAVEER ______________________________ MADKEAAFDDAVEERVINEEYKIWKKNTPF M A D E R V 4 1 0 3 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 14 1 1564.7005 Q09028 Q09028 2 15 RBBP4 Histone-binding protein RBBP4 yes yes 2 9.2845E-17 260.5 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 46724000 46419000 305100 347 1318 356 806;807;808;809;810;811 696;697;698;699;700;701;702 698 7 403800 312640 ADKLAEEHSS QAFYMVGPIEEAVAKADKLAEEHSS_____ EAVAKADKLAEEHSS_______________ K A D S S - 2 0 0 1 0 0 2 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 10 1 1085.4989 P06576 P06576 520 529 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 8.9589E-07 183.43 By MS/MS By matching 8 1.73 2 1 1 2 5 1 11692000 11649000 42485 348 497 357 812;813;814;815;816;817 703;704;705;706;707 705 5 246450 43535 ADKNEVAAEVAK VTKQGNIVRELKAQKADKNEVAAEVAKLLD AQKADKNEVAAEVAKLLDLKKQLAVAEGKP K A D A K L 4 0 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 12 1 1243.6408 P56192 P56192 864 875 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0011171 148.78 By MS/MS 4 0 1 1 1413200 1413200 0 349 1067 358 818 708 708 1 132990 0 ADKQISLPAK ______________________________ ______________________________ M A D A K L 2 0 0 1 0 1 0 0 0 1 1 2 0 0 1 1 0 0 0 0 0 0 10 1 1069.6132 Q9H936 Q9H936 2 11 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 1.0568E-07 191.4 By MS/MS By matching 8 0 2 1 1 12119000 12079000 39989 350 2480 359 819;820 709 709 1 152490 53963 ADKRDPEFVFYDQLK HLSRYLKDVKQHHVKADKRDPEFVFYDQLK ADKRDPEFVFYDQLKQVMNAYRVKPAVFDL K A D L K Q 1 1 0 3 0 1 1 0 0 0 1 2 0 2 1 0 0 0 1 1 0 0 15 2 1869.9261 Q969V3 Q969V3 497 511 NCLN Nicalin yes yes 3 0.0082521 90.725 By MS/MS 6 0 1 1 2773900 2773900 0 351 2096 360 821 710 710 1 19069 0 ADLAECNIK ______________________________ ______________________________ M A D I K V 2 0 1 1 1 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1032.491 P33176 P33176 2 10 KIF5B Kinesin-1 heavy chain yes yes 2 0.0022873 120.87 By MS/MS 4 0 1 1 1610100 1610100 0 352 800 361 822 711 711 1 151520 0 ADLEEQLSDEEKVR ______________________________ MADLEEQLSDEEKVRIAAKFIIHAPPGEFN M A D V R I 1 1 0 2 0 1 4 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1659.7952 P47755 P47755 2 15 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 2 0.00043179 145.81 By MS/MS 7 0 1 1 2512100 2512100 0 353 925 362 823 712;713 713 2 39435 0 ADLEGSLDSK NMLTQQEVPVVILAKADLEGSLDSKIGIPS VILAKADLEGSLDSKIGIPSTSSEDTILAQ K A D S K I 1 0 0 2 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1033.4928 Q15031 Q15031 364 373 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.02414 84.817 By MS/MS 4 0 1 1 2075200 2075200 0 354 1477 363 824 714 714 1 195290 0 ADLIAYLK GTKMIFVGIKKKEERADLIAYLKKATNE__ IKKKEERADLIAYLKKATNE__________ R A D L K K 2 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 905.52222 P99999 P99999 93 100 CYCS Cytochrome c yes yes 2 0.0040963 129.68 By MS/MS 10 0 1 1 454530 454530 0 355 1256 364 825 715 715 1 24497 0 ADLINNLGTIAK ERTLTLVDTGIGMTKADLINNLGTIAKSGT MTKADLINNLGTIAKSGTKAFMEALQAGAD K A D A K S 2 0 2 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1241.698 P07900;Q14568;P08238;Q58FF8 P08238 96 107 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 7.0981E-18 255.52 By MS/MS By MS/MS 4.69 2.54 1 2 3 4 1 1 1 1 1 1 14 2 122400000 122240000 150210 356 521;513 365 826;827;828;829;830;831;832;833;834;835;836;837;838;839;840;841 716;717;718;719;720;721;722;723;724;725;726;727;728 720 12 10554000 191830 ADLIPLLLK QDGSSPLHVAALHGRADLIPLLLKHGANAG AALHGRADLIPLLLKHGANAGARNADQAVP R A D L K H 1 0 0 1 0 0 0 0 0 1 4 1 0 0 1 0 0 0 0 0 0 0 9 0 994.64267 Q96NW4 Q96NW4 757 765 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.033093 83.265 By MS/MS 4.5 0.5 1 1 2 187120 187120 0 357 2205 366 842;843 729 729 1 15329 0 ADLLLSTQPGREEGSPLELER LQASDLPASASLPAKADLLLSTQPGREEGS TQPGREEGSPLELERLKLEPHEGLLLRFPY K A D E R L 1 2 0 1 0 1 4 2 0 0 5 0 0 0 2 2 1 0 0 0 0 0 21 1 2309.1863 P08195 P08195 593 613 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 3 1.1069E-06 195.25 By MS/MS 5 0.816 1 1 1 3 10956000 10956000 0 358 519 367 844;845;846 730;731 731 2 296310 0 ADLPEGVAVSGPSPAEFCR HYMDGQTPCLFVSSKADLPEGVAVSGPSPA EGVAVSGPSPAEFCRKHRLPAPVPFSCAGP K A D C R K 3 1 0 1 1 0 2 2 0 0 1 0 0 1 3 2 0 0 0 2 0 0 19 0 1957.9204 Q8IXI1 Q8IXI1 526 544 RHOT2 Mitochondrial Rho GTPase 2 yes yes 2 0.00017966 158.31 By MS/MS 5 0 1 1 747510 747510 0 359 1876 368 847 732 732 1 7497.2 0 ADLTGISPSPNLYLSK ILQDMGITDIFDETRADLTGISPSPNLYLS DLTGISPSPNLYLSKIIHKTFVEVDENGTQ R A D S K I 1 0 1 1 0 0 0 1 0 1 3 1 0 0 2 3 1 0 1 0 0 0 16 0 1674.8829 Q96P63 Q96P63 328 343 SERPINB12 Serpin B12 yes yes 2 5.8883E-09 166.45 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 1220800 903170 317610 360 2207 369 848;849 733;734 733 2 84994 40428 ADNIFTATER LHLRIFDPSPEDIARADNIFTATERNRIDY EDIARADNIFTATERNRIDYVSSAVRIDHA R A D E R N 2 1 1 1 0 0 1 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 10 0 1136.5462 Q8N3Z3 Q8N3Z3 81 90 GTPBP8 GTP-binding protein 8 yes yes 2 3.0922E-05 160.77 By MS/MS 9 0.816 1 1 1 3 3010000 3010000 0 361 1913 370 850;851;852 735 735 1 42682 0 ADPEVCCFITK ______________________________ ______________________________ M A D T K I 1 0 0 1 2 0 1 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 11 0 1338.5948 Q7Z2W4 Q7Z2W4 2 12 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.00039232 134.57 By MS/MS 6 1.41 1 1 1 1 1 5 4367100 4367100 0 362 1778 371 853;854;855;856;857 736;737 736 2 301250 0 ADPGVLAALCEK LVQRLQEVSLRQGMRADPGVLAALCEKTDN GMRADPGVLAALCEKTDNDIRACINTLQFL R A D E K T 3 0 0 1 1 0 1 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 12 0 1242.6278 Q8WVB6 Q8WVB6 533 544 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.039364 74.962 By MS/MS 3 0 1 1 251850 251850 0 363 2022 372 858 738 738 1 4608.1 0 ADPSILQNLR KLDKEQAALEKIESKADPSILQNLRALVAM KIESKADPSILQNLRALVAMNENLKSQEQE K A D L R A 1 1 1 1 0 1 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 10 0 1125.6142 Q567U6 Q567U6 378 387 CCDC93 Coiled-coil domain-containing protein 93 yes yes 2 0.017949 87.806 By MS/MS 5 0 1 1 1272400 1272400 0 364 1595 373 859 739 739 1 12761 0 ADQFEYVMYGK LDDGEYNPTDDRPSRADQFEYVMYGKVYRI RPSRADQFEYVMYGKVYRIEGDETSTEAAT R A D G K V 1 0 0 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 2 1 0 0 11 0 1349.5962 P52434 P52434 85 95 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2 0.033896 82.029 By MS/MS 10 0 1 1 289180 289180 0 365 1016 374 860 740 740 0 15586 0 ADQFLVGTSR VPDQYGTIRAVAEGKADQFLVGTSRNFILR VAEGKADQFLVGTSRNFILRGTFNDGFQIE K A D S R N 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1092.5564 Q9HC35 Q9HC35 563 572 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.0007839 149.33 By MS/MS 1 0 1 1 0 0 0 366 2510 375 861 741 741 1 0 0 ADQLDYENFR FLTILRATGFDGGNKADQLDYENFRHVVHK DGGNKADQLDYENFRHVVHKWHYKLTKASV K A D F R H 1 1 1 2 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 10 0 1269.5626 Q8NI27 Q8NI27 1085 1094 THOC2 THO complex subunit 2 yes yes 2 0.00089041 125.74 By MS/MS 2.5 0.5 1 1 2 602180 602180 0 367 1971 376 862;863 742 742 1 84658 0 ADQLTEEQIAEFK ______________________________ ______________________________ M A D F K E 2 0 0 1 0 2 3 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1520.7359 P0DP25;P0DP24;P0DP23 P0DP25 2 14 yes no 2 4.0752E-24 276.17 By MS/MS 9.5 0.5 1 1 2 1955700 1955700 0 368 553 377 864;865 743;744 743 2 66540 0 ADRDESSPYAAMLAAQDVAQR GKETICRVTGGMKVKADRDESSPYAAMLAA SPYAAMLAAQDVAQRCKELGITALHIKLRA K A D Q R C 6 2 0 3 0 2 1 0 0 0 1 0 1 0 1 2 0 0 1 1 0 0 21 1 2264.0492 P62263 P62263 64 84 RPS14 40S ribosomal protein S14 yes yes 3 1.7242E-05 157 By MS/MS 10 0 1 1 7828500 7828500 0 369 1147 378 866 745 745 652 1 421930 0 ADSELQLVEQR ______________________________ ______________________________ M A D Q R I 1 1 0 1 0 2 2 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1286.6466 P07741 P07741 2 12 APRT Adenine phosphoribosyltransferase yes yes 2 1.3301E-05 178.54 By MS/MS 9 0 1 1 865030 865030 0 370 511 379 867 746 746 1 17024 0 ADSYYEYLLK SGLFTHLGVFTLGARADSYYEYLLKQWIQG TLGARADSYYEYLLKQWIQGGKQETQLLED R A D L K Q 1 0 0 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 3 0 0 0 10 0 1263.6023 Q9UKM7 Q9UKM7 462 471 MAN1B1 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase yes yes 2 2.2791E-05 166.09 By MS/MS 4.5 0.5 1 1 2 944440 944440 0 371 2761 380 868;869 747 747 1 67751 0 ADTCSFVR VRDGPNKGKSFYVCRADTCSFVRATDIPVS KSFYVCRADTCSFVRATDIPVSHCLLHEDF R A D V R A 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 8 0 954.42292 Q9UNY4 Q9UNY4 34 41 TTF2 Transcription termination factor 2 yes yes 2 0.030906 89.752 By MS/MS 3 0 1 1 379030 379030 0 372 2795 381 870 748 748 1 6935.2 0 ADTLTDEINFLR DVDAAYMNKVELQAKADTLTDEINFLRALY QAKADTLTDEINFLRALYDAELSQMQTHIS K A D L R A 1 1 1 2 0 0 1 0 0 1 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1406.7042 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 288 299 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 9.8272E-14 213.8 By MS/MS By MS/MS 4.64 2.69 2 2 2 1 1 2 2 1 1 7 7 9120500 7847000 1273500 + 373 44;56;40 382 871;872;873;874;875;876;877;878;879;880;881;882;883;884 749;750;751;752;753;754;755;756;757;758;759;760;761;762;763 754 15 286140 1374000 ADTLTLEER KRLSKVVNIVPVIAKADTLTLEERVHFKQR VPVIAKADTLTLEERVHFKQRITADLLSNG K A D E R V 1 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1046.5244 Q9UHD8 Q9UHD8 446 454 SEPT9 Septin-9 yes yes 2 0.0010691 133.13 By MS/MS 5 0 1 1 993740 993740 0 374 2730 383 885 764 764 1 9966.7 0 ADTLTLK KAIHNKVNIVPVIAKADTLTLKERERLKKR NIVPVIAKADTLTLKERERLKKRILDEIEE K A D L K E 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 7 0 760.43307 Q15019 Q15019 184 190 SEPT2 Septin-2 yes yes 2 0.042447 95.352 By MS/MS 7 0 1 1 738870 738870 0 375 1472 384 886 765 765 1 11599 0 ADTQTYQPYNK DFIDDLADLSCLVYRADTQTYQPYNKDWIK LVYRADTQTYQPYNKDWIKEKIYVLLRRQA R A D N K D 1 0 1 1 0 2 0 0 0 0 0 1 0 0 1 0 2 0 2 0 0 0 11 0 1327.6044 P84090 P84090 74 84 ERH Enhancer of rudimentary homolog yes yes 2 2.1316E-05 162.64 By MS/MS 10 0 1 1 187990 187990 0 376 1245 385 887 766 766 1 10132 0 ADTSSQGALVFLSK GALSLEPSHIGDLQKADTSSQGALVFLSKD KADTSSQGALVFLSKDYEIESQNPLASPTN K A D S K D 2 0 0 1 0 1 0 1 0 0 2 1 0 1 0 3 1 0 0 1 0 0 14 0 1422.7355 Q7Z417 Q7Z417 604 617 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0002958 187.78 By MS/MS 5 0 1 1 935990 935990 0 377 1789 386 888 767 767 1 9387.5 0 ADTVGLACEAINR SLETIGPLMNGMKKRADTVGLACEAINRMF KRADTVGLACEAINRMFQKEQSELVAQALK R A D N R M 3 1 1 1 1 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 13 0 1388.6718 O75165 O75165 2103 2115 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 5.503E-18 269.33 By MS/MS 2 0 1 1 1148900 1148900 0 378 302 387 889 768 768 1 388600 0 ADVIQATGDAICIFR GVDPVEAFAQNVLSKADVIQATGDAICIFR ADVIQATGDAICIFRELQCLTPRGRYDIRI K A D F R E 3 1 0 2 1 1 0 1 0 3 0 0 0 1 0 0 1 0 0 1 0 0 15 0 1648.8243 Q08945 Q08945 189 203 SSRP1 FACT complex subunit SSRP1 yes yes 2 5.7623E-24 282.92 By MS/MS 5.75 1.48 1 1 1 1 4 1297200 1297200 0 379 1313 388 890;891;892;893 769;770 769 2 26353 0 ADVIVLAGTVCDFR HPLHIRENRSAALKKADVIVLAGTVCDFRL KADVIVLAGTVCDFRLSYGRVLSHSSKIII K A D F R L 2 1 0 2 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 3 0 0 14 0 1534.7814 A1L0T0 A1L0T0 344 357 ILVBL Acetolactate synthase-like protein yes yes 2 0.00044092 161.19 By MS/MS 6 0 1 1 827270 827270 0 380 9 389 894 771 771 1 5686.8 0 ADVLFIAPR ILIFSLIVTYCINAKADVLFIAPREPGAVS YCINAKADVLFIAPREPGAVSY________ K A D P R E 2 1 0 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 9 0 1000.5706 Q92542 Q92542 694 702 NCSTN Nicastrin yes yes 2 0.0010365 133.55 By MS/MS 3.5 0.5 1 1 2 825350 825350 0 381 2052 390 895;896 772;773 772 2 61864 0 ADVLSEEAILK HFMKAFQKIVVLFYKADVLSEEAILKWYKE LFYKADVLSEEAILKWYKEAHVAKGKSVFL K A D L K W 2 0 0 1 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1186.6445 Q9Y6E2 Q9Y6E2 370 380 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.035402 90.108 By MS/MS 7 0 1 1 503560 503560 0 382 2942 391 897 774 774 1 7905 0 ADVLSVLR ______________________________ ______________________________ M A D L R Q 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 8 0 871.51272 Q6P1J9 Q6P1J9 2 9 CDC73 Parafibromin yes yes 2 0.031165 91.069 By MS/MS 5.5 0.5 1 1 2 598030 598030 0 383 1698 392 898;899 775 775 1 4209.5 0 ADVQSIIGLQR VGRMFKQFNKLTEDKADVQSIIGLQRFFET TEDKADVQSIIGLQRFFETRMNEAFGDTKF K A D Q R F 1 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1198.667 Q13263 Q13263 780 790 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0081919 95.483 By MS/MS 4 0 1 1 12973000 12973000 0 384 1367 393 900 776 776 1 1220900 0 ADVVVGKDK ______________________________ ______________________________ M A D D K G 1 0 0 2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 3 0 0 9 1 929.5182 Q9NRG0 Q9NRG0 2 10 CHRAC1 Chromatin accessibility complex protein 1 yes yes 2 0.026296 85.862 By MS/MS 10 0 1 1 267580 267580 0 385 2551 394 901 777 777 1 14421 0 ADVVVGKDKGGEQR ______________________________ MADVVVGKDKGGEQRLISLPLSRIRVIMKS M A D Q R L 1 1 0 2 0 1 1 3 0 0 0 2 0 0 0 0 0 0 0 3 0 0 14 2 1456.7634 Q9NRG0 Q9NRG0 2 15 CHRAC1 Chromatin accessibility complex protein 1 yes yes 3 0.0022037 97.463 By MS/MS 10 0 1 1 164530 164530 0 386 2551 395 902 778 778 1 8867.3 0 ADYTSHLR QAAAIILNIYCSRSKADYTSHLRSLVSGLI IYCSRSKADYTSHLRSLVSGLIRLFNDSSP K A D L R S 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 0 8 0 961.46174 Q92616 Q92616 2184 2191 GCN1L1 Translational activator GCN1 yes yes 2 0.041604 69.825 By MS/MS 2.5 0.5 1 1 2 730200 730200 0 387 2064 396 903;904 779 779 1 207060 0 AEAALLLLPEAAAERDAR ______________________________ ALLLLPEAAAERDAREKLALWDRRPDTTAP M A E A R E 7 2 0 1 0 0 3 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 18 1 1879.0163 Q96JB2 Q96JB2 2 19 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2;3 0.00016568 174.94 By MS/MS 4 0 2 2 276970 276970 0 388 2176 397 905;906 780;781 780 2 26064 0 AEAALLLLPEAAAERDAREK ______________________________ LLLPEAAAERDAREKLALWDRRPDTTAPLT M A E E K L 7 2 0 1 0 0 4 0 0 0 4 1 0 0 1 0 0 0 0 0 0 0 20 2 2136.1539 Q96JB2 Q96JB2 2 21 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 3 0.024808 54.288 By MS/MS 4 0 1 1 62261 62261 0 389 2176 398 907 782 782 1 5859.1 0 AEAEAQAEELSFPR VGDLAQFMVQNGLSRAEAEAQAEELSFPRS RAEAEAQAEELSFPRSVVEFLQGYIGVPHG R A E P R S 4 1 0 0 0 1 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 14 0 1546.7264 P11498 P11498 929 942 PC Pyruvate carboxylase, mitochondrial yes yes 2 1.0105E-23 272.65 By MS/MS 4 0.816 1 1 1 3 4762300 4762300 0 390 580 399 908;909;910 783;784 783 2 167970 0 AEAERPEEQAEASGLKK PGTGGPEDVLQPVQRAEAERPEEQAEASGL AERPEEQAEASGLKKETDVVLKVDAQEAKT R A E K K E 4 1 0 0 0 1 5 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 17 2 1841.9119 Q02952 Q02952 1072 1088 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0046952 137.27 By MS/MS By matching 1.33 0.471 2 1 2 1 390240 373590 16650 391 1283 400 911;912;913 785 785 1 105480 16650 AEAESLYQSK AEVKAQYEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 1124.535 CON__P04264;P04264 P04264 367 376 KRT1 Keratin, type II cytoskeletal 1 no no 2 9.9145E-17 232.83 By MS/MS By MS/MS 5.12 2.7 2 2 5 3 3 2 2 2 2 2 11 14 65749000 37021000 28728000 + 392 471;45 401 914;915;916;917;918;919;920;921;922;923;924;925;926;927;928;929;930;931;932;933;934;935;936;937;938 786;787;788;789;790;791;792;793;794;795;796;797;798;799;800;801;802;803;804;805;806;807;808;809;810;811;812;813;814;815;816;817;818;819;820;821;822 787 36 2554100 19459000 AEAESLYQSKYEELQITAGR AEVKAQYEDIAQKSKAEAESLYQSKYEELQ LYQSKYEELQITAGRHGDSVRNSKIEISEL K A E G R H 3 1 0 0 0 2 4 1 0 1 2 1 0 0 0 2 1 0 2 0 0 0 20 1 2285.1176 CON__P04264;P04264 P04264 367 386 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 4.5274E-17 252.12 By MS/MS By MS/MS 4.73 2.68 3 3 2 3 2 4 1 1 2 1 8 14 29916000 20232000 9683600 + 393 471;45 402 939;940;941;942;943;944;945;946;947;948;949;950;951;952;953;954;955;956;957;958;959;960 823;824;825;826;827;828;829;830;831;832;833;834;835;836;837;838;839;840;841;842;843;844;845;846;847;848;849;850 827 28 703080 5211200 AEAGAGSATEFQFR DTYRRSAVPPGADKKAEAGAGSATEFQFRG KAEAGAGSATEFQFRGGFGRGRGQPPQ___ K A E F R G 4 1 0 0 0 1 2 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 14 0 1440.6634 P46783;Q9NQ39 P46783 140 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 6.5264E-33 303.31 By MS/MS By MS/MS 9 0.632 1 3 1 4 1 70054000 69647000 406990 394 920 403 961;962;963;964;965 851;852;853;854;855;856 853 6 1491600 928070 AEAGDAVVAKPGVWAR ______________________________ EAGDAVVAKPGVWARLGSWARALLRDYAEA R A E A R L 5 1 0 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 3 0 0 16 1 1595.842 Q9BSF4 Q9BSF4 15 30 C19orf52 Uncharacterized protein C19orf52 yes yes 3 0.00044632 126.32 By MS/MS 8 0 1 1 1770400 1770400 0 395 2305 404 966 857 857 1 22351 0 AEAGDNLGALVR TVVTGIEMFHKSLERAEAGDNLGALVRGLK LERAEAGDNLGALVRGLKREDLRRGLVMVK R A E V R G 3 1 1 1 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1184.6149 P49411 P49411 316 327 TUFM Elongation factor Tu, mitochondrial yes yes 2 2.1632E-13 215.72 By MS/MS By MS/MS 7.5 1.32 2 3 1 1 1 6 2 125010000 124160000 851720 396 949 405 967;968;969;970;971;972;973;974 858;859;860;861;862;863;864 858 5 1899900 1421500 AEAGLGALPR ______________________________ ASRLRAEAGLGALPRRALAQYLLFLRLYPV R A E P R R 3 1 0 0 0 0 1 2 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 953.52943 Q9NR77 Q9NR77 10 19 PXMP2 Peroxisomal membrane protein 2 yes yes 2 0.0010569 122.52 By MS/MS 9 0 1 1 537050 537050 0 397 2549 406 975 865 865 1 10569 0 AEAGVPAEFSIWTR GGAHKVRAGGPGLERAEAGVPAEFSIWTRE RAEAGVPAEFSIWTREAGAGGLAIAVEGPS R A E T R E 3 1 0 0 0 0 2 1 0 1 0 0 0 1 1 1 1 1 0 1 0 0 14 0 1532.7623 P21333 P21333 2251 2264 FLNA Filamin-A yes yes 2 0.0095656 91.123 By MS/MS 3 1.58 1 1 1 1 4 475010 475010 0 398 677 407 976;977;978;979 866;867 867 2 56757 0 AEAIVYK GMAFSKSEGKRKTAKAEAIVYKHGSGRIKV EGKRKTAKAEAIVYKHGSGRIKVNGIDYQL K A E Y K H 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 7 0 792.43815 P82933 P82933 281 287 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.017961 114.72 By MS/MS 7 0 1 1 3142000 3142000 0 399 1239 408 980 868 868 1 49324 0 AEAIVYKHGSGR GMAFSKSEGKRKTAKAEAIVYKHGSGRIKV TAKAEAIVYKHGSGRIKVNGIDYQLYFPIT K A E G R I 2 1 0 0 0 0 1 2 1 1 0 1 0 0 0 1 0 0 1 1 0 0 12 1 1286.6731 P82933 P82933 281 292 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 0.019313 79.659 By MS/MS 7 0 1 1 1068600 1068600 0 400 1239 409 981 869 869 1 16775 0 AEALTEPLNA KRQESQLRKPENTTRAEALTEPLNA_____ ENTTRAEALTEPLNA_______________ R A E N A - 3 0 1 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1027.5186 Q9NX76 Q9NX76 174 183 CMTM6 CKLF-like MARVEL transmembrane domain-containing protein 6 yes yes 2 0.011095 91.867 By MS/MS 9 0 1 1 1911700 1911700 0 401 2622 410 982 870 870 1 37622 0 AEALVLMGTK GDEMNLHLPQTEEAKAEALVLMGTKANLVT TEEAKAEALVLMGTKANLVTPRNGEPLIAA K A E T K A 2 0 0 0 0 0 1 1 0 0 2 1 1 0 0 0 1 0 0 1 0 0 10 0 1031.5685 O14802 O14802 517 526 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.029435 82.261 By MS/MS 3 0 1 1 203910 203910 0 402 139 411 983 871 871 1 3731 0 AEASGGLGGLTR RELPLRLADFGALHRAEASGGLGGLTRLRC LHRAEASGGLGGLTRLRCFQQDDAHIFCTT R A E T R L 2 1 0 0 0 0 1 4 0 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1087.5622 Q9BW92 Q9BW92 439 450 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 6.8443E-05 161.67 By MS/MS By matching 5 1.67 1 2 1 1 4 1 12273000 12201000 71639 403 2346 412 984;985;986;987;988 872;873 873 1 157770 60162 AEASQLGHK QEISHLIEPLANAARAEASQLGHKVSQMAQ LANAARAEASQLGHKVSQMAQYFEPLTLAA R A E H K V 2 0 0 0 0 1 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 939.47739 Q9Y490 Q9Y490 1722 1730 TLN1 Talin-1 yes yes 2 0.0013614 129.42 By MS/MS 2.5 0.5 1 1 2 762380 762380 0 404 2888 413 989;990 874 874 1 225820 0 AEATVIPSR ______________________________ ______________________________ K A E S R C 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 9 0 942.51345 Q96PG2 Q96PG2 3 11 MS4A10 Membrane-spanning 4-domains subfamily A member 10 yes yes 2 0.011515 113.41 By matching By MS/MS 4.43 3.06 1 1 2 1 1 1 3 4 3580800 1203500 2377300 405 2209 414 991;992;993;994;995;996;997 875;876;877 876 3 54445 2261300 AEDAVEAIR ECDIVKDYAFVHMERAEDAVEAIRGLDNTE FVHMERAEDAVEAIRGLDNTEFQGKRMHVQ R A E I R G 3 1 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 972.48762 Q9BWF3;Q9BQ04 Q9BWF3 121 129 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.0047215 109.71 By MS/MS 7 0 1 1 558300 558300 0 406 2347 415 998 878 878 1 8764.2 0 AEDGSVIDYELIDQDAR GDFRKLMVALAKGRRAEDGSVIDYELIDQD DGSVIDYELIDQDARDLYDAGVKRKGTDVP R A E A R D 2 1 0 4 0 1 2 1 0 2 1 0 0 0 0 1 0 0 1 1 0 0 17 0 1907.8749 P07355 P07355 180 196 ANXA2 Annexin A2 yes yes 2 5.7793E-11 234.04 By MS/MS 7 0 1 1 302280 302280 0 407 508 416 999 879 879 1 4745.3 0 AEDKEWMPVTK RGRGRGRGRGARGGKAEDKEWMPVTKLGRL RGGKAEDKEWMPVTKLGRLVKDMKIKSLEE K A E T K L 1 0 0 1 0 0 2 0 0 0 0 2 1 0 1 0 1 1 0 1 0 0 11 1 1332.6384 P15880 P15880 55 65 RPS2 40S ribosomal protein S2 yes yes 2;3 0.0085009 107.34 By MS/MS 8 0 3 3 8178000 8178000 0 408 627 417;418 1000;1001;1002 880;881;882 882 298 3 103250 0 AEDNADTLALVFEAPNQEK KILKCAGNEDIITLRAEDNADTLALVFEAP ADTLALVFEAPNQEKVSDYEMKLMDLDVEQ R A E E K V 4 0 2 2 0 1 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 19 0 2073.9855 P12004 P12004 92 110 PCNA Proliferating cell nuclear antigen yes yes 2 8.5244E-34 296.27 By MS/MS 7.5 0.5 1 1 2 735360 735360 0 409 587 419 1003;1004 883 883 1 9934.4 0 AEEDEILNR DGGTVSQEEEDRKPKAEEDEILNRSPRNRK EDRKPKAEEDEILNRSPRNRKPRRE_____ K A E N R S 1 1 1 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1087.5146 P27824 P27824 574 582 CANX Calnexin yes yes 2 0.00038098 150.36 By MS/MS 4 0 1 1 917560 917560 0 410 747 420 1005 884 884 1 86348 0 AEEENEFQIPGR LRQMSDLRLQANWNRAEEENEFQIPGRTRP WNRAEEENEFQIPGRTRPSSDQLKEASGTD R A E G R T 1 1 1 0 0 1 4 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 12 0 1417.6474 Q8N0X7 Q8N0X7 342 353 SPG20 Spartin yes yes 2 0.00041465 136.49 By MS/MS 4 0 1 1 1442700 1442700 0 411 1897 421 1006 885 885 1 135770 0 AEEEVAKLEK ______________________________ ______________________________ M A E E K H 2 0 0 0 0 0 4 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 10 1 1144.5976 Q9P2R3 Q9P2R3 2 11 ANKFY1 Rabankyrin-5 yes yes 2 0.00025338 142.98 By MS/MS By matching 2.75 1.09 1 2 1 3 1 4482400 4342400 140070 412 2689 422 1007;1008;1009;1010 886;887 887 1 158590 17829 AEEFDQIK DAHKTEGDIFAIVSKAEEFDQIKVREEEIE IFAIVSKAEEFDQIKVREEEIEELDTLLSN K A E I K V 1 0 0 1 0 1 2 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 978.46583 Q8N3C0 Q8N3C0 1018 1025 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.016025 104.06 By MS/MS 1.5 0.5 1 1 2 425190 425190 0 413 1911 423 1011;1012 888 888 1 117700 0 AEEGFTQVTR ______________________________ TQSARAEEGFTQVTRKGGRRAKKRQAEQLS R A E T R K 1 1 0 0 0 1 2 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1136.5462 Q9NRX1 Q9NRX1 12 21 PNO1 RNA-binding protein PNO1 yes yes 2 2.497E-05 164.66 By MS/MS 8 0 1 1 1376400 1376400 0 414 2560 424 1013 889 889 1 17377 0 AEEGIAAGGVMDVNTALQEVLK ______________________________ GGVMDVNTALQEVLKTALIHDGLARGIREA M A E L K T 4 0 1 1 0 1 3 3 0 1 2 1 1 0 0 0 1 0 0 3 0 0 22 0 2214.1202 P25398 P25398 2 23 RPS12 40S ribosomal protein S12 yes yes 3 8.224E-05 106.49 By MS/MS 10 0 2 2 200320 200320 0 415 721 425 1014;1015 890;891 890 357 2 10797 0 AEEIEHYAR TQLTVEKVMDWYQTRAEEIEHYARQVDCAL DWYQTRAEEIEHYARQVDCALSLIRLGMER R A E A R Q 2 1 0 0 0 0 3 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1116.52 A2RRP1 A2RRP1 850 858 NBAS Neuroblastoma-amplified sequence yes yes 2 0.047151 86.67 By MS/MS 1 0 1 1 0 0 0 416 11 426 1016 892 892 1 0 0 AEEILEK RNEKIAVHCTVRGAKAEEILEKGLKVREYE HCTVRGAKAEEILEKGLKVREYELRKNNFS K A E E K G 1 0 0 0 0 0 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 830.43855 P62913 P62913 79 85 RPL11 60S ribosomal protein L11 yes yes 2 0.0045949 157.21 By MS/MS By matching 9 0 2 1 1 4659800 4590700 69114 417 1186 427 1017;1018 893 893 1 90346 157600 AEELGLPILGVLR VSDGAAAILLARRSKAEELGLPILGVLRSY SKAEELGLPILGVLRSYAVVGVPPDIMGIG K A E L R S 1 1 0 0 0 0 2 2 0 1 4 0 0 0 1 0 0 0 0 1 0 0 13 0 1378.8184 P09110 P09110 293 305 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 0.001256 121.5 By MS/MS 7 0 1 1 44653 44653 0 418 532 428 1019 894 894 1 700.97 0 AEEYEFLTPVEEAPK KIDKTDYMVGSYGPRAEEYEFLTPVEEAPK AEEYEFLTPVEEAPKGMLARGSYSIKSRFT R A E P K G 2 0 0 0 0 0 5 0 0 0 1 1 0 1 2 0 1 0 1 1 0 0 15 0 1750.8301 P52565 P52565 153 167 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 2 2.1601E-05 234.3 By MS/MS 8 0 1 1 912590 912590 0 419 1018 429 1020 895 895 1 11521 0 AEFEEQNVR AISDHLKSKTHTKRKAEFEEQNVRKKQRPL THTKRKAEFEEQNVRKKQRPLTASLQCNST K A E V R K 1 1 1 0 0 1 3 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1120.5149 Q9UFW8 Q9UFW8 72 80 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.0016116 126.24 By MS/MS 9 0 1 1 164440 164440 0 420 2716 430 1021 896 896 1 3236.2 0 AEFGDFDIK MLFSSGTVQLTTTSRAEFGDFDIKTVLQEI LTTTSRAEFGDFDIKTVLQEIKRGKRMKCT R A E I K T 1 0 0 2 0 0 1 1 0 1 0 1 0 2 0 0 0 0 0 0 0 0 9 0 1040.4815 Q8IWS0 Q8IWS0 258 266 PHF6 PHD finger protein 6 yes yes 2 0.00177 124.23 By MS/MS 7 0 1 1 2436400 2436400 0 421 1869 431 1022 897 897 1 38247 0 AEFLDDQETR ______________________________ ______________________________ M A E T R L 1 1 0 2 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1222.5466 O14545 O14545 2 11 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 0.012287 92.239 By MS/MS 5 0 1 1 1172600 1172600 0 422 125 432 1023 898 898 1 11761 0 AEFTSPPSLFK RTGNSEKETALPSTKAEFTSPPSLFKTGLP PSTKAEFTSPPSLFKTGLPPSRNSTSSQSQ K A E F K T 1 0 0 0 0 0 1 0 0 0 1 1 0 2 2 2 1 0 0 0 0 0 11 0 1222.6234 Q6UN15 Q6UN15 255 265 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2 0.0079533 104.2 By MS/MS 5 0 1 1 517080 517080 0 423 1730 433 1024 899 899 1 5186.1 0 AEFTSYKETASSR ______________________________ ______________________________ M A E S R H 2 1 0 0 0 0 2 0 0 0 0 1 0 1 0 3 2 0 1 0 0 0 13 1 1475.6892 Q86V48 Q86V48 2 14 LUZP1 Leucine zipper protein 1 yes yes 2 0.00040088 140.63 By MS/MS 3 0 1 1 718490 718490 0 424 1827 434 1025 900 900 1 13146 0 AEFTVETR YGPGIEPTGNMVKKRAEFTVETRSAGQGEV GNMVKKRAEFTVETRSAGQGEVLVYVEDPA R A E T R S 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 8 0 951.46616 P21333 P21333 302 309 FLNA Filamin-A yes yes 2 0.00032606 163.99 By MS/MS 1.5 0.5 1 1 2 1275000 1275000 0 425 677 435 1026;1027 901;902 902 2 368830 0 AEFVEVTK LKAWSVARLSQKFPKAEFVEVTKLVTDLTK LSQKFPKAEFVEVTKLVTDLTKVHKECCHG K A E T K L 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 8 0 921.48075 CON__P02769 CON__P02769 249 256 yes yes 2 0.018551 101.25 By MS/MS 6 0.816 1 1 1 3 4634600 4634600 0 + 426 43 436 1028;1029;1030 903;904 903 2 42984 0 AEGDISNVANGFK GKETTNIFSNCGCVRAEGDISNVANGFKSH VRAEGDISNVANGFKSHLIRLIGNLCYKNK R A E F K S 2 0 2 1 0 0 1 2 0 1 0 1 0 1 0 1 0 0 0 1 0 0 13 0 1320.631 Q9UBB4 Q9UBB4 359 371 ATXN10 Ataxin-10 yes yes 2 0.00013473 169.82 By MS/MS 7 0 1 1 1299200 1299200 0 427 2693 437 1031 905;906;907 906 3 20396 0 AEGGAADLDTQRSDIATLLK ______________________________ ADLDTQRSDIATLLKTSLRKGDTWYLVDSR M A E L K T 4 1 0 3 0 1 1 2 0 1 3 1 0 0 0 1 2 0 0 0 0 0 20 1 2044.0437 Q9Y4E8 Q9Y4E8 2 21 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 1.8328E-05 152.11 By MS/MS 4 0 1 1 185680 185680 0 428 2893 438 1032 908 908 1 17474 0 AEGGYFGQIR TMEQLEAMTGGEQLKAEGGYFGQIRNTKKS GEQLKAEGGYFGQIRNTKKSSQRLKDALLD K A E I R N 1 1 0 0 0 1 1 3 0 1 0 0 0 1 0 0 0 0 1 0 0 0 10 0 1096.5302 Q8NI27 Q8NI27 711 720 THOC2 THO complex subunit 2 yes yes 2 0.001416 120.99 By MS/MS 2.5 0.5 1 1 2 702620 702620 0 429 1971 439 1033;1034 909 909 1 87868 0 AEGLGEAEVR ASLRDRRLPLGPCPRAEGLGEAEVRTLLQR GPCPRAEGLGEAEVRTLLQRSVQRLPAGWT R A E V R T 2 1 0 0 0 0 3 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1029.5091 Q562E7 Q562E7 79 88 WDR81 WD repeat-containing protein 81 yes yes 2 8.6476E-05 154.85 By MS/MS 2 0 1 1 422490 422490 0 430 1593 440 1035 910 910 1 142900 0 AEGLQVGQDAR RIREFSLAGGIWHGRAEGLQVGQDARVLGG WHGRAEGLQVGQDARVLGGE__________ R A E A R V 2 1 0 1 0 2 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1142.568 Q8WWM7 Q8WWM7 1060 1070 ATXN2L Ataxin-2-like protein yes yes 2 0.00021764 145.91 By MS/MS 3 0 1 1 278280 278280 0 431 2036 441 1036 911 911 1 5091.8 0 AEGPEVDVNLPK MPKMKMPKFSVPGFKAEGPEVDVNLPKADV GFKAEGPEVDVNLPKADVDISGPKIDVTAP K A E P K A 1 0 1 1 0 0 2 1 0 0 1 1 0 0 2 0 0 0 0 2 0 0 12 0 1266.6456 Q09666 Q09666 764 775 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.0012306 96.229 By MS/MS 1.5 0.5 1 1 2 450870 450870 0 432 1320 442 1037;1038 912 912 1 121950 0 AEGPGRGDEPSPS QDAVQQHQQKMCWLKAEGPGRGDEPSPS__ LKAEGPGRGDEPSPS_______________ K A E P S - 1 1 0 1 0 0 2 3 0 0 0 0 0 0 3 2 0 0 0 0 0 0 13 1 1254.5477 Q9NVI7 Q9NVI7 622 634 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.0083507 113.67 By MS/MS 5 0 1 1 2048400 2048400 0 433 2598 443 1039 913 913 1 20544 0 AEGSSTASSGSQLAEGK HSEPQARGDPGDQTKAEGSSTASSGSQLAE GSSTASSGSQLAEGKGSQMGTVQPIPCLLS K A E G K G 3 0 0 0 0 1 2 3 0 0 1 1 0 0 0 5 1 0 0 0 0 0 17 0 1565.7169 Q9NZB2 Q9NZB2 503 519 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 4.8299E-07 240.18 By MS/MS 3 0 1 1 674420 674420 0 434 2647 444 1040 914 914 1 12340 0 AEHIPSGPLR GHTRDYPQYRDNKPRAEHIPSGPLRQREES DNKPRAEHIPSGPLRQREESETRSESSDFE R A E L R Q 1 1 0 0 0 0 1 1 1 1 1 0 0 0 2 1 0 0 0 0 0 0 10 0 1075.5774 Q9Y520 Q9Y520 1228 1237 PRRC2C Protein PRRC2C yes yes 3 0.0039541 120.27 By MS/MS 2 0.816 1 1 1 3 1448800 1448800 0 435 2905 445 1041;1042;1043 915;916 916 2 413400 0 AEIDLVCELAK VPVVVALNVFKTDTRAEIDLVCELAKRAGA TDTRAEIDLVCELAKRAGAFDAVPCYHWSV R A E A K R 2 0 0 1 1 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1259.6431 Q6UB35 Q6UB35 808 818 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 9.2528E-05 152.54 By MS/MS By matching 4.33 0.471 2 1 2 1 4764600 4730600 33969 436 1728 446 1044;1045;1046 917;918 917 2 420980 72376 AEIDNVKK KHEISEMNRMIQRLRAEIDNVKKQCANLQN RMIQRLRAEIDNVKKQCANLQNAIADAEQR R A E K K Q 1 0 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 8 1 915.50255 CON__P13647;P13647 CON__P13647 398 405 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.0025746 153.04 By MS/MS 3 0 1 1 743620 0 743620 + 437 52 447 1047 919 919 1 0 94651 AEIEHKKEELR THGAEEIRGLERQVRAEIEHKKEELRQMVG RQVRAEIEHKKEELRQMVGERYRDLIEAAD R A E L R Q 1 1 0 0 0 0 4 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 11 2 1380.7361 Q8WTW3 Q8WTW3 39 49 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 3 0.0062618 97.734 By MS/MS 4 0 1 1 886940 886940 0 438 2010 448 1048 920 920 1 83467 0 AEIELFVNR PVNFCDEEKKSDECKAEIELFVNRLDSVES KSDECKAEIELFVNRLDSVESVLPYEYTAF K A E N R L 1 1 1 0 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1089.5819 Q99805 Q99805 58 66 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 2 0.014159 93.143 By MS/MS 1 0 1 1 88173 88173 0 439 2269 449 1049 921;922 921 2 21247 0 AEIGIAMGSGTAVAK AMTGDGVNDAPALKKAEIGIAMGSGTAVAK AEIGIAMGSGTAVAKTASEMVLADDNFSTI K A E A K T 4 0 0 0 0 0 1 3 0 2 0 1 1 0 0 1 1 0 0 1 0 0 15 0 1374.7177 P16615;O14983;Q93084 P16615 713 727 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 4.4389E-05 193.62 By MS/MS 2 0.707 1 2 1 4 2031000 2031000 0 440 635 450;451 1050;1051;1052;1053 923;924;925;926 923 307 4 514330 0 AEIISLCK TCSLFMRNIAPNISRAEIISLCKRYPGFMR IAPNISRAEIISLCKRYPGFMRVALSEPQP R A E C K R 1 0 0 0 1 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 8 0 932.5001 Q9BXP5 Q9BXP5 435 442 SRRT Serrate RNA effector molecule homolog yes yes 2 0.036301 87.696 By MS/MS 3.5 0.5 1 1 2 1166800 1166800 0 441 2358 452 1054;1055 927 927 1 60813 0 AEIQELAMVPR GDEMNLHLPQSLETRAEIQELAMVPRMIVT LETRAEIQELAMVPRMIVTPQSNRPVMGIV R A E P R M 2 1 0 0 0 1 2 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 11 0 1255.6595 P24928 P24928 513 523 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0086159 94.363 By MS/MS 2 0 1 1 187450 187450 0 442 717 453 1056 928 928 1 63403 0 AEITDAEGLGLK PSKPPPVELRAAALRAEITDAEGLGLKLED ALRAEITDAEGLGLKLEDRETVIKELKKSL R A E L K L 2 0 0 1 0 0 2 2 0 1 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1215.6347 Q14203 Q14203 933 944 DCTN1 Dynactin subunit 1 yes yes 2 1.9005E-08 205.59 By MS/MS 3 0 1 1 1366400 1366400 0 443 1432 454 1057 929 929 1 25001 0 AEITLVATKPEK MKSIPLAMAPVFEQKAEITLVATKPEKLAP EQKAEITLVATKPEKLAPSRQDIFQEQLAA K A E E K L 2 0 0 0 0 0 2 0 0 1 1 2 0 0 1 0 2 0 0 1 0 0 12 1 1298.7446 Q9UBF2 Q9UBF2 591 602 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00042089 157.97 By MS/MS 4.5 0.5 1 1 2 5669400 5669400 0 444 2697 455 1058;1059 930 930 1 465780 0 AEKDNAEIR HNPKIALLNVELELKAEKDNAEIRVHTVED VELELKAEKDNAEIRVHTVEDYQAIVDAEW K A E I R V 2 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 1 1044.52 Q99832 Q99832 248 256 CCT7 T-complex protein 1 subunit eta yes yes 3 0.0097075 90.15 By MS/MS 7 0 1 1 711750 711750 0 445 2270 456 1060 931 931 1 11173 0 AELALSLLQETPR VRRLLAVYALPSWGRAELALSLLQETPRNY GRAELALSLLQETPRNYELGDVVEAVRHSQ R A E P R N 2 1 0 0 0 1 2 0 0 0 4 0 0 0 1 1 1 0 0 0 0 0 13 0 1439.7984 Q96EP0 Q96EP0 659 671 RNF31 E3 ubiquitin-protein ligase RNF31 yes yes 2 0.00018452 164.48 By MS/MS 4 0 1 1 133180 133180 0 446 2147 457 1061 932 932 1 12533 0 AELAPPAPPLPPLPPER DNPQPEMAPPVHEPRAELAPPAPPLPPLPP LAPPAPPLPPLPPERTSGIGDSRPPSFHPN R A E E R T 3 1 0 0 0 0 2 0 0 0 3 0 0 0 8 0 0 0 0 0 0 0 17 0 1760.9825 O14641 O14641 108 124 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 2 0.04017 71.085 By MS/MS 4 0 1 1 207280 207280 0 447 128 458 1062 933 933 0 19507 0 AELGAGAPPAVVAR ______________________________ RAELGAGAPPAVVARTPPEPRPSPEGDPSP R A E A R T 5 1 0 0 0 0 1 2 0 0 1 0 0 0 2 0 0 0 0 2 0 0 14 0 1277.7092 Q3KQU3 Q3KQU3 7 20 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.00034436 166.34 By MS/MS 3 0 1 1 1086700 1086700 0 448 1575 459 1063 934 934 1 19884 0 AELGAGGDGHR ______________________________ ______________________________ M A E H R G 2 1 0 1 0 0 1 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1038.4843 Q14244 Q14244 2 12 MAP7 Ensconsin yes yes 2 0.0046585 106.18 By MS/MS 4 0 1 1 718450 718450 0 449 1434 460 1064 935 935 1 67611 0 AELGAGGDGHRGGDGAVR ______________________________ GAGGDGHRGGDGAVRSETAPDSYKVQDKKN M A E V R S 3 2 0 2 0 0 1 7 1 0 1 0 0 0 0 0 0 0 0 1 0 0 18 1 1650.7822 Q14244 Q14244 2 19 MAP7 Ensconsin yes yes 3 0.037851 43.791 By MS/MS 4 0 1 1 582560 582560 0 450 1434 461 1065 936 936 1 54823 0 AELGEADEAELQR ______________________________ ______________________________ M A E Q R L 3 1 0 1 0 1 4 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 13 0 1429.6685 Q9Y5J9 Q9Y5J9 2 14 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 1.4238E-17 267.39 By MS/MS By MS/MS 10 0 2 1 1 6541100 6474500 66581 451 2911 462 1066;1067 937;938 938 2 348950 85242 AELIQKK ______________________________ ______________________________ M A E K K L 1 0 0 0 0 1 1 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 7 1 828.5069 O15212 O15212 2 8 PFDN6 Prefoldin subunit 6 yes yes 2 0.052715 97.602 By MS/MS 10 0 1 1 2924900 2924900 0 452 170 463 1068 939 939 1 157640 0 AELIVQPELK TIQELLQNCSDCLMRAELIVQPELKYGDGI DCLMRAELIVQPELKYGDGIQLTRSRELDE R A E L K Y 1 0 0 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1138.6598 P15924 P15924 85 94 DSP Desmoplakin yes yes 2 0.0079514 105.98 By MS/MS By MS/MS 3.43 2.87 2 1 2 1 1 4 3 4900600 2464300 2436300 453 628 464 1069;1070;1071;1072;1073;1074;1075 940;941;942;943;944 944 5 503610 634460 AELLDNEKPAAVVAPITTGYTVK ETEIKNKMQQKSQKKAELLDNEKPAAVVAP PAAVVAPITTGYTVKISNYGWDQSDKFVKI K A E V K I 4 0 1 1 0 0 2 1 0 1 2 2 0 0 2 0 3 0 1 3 0 0 23 1 2399.2948 Q9HB71 Q9HB71 52 74 CACYBP Calcyclin-binding protein yes yes 3 7.7042E-05 99.414 By MS/MS 8 0 1 1 1780800 1780800 0 454 2501 465 1076 945 945 1 22483 0 AELLLLK PLSTPMPKKRGRKSKAELLLLKLSKDLDRP KKRGRKSKAELLLLKLSKDLDRPESQSPKR K A E L K L 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 7 0 798.52149 Q8WUA4 Q8WUA4 149 155 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 0.044235 94.006 By MS/MS 4 0 1 1 372980 372980 0 455 2014 466 1077 946 946 1 35100 0 AELLQGGDLLR KANLTCKIAIDNLEKAELLQGGDLLRQRKT NLEKAELLQGGDLLRQRKTTKESLAQTSST K A E L R Q 1 1 0 1 0 1 1 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 11 0 1183.6561 Q12981 Q12981 112 122 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.00015231 147.3 By MS/MS 8 0 1 1 3147100 3147100 0 456 1343 467 1078 947 947 1 39731 0 AELLQLYER DRISPEGLEKMAQLRAELLQLYERCILLDI KMAQLRAELLQLYERCILLDIEFSDNQNVD R A E E R C 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 9 0 1133.6081 Q86US8 Q86US8 617 625 SMG6 Telomerase-binding protein EST1A yes yes 2 0.0011964 131.52 By MS/MS 3 0 1 1 232520 232520 0 457 1824 468 1079 948 948 1 4254.5 0 AELNEFLTR QISKKRKFVADGIFKAELNEFLTRELAEDG ADGIFKAELNEFLTRELAEDGYSGVEVRVT K A E T R E 1 1 1 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1091.5611 P23396 P23396 19 27 RPS3 40S ribosomal protein S3 yes yes 2 0.00025711 159.79 By MS/MS By MS/MS 6.5 3.04 1 1 2 2 1 1 6 2 81734000 81180000 554110 458 703 469 1080;1081;1082;1083;1084;1085;1086;1087 949;950;951;952;953;954;955 949 7 1342000 770180 AELQQLR ______________________________ ______________________________ M A E L R V 1 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 856.47667 Q96C01 Q96C01 2 8 FAM136A Protein FAM136A yes yes 2 0.044027 94.163 By MS/MS 8 0 1 1 2229000 2229000 0 459 2118 470 1088 956 956 1 28141 0 AELRDDPIISTHLAK NRSLADFEKALTDYRAELRDDPIISTHLAK AELRDDPIISTHLAKLYDNLLEQNLIRVIE R A E A K L 2 1 0 2 0 0 1 0 1 2 2 1 0 0 1 1 1 0 0 0 0 0 15 1 1677.905 O00231 O00231 311 325 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 3 0.00035223 161.04 By MS/MS 6.5 0.5 1 1 2 7366200 7366200 0 460 93 471 1089;1090 957 957 1 108810 0 AELTMAALCGR LDASTDEAATENILKAELTMAALCGRLGLV NILKAELTMAALCGRLGLVTSRDAFITAIC K A E G R L 3 1 0 0 1 0 1 1 0 0 2 0 1 0 0 0 1 0 0 0 0 0 11 0 1191.574 Q7Z3U7 Q7Z3U7 584 594 MON2 Protein MON2 homolog yes yes 2 0.00026942 137.05 By MS/MS 2 0 1 1 263750 263750 0 461 1787 472 1091 958 958 1 89213 0 AENFFILR EKILCHKFMRFMMMRAENFFILRRKPVEGY MRFMMMRAENFFILRRKPVEGYDISFLITN R A E L R R 1 1 1 0 0 0 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1008.5393 P59998 P59998 98 105 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 4.3311E-05 178.83 By MS/MS 9.5 0.5 1 1 2 946300 946300 0 462 1088 473 1092;1093 959;960 959 2 24738 0 AENHCELLSPAR ______________________________ ______________________________ M A E A R G 2 1 1 0 1 0 2 0 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1395.6565 Q9NXV2 Q9NXV2 2 13 KCTD5 BTB/POZ domain-containing protein KCTD5 yes yes 2 0.00023168 150.09 By MS/MS 9 0.816 1 1 1 3 2522500 2522500 0 463 2629 474 1094;1095;1096 961;962 961 1 44984 0 AENLSVPVIGALLR PIVLLPCDLPKVVSRAENLSVPVIGALLRF RAENLSVPVIGALLRFNQAILVSRHDPASR R A E L R F 2 1 1 0 0 0 1 1 0 1 3 0 0 0 1 1 0 0 0 2 0 0 14 0 1450.8508 Q643R3 Q643R3 150 163 LPCAT4 Lysophospholipid acyltransferase LPCAT4 yes yes 2 0.00044057 144.7 By MS/MS 6 0 1 1 130660 130660 0 464 1667 475 1097 963 963 1 898.22 0 AENPSLENHR ______________________________ ______________________________ M A E H R I 1 1 2 0 0 0 2 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1165.5476 O00505 O00505 2 11 KPNA3 Importin subunit alpha-4 yes yes 2 0.0089035 99.013 By MS/MS 6 0 1 1 1057100 1057100 0 465 111 476 1098 964 964 1 7267 0 AENQPIRDVLK QLTSSELESTLETLKAENQPIRDVLKQLIL ETLKAENQPIRDVLKQLILVLCSEENMQKA K A E L K Q 1 1 1 1 0 1 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 11 1 1281.7041 P42704 P42704 673 683 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.019653 106.62 By MS/MS 3.5 0.5 1 1 2 3275700 3275700 0 466 886 477 1099;1100 965 965 1 128590 0 AENQVLAMR KLKDELASTKQKLEKAENQVLAMRKQSEGL KQKLEKAENQVLAMRKQSEGLTKEYDRLLE K A E M R K 2 1 1 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 9 0 1030.523 P51572 P51572 205 213 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.0017156 124.92 By MS/MS 8 0 1 1 1025500 1025500 0 467 999 478 1101 966 966 1 12946 0 AENSAALGKPTAGTTDAGEAAK DKHASEKHAAAAGGKAENSAALGKPTAGTT GKPTAGTTDAGEAAKILAEKRRQARLQKEQ K A E A K I 7 0 1 1 0 0 2 3 0 0 1 2 0 0 1 1 3 0 0 0 0 0 22 1 2029.9916 Q96T17 Q96T17 381 402 MAP7D2 MAP7 domain-containing protein 2 yes yes 3 5.4508E-06 125.75 By MS/MS 4 0 1 1 599670 599670 0 468 2237 479 1102 967 967 1 56433 0 AENSESLGTVPEHER ______________________________ AENSESLGTVPEHERILQEIESTDTACVGP M A E E R I 1 1 1 0 0 0 4 1 1 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1653.7594 Q8TAG9 Q8TAG9 2 16 EXOC6 Exocyst complex component 6 yes yes 2 0.0085981 119.17 By MS/MS 4 0 1 1 1016700 1016700 0 469 1975 480 1103 968 968 1 95679 0 AENSSLNLIGK EVGLVVGNSQVAFEKAENSSLNLIGKAKTK AFEKAENSSLNLIGKAKTKENRQSIINPDW K A E G K A 1 0 2 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 0 1144.6088 P46459 P46459 188 198 NSF Vesicle-fusing ATPase yes yes 2 1.9144E-05 164.66 By MS/MS By matching 5 0 2 1 1 5248600 5142700 105930 470 912 481 1104;1105 969 969 1 51578 88957 AEPAAPPAAPSTPAPPPAVPK KRLDEKFGAPDKRLKAEPAAPPAAPSTPAP PAAPSTPAPPPAVPKELPAPPAPPPASAPT K A E P K E 7 0 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1 0 0 1 0 0 21 0 1933.0309 P48634 P48634 506 526 PRRC2A Protein PRRC2A yes yes 2 0.00067204 101.53 By MS/MS 2.5 0.5 1 1 2 691990 691990 0 471 938 482 1106;1107 970 970 1 187000 0 AEPASVAAESLAGSR ______________________________ AEPASVAAESLAGSRARAARTVLGQVVLPG M A E S R A 5 1 0 0 0 0 2 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 15 0 1414.7052 Q9NQT5 Q9NQT5 2 16 EXOSC3 Exosome complex component RRP40 yes yes 2 1.3225E-23 312.95 By MS/MS 9 0.816 1 1 1 3 7199600 7199600 0 472 2540 483 1108;1109;1110 971;972 971 2 96453 0 AEPSQAPTPAPAAQPR ______________________________ EPSQAPTPAPAAQPRPLQSPAPAPTPTPAP M A E P R P 5 1 0 0 0 2 1 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 16 0 1587.8005 Q92830 Q92830 2 17 KAT2A Histone acetyltransferase KAT2A yes yes 2 0.0061072 105.65 By MS/MS 4 0 1 1 454100 454100 0 473 2072 484 1111 973 973 1 42734 0 AEPTVCSFLTK ______________________________ ______________________________ M A E T K V 1 0 0 0 1 0 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 11 0 1251.6169 Q96H79 Q96H79 2 12 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 2 0.00022135 143.4 By MS/MS 6.14 2.23 1 1 1 1 1 1 1 7 8862900 8862900 0 474 2163 485 1112;1113;1114;1115;1116;1117;1118 974;975;976 975 3 573930 0 AEPVEVVAPR LFLAHILSPWGAEVKAEPVEVVAPRGKSGA GAEVKAEPVEVVAPRGKSGAALSKKSKGQV K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00029974 140.35 By MS/MS 2.5 1.12 1 1 1 1 4 6291000 6291000 0 475 543 486 1119;1120;1121;1122 977 977 1 257480 0 AEQEEEFISNTLFK ENRDLRKASVTIQARAEQEEEFISNTLFKK RAEQEEEFISNTLFKKIQALQKEKETLAVN R A E F K K 1 0 1 0 0 1 4 0 0 1 1 1 0 2 0 1 1 0 0 0 0 0 14 0 1683.7992 Q16204 Q16204 105 118 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 1.1889E-33 313.52 By MS/MS 5 0 1 1 637480 637480 0 476 1544 487 1123 978 978 1 6393.6 0 AEQINQAAGEASAVLAK EGKKQAQILASEAEKAEQINQAAGEASAVL QINQAAGEASAVLAKAKAKAEAIRILAAAL K A E A K A 6 0 1 0 0 2 2 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 17 0 1669.8635 Q9UJZ1 Q9UJZ1 234 250 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2;3 3.517E-71 361.58 By MS/MS 7.33 0.471 2 1 3 14061000 14061000 0 477 2755 488 1124;1125;1126 979;980 979 2 218530 0 AEQIVPLSAASFER KRDITAFYDSLKLVRAEQIVPLSAASFERG RAEQIVPLSAASFERGSYQRGYEYIVRLHM R A E E R G 3 1 0 0 0 1 2 0 0 1 1 0 0 1 1 2 0 0 0 1 0 0 14 0 1516.7886 Q13535 Q13535 1828 1841 ATR Serine/threonine-protein kinase ATR yes yes 2 0.016799 94.09 By MS/MS 2 0 1 1 196810 196810 0 478 1395 489 1127 981 981 1 66569 0 AEQSLHDLQER EHMKKMMKDLEGLHRAEQSLHDLQERLHKA GLHRAEQSLHDLQERLHKAQEEHRTVEVEK R A E E R L 1 1 0 1 0 2 2 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1324.6371 Q13586 Q13586 254 264 STIM1 Stromal interaction molecule 1 yes yes 2;3 0.0023803 110.84 By MS/MS 4.5 0.5 2 2 4 2601700 2601700 0 479 1400 490 1128;1129;1130;1131 982;983;984 984 3 132950 0 AERENADIIR NEMLRVETEARARAKAERENADIIREQIRL RARAKAERENADIIREQIRLKASEHRQTVL K A E I R E 2 2 1 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 10 1 1185.6102 Q9NVI7;Q5T9A4 Q5T9A4 199 208 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2;3 8.6454E-05 180.67 By MS/MS 5 0 2 2 3747900 3747900 0 480 2598;1638 491 1132;1133 985;986 986 2 37589 0 AERENADIIREQIR NEMLRVETEARARAKAERENADIIREQIRL KAERENADIIREQIRLKASEHRQTVLESIR K A E I R L 2 3 1 1 0 1 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 14 2 1711.8965 Q9NVI7;Q5T9A4 Q5T9A4 199 212 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 4 0.019536 107.97 By MS/MS 5 0 1 1 1790900 1790900 0 481 2598;1638 492 1134 987 987 1 17962 0 AERPEDLNLPNAVITR ______________________________ ERPEDLNLPNAVITRIIKEALPDGVNISKE M A E T R I 2 2 2 1 0 0 2 0 0 1 2 0 0 0 2 0 1 0 0 1 0 0 16 1 1806.9588 Q9NRF9 Q9NRF9 2 17 POLE3 DNA polymerase epsilon subunit 3 yes yes 2 0.0004374 148.18 By MS/MS 9 0 1 1 874200 874200 0 482 2550 493 1135 988;989 988 2 17204 0 AERQEEQR ______________________________ ______________________________ M A E Q R G 1 2 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1044.4948 Q8TB36 Q8TB36 2 9 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes yes 2 0.036546 87.181 By MS/MS 7 0 1 1 587780 587780 0 483 1979 494 1136 990 990 1 9227.1 0 AESAPLPVSADDTPEVLNR EAKVDGETASDSESRAESAPLPVSADDTPE PLPVSADDTPEVLNRALSNLSSRWKNWWVR R A E N R A 3 1 1 2 0 0 2 0 0 0 2 0 0 0 3 2 1 0 0 2 0 0 19 0 1979.98 O95674 O95674 39 57 CDS2 Phosphatidate cytidylyltransferase 2 yes yes 2 0.00016383 155.43 By MS/MS 1.5 0.5 1 1 2 464860 464860 0 484 421 495 1137;1138 991 991 1 127680 0 AESGPDLRYEVTSGGGGTSR GGSHPRINTLGRMIRAESGPDLRYEVTSGG DLRYEVTSGGGGTSRMYYSRRGVITDQNSD R A E S R M 1 2 0 1 0 0 2 5 0 0 1 0 0 0 1 3 2 0 1 1 0 0 20 1 1994.9294 P15924 P15924 20 39 DSP Desmoplakin yes yes 2;3 2.2305E-11 164.2 By MS/MS 2.25 0.829 1 1 2 4 2427400 0 2427400 485 628 496 1139;1140;1141;1142 992;993;994;995 994 3 0 604700 AESLIGVYPEQGDCVISK FQAIVISLKEEFYTKAESLIGVYPEQGDCV LIGVYPEQGDCVISKVLTFDLTKYPDANPN K A E S K V 1 0 0 1 1 1 2 2 0 2 1 1 0 0 1 2 0 0 1 2 0 0 18 0 1963.9561 Q14683 Q14683 1197 1214 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00028268 150.12 By MS/MS 3 0 1 1 286340 286340 0 486 1451 497 1143 996;997 996 2 5239.2 0 AESLQQEVEALK AIEMATLDKEMAEERAESLQQEVEALKERV EERAESLQQEVEALKERVDELTTDLEILKA R A E L K E 2 0 0 0 0 2 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1343.6933 Q14203 Q14203 318 329 DCTN1 Dynactin subunit 1 yes yes 2 0.00040977 136.81 By MS/MS 3 0 1 1 147730 147730 0 487 1432 498 1144 998 998 1 2703 0 AESLQVTR RHIKASTKVEVDMEKAESLQVTRGDFLASL VEVDMEKAESLQVTRGDFLASLENDIKPAF K A E T R G 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 902.48214 P46459 P46459 470 477 NSF Vesicle-fusing ATPase yes yes 2 0.015085 105.1 By MS/MS By matching 5 0 2 1 1 1943900 1910200 33658 488 912 499 1145;1146 999 999 1 19159 28265 AESSDKLYR ______________________________ ______________________________ M A E Y R V 1 1 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 9 1 1067.5247 P09874 P09874 2 10 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0005343 145.16 By MS/MS 5.83 2.27 1 1 1 1 1 1 6 10466000 10466000 0 489 543 500 1147;1148;1149;1150;1151;1152 1000;1001;1002 1002 3 689910 0 AESSDKLYRVEYAK ______________________________ MAESSDKLYRVEYAKSGRASCKKCSESIPK M A E A K S 2 1 0 1 0 0 2 0 0 0 1 2 0 0 0 2 0 0 2 1 0 0 14 2 1657.8312 P09874 P09874 2 15 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.00038966 171.62 By MS/MS 4 0.816 1 1 1 3 4626100 4626100 0 490 543 501 1153;1154;1155 1003;1004;1005 1004 3 244310 0 AESTPEIAEQR VYLQNWSHVLSYVSKAESTPEIAEQRGERD YVSKAESTPEIAEQRGERDSQTQAILTKLK K A E Q R G 2 1 0 0 0 1 3 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 11 0 1229.5888 Q13098 Q13098 225 235 GPS1 COP9 signalosome complex subunit 1 yes yes 2 0.0012912 115.78 By MS/MS 6 0.816 1 1 1 3 1779500 1779500 0 491 1352 502 1156;1157;1158 1006 1006 1 14001 0 AETECQNTEYQQLLDIK QAQISALEEQLQQIRAETECQNTEYQQLLD TECQNTEYQQLLDIKIRLENEIQTYRSLLE R A E I K I 1 0 1 1 1 3 3 0 0 1 2 1 0 0 0 0 2 0 1 0 0 0 17 0 2081.9575 CON__P13645;P13645 CON__P13645 423 439 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 8.3675E-120 406.58 By MS/MS By MS/MS 5.35 2.33 1 1 3 3 2 4 2 2 1 1 10 10 61091000 46761000 14331000 + 492 50 503 1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169;1170;1171;1172;1173;1174;1175;1176;1177;1178 1007;1008;1009;1010;1011;1012;1013;1014;1015;1016;1017;1018;1019;1020;1021;1022;1023;1024;1025;1026 1015 20 1914700 8474300 AETLEFNDVYQEVK ______________________________ MAETLEFNDVYQEVKGSMNDGRLRLSRQGI M A E V K G 1 0 1 1 0 1 3 0 0 0 1 1 0 1 0 0 1 0 1 2 0 0 14 0 1683.7992 Q08945 Q08945 2 15 SSRP1 FACT complex subunit SSRP1 yes yes 2 1.0872E-17 285.83 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 2601900 2601900 0 493 1313 504 1179;1180;1181;1182;1183;1184 1027;1028 1027 2 91618 0 AETVADTRR ______________________________ ______________________________ M A E R R L 2 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 9 1 1017.5203 O60493 O60493 2 10 SNX3 Sorting nexin-3 yes yes 2 0.0029419 118.74 By MS/MS 9.5 0.5 1 1 2 2094300 2094300 0 494 258 505 1185;1186 1029;1030 1029 2 64755 0 AEVASAVCLR VVTSGLTYIKIQLVKAEVASAVCLRLHRPR IQLVKAEVASAVCLRLHRPRDASTLGLSQI K A E L R L 3 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1074.5492 Q9NR09 Q9NR09 3272 3281 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 1.2271E-10 214.23 By MS/MS 1 0 1 1 359530 359530 0 495 2543 506 1187 1031 1031 1 86634 0 AEVDPGPEQFLSK A E S K 1 0 0 1 0 1 2 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 13 0 1415.6933 REV__Q6ZN54 yes yes 2 0.010589 90.827 By MS/MS 9 0 1 1 2982100 2982100 0 + 496 2971 507 1188 1032 1032 1 58687 0 AEVEETLKR ______________________________ ______________________________ M A E K R L 1 1 0 0 0 0 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 1073.5717 Q9NP97;Q8TF09 Q9NP97 2 10 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 2 0.00023088 156.75 By MS/MS By MS/MS 10 0 2 1 1 8134500 8067800 66636 497 2007 508 1189;1190 1033;1034 1034 2 434830 85312 AEVEQKK ______________________________ ______________________________ M A E K K K 1 0 0 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 7 1 830.44978 P62841 P62841 2 8 RPS15 40S ribosomal protein S15 yes yes 2 0.01012 163.34 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 40965000 40798000 167110 498 1174 509 1191;1192;1193 1035;1036 1036 2 973370 381050 AEVEVADELLENLAK SAADLSMLVLESLEKAEVEVADELLENLAK AEVEVADELLENLAKVFSLMDPNSPERVTF K A E A K V 3 0 1 1 0 0 4 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1641.8461 Q7L5D6 Q7L5D6 96 110 GET4 Golgi to ER traffic protein 4 homolog yes yes 2 0.00026037 174.05 By MS/MS 8 0 1 1 75654 75654 0 499 1765 510 1194 1037;1038 1038 2 955.12 0 AEVGEKTEER FSDIPRRAPKKPLTRAEVGEKTEERRVERD KPLTRAEVGEKTEERRVERDILKEMFPYEA R A E E R R 1 1 0 0 0 0 4 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 10 1 1146.5517 P42167 P42167 329 338 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.017424 104.42 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 13471000 11429000 2041800 500 876 511 1195;1196;1197;1198;1199;1200 1039 1039 1 155400 2092200 AEVLQSTQR QAALKAEQDMKAKQRAEVLQSTQRFFSEQQ MKAKQRAEVLQSTQRFFSEQQQSKQIGGGK R A E Q R F 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1030.5407 Q9Y520 Q9Y520 2815 2823 PRRC2C Protein PRRC2C yes yes 2 0.00020247 155.84 By MS/MS By matching 3.29 2.05 2 1 1 1 1 1 6 1 3981300 3966300 14958 501 2905 512 1201;1202;1203;1204;1205;1206;1207 1040;1041 1040 2 386650 14958 AEVLSEEPILK HFMKAFQKIVVLFYKAEVLSEEPILKWYKD LFYKAEVLSEEPILKWYKDAHVAKGKSVFL K A E L K W 1 0 0 0 0 0 3 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1226.6758 Q7L1Q6 Q7L1Q6 369 379 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 3.6792E-06 179.1 By MS/MS 7 0 1 1 4677900 4677900 0 502 1760 513 1208 1042 1042 1 73435 0 AEVLWLMGAK SLEALLQRAVAHCPKAEVLWLMGAKSKWLA AHCPKAEVLWLMGAKSKWLAGDVPAARSIL K A E A K S 2 0 0 0 0 0 1 1 0 0 2 1 1 0 0 0 0 1 0 1 0 0 10 0 1116.6002 O94906 O94906 607 616 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0085324 97.635 By MS/MS 4 0 1 1 113850 113850 0 503 376 514 1209 1043 1043 1 10714 0 AEVQKLQMEAPHIIVGTPGR MGASCHACIGGTNVRAEVQKLQMEAPHIIV LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI R A E G R V 2 1 0 0 0 2 2 2 1 2 1 1 1 0 2 0 1 0 0 2 0 0 20 1 2173.1678 P60842 P60842 142 161 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 1.0214E-07 232.01 By MS/MS 6.86 1.06 1 5 4 3 1 14 186780000 186780000 0 504 1097 515;516 1210;1211;1212;1213;1214;1215;1216;1217;1218;1219;1220;1221;1222;1223 1044;1045;1046;1047;1048;1049;1050;1051 1051 620 8 1352100 0 AEVQVLVLDGR ______________________________ ______________________________ M A E G R G 1 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 3 0 0 11 0 1197.6717 P40429 P40429 2 12 RPL13A 60S ribosomal protein L13a yes yes 2 0.0002779 138.99 By MS/MS 8.33 0.471 2 1 3 1256000 1256000 0 505 859 517 1224;1225;1226 1052;1053;1054 1054 2 17038 0 AEVVSLLLDR TNRNTALTLACFQGRAEVVSLLLDRKANVE CFQGRAEVVSLLLDRKANVEHRAKTGLTPL R A E D R K 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 10 0 1113.6394 Q8IWZ3 Q8IWZ3 1237 1246 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.00026923 142.43 By MS/MS 2 0.816 1 1 1 3 430450 430450 0 506 1872 518 1227;1228;1229 1055;1056;1057 1056 3 126770 0 AEWQVYKEEISR ELPDSKKKIYQDAYRAEWQVYKEEISRFKE AYRAEWQVYKEEISRFKEQLTPSQIMSLEK R A E S R F 1 1 0 0 0 1 3 0 0 1 0 1 0 0 0 1 0 1 1 1 0 0 12 1 1536.7573 Q00059 Q00059 105 116 TFAM Transcription factor A, mitochondrial yes yes 2;3 0.00065958 124.38 By MS/MS 8.5 0.5 2 2 4 3996800 3996800 0 507 1258 519 1230;1231;1232;1233 1058;1059;1060 1059 3 58892 0 AEYDLTTR ______________________________ ______________________________ M A E T R I 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 8 0 967.46108 P60228 P60228 2 9 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 5.4747E-05 149.65 By MS/MS 7 0.816 1 1 1 3 0 0 0 508 1090 520 1234;1235;1236 1061;1062;1063 1061 3 0 0 AEYEGDGIPTVFVAVAGR VTSAHKGPDETLRIKAEYEGDGIPTVFVAV EGDGIPTVFVAVAGRSNGLGPVMSGNTAYP K A E G R S 3 1 0 1 0 0 2 3 0 1 0 0 0 1 1 0 1 0 1 3 0 0 18 0 1849.921 P22234 P22234 314 331 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.00017489 163.71 By MS/MS 7 0 1 1 116630 116630 0 509 689 521 1237 1064 1064 1 1830.9 0 AEYLASIFGTEK ______________________________ ______________________________ M A E E K D 2 0 0 0 0 0 2 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 12 0 1327.666 P0DN76;Q01081;Q8WU68 P0DN76 2 13 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 0.00045802 136.96 By MS/MS 7.5 0.5 1 1 2 66889 66889 0 510 551 522 1238;1239 1065 1065 1 953.94 0 AFADLLVER HHDEALAVAERGRTRAFADLLVERQTGQQD ERGRTRAFADLLVERQTGQQDSDPYSPVTI R A F E R Q 2 1 0 1 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1032.5604 Q96AY4 Q96AY4 1199 1207 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.00048442 147.19 By MS/MS 2.5 0.5 1 1 2 359060 359060 0 511 2110 523 1240;1241 1066 1066 1 93634 0 AFAETHIK LLMSEDYFTQAMEVKAFAETHIKGFTLNDA TQAMEVKAFAETHIKGFTLNDAANSRLIIT K A F I K G 2 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 8 0 915.48142 P42704 P42704 1091 1098 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.001555 147.52 By MS/MS By matching 4.2 1.17 2 1 1 1 4 1 19604000 19345000 258930 512 886 524 1242;1243;1244;1245;1246 1067;1068 1067 2 498280 32958 AFAGPLSPAK SRYGGSPRDPVLTLRAFAGPLSPAKAEDFR VLTLRAFAGPLSPAKAEDFRKLWKTPPREK R A F A K A 3 0 0 0 0 0 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 0 10 0 957.52837 Q86XL3 Q86XL3 522 531 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.039672 77.318 By MS/MS 4 0 1 1 1045900 1045900 0 513 1845 525 1247 1069 1069 1 98427 0 AFALEVIK KPENQFAFNGEFKNKAFALEVIKSTHQCWK NGEFKNKAFALEVIKSTHQCWKALLMKKCN K A F I K S 2 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 889.5273 Q9H2U2 Q9H2U2 262 269 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 2 0.018484 101.33 By MS/MS 8 0 1 1 516560 516560 0 514 2433 526 1248 1070 1070 1 6521.5 0 AFANLRK ______________________________ ______________________________ M A F R K V 2 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 1 818.47627 O43175 O43175 2 8 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.02406 114.6 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 32465000 32180000 284650 515 195 527 1249;1250;1251;1252;1253;1254 1071;1072;1073 1071 2 289830 291690 AFATAFLSSEPR VIFMALDLASLASVRAFATAFLSSEPRLDI SVRAFATAFLSSEPRLDILIHNAGISSCGR R A F P R L 3 1 0 0 0 0 1 0 0 0 1 0 0 2 1 2 1 0 0 0 0 0 12 0 1295.651 Q6UX07 Q6UX07 104 115 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 3.1528E-05 173.24 By MS/MS 7 0 1 1 626840 626840 0 516 1733 528 1255 1074 1074 1 9840.3 0 AFAVGVQQVLLK NVSKEYNEFAEVFLKAFAVGVQQVLLKVLY FLKAFAVGVQQVLLKVLYQYKEKQYMAPRV K A F L K V 2 0 0 0 0 2 0 1 0 0 2 1 0 1 0 0 0 0 0 3 0 0 12 0 1271.7602 O95373 O95373 295 306 IPO7 Importin-7 yes yes 2 1.3313E-05 178.94 By MS/MS 3.5 0.5 1 1 2 593010 593010 0 517 406 529 1256;1257 1075;1076 1076 2 51456 0 AFCAGGDIR DPETFLIIIKGAGGKAFCAGGDIRVISEAE KGAGGKAFCAGGDIRVISEAEKAKQKIAPV K A F I R V 2 1 0 1 1 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 9 0 965.4389 Q6NVY1 Q6NVY1 93 101 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 0.0081244 103.74 By MS/MS 7 0 1 1 820490 820490 0 518 1691 530 1258 1077;1078 1077 2 12880 0 AFDIIER LITFFDEYHSGHIDRAFDIIERLKLVPLNQ YHSGHIDRAFDIIERLKLVPLNQESVEERV R A F E R L 1 1 0 1 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 862.45487 Q8N1F7 Q8N1F7 710 716 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.039197 97.798 By MS/MS 4 0 1 1 1179400 1179400 0 519 1903 531 1259 1079 1079 1 110990 0 AFDLFNPNFK RIRAKFYSVYGSGQRAFDLFNPNFKSTCQR GSGQRAFDLFNPNFKSTCQRFVEKYTELQK R A F F K S 1 0 2 1 0 0 0 0 0 0 1 1 0 3 1 0 0 0 0 0 0 0 10 0 1211.5975 Q9Y3D9 Q9Y3D9 84 93 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.0012649 118.5 By MS/MS 8.67 0.471 1 2 3 6282400 6282400 0 520 2875 532 1260;1261;1262 1080;1081;1082 1082 3 123260 0 AFDLIVDR RRTPVQPNPIVYMMKAFDLIVDRPVTLVRE PIVYMMKAFDLIVDRPVTLVREFIERQHAK K A F D R P 1 1 0 2 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 947.50763 O96000 O96000 30 37 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.033017 88.948 By MS/MS 9 0 1 1 189070 189070 0 521 436 533 1263 1083 1083 1 3720.9 0 AFDLIVDRPVTLVR RRTPVQPNPIVYMMKAFDLIVDRPVTLVRE KAFDLIVDRPVTLVREFIERQHAKNRYYYY K A F V R E 1 2 0 2 0 0 0 0 0 1 2 0 0 1 1 0 1 0 0 3 0 0 14 1 1612.9301 O96000 O96000 30 43 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.0064055 90.614 By MS/MS 9 0 1 1 234520 234520 0 522 436 534 1264 1084 1084 1 4615.4 0 AFDSGIIPMEFVNK RFGGALDAAAKMFSKAFDSGIIPMEFVNKM KAFDSGIIPMEFVNKMKKEGKLIMGIGHRV K A F N K M 1 0 1 1 0 0 1 1 0 2 0 1 1 2 1 1 0 0 0 1 0 0 14 0 1566.7752 P53396 P53396 949 962 ACLY ATP-citrate synthase yes yes 2 0.00021371 174.42 By MS/MS 4.33 0.471 2 1 3 3393100 3393100 0 523 1030 535;536 1265;1266;1267 1085;1086 1085 564 2 304420 0 AFDTAGNGYCR QFLRLGMLSPEGTCKAFDTAGNGYCRSEGV GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA K A F C R S 2 1 1 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 11 0 1230.5088 P49327 P49327 214 224 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.779E-09 214.05 By MS/MS 4 1.41 1 1 1 1 1 5 4063000 4063000 0 524 946 537 1268;1269;1270;1271;1272 1087;1088;1089 1089 3 535210 0 AFESDVFHNR EALDPPMRLPRRPLRAFESDVFHNRTTNQR RRPLRAFESDVFHNRTTNQRNITAQVSIQN R A F N R T 1 1 1 1 0 0 1 0 1 0 0 0 0 2 0 1 0 0 0 1 0 0 10 0 1220.5574 O14545 O14545 188 197 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 0.011095 91.867 By MS/MS 5 0 1 1 1473100 1473100 0 525 125 538 1273 1090 1090 1 14775 0 AFFALVTNGVR SSKLVVFDTSLQVKKAFFALVTNGVRAAPL QVKKAFFALVTNGVRAAPLWDSKKQSFVGM K A F V R A 2 1 1 0 0 0 0 1 0 0 1 0 0 2 0 0 1 0 0 2 0 0 11 0 1193.6557 P54619 P54619 60 70 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 0.01617 92.439 By MS/MS 7 0 1 1 111860 111860 0 526 1044 539 1274 1091 1091 0 1756 0 AFFPCFDTPAVK KKPFVYTQGQAVLNRAFFPCFDTPAVKYKY LNRAFFPCFDTPAVKYKYSALIEVPDGFTA R A F V K Y 2 0 0 1 1 0 0 0 0 0 0 1 0 3 2 0 1 0 0 1 0 0 12 0 1398.6642 Q9H4A4 Q9H4A4 177 188 RNPEP Aminopeptidase B yes yes 2 0.013533 88.681 By MS/MS 5 0 1 1 478460 478460 0 527 2444 540 1275 1092 1092 1 4798.7 0 AFGPGLQGGSAGSPAR FPLEAVAPTKPSKVKAFGPGLQGGSAGSPA FGPGLQGGSAGSPARFTIDTKGAGTGGLGL K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 P21333 P21333 1072 1087 FLNA Filamin-A yes yes 2 6.6805E-07 206.74 By MS/MS By MS/MS 2.17 1.07 2 2 1 1 4 2 9006400 8763400 243060 528 677 541 1276;1277;1278;1279;1280;1281 1093;1094;1095;1096 1094 4 2066500 298020 AFGSTIVINPEK GGVQVLLQQWIEYIKAFGSTIVINPEKDKT YIKAFGSTIVINPEKDKTMVQELLDFKDKV K A F E K D 1 0 1 0 0 0 1 1 0 2 0 1 0 1 1 1 1 0 0 1 0 0 12 0 1274.6871 Q13620 Q13620 500 511 CUL4B Cullin-4B yes yes 2 0.021279 96.103 By MS/MS 4 0 1 1 852230 852230 0 529 1405 542 1282 1097;1098 1097 2 80200 0 AFGYYGPLR VGNLGNNGNKTELERAFGYYGPLRSVWVAR KTELERAFGYYGPLRSVWVARNPPGFAFVE R A F L R S 1 1 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 2 0 0 0 9 0 1042.5236 P84103 P84103 29 37 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 2 0.00078107 138.07 By MS/MS 8 0.816 1 1 1 3 2268300 2268300 0 530 1248 543 1283;1284;1285 1099 1099 1 41130 0 AFHNEAQVNPER VNAAQDSTDLVAKLRAFHNEAQVNPERKNL KLRAFHNEAQVNPERKNLKWIGLDLSNGKP R A F E R K 2 1 2 0 0 1 2 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 12 0 1410.664 P17987 P17987 469 480 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 1.7705E-05 177.57 By MS/MS By matching 5.57 2.82 2 2 4 3 1 1 1 12 2 38501000 38360000 140990 531 648 544 1286;1287;1288;1289;1290;1291;1292;1293;1294;1295;1296;1297;1298;1299 1100;1101;1102;1103;1104 1103 5 605690 144470 AFHNEAQVNPERK VNAAQDSTDLVAKLRAFHNEAQVNPERKNL LRAFHNEAQVNPERKNLKWIGLDLSNGKPR R A F R K N 2 1 2 0 0 1 2 0 1 0 0 1 0 1 1 0 0 0 0 1 0 0 13 1 1538.759 P17987 P17987 469 481 TCP1 T-complex protein 1 subunit alpha yes yes 2;3;4 4.2493E-11 237.76 By MS/MS 5.92 1.61 1 1 3 3 2 1 1 12 100250000 100250000 0 532 648 545 1300;1301;1302;1303;1304;1305;1306;1307;1308;1309;1310;1311 1105;1106;1107;1108;1109;1110 1108 6 801930 0 AFIGFEGVK VIDQDMATRLKPAQKAFIGFEGVKGKKKMS LKPAQKAFIGFEGVKGKKKMSAAEAVKEKW K A F V K G 1 0 0 0 0 0 1 2 0 1 0 1 0 2 0 0 0 0 0 1 0 0 9 0 966.51747 P15924 P15924 2694 2702 DSP Desmoplakin yes yes 2 0.048772 76.478 By MS/MS 2 0.816 1 1 1 3 785730 785730 0 533 628 546 1312;1313;1314 1111 1111 1 223680 0 AFITNIPFDVK GNRFEPYANPTKRYRAFITNIPFDVKWQSL KRYRAFITNIPFDVKWQSLKDLVKEKVGEV R A F V K W 1 0 1 1 0 0 0 0 0 2 0 1 0 2 1 0 1 0 0 1 0 0 11 0 1263.6863 P52272 P52272 73 83 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 1.3435E-05 169.99 By MS/MS 5 0 1 1 2334800 2334800 0 534 1012 547 1315 1112 1112 1 23416 0 AFKDKVDVASVIVTK VMDASIGQACEAQAKAFKDKVDVASVIVTK AFKDKVDVASVIVTKLDGHAKGGGALSAVA K A F T K L 2 0 0 2 0 0 0 0 0 1 0 3 0 1 0 1 1 0 0 4 0 0 15 2 1618.9294 P61011 P61011 235 249 SRP54 Signal recognition particle 54 kDa protein yes yes 3 0.036118 69.331 By MS/MS 6.5 0.5 1 1 2 4714200 4714200 0 535 1104 548 1316;1317 1113 1113 0 34245 0 AFKDTGK ______________________________ ______________________________ M A F G K T 1 0 0 1 0 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 7 1 765.4021 P60866 P60866 2 8 RPS20 40S ribosomal protein S20 yes yes 2 0.0026647 166.78 By MS/MS By matching 10 0 3 2 1 12767000 12476000 290250 536 1098 549 1318;1319;1320 1114;1115 1115 2 672430 371600 AFKDTGKTPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK M A F H R I 2 1 0 1 0 0 2 1 1 1 0 2 0 1 2 0 2 0 0 2 0 0 18 2 1994.0585 P60866 P60866 2 19 RPS20 40S ribosomal protein S20 yes yes 3;4 0.00044385 109.67 By MS/MS 10 0 3 3 55305000 55305000 0 537 1098 550 1321;1322;1323 1116;1117;1118 1117 2 2980700 0 AFKELPVNAQNYVR YKTLPGWNTDISNARAFKELPVNAQNYVRF RAFKELPVNAQNYVRFIEDELQIPVKWIGV R A F V R F 2 1 2 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 2 0 0 14 1 1647.8733 P30520 P30520 417 430 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 3 0.015673 81.565 By MS/MS 6.5 0.5 1 1 2 2131400 2131400 0 538 774 551 1324;1325 1119 1119 1 26291 0 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK SVETDYTFPLAEKVKAFLADPSAFVAAAPV AATTAAPAAAAAPAKVEAKEESEESDEDMG K A F A K V 17 0 0 1 0 0 0 0 0 0 1 1 0 2 4 1 2 0 0 2 0 0 31 0 2751.4596 P05388 P05388 267 297 RPLP0 60S acidic ribosomal protein P0 yes yes 3 0.016307 54.717 By MS/MS 7 0 1 1 312800 312800 0 539 491 552 1326 1120 1120 1 4910.3 0 AFLASGPYLTHQQK ______________________________ MAFLASGPYLTHQQKVLRLYKRALRHLESW M A F Q K V 2 0 0 0 0 2 0 1 1 0 2 1 0 1 1 1 1 0 1 0 0 0 14 0 1559.8096 Q9Y6M9 Q9Y6M9 2 15 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2 2.1874E-16 249.83 By MS/MS 9.5 0.5 1 1 2 3421700 3421700 0 540 2948 553 1327;1328 1121;1122;1123 1121 3 70590 0 AFLDALQNQAEASSK ELVSNLGTIARSGSKAFLDALQNQAEASSK AFLDALQNQAEASSKIIGQFGVGFYSAFMV K A F S K I 4 0 1 1 0 2 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 15 0 1591.7842 Q12931 Q12931 182 196 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 3.0434E-33 310.34 By MS/MS 7.25 1.48 1 1 1 1 4 16790000 16790000 0 541 1340 554 1329;1330;1331;1332 1124;1125;1126 1125 3 173710 0 AFLDEDDMSLEEIKNR RDKATTSGSNSISVRAFLDEDDMSLEEIKN FLDEDDMSLEEIKNRQNAARNNSPPTVGAF R A F N R Q 1 1 1 3 0 0 3 0 0 1 2 1 1 1 0 1 0 0 0 0 0 0 16 1 1923.8884 Q86XL3 Q86XL3 639 654 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.043726 65.495 By MS/MS 4.5 0.5 1 1 2 1576600 1576600 0 542 1845 555 1333;1334 1127 1127 952 1 81515 0 AFLDSLPDVK HIYDNRIVLNGIDLKAFLDSLPDVKIVKMK GIDLKAFLDSLPDVKIVKMKCPDGGDNADS K A F V K I 1 0 0 2 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 10 0 1103.5863 O15294 O15294 743 752 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.00030328 140.11 By MS/MS 4 0 1 1 982160 982160 0 543 179 556 1335 1128 1128 1 92428 0 AFLEENNLDYIIR SKRGVSCQFGPDVTKAFLEENNLDYIIRSH TKAFLEENNLDYIIRSHEVKAEGYEVAHGG K A F I R S 1 1 2 1 0 0 2 0 0 2 2 0 0 1 0 0 0 0 1 0 0 0 13 0 1608.8148 P53041 P53041 413 425 PPP5C Serine/threonine-protein phosphatase 5 yes yes 2 2.1906E-11 229.68 By MS/MS 6 0 1 1 1468600 1468600 0 544 1027 557 1336 1129 1129 1 10096 0 AFLFDVVSK ENLLNIFISNSGIEKAFLFDVVSKIYIATD NSGIEKAFLFDVVSKIYIATDSSPVDMQSY K A F S K I 1 0 0 1 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 0 0 9 0 1024.5593 Q9HB90;Q9NQL2 Q9HB90 259 267 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 2 0.010366 99.802 By MS/MS 6.5 0.5 1 1 2 531380 531380 0 545 2502 558 1337;1338 1130;1131 1130 2 5341.3 0 AFLIEEQK GGSMCAKCVRDRIKRAFLIEEQKIVVKVLK VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA R A F Q K I 1 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 976.52295 P49207 P49207 94 101 RPL34 60S ribosomal protein L34 yes yes 2 0.0041431 129.47 By MS/MS By MS/MS 9.5 0.5 2 2 2 2 8616700 8505500 111200 546 945 559 1339;1340;1341;1342 1132;1133;1134 1134 3 368010 178610 AFLIEEQKIVVK GGSMCAKCVRDRIKRAFLIEEQKIVVKVLK IKRAFLIEEQKIVVKVLKAQAQSQKAK___ R A F V K V 1 0 0 0 0 1 2 0 0 2 1 2 0 1 0 0 0 0 0 2 0 0 12 1 1415.8388 P49207 P49207 94 105 RPL34 60S ribosomal protein L34 yes yes 2 0.0020842 136.02 By MS/MS 9.5 0.5 1 1 2 392170 392170 0 547 945 560 1343;1344 1135;1136 1135 2 17979 0 AFLNAIMR GGNIEVLGFNARQRKAFLNAIMRYGMPPQD FNARQRKAFLNAIMRYGMPPQDAFTTQWLV K A F M R Y 2 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 8 0 934.50586 Q14839;Q8TDI0 Q14839 1423 1430 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 0.0062602 118.69 By MS/MS 2 0 1 1 316150 316150 0 548 1459 561 1345 1137 1137 852 1 106930 0 AFLTLAEDILR RFFETSAKANINIEKAFLTLAEDILRKTPV NIEKAFLTLAEDILRKTPVKEPNSENVDIS K A F L R K 2 1 0 1 0 0 1 0 0 1 3 0 0 1 0 0 1 0 0 0 0 0 11 0 1260.7078 P61026 P61026 162 172 RAB10 Ras-related protein Rab-10 yes yes 2 3.242E-06 179.51 By MS/MS 9 0 1 1 71204 71204 0 549 1106 562 1346 1138;1139 1138 2 1401.3 0 AFNFLNEIK IVYLCITDDDFERSRAFNFLNEIKKRFQTT DFERSRAFNFLNEIKKRFQTTYGSRAQTAL R A F I K K 1 0 2 0 0 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1094.576 P51809 P51809 75 83 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 6.7637E-05 168.27 By MS/MS 9 0 1 1 691100 691100 0 550 1007 563 1347 1140 1140 1 13601 0 AFNSNNEQR FKLLDCLLESHRFAKAFNSNNEQRTALWKA SHRFAKAFNSNNEQRTALWKAGFKGKSKPN K A F Q R T 1 1 3 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1078.4792 Q9Y6D6 Q9Y6D6 1695 1703 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 7.6897E-05 166.52 By MS/MS 2.5 0.5 1 1 2 333860 333860 0 551 2941 564 1348;1349 1141 1141 1 98077 0 AFNSNYEQR FKLLDCLQESHSFSKAFNSNYEQRTVLWRA SHSFSKAFNSNYEQRTVLWRAGFKGKSKPN K A F Q R T 1 1 2 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1127.4996 Q9Y6D5 Q9Y6D5 1627 1635 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.00071472 140.11 By MS/MS 2 0 1 1 466990 466990 0 552 2940 565 1350 1142 1142 1 157960 0 AFNSSSFNSNTFLTR VRMAVQDAVDALMQKAFNSSSFNSNTFLTR AFNSSSFNSNTFLTRLLVHMGLLKSEDKVK K A F T R L 1 1 3 0 0 0 0 0 0 0 1 0 0 3 0 4 2 0 0 0 0 0 15 0 1691.7903 P46060 P46060 501 515 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 5.0854E-25 292.39 By MS/MS 4.5 0.5 1 1 2 1191000 1191000 0 553 908 566 1351;1352 1143 1143 1 27365 0 AFQEGIAK AEEERIRKHKAAAEKAFQEGIAKAKLVMRR HKAAAEKAFQEGIAKAKLVMRRTPIGTDRN K A F A K A 2 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 862.45487 Q9UIG0 Q9UIG0 886 893 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.020455 99.139 By MS/MS 2.5 0.5 1 1 2 168590 168590 0 554 2742 567 1353;1354 1144;1145 1145 2 40518 0 AFREEAIKFSEEQR TNETPYFMKSIDCIRAFREEAIKFSEEQRF RAFREEAIKFSEEQRFNNFLKALQEKVEIK R A F Q R F 2 2 0 0 0 1 4 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 14 2 1738.8638 P13010 P13010 641 654 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3 0.03376 72.417 By MS/MS 4.5 0.5 1 1 2 2021500 2021500 0 555 597 568 1355;1356 1146 1146 1 119880 0 AFSGYLGTDQSK FAPICNPVLCPWGKKAFSGYLGTDQSKWKA GKKAFSGYLGTDQSKWKAYDATHLVKSYPG K A F S K W 1 0 0 1 0 1 0 2 0 0 1 1 0 1 0 2 1 0 1 0 0 0 12 0 1272.5986 P10768 P10768 187 198 ESD S-formylglutathione hydrolase yes yes 2 6.8545E-06 181.87 By MS/MS 8 0 1 1 2805700 2805700 0 556 568 569 1357 1147 1147 1 35422 0 AFSMDDRIAWTHITIPESLR PPGVDSFYLEIFDERAFSMDDRIAWTHITI DRIAWTHITIPESLRQGKVEDKWYSLSGRQ R A F L R Q 2 2 0 2 0 0 1 0 1 3 1 0 1 1 1 2 2 1 0 0 0 0 20 1 2358.1791 Q9H0E2 Q9H0E2 124 143 TOLLIP Toll-interacting protein yes yes 5 0.054412 24.367 By MS/MS 7 0 1 1 229190 229190 0 557 2408 570 1358 1148 1148 0 3597.9 0 AFSPTTVNTGR SLFIATNICETIVWKAFSPTTVNTGRGMEF IVWKAFSPTTVNTGRGMEFEGAIIALFHLL K A F G R G 1 1 1 0 0 0 0 1 0 0 0 0 0 1 1 1 3 0 0 1 0 0 11 0 1149.5778 P61619 P61619 195 205 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.0027771 109.79 By MS/MS 4 2.58 1 1 1 1 1 1 6 3191400 3191400 0 558 1127 571 1359;1360;1361;1362;1363;1364 1149;1150;1151 1150 3 576770 0 AFSVFLFNTENK NCHLNENIEKGLLHRAFSVFLFNTENKLLL LHRAFSVFLFNTENKLLLQQRSDAKITFPG R A F N K L 1 0 2 0 0 0 1 0 0 0 1 1 0 3 0 1 1 0 0 1 0 0 12 0 1415.7085 Q13907 Q13907 53 64 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 2 1.3557E-34 314.35 By MS/MS 8 0 1 1 177890 177890 0 559 1414 572 1365 1152;1153 1153 2 2245.8 0 AFTGREFDELNPSAQR RRIGIFGQDEDVTSKAFTGREFDELNPSAQ FTGREFDELNPSAQRDACLNARCFARVEPS K A F Q R D 2 2 1 1 0 1 2 1 0 0 1 0 0 2 1 1 1 0 0 0 0 0 16 1 1836.8755 P16615 P16615 651 666 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 0.00027333 169.17 By MS/MS By matching 2.9 1.45 2 3 1 2 2 9 1 11413000 11367000 46148 560 635 573 1366;1367;1368;1369;1370;1371;1372;1373;1374;1375 1154;1155;1156;1157;1158;1159 1158 6 1483600 65262 AFTNYSSLNR ______________________________ ______________________________ M A F N R A 1 1 2 0 0 0 0 0 0 0 1 0 0 1 0 2 1 0 1 0 0 0 10 0 1171.5622 Q9Y6X9 Q9Y6X9 2 11 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0062012 104.42 By MS/MS 3 0 1 1 166060 166060 0 561 2953 574 1376 1160 1160 1 3038.5 0 AFTYINLDK ATEWLEGYLSSLHLKAFTYINLDKAVLGTS SSLHLKAFTYINLDKAVLGTSNFKVSASPL K A F D K A 1 0 1 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1083.5601 P02786 P02786 478 486 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0066713 99.013 By MS/MS 4 0 1 1 1362200 1362200 0 562 458 575 1377 1161 1161 1 128190 0 AFVAGVLPFK INLTERGCVTKIYGRAFVAGVLPFKVAKDM KIYGRAFVAGVLPFKVAKDMAAAAVRCIRK R A F F K V 2 0 0 0 0 0 0 1 0 0 1 1 0 2 1 0 0 0 0 2 0 0 10 0 1047.6117 O00442 O00442 196 205 RTCA RNA 3-terminal phosphate cyclase yes yes 2 0.00019771 134.66 By MS/MS 7 0 1 1 265970 265970 0 563 106 576 1378 1162 1162 1 4175.3 0 AFVDFLSDEIK ACGCGCGSLHTDGDKAFVDFLSDEIKEERK DGDKAFVDFLSDEIKEERKIQKHKTLPKMS K A F I K E 1 0 0 2 0 0 1 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 11 0 1282.6445 Q07021 Q07021 81 91 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2 1.3192E-06 186.78 By MS/MS 7.5 0.5 1 1 2 405290 405290 0 564 1299 577 1379;1380 1163 1163 1 5257.8 0 AFVDFLSDEIKEER ACGCGCGSLHTDGDKAFVDFLSDEIKEERK KAFVDFLSDEIKEERKIQKHKTLPKMSGGW K A F E R K 1 1 0 2 0 0 3 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 14 1 1696.8308 Q07021 Q07021 81 94 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2;3 0.00035384 158.34 By MS/MS 7.67 0.471 1 2 3 1165200 1165200 0 565 1299 578 1381;1382;1383 1164;1165 1165 2 15021 0 AFVDFNEGEIK LLKFDQLNIQRTQKKAFVDFNEGEIKFIPT TQKKAFVDFNEGEIKFIPTYKYDSKTDRWD K A F I K F 1 0 1 1 0 0 2 1 0 1 0 1 0 2 0 0 0 0 0 1 0 0 11 0 1267.6085 Q01968 Q01968 462 472 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 1.6861E-06 182.16 By MS/MS 2.5 1.5 1 1 2 1103300 1103300 0 566 1273 579 1384;1385 1166;1167 1167 2 109630 0 AFVENYPQFK KPKEQQKLESIADMKAFVENYPQFKKMSGT IADMKAFVENYPQFKKMSGTVSKHVTVVGE K A F F K K 1 0 1 0 0 1 1 0 0 0 0 1 0 2 1 0 0 0 1 1 0 0 10 0 1241.6081 Q9NRW7 Q9NRW7 313 322 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.019817 106.42 By MS/MS 5 0 1 1 651730 651730 0 567 2559 580 1386 1168 1168 0 6536.5 0 AFYGDTLVTGFAR VIARIVDGSRFTEFKAFYGDTLVTGFARIF FKAFYGDTLVTGFARIFGYPVGIVGNNGVL K A F A R I 2 1 0 1 0 0 0 2 0 0 1 0 0 2 0 0 2 0 1 1 0 0 13 0 1416.7038 Q9HCC0 Q9HCC0 349 361 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00020485 185.96 By MS/MS 6.5 0.5 1 1 2 3389800 3389800 0 568 2512 581 1387;1388 1169;1170 1170 2 24236 0 AFYKGTVPR TWDCGLQILKKEGLKAFYKGTVPRLGRVCL KKEGLKAFYKGTVPRLGRVCLDVAIVFVIY K A F P R L 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 1 1037.5658 P53007 P53007 274 282 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.027007 105.57 By MS/MS 8 0 1 1 335830 335830 0 569 1026 582 1389 1171 1171 1 4239.8 0 AFYLEAR EPFEVRTRLLGWDDRAFYLEARFVSLRDGF RLLGWDDRAFYLEARFVSLRDGFVCALLRF R A F A R F 2 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 7 0 868.4443 Q8WUY1 Q8WUY1 130 136 THEM6 Protein THEM6 yes yes 2 0.043896 94.262 By MS/MS 9 0 1 1 1152100 1152100 0 570 2019 583 1390 1172 1172 1 22673 0 AFYPEEISSMVLTK GDKPKVQVSYKGETKAFYPEEISSMVLTKM KAFYPEEISSMVLTKMKEIAEAYLGYPVTN K A F T K M 1 0 0 0 0 0 2 0 0 1 1 1 1 1 1 2 1 0 1 1 0 0 14 0 1613.8011 P0DMV9;P0DMV8 P0DMV9 113 126 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.000139 177.04 By MS/MS 5 0 3 3 5357500 5357500 0 571 550 584;585 1391;1392;1393 1173;1174;1175;1176;1177 1174 240 5 53733 0 AFYVNVLNEEQR RRFNTANDDNVTQVRAFYVNVLNEEQRKRL QVRAFYVNVLNEEQRKRLCENIAGHLKDAQ R A F Q R K 1 1 2 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 12 0 1480.731 P04040 P04040 445 456 CAT Catalase yes yes 2 2.0976E-08 185.96 By MS/MS 3 0 1 1 132730 0 132730 572 464 586 1394 1178 1178 1 0 16895 AGAAFFNEVR ATMATAVLIGYGVSRAGAAFFNEVRNAVFG YGVSRAGAAFFNEVRNAVFGKVAQNSIRRI R A G V R N 3 1 1 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1080.5352 O75027 O75027 201 210 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.0013261 117.31 By MS/MS 1.5 0.5 1 1 2 429040 429040 0 573 288 587 1395;1396 1179;1180 1180 2 120950 0 AGAAPTTAFGQAVIGPPGSGK ______________________________ TAFGQAVIGPPGSGKTTYCLGMSEFLRALG M A G G K T 5 0 0 0 0 1 0 5 0 1 0 1 0 1 3 1 2 0 0 1 0 0 21 0 1853.9636 Q9H9Y4 Q9H9Y4 2 22 GPN2 GPN-loop GTPase 2 yes yes 2 5.5983E-06 167.92 By MS/MS 8 0 1 1 833940 833940 0 574 2489 588 1397 1181;1182 1182 2 10528 0 AGAAPVAPEKQATELALLQR EKLCRANSRDGEAGRAGAAPVAPEKQATEL VAPEKQATELALLQRQHALLQEELRRCRRL R A G Q R Q 6 1 0 0 0 2 2 1 0 0 3 1 0 0 2 0 1 0 0 1 0 0 20 1 2033.1269 Q92974 Q92974 790 809 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 3 3.1482E-05 114.06 By MS/MS 4 0 1 1 1224900 1224900 0 575 2083 589 1398 1183 1183 1 115270 0 AGADEERAETAR ______________________________ IFKAGADEERAETARLTSFIGAIAIGDLVK K A G A R L 4 2 0 1 0 0 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 12 1 1274.5851 P78371 P78371 14 25 CCT2 T-complex protein 1 subunit beta yes yes 2 0.01991 106.4 By MS/MS 6.5 0.5 1 1 2 1675600 1675600 0 576 1222 590 1399;1400 1184 1184 1 20406 0 AGAEREFR PLDFARTRLAADVGKAGAEREFRGLGDCLV LAADVGKAGAEREFRGLGDCLVKIYKSDGI K A G F R G 2 2 0 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 1 934.46208 P05141 P05141 148 155 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.049868 71.501 By MS/MS 2.5 0.5 1 1 2 3215800 3215800 0 577 487 591 1401;1402 1185 1185 1 699260 0 AGAFDQLK RKGWKTCLICADTFRAGAFDQLKQNATKAR ICADTFRAGAFDQLKQNATKARIPFYGSYT R A G L K Q 2 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 848.43922 P61011 P61011 142 149 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.0057163 122.18 By MS/MS 6 0 1 1 2450300 2450300 0 578 1104 592 1403 1186 1186 1 16844 0 AGAFDQLKQNATK RKGWKTCLICADTFRAGAFDQLKQNATKAR FRAGAFDQLKQNATKARIPFYGSYTEMDPV R A G T K A 3 0 1 1 0 2 0 1 0 0 1 2 0 1 0 0 1 0 0 0 0 0 13 1 1390.7205 P61011 P61011 142 154 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.0026798 134.38 By MS/MS 6 0 1 1 4808000 4808000 0 579 1104 593 1404 1187 1187 1 33051 0 AGAGPSPAGDDVTFPEFLR EYQQRYGAEIVRRYRAGAGPSPAGDDVTFP PSPAGDDVTFPEFLRYLVDEDPERMNEHWM R A G L R Y 3 1 0 2 0 0 1 3 0 0 1 0 0 2 3 1 1 0 0 1 0 0 19 0 1902.9112 Q8NCH0 Q8NCH0 247 265 CHST14 Carbohydrate sulfotransferase 14 yes yes 2 0.0001472 128.22 By MS/MS 7 0 1 1 78691 78691 0 580 1951 594 1405 1188 1188 1 1235.3 0 AGAGSAAVSGAGTPVAGPTGR ______________________________ AVSGAGTPVAGPTGRDLFAEGLLEFLRPAV M A G G R D 6 1 0 0 0 0 0 6 0 0 0 0 0 0 2 2 2 0 0 2 0 0 21 0 1710.8649 O95295 O95295 2 22 SNAPIN SNARE-associated protein Snapin yes yes 2 4.5803E-06 252.14 By MS/MS 10 0 1 1 1735300 1735300 0 581 402 595 1406 1189 1189 1 93528 0 AGAGSATLSMAYAGAR TGRIQEAGTEVVKAKAGAGSATLSMAYAGA GAGSATLSMAYAGARFVFSLVDAMNGKEGV K A G A R F 6 1 0 0 0 0 0 3 0 0 1 0 1 0 0 2 1 0 1 0 0 0 16 0 1453.6984 P40926 P40926 242 257 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 3.6565E-07 215.04 By MS/MS 7.67 0.471 1 2 3 2566300 2566300 0 582 862 596;597 1407;1408;1409 1190;1191 1190 443 2 33297 0 AGAHLQGGAK EYVVESTGVFTTMEKAGAHLQGGAKRVIIS TTMEKAGAHLQGGAKRVIISAPSADAPMFV K A G A K R 3 0 0 0 0 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 10 0 908.48281 P04406 P04406 108 117 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2;3 0.00042116 168.27 By MS/MS By MS/MS 7.81 1.55 1 3 3 3 3 3 10 6 19153000 19003000 150000 583 473 598 1410;1411;1412;1413;1414;1415;1416;1417;1418;1419;1420;1421;1422;1423;1424;1425 1192;1193;1194;1195;1196;1197 1196 5 312700 234430 AGAHLQGGAKR EYVVESTGVFTTMEKAGAHLQGGAKRVIIS TMEKAGAHLQGGAKRVIISAPSADAPMFVM K A G K R V 3 1 0 0 0 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1064.5839 P04406 P04406 108 118 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0084543 124.08 By MS/MS 3.5 0.5 1 1 2 156150 0 156150 584 473 599 1426;1427 1198 1198 1 0 45719 AGAIAPCEVTVPAQNTGLGPEK IRDMLLANKVPAAARAGAIAPCEVTVPAQN EVTVPAQNTGLGPEKTSFFQALGITTKISR R A G E K T 4 0 1 0 1 1 2 3 0 1 1 1 0 0 3 0 2 0 0 2 0 0 22 0 2179.0943 P05388;Q8NHW5 P05388 113 134 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2;3 5.7506E-06 203.05 By MS/MS By matching 7.25 0.433 3 1 3 1 8191800 8158400 33330 585 491 600 1428;1429;1430;1431 1199;1200 1199 2 126630 60026 AGALCLSR HEVEVTVPDTITEWKAGALCLSRDTGLGLS DTITEWKAGALCLSRDTGLGLSPTASLRVF K A G S R D 2 1 0 0 1 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 846.43817 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 772 779 yes yes 2 0.036904 98.523 By MS/MS 9 0 1 1 0 0 0 + 586 32 601 1432 1201 1201 1 0 0 AGALQCSPSDAYTK RVQELGHGCAALVTKAGALQCSPSDAYTKK KAGALQCSPSDAYTKKELIECARRVSEKVS K A G T K K 3 0 0 1 1 1 0 1 0 0 1 1 0 0 1 2 1 0 1 0 0 0 14 0 1467.6664 Q9Y490 Q9Y490 1934 1947 TLN1 Talin-1 yes yes 2 1.104E-11 244.71 By MS/MS 2 0 1 1 659570 659570 0 587 2888 602 1433 1202 1202 1 223100 0 AGALQCSPSDAYTKK RVQELGHGCAALVTKAGALQCSPSDAYTKK AGALQCSPSDAYTKKELIECARRVSEKVSH K A G K K E 3 0 0 1 1 1 0 1 0 0 1 2 0 0 1 2 1 0 1 0 0 0 15 1 1595.7614 Q9Y490 Q9Y490 1934 1948 TLN1 Talin-1 yes yes 3 0.0059442 92.935 By MS/MS 2.5 0.5 1 1 2 708330 708330 0 588 2888 603 1434;1435 1203 1203 1 203960 0 AGALVRK ______________________________ ______________________________ M A G R K A 2 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 1 713.45481 Q9Y5U8 Q9Y5U8 2 8 MPC1 Mitochondrial pyruvate carrier 1 yes yes 2 0.052741 51.036 By MS/MS 7.5 0.5 1 1 2 1766400 1766400 0 589 2923 604 1436;1437 1204 1204 0 27541 0 AGAPADQGAEAADNQREEAADNQR EAIADQREGAAGNQRAGAPADQGAEAADNQ EAADNQREEAADNQRAGAPAEEGAEAADNQ R A G Q R A 8 2 2 3 0 3 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 24 1 2454.0756 Q9H0W5 Q9H0W5 321 344 CCDC8 Coiled-coil domain-containing protein 8 yes yes 3 1.7544E-08 134.52 By MS/MS 4.5 0.5 1 1 2 4758900 4758900 0 590 2418 605 1438;1439 1205 1205 1 401160 0 AGAPAEEGAEAADNQREEAADNQR EAADNQREEAADNQRAGAPAEEGAEAADNQ EAADNQREEAADNQRAEAPADQRSQGTDNH R A G Q R A 8 2 2 2 0 2 5 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 24 1 2469.0752 Q9H0W5 Q9H0W5 345 368 CCDC8 Coiled-coil domain-containing protein 8 yes yes 3 1.3192E-08 142.97 By MS/MS 4 0 1 1 905680 905680 0 591 2418 606 1440 1206 1206 1 85230 0 AGAPGIQEAEVSAAQGTTGTAPGAR QARAGQRAEAAHNQRAGAPGIQEAEVSAAQ VSAAQGTTGTAPGARARKQVKTVRFQTPGR R A G A R A 7 1 0 0 0 2 2 5 0 1 0 0 0 0 2 1 3 0 0 1 0 0 25 0 2267.1142 Q9H0W5 Q9H0W5 446 470 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 1.2446E-16 305.63 By MS/MS 4 0 1 1 770950 770950 0 592 2418 607 1441 1207 1207 1 72552 0 AGASIPSSGAASPR AVQGAGSLGPGSPVRAGASIPSSGAASPRG RAGASIPSSGAASPRGFPLGLSAKSGGGPG R A G P R G 4 1 0 0 0 0 0 2 0 1 0 0 0 0 2 4 0 0 0 0 0 0 14 0 1227.6208 Q9P270 Q9P270 52 65 SLAIN2 SLAIN motif-containing protein 2 yes yes 2 0.0023316 111.5 By MS/MS By matching 5 0 2 1 1 390260 374580 15682 593 2679 608 1442;1443 1208 1208 1 3756.9 13170 AGATVYITGR ASRGIGRGIALQLCKAGATVYITGRHLDTL LQLCKAGATVYITGRHLDTLRVVAQEAQSL K A G G R H 2 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 2 0 1 1 0 0 10 0 1007.54 Q96LJ7 Q96LJ7 30 39 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 2 0.023296 83.647 By MS/MS 8 0 1 1 238200 238200 0 594 2195 609 1444 1209 1209 0 3007.2 0 AGAVEQLR ENGFSVLIAACDTFRAGAVEQLRTHTRRLS AACDTFRAGAVEQLRTHTRRLSALHPPEKH R A G L R T 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 842.46102 P08240 P08240 459 466 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.014237 106.04 By MS/MS 4.5 0.5 1 1 2 3068700 3068700 0 595 522 610 1445;1446 1210 1210 1 68327 0 AGAVSALAK RFIYNRVVLEHEEVRAGAVSALAKFGAQNE EHEEVRAGAVSALAKFGAQNEEMLPSILVL R A G A K F 4 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 786.45995 Q9Y678 Q9Y678 489 497 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0024578 115.49 By MS/MS 5 0.816 1 1 1 3 3983600 3983600 0 596 2933 611 1447;1448;1449 1211 1211 1 262660 0 AGAYDFPSPEWDTVTPEAK PFWDEDQHKLYQQIKAGAYDFPSPEWDTVT DFPSPEWDTVTPEAKNLINQMLTINPAKRI K A G A K N 3 0 0 2 0 0 2 1 0 0 0 1 0 1 3 1 2 1 1 1 0 0 19 0 2079.9426 Q13555;Q9UQM7;Q13557;Q13554 Q13555 228 246 CAMK2G;CAMK2A;CAMK2D;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 2 3.6201E-17 252.14 By MS/MS 6 0 1 1 3388400 3388400 0 597 1396 612 1450 1212;1213 1212 2 23293 0 AGDAGIFVSR LGFSIAGGKGSTPYRAGDAGIFVSRIAEGG STPYRAGDAGIFVSRIAEGGAAHRAGTLQV R A G S R I 2 1 0 1 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 10 0 991.50869 Q14160 Q14160 887 896 SCRIB Protein scribble homolog yes yes 2 0.0011374 127.76 By MS/MS 2.5 0.5 1 1 2 810650 810650 0 598 1425 613 1451;1452 1214;1215 1215 2 196930 0 AGDKDDITEPAVCALR TQNSGVEALIHAILRAGDKDDITEPAVCAL GDKDDITEPAVCALRHLTSRHPEAEMAQNS R A G L R H 3 1 0 3 1 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 16 1 1729.8305 P14923 P14923 445 460 JUP Junction plakoglobin yes yes 2;3 4.2556E-10 209.25 By MS/MS 4.83 3.72 1 1 2 2 6 1825000 0 1825000 599 621 614 1453;1454;1455;1456;1457;1458 1216;1217;1218;1219;1220;1221 1217 6 0 633770 AGDMENAENILTVMR VTEAVFSALVTGHARAGDMENAENILTVMR AGDMENAENILTVMRDAGIEPGPDTYLALL R A G M R D 2 1 2 1 0 0 2 1 0 1 1 0 2 0 0 0 1 0 0 1 0 0 15 0 1662.7705 P42704 P42704 245 259 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 5.8586E-33 305.3 By MS/MS By matching 3.4 0.8 1 5 3 1 9 1 5943700 5829200 114530 600 886 615;616;617 1459;1460;1461;1462;1463;1464;1465;1466;1467;1468 1222;1223;1224;1225;1226;1227;1228 1228 466;467 7 233710 14578 AGDNKYMHLK KTQVVAGTNYYIKVRAGDNKYMHLKVFKSL YIKVRAGDNKYMHLKVFKSLPGQNEDLVLT R A G L K V 1 0 1 1 0 0 0 1 1 0 1 2 1 0 0 0 0 0 1 0 0 0 10 1 1175.5757 P01040 P01040 59 68 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2;3 0.039594 112.11 By MS/MS By matching 10 0 3 2 1 634500 602760 31735 601 449 618 1469;1470;1471 1229;1230 1229 171 1 32487 40630 AGDPILTYFPK FTSTFQTQSPPSFYRAGDPILTYFPKWSVI SFYRAGDPILTYFPKWSVISLLRQPAGVGA R A G P K W 1 0 0 1 0 0 0 1 0 1 1 1 0 1 2 0 1 0 1 0 0 0 11 0 1220.6441 Q6NUS6 Q6NUS6 210 220 TCTN3 Tectonic-3 yes yes 2 0.0009992 121.6 By MS/MS 5 0 1 1 232380 232380 0 602 1690 619 1472 1231 1231 1 2330.6 0 AGDPVILYVNK GTGHGPGVEGVTHYKAGDPVILYVNKVGPY THYKAGDPVILYVNKVGPYHNPQETYHYYQ K A G N K V 1 0 1 1 0 0 0 1 0 1 1 1 0 0 1 0 0 0 1 2 0 0 11 0 1187.655 O15321 O15321 38 48 TM9SF1 Transmembrane 9 superfamily member 1 yes yes 2 0.00099271 121.73 By MS/MS 1.5 0.5 1 1 2 288120 288120 0 603 182 620 1473;1474 1232 1232 1 86758 0 AGDREDITEPAICALR CQVGGIEALVRTVLRAGDREDITEPAICAL GDREDITEPAICALRHLTSRHQEAEMAQNA R A G L R H 3 2 0 2 1 0 2 1 0 2 1 0 0 0 1 0 1 0 0 0 0 0 16 1 1785.8679 P35222 P35222 454 469 CTNNB1 Catenin beta-1 yes yes 3 0.040157 99.796 By MS/MS 4 0 1 1 1186900 1186900 0 604 813 621 1475 1233 1233 1 111700 0 AGEARPGPTAESASGPSEDPSVNFLK WEMGPPGNWSPRPPRAGEARPGPTAESASG SASGPSEDPSVNFLKNVGESVAAALSPLGI R A G L K N 4 1 1 1 0 0 3 3 0 0 1 1 0 1 4 4 1 0 0 1 0 0 26 1 2570.2249 Q13501 Q13501 213 238 SQSTM1 Sequestosome-1 yes yes 3 2.1236E-09 138.24 By MS/MS 7 0 1 1 1208100 1208100 0 605 1391 622 1476 1234;1235 1234 2 18966 0 AGEDAVWVLDSGSVR AAVGPGAGGAARLYRAGEDAVWVLDSGSVR AGEDAVWVLDSGSVRGATANSSAAWLVQFY R A G V R G 2 1 0 2 0 0 1 2 0 0 1 0 0 0 0 2 0 1 0 3 0 0 15 0 1559.758 Q6ZRP7 Q6ZRP7 58 72 QSOX2 Sulfhydryl oxidase 2 yes yes 2 1.1909E-05 200.93 By MS/MS 4 0 1 1 417730 417730 0 606 1743 623 1477 1236 1236 1 39311 0 AGEEVIAGPERENDVPLVVRPK GAEIEPSAQAKPEKKAGEEVIAGPERENDV GPERENDVPLVVRPKVRTQATTGARPKTET K A G P K V 2 2 1 1 0 0 4 2 0 1 1 1 0 0 3 0 0 0 0 4 0 0 22 2 2373.2652 Q96D09 Q96D09 18 39 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 3 7.3422E-06 151.95 By MS/MS 4 0 1 1 1155000 1155000 0 607 2131 624 1478 1237 1237 1 108690 0 AGEKVEKPDTK ______________________________ ______________________________ M A G T K E 1 0 0 1 0 0 2 1 0 0 0 3 0 0 1 0 1 0 0 1 0 0 11 2 1200.635 Q02878 Q02878 2 12 RPL6 60S ribosomal protein L6 yes yes 2 1.1347E-08 219.5 By MS/MS 7 0 1 1 294320 294320 0 608 1281 625 1479 1238 1238 1 4620.3 0 AGELTEDEVER AHVVLRKADIDLTKRAGELTEDEVERVITI LTKRAGELTEDEVERVITIMQNPRQYKIPD R A G E R V 1 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.5677 P62269 P62269 56 66 RPS18 40S ribosomal protein S18 yes yes 2 4.2462E-13 232.41 By MS/MS By MS/MS 9.33 0.471 4 2 4 2 157140000 156420000 721290 609 1149 626 1480;1481;1482;1483;1484;1485 1239;1240;1241;1242;1243;1244 1240 6 4040500 1644800 AGELTEDEVERVITIMQNPR AHVVLRKADIDLTKRAGELTEDEVERVITI EDEVERVITIMQNPRQYKIPDWFLNRQKDV R A G P R Q 1 2 1 1 0 1 4 1 0 2 1 0 1 0 1 0 2 0 0 2 0 0 20 1 2299.1478 P62269 P62269 56 75 RPS18 40S ribosomal protein S18 yes yes 3 3.6166E-06 163.41 By MS/MS 9 0 2 2 1391400 1391400 0 610 1149 627;628 1486;1487 1245;1246 1246 653 2 27384 0 AGELTPEEEAQYK ______________________________ ______________________________ M A G Y K K 2 0 0 0 0 1 4 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 13 0 1463.678 Q9NZT1 Q9NZT1 2 14 CALML5 Calmodulin-like protein 5 yes yes 2 7.1693E-06 167.09 By matching By MS/MS 5.8 3.16 1 1 1 1 1 1 1 1 2 1 9 2015300 207080 1808200 611 2655 629 1488;1489;1490;1491;1492;1493;1494;1495;1496;1497 1247;1248;1249;1250;1251;1252;1253;1254;1255 1250 9 11161 1733800 AGELTPEEEAQYKK ______________________________ MAGELTPEEEAQYKKAFSAVDTDGNGTINA M A G K K A 2 0 0 0 0 1 4 1 0 0 1 2 0 0 1 0 1 0 1 0 0 0 14 1 1591.773 Q9NZT1 Q9NZT1 2 15 CALML5 Calmodulin-like protein 5 yes yes 2 1.6231E-09 197.73 By MS/MS By MS/MS 5.53 3.03 2 2 1 2 2 1 1 2 2 2 7 10 20854000 5114700 15739000 612 2655 630 1498;1499;1500;1501;1502;1503;1504;1505;1506;1507;1508;1509;1510;1511;1512;1513;1514 1256;1257;1258;1259;1260;1261;1262;1263;1264;1265;1266;1267;1268;1269;1270;1271;1272 1256 17 591930 14790000 AGEVPSPEAGR ASSYVLADAIDKGKKAGEVPSPEAGRSARV KGKKAGEVPSPEAGRSARVTVAVVDTFVWQ K A G G R S 2 1 0 0 0 0 2 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 11 0 1068.52 Q9UDX5 Q9UDX5 63 73 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.023368 83.883 By MS/MS 9.5 0.5 1 1 2 2286100 2286100 0 613 2711 631 1515;1516 1273 1273 1 50469 0 AGEVQEPELR AYDFYPGKIDVHWTRAGEVQEPELRGDVLH VHWTRAGEVQEPELRGDVLHNGNGTYQSWV R A G L R G 1 1 0 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 10 0 1126.5619 P25311 P25311 242 251 AZGP1 Zinc-alpha-2-glycoprotein yes yes 2 0.00066127 139.43 By MS/MS By MS/MS 4 2.26 2 1 1 1 1 1 2 2 7 2696100 480310 2215800 614 720 632 1517;1518;1519;1520;1521;1522;1523;1524;1525 1274;1275;1276;1277;1278;1279;1280;1281;1282 1274 9 39887 2086400 AGFAGDDAPR EIAALVIDNGSGMCKAGFAGDDAPRAVFPS SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261 P63261 19 28 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0010136 123.35 By MS/MS By MS/MS 5.86 3.11 2 1 1 1 1 1 2 1 2 2 6 8 62495000 60015000 2479900 615 1095;1203 633 1526;1527;1528;1529;1530;1531;1532;1533;1534;1535;1536;1537;1538;1539 1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295 1291 12 954920 4031100 AGFAGDQIPK ANQPVVIDNGSGVIKAGFAGDQIPKYCFPN SGVIKAGFAGDQIPKYCFPNYVGRPKHVRV K A G P K Y 2 0 0 1 0 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 0 10 0 1002.5134 P61163 P61163 23 32 ACTR1A Alpha-centractin no no 2 0.0063169 102.62 By MS/MS 7.5 0.5 1 1 2 26081000 26081000 0 616 1113 634 1540;1541 1296 1296 1 408470 0 AGFFGTVVEYGAER KFQDDDQTRVKGSLKAGFFGTVVEYGAERK KAGFFGTVVEYGAERKISRHSVLGAAVSVG K A G E R K 2 1 0 0 0 0 2 3 0 0 0 0 0 2 0 0 1 0 1 2 0 0 14 0 1501.7201 Q9NVH1 Q9NVH1 328 341 DNAJC11 DnaJ homolog subfamily C member 11 yes yes 2 0.00031525 191.53 By MS/MS 5 0 1 1 330820 330820 0 617 2595 635 1542 1297 1297 1 3318 0 AGFLAFTQLPK LESQFQAVRRLVASKAGFLAFTQLPKFRER VASKAGFLAFTQLPKFRERLGVKVVKALKR K A G P K F 2 0 0 0 0 1 0 1 0 0 2 1 0 2 1 0 1 0 0 0 0 0 11 0 1191.6652 O75165 O75165 440 450 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.2849E-06 187.22 By MS/MS 2 0 1 1 105200 105200 0 618 302 636 1543 1298 1298 1 35584 0 AGGADAVQTVTGGLR ______________________________ AGGADAVQTVTGGLRSLYLRKVLPLEEAYR R A G L R S 3 1 0 1 0 1 0 4 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1371.7106 Q9H223 Q9H223 15 29 EHD4 EH domain-containing protein 4 yes yes 2 5.4371E-07 236.08 By MS/MS By matching 5 0 2 1 1 2314700 2282100 32601 619 2425 637 1544;1545 1299 1299 1 22889 27378 AGGAFDPYTLVR ______________________________ AGKAGGAFDPYTLVRQPHTILRVVSWLFSI K A G V R Q 2 1 0 1 0 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 0 0 12 0 1265.6404 O43759 O43759 11 22 SYNGR1 Synaptogyrin-1 yes yes 2 0.00021522 156.83 By MS/MS 8.5 0.5 1 1 2 1735600 1735600 0 620 232 638 1546;1547 1300 1300 1 33252 0 AGGDAEPRPAEPPAWAGGAR SAAVLFSAVAVGKPRAGGDAEPRPAEPPAW EPRPAEPPAWAGGARPGPGVWDPNWDRREP R A G A R P 6 2 0 1 0 0 2 4 0 0 0 0 0 0 4 0 0 1 0 0 0 0 20 1 1931.9238 Q96HS1 Q96HS1 33 52 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 7.5725E-06 141.13 By MS/MS 8 0 1 1 3605800 3605800 0 621 2168 639 1548 1301 1301 1 45522 0 AGGDATDSSQTALDNK DGDSMCGGPGMSDPRAGGDATDSSQTALDN GGDATDSSQTALDNKASLLHSMPTHSSPRS R A G N K A 3 0 1 3 0 1 0 2 0 0 1 1 0 0 0 2 2 0 0 0 0 0 16 0 1549.6856 O75122 O75122 986 1001 CLASP2 CLIP-associating protein 2 yes yes 2 2.3933E-56 350.25 By MS/MS 3 0 1 1 575860 575860 0 622 292 640 1549 1302 1302 1 10537 0 AGGEAGVTLGQPHLSR ______________________________ GGEAGVTLGQPHLSRQDLTTLDVTKLTPLS M A G S R Q 2 1 0 0 0 1 1 4 1 0 2 0 0 0 1 1 1 0 0 1 0 0 16 0 1548.8009 P41091;Q2VIR3 P41091 2 17 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2;3 2.1935E-16 249.28 By MS/MS By MS/MS 6 3 1 1 1 1 1 2 1 1 3 10 2 83167000 82796000 371320 623 866 641;642 1550;1551;1552;1553;1554;1555;1556;1557;1558;1559;1560;1561 1303;1304;1305;1306;1307;1308;1309;1310;1311;1312 1311 10 1249200 394500 AGGFASALER GSESGSSNAKEPKTRAGGFASALERHSELL EPKTRAGGFASALERHSELLQKVEPLQKGS R A G E R H 3 1 0 0 0 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 977.49304 Q9Y2Q9 Q9Y2Q9 49 58 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.0043033 107.15 By MS/MS By matching 9.33 0.471 2 1 2 1 1963000 1881200 81790 624 2838 643 1562;1563;1564 1313;1314 1314 2 101390 186510 AGGGAAEQEELHYIPIR CGDSSPGPSASQGPRAGGGAAEQEELHYIP GGAAEQEELHYIPIRVLGRGAFGEATLYRR R A G I R V 3 1 0 0 0 1 3 3 1 2 1 0 0 0 1 0 0 0 1 0 0 0 17 0 1809.901 Q8TD19 Q8TD19 40 56 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 0.027912 72.209 By MS/MS 4 0 1 1 1749800 1749800 0 625 1995 644 1565 1315 1315 1 164670 0 AGGHHNDLEDVGR MAGFRRVANSQKCVRAGGHHNDLEDVGRDL VRAGGHHNDLEDVGRDLSHHTFFEMLGNWA R A G G R D 1 1 1 2 0 0 1 3 2 0 1 0 0 0 0 0 0 0 0 1 0 0 13 0 1375.6229 Q5JTZ9 Q5JTZ9 111 123 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2;3 0.0016161 115 By MS/MS 5.75 2.49 2 1 1 4 2689600 2689600 0 626 1613 645 1566;1567;1568;1569 1316;1317;1318 1317 3 206100 0 AGGIETIANEFSDR GLDVGSQSCYIAVARAGGIETIANEFSDRC RAGGIETIANEFSDRCTPSVISFGSKNRTI R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 14 0 1478.7001 Q92598 Q92598 20 33 HSPH1 Heat shock protein 105 kDa yes yes 2 3.3135E-05 232.56 By MS/MS 4.5 0.5 1 1 2 2163000 2163000 0 627 2059 646 1570;1571 1319 1319 1 193790 0 AGGIETIANEYSDR GIDLGFQSCYVAVARAGGIETIANEYSDRC RAGGIETIANEYSDRCTPACISFGPKNRSI R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1494.6951 P34932 P34932 20 33 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 5.3957E-17 265 By MS/MS 4 0 1 1 2157800 2157800 0 628 810 647 1572 1320 1320 1 203060 0 AGGLIYQLDSYAPR ______________________________ KAGGLIYQLDSYAPRAEAEKTFSYPLDLLL K A G P R A 2 1 0 1 0 1 0 2 0 1 2 0 0 0 1 1 0 0 2 0 0 0 14 0 1522.778 Q9Y296 Q9Y296 12 25 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 2 0.00049338 158.3 By MS/MS 8 0 1 1 194610 194610 0 629 2823 648 1573 1321 1321 1 2456.9 0 AGGPGLER FTVGPLGEGGAHKVRAGGPGLERAEAGVPA GGAHKVRAGGPGLERAEAGVPAEFSIWTRE R A G E R A 1 1 0 0 0 0 1 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 0 755.3926 P21333;O75369 P21333 2243 2250 FLNA;FLNB Filamin-A;Filamin-B no no 2 0.021009 98.523 By MS/MS 1.5 0.5 1 1 2 1470400 1470400 0 630 677;315 649 1574;1575 1322;1323 1322 2 447960 0 AGGQINHDLHER PLLLDLLERNAEAIKAGGQINHDLHERLCV AIKAGGQINHDLHERLCVSMSKLIGNHPDV K A G E R L 1 1 1 1 0 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 12 0 1345.6487 Q9NU22 Q9NU22 82 93 MDN1 Midasin yes yes 3 0.030445 98.156 By MS/MS 1.5 0.5 1 1 2 299010 299010 0 631 2580 650 1576;1577 1324 1324 1 92040 0 AGGSASAMLQPLLDNQVGFK YSFDPVGSYQRDSFKAGGSASAMLQPLLDN SAMLQPLLDNQVGFKNMQNVEHVPLSLDRA K A G F K N 3 0 1 1 0 2 0 3 0 0 3 1 1 1 1 2 0 0 0 1 0 0 20 0 2003.0146 P20618 P20618 165 184 PSMB1 Proteasome subunit beta type-1 yes yes 2 4.8436E-09 222.55 By MS/MS 9 0 1 1 193600 193600 0 632 672 651 1578 1325 1325 335 1 3810.1 0 AGGTDAPSANGEAGGESTK DQPPPTDTTHATHRKAGGTDAPSANGEAGG DAPSANGEAGGESTKGYTAEQVAAVKRVKQ K A G T K G 4 0 1 1 0 0 2 5 0 0 0 1 0 0 1 2 2 0 0 0 0 0 19 0 1675.7285 Q9NXW2 Q9NXW2 74 92 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 2.8948E-05 128.95 By MS/MS 7 0 1 1 450040 450040 0 633 2630 652 1579 1326 1326 0 7064.9 0 AGGTEIGK NRCGREKTTEAKMMKAGGTEIGKTLAEKSR TEAKMMKAGGTEIGKTLAEKSRGLFSANDW K A G G K T 1 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 0 0 0 0 8 0 731.38137 O95218 O95218 47 54 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.05062 82.241 By MS/MS 7.5 0.5 1 1 2 849290 849290 0 634 395 653 1580;1581 1327 1327 1 11702 0 AGHNVIALVGGATAR VGHLLALLGLFHLQRAGHNVIALVGGATAR AGHNVIALVGGATARLGDPSGRTKEREALE R A G A R L 4 1 1 0 0 0 0 3 1 1 1 0 0 0 0 0 1 0 0 2 0 0 15 0 1405.779 Q9Y2Z4 Q9Y2Z4 104 118 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.00024514 174.72 By MS/MS 7 0 1 1 3960000 3960000 0 635 2852 654 1582 1328 1328 1 62165 0 AGHQFGVTWR SEALEEENDETSRRKAGHQFGVTWRAKNNA TSRRKAGHQFGVTWRAKNNAERIFSLMPEK K A G W R A 1 1 0 0 0 1 0 2 1 0 0 0 0 1 0 0 1 1 0 1 0 0 10 0 1157.573 Q96EY7 Q96EY7 230 239 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2;3 0.0030737 114.4 By MS/MS 5 0 2 2 1873700 1873700 0 636 2151 655 1583;1584 1329;1330 1329 2 18792 0 AGIFQSVK YRNYDVMKDFEEMRKAGIFQSVK_______ DFEEMRKAGIFQSVK_______________ K A G V K - 1 0 0 0 0 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 8 0 848.4756 P09669 P09669 68 75 COX6C Cytochrome c oxidase subunit 6C yes yes 2 0.0043283 128.61 By MS/MS By matching 10 0 2 1 1 4902100 4828700 73356 637 542 656 1585;1586 1331 1331 1 260250 93917 AGIIASAR VDHGKSTLTDSLVCKAGIIASARAGETRFT TDSLVCKAGIIASARAGETRFTDTRKDEQE K A G A R A 3 1 0 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 757.44464 P13639 P13639 43 50 EEF2 Elongation factor 2 yes yes 2 0.0075889 113.5 By MS/MS 5.11 2.77 1 1 1 1 1 1 1 1 1 9 17550000 17550000 0 638 602 657 1587;1588;1589;1590;1591;1592;1593;1594;1595 1332;1333;1334;1335 1333 4 1329800 0 AGIICQLNAR VLHEVMEQQTLSIAKAGIICQLNARTSVLA LSIAKAGIICQLNARTSVLAAANPIESQWN K A G A R T 2 1 1 0 1 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1114.5917 P33991 P33991 601 610 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.00032221 138.83 By MS/MS 4.5 0.5 1 1 2 2847900 2847900 0 639 806 658 1596;1597 1336;1337 1336 2 236890 0 AGIISTVEVLK VDRLGLQNDLFSLARAGIISTVEVLKVMEA SLARAGIISTVEVLKVMEAFVNEPNYTVWS R A G L K V 1 0 0 0 0 0 1 1 0 2 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1128.6754 P55786 P55786 628 638 NPEPPS Puromycin-sensitive aminopeptidase yes yes 2 0.029538 83.998 By MS/MS 4 0 1 1 348830 348830 0 640 1062 659 1598 1338 1338 0 32828 0 AGILTTLNAR AIHEVMEQQTISIAKAGILTTLNARCSILA ISIAKAGILTTLNARCSILAAANPAYGRYN K A G A R C 2 1 1 0 0 0 0 1 0 1 2 0 0 0 0 0 2 0 0 0 0 0 10 0 1028.5978 P33993 P33993 472 481 MCM7 DNA replication licensing factor MCM7 yes yes 2 2.1837E-10 193.1 By MS/MS 4.5 0.5 1 1 2 8626600 8626600 0 641 808 660 1599;1600 1339;1340 1340 2 317420 0 AGIPKEEVK ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN QGAIEKAGIPKEEVKEAYMGNVLQGGEGQA K A G V K E 1 0 0 0 0 0 2 1 0 1 0 2 0 0 1 0 0 0 0 1 0 0 9 1 969.5495 P24752 P24752 79 87 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0041502 136.27 By MS/MS 7 0 1 1 3043800 3043800 0 642 716 661 1601 1341 1341 1 47783 0 AGIPKEEVKEAYMGNVLQGGEGQAPTR ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN MGNVLQGGEGQAPTRQAVLGAGLPISTPCT K A G T R Q 3 1 1 0 0 2 4 5 0 1 1 2 1 0 2 0 1 0 1 2 0 0 27 2 2828.4127 P24752 P24752 79 105 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 3;4 3.1356E-06 100.7 By MS/MS 7 0 3 3 5165300 5165300 0 643 716 662;663 1602;1603;1604 1342;1343;1344;1345;1346 1342 354 5 81086 0 AGIRGIPPK SNMTQLESSTSKMLKAGIRGIPPKIEALPS TSKMLKAGIRGIPPKIEALPSDISIDEGKV K A G P K I 1 1 0 0 0 0 0 2 0 2 0 1 0 0 2 0 0 0 0 0 0 0 9 1 907.56034 Q8WZ42 Q8WZ42 34249 34257 TTN Titin yes yes 3 0.0038598 107.29 By MS/MS 4.5 0.5 1 1 2 631000 631000 0 644 2044 664 1605;1606 1347 1347 1 46792 0 AGITTTLNSR AIHEAMEQQTISIAKAGITTTLNSRCSVLA ISIAKAGITTTLNSRCSVLAAANSVFGRWD K A G S R C 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 3 0 0 0 0 0 10 0 1032.5564 P33992 P33992 472 481 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0012888 118.03 By MS/MS 4 0 1 1 2119200 2119200 0 645 807 665 1607 1348 1348 1 199430 0 AGIVQEDVQPPGLK LMRLEEYKKEQAINRAGIVQEDVQPPGLKV RAGIVQEDVQPPGLKVWSDPFGRK______ R A G L K V 1 0 0 1 0 2 1 2 0 1 1 1 0 0 2 0 0 0 0 2 0 0 14 0 1449.7827 Q8N5G0 Q8N5G0 45 58 SMIM20 Small integral membrane protein 20 yes yes 2 0.0004824 155.47 By MS/MS 10 0 1 1 845260 845260 0 646 1922 666 1608 1349 1349 1 45557 0 AGIVTSLQAR SIHEAMEQQSISISKAGIVTSLQARCTVIA ISISKAGIVTSLQARCTVIAAANPIGGRYD K A G A R C 2 1 0 0 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1014.5822 P49736 P49736 614 623 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00045032 134.25 By MS/MS 3 0 1 1 1457600 1457600 0 647 958 667 1609 1350 1350 1 26670 0 AGKGEVTFEDVK APDALFMVAFQLFDKAGKGEVTFEDVKQVF FDKAGKGEVTFEDVKQVFGQTTIHQHIPFN K A G V K Q 1 0 0 1 0 0 2 2 0 0 0 2 0 1 0 0 1 0 0 2 0 0 12 1 1278.6456 Q9UJS0 Q9UJS0 102 113 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 0.0014267 144.7 By MS/MS 5.33 0.471 2 1 3 6488100 6488100 0 648 2748 668 1610;1611;1612 1351;1352 1352 2 63528 0 AGLAAQPPAASQGAQTPGEK ______________________________ QPPAASQGAQTPGEKAEAAATLKAAPGWLK R A G E K A 6 0 0 0 0 3 1 3 0 0 1 1 0 0 3 1 1 0 0 0 0 0 20 0 1848.933 Q9NPB0 Q9NPB0 15 34 SAYSD1 SAYSvFN domain-containing protein 1 yes yes 2 2.67E-05 164.88 By MS/MS 9 0 1 1 312140 312140 0 649 2530 669 1613 1353 1353 1 6142.9 0 AGLAMPGPPLGPVLGQR LRKPEVGGVIRAIVRAGLAMPGPPLGPVLG LAMPGPPLGPVLGQRGVSINQFCKEFNERT R A G Q R G 2 1 0 0 0 1 0 4 0 0 3 0 1 0 4 0 0 0 0 1 0 0 17 0 1629.9025 Q9Y3B7 Q9Y3B7 26 42 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.00024963 139.43 By MS/MS 9 0 2 2 728240 728240 0 650 2866 670;671 1614;1615 1354;1355;1356;1357;1358 1356 1191 5 14332 0 AGLELLSDQGYR ______________________________ ______________________________ M A G Y R V 1 1 0 1 0 1 1 2 0 0 3 0 0 0 0 1 0 0 1 0 0 0 12 0 1320.6674 Q9NPD3 Q9NPD3 2 13 EXOSC4 Exosome complex component RRP41 yes yes 2 0.0010721 126.03 By MS/MS 7.5 0.5 1 1 2 1440800 1440800 0 651 2531 672 1616;1617 1359;1360 1360 2 18607 0 AGLENTVAETECR LQGLEIELQSQLSMKAGLENTVAETECRYA MKAGLENTVAETECRYALQLQQIQGLISSI K A G C R Y 2 1 1 0 1 0 3 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 13 0 1448.6566 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 P13646 343 355 KRT13 Keratin, type I cytoskeletal 13 no no 2 0.0038153 124.6 By MS/MS 1 0 1 1 79427 0 79427 + 652 603;51 673 1618 1361 1361 1 0 79427 AGLKEAPEGWQTPK KQIKFEKDLRRIWLKAGLKEAPEGWQTPKI KAGLKEAPEGWQTPKIYLRGK_________ K A G P K I 2 0 0 0 0 1 2 2 0 0 1 2 0 0 2 0 1 1 0 0 0 0 14 1 1510.778 Q9NWT8 Q9NWT8 180 193 AURKAIP1 Aurora kinase A-interacting protein yes yes 2;3 3.4386E-05 202 By MS/MS 10 0 2 2 1679400 1679400 0 653 2612 674 1619;1620 1362;1363 1363 2 90511 0 AGLLATLQDTQK IQKLKQQLMQMEREKAGLLATLQDTQKQLE REKAGLLATLQDTQKQLEHTRGSLSEQQEK K A G Q K Q 2 0 0 1 0 2 0 1 0 0 3 1 0 0 0 0 2 0 0 0 0 0 12 0 1257.6929 Q8TD16 Q8TD16 360 371 BICD2 Protein bicaudal D homolog 2 yes yes 2 0.0013523 146.11 By MS/MS 4 0 1 1 616650 616650 0 654 1994 675 1621 1364 1364 1 58031 0 AGLLNTSGTK LQASHSELQVPTPGRAGLLNTSGTKGLECS PTPGRAGLLNTSGTKGLECSPSTPTMNSYF R A G T K G 1 0 1 0 0 0 0 2 0 0 2 1 0 0 0 1 2 0 0 0 0 0 10 0 960.52401 Q08AM6 Q08AM6 503 512 VAC14 Protein VAC14 homolog yes yes 2 0.011362 91.265 By MS/MS 4.5 0.5 1 1 2 1873300 1873300 0 655 1316 676 1622;1623 1365;1366 1366 2 133900 0 AGLLSQAK PGTRDPTRLRPVYARAGLLSQAKGSAYLEA LRPVYARAGLLSQAKGSAYLEAGGTKVLCA R A G A K G 2 0 0 0 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 786.45995 Q5RKV6 Q5RKV6 43 50 EXOSC6 Exosome complex component MTR3 yes yes 2 0.021068 98.458 By MS/MS 8 0 1 1 476520 476520 0 656 1617 677 1624 1367 1367 1 6016 0 AGLNCSTENMPIK CYGYEGIDAVKEALRAGLNCSTENMPIKIN LRAGLNCSTENMPIKINLIAPPRYVMTTTT R A G I K I 1 0 2 0 1 0 1 1 0 1 1 1 1 0 1 1 1 0 0 0 0 0 13 0 1433.6643 P05198 P05198 214 226 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.0002642 155.11 By MS/MS 7 0 2 2 1354400 1354400 0 657 489 678;679 1625;1626 1368;1369 1368 191 2 21262 0 AGLQFPVGR QGGKARAKAKTRSSRAGLQFPVGRVHRLLR KTRSSRAGLQFPVGRVHRLLRKGNYAERVG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P0C0S8;Q93077;P20671;Q96QV6;Q8IUE6;Q7L7L0;P04908;P16104;Q71UI9;P0C0S5 Q99878 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AC;HIST1H2AD;HIST1H2AA;HIST2H2AB;HIST3H2A;HIST1H2AB;H2AFX;H2AFV;H2AFZ Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 1-D;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2AX;Histone H2A.V;Histone H2A.Z yes no 2 0.0014637 122.74 By MS/MS By MS/MS 9.5 0.5 2 2 2 2 5194600 5036200 158390 658 546 680 1627;1628;1629;1630 1370;1371 1371 2 268740 235980 AGLQTSPPIVPLDR LAKAVLRMLLLLWFKAGLQTSPPIVPLDRE KAGLQTSPPIVPLDRETQAQPPDGDHSPGN K A G D R E 1 1 0 1 0 1 0 1 0 1 2 0 0 0 3 1 1 0 0 1 0 0 14 0 1462.8144 Q9Y5Y5 Q9Y5Y5 133 146 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.026184 80.69 By MS/MS 7 0 1 1 887280 887280 0 659 2928 681 1631 1372 1372 1 13929 0 AGLSKLPDLK RLRERRKKQKLAKERAGLSKLPDLKDAEAV LAKERAGLSKLPDLKDAEAVQKFFLEEIQL R A G L K D 1 0 0 1 0 0 0 1 0 0 3 2 0 0 1 1 0 0 0 0 0 0 10 1 1040.623 Q15388 Q15388 52 61 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 3 0.0066525 119.22 By MS/MS 10 0 1 1 396070 396070 0 660 1506 682 1632 1373 1373 1 21347 0 AGLSKLPDLKDAEAVQK RLRERRKKQKLAKERAGLSKLPDLKDAEAV LSKLPDLKDAEAVQKFFLEEIQLGEELLAQ R A G Q K F 3 0 0 2 0 1 1 1 0 0 3 3 0 0 1 1 0 0 0 1 0 0 17 2 1781.9887 Q15388 Q15388 52 68 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 3 0.00034884 130.47 By MS/MS 10 0 1 1 1390700 1390700 0 661 1506 683 1633 1374 1374 1 74953 0 AGLSNYGNPR GSIAAGYLSDRAMAKAGLSNYGNPRHGLLL RAMAKAGLSNYGNPRHGLLLFMMAGMTVSM K A G P R H 1 1 2 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 0 1047.5098 O43826 O43826 291 300 SLC37A4 Glucose-6-phosphate translocase yes yes 2 0.0077347 106.88 By MS/MS 1 0 1 1 0 0 0 662 241 684 1634 1375 1375 1 0 0 AGLSQSLFER HCQLGPVVMCKKAAKAGLSQSLFERLVVLG KKAAKAGLSQSLFERLVVLGIRPIRLQVQY K A G E R L 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 10 0 1106.572 Q92900 Q92900 689 698 UPF1 Regulator of nonsense transcripts 1 yes yes 2 3.2987E-06 178.84 By MS/MS 3 0 1 1 1314200 1314200 0 663 2077 685 1635 1376 1376 1 24046 0 AGLSVLLK ENLTPWKKLLPCSSKAGLSVLLKADRLFHT LLPCSSKAGLSVLLKADRLFHTSYHSQAVH K A G L K A 1 0 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 1 0 0 8 0 799.51674 Q969N2 Q969N2 199 206 PIGT GPI transamidase component PIG-T yes yes 2 0.023865 95.352 By MS/MS 5 0 1 1 417190 417190 0 664 2093 686 1636 1377 1377 1 4184.2 0 AGLTDLQR ______________________________ ______________________________ M A G Q R L 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 872.47158 O75935 O75935 2 9 DCTN3 Dynactin subunit 3 yes yes 2 0.002758 138.83 By MS/MS 9 0 1 1 2452100 2452100 0 665 355 687 1637 1378 1378 1 48258 0 AGLTFNHDPPLSQNQR RMREWGAEALTSLIKAGLTFNHDPPLSQNQ GLTFNHDPPLSQNQRLQLLLLNPLKEMSNI K A G Q R L 1 1 2 1 0 2 0 1 1 0 2 0 0 1 2 1 1 0 0 0 0 0 16 0 1793.8809 Q7Z3U7 Q7Z3U7 845 860 MON2 Protein MON2 homolog yes yes 3 0.00012236 180.3 By MS/MS 2 0 1 1 403180 403180 0 666 1787 688 1638 1379 1379 1 136370 0 AGLVDDFEK PPAIDWAYYKANVAKAGLVDDFEKKFNALK KANVAKAGLVDDFEKKFNALKVPVPEDKYT K A G E K K 1 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 992.48148 O75947 O75947 64 72 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.0095404 101.25 By MS/MS By matching 9.33 0.471 2 1 2 1 12944000 12853000 90791 667 356 689 1639;1640;1641 1380 1380 1 257150 207030 AGLVDDFEKK PPAIDWAYYKANVAKAGLVDDFEKKFNALK ANVAKAGLVDDFEKKFNALKVPVPEDKYTA K A G K K F 1 0 0 2 0 0 1 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1120.5764 O75947 O75947 64 73 ATP5H ATP synthase subunit d, mitochondrial yes yes 2;3 6.6629E-05 168.26 By MS/MS 9 0 2 2 14375000 14375000 0 668 356 690 1642;1643 1381;1382 1381 2 282910 0 AGLVELLLR AGAGPAMAVWTRATKAGLVELLLRERWVRV WTRATKAGLVELLLRERWVRVVAELSGESL K A G L R E 1 1 0 0 0 0 1 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 Q13425 Q13425 25 33 SNTB2 Beta-2-syntrophin yes yes 2 0.002505 114.89 By MS/MS 6 0 1 1 187400 187400 0 669 1382 691 1644 1383 1383 1 1288.2 0 AGLYGLPR IGGVDMVTDDDRRWKAGLYGLPRRSGKLKD DDDRRWKAGLYGLPRRSGKLKDLSRFDASF K A G P R R 1 1 0 0 0 0 0 2 0 0 2 0 0 0 1 0 0 0 1 0 0 0 8 0 845.47594 P49327 P49327 42 49 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0078954 113.08 By MS/MS By matching 4.56 3.02 2 1 1 1 1 1 1 1 8 1 16697000 16684000 13354 670 946 692 1645;1646;1647;1648;1649;1650;1651;1652;1653 1384;1385;1386;1387;1388;1389;1390 1390 7 2366500 13354 AGMSAEQAQGLLEK EDITEPQSILAAAEKAGMSAEQAQGLLEKI KAGMSAEQAQGLLEKIATPKVKNQLKETTE K A G E K I 3 0 0 0 0 2 2 2 0 0 2 1 1 0 0 1 0 0 0 0 0 0 14 0 1431.7028 Q9Y2Q3 Q9Y2Q3 145 158 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 0.00024535 171.62 By MS/MS 8.5 0.5 1 1 2 1367400 1367400 0 671 2837 693 1654;1655 1391 1391 1 20045 0 AGNFYVPAEPK QMYRTEIRMARMARKAGNFYVPAEPKLAFV MARKAGNFYVPAEPKLAFVIRIRGINGVSP K A G P K L 2 0 1 0 0 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 11 0 1191.5924 P18124 P18124 78 88 RPL7 60S ribosomal protein L7 yes yes 2 0.0002647 137.46 By MS/MS By matching 8 0 2 1 1 3479800 3430100 49787 672 652 694 1656;1657 1392 1392 1 43304 67185 AGNILLSEPGLVK LAYLHSHNMIHRDVKAGNILLSEPGLVKLG VKAGNILLSEPGLVKLGDFGSASIMAPANS K A G V K L 1 0 1 0 0 0 1 2 0 1 3 1 0 0 1 1 0 0 0 1 0 0 13 0 1309.7606 Q9UL54 Q9UL54 154 166 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.00036812 145.28 By MS/MS 3 0 1 1 443940 443940 0 673 2770 695 1658 1393 1393 1 8122.9 0 AGNLGGGVVTIER NFEQFLQERIKVNGKAGNLGGGVVTIERSK GKAGNLGGGVVTIERSKSKITVTSEVPFSK K A G E R S 1 1 1 0 0 0 1 4 0 1 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1241.6728 P35268 P35268 53 65 RPL22 60S ribosomal protein L22 yes yes 2 9.1817E-05 174.42 By MS/MS By MS/MS 9.5 0.5 2 2 2 2 9275400 9068700 206740 674 819 696 1659;1660;1661;1662 1394;1395 1395 2 477530 305380 AGPELLLDSNIR ______________________________ ______________________________ M A G I R L 1 1 1 1 0 0 1 1 0 1 3 0 0 0 1 1 0 0 0 0 0 0 12 0 1296.7038 Q9P0I2 Q9P0I2 2 13 EMC3 ER membrane protein complex subunit 3 yes yes 2 1.7687E-05 177.57 By MS/MS 8 0 1 1 1505300 1505300 0 675 2663 697 1663 1396 1396 1 19004 0 AGPESDAQYQFTGIK ______________________________ AGPESDAQYQFTGIKKYFNSYTLTGRMNCV M A G I K K 2 0 0 1 0 2 1 2 0 1 0 1 0 1 1 1 1 0 1 0 0 0 15 0 1610.7577 Q96IX5 Q96IX5 2 16 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2 4.607E-56 350.25 By MS/MS 10 0 1 1 5284800 5284800 0 676 2175 698 1664 1397 1397 1 284830 0 AGPESDAQYQFTGIKK ______________________________ GPESDAQYQFTGIKKYFNSYTLTGRMNCVL M A G K K Y 2 0 0 1 0 2 1 2 0 1 0 2 0 1 1 1 1 0 1 0 0 0 16 1 1738.8526 Q96IX5 Q96IX5 2 17 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2;3 1.5896E-23 281.32 By MS/MS 10 0 2 2 11519000 11519000 0 677 2175 699 1665;1666 1398;1399;1400 1399 3 620860 0 AGPGVGEAR SWGKLKRRVKGWAPRAGPGVGEARLASTAV KGWAPRAGPGVGEARLASTAVESAGVSSAP R A G A R L 2 1 0 0 0 0 1 3 0 0 0 0 0 0 1 0 0 0 0 1 0 0 9 0 812.41407 Q9H0W5 Q9H0W5 217 225 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 0.04185 79.474 By MS/MS 4 0 1 1 559600 559600 0 678 2418 700 1667 1401 1401 1 52662 0 AGPIWDLR PRDLFEDELVPLFEKAGPIWDLRLMMDPLT LVPLFEKAGPIWDLRLMMDPLTGLNRGYAF K A G L R L 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 8 0 926.4974 O43390;O60506 O60506 185 192 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.022839 96.492 By MS/MS 5 0 1 1 756760 756760 0 679 205;261 701 1668 1402 1402 1 7589.9 0 AGPLQGGGAR ______________________________ ______________________________ M A G A R A 2 1 0 0 0 1 0 4 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 882.46716 Q9P015 Q9P015 2 11 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.0065431 103.74 By MS/MS 8 0 2 2 1738400 1738400 0 680 2659 702;703 1669;1670 1403;1404 1404 2 21947 0 AGQAFRK ______________________________ ______________________________ M A G R K F 2 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 7 1 776.42932 P61604 P61604 2 8 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.025237 113.08 By MS/MS 10 0 1 1 4762700 4762700 0 681 1126 704 1671 1405 1405 1 256690 0 AGQAVDDFIEK VSKLKKPRRIILLVKAGQAVDDFIEKLVPL LLVKAGQAVDDFIEKLVPLLDTGDIIIDGG K A G E K L 2 0 0 2 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 11 0 1191.5772 P52209 P52209 77 87 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.0019316 99.752 By MS/MS 7.67 1.7 1 1 1 3 11632000 11632000 0 682 1011 705 1672;1673;1674 1406;1407;1408 1407 3 117990 0 AGQEDVLFPVAR AEQGGQASDRGYLVRAGQEDVLFPVARAQV LVRAGQEDVLFPVARAQVCGGFILHEAVAP R A G A R A 2 1 0 1 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 0 12 0 1300.6776 Q5JTZ9 Q5JTZ9 581 592 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 5.2376E-05 173.64 By MS/MS 4.5 1.12 1 1 1 1 4 16623000 16623000 0 683 1613 706 1675;1676;1677;1678 1409;1410;1411 1409 3 1238900 0 AGQQALR KLTEVLTDSHVKVQKAGQQALRQIGSVIRN DSHVKVQKAGQQALRQIGSVIRNPEILAIA K A G L R Q 2 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 742.40859 Q92616 Q92616 1557 1563 GCN1L1 Translational activator GCN1 yes yes 2 0.0054613 153.67 By MS/MS 2 0.816 1 1 1 3 1566900 1566900 0 684 2064 707 1679;1680;1681 1412 1412 1 392660 0 AGQSAAGAAPGGGVDTR ______________________________ QSAAGAAPGGGVDTRDAEMPATEKDLAEDA R A G T R D 5 1 0 1 0 1 0 5 0 0 0 0 0 0 1 1 1 0 0 1 0 0 17 0 1441.691 P21333 P21333 8 24 FLNA Filamin-A yes yes 2 2.6245E-17 263.98 By MS/MS 3 1.41 1 1 1 1 1 5 3422500 3422500 0 685 677 708 1682;1683;1684;1685;1686 1413;1414;1415 1415 2 647550 0 AGQTTYSGVIDCFR TPADVIKTRLQVAARAGQTTYSGVIDCFRK RAGQTTYSGVIDCFRKILREEGPKALWKGA R A G F R K 1 1 0 1 1 1 0 2 0 1 0 0 0 1 0 1 2 0 1 1 0 0 14 0 1573.7195 Q9UJS0;O75746 Q9UJS0 554 567 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 4.741E-11 232.78 By MS/MS 6.2 1.17 2 1 1 1 5 21664000 21664000 0 686 2748;344 709 1687;1688;1689;1690;1691 1416;1417;1418;1419 1416 4 220850 0 AGQTTYSGVIDCFRK TPADVIKTRLQVAARAGQTTYSGVIDCFRK AGQTTYSGVIDCFRKILREEGPKALWKGAG R A G R K I 1 1 0 1 1 1 0 2 0 1 0 1 0 1 0 1 2 0 1 1 0 0 15 1 1701.8145 Q9UJS0;O75746 Q9UJS0 554 568 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 1.4918E-10 237.53 By MS/MS 5 0 1 1 7738100 7738100 0 687 2748;344 710 1692 1420 1420 1 77609 0 AGQVFLEELGNHK FGWFLTKKSSETLRKAGQVFLEELGNHKAF RKAGQVFLEELGNHKAFKKELRQFVPGDEP K A G H K A 1 0 1 0 0 1 2 2 1 0 2 1 0 1 0 0 0 0 0 1 0 0 13 0 1440.7361 P09543 P09543 205 217 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 8.7891E-08 214.67 By MS/MS 7 0 1 1 1295200 1295200 0 688 537 711 1693 1421 1421 1 20332 0 AGRLPACVVDCGTGYTK ______________________________ RLPACVVDCGTGYTKLGYAGNTEPQFIIPS M A G T K L 2 1 0 1 2 0 0 3 0 0 1 1 0 0 1 0 2 0 1 2 0 0 17 1 1823.8658 P61158 P61158 2 18 ACTR3 Actin-related protein 3 yes yes 2 0.00014276 181.71 By MS/MS 7 0.816 1 1 1 3 3911800 3911800 0 689 1111 712 1694;1695;1696 1422 1422 1 33162 0 AGRPQFDDQGK YVDFPITDVLQMMGRAGRPQFDDQGKAVIL MMGRAGRPQFDDQGKAVILVHDIKKDFYKK R A G G K A 1 1 0 2 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 11 1 1217.5789 Q8N3C0 Q8N3C0 1690 1700 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 3 0.018258 81.017 By MS/MS 1 0 1 1 212910 212910 0 690 1911 713 1697 1423 1423 1 51304 0 AGRPQYDTK WTELGALDILQMLGRAGRPQYDTKGEGILI LQMLGRAGRPQYDTKGEGILITSHGELQYY R A G T K G 1 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 1 0 0 0 9 1 1034.5145 O75643 O75643 856 864 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 3 0.031944 106.6 By MS/MS 1.5 0.5 1 1 2 335610 335610 0 691 340 714 1698;1699 1424 1424 1 99554 0 AGSQVVATTAR ______________________________ SAPRAGSQVVATTARHSAAYRADPLRVSSR R A G A R H 3 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 2 0 0 11 0 1059.5673 Q9BWH2 Q9BWH2 8 18 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 1.9964E-05 163.9 By MS/MS 9 0 1 1 505300 505300 0 692 2348 715 1700 1425 1425 1 9944.3 0 AGSRLETVGSIFSR ______________________________ MAGSRLETVGSIFSRTRDLVRAGVLKEKPL M A G S R T 1 2 0 0 0 0 1 2 0 1 1 0 0 1 0 3 1 0 0 1 0 0 14 1 1478.7841 Q9Y3D9 Q9Y3D9 2 15 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00024044 171.49 By MS/MS By matching 9 0 2 1 1 2765800 2689600 76221 693 2875 716 1701;1702 1426 1426 1 52932 173810 AGSSESIAAFIQR VQGVLSSLLGSLGARAGSSESIAAFIQRLS ARAGSSESIAAFIQRLSGSSNIFEPGADGA R A G Q R L 3 1 0 0 0 1 1 1 0 2 0 0 0 1 0 3 0 0 0 0 0 0 13 0 1335.6783 P46379 P46379 720 732 BAG6 Large proline-rich protein BAG6 yes yes 2 9.8046E-06 196.48 By MS/MS 3.5 0.5 1 1 2 753120 753120 0 694 911 717 1703;1704 1427 1427 1 27544 0 AGSSGSSSGGGGGGPGGR PGMERQNRRPGPGGKAGSSGSSSGGGGGGP SGSSSGGGGGGPGGRTGPGRGDKRSWPSPK K A G G R T 1 1 0 0 0 0 0 10 0 0 0 0 0 0 1 5 0 0 0 0 0 0 18 0 1347.5763 P48634 P48634 1405 1422 PRRC2A Protein PRRC2A yes yes 2 0.0085663 93.766 By MS/MS 2 0 1 1 25569 25569 0 695 938 718 1705 1428 1428 1 8648.4 0 AGSSTPGDAPPAVAEVQGR AVGDTSAAGSSEQPRAGSSTPGDAPPAVAE TPGDAPPAVAEVQGRSDGSGESAQPPEDSS R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00010312 179.5 By MS/MS 1.5 0.5 1 1 2 905510 905510 0 696 1802 719 1706;1707 1429;1430 1430 2 258100 0 AGSVELLGAMAYCAPK PSLLAALEEESWRTKAGSVELLGAMAYCAP GSVELLGAMAYCAPKQLSSCLPNIVPKLTE K A G P K Q 4 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 0 0 1 1 0 0 16 0 1636.7953 Q92616 Q92616 1515 1530 GCN1L1 Translational activator GCN1 yes yes 2 1.7156E-16 251.24 By MS/MS 2.33 0.471 2 1 3 1392900 1392900 0 697 2064 720;721 1708;1709;1710 1431;1432;1433 1431 992 3 420090 0 AGTAFYIDQCAVR RDTTETDLKQRREIRAGTAFYIDQCAVRAA IRAGTAFYIDQCAVRAATEGRTLILEGLEK R A G V R A 3 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 1 0 1 1 0 0 13 0 1470.6925 A3KMH1 A3KMH1 153 165 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 3.9565E-08 220.82 By MS/MS 2 0 1 1 335130 335130 0 698 14 722 1711 1434 1434 1 113350 0 AGTGVDNVDLEAATR ADVINAAEKLQVVGRAGTGVDNVDLEAATR AGTGVDNVDLEAATRKGILVMNTPNGNSLS R A G T R K 3 1 1 2 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1487.7216 O43175 O43175 76 90 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.6165E-16 273.74 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 73341000 72864000 476560 699 195 723 1712;1713;1714;1715;1716;1717 1435 1435 1 672850 488340 AGTGVDNVDLEAATRK ADVINAAEKLQVVGRAGTGVDNVDLEAATR GTGVDNVDLEAATRKGILVMNTPNGNSLSA R A G R K G 3 1 1 2 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 2 0 0 16 1 1615.8166 O43175 O43175 76 91 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.7349E-55 338.47 By MS/MS 6 0 1 1 4273800 4273800 0 700 195 724 1718 1436 1436 1 29379 0 AGTVVLDDVELR ______________________________ ______________________________ M A G L R E 1 1 0 2 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 3 0 0 12 0 1285.6878 P25205 P25205 2 13 MCM3 DNA replication licensing factor MCM3 yes yes 2 7.432E-06 182.64 By MS/MS 5 0.894 2 1 2 5 3861100 3861100 0 701 719 725 1719;1720;1721;1722;1723 1437;1438;1439;1440 1437 4 344840 0 AGTVVLDDVELREAQR ______________________________ GTVVLDDVELREAQRDYLDFLDDEEDQGIY M A G Q R D 2 2 0 2 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 3 0 0 16 1 1769.9272 P25205 P25205 2 17 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0011744 109.16 By MS/MS 4 0 1 1 782710 782710 0 702 719 726 1724 1441;1442 1442 2 73658 0 AGVAPLQVK VRANLPQSFQVDTSKAGVAPLQVKVQGPKG QVDTSKAGVAPLQVKVQGPKGLVEPVDVVD K A G V K V 2 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 9 0 881.53345 P21333 P21333 1478 1486 FLNA Filamin-A yes yes 2 0.051748 75.189 By MS/MS 2 0.816 1 1 1 3 2361300 2361300 0 703 677 727 1725;1726;1727 1443 1443 1 508890 0 AGVETTTPSK GAVTVAWKADSSPVKAGVETTTPSKQSNNK SSPVKAGVETTTPSKQSNNKYAASSYLSLT K A G S K Q 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 1 3 0 0 1 0 0 10 0 989.50294 P0DOY3;P0DOY2 P0DOY3 51 60 yes no 2 0.0053873 116.52 By MS/MS 5.25 3.15 1 1 1 1 1 1 1 1 8 532430 0 532430 704 552 728 1728;1729;1730;1731;1732;1733;1734;1735 1444;1445;1446;1447 1445 4 0 592340 AGVFPYR ______________________________ ______________________________ M A G Y R G 1 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 7 0 808.42317 Q6P2Q9 Q6P2Q9 2 8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 1 0.036611 67.377 By MS/MS 6 3 1 1 2 588690 588690 0 705 1708 729 1736;1737 1448;1449 1449 0 11243 0 AGVHAPEEVGPR ASEAQEGLQKFKVVRAGVHAPEEVGPREAG VVRAGVHAPEEVGPREAGLRRRKGPTKTPE R A G P R E 2 1 0 0 0 0 2 2 1 0 0 0 0 0 2 0 0 0 0 2 0 0 12 0 1217.6153 Q96NT0 Q96NT0 86 97 CCDC115 Coiled-coil domain-containing protein 115 yes yes 3 0.0020188 111.27 By MS/MS 9 0 1 1 800740 800740 0 706 2204 730 1738 1450 1450 1 15759 0 AGVKDTENR EMREDEKPLVLEMLKAGVKDTENRVALHAL VLEMLKAGVKDTENRVALHALTRPPALLLL K A G N R V 1 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 9 1 988.49377 Q8WUY8 Q8WUY8 25 33 NAT14 N-acetyltransferase 14 yes yes 3 0.0089598 109.44 By MS/MS 9 0 1 1 245510 245510 0 707 2020 731 1739 1451 1451 1 4831.7 0 AGVLAERK MEFVSEVQRKVHEARAGVLAERKALKDAAE RKVHEARAGVLAERKALKDAAEHRELMAWN R A G R K A 2 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 1 842.4974 Q9BYN8 Q9BYN8 87 94 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.0083938 138.83 By MS/MS 8.5 0.5 1 1 2 1349000 1349000 0 708 2374 732 1740;1741 1452 1452 1 19911 0 AGVLAGHDNR DDFNCNIWDAMKGDRAGVLAGHDNRVSCLG MKGDRAGVLAGHDNRVSCLGVTDDGMAVAT R A G N R V 2 1 1 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1008.5101 P62879;P62873 P62879 305 314 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 2 0.0021026 112.11 By MS/MS 8 0 1 1 1897800 1897800 0 709 1181 733 1742 1453 1453 1 23959 0 AGVLAHLEEER DSNLYRIGQSKVFFRAGVLAHLEEERDLKI VFFRAGVLAHLEEERDLKITDVIIGFQACC R A G E R D 2 1 0 0 0 0 3 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1222.6306 P35580;P35579 P35579 765 775 MYH10;MYH9 Myosin-10;Myosin-9 no no 2 0.00052204 131.12 By MS/MS 2.5 0.5 1 1 2 2075400 2075400 0 710 824;825 734 1743;1744 1454 1454 1 640240 0 AGVLAHLEEERDLK DSNLYRIGQSKVFFRAGVLAHLEEERDLKI RAGVLAHLEEERDLKITDVIIGFQACCRGY R A G L K I 2 1 0 1 0 0 3 1 1 0 3 1 0 0 0 0 0 0 0 1 0 0 14 1 1578.8366 P35580;P35579 P35579 765 778 MYH10;MYH9 Myosin-10;Myosin-9 no no 3 0.046491 62.799 By MS/MS 2 0 1 1 500890 500890 0 711 824;825 735 1745 1455 1455 1 169420 0 AGVNTVTTLVENK AGKGDVPTKRPPVLRAGVNTVTTLVENKKA LRAGVNTVTTLVENKKAQLVVIAHDVDPIE R A G N K K 1 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 3 0 0 13 0 1344.7249 P62424 P62424 138 150 RPL7A 60S ribosomal protein L7a yes yes 2 3.3203E-33 303.33 By MS/MS By matching 8.33 0.471 2 1 2 1 18329000 18234000 94821 712 1160 736 1746;1747;1748 1456 1456 1 233060 127960 AGVNTVTTLVENKK AGKGDVPTKRPPVLRAGVNTVTTLVENKKA RAGVNTVTTLVENKKAQLVVIAHDVDPIEL R A G K K A 1 0 2 0 0 0 1 1 0 0 1 2 0 0 0 0 3 0 0 3 0 0 14 1 1472.8199 P62424 P62424 138 151 RPL7A 60S ribosomal protein L7a yes yes 2;3 2.4932E-07 222.18 By MS/MS 8 0 2 2 7429200 7429200 0 713 1160 737 1749;1750 1457;1458 1458 2 93792 0 AGVSFSGHR ______________________________ ______________________________ M A G H R L 1 1 0 0 0 0 0 2 1 0 0 0 0 1 0 2 0 0 0 1 0 0 9 0 916.45151 Q16643 Q16643 2 10 DBN1 Drebrin yes yes 2 0.049533 78.516 By MS/MS 4 0 1 1 899000 899000 0 714 1556 738 1751 1459 1459 1 84602 0 AGVSQVLNR ATGNWGDQKKAHQARAGVSQVLNRLTFAST KAHQARAGVSQVLNRLTFASTLSHLRRLNS R A G N R L 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 9 0 942.52468 P30876 P30876 464 472 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00023485 151.44 By MS/MS 3.5 0.5 1 1 2 1764600 1764600 0 715 781 739 1752;1753 1460 1460 1 75429 0 AGYIIPLQGPGLTTTESR VTLPAPLDTINVHLRAGYIIPLQGPGLTTT IIPLQGPGLTTTESRQQPMALAVALTKGGE R A G S R Q 1 1 0 0 0 1 1 3 0 2 2 0 0 0 2 1 3 0 1 0 0 0 18 0 1872.9945 P10253 P10253 820 837 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 0.00021822 142.39 By MS/MS 4 0 1 1 574830 574830 0 716 557 740 1754 1461 1461 1 54095 0 AGYPQYVSEILEK LMDRDLLQIIFSFSKAGYPQYVSEILEKVT SKAGYPQYVSEILEKVTCERRYIPDAMNLI K A G E K V 1 0 0 0 0 1 2 1 0 1 1 1 0 0 1 1 0 0 2 1 0 0 13 0 1495.7559 P42704 P42704 315 327 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00039042 142.97 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 2403700 2403700 0 717 886 741 1755;1756;1757;1758;1759;1760 1462;1463;1464 1462 1 91010 0 AGYSQQHQHR GGFPSGSVHSFSNGRAGYSQQHQHRHSGHE FSNGRAGYSQQHQHRHSGHEREEERGDGGF R A G H R H 1 1 0 0 0 3 0 1 2 0 0 0 0 0 0 1 0 0 1 0 0 0 10 0 1210.5592 Q8TBM8 Q8TBM8 223 232 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.00043834 134.48 By MS/MS 7 0 1 1 174260 174260 0 718 1984 742 1761 1465 1465 1 2735.5 0 AHAHLDTGR LVRWYQMGAYQPFFRAHAHLDTGRREPWLL YQPFFRAHAHLDTGRREPWLLPSQHNDIIR R A H G R R 2 1 0 1 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 976.48388 Q14697 Q14697 675 683 GANAB Neutral alpha-glucosidase AB yes yes 2;3 0.01244 107.15 By MS/MS 4 0 2 2 1130700 1130700 0 719 1454 743 1762;1763 1466;1467 1467 2 106410 0 AHATGAGPAGR TAVTQALNELLQHVKAHATGAGPAGRYDQA QHVKAHATGAGPAGRYDQATDTILTVTENI K A H G R Y 4 1 0 0 0 0 0 3 1 0 0 0 0 0 1 0 1 0 0 0 0 0 11 0 964.48388 Q9Y490 Q9Y490 787 797 TLN1 Talin-1 yes yes 2 0.00060704 129.42 By MS/MS 3 0.816 1 1 1 3 652630 652630 0 720 2888 744 1764;1765;1766 1468 1468 1 164280 0 AHEEANAAR KVEAHVRAQMAKRQKAHEEANAARKLTAEQ MAKRQKAHEEANAARKLTAEQRKVKKIKKL K A H A R K 4 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 967.44716 O43395 O43395 510 518 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.0044905 110.12 By MS/MS 4 0 1 1 93759 93759 0 721 206 745 1767 1469 1469 1 8823.4 0 AHEEDNTVELLR VAVLDGNVVGIVAARAHEEDNTVELLRMSV AARAHEEDNTVELLRMSVDSRFRGKGIAKA R A H L R M 1 1 1 1 0 0 3 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1424.6896 Q8N9F0 Q8N9F0 201 212 NAT8L N-acetylaspartate synthetase yes yes 2 0.0044627 105.13 By MS/MS 8 0 1 1 841920 841920 0 722 1934 746 1768 1470 1470 1 10629 0 AHEILPNLVCCSAK SVSEVIEGYEIACRKAHEILPNLVCCSAKN KAHEILPNLVCCSAKNLRDIDEVSSLLRTS K A H A K N 2 0 1 0 2 0 1 0 1 1 2 1 0 0 1 1 0 0 0 1 0 0 14 0 1610.7909 P50990 P50990 139 152 CCT8 T-complex protein 1 subunit theta yes yes 2 4.7397E-06 202 By MS/MS 6.5 0.5 1 1 2 6311500 6311500 0 723 984 747 1769;1770 1471 1471 1 49223 0 AHESVVK SLVGKRAISTSVCVRAHESVVKSEDFSLPA ISTSVCVRAHESVVKSEDFSLPAYMDRRDH R A H V K S 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 7 0 768.413 P13073 P13073 23 29 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.022145 110.63 By MS/MS 10 0 1 1 5648300 5648300 0 724 598 748 1771 1472 1472 1 304420 0 AHGDGPQHPDPDPCAR LLSGLRRRKRPLSWRAHGDGPQHPDPDPCA HGDGPQHPDPDPCARAGIHTSGSLSSRFSE R A H A R A 2 1 0 3 1 1 0 2 2 0 0 0 0 0 4 0 0 0 0 0 0 0 16 0 1725.7278 Q96CP6 Q96CP6 563 578 GRAMD1A GRAM domain-containing protein 1A yes yes 3 0.028474 73.415 By MS/MS 4 0 1 1 355190 355190 0 725 2123 749 1772 1473 1473 1 33426 0 AHGELHEQFK LRRFMYCTPFTLDGRAHGELHEQFKRKTIL TLDGRAHGELHEQFKRKTILTTSHAFPYIK R A H F K R 1 0 0 0 0 1 2 1 2 0 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1194.5782 Q96N67 Q96N67 1953 1962 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.00042981 133.23 By MS/MS 3 0.816 1 1 1 3 3424200 3424200 0 726 2201 750 1773;1774;1775 1474 1474 1 964690 0 AHGELHEQFKR LRRFMYCTPFTLDGRAHGELHEQFKRKTIL LDGRAHGELHEQFKRKTILTTSHAFPYIKT R A H K R K 1 1 0 0 0 1 2 1 2 0 1 1 0 1 0 0 0 0 0 0 0 0 11 1 1350.6793 Q96N67 Q96N67 1953 1963 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.00026673 133.75 By MS/MS 2 0 1 1 952600 952600 0 727 2201 751 1776 1475 1475 1 322210 0 AHGGYSVFAGVGER GKTVLIMELINNVAKAHGGYSVFAGVGERT KAHGGYSVFAGVGERTREGNDLYHEMIESG K A H E R T 2 1 0 0 0 0 1 4 1 0 0 0 0 1 0 1 0 0 1 2 0 0 14 0 1405.6739 P06576 P06576 226 239 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 2.3305E-05 196.16 By MS/MS By matching 6.86 0.833 3 2 2 6 1 78633000 78598000 34445 728 497 752 1777;1778;1779;1780;1781;1782;1783 1476;1477;1478;1479 1479 4 633030 35297 AHGNVQDR LEYKQSGESIDIITRAHGNVQDRIGRPSET SIDIITRAHGNVQDRIGRPSETGIIGIIDP R A H D R I 1 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 895.42603 Q16531 Q16531 104 111 DDB1 DNA damage-binding protein 1 yes yes 2 0.025838 93.162 By MS/MS 2.5 1.12 1 1 1 1 4 371960 371960 0 729 1549 753 1784;1785;1786;1787 1480;1481 1480 2 56919 0 AHGTHPAISTLAR FYFDLNSDSMKGLLRAHGTHPAISTLARSA LRAHGTHPAISTLARSAIFSVTYPSPDIFL R A H A R S 3 1 0 0 0 0 0 1 2 1 1 0 0 0 1 1 2 0 0 0 0 0 13 0 1330.7106 Q96HP0 Q96HP0 311 323 DOCK6 Dedicator of cytokinesis protein 6 yes yes 3 0.048181 66.989 By MS/MS 2 0 1 1 973700 973700 0 730 2166 754 1788 1482 1482 1 329340 0 AHHAAGQSVR RSRSDIDVNAAAGAKAHHAAGQSVRSGRLG AAGAKAHHAAGQSVRSGRLGAGALNAGSYA K A H V R S 3 1 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 10 0 1032.5213 O75122 O75122 382 391 CLASP2 CLIP-associating protein 2 yes yes 2 0.009544 95.358 By MS/MS 3 0 1 1 142250 142250 0 731 292 755 1789 1483 1483 1 2602.8 0 AHIAQLCEK ADAILGNQMFTHYDRAHIAQLCEKAGLLQR FTHYDRAHIAQLCEKAGLLQRALEHFTDLY R A H E K A 2 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1068.5386 Q00610;P53675 Q00610 611 619 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.00096326 134.48 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 3595300 3579700 15610 732 1262 756 1790;1791;1792;1793;1794;1795 1484;1485;1486 1484 3 438150 15610 AHLGTALK SHRRDQKWHDKQYKKAHLGTALKANPFGGA HDKQYKKAHLGTALKANPFGGASHAKGIVL K A H L K A 2 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 809.47594 P62266 P62266 30 37 RPS23 40S ribosomal protein S23 yes yes 2 0.0068542 116.9 By MS/MS By matching 9.33 0.471 2 1 2 1 22445000 22381000 63376 733 1148 757 1796;1797;1798 1487;1488 1487 2 808700 144520 AHPPELKK ______________________________ ______________________________ K A H K K F 1 0 0 0 0 0 1 0 1 0 1 2 0 0 2 0 0 0 0 0 0 0 8 1 918.5287 P62308;A8MWD9 P62308 4 11 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 3 0.05421 71.342 By MS/MS 10 0 1 1 60909 60909 0 734 30 758 1799 1489 1489 1 3282.8 0 AHPVFYQGTYSQALNDAK DIVSFMHSFEEKYGRAHPVFYQGTYSQALN VFYQGTYSQALNDAKRELRFLLVYLHGDDH R A H A K R 3 0 1 1 0 2 0 1 1 0 1 1 0 1 1 1 1 0 2 1 0 0 18 0 2008.9643 Q96CS3 Q96CS3 150 167 FAF2 FAS-associated factor 2 yes yes 3 0.00027326 153.48 By MS/MS 6.5 0.5 1 1 2 11391000 11391000 0 735 2126 759 1800;1801 1490 1490 1 84825 0 AHQLVHEGYK TNEFVHINNLKLICRAHQLVHEGYKFMFDE KLICRAHQLVHEGYKFMFDEKLVTVWSAPN R A H Y K F 1 0 0 0 0 1 1 1 2 0 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1180.5989 O00743 O00743 236 245 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 3 0.007657 120.45 By MS/MS 8 0 1 1 558570 558570 0 736 117 760 1802 1491 1491 1 7051.9 0 AHQSYCHSNK FSGFESCSNGVISNKAHQSYCHSNKHQSSN VISNKAHQSYCHSNKHQSSNLNVPELNSIN K A H N K H 1 0 1 0 1 1 0 0 2 0 0 1 0 0 0 2 0 0 1 0 0 0 10 0 1230.52 Q96S59 Q96S59 522 531 RANBP9 Ran-binding protein 9 yes yes 2 0.00061223 131.12 By MS/MS 4 0 1 1 91734 91734 0 737 2232 761 1803 1492 1492 1 8632.8 0 AHQVVEDGYEFFAK VAKFLHKHDLDLICRAHQVVEDGYEFFAKR RAHQVVEDGYEFFAKRQLVTLFSAPNYCGE R A H A K R 2 0 0 1 0 1 2 1 1 0 0 1 0 2 0 0 0 0 1 2 0 0 14 0 1638.7678 P36873;P62136;P62140 P62136 247 260 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 0.00040819 150.51 By MS/MS 7.5 0.5 1 1 2 1771300 1771300 0 738 1139;840;1140 762 1804;1805 1493 1493 1 24069 0 AHSGAQGLLAAQK GTLNLSVLLPLGLRKAHSGAQGLLAAQKAR RKAHSGAQGLLAAQKARGLFKDFFPETGTK K A H Q K A 4 0 0 0 0 2 0 2 1 0 2 1 0 0 0 1 0 0 0 0 0 0 13 0 1250.6731 Q9Y2Z4 Q9Y2Z4 31 43 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2;3 0.00067105 163.9 By MS/MS 7 0 2 2 3053100 3053100 0 739 2852 763 1806;1807 1494;1495 1494 2 47927 0 AHSSHLK ELKDAQAGKEPGGSRAHSSHLKSKKGQSTS GKEPGGSRAHSSHLKSKKGQSTSRHKKLMF R A H L K S 1 0 0 0 0 0 0 0 2 0 1 1 0 0 0 2 0 0 0 0 0 0 7 0 778.40859 P04637 P04637 364 370 TP53 Cellular tumor antigen p53 yes yes 2 0.012706 128.38 By MS/MS 6 0 1 1 993670 993670 0 740 476 764 1808 1496 1496 1 6830.7 0 AHSSMVGVNLPQK LGDVYVNDAFGTAHRAHSSMVGVNLPQKAG HRAHSSMVGVNLPQKAGGFLMKKELNYFAK R A H Q K A 1 0 1 0 0 1 0 1 1 0 1 1 1 0 1 2 0 0 0 2 0 0 13 0 1366.7027 P00558 P00558 172 184 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.0058381 94.538 By MS/MS 7 0 1 1 325020 325020 0 741 447 765 1809 1497 1497 169 1 5102.2 0 AHTPQVHK PYWEKDIIKMLGLEKAHTPQVHKNIPSVNA KMLGLEKAHTPQVHKNIPSVNAKLKVVKHL K A H H K N 1 0 0 0 0 1 0 0 2 0 0 1 0 0 1 0 1 0 0 1 0 0 8 0 916.4879 Q8TCC3 Q8TCC3 94 101 MRPL30 39S ribosomal protein L30, mitochondrial yes yes 2;3 0.0073252 135.77 By MS/MS 10 0 2 2 1279400 1279400 0 742 1989 766 1810;1811 1498;1499 1498 2 68955 0 AHTVLAASCAR HLTRCGVLGALRELRAHTVLAASCARHRRS RELRAHTVLAASCARHRRSLRLLEPFEVRT R A H A R H 4 1 0 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1155.5819 Q8WUY1 Q8WUY1 96 106 THEM6 Protein THEM6 yes yes 2 8.8485E-07 192.26 By MS/MS 9 0 1 1 1517700 1517700 0 743 2019 767 1812 1500 1500 1 29868 0 AHVVPCFDASK NILFADTHIPGSPFKAHVVPCFDASKVKCS SPFKAHVVPCFDASKVKCSGPGLERATAGE K A H S K V 2 0 0 1 1 0 0 0 1 0 0 1 0 1 1 1 0 0 0 2 0 0 11 0 1229.5863 P21333 P21333 1152 1162 FLNA Filamin-A yes yes 2 0.0086361 94.309 By MS/MS 1.5 0.5 1 1 2 1118500 1118500 0 744 677 768 1813;1814 1501;1502 1502 2 350710 0 AHWTPFEGQK LEHEWTIPSHMPFSKAHWTPFEGQKVKGTV MPFSKAHWTPFEGQKVKGTVRRVVLRGEVA K A H Q K V 1 0 0 0 0 1 1 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 10 0 1199.5724 P27708 P27708 1769 1778 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.047238 73.665 By MS/MS 1.5 0.5 1 1 2 466420 466420 0 745 745 769 1815;1816 1503 1503 1 150260 0 AIACLLFGGSR KSIAPSIFGGTDMKKAIACLLFGGSRKRLP DMKKAIACLLFGGSRKRLPDGLTRRGDINL K A I S R K 2 1 0 0 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1163.6121 P33992 P33992 352 362 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0041213 120.99 By MS/MS 4 0 1 1 0 0 0 746 807 770 1817 1504 1504 1 0 0 AIACVVTACSAELEK GLAGRTWAGKEELLKAIACVVTACSAELEK AIACVVTACSAELEKSVPNQPSTNEILQAV K A I E K S 4 0 0 0 2 0 2 0 0 1 1 1 0 0 0 1 1 0 0 2 0 0 15 0 1620.7851 Q5VYK3 Q5VYK3 1591 1605 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 2.32E-16 289.59 By MS/MS 2 0 1 1 1514300 1514300 0 747 1656 771 1818 1505 1505 1 512200 0 AIADTGANVVVTGGK NFSKGEENLMDAQVKAIADTGANVVVTGGK AIADTGANVVVTGGKVADMALHYANKYNIM K A I G K V 3 0 1 1 0 0 0 3 0 1 0 1 0 0 0 0 2 0 0 3 0 0 15 0 1371.7358 P50990 P50990 282 296 CCT8 T-complex protein 1 subunit theta yes yes 2 2.6789E-05 201.09 By MS/MS By MS/MS 4.78 2.2 1 1 1 2 2 1 1 7 2 226260000 225870000 394130 748 984 772 1819;1820;1821;1822;1823;1824;1825;1826;1827 1506;1507;1508;1509;1510;1511;1512;1513 1512 8 1989200 398790 AIAELGIYPAVDPLDSTSR ATTFAHLDATTVLSRAIAELGIYPAVDPLD LGIYPAVDPLDSTSRIMDPNIVGSEHYDVA R A I S R I 3 1 0 2 0 0 1 1 0 2 2 0 0 0 2 2 1 0 1 1 0 0 19 0 1987.0262 P06576 P06576 388 406 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 2.262E-07 206.49 By MS/MS By matching 7 1.35 6 2 1 1 1 10 1 290710000 289960000 755120 749 497 773 1828;1829;1830;1831;1832;1833;1834;1835;1836;1837;1838 1514;1515;1516;1517;1518;1519;1520;1521;1522;1523;1524;1525;1526;1527;1528;1529 1515 16 2067100 773780 AIAFLQQPR IKFEGAIYRKDVGFRAIAFLQQPRSLTYKE KDVGFRAIAFLQQPRSLTYKESGVDIAAGN R A I P R S 2 1 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1042.5924 P22102 P22102 425 433 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00039101 145.04 By MS/MS 5 0.816 1 1 1 3 4097000 4097000 0 750 688 774 1839;1840;1841 1530 1530 1 290920 0 AIAGNDDVKDAIVR SGVQELVKQVLSTLRAIAGNDDVKDAIVRA RAIAGNDDVKDAIVRAGGTESIVAAMTQHL R A I V R A 3 1 1 3 0 0 0 1 0 2 0 1 0 0 0 0 0 0 0 2 0 0 14 1 1455.7682 Q6NXE6 Q6NXE6 353 366 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 0.039139 87.831 By MS/MS 6.5 0.5 1 1 2 3847700 3847700 0 751 1692 775 1842;1843 1531 1531 1 48999 0 AIAHYEQSADYYKGEESNSSANK SIAEIYETELVDIEKAIAHYEQSADYYKGE ADYYKGEESNSSANKCLLKVAGYAALLEQY K A I N K C 4 0 2 1 0 1 3 1 1 1 0 2 0 0 0 4 0 0 3 0 0 0 23 1 2561.1306 P54920;Q9H115 P54920 141 163 NAPA;NAPB Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein yes no 3 2.334E-07 149.44 By MS/MS 8 0 1 1 1018300 1018300 0 752 1049 776 1844 1532 1532 1 12856 0 AIAINTFLPK KTFQGKPIKARIKAKAIAINTFLPKNGFRP RIKAKAIAINTFLPKNGFRPLDVSLYAQQR K A I P K N 2 0 1 0 0 0 0 0 0 2 1 1 0 1 1 0 1 0 0 0 0 0 10 0 1086.6437 Q92615 Q92615 312 321 LARP4B La-related protein 4B yes yes 2 0.0010212 123.21 By MS/MS 4.5 0.5 1 1 2 609550 609550 0 753 2063 777 1845;1846 1533 1533 1 43581 0 AIANECQANFISIK LFYGPPGCGKTLLAKAIANECQANFISIKG KAIANECQANFISIKGPELLTMWFGESEAN K A I I K G 3 0 2 0 1 1 1 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 14 0 1577.7872 P55072 P55072 530 543 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.4287E-16 255.41 By MS/MS 5.5 1.12 1 1 1 1 4 14347000 14347000 0 754 1054 778 1847;1848;1849;1850 1534;1535 1534 2 1093300 0 AIAYLFPSGLFEK MGEDPETFTQEDIDRAIAYLFPSGLFEKRA DRAIAYLFPSGLFEKRARPVMKHPEQIFPR R A I E K R 2 0 0 0 0 0 1 1 0 1 2 1 0 2 1 1 0 0 1 0 0 0 13 0 1454.781 P82933 P82933 107 119 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.025653 83.862 By MS/MS 7 0 1 1 50979 50979 0 755 1239 779 1851 1536;1537 1536 2 800.28 0 AICTEAGLMALR DLIMAKDDLSGADIKAICTEAGLMALRERR DIKAICTEAGLMALRERRMKVTNEDFKKSK K A I L R E 3 1 0 0 1 0 1 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 12 0 1304.6581 P62191 P62191 397 408 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0022741 126.31 By MS/MS 6 0 1 1 1297000 1297000 0 756 1141 780 1852 1538 1538 1 8915.8 0 AIDENNEPTACFLIR WGPGPGGCLQTLLHRAIDENNEPTACFLIR AIDENNEPTACFLIRSGCDVNSPRQPGANG R A I I R S 2 1 2 1 1 0 2 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 15 0 1761.8356 Q9P2R3 Q9P2R3 732 746 ANKFY1 Rabankyrin-5 yes yes 2 2.1305E-16 251.75 By MS/MS By matching 4.2 1.17 2 1 1 1 4 1 2224200 2151700 72438 757 2689 781 1853;1854;1855;1856;1857 1539;1540;1541 1539 3 92477 9220.4 AIDLFTDAIK KVAAIEALNDGELQKAIDLFTDAIKLNPRL GELQKAIDLFTDAIKLNPRLAILYAKRASV K A I I K L 2 0 0 2 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1105.6019 Q8IZP2;P50502;Q8NFI4 Q8IZP2 129 138 ST13P4;ST13;ST13P5 Putative protein FAM10A4;Hsc70-interacting protein;Putative protein FAM10A5 yes no 2 0.00026194 142.92 By MS/MS 6 0 1 1 2118000 2118000 0 758 976 782 1858 1542 1542 1 14560 0 AIDLFTDAIKLNPR KVAAIEALNDGELQKAIDLFTDAIKLNPRL KAIDLFTDAIKLNPRLAILYAKRASVFVKL K A I P R L 2 1 1 2 0 0 0 0 0 2 2 1 0 1 1 0 1 0 0 0 0 0 14 1 1585.8828 Q8IZP2;P50502;Q8NFI4 Q8IZP2 129 142 ST13P4;ST13;ST13P5 Putative protein FAM10A4;Hsc70-interacting protein;Putative protein FAM10A5 yes no 3 0.026248 71.241 By MS/MS 6 0 1 1 1115400 1115400 0 759 976 783 1859 1543 1543 1 7667.7 0 AIDNAADLLIFGK SFHKLRDRAERIASRAIDNAADLLIFGKEL SRAIDNAADLLIFGKELSAIGSDTTPLPSW R A I G K E 3 0 1 2 0 0 0 1 0 2 2 1 0 1 0 0 0 0 0 0 0 0 13 0 1359.7398 Q9Y5X2 Q9Y5X2 246 258 SNX8 Sorting nexin-8 yes yes 2 2.5476E-05 185.3 By MS/MS 6 0 1 1 784990 784990 0 760 2926 784 1860 1544 1544 1 5396.2 0 AIDSSNLKDDYSTAQR YFKINKLHLCKPLIRAIDSSNLKDDYSTAQ IDSSNLKDDYSTAQRVTYKYYVGRKAMFDS R A I Q R V 2 1 1 3 0 1 0 0 0 1 1 1 0 0 0 3 1 0 1 0 0 0 16 1 1782.8384 Q5JVF3 Q5JVF3 194 209 PCID2 PCI domain-containing protein 2 yes yes 3 0.00017473 136.39 By MS/MS 7 0 1 1 782220 782220 0 761 1614 785 1861 1545;1546 1545 2 12279 0 AIDTTQLFSLPK GLVPKEGALDLSGLRAIDTTQLFSLPKDFW GLRAIDTTQLFSLPKDFWEQEVRDIRSYLT R A I P K D 1 0 0 1 0 1 0 0 0 1 2 1 0 1 1 1 2 0 0 0 0 0 12 0 1332.7289 Q16822 Q16822 589 600 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.00016696 152.64 By MS/MS 5.5 0.5 1 1 2 1361200 1361200 0 762 1560 786 1862;1863 1547 1547 1 12400 0 AIEEGIPAFTCEEYVK LQVIFITNDRRNKEKAIEEGIPAFTCEEYV IEEGIPAFTCEEYVKSLTANPELIDRLACL K A I V K S 2 0 0 0 1 0 4 1 0 2 0 1 0 1 1 0 1 0 1 1 0 0 16 0 1854.871 Q9Y2L1 Q9Y2L1 184 199 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.00036087 142.12 By MS/MS 5 0.816 1 1 1 3 4524500 4524500 0 763 2834 787 1864;1865;1866 1548 1548 1 313590 0 AIEEGTLEEIEEEVR EVDYSDSLTEKQWLKAIEEGTLEEIEEEVR AIEEGTLEEIEEEVRQKKSSRKRKRDSDAG K A I V R Q 1 1 0 0 0 0 7 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 15 0 1744.8367 P51532 P51532 1391 1405 SMARCA4 Transcription activator BRG1 yes yes 2 0.00025606 198.97 By MS/MS 2 0 1 1 75291 75291 0 764 995 788 1867 1549 1549 1 25466 0 AIEFLNNPPEEAPR GFAFVEFETKEQAAKAIEFLNNPPEEAPRK KAIEFLNNPPEEAPRKPGIFPKTVKNKPIP K A I P R K 2 1 2 0 0 0 3 0 0 1 1 0 0 1 3 0 0 0 0 0 0 0 14 0 1595.7944 Q4G0J3 Q4G0J3 182 195 LARP7 La-related protein 7 yes yes 2 6.5103E-05 178.1 By MS/MS 5 0 1 1 625540 625540 0 765 1582 789 1868 1550 1550 1 6273.8 0 AIEINPDSAQPYK VKLQKPNAAIRDCDRAIEINPDSAQPYKRR DRAIEINPDSAQPYKRRGKAHRLLGHWEEA R A I Y K R 2 0 1 1 0 1 1 0 0 2 0 1 0 0 2 1 0 0 1 0 0 0 13 0 1444.7198 Q8IZP2;P50502;Q8NFI4 Q8IZP2 170 182 ST13P4;ST13;ST13P5 Putative protein FAM10A4;Hsc70-interacting protein;Putative protein FAM10A5 yes no 2 0.024264 82.489 By MS/MS 6 0 1 1 1739700 1739700 0 766 976 790 1869 1551 1551 1 11959 0 AIELLQEFSDQHPENAAEIK LIQAAQLCREKQHTKAIELLQEFSDQHPEN QEFSDQHPENAAEIKLTMAQLKISQGNISK K A I I K L 3 0 1 1 0 2 4 0 1 2 2 1 0 1 1 1 0 0 0 0 0 0 20 0 2281.1226 O76094 O76094 357 376 SRP72 Signal recognition particle subunit SRP72 yes yes 3 1.8523E-05 127.78 By MS/MS 5.5 0.5 1 1 2 1969900 1969900 0 767 362 791 1870;1871 1552 1552 1 16436 0 AIEPQKEEADENYNSVNTR DEIKQLGREIRLQLKAIEPQKEEADENYNS QKEEADENYNSVNTRMRKTQHGVLSQQFVE K A I T R M 2 1 3 1 0 1 4 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 19 1 2206.0138 Q12846 Q12846 103 121 STX4 Syntaxin-4 yes yes 3 6.9501E-05 170.16 By MS/MS 7 0 1 1 503430 503430 0 768 1333 792 1872 1553 1553 1 7902.9 0 AIEQADLLQEEAETPR LGGEVQETSKKNVLKAIEQADLLQEEAETP IEQADLLQEEAETPRSVLEEIGLT______ K A I P R S 3 1 0 1 0 2 4 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 16 0 1811.8901 P56377 P56377 133 148 AP1S2 AP-1 complex subunit sigma-2 yes yes 2 3.2579E-24 284.91 By MS/MS 9 0 1 1 585070 585070 0 769 1069 793 1873 1554 1554 1 11514 0 AIESNQSSVDLK SLKLILEKKLAILERAIESNQSSVDLKLAK LERAIESNQSSVDLKLAKLKLCTEFWEPST R A I L K L 1 0 1 1 0 1 1 0 0 1 1 1 0 0 0 3 0 0 0 1 0 0 12 0 1289.6463 Q9H7Z3 Q9H7Z3 373 384 NRDE2 Protein NRDE2 homolog yes yes 2 0.00037378 139.15 By MS/MS 3 0 1 1 114540 114540 0 770 2468 794 1874 1555 1555 1 2095.8 0 AIETALDCLK EFSDCKASLQLPMEKAIETALDCLKSANTE LPMEKAIETALDCLKSANTEPYYRRQAWEV K A I L K S 2 0 0 1 1 0 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1132.5798 Q9Y4A5 Q9Y4A5 942 951 TRRAP Transformation/transcription domain-associated protein yes yes 2 0.00042349 134.77 By MS/MS 1.5 0.5 1 1 2 274110 274110 0 771 2890 795 1875;1876 1556;1557 1556 2 75787 0 AIETTDIISR LGLKFNKIVHSSMTRAIETTDIISRHLPGV SSMTRAIETTDIISRHLPGVCKVSTDLLRE R A I S R H 1 1 0 1 0 0 1 0 0 3 0 0 0 0 0 1 2 0 0 0 0 0 10 0 1117.5979 Q96HS1 Q96HS1 153 162 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.00011302 153.05 By MS/MS By MS/MS 8.33 0.943 1 3 1 1 5 1 79224000 78896000 327330 772 2168 796 1877;1878;1879;1880;1881;1882 1558;1559;1560;1561;1562;1563 1562 6 1087500 441710 AIFLAAQK KDLSSEELAAFQKERAIFLAAQKEADLAAQ AAFQKERAIFLAAQKEADLAAQEEAAKK__ R A I Q K E 3 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 860.51199 Q9Y3B7 Q9Y3B7 172 179 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0066152 118.01 By MS/MS By matching 9 0 2 1 1 3923400 3869400 54077 773 2866 797 1883;1884 1564 1564 1 76149 123310 AIFLAAQKEADLAAQEEAAK KDLSSEELAAFQKERAIFLAAQKEADLAAQ AQKEADLAAQEEAAKK______________ R A I A K K 8 0 0 1 0 2 3 0 0 1 2 2 0 1 0 0 0 0 0 0 0 0 20 1 2087.0899 Q9Y3B7 Q9Y3B7 172 191 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 6.1153E-05 112.82 By MS/MS 9 0 1 1 220390 220390 0 774 2866 798 1885 1565 1565 1 4337.4 0 AIFLAAQKEADLAAQEEAAKK KDLSSEELAAFQKERAIFLAAQKEADLAAQ QKEADLAAQEEAAKK_______________ R A I K K - 8 0 0 1 0 2 3 0 0 1 2 3 0 1 0 0 0 0 0 0 0 0 21 2 2215.1848 Q9Y3B7 Q9Y3B7 172 192 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 1.0381E-08 213.64 By MS/MS 9 0 1 1 1708500 1708500 0 775 2866 799 1886 1566 1566 1 33623 0 AIFQQPPVGVR LILPVHSNIPMMDQKAIFQQPPVGVRKIVL MDQKAIFQQPPVGVRKIVLATNIAETSITI K A I V R K 1 1 0 0 0 2 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 11 0 1210.6822 Q7L2E3 Q7L2E3 715 725 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0002783 136.27 By MS/MS 4 0.816 1 1 1 3 4568800 4568800 0 776 1761 800 1887;1888;1889 1567;1568 1567 2 153050 0 AIFQTIQNR IDDEDNPVDEYQIFKAIFQTIQNRNPVWYQ EYQIFKAIFQTIQNRNPVWYQALTHGLNEE K A I N R N 1 1 1 0 0 2 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1089.5931 O95373 O95373 964 972 IPO7 Importin-7 yes yes 2 3.524E-07 194.9 By MS/MS 3.5 1.12 1 1 1 1 4 2600900 2600900 0 777 406 801 1890;1891;1892;1893 1569 1569 1 122030 0 AIFTGYYGK NGRWMLTLAKNMEVRAIFTGYYGKGKPVPT KNMEVRAIFTGYYGKGKPVPTQGSRKGGAL R A I G K G 1 0 0 0 0 0 0 2 0 1 0 1 0 1 0 0 1 0 2 0 0 0 9 0 1018.5124 P09543 P09543 392 400 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.052085 75.043 By MS/MS 7 0 1 1 2529100 2529100 0 778 537 802 1894 1570 1570 1 39702 0 AIGDGEDEMLFTR GWLRRSRFEQFCHLRAIGDGEDEMLFTRRF LRAIGDGEDEMLFTRRFVTPSEPVAHSRRG R A I T R R 1 1 0 2 0 0 2 2 0 1 1 0 1 1 0 0 1 0 0 0 0 0 13 0 1452.6555 O14654 O14654 385 397 IRS4 Insulin receptor substrate 4 yes yes 2 0.00015481 167.12 By MS/MS 2.25 0.829 1 1 2 4 528870 528870 0 779 129 803;804 1895;1896;1897;1898 1571;1572 1571 76 2 37537 0 AIGGGLSSVGGGSSTIK SGLGIGGGFSSSSGRAIGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A I I K Y 1 0 0 0 0 0 0 6 0 2 1 1 0 0 0 4 1 0 0 1 0 0 17 0 1446.7678 CON__P02538;P02538;CON__P48668;P48668 CON__P48668 534 550 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 3.0039E-24 246.63 By MS/MS By MS/MS 5.25 2.74 1 1 2 2 2 1 1 1 1 5 7 19123000 7990900 11132000 + 780 56;40 805 1899;1900;1901;1902;1903;1904;1905;1906;1907;1908;1909;1910 1573;1574;1575;1576;1577;1578;1579;1580;1581;1582 1574 10 236050 12233000 AIGNIELGIR LVVVGEIVTEEHLRRAIGNIELGIRSWDTN EHLRRAIGNIELGIRSWDTNLIECNLDQEL R A I I R S 1 1 1 0 0 0 1 2 0 3 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1054.6135 P46821 P46821 55 64 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00011302 153.05 By MS/MS 1 0 1 1 111640 111640 0 781 921 806 1911 1583 1583 1 26903 0 AIGNNSATSPR SMGPAFIHHHPPKSRAIGNNSATSPRVVVT PKSRAIGNNSATSPRVVVTQPNTKYTFKIT R A I P R V 2 1 2 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1086.5418 Q9NYJ8 Q9NYJ8 442 452 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 0.013109 84.31 By MS/MS 5 0 1 1 1117700 1117700 0 782 2634 807 1912 1584 1584 0 11210 0 AIGNTELENK RRLEELLRQMCQAAKAIGNTELENKFAEGI CQAAKAIGNTELENKFAEGITKIKRDIVFA K A I N K F 1 0 2 0 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1087.551 P42285 P42285 1013 1022 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.021977 85.862 By MS/MS 4 0 1 1 471180 471180 0 783 878 808 1913 1585 1585 1 44341 0 AIGSASEGAQSSLQEVYHK FHMDPSGTFVQCDARAIGSASEGAQSSLQE ASEGAQSSLQEVYHKSMTLKEAIKSSLIIL R A I H K S 3 0 0 0 0 2 2 2 1 1 1 1 0 0 0 4 0 0 1 1 0 0 19 0 1960.949 P28066 P28066 169 187 PSMA5 Proteasome subunit alpha type-5 yes yes 3 0.031059 66.022 By MS/MS 8 0 1 1 11056000 11056000 0 784 748 809 1914 1586 1586 1 139580 0 AIGTAYAVLSNPEKR HPDKNHAPGATEAFKAIGTAYAVLSNPEKR AIGTAYAVLSNPEKRKQYDQFGDDKSQAAR K A I K R K 3 1 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 0 1 1 0 0 15 1 1588.8573 Q9NXW2 Q9NXW2 153 167 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.001974 132.14 By MS/MS 7 0 1 1 1173900 1173900 0 785 2630 810 1915 1587 1587 1 18427 0 AIGTDEDLAHSSIR SACTSASLEPSYVLRAIGTDEDLAHSSIRF RAIGTDEDLAHSSIRFGIGRFTTEEEVDYT R A I I R F 2 1 0 2 0 0 1 1 1 2 1 0 0 0 0 2 1 0 0 0 0 0 14 0 1483.7267 Q9Y697 Q9Y697 394 407 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 0.00022738 139.76 By MS/MS 7 0 1 1 1140900 1140900 0 786 2935 811 1916 1588 1588 1 17910 0 AIHDKDYVK TNLGYKVLIQPSNRRAIHDKDYVKAGGILQ QPSNRRAIHDKDYVKAGGILQEDISEACLI R A I V K A 1 0 0 2 0 0 0 0 1 1 0 2 0 0 0 0 0 0 1 1 0 0 9 1 1087.5662 Q9UDR5 Q9UDR5 66 74 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 3 0.037073 89.886 By MS/MS 4 0 1 1 406080 406080 0 787 2710 812 1917 1589 1589 1 38215 0 AIHSWLTR IDEELLGDGHSYSPRAIHSWLTRAMYSRRS GHSYSPRAIHSWLTRAMYSRRSKMNPLWNT R A I T R A 1 1 0 0 0 0 0 0 1 1 1 0 0 0 0 1 1 1 0 0 0 0 8 0 982.53485 P28070 P28070 132 139 PSMB4 Proteasome subunit beta type-4 yes yes 2 0.021009 98.523 By MS/MS 8.5 0.5 1 1 2 949410 949410 0 788 749 813 1918;1919 1590 1590 1 13641 0 AIIDEFEQK SVVGKLRRGAKPEGKAIIDEFEQKLRACHT AKPEGKAIIDEFEQKLRACHTRGLDGIKEL K A I Q K L 1 0 0 1 0 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 9 0 1091.5499 Q15021 Q15021 1280 1288 NCAPD2 Condensin complex subunit 1 yes yes 2 0.00029391 153.04 By MS/MS 4 0.816 1 1 1 3 1456600 1456600 0 789 1474 814 1920;1921;1922 1591 1591 1 49187 0 AIIEEGDKEIATK HPSMAIIKGAGLVMKAIIEEGDKEIATKMQ MKAIIEEGDKEIATKMQELALSEGALPRHL K A I T K M 2 0 0 1 0 0 3 1 0 3 0 2 0 0 0 0 1 0 0 0 0 0 13 1 1415.7508 O75165 O75165 587 599 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00051757 173.04 By MS/MS 2 0 1 1 544300 544300 0 790 302 815 1923 1592 1592 1 184110 0 AIIEEYLHLNDMK LKAALSEEELEKKSKAIIEEYLHLNDMKEA SKAIIEEYLHLNDMKEAVQCVQELASPSLL K A I M K E 1 0 1 1 0 0 2 0 1 2 2 1 1 0 0 0 0 0 1 0 0 0 13 0 1587.7967 Q04637 Q04637 1248 1260 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 2.1926E-05 187.31 By MS/MS 2 0 2 2 1227500 1227500 0 791 1291 816;817 1924;1925 1593;1594 1593 767 2 415180 0 AIIIFVPVPQLK NITAAKEIEVGGGRKAIIIFVPVPQLKSFQ GRKAIIIFVPVPQLKSFQKIQVRLVRELEK K A I L K S 1 0 0 0 0 1 0 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 12 0 1336.8482 P62081 P62081 59 70 RPS7 40S ribosomal protein S7 yes yes 2 0.00033949 141.39 By MS/MS 9 0 1 1 314670 314670 0 792 1138 818 1926 1595;1596 1595 2 6192.7 0 AIILAAAPGEK VLQAGQYGVAQTRRRAIILAAAPGEKLPLF TRRRAIILAAAPGEKLPLFPEPLHVFAPRA R A I E K L 4 0 0 0 0 0 1 1 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1052.623 P26358 P26358 1313 1323 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.052137 68.846 By MS/MS 3 0.816 1 1 1 3 639650 639650 0 793 730 819 1927;1928;1929 1597 1597 1 128420 0 AIITALGVER TASEDDNFGTAQSNKAIITALGVERRNRVL AQSNKAIITALGVERRNRVLAGLYMGRSDT K A I E R R 2 1 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1041.6182 Q92616 Q92616 1872 1881 GCN1L1 Translational activator GCN1 yes yes 2 0.00019902 147.2 By MS/MS 2.5 1.12 1 1 1 1 4 4925500 4925500 0 794 2064 820 1930;1931;1932;1933 1598;1599;1600;1601 1599 4 1179500 0 AIITALGVERR TASEDDNFGTAQSNKAIITALGVERRNRVL QSNKAIITALGVERRNRVLAGLYMGRSDTQ K A I R R N 2 2 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 11 1 1197.7194 Q92616 Q92616 1872 1882 GCN1L1 Translational activator GCN1 yes yes 2;3 0.0032319 120.99 By MS/MS 2.8 0.748 2 2 1 5 3473200 3473200 0 795 2064 821 1934;1935;1936;1937;1938 1602;1603 1602 2 990310 0 AIKEKEYEIER CEKENLGWQKLESEKAIKEKEYEIERLRVL ESEKAIKEKEYEIERLRVLLQEEGTRKREY K A I E R L 1 1 0 0 0 0 4 0 0 2 0 2 0 0 0 0 0 0 1 0 0 0 11 2 1406.7405 P15924 P15924 1163 1173 DSP Desmoplakin yes yes 3 0.012912 107.34 By MS/MS By MS/MS 2.33 1.11 2 1 2 1 4 2 4460100 2520600 1939500 796 628 822 1939;1940;1941;1942;1943;1944 1604;1605 1605 2 460870 297570 AIKNDSVVAGGGAIEMELSK ETERSLHDAIMIVRRAIKNDSVVAGGGAIE SVVAGGGAIEMELSKYLRDYSRTIPGKQQL R A I S K Y 3 0 1 1 0 0 2 3 0 2 1 2 1 0 0 2 0 0 0 2 0 0 20 1 1988.0248 Q99832 Q99832 399 418 CCT7 T-complex protein 1 subunit eta yes yes 2;3 7.0874E-05 157.57 By MS/MS 6 0 2 2 4358100 4358100 0 797 2270 823 1945;1946 1606;1607 1607 2 29958 0 AILAGAQPIEEMR PITSPIENIIAIYEKAILAGAQPIEEMRHT EKAILAGAQPIEEMRHTIVDILTMKSQEKA K A I M R H 3 1 0 0 0 1 2 1 0 2 1 0 1 0 1 0 0 0 0 0 0 0 13 0 1397.7337 Q8WWK9 Q8WWK9 487 499 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.0064338 99.343 By MS/MS 4.5 0.5 1 1 2 1332000 1332000 0 798 2035 824 1947;1948 1608 1608 1 85342 0 AILCAIQNLEER GFVEDFSEQMEIAIRAILCAIQNLEERKNE AIRAILCAIQNLEERKNEKAEENTDQASPQ R A I E R K 2 1 1 0 1 1 2 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1428.7395 Q9NU22 Q9NU22 4514 4525 MDN1 Midasin yes yes 2 4.908E-06 187.99 By MS/MS 1.5 0.5 1 1 2 370830 370830 0 799 2580 825 1949;1950 1609;1610 1609 2 101100 0 AILFAVVAR ______________________________ ______________________________ M A I A R G 3 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 958.59639 P51809 P51809 2 10 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.00035457 151.17 By MS/MS 9 0 1 1 397860 397860 0 800 1007 826 1951 1611;1612 1612 2 7829.9 0 AILILDNDGDR ______________________________ YTVKAILILDNDGDRLFAKYYDDTYPSVKE K A I D R L 1 1 1 3 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1213.6303 P61923 P61923 15 25 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.0061722 100.82 By MS/MS 9 0 1 1 686460 686460 0 801 1131 827 1952 1613 1613 1 13510 0 AILILDNDGDRLFAK ______________________________ AILILDNDGDRLFAKYYDDTYPSVKEQKAF K A I A K Y 2 1 1 3 0 0 0 1 0 2 3 1 0 1 0 0 0 0 0 0 0 0 15 1 1672.9148 P61923 P61923 15 29 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.0002688 191.79 By MS/MS 9.33 0.471 2 1 3 974970 974970 0 802 1131 828 1953;1954;1955 1614;1615;1616;1617 1614 4 22513 0 AILNGIDSINK DLEKKQQLLRAATGKAILNGIDSINKVLDH ATGKAILNGIDSINKVLDHFRRKGINQHVQ K A I N K V 1 0 2 1 0 0 0 1 0 3 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1156.6452 Q9UQE7 Q9UQE7 504 514 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0024955 110.53 By MS/MS 3 0 1 1 327280 327280 0 803 2807 829 1956 1618 1618 1 5988.3 0 AILPCIKGYDVIAQAQSGTGK IYAYGFEKPSAIQQRAILPCIKGYDVIAQA KGYDVIAQAQSGTGKTATFAISILQQIELD R A I G K T 3 0 0 1 1 2 0 3 0 3 1 2 0 0 1 1 1 0 1 1 0 0 21 1 2189.1514 P60842 P60842 62 82 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 4.5817E-05 175.26 By MS/MS 6.33 0.471 2 1 3 5684100 5684100 0 804 1097 830 1957;1958;1959 1619;1620 1620 2 41500 0 AILQATLREEK IIEYLKQQVSLLKEKAILQATLREEKKLRV LKEKAILQATLREEKKLRVENAKLKKEIEE K A I E K K 2 1 0 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 1 1270.7245 Q12904 Q12904 36 46 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 5.6847E-06 188.91 By MS/MS 7.5 0.5 1 1 2 9363700 9363700 0 805 1337 831 1960;1961 1621 1621 1 144330 0 AILVDLEPGTMDSVR SVYYNEATGGKYVPRAILVDLEPGTMDSVR AILVDLEPGTMDSVRSGPFGQIFRPDNFVF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 P07437;Q13509;Q13885;Q9BVA1 P07437 63 77 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2;3 6.9134E-12 246.56 By MS/MS By MS/MS 6.03 2.54 2 2 2 1 1 9 4 3 2 3 25 4 436250000 435420000 836650 806 509;1412;2331;1393 832;833 1962;1963;1964;1965;1966;1967;1968;1969;1970;1971;1972;1973;1974;1975;1976;1977;1978;1979;1980;1981;1982;1983;1984;1985;1986;1987;1988;1989;1990 1622;1623;1624;1625;1626;1627;1628;1629;1630;1631;1632;1633;1634;1635;1636;1637;1638;1639;1640;1641;1642;1643;1644;1645;1646;1647;1648;1649;1650;1651;1652;1653 1632 206 31 3788900 910320 AIMAQLPQEQK VQTEDDQLIAGQSARAIMAQLPQEQKAKIA QSARAIMAQLPQEQKAKIAEQVASFQEEKS R A I Q K A 2 0 0 0 0 3 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 11 0 1255.6595 P35221 P35221 671 681 CTNNA1 Catenin alpha-1 yes yes 3 0.07538 63.694 By MS/MS 3 0 1 1 0 0 0 807 812 834 1991 1654 1654 1 0 0 AINCATSGVVGLVNCLR GILADEDSSRPVWLKAINCATSGVVGLVNC NCATSGVVGLVNCLRREPGGNRLRCVLLSN K A I L R R 2 1 2 0 2 0 0 2 0 1 2 0 0 0 0 1 1 0 0 3 0 0 17 0 1802.9131 P49327 P49327 1445 1461 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 3.6114E-07 253.97 By MS/MS 2 0 2 2 179630 179630 0 808 946 835 1992;1993 1655;1656 1655 2 60757 0 AINDNTNSR KHEQEYMEVRERIHRAINDNTNSRVVLWSF RERIHRAINDNTNSRVVLWSFFEALVLVAM R A I S R V 1 1 3 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 9 0 1003.4683 Q15363 Q15363 160 168 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 2 0.013438 94.409 By MS/MS 9 0 1 1 2369400 2369400 0 809 1499 836 1994 1657 1657 1 46630 0 AINQGGLTSVAVR FSPEGRLYQVEYAFKAINQGGLTSVAVRGK FKAINQGGLTSVAVRGKDCAVIVTQKKVPD K A I V R G 2 1 1 0 0 1 0 2 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1284.715 P60900 P60900 31 43 PSMA6 Proteasome subunit alpha type-6 yes yes 2 2.6441E-12 246.08 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 14910000 14850000 59753 810 1099 837 1995;1996;1997;1998 1658;1659;1660;1661;1662 1660 5 214380 80633 AINTAVK SIAIGSAEGFNQADKAINTAVKSGRWVMLK EGFNQADKAINTAVKSGRWVMLKNVHLAPG K A I V K S 2 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 7 0 715.42284 Q14204 Q14204 4083 4089 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.010617 133.81 By MS/MS 1.5 0.5 1 1 2 1049400 1049400 0 811 1433 838 1999;2000 1663;1664 1663 2 296540 0 AINTFFAK EVKTFQGKPIMARIKAINTFFAKNGYRLMD PIMARIKAINTFFAKNGYRLMDSSIYSHPI K A I A K N 2 0 1 0 0 0 0 0 0 1 0 1 0 2 0 0 1 0 0 0 0 0 8 0 910.49125 Q71RC2 Q71RC2 273 280 LARP4 La-related protein 4 yes yes 2 0.018551 101.25 By MS/MS 4.5 0.5 1 1 2 2082800 2082800 0 812 1750 839 2001;2002 1665 1665 1 162410 0 AIQDAILEVLK YLYRELLVHLDDPERAIQDAILEVLKEGSG DPERAIQDAILEVLKEGSGLFPDLLVRETE R A I L K E 2 0 0 1 0 1 1 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1211.7125 Q86Y56 Q86Y56 804 814 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.0011683 118.23 By MS/MS 4.5 0.5 1 1 2 300600 300600 0 813 1850 840 2003;2004 1666 1666 1 26090 0 AIQDDCQVITAR AQAVLQQYQHLPSFRAIQDDCQVITARLAQ SFRAIQDDCQVITARLAQQLRQRFREGGSG R A I A R L 2 1 0 2 1 2 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 12 0 1388.6718 Q9UID3 Q9UID3 221 232 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.00028065 145.23 By MS/MS 4.5 0.5 1 1 2 4370800 4370800 0 814 2741 841 2005;2006 1667;1668 1667 2 316420 0 AIQGGTSHHLGQNFSK DYTTTIEAFISASGRAIQGGTSHHLGQNFS IQGGTSHHLGQNFSKMFEIVFEDPKIPGEK R A I S K M 1 0 1 0 0 2 0 3 2 1 1 1 0 1 0 2 1 0 0 0 0 0 16 0 1680.8332 P07814 P07814 1235 1250 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00023652 116.9 By MS/MS 3 0 1 1 0 0 0 815 512 842 2007 1669 1669 1 0 0 AIQLEYSEAR NNEWARYLYYTGRIKAIQLEYSEARRTMTN TGRIKAIQLEYSEARRTMTNALRKAPQHTA K A I A R R 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1178.5932 O43242 O43242 297 306 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00077157 128.03 By MS/MS 6 0 1 1 3579300 3579300 0 816 198 843 2008 1670 1670 1 24605 0 AIQQLFGK NVGQDGRQALEEAQKAIQQLFGKIKDIKDK ALEEAQKAIQQLFGKIKDIKDKAEKSEQMV K A I G K I 1 0 0 0 0 2 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 903.5178 Q5VIR6 Q5VIR6 103 110 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.031911 89.369 By MS/MS 4 0 1 1 1053300 1053300 0 817 1644 844 2009 1671 1671 1 99121 0 AIQSLKK AKVELVPPTPAEIPRAIQSLKKIVNSAQTG PTPAEIPRAIQSLKKIVNSAQTGSFKQLTV R A I K K I 1 0 0 0 0 1 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 7 1 786.49634 O75964;Q7Z4Y8 O75964 49 55 ATP5L;ATP5L2 ATP synthase subunit g, mitochondrial;ATP synthase subunit g 2, mitochondrial yes no 2 0.038585 132.09 By MS/MS 10 0 1 1 3034400 3034400 0 818 357 845 2010 1672 1672 1 163540 0 AIQSNQPDR SNKDEAERCISIALKAIQSNQPDRALRFLE ISIALKAIQSNQPDRALRFLEKAQRLYPTP K A I D R A 1 1 1 1 0 2 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 9 0 1027.5047 Q9NXW2 Q9NXW2 18 26 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.00078147 138.06 By MS/MS By matching 7 0 2 1 1 2347400 2322300 25109 819 2630 846 2011;2012 1673 1673 1 36456 45221 AIQTVSCLLQGPCDAGNR IKSWFEGQGLAGKLRAIQTVSCLLQGPCDA TVSCLLQGPCDAGNRALELSGVMESVIALC R A I N R A 2 1 1 1 2 2 0 2 0 1 2 0 0 0 1 1 1 0 0 1 0 0 18 0 1958.9302 Q9H3U1 Q9H3U1 414 431 UNC45A Protein unc-45 homolog A yes yes 2 7.8248E-18 269.05 By MS/MS 4 0 1 1 1612200 1612200 0 820 2442 847 2013 1674 1674 1 151720 0 AIRDGVIEASINHEK LQLDSPEDAEFIVAKAIRDGVIEASINHEK AIRDGVIEASINHEKGYVQSKEMIDIYSTR K A I E K G 2 1 1 1 0 0 2 1 1 3 0 1 0 0 0 1 0 0 0 1 0 0 15 1 1650.8689 O43242 O43242 441 455 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.00067438 122.12 By MS/MS 5.5 0.5 1 1 2 4753600 4753600 0 821 198 848 2014;2015 1675 1675 1 34127 0 AIRPQIDLK EDPQTSREIFNFVLKAIRPQIDLKRYAVPS FNFVLKAIRPQIDLKRYAVPSAGLRLFALH K A I L K R 1 1 0 1 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 9 1 1052.6342 P78527 P78527 255 263 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.01817 123.21 By MS/MS 3 1.41 1 1 1 1 1 5 2876800 2876800 0 822 1225 849 2016;2017;2018;2019;2020 1676;1677 1676 2 565060 0 AISAANLHLR YETQTFSSKTEWRVRAISAANLHLRTNHIY EWRVRAISAANLHLRTNHIYVSSDDIKETG R A I L R T 3 1 1 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1064.6091 Q6P2Q9 Q6P2Q9 2077 2086 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00046041 134.05 By MS/MS 2 0 1 1 1074300 1074300 0 823 1708 850 2021 1678 1678 1 363380 0 AISEPNFSVAYANMCR TEERLKGVIDLIFEKAISEPNFSVAYANMC ISEPNFSVAYANMCRCLMALKVPTTEKPTV K A I C R C 3 1 2 0 1 0 1 0 0 1 0 0 1 1 1 2 0 0 1 1 0 0 16 0 1828.8236 Q04637 Q04637 805 820 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 1.026E-07 222.81 By MS/MS 2 0 2 2 1393100 1393100 0 824 1291 851;852 2022;2023 1679;1680;1681 1679 768 3 471220 0 AISEQTGK ______________________________ ______________________________ K A I G K E 1 0 0 0 0 1 1 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 8 0 832.42905 P53396 P53396 5 12 ACLY ATP-citrate synthase yes yes 2 0.021068 98.458 By MS/MS 4 0 1 1 760400 760400 0 825 1030 853 2024 1682 1682 1 71559 0 AISEQTGKELLYK ______________________________ AKAISEQTGKELLYKFICTTSAIQNRFKYA K A I Y K F 1 0 0 0 0 1 2 1 0 1 2 2 0 0 0 1 1 0 1 0 0 0 13 1 1478.7981 P53396 P53396 5 17 ACLY ATP-citrate synthase yes yes 2;3 0.001206 134.3 By MS/MS 3.67 0.471 1 2 3 13764000 13764000 0 826 1030 854 2025;2026;2027 1683;1684 1684 2 1266400 0 AISGVHTVR GTIGHVAHGKSTVVKAISGVHTVRFKNELE KSTVVKAISGVHTVRFKNELERNITIKLGY K A I V R F 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 938.52976 P41091;Q2VIR3 P41091 60 68 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 7.3126E-05 167.23 By MS/MS 8 2 1 1 2 8831700 8831700 0 827 866 855 2028;2029 1685;1686 1686 2 106930 0 AISKDHLYGTLDPNTR RLEGVEGVAHIIDPKAISKDHLYGTLDPNT ISKDHLYGTLDPNTREWTDGLFTHVLRKII K A I T R E 1 1 1 2 0 0 0 1 1 1 2 1 0 0 1 1 2 0 1 0 0 0 16 1 1799.9166 Q14204 Q14204 2258 2273 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0030417 102.39 By MS/MS 1.5 0.5 1 1 2 502520 502520 0 828 1433 856 2030;2031 1687;1688 1687 2 140950 0 AISSASSPQSPGDALR WSDFPSWAMELLVEKAISSASSPQSPGDAL ISSASSPQSPGDALRRVFECISSGIILKGS K A I L R R 3 1 0 1 0 1 0 1 0 1 1 0 0 0 2 5 0 0 0 0 0 0 16 0 1542.7638 Q96KR1 Q96KR1 954 969 ZFR Zinc finger RNA-binding protein yes yes 2 0.00024861 183.89 By MS/MS 3 0 1 1 194770 194770 0 829 2190 857 2032 1689 1689 1 3563.7 0 AISSTEAVLNNR EGALIQFATYEEAKKAISSTEAVLNNRFIK AKKAISSTEAVLNNRFIKVYWHREGSTQQL K A I N R F 2 1 2 0 0 0 1 0 0 1 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1273.6626 Q5T8P6;Q9P2N5 Q5T8P6 586 597 RBM26;RBM27 RNA-binding protein 26;RNA-binding protein 27 yes no 2 4.9145E-06 187.97 By MS/MS 3 0 1 1 790720 790720 0 830 1637 858 2033 1690 1690 1 14468 0 AITFLQSATR GIAYLVKVSEGDLRKAITFLQSATRLTGGK GDLRKAITFLQSATRLTGGKEITEKVITDI K A I T R L 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 1 2 0 0 0 0 0 10 0 1106.6084 P35249 P35249 241 250 RFC4 Replication factor C subunit 4 yes yes 2 2.6213E-11 223.36 By MS/MS 7.5 0.5 1 1 2 2294700 2294700 0 831 816 859 2034;2035 1691 1691 1 35422 0 AITGASLADIMAK EIQKKRTRRAVKFQRAITGASLADIMAKRN QRAITGASLADIMAKRNQKPEVRKAQREQA R A I A K R 4 0 0 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1260.6748 P83731 P83731 81 93 RPL24 60S ribosomal protein L24 yes yes 2 1.661E-17 266.17 By MS/MS By MS/MS 9 0 3 2 1 5934600 5877000 57618 832 1241 860;861 2036;2037;2038 1692;1693;1694 1693 747 3 115660 131390 AITGFDDPFSGK LIDFDDRQQIYAAEKAITGFDDPFSGKTVS AEKAITGFDDPFSGKTVSVSEAIKKNLIDR K A I G K T 1 0 0 2 0 0 0 2 0 1 0 1 0 2 1 1 1 0 0 0 0 0 12 0 1253.5928 P15924 P15924 2092 2103 DSP Desmoplakin yes yes 2 7.2076E-05 160.53 By MS/MS 2 0.816 1 1 1 3 1409500 1409500 0 833 628 862 2039;2040;2041 1695;1696 1695 2 402090 0 AITGIQAFTASK TYEGTHDIHALILGRAITGIQAFTASK___ LGRAITGIQAFTASK_______________ R A I S K - 3 0 0 0 0 1 0 1 0 2 0 1 0 1 0 1 2 0 0 0 0 0 12 0 1206.6608 Q92947 Q92947 427 438 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes yes 2 0.00018082 161.99 By MS/MS 7.5 0.5 1 1 2 2509900 2509900 0 834 2081 863 2042;2043 1697 1697 1 37526 0 AITIAGIPQSIIECVK QVQVAGDMLPNSTERAITIAGIPQSIIECV ITIAGIPQSIIECVKQICVVMLETLSQSPP R A I V K Q 2 0 0 0 1 1 1 1 0 5 0 1 0 0 1 1 1 0 0 1 0 0 16 0 1711.9542 Q15366 Q15366 145 160 PCBP2 Poly(rC)-binding protein 2 yes yes 2 0.00095542 120.84 By MS/MS 7 0 1 1 70128 70128 0 835 1501 864 2044 1698 1698 1 1100.9 0 AITIAGVPQSVTECVK QVQVAGDMLPNSTERAITIAGVPQSVTECV ITIAGVPQSVTECVKQICLVMLETLSQSPQ R A I V K Q 2 0 0 0 1 1 1 1 0 2 0 1 0 0 1 1 2 0 0 3 0 0 16 0 1671.8866 Q15365 Q15365 145 160 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.00035951 144.51 By MS/MS 7.5 0.5 1 1 2 9555500 9555500 0 836 1500 865 2045;2046 1699 1699 1 145690 0 AIVAESLNNTSIK VELNASDTRSKSSLKAIVAESLNNTSIKGF LKAIVAESLNNTSIKGFYSNGAASSVSTKH K A I I K G 2 0 2 0 0 0 1 0 0 2 1 1 0 0 0 2 1 0 0 1 0 0 13 0 1358.7405 P35251 P35251 688 700 RFC1 Replication factor C subunit 1 yes yes 2 6.247E-05 177.57 By MS/MS 3 0 1 1 620020 620020 0 837 818 866 2047 1700;1701 1700 2 11345 0 AIVAGDQNVEYK CTTREDSPKCKGCFKAIVAGDQNVEYKGTV CFKAIVAGDQNVEYKGTVWHKDCFTCSNCK K A I Y K G 2 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 12 0 1305.6565 Q13642 Q13642 107 118 FHL1 Four and a half LIM domains protein 1 yes yes 2 2.3867E-12 217.66 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 5211800 5178500 33340 838 1407 867 2048;2049;2050;2051 1702;1703;1704 1703 3 81664 44991 AIVAIENPADVSVISSR INLKRTWEKLLLAARAIVAIENPADVSVIS VAIENPADVSVISSRNTGQRAVLKFAAATG R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 P08865 P08865 64 80 RPSA 40S ribosomal protein SA yes yes 2;3 2.6128E-24 282.12 By MS/MS By MS/MS 7.56 1.17 1 5 1 1 1 8 1 153900000 153590000 308500 839 529 868 2052;2053;2054;2055;2056;2057;2058;2059;2060 1705;1706;1707;1708;1709;1710;1711;1712;1713;1714;1715;1716 1713 12 2422200 555600 AIVDCIISIVEENPESK LSNMLRDDGGFEYKRAIVDCIISIVEENPE VDCIISIVEENPESKEAGLAHLCEFIEDCE R A I S K E 1 0 1 1 1 0 3 0 0 4 0 1 0 0 1 2 0 0 0 2 0 0 17 0 1914.9608 Q9UBF2 Q9UBF2 416 432 COPG2 Coatomer subunit gamma-2 yes yes 3 0.0038351 101.53 By MS/MS 4 0 1 1 44481 44481 0 840 2697 869 2061 1717;1718 1717 2 4186 0 AIVDLTGL EAKNSYVRDDAIFIKAIVDLTGL_______ DDAIFIKAIVDLTGL_______________ K A I G L - 1 0 0 1 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 8 0 800.46437 Q12933 Q12933 494 501 TRAF2 TNF receptor-associated factor 2 yes yes 1 0.043901 86.086 By MS/MS 7 0.816 1 1 1 3 2452700 2452700 0 841 1341 870 2062;2063;2064 1719 1719 0 18985 0 AIVQGQGER ERPLEARHAVLALLKAIVQGQGERLGVLRA VLALLKAIVQGQGERLGVLRALFFKVIKDY K A I E R L 1 1 0 0 0 2 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 956.50394 P49815 P49815 107 115 TSC2 Tuberin yes yes 2 0.0022692 117.89 By MS/MS 2 0 1 1 250150 250150 0 842 965 871 2065 1720 1720 1 84610 0 AIVQQWLEYR QANKEYLLGSTAEEKAIVQQWLEYRVTQVD TAEEKAIVQQWLEYRVTQVDGHSSKNDIHT K A I Y R V 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 10 0 1304.6877 O43324 O43324 69 78 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.00030328 140.11 By MS/MS 9.5 0.5 1 1 2 1045000 1045000 0 843 204 872 2066;2067 1721;1722 1722 2 25688 0 AIVWGMQTR SLQGKSTTLFSRHTKAIVWGMQTRAVQGML FSRHTKAIVWGMQTRAVQGMLDFDYVCSRD K A I T R A 1 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 9 0 1060.5488 P53396 P53396 499 507 ACLY ATP-citrate synthase yes yes 2 0.0059022 107.29 By MS/MS 4 0 1 1 493650 493650 0 844 1030 873 2068 1723 1723 565 1 46456 0 AIVWLQNR TRQLYFTCTAFGASRAIVWLQNRREATVER TAFGASRAIVWLQNRREATVERTRTTSSVR R A I N R R 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 8 0 998.56615 Q9ULT8 Q9ULT8 2094 2101 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.033818 88.643 By MS/MS 2 0.816 1 1 1 3 235680 235680 0 845 2774 874 2069;2070;2071 1724 1724 1 60514 0 AIYDFTDTVIR QELLDFKDKSAEDAKAIYDFTDTVIRIRNR EDAKAIYDFTDTVIRIRNRHNDVIPTMAQG K A I I R I 1 1 0 2 0 0 0 0 0 2 0 0 0 1 0 0 2 0 1 1 0 0 11 0 1312.6663 Q15118 Q15118 134 144 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.00016829 145.9 By MS/MS 7 0 1 1 1026300 1026300 0 846 1489 875 2072 1725 1725 1 16111 0 AIYELAISQPR FAELETILGDIDRARAIYELAISQPRLDMP DRARAIYELAISQPRLDMPEVLWKSYIDFE R A I P R L 2 1 0 0 0 1 1 0 0 2 1 0 0 0 1 1 0 0 1 0 0 0 11 0 1259.6874 Q9BZJ0 Q9BZJ0 661 671 CRNKL1 Crooked neck-like protein 1 yes yes 2 0.0084913 94.692 By MS/MS 5 0 1 1 524060 524060 0 847 2381 876 2073 1726 1726 1 5256.1 0 AIYFDGDFGQIVR LEGNFKGIVDLIEERAIYFDGDFGQIVRYG ERAIYFDGDFGQIVRYGEIPAELRAAATDH R A I V R Y 1 1 0 2 0 1 0 2 0 2 0 0 0 2 0 0 0 0 1 1 0 0 13 0 1499.7409 Q96RP9 Q96RP9 222 234 GFM1 Elongation factor G, mitochondrial yes yes 2 1.3519E-05 193.83 By MS/MS 5.5 0.5 1 1 2 1465100 1465100 0 848 2223 877 2074;2075 1727;1728 1727 1 12753 0 AIYQATYR SYDLEVEQAYDLARRAIYQATYRDAYSGGA AYDLARRAIYQATYRDAYSGGAVNLYHVRE R A I Y R D 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 8 0 984.50288 P28074 P28074 218 225 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.00027476 166.68 By MS/MS By matching 9.33 0.471 2 1 2 1 4487400 4448300 39096 849 751 878 2076;2077;2078 1729 1729 1 99206 89150 AKADAADQAALAAR RTKVEIANSRTAHARAKADAADQAALAARQ RAKADAADQAALAARQECDIARAVARELSP R A K A R Q 8 1 0 2 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 14 1 1341.7001 Q9HDC5 Q9HDC5 386 399 JPH1 Junctophilin-1 yes yes 2 0.044455 86.699 By MS/MS 5 0 1 1 609610 609610 0 850 2520 879 2079 1730 1730 0 6114.1 0 AKAERENADIIR HKNEMLRVETEARARAKAERENADIIREQI RARAKAERENADIIREQIRLKASEHRQTVL R A K I R E 3 2 1 1 0 0 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 12 2 1384.7423 Q9NVI7;Q5T9A4 Q5T9A4 197 208 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 3 0.0043021 103.44 By MS/MS 5 0 1 1 7627400 7627400 0 851 2598;1638 880 2080 1731 1731 1 76499 0 AKDPFAHLPK EEMDECEQALAAEPKAKDPFAHLPKSTFVL AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE K A K P K S 2 0 0 1 0 0 0 0 1 0 1 2 0 1 2 0 0 0 0 0 0 0 10 1 1122.6186 P26641 P26641 276 285 EEF1G Elongation factor 1-gamma yes yes 3 7.0993E-05 153.1 By MS/MS 6.5 0.5 1 1 2 20999000 20999000 0 852 736 881 2081;2082 1732;1733 1732 2 192300 0 AKEALELTDTGLLSGSEER GKFGRLKDDREKCAKAKEALELTDTGLLSG LELTDTGLLSGSEERVQVALEELQDLKGVW K A K E R V 2 1 0 1 0 0 4 2 0 0 4 1 0 0 0 2 2 0 0 0 0 0 19 1 2018.0168 Q14204 Q14204 1300 1318 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0001589 119.48 By MS/MS 1.5 0.5 1 1 2 627880 627880 0 853 1433 882 2083;2084 1734;1735 1735 2 172820 0 AKEDFLK KKGSEQESVKEFLAKAKEDFLKKWESPAQN SVKEFLAKAKEDFLKKWESPAQNTAHLDQF K A K L K K 1 0 0 1 0 0 1 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 7 1 849.45962 P17612;P22694 P17612 23 29 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 2 0.050563 134.81 By MS/MS 7 0 1 1 996390 996390 0 854 644;695 883 2085 1736 1736 1 15642 0 AKEEERLNK FDRWLDESDAEMELRAKEEERLNKLRLESE AEMELRAKEEERLNKLRLESEGSPETLTNL R A K N K L 1 1 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 2 1115.5935 Q9P035 Q9P035 122 130 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0032312 148.99 By MS/MS 2.5 1.12 1 1 1 1 4 999800 999800 0 855 2661 884 2086;2087;2088;2089 1737;1738 1738 2 244220 0 AKEFTNVYIK RFKSRKEREAELGARAKEFTNVYIKNFGED ELGARAKEFTNVYIKNFGEDMDDERLKDLF R A K I K N 1 0 1 0 0 0 1 0 0 1 0 2 0 1 0 0 1 0 1 1 0 0 10 1 1211.655 P11940;Q13310 P11940 187 196 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2;3 0.00016017 159.79 By MS/MS 5 0 2 2 26348000 26348000 0 856 586;1369 885 2090;2091 1739;1740 1739 2 264260 0 AKELLGQGLLLR KDAHNALLDIQSSGRAKELLGQGLLLRSLQ SGRAKELLGQGLLLRSLQERNQEQEKVERR R A K L R S 1 1 0 0 0 1 1 2 0 0 5 1 0 0 0 0 0 0 0 0 0 0 12 1 1309.8082 Q99613;B5ME19 Q99613 642 653 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 5.4911E-08 201.09 By MS/MS 5 2.22 1 2 2 2 2 2 2 13 68841000 68841000 0 857 2252 886 2092;2093;2094;2095;2096;2097;2098;2099;2100;2101;2102;2103;2104 1741;1742;1743;1744;1745;1746;1747;1748;1749;1750;1751;1752;1753 1744 13 4891600 0 AKELQQAR RETQEREAKAEMRRKAKELQQARRDAERQG KAEMRRKAKELQQARRDAERQGKKAPGFGG K A K A R R 2 1 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 942.52468 P48444 P48444 163 170 ARCN1 Coatomer subunit delta yes yes 2 0.03024 120.87 By MS/MS 6 0 1 1 1247900 1247900 0 858 934 887 2105 1754 1754 1 8578 0 AKESLKELSLAGNELGDEGAR GITAKGCGDLCRVLRAKESLKELSLAGNEL ELSLAGNELGDEGARLLCETLLEPGCQLES R A K A R L 3 1 1 1 0 0 4 3 0 0 4 2 0 0 0 2 0 0 0 0 0 0 21 2 2186.1179 P13489 P13489 282 302 RNH1 Ribonuclease inhibitor yes yes 3 3.3859E-06 136.61 By MS/MS 7 0 1 1 1449000 1449000 0 859 601 888 2106 1755 1755 1 22746 0 AKFEELNMDLFR ESFYEGEDFSETLTRAKFEELNMDLFRSTM LTRAKFEELNMDLFRSTMKPVQKVLEDSDL R A K F R S 1 1 1 1 0 0 2 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 12 1 1511.7442 P11021 P11021 325 336 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 9.0323E-08 206.36 By MS/MS 5.4 0.49 3 2 5 13016000 13016000 0 860 571 889;890 2107;2108;2109;2110;2111 1756;1757;1758 1757 252 3 127210 0 AKFENLCK LPEDEEEKKKMEESKAKFENLCKLMKEILD KKMEESKAKFENLCKLMKEILDKKVEKVTI K A K C K L 1 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 8 1 1008.5063 P08238;Q58FF8 P08238 558 565 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 0.013708 127.46 By MS/MS 4 0 2 2 8012800 8012800 0 861 521 891 2112;2113 1759;1760 1760 2 754060 0 AKFYSVYGSGQR KAPIQDIWYHEDRIRAKFYSVYGSGQRAFD RIRAKFYSVYGSGQRAFDLFNPNFKSTCQR R A K Q R A 1 1 0 0 0 1 0 2 0 0 0 1 0 1 0 2 0 0 2 1 0 0 12 1 1361.6728 Q9Y3D9 Q9Y3D9 72 83 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.0066397 118.77 By MS/MS 9 0 1 1 1239200 1239200 0 862 2875 892 2114 1761 1761 1 24387 0 AKGSETPGATPGSK PGHTPSLRWDETPGRAKGSETPGATPGSKI RAKGSETPGATPGSKIWDPTPSHTPAGAAT R A K S K I 2 0 0 0 0 0 1 3 0 0 0 2 0 0 2 2 2 0 0 0 0 0 14 1 1286.6466 O75533 O75533 239 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0071385 117.2 By MS/MS 3 0 1 1 240250 240250 0 863 332 893 2115 1762 1762 1 4396 0 AKHHAISAK ESKLPGDKGLVLMSRAKHHAISAKLNKPFL LVLMSRAKHHAISAKLNKPFLFDTKPLIVQ R A K A K L 3 0 0 0 0 0 0 0 2 1 0 2 0 0 0 1 0 0 0 0 0 0 9 1 961.54575 P27824 P27824 126 134 CANX Calnexin yes yes 2;3 0.00042792 164.68 By MS/MS 5.57 1.4 2 2 1 1 1 7 2525300 2525300 0 864 747 894 2116;2117;2118;2119;2120;2121;2122 1763;1764;1765 1763 3 198840 0 AKHLAAVEER VATAAAAALASAATKAKHLAAVEERKIKSL SAATKAKHLAAVEERKIKSLVALLVETQMK K A K E R K 3 1 0 0 0 0 2 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1122.6146 Q92922;Q8TAQ2 Q92922 881 890 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 3 0.0092656 89.403 By MS/MS 3 0 1 1 352760 352760 0 865 2079;1976 895 2123 1766 1766 1 6454.6 0 AKHSGDYFTLLR ITLLFTVLGSTARERAKHSGDYFTLLRHLL RERAKHSGDYFTLLRHLLNYAYNSNINVPN R A K L R H 1 1 0 1 0 0 0 1 1 0 2 1 0 1 0 1 1 0 1 0 0 0 12 1 1406.7306 Q93008 Q93008 1369 1380 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.00047259 154.67 By MS/MS 2 0 1 1 550030 550030 0 866 2085 896 2124 1767 1767 1 186040 0 AKIELLGSYDPQK LRDLNRKSNQVKTCKAKIELLGSYDPQKQL CKAKIELLGSYDPQKQLIIEDPYYGNDSDF K A K Q K Q 1 0 0 1 0 1 1 1 0 1 2 2 0 0 1 1 0 0 1 0 0 0 13 1 1460.7875 P24666 P24666 112 124 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 0.0014658 152.67 By MS/MS 10 0 1 1 794420 794420 0 867 715 897 2125 1768 1768 1 42816 0 AKIQDKEGIPPDQQR ITLEVEPSDTIENVKAKIQDKEGIPPDQQR AKIQDKEGIPPDQQRLIFAGKQLEDGRTLS K A K Q R L 1 1 0 2 0 3 1 1 0 2 0 2 0 0 2 0 0 0 0 0 0 0 15 2 1721.906 P62979;P0CG47;P0CG48;P62987 P62979 28 42 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 3 0.0085708 90.476 By MS/MS 2.5 1.12 1 1 1 1 4 2350300 2350300 0 868 1190;1191 898 2126;2127;2128;2129 1769;1770;1771 1771 3 383890 0 AKKPALVAK AQLREERLRQYAEKKAKKPALVAKSSILLD QYAEKKAKKPALVAKSSILLDVKPWDDETD K A K A K S 3 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0 0 0 0 1 0 0 9 2 924.61204 P24534;P29692 P29692 187 195 EEF1B2;EEF1D Elongation factor 1-beta;Elongation factor 1-delta no no 3 0.0068853 103.83 By MS/MS 7.5 0.5 1 1 2 1222800 1222800 0 869 760;713 899 2130;2131 1772;1773 1773 2 16727 0 AKLDELSAKR ALEYTIYNQELNETRAKLDELSAKRETSGE LNETRAKLDELSAKRETSGEKSRQLRDAQQ R A K K R E 2 1 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 10 2 1129.6455 Q9UQE7 Q9UQE7 237 246 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.008783 97.452 By MS/MS 3 0 1 1 476020 476020 0 870 2807 900 2132 1774 1774 1 8709.8 0 AKLEEAILGSIGAR ERMNSLTFKKSKDMRAKLEEAILGSIGARQ RAKLEEAILGSIGARQEMVRRSRGQLGTYT R A K A R Q 3 1 0 0 0 0 2 2 0 2 2 1 0 0 0 1 0 0 0 0 0 0 14 1 1426.8144 Q96N67 Q96N67 1394 1407 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0077107 115.12 By MS/MS 2 0 1 1 262590 262590 0 871 2201 901 2133 1775 1775 1 88820 0 AKLEEHFKNQELR CLNNEHFEELGGILKAKLEEHFKNQELRQV LKAKLEEHFKNQELRQVKRQDEDYDEQVEE K A K L R Q 1 1 1 0 0 1 3 0 1 0 2 2 0 1 0 0 0 0 0 0 0 0 13 2 1640.8635 O00410 O00410 799 811 IPO5 Importin-5 yes yes 3;4 0.020466 82.774 By MS/MS 4.5 0.5 2 2 4 2862800 2862800 0 872 103 902 2134;2135;2136;2137 1776;1777 1777 1 207500 0 AKLTHPGK RAPRALAAAAPASGKAKLTHPGKAILAGGL AAPASGKAKLTHPGKAILAGGLAGGIEICI K A K G K A 1 0 0 0 0 0 0 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 8 1 850.50249 P53007 P53007 20 27 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.016962 132.76 By MS/MS 8 0 1 1 948320 948320 0 873 1026 903 2138 1778 1778 1 11972 0 AKPAEAPAAAAPK TPLFTLRKTGAAPAKAKPAEAPAAAAPKAE AKAKPAEAPAAAAPKAEPTAAAVPPPAAPI K A K P K A 7 0 0 0 0 0 1 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 13 1 1191.6612 P36957 P36957 153 165 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2;3 0.0019279 143 By MS/MS By MS/MS 6.2 0.4 4 1 3 2 13181000 12841000 340290 874 842 904 2139;2140;2141;2142;2143 1779;1780 1780 2 92007 348700 AKPLLLQLPIGEAK ASFKYAVESIREKLKAKPLLLQLPIGEAKT KAKPLLLQLPIGEAKTFKGVVDVVMKEKLL K A K A K T 2 0 0 0 0 1 1 1 0 1 4 2 0 0 2 0 0 0 0 0 0 0 14 1 1489.9232 Q969S9 Q969S9 217 230 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 3 0.0004011 131.79 By MS/MS 4.5 0.5 1 1 2 431590 431590 0 875 2095 905 2144;2145 1781;1782 1782 2 14209 0 AKPYEGSILEADCDILIPAASEK EDFKLQHGSILGFPKAKPYEGSILEADCDI LEADCDILIPAASEKQLTKSNAPRVKAKII K A K E K Q 4 0 0 2 1 0 3 1 0 3 2 2 0 0 2 2 0 0 1 0 0 0 23 1 2489.236 P00367 P00367 364 386 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2;3 8.4062E-07 173.34 By MS/MS 6 0 2 2 11012000 11012000 0 876 441 906 2146;2147 1783;1784;1785 1785 3 75701 0 AKREEEER KAAKLEQERREAEMRAKREEEERKRQEELR RREAEMRAKREEEERKRQEELRRQQEEILR R A K E R K 1 2 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 2 1045.5152 Q6Y7W6;O75420 Q6Y7W6 748 755 GIGYF2;GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 2;PERQ amino acid-rich with GYF domain-containing protein 1 yes no 2 0.016507 141.52 By MS/MS 2 0 1 1 75328 75328 0 877 1738 907 2148 1786 1786 1 25479 0 AKREEELR EQMLKEREERERAERAKREEELREYQERVK ERERAERAKREEELREYQERVKKLEEVERK R A K L R E 1 2 0 0 0 0 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1029.5567 Q14152 Q14152 835 842 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0059676 140.35 By MS/MS 3 0.816 1 1 1 3 4072200 4072200 0 878 1422 908 2149;2150;2151 1787 1787 1 223820 0 AKSTLEAETR QDKARLQRLEDELNRAKSTLEAETRVKQRL DELNRAKSTLEAETRVKQRLECEKQQIQND R A K T R V 2 1 0 0 0 0 2 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 10 1 1104.5775 P15924 P15924 1839 1848 DSP Desmoplakin yes yes 2 0.031491 119.27 By matching By MS/MS 3.33 0.471 2 1 2 1 1371500 462020 909530 879 628 909 2152;2153;2154 1788 1788 1 31330 115770 AKTCTFILR QIGGERYNFFTGCPKAKTCTFILRGGAEQF FTGCPKAKTCTFILRGGAEQFMEETERSLH K A K L R G 1 1 0 0 1 0 0 0 0 1 1 1 0 1 0 0 2 0 0 0 0 0 9 1 1108.6063 Q99832 Q99832 367 375 CCT7 T-complex protein 1 subunit eta yes yes 3 0.040608 78.939 By MS/MS 6 0 1 1 1334900 1334900 0 880 2270 910 2155 1789 1789 1 9176.3 0 AKTGGAYGEDLGADYNLSQVCDGK YTPKAKYHGNVMLLRAKTGGAYGEDLGADY DLGADYNLSQVCDGKVSVHVIEGDHRTLLE R A K G K V 3 0 1 3 1 1 1 5 0 0 2 2 0 0 0 1 1 0 2 1 0 0 24 1 2488.1176 P49327 P49327 2448 2471 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.004235 93.404 By MS/MS 2 0 1 1 614060 614060 0 881 946 911 2156 1790 1790 1 207700 0 AKVEFNIR EMTLDEWKAIQNKDRAKVEFNIRKPNEGAD AIQNKDRAKVEFNIRKPNEGADGQWKKGFV R A K I R K 1 1 1 0 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 8 1 975.55016 Q8NC51 Q8NC51 302 309 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.028246 122.18 By MS/MS 6 0 1 1 2642400 2642400 0 882 1946 912 2157 1791 1791 1 18164 0 AKVEQVLSLEPQHELK ______________________________ KVEQVLSLEPQHELKFRGPFTDVVTTNLKL M A K L K F 1 0 0 0 0 2 3 0 1 0 3 2 0 0 1 1 0 0 0 2 0 0 16 1 1847.0153 O95292 O95292 2 17 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 6.4253E-05 175.27 By MS/MS 8 0 1 1 1394600 1394600 0 883 401 913 2158 1792 1792 1 17607 0 AKYHGNVMLLR SFYYKLRAAEQYTPKAKYHGNVMLLRAKTG YTPKAKYHGNVMLLRAKTGGAYGEDLGADY K A K L R A 1 1 1 0 0 0 0 1 1 0 2 1 1 0 0 0 0 0 1 1 0 0 11 1 1300.7074 P49327 P49327 2437 2447 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.020966 82.417 By MS/MS 2 0 1 1 150830 150830 0 884 946 914 2159 1793 1793 499 1 51018 0 AKYIYDSAFHPDTGEK QGIVPPGLTENELWRAKYIYDSAFHPDTGE KYIYDSAFHPDTGEKMILIGRMSAQVPMNM R A K E K M 2 0 0 2 0 0 1 1 1 1 0 2 0 1 1 1 1 0 2 0 0 0 16 1 1840.8632 Q9H9B4 Q9H9B4 71 86 SFXN1 Sideroflexin-1 yes yes 3 0.010175 139.58 By MS/MS 8 0 1 1 7436100 7436100 0 885 2485 915 2160 1794 1794 1 93880 0 ALAAAGYDVEK ASKERSGVSLAALKKALAAAGYDVEKNNSR ALKKALAAAGYDVEKNNSRIKLGLKSLVSK K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P10412;P16402;P22492;Q02539;P16403 P16403 65 75 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 no no 2 0.0077445 96.665 By MS/MS By MS/MS 5 2.83 1 2 1 1 2 1 1 5 4 3889500 3609200 280240 886 560;633 916 2161;2162;2163;2164;2165;2166;2167;2168;2169 1795;1796;1797;1798;1799 1799 5 89673 353220 ALAAAGYDVEKNNSR ASKERSGVSLAALKKALAAAGYDVEKNNSR ALAAAGYDVEKNNSRIKLGLKSLVSKGTLV K A L S R I 4 1 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 15 1 1577.7798 P10412;P16402;P22492;Q02539;P16403 P16403 65 79 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 no no 2 0.00065451 179.67 By MS/MS 7.5 0.5 1 1 2 2464500 2464500 0 887 560;633 917 2170;2171 1800;1801 1801 2 34259 0 ALAAFLKK PGVTVKDVNQQEFVRALAAFLKKSGKLKVP NQQEFVRALAAFLKKSGKLKVPEWVDTVKL R A L K K S 3 0 0 0 0 0 0 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 8 1 860.54837 P39019 P39019 17 24 RPS19 40S ribosomal protein S19 yes yes 2 0.014654 128.82 By MS/MS By matching 10 0 2 1 1 31748000 31675000 72525 888 853 918 2172;2173 1802 1802 1 1707200 92852 ALAAPAAEEKEEAREK ______________________________ LAAPAAEEKEEAREKMLAAKSADGSAPAGE R A L E K M 6 1 0 0 0 0 5 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 16 2 1711.8741 Q01650 Q01650 10 25 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 3 0.045289 65.805 By MS/MS By matching 7 0 2 1 1 3390500 3355600 34834 889 1268 919 2174;2175 1803 1803 1 52677 62735 ALADDDFLTVTGK SDIAITKDMFEEALRALADDDFLTVTGKTV LRALADDDFLTVTGKTVRLL__________ R A L G K T 2 0 0 3 0 0 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 13 0 1364.6824 P33991 P33991 846 858 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.00013473 169.82 By MS/MS 6 1.41 1 1 1 1 1 5 6380000 6380000 0 890 806 920 2176;2177;2178;2179;2180 1804;1805 1804 2 477580 0 ALADENEFVR KFTPYVGPIIPCILKALADENEFVRDTALR PCILKALADENEFVRDTALRAGQRVISMYA K A L V R D 2 1 1 1 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1162.5619 Q92616 Q92616 1785 1794 GCN1L1 Translational activator GCN1 yes yes 2 1.0271E-10 216.12 By MS/MS 2.4 1.02 1 2 1 1 5 6217100 6217100 0 891 2064 921 2181;2182;2183;2184;2185 1806;1807;1808 1807 3 1597600 0 ALADTENLR KLEEQLKETVEKYKRALADTENLRQRSQKL VEKYKRALADTENLRQRSQKLVEEAKLYGI R A L L R Q 2 1 1 1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1001.5142 Q9HAV7 Q9HAV7 81 89 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.014159 93.143 By MS/MS 9 0 1 1 3954400 3954400 0 892 2496 922 2186 1809 1809 1 77824 0 ALADVATVLGR LSPEEDLNFVTDTAKALADVATVLGRALYE DTAKALADVATVLGRALYELAGGTNFSDTV K A L G R A 3 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1084.6241 Q92542 Q92542 486 496 NCSTN Nicastrin yes yes 2 0.00013648 148.69 By MS/MS 4 0.816 1 1 1 3 1909900 1909900 0 893 2052 923 2187;2188;2189 1810;1811 1811 1 149720 0 ALAEEVEQVHR PRLKRELEDHIRKLRALAEEVEQVHRGTTI RKLRALAEEVEQVHRGTTIANVVSNSVGTT R A L H R G 2 1 0 0 0 1 3 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1279.6521 Q9BQE5 Q9BQE5 101 111 APOL2 Apolipoprotein L2 yes yes 2 0.00037769 133.99 By MS/MS 7 0 1 1 443270 443270 0 894 2292 924 2190 1812 1812 1 6958.6 0 ALAEIAK INKGKGFGFIKLESRALAEIAKAELDDTPM GFIKLESRALAEIAKAELDDTPMRGRQLRV R A L A K A 3 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 714.42759 P23246 P23246 343 349 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.034662 101.21 By MS/MS 4 0.816 1 1 1 3 1133100 1133100 0 895 700 925 2191;2192;2193 1813 1813 1 43994 0 ALAENSGVK YAIKKFAEAFEAIPRALAENSGVKANEVIS FEAIPRALAENSGVKANEVISKLYAVHQEG R A L V K A 2 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 887.47125 P50990 P50990 451 459 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0016116 126.24 By MS/MS 6 2.88 1 1 1 1 1 1 1 7 55861000 55861000 0 896 984 926 2194;2195;2196;2197;2198;2199;2200 1814;1815 1814 2 586380 0 ALAENSGVKANEVISK YAIKKFAEAFEAIPRALAENSGVKANEVIS LAENSGVKANEVISKLYAVHQEGNKNVGLD R A L S K L 3 0 2 0 0 0 2 1 0 1 1 2 0 0 0 2 0 0 0 2 0 0 16 1 1628.8733 P50990 P50990 451 466 CCT8 T-complex protein 1 subunit theta yes yes 2 7.7907E-07 219.97 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 29745000 29745000 0 897 984 927 2201;2202;2203;2204;2205;2206 1816 1816 1 233230 0 ALAEYVVQQEGAK PKLIGDRPNTYIYTKALAEYVVQQEGAKLN TKALAEYVVQQEGAKLNVAIVRPSIVGASW K A L A K L 3 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 13 0 1404.7249 Q8WVX9 Q8WVX9 209 221 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 1.3332E-17 260.6 By MS/MS By MS/MS 4.88 2.37 1 1 1 3 1 1 6 2 29803000 29704000 98578 898 2031 928 2207;2208;2209;2210;2211;2212;2213;2214 1817;1818;1819;1820 1819 4 570590 101010 ALAIYEGQLGPDNPNVAR QNQGKYEAVERYYQRALAIYEGQLGPDNPN IYEGQLGPDNPNVARTKNNLASCYLKQGKY R A L A R T 3 1 2 1 0 1 1 2 0 1 2 0 0 0 2 0 0 0 1 1 0 0 18 0 1896.9694 Q9NSK0 Q9NSK0 363 380 KLC4 Kinesin light chain 4 yes yes 2 0.00019035 175.6 By MS/MS 5 0 1 1 2173700 2173700 0 899 2572 929 2215 1821 1821 1 21801 0 ALALAALAAVEPACGSR ______________________________ ALAALAAVEPACGSRYQQLQNEEESGEPEQ M A L S R Y 7 1 0 0 1 0 1 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 17 0 1639.8716 Q9BT67 Q9BT67 2 18 NDFIP1 NEDD4 family-interacting protein 1 yes yes 2 0.00027123 138.45 By MS/MS 8 0 1 1 107180 107180 0 900 2314 930 2216 1822;1823 1823 2 1353.2 0 ALALLEDEER WCRRSRGLKALRLCRALALLEDEERVVRLG LRLCRALALLEDEERVVRLGVRACDLPAWV R A L E R V 2 1 0 1 0 0 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1157.5928 A0FGR8 A0FGR8 163 172 ESYT2 Extended synaptotagmin-2 yes yes 2 2.9363E-05 161.79 By MS/MS 2.5 1.5 1 1 2 1796100 1796100 0 901 6 931 2217;2218 1824;1825 1825 2 192790 0 ALANESGLNFLAIK LLYGPPGCSKTMIAKALANESGLNFLAIKG KALANESGLNFLAIKGPELMNKYVGESERA K A L I K G 3 0 2 0 0 0 1 1 0 1 3 1 0 1 0 1 0 0 0 0 0 0 14 0 1459.8035 Q8NB90 Q8NB90 680 693 SPATA5 Spermatogenesis-associated protein 5 yes yes 2 0.00044262 145.23 By MS/MS 4 0 1 1 100420 100420 0 902 1937 932 2219 1826 1826 1 9450.1 0 ALANQFLAPGR KGMLQAEKLTSSSEKALANQFLAPGRVPTT SSEKALANQFLAPGRVPTTARERVPATKTV K A L G R V 3 1 1 0 0 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 11 0 1156.6353 Q9NZ43 Q9NZ43 84 94 USE1 Vesicle transport protein USE1 yes yes 2 2.9334E-05 158.07 By MS/MS 8.5 0.5 1 1 2 3526000 3526000 0 903 2644 933 2220;2221 1827 1827 1 45542 0 ALANSLACQGK KKENLKAAQEEYVKRALANSLACQGKYTPS YVKRALANSLACQGKYTPSGQAGAAASESL R A L G K Y 3 0 1 0 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1131.5706 P04075 P04075 332 342 ALDOA Fructose-bisphosphate aldolase A yes yes 2 5.4075E-13 228.05 By MS/MS 7.5 0.5 1 1 2 9523000 9523000 0 904 467 934 2222;2223 1828 1828 1 148240 0 ALAVGGLGSIIR PTENSSAVLLQWHEKALAVGGLGSIIRVLT HEKALAVGGLGSIIRVLTARKTV_______ K A L I R V 2 1 0 0 0 0 0 3 0 2 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1125.687 Q9BPX5 Q9BPX5 134 145 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 2 0.00021522 156.83 By MS/MS 9 0 1 1 224310 224310 0 905 2280 935 2224 1829 1829 1 4414.4 0 ALAVSDLNR EFEVELERGKTLHIKALAVSDLNRAGQRQV KTLHIKALAVSDLNRAGQRQVFFELNGQLR K A L N R A 2 1 1 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 957.52434 P11498 P11498 1062 1070 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0019318 122.18 By MS/MS 3 0 1 1 2192200 2192200 0 906 580 936 2225 1830 1830 1 40110 0 ALAVVYGPHEIR AQADGSAYIEQGNTKALAVVYGPHEIRGSR NTKALAVVYGPHEIRGSRARALPDRALVNC K A L I R G 2 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 1 2 0 0 12 0 1323.7299 Q9NPD3 Q9NPD3 48 59 EXOSC4 Exosome complex component RRP41 yes yes 2;3 0.016097 113.69 By MS/MS 8 0 2 2 2224200 2224200 0 907 2531 937 2226;2227 1831;1832 1831 2 28081 0 ALAYFEQLK LLGLNPNADSDFRQRALAYFEQLKISPDAW SDFRQRALAYFEQLKISPDAWQVCAEALAQ R A L L K I 2 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1081.5808 O43592 O43592 21 29 XPOT Exportin-T yes yes 2 9.9468E-05 162.25 By MS/MS 4.5 0.5 1 1 2 2631900 2631900 0 908 220 938 2228;2229 1833 1833 1 229430 0 ALCADEYR VVAQNMHELFLEKMRALCADEYRARCRSYS LFLEKMRALCADEYRARCRSYSISIGAHLL R A L Y R A 2 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 996.43348 O14654 O14654 330 337 IRS4 Insulin receptor substrate 4 yes yes 2 0.018237 101.6 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 1998800 1998800 0 909 129 939 2230;2231;2232;2233;2234;2235 1834 1834 1 111360 0 ALCATRQEPLLIGSTK GTKVGDPQELNGITRALCATRQEPLLIGST LCATRQEPLLIGSTKSNMGHPEPASGLAAL R A L T K S 2 1 0 0 1 1 1 1 0 1 3 1 0 0 1 1 2 0 0 0 0 0 16 1 1756.9506 P49327 P49327 311 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0027056 154.72 By MS/MS 2.75 0.829 2 1 1 4 1160100 1160100 0 910 946 940 2236;2237;2238;2239 1835;1836 1835 2 290900 0 ALCDLGPWVK AYHVEREKERDPEHRALCDLGPWVKCSAAL DPEHRALCDLGPWVKCSAALASRWGRGFGL R A L V K C 1 0 0 1 1 0 0 1 0 0 2 1 0 0 1 0 0 1 0 1 0 0 10 0 1157.5903 Q8N0U8 Q8N0U8 48 57 VKORC1L1 Vitamin K epoxide reductase complex subunit 1-like protein 1 yes yes 2 0.0093737 95.741 By MS/MS 9 0 1 1 244990 244990 0 911 1896 941 2240 1837 1837 1 4821.5 0 ALCDVGTAISCSR ALHVKAARARDRDYRALCDVGTAISCSRVF YRALCDVGTAISCSRVFSSRWGRGFGLVEH R A L S R V 2 1 0 1 2 0 0 1 0 1 1 0 0 0 0 2 1 0 0 1 0 0 13 0 1408.6439 Q9BQB6 Q9BQB6 41 53 VKORC1 Vitamin K epoxide reductase complex subunit 1 yes yes 2 2.6308E-11 225.93 By MS/MS 5 3.74 1 1 1 1 1 5 4473700 4473700 0 912 2288 942 2241;2242;2243;2244;2245 1838;1839;1840;1841 1838 4 488260 0 ALCDYKQDQK PRNPDYRSNKPIILRALCDYKQDQKIVHKG PIILRALCDYKQDQKIVHKGDECILKDNNE R A L Q K I 1 0 0 2 1 2 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1267.5867 P15924 P15924 465 474 DSP Desmoplakin yes yes 2 8.6844E-10 209.21 By MS/MS By matching 1.75 0.829 2 1 1 3 1 837790 783140 54644 913 628 943 2246;2247;2248;2249 1842 1842 1 192820 54644 ALCQITDSTMLQAIER DMTGKEDNYRGPAVRALCQITDSTMLQAIE LCQITDSTMLQAIERYMKQAIVDKVPSVSS R A L E R Y 2 1 0 1 1 2 1 0 0 2 2 0 1 0 0 1 2 0 0 0 0 0 16 0 1848.9074 Q9Y678 Q9Y678 127 142 COPG1 Coatomer subunit gamma-1 yes yes 2 1.2874E-16 256.13 By MS/MS 4 0 1 1 1402000 1402000 0 914 2933 944 2250 1843 1843 1212 1 131940 0 ALCYLVLK SLLCSNLESATYSNRALCYLVLKQYTEAVK SATYSNRALCYLVLKQYTEAVKDCTEALKL R A L L K Q 1 0 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 8 0 978.55722 Q15785 Q15785 234 241 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 0.000337 163.41 By MS/MS 7.5 0.5 1 1 2 1802700 1802700 0 915 1532 945 2251;2252 1844;1845 1845 2 23598 0 ALCYVISGQDQR SSAHLVDEEFFQRVRALCYVISGQDQRKEE RVRALCYVISGQDQRKEEGMRAVLDALLAS R A L Q R K 1 1 0 1 1 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1408.6769 Q66K74 Q66K74 973 984 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.00042886 135.8 By MS/MS 3 0 1 1 302540 302540 0 916 1669 946 2253 1846 1846 1 5535.7 0 ALDAGLALGPSSPLLR LQAVGQLVQKEQWDRALDAGLALGPSSPLL LDAGLALGPSSPLLRSEIFKLLLAEFAQHR R A L L R S 3 1 0 1 0 0 0 2 0 0 5 0 0 0 2 2 0 0 0 0 0 0 16 0 1549.8828 Q86YV9 Q86YV9 652 667 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.0002806 136.7 By MS/MS 5 0 1 1 936330 936330 0 917 1856 947 2254 1847 1847 1 9390.9 0 ALDCSSSIR DQFLVVARAVGTFARALDCSSSIRQPSLHM VGTFARALDCSSSIRQPSLHMSAAAASRDI R A L I R Q 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 9 0 1007.4706 O94776 O94776 206 214 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.027094 85.862 By MS/MS 5 0 1 1 1520900 1520900 0 918 365 948 2255 1848 1848 1 15254 0 ALDDFVLGSAR ______________________________ PPLRALDDFVLGSARLAAPDPCDPQRWCHR R A L A R L 2 1 0 2 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1162.5982 O60831 O60831 11 21 PRAF2 PRA1 family protein 2 yes yes 2 1.0235E-05 172.98 By MS/MS 8 0.816 1 1 1 3 1743800 1743800 0 919 282 949 2256;2257;2258 1849 1849 1 32980 0 ALDDILNLK QRGTDPTYGPNGCFKALDDILNLKLVHILN PNGCFKALDDILNLKLVHILNMVTGTIHTY K A L L K L 1 0 1 2 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1013.5757 O14920 O14920 302 310 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 2 0.0016533 133.23 By MS/MS 4 0 1 1 188020 188020 0 920 144 950 2259 1850 1850 1 17694 0 ALDDKNCWEK ALECGNIEIALEAAKALDDKNCWEKLGEVA LEAAKALDDKNCWEKLGEVALLQGNHQIVE K A L E K L 1 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 10 1 1277.571 P53621 P53621 667 676 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0069646 115.7 By MS/MS 3 0 1 1 363920 363920 0 921 1034 951 2260 1851 1851 1 6658.7 0 ALDDMISTLK EQQMHPTVVISAYRKALDDMISTLKKISIP SAYRKALDDMISTLKKISIPVDISDSDMML K A L L K K 1 0 0 2 0 0 0 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 10 0 1105.5689 P49368 P49368 129 138 CCT3 T-complex protein 1 subunit gamma yes yes 2 6.6604E-11 219.54 By MS/MS 6 0.816 1 1 1 3 5471100 5471100 0 922 947 952 2261;2262;2263 1852;1853;1854 1853 3 46043 0 ALDDMISTLKK EQQMHPTVVISAYRKALDDMISTLKKISIP AYRKALDDMISTLKKISIPVDISDSDMMLN K A L K K I 1 0 0 2 0 0 0 0 0 1 2 2 1 0 0 1 1 0 0 0 0 0 11 1 1233.6639 P49368 P49368 129 139 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00068936 123.96 By MS/MS 5.8 0.748 2 2 1 5 15073000 15073000 0 923 947 953 2264;2265;2266;2267;2268 1855;1856;1857;1858 1857 4 127350 0 ALDEATKYALER TRPVVAAGAVGLAQRALDEATKYALERKTF AQRALDEATKYALERKTFGKLLVEHQAISF R A L E R K 3 1 0 1 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 12 1 1378.7092 P11310 P11310 295 306 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0031192 132.03 By MS/MS 7 0 1 1 2893500 2893500 0 924 577 954 2269 1859 1859 1 45423 0 ALDEGDIALLK QRKTKEDEKDDKPIRALDEGDIALLKTYGQ KPIRALDEGDIALLKTYGQSTYSRQIKQVE R A L L K T 2 0 0 2 0 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1156.634 P35998 P35998 24 34 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.9964E-05 157.99 By MS/MS 7.5 1.12 1 1 1 1 4 14837000 14837000 0 925 831 955 2270;2271;2272;2273 1860;1861;1862;1863 1862 4 154370 0 ALDGAFTEENR KEVANSTANLVKTIKALDGAFTEENRAQCR KTIKALDGAFTEENRAQCRAATAPLLEAVD K A L N R A 2 1 1 1 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1221.5626 Q9Y490 Q9Y490 1545 1555 TLN1 Talin-1 yes yes 2 1.7182E-09 218.94 By MS/MS 2 0 1 1 1599800 1599800 0 926 2888 956 2274 1864 1864 1 541130 0 ALDGPEQMELEEGKAGSGLR ______________________________ EQMELEEGKAGSGLRQYYLSKIEELQLIVN M A L L R Q 2 1 0 1 0 1 4 4 0 0 3 1 1 0 1 1 0 0 0 0 0 0 20 1 2086.0001 P62195 P62195 2 21 PSMC5 26S protease regulatory subunit 8 yes yes 2 2.0108E-13 246.34 By MS/MS 7 0 1 1 1008300 1008300 0 927 1142 957 2275 1865 1865 1 15828 0 ALDIPLVK WAPRPFNLRSGRTRRALDIPLVKNWYREHC RSGRTRRALDIPLVKNWYREHCPAGQPVKV R A L V K N 1 0 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 867.54295 Q6P2Q9 Q6P2Q9 421 428 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.023865 95.352 By MS/MS 2.5 1.12 1 1 1 1 4 2188600 2188600 0 928 1708 958 2276;2277;2278;2279 1866 1866 1 578120 0 ALDLDSSCK EAMKDYTKAMDVYQKALDLDSSCKEAADGY MDVYQKALDLDSSCKEAADGYQRCMMAQYN K A L C K E 1 0 0 2 1 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 9 0 1007.4594 P31948 P31948 454 462 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.040129 80.219 By MS/MS 5 0 1 1 1502200 1502200 0 929 795 959 2280 1867 1867 1 15067 0 ALDLDSSCKEAADGYQR EAMKDYTKAMDVYQKALDLDSSCKEAADGY DLDSSCKEAADGYQRCMMAQYNRHDSPEDV K A L Q R C 3 1 0 3 1 1 1 1 0 0 2 1 0 0 0 2 0 0 1 0 0 0 17 1 1897.8476 P31948 P31948 454 470 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.00062611 115.56 By MS/MS 5.5 0.5 1 1 2 2299800 2299800 0 930 795 960 2281;2282 1868 1868 1 21887 0 ALDLVAAK ISDDLMQKISTQNRRALDLVAAKCYYYHAR ISTQNRRALDLVAAKCYYYHARVYEFLDKL R A L A K C 3 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 799.48035 O43242 O43242 202 209 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.032104 89.296 By MS/MS 5.5 0.5 1 1 2 3343000 3343000 0 931 198 961 2283;2284 1869 1869 1 23602 0 ALDQFVNFSEQK QCNTELKKYSHVNKKALDQFVNFSEQKEKL NKKALDQFVNFSEQKEKLIKRQEELDRGYK K A L Q K E 1 0 1 1 0 2 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 12 0 1424.6936 Q9UQE7 Q9UQE7 986 997 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.0101E-08 215.08 By MS/MS 2.5 0.5 1 1 2 485410 485410 0 932 2807 962 2285;2286 1870 1870 1 39570 0 ALDTLEDDMTISVEK GEMRNAVCIFYLVLRALDTLEDDMTISVEK ALDTLEDDMTISVEKKVPLLHNFHSFLYQP R A L E K K 1 0 0 3 0 0 2 0 0 1 2 1 1 0 0 1 2 0 0 1 0 0 15 0 1678.7971 P37268 P37268 78 92 FDFT1 Squalene synthase yes yes 2 0.00028709 131.83 By MS/MS 7 0 1 1 561310 561310 0 933 845 963 2287 1871 1871 425 0 8811.6 0 ALDTMNFDVIK GYAYVNFQQPADAERALDTMNFDVIKGKPV DAERALDTMNFDVIKGKPVRIMWSQRDPSL R A L I K G 1 0 1 2 0 0 0 0 0 1 1 1 1 1 0 0 1 0 0 1 0 0 11 0 1265.6326 P11940;Q13310 P11940 68 78 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2 9.8159E-10 221.68 By MS/MS By matching 6.6 2.06 3 1 1 4 1 10285000 10254000 30686 934 586;1369 964;965 2288;2289;2290;2291;2292 1872;1873;1874;1875 1874 272 3 123230 25770 ALDTVLFGPPLLTR LKMTDRSHRQKLQLKALDTVLFGPPLLTRH KALDTVLFGPPLLTRHNHLKDFMLVVSIVI K A L T R H 1 1 0 1 0 0 0 1 0 0 4 0 0 1 2 0 2 0 0 1 0 0 14 0 1511.8712 Q13586 Q13586 194 207 STIM1 Stromal interaction molecule 1 yes yes 2 0.0004235 140.3 By MS/MS 5 0.816 1 1 1 3 250680 250680 0 935 1400 966 2293;2294;2295 1876;1877;1878;1879 1878 4 8572.5 0 ALDYYMLR SDDDPKKGIWLEAGKALDYYMLRNGDTMEY IWLEAGKALDYYMLRNGDTMEYRKKQRPLK K A L L R N 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 8 0 1043.511 Q9Y490 Q9Y490 67 74 TLN1 Talin-1 yes yes 2 0.002021 124.08 By MS/MS 2.33 0.471 2 1 3 798380 798380 0 936 2888 967;968 2296;2297;2298 1880;1881 1881 1196 2 237380 0 ALEATTEHIR KTVKAVEDEATKGTRALEATTEHIRQELAV TKGTRALEATTEHIRQELAVFCSPEPPAKT R A L I R Q 2 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1139.5935 Q9Y490 Q9Y490 2145 2154 TLN1 Talin-1 yes yes 2 7.5662E-05 155.58 By MS/MS 2 0 1 1 428320 428320 0 937 2888 969 2299 1882 1882 1 144880 0 ALEAVFGK GKLFIGGLNTETNEKALEAVFGKYGRIVEV NTETNEKALEAVFGKYGRIVEVLLMKDRET K A L G K Y 2 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 833.4647 P38159 P38159 23 30 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 2 0.021009 98.523 By MS/MS 7 0 1 1 916150 916150 0 938 848 970 2300 1883 1883 1 14382 0 ALEDAFLAIDAK IIKDQKAYKEGKLQKALEDAFLAIDAKLTT LQKALEDAFLAIDAKLTTEEVIKELAQIAG K A L A K L 4 0 0 2 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1275.6711 O15355 O15355 93 104 PPM1G Protein phosphatase 1G yes yes 2 5.6689E-05 185.08 By MS/MS 5.5 0.5 1 1 2 1038200 1038200 0 939 184 971 2301;2302 1884 1884 1 9274.7 0 ALEDMFDALEGK YPGRNAREFLQCVEKALEDMFDALEGKSIK VEKALEDMFDALEGKSIKS___________ K A L G K S 2 0 0 2 0 0 2 1 0 0 2 1 1 1 0 0 0 0 0 0 0 0 12 0 1337.6173 P23786 P23786 643 654 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 2 2.1161E-05 176.48 By MS/MS 5 0 1 1 109530 109530 0 940 710 972 2303 1885;1886 1886 2 1098.6 0 ALEEAANSGGLNLSAR GSGGFNLPLNRGLERALEEAANSGGLNLSA LEEAANSGGLNLSARKLKEFPRTAAPGHDL R A L A R K 4 1 2 0 0 0 2 2 0 0 3 0 0 0 0 2 0 0 0 0 0 0 16 0 1571.7903 Q9Y2L9 Q9Y2L9 66 81 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 yes yes 2 6.0951E-17 264.09 By MS/MS 4 0 1 1 1102200 1102200 0 941 2836 973 2304 1887 1887 1 103730 0 ALEEAMEQKAELER AEAREKETKALSLARALEEAMEQKAELERL RALEEAMEQKAELERLNKQFRTEMEDLMSS R A L E R L 3 1 0 0 0 1 5 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 14 1 1645.7981 P35579 P35579 1484 1497 MYH9 Myosin-9 yes yes 2;3 2.117E-16 265.53 By MS/MS 2 0 2 2 1227200 1227200 0 942 824 974 2305;2306 1888;1889 1889 2 415080 0 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPAEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1300.6511 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550;CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779 CON__P02533 135 146 KRT13;KRT14;KRT16 Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 4.9732E-28 261.35 By MS/MS By MS/MS 5.43 2.82 2 2 2 3 2 2 2 2 2 2 11 10 98487000 46657000 51830000 + 943 39;47;603;51 975 2307;2308;2309;2310;2311;2312;2313;2314;2315;2316;2317;2318;2319;2320;2321;2322;2323;2324;2325;2326;2327 1890;1891;1892;1893;1894;1895;1896;1897;1898;1899;1900;1901;1902;1903;1904;1905;1906;1907;1908;1909;1910;1911;1912;1913 1893 24 3182900 19821000 ALEEAVATGTLNLSNR VPGSPGLPGRRSAERALEEAVATGTLNLSN LEEAVATGTLNLSNRRLKHFPRGAARSYDL R A L N R R 3 1 2 0 0 0 2 1 0 0 3 0 0 0 0 1 2 0 0 1 0 0 16 0 1657.8635 O75427 O75427 37 52 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 2.9418E-15 179.59 By MS/MS 5 0 1 1 660840 660840 0 944 326 976 2328 1914 1914 0 6627.9 0 ALEEELAGLK KDVQDELRIKENELRALEEELAGLKNTAEK ENELRALEEELAGLKNTAEKYRQLKQQWEM R A L L K N 2 0 0 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1071.5812 O95347 O95347 697 706 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0021026 112.11 By MS/MS 3 0 1 1 422440 422440 0 945 405 977 2329 1915 1915 1 7729.5 0 ALEEGLTPQEICDK YLCGTDEYGTATETKALEEGLTPQEICDKY KALEEGLTPQEICDKYHIIHADIYRWFNIS K A L D K Y 1 0 0 1 1 1 3 1 0 1 2 1 0 0 1 0 1 0 0 0 0 0 14 0 1601.7607 P56192 P56192 322 335 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 6.042E-17 264.3 By MS/MS 4 0 1 1 1045500 1045500 0 946 1067 978 2330 1916 1916 1 98392 0 ALEENNNFSK QLAEKREHEREVLQKALEENNNFSKMAEEK EVLQKALEENNNFSKMAEEKLILKMEQIKE K A L S K M 1 0 3 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5411 Q93045 Q93045 120 129 STMN2 Stathmin-2 yes yes 2 0.00034971 135.86 By MS/MS 9 0 1 1 634850 634850 0 947 2087 979 2331 1917;1918 1918 2 12494 0 ALEENNNFSR QLAERREHEREVLHKALEENNNFSRQAEEK EVLHKALEENNNFSRQAEEKLNYKMELSKE K A L S R Q 1 1 3 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1192.5473 Q9NZ72 Q9NZ72 121 130 STMN3 Stathmin-3 yes yes 2 0.00013136 151.83 By MS/MS 9 0 1 1 0 0 0 948 2646 980 2332 1919 1919 1 0 0 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1380.6409 CON__P13645;P13645;CON__P02535-1 CON__P13645 166 177 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.2173E-19 247.96 By MS/MS By MS/MS 5.26 2.59 2 2 4 4 2 5 2 2 2 2 11 16 1162000000 497000000 665000000 + 949 50 981 2333;2334;2335;2336;2337;2338;2339;2340;2341;2342;2343;2344;2345;2346;2347;2348;2349;2350;2351;2352;2353;2354;2355;2356;2357;2358;2359 1920;1921;1922;1923;1924;1925;1926;1927;1928;1929;1930;1931;1932;1933;1934;1935;1936;1937;1938;1939;1940;1941;1942;1943;1944;1945;1946;1947;1948;1949;1950;1951;1952;1953;1954;1955;1956;1957;1958;1959;1960;1961 1950 41 36030000 270580000 ALEESNYELEGKIK QNLNDRLASYLDKVRALEESNYELEGKIKE RALEESNYELEGKIKEWYEKHGNSHQGEPR R A L I K E 1 0 1 0 0 0 4 1 0 1 2 2 0 0 0 1 0 0 1 0 0 0 14 1 1621.8199 CON__P13645;P13645;CON__P02535-1 CON__P13645 166 179 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 2.8178E-13 220.29 By matching By MS/MS 3.5 0.5 2 2 2 2 10221000 1728200 8492300 + 950 50 982 2360;2361;2362;2363 1962;1963 1963 2 162640 1081000 ALEFAPACHR FEKRDFRKVVFCMDRALEFAPACHRFKILK FCMDRALEFAPACHRFKILKAECLAMLGRY R A L H R F 3 1 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1170.5604 Q99615 Q99615 168 177 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.017182 88.177 By MS/MS 6 0 1 1 2652500 2652500 0 951 2253 983 2364 1964 1964 1 18234 0 ALEFGEPVLLVGDTGCGK VWTEGMRRLAMLVGRALEFGEPVLLVGDTG FGEPVLLVGDTGCGKTTICQVFAALANQKL R A L G K T 1 0 0 1 1 0 2 4 0 0 3 1 0 1 1 0 1 0 0 2 0 0 18 0 1860.9291 Q9NU22 Q9NU22 1379 1396 MDN1 Midasin yes yes 2 2.249E-05 198.29 By MS/MS 1.5 0.5 1 1 2 262350 262350 0 952 2580 984 2365;2366 1965;1966 1966 2 74738 0 ALEFIPSDQQNEMVR LSLALQMYGCRVIQKALEFIPSDQQNEMVR ALEFIPSDQQNEMVRELDGHVLKCVKDQNG K A L V R E 1 1 1 1 0 2 2 0 0 1 1 0 1 1 1 1 0 0 0 1 0 0 15 0 1775.8512 Q14671 Q14671 941 955 PUM1 Pumilio homolog 1 yes yes 2 0.022478 81.676 By MS/MS 3 0 1 1 265830 265830 0 953 1448 985 2367 1967 1967 849 1 4863.9 0 ALEGLVYR LTTSEDIERWEAALRALEGLVYRSPTATRE RWEAALRALEGLVYRSPTATREVSVELAKV R A L Y R S 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 1 1 0 0 8 0 919.51272 Q9Y4R8 Q9Y4R8 537 544 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.015404 104.75 By MS/MS 4 0 1 1 2374300 2374300 0 954 2900 986 2368 1968 1968 1 223440 0 ALEHHRSEIQAEQDR QKLEEKRAFDSAVAKALEHHRSEIQAEQDR ALEHHRSEIQAEQDRKIEEVRDAMENEMRT K A L D R K 2 2 0 1 0 2 3 0 2 1 1 0 0 0 0 1 0 0 0 0 0 0 15 1 1817.8769 Q16891 Q16891 452 466 IMMT MICOS complex subunit MIC60 yes yes 3 0.028422 68.044 By MS/MS 4 0 1 1 231630 231630 0 955 1563 987 2369 1969 1969 1 21798 0 ALEIADFSGNPLSR RNDIPEIPESIKFCKALEIADFSGNPLSRL KALEIADFSGNPLSRLPDGFTQLRSLAHLA K A L S R L 2 1 1 1 0 0 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 0 1488.7573 Q14160 Q14160 106 119 SCRIB Protein scribble homolog yes yes 2 0.0010803 151.26 By MS/MS 2 0 1 1 129400 129400 0 956 1425 988 2370 1970;1971 1970 2 43767 0 ALEICQQR LLPFLRDSTHCPLEKALEICQQRNFVEETV THCPLEKALEICQQRNFVEETVYLLSRMGN K A L Q R N 1 1 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1016.5073 P49754 P49754 643 650 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 2 0.0053056 124.08 By MS/MS 4 0 1 1 656500 656500 0 957 960 989 2371 1972 1972 1 61781 0 ALEIYATR QNQGKAEEVEYYYRRALEIYATRLGPDDPN VEYYYRRALEIYATRLGPDDPNVAKTKNNL R A L T R L 2 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 935.50763 Q9H0B6 Q9H0B6 350 357 KLC2 Kinesin light chain 2 yes yes 2 0.018199 101.64 By MS/MS 5 0 1 1 1031900 1031900 0 958 2405 990 2372 1973 1973 1 10350 0 ALELDGQSVK LKMQQHEQALADCRRALELDGQSVKAHFFL ADCRRALELDGQSVKAHFFLGQCQLEMESY R A L V K A 1 0 0 1 0 1 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1058.5608 Q9UNE7 Q9UNE7 86 95 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.001315 117.53 By MS/MS 8 0 1 1 2426500 2426500 0 959 2786 991 2373 1974 1974 1 30634 0 ALELDPNLYR KGFMDGKQACERMIRALELDPNLYRIGQSK ERMIRALELDPNLYRIGQSKIFFRAGVLAH R A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 1 0 0 0 1 0 0 0 10 0 1202.6295 P35580 P35580 753 762 MYH10 Myosin-10 no no 2 0.026564 83.647 By MS/MS 2.5 0.5 1 1 2 1594300 1594300 0 960 825 992 2374;2375 1975 1975 1 464280 0 ALELDSNLYR KGFMDGKQACVLMIKALELDSNLYRIGQSK VLMIKALELDSNLYRIGQSKVFFRAGVLAH K A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 10 0 1192.6088 P35579 P35579 746 755 MYH9 Myosin-9 yes yes 2 5.648E-06 177.3 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 3314500 3226800 87703 961 824 993 2376;2377;2378;2379 1976;1977;1978;1979 1979 4 948220 124030 ALELDSNNEK LKLQAFSAAIESCNKALELDSNNEKGLFRR ESCNKALELDSNNEKGLFRRGEAHLAVNDF K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 8.6738E-06 154.01 By MS/MS 6 0 1 1 3198700 3198700 0 962 1279 994 2380 1980 1980 1 21989 0 ALELTGLK KFGYVDFESAEDLEKALELTGLKVFGNEIK SAEDLEKALELTGLKVFGNEIKLEKPKGKD K A L L K V 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 843.50657 P19338 P19338 363 370 NCL Nucleolin yes yes 2 0.018199 101.64 By MS/MS 4.5 0.5 1 1 2 1381800 1381800 0 963 659 995 2381;2382 1981 1981 1 103860 0 ALENPDTASLLGR RISAQVVDYYKEACRALENPDTASLLGRIQ CRALENPDTASLLGRIQKDWKKLVQMKIYY R A L G R I 2 1 1 1 0 0 1 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 13 0 1355.7045 Q9H3S7 Q9H3S7 220 232 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 2 0.0038282 107.09 By MS/MS 2 0 1 1 397080 397080 0 964 2441 996 2383 1982 1982 1 134310 0 ALENSNYGVR MWTAELENIATLCFKALENSNYGVRVAVSK TLCFKALENSNYGVRVAVSKLLGTVMATAL K A L V R V 1 1 2 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1121.5465 Q9P2D3 Q9P2D3 226 235 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.0014127 132.88 By MS/MS 2 0 1 1 0 0 0 965 2681 997 2384 1983 1983 1 0 0 ALENVLSGKA TNVPLNNFSADQVTRALENVLSGKA_____ DQVTRALENVLSGKA_______________ R A L K A - 2 0 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 1 1000.5553 O43678 O43678 90 99 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 2 2.6254E-07 194.94 By MS/MS By matching 10 0 2 1 1 1987600 1959800 27802 966 225 998 2385;2386 1984 1984 1 105620 35594 ALEQFATVVEAK LVHPELSRSGELAVRALEQFATVVEAKLIK AVRALEQFATVVEAKLIKHKKGIVNEQFLL R A L A K L 3 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1304.6976 P49748 P49748 539 550 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00028065 145.23 By MS/MS 5 0 1 1 1230100 1230100 0 967 959 999 2387 1985 1985 1 12337 0 ALEQKPDDAQYYCQR LIDEDPQAALEELTKALEQKPDDAQYYCQR ALEQKPDDAQYYCQRAYCHILLGNYCVAVA K A L Q R A 2 1 0 2 1 3 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 15 1 1883.8472 Q9Y2Z0 Q9Y2Z0 37 51 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.0021222 166.62 By MS/MS 7 0 1 1 603820 603820 0 968 2850 1000 2388 1986 1986 1 9478.9 0 ALEQLLENNTTR TRTYNPPTDFSGLRRALEQLLENNTTRSPR LRRALEQLLENNTTRSPRHPGVIFKALKAL R A L T R S 1 1 2 0 0 1 2 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 12 0 1400.726 Q9HBF4 Q9HBF4 377 388 ZFYVE1 Zinc finger FYVE domain-containing protein 1 yes yes 2 7.7676E-18 254.07 By MS/MS 4.5 0.5 1 1 2 1519200 1519200 0 969 2503 1001 2389;2390 1987 1987 1 45839 0 ALEQQVEEMK DDVGKSVHELEKSKRALEQQVEEMKTQLEE EKSKRALEQQVEEMKTQLEELEDELQATED R A L M K T 1 0 0 0 0 2 3 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 10 0 1203.5805 P35579 P35579 1529 1538 MYH9 Myosin-9 yes yes 2 0.0013506 119.53 By MS/MS 2 0 1 1 464370 464370 0 970 824 1002 2391 1988 1988 1 157070 0 ALEQQVEEMR DDVGKNVHELEKSKRALEQQVEEMRTQLEE EKSKRALEQQVEEMRTQLEELEDELQATED R A L M R T 1 1 0 0 0 2 3 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 0 1231.5867 P35580 P35580 1536 1545 MYH10 Myosin-10 yes yes 2 0.017432 88.056 By MS/MS 2 0 1 1 510420 510420 0 971 825 1003 2392 1989 1989 1 172650 0 ALESDMAPVLIMATNR EVHMLDIESFSFLNRALESDMAPVLIMATN LESDMAPVLIMATNRGITRIRGTSYQSPHG R A L N R G 3 1 1 1 0 0 1 0 0 1 2 0 2 0 1 1 1 0 0 1 0 0 16 0 1730.8695 Q9Y230 Q9Y230 315 330 RUVBL2 RuvB-like 2 yes yes 2;3 1.1969E-11 296.28 By MS/MS 5.8 0.4 1 4 5 11391000 11391000 0 972 2810 1004;1005 2393;2394;2395;2396;2397 1990;1991;1992;1993 1992 1173;1174 4 80765 0 ALESELQQLR AQLRGALQQGEAFQRALESELQQLRARLQG EAFQRALESELQQLRARLQGLEADCVRGPD R A L L R A 1 1 0 0 0 2 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1185.6354 Q96AQ6 Q96AQ6 326 335 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.00025045 143.7 By MS/MS 4 0 1 1 846780 846780 0 973 2108 1006 2398 1994 1994 1 79687 0 ALESPERPFLAILGGAK AGGFLMKKELNYFAKALESPERPFLAILGG ESPERPFLAILGGAKVADKIQLINNMLDKV K A L A K V 3 1 0 0 0 0 2 2 0 1 3 1 0 1 2 1 0 0 0 0 0 0 17 1 1767.9883 P00558 P00558 200 216 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.034836 64.842 By MS/MS 7 0 1 1 139240 139240 0 974 447 1007 2399 1995 1995 1 2185.8 0 ALESSIAPIVIFASNR EVHMLDIECFTYLHRALESSIAPIVIFASN LESSIAPIVIFASNRGNCVIRGTEDITSPH R A L N R G 3 1 1 0 0 0 1 0 0 3 1 0 0 1 1 3 0 0 0 1 0 0 16 0 1686.9305 Q9Y265 Q9Y265 318 333 RUVBL1 RuvB-like 1 yes yes 2;3 4.9681E-07 209.22 By MS/MS 6.8 0.748 2 2 1 5 9213400 9213400 0 975 2815 1008 2400;2401;2402;2403;2404 1996;1997;1998 1997 3 64558 0 ALETVPKDLR ______________________________ ______________________________ M A L L R H 1 1 0 1 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 10 1 1140.6503 P63272 P63272 2 11 SUPT4H1 Transcription elongation factor SPT4 yes yes 2 0.00019168 128.27 By MS/MS 10 0 1 1 907470 907470 0 976 1204 1009 2405 1999 1999 1 48909 0 ALEVAEYLTPVLK ______________________________ GKALEVAEYLTPVLKESKFKETGVITPEEF K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 Q9NT62 Q9NT62 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 2 0.00042047 139.86 By MS/MS 7 0 1 1 99351 99351 0 977 2574 1010 2406 2000 2000 1 1559.6 0 ALEVSEDVKVSK VTQNVEVPETPKASKALEVSEDVKVSKASG ASKALEVSEDVKVSKASGVSKATEVSKTPE K A L S K A 1 0 0 1 0 0 2 0 0 0 1 2 0 0 0 2 0 0 0 3 0 0 12 1 1302.7031 Q9UNF1 Q9UNF1 48 59 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.00082502 152.64 By MS/MS 5 0 1 1 533950 533950 0 978 2787 1011 2407 2001 2001 1 5355.3 0 ALEVYDLIR SEPGAARQPRIMEEKALEVYDLIRTIRDPE RIMEEKALEVYDLIRTIRDPEKPNTLEELE K A L I R T 1 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1090.6023 Q9H5X1 Q9H5X1 37 45 FAM96A MIP18 family protein FAM96A yes yes 2 0.0020171 121.09 By MS/MS 9.5 0.5 1 1 2 142830 142830 0 979 2455 1012 2408;2409 2002;2003 2002 2 4688.4 0 ALEYTIYNQELNETR KEELAQYQKWDKMRRALEYTIYNQELNETR ALEYTIYNQELNETRAKLDELSAKRETSGE R A L T R A 1 1 2 0 0 1 3 0 0 1 2 0 0 0 0 0 2 0 2 0 0 0 15 0 1855.8952 Q9UQE7 Q9UQE7 222 236 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.0891E-32 296.28 By MS/MS 3 0 1 1 264640 264640 0 980 2807 1013 2410 2004 2004 1 4842.1 0 ALFIVPR CMNMNTKANRKKLVRALFIVPRQRLDLLPF ANRKKLVRALFIVPRQRLDLLPFYARLVAT R A L P R Q 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 7 0 814.50651 Q9HAU5 Q9HAU5 607 613 UPF2 Regulator of nonsense transcripts 2 yes yes 2 0.017982 114.67 By MS/MS 3 0 1 1 239850 239850 0 981 2494 1014 2411 2005 2005 1 4388.5 0 ALFPGDSEIDQLFR IWSLGCIFAEMVTRRALFPGDSEIDQLFRI RALFPGDSEIDQLFRIFRTLGTPDEVVWPG R A L F R I 1 1 0 2 0 1 1 1 0 1 2 0 0 2 1 1 0 0 0 0 0 0 14 0 1606.7991 P24941;Q00526 P24941 201 214 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2 0.027591 79.82 By MS/MS 8 0 1 1 37078 37078 0 982 718 1015 2412 2006 2006 1 468.11 0 ALFQDIK GYERLLKMQNQRGGRALFQDIKKPAEDEWG MQNQRGGRALFQDIKKPAEDEWGKTPDAMK R A L I K K 1 0 0 1 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 0 833.4647 P02792 P02792 77 83 FTL Ferritin light chain yes yes 2 0.048731 90.777 By MS/MS 9 0 1 1 422670 422670 0 983 460 1016 2413 2007 2007 1 8318.2 0 ALFQLSR ADVKEEFVEDAAALKALFQLSRLEERSVLF VEDAAALKALFQLSRLEERSVLFAVASALV K A L S R L 1 1 0 0 0 1 0 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 7 0 833.47594 Q9H3U1 Q9H3U1 573 579 UNC45A Protein unc-45 homolog A yes yes 2 0.017129 116.88 By MS/MS 4.5 0.5 1 1 2 2394300 2394300 0 984 2442 1017 2414;2415 2008 2008 1 198220 0 ALFQNTER LAAAFSSSEVKALIRALFQNTERRAAALAK EVKALIRALFQNTERRAAALAKIK______ R A L E R R 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 8 0 977.49304 O43264 O43264 763 770 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.022839 96.492 By MS/MS 4 0 1 1 4704200 4704200 0 985 200 1018 2416 2009;2010 2010 2 442690 0 ALFSLAPEVEVR CFIGRSNVGKSSLIKALFSLAPEVEVRVSK LIKALFSLAPEVEVRVSKKPGHTKKMNFFK K A L V R V 2 1 0 0 0 0 2 0 0 0 2 0 0 1 1 1 0 0 0 2 0 0 12 0 1329.7293 Q8N3Z3 Q8N3Z3 129 140 GTPBP8 GTP-binding protein 8 yes yes 2 0.00086027 127.76 By MS/MS 8.5 0.5 1 1 2 1655800 1655800 0 986 1913 1019 2417;2418 2011 2011 1 21522 0 ALGAHLEAEPK TALDSHKELNTSSKRALGAHLEAEPKSQRS SSKRALGAHLEAEPKSQRSAVQKPPSTGSA R A L P K S 3 0 0 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 11 0 1134.6033 Q9NUQ3 Q9NUQ3 496 506 TXLNG Gamma-taxilin yes yes 2 0.0077445 96.665 By MS/MS 5.5 0.5 1 1 2 617360 617360 0 987 2584 1020 2419;2420 2012 2012 1 5183.1 0 ALGDLISATK ETQVVLINAVKDVAKALGDLISATKAAAGK KDVAKALGDLISATKAAAGKVGDDPAVWQL K A L T K A 2 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 987.56006 Q9Y490 Q9Y490 2090 2099 TLN1 Talin-1 yes yes 2 0.0002246 145.46 By MS/MS 3 0.816 1 1 1 3 2408600 2408600 0 988 2888 1021 2421;2422;2423 2013;2014 2013 2 553120 0 ALGEPITLFGEGPAER INVSTDDSEVKACLRALGEPITLFGEGPAE LGEPITLFGEGPAERRERLRNILSVVGTDA R A L E R R 2 1 0 0 0 0 3 3 0 1 2 0 0 1 2 0 1 0 0 0 0 0 16 0 1655.8519 O43172 O43172 114 129 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 2 0.00039293 144.28 By MS/MS 7.5 0.5 1 1 2 159690 159690 0 989 194 1022 2424;2425 2015 2015 1 2201.5 0 ALGEYLER RSLERLADLLGKIQKALGEYLERERSSFPR LLGKIQKALGEYLERERSSFPRFYFVGDED K A L E R E 1 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 949.4869 Q14204 Q14204 1614 1621 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0068256 117.04 By MS/MS 1.5 0.5 1 1 2 1514100 1514100 0 990 1433 1023 2426;2427 2016;2017 2016 2 364860 0 ALGEYLERER RSLERLADLLGKIQKALGEYLERERSSFPR GKIQKALGEYLERERSSFPRFYFVGDEDLL K A L E R S 1 2 0 0 0 0 3 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 1 1234.6306 Q14204 Q14204 1614 1623 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.028158 104.01 By MS/MS 1.5 0.5 1 1 2 979860 979860 0 991 1433 1024 2428;2429 2018 2018 1 291940 0 ALGGEDVR AEKQYGFCKGSVIQKALGGEDVRVTCTLFQ KGSVIQKALGGEDVRVTCTLFQTQPVIPQP K A L V R V 1 1 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 815.41373 CON__P12763 CON__P12763 238 245 yes yes 2 0.0060873 120.46 By MS/MS 6 0.816 1 1 1 3 11641000 11641000 0 + 992 49 1025 2430;2431;2432 2019;2020;2021 2020 3 104920 0 ALGHQLGR SPFGPAGTGKTESVKALGHQLGRFVLVFNC GKTESVKALGHQLGRFVLVFNCDETFDFQA K A L G R F 1 1 0 0 0 1 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 850.47733 Q14204 Q14204 1918 1925 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0032791 133.47 By MS/MS 2 0.816 1 1 1 3 1657600 1657600 0 993 1433 1026 2433;2434;2435 2022;2023 2022 2 387260 0 ALGLEESLVQEGR KAMEEKLEALLEKTKALGLEESLVQEGRAR TKALGLEESLVQEGRAREQEEKYWRGQDVV K A L G R A 1 1 0 0 0 1 3 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 13 0 1399.7307 P78559 P78559 1620 1632 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes yes 2 0.0010497 125.23 By MS/MS 1 0 1 1 198480 198480 0 994 1227 1027 2436 2024 2024 1 47828 0 ALGLNENDYK LARLDPRLFCKALFKALGLNENDYKFGLTK KALFKALGLNENDYKFGLTKVFFRPGKFAE K A L Y K F 1 0 2 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1135.551 Q9UM54 Q9UM54 741 750 MYO6 Unconventional myosin-VI yes yes 2 0.0055163 104.42 By MS/MS 3 0 1 1 680400 680400 0 995 2781 1028 2437 2025 2025 1 12450 0 ALGLVIR GVLTGSPEQKEEAAKALGLVIRLTSADALR EQKEEAAKALGLVIRLTSADALRPSVVSIT K A L I R L 1 1 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 740.49086 Q92616 Q92616 2286 2292 GCN1L1 Translational activator GCN1 yes yes 2 0.013605 126.05 By MS/MS 3 0.816 1 1 1 3 1779900 1779900 0 996 2064 1029 2438;2439;2440 2026;2027 2026 2 450400 0 ALGQNPTNAEVLK GDGKILYSQCGDVMRALGQNPTNAEVLKVL MRALGQNPTNAEVLKVLGNPKSDEMNVKVL R A L L K V 2 0 2 0 0 1 1 1 0 0 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1353.7252 P60660;P14649 P60660 38 50 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 2 7.9055E-09 197.73 By MS/MS By MS/MS 10 0 2 1 1 10371000 10122000 248310 997 1094 1030 2441;2442 2028;2029 2028 2 545550 317900 ALGSEVQDASK EEMEVRSVVADTDQKALGSEVQDASKVTTQ TDQKALGSEVQDASKVTTQIDKEKKEIPVS K A L S K V 2 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1103.5459 Q9H2G2 Q9H2G2 664 674 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0079533 96.113 By MS/MS 2 0 1 1 1037200 1037200 0 998 2429 1031 2443 2030 2030 1 350820 0 ALGTEVIQLFPEK FLGSELACALGRKARALGTEVIQLFPEKGN ARALGTEVIQLFPEKGNMGKILPEYLSNWT R A L E K G 1 0 0 0 0 1 2 1 0 1 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1443.7973 O95831 O95831 325 337 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 4.3441E-08 244.95 By MS/MS 6 0.816 1 1 1 3 11077000 11077000 0 999 429 1032 2444;2445;2446 2031;2032;2033 2031 3 102680 0 ALGTEVIQLFPEKGNMGK FLGSELACALGRKARALGTEVIQLFPEKGN TEVIQLFPEKGNMGKILPEYLSNWTMEKVR R A L G K I 1 0 1 0 0 1 2 3 0 1 2 2 1 1 1 0 1 0 0 1 0 0 18 1 1931.0186 O95831 O95831 325 342 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 2.2581E-09 234.9 By MS/MS 5.33 0.471 2 1 3 5946100 5946100 0 1000 429 1033 2447;2448;2449 2034;2035;2036;2037 2035 161 4 57012 0 ALGTLVSHVTLR PFLSLAACVMPSRLKALGTLVSHVTLRLLK RLKALGTLVSHVTLRLLKPECVLDKSWCQE K A L L R L 1 1 0 0 0 0 0 1 1 0 3 0 0 0 0 1 2 0 0 2 0 0 12 0 1265.7456 Q92616 Q92616 915 926 GCN1L1 Translational activator GCN1 yes yes 2 0.00015985 153.1 By MS/MS 2 0 1 1 424920 424920 0 1001 2064 1034 2450 2038 2038 1 143730 0 ALGVAVGGGVDGSR LLFRASVKTVKTRNKALGVAVGGGVDGSRD KALGVAVGGGVDGSRDELFRRSPRPKGDFS K A L S R D 2 1 0 1 0 0 0 5 0 0 1 0 0 0 0 1 0 0 0 3 0 0 14 0 1213.6415 Q9P2W9 Q9P2W9 22 35 STX18 Syntaxin-18 yes yes 2 0.040094 72.096 By MS/MS 7 0 1 1 1417000 1417000 0 1002 2691 1035 2451 2039 2039 1 22245 0 ALGVTEDRLR NVKELQAACRARGMRALGVTEDRLRGQLKQ ARGMRALGVTEDRLRGQLKQWLDLHLHQEI R A L L R G 1 2 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 1 1128.6251 O95202 O95202 386 395 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.0072677 113.26 By MS/MS 4.5 0.5 1 1 2 1514900 1514900 0 1003 394 1036 2452;2453 2040 2040 1 40223 0 ALHDQSQELQDAAGHR LILGLRRCCLWTELKALHDQSQELQDAAGH LHDQSQELQDAAGHRQLLLRELQAKQQRIL K A L H R Q 3 1 0 2 0 3 1 1 2 0 2 0 0 0 0 1 0 0 0 0 0 0 16 0 1774.8347 O94927 O94927 357 372 HAUS5 HAUS augmin-like complex subunit 5 yes yes 3 0.012279 115.58 By MS/MS 5 0 1 1 1642700 1642700 0 1004 377 1037 2454 2041 2041 1 16476 0 ALHHGIDLEK SGAQRIHDPQLLTERALHHGIDLEKIKAYI LLTERALHHGIDLEKIKAYIDSFRFGAPPH R A L E K I 1 0 0 1 0 0 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1131.6037 P14868 P14868 442 451 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.002724 109.66 By MS/MS 6 0 1 1 3060800 3060800 0 1005 620 1038 2455 2042 2042 1 21041 0 ALHHGIDLEKIK SGAQRIHDPQLLTERALHHGIDLEKIKAYI TERALHHGIDLEKIKAYIDSFRFGAPPHAG R A L I K A 1 0 0 1 0 0 1 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0 12 1 1372.7827 P14868 P14868 442 453 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.032196 103.21 By MS/MS 6 0 1 1 3273600 3273600 0 1006 620 1039 2456 2043 2043 1 22503 0 ALIAAQYSGAQVR AGTLYTYPENWRAFKALIAAQYSGAQVRVL FKALIAAQYSGAQVRVLSAPPHFHFGQTNR K A L V R V 4 1 0 0 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 13 0 1346.7306 P26641 P26641 18 30 EEF1G Elongation factor 1-gamma yes yes 2 1.6739E-07 204.56 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 50526000 50428000 98264 1007 736 1040 2457;2458;2459;2460;2461;2462 2044;2045 2045 2 472260 100690 ALIAGGGAPEIELALR IHDALCVIRCLVKKRALIAGGGAPEIELAL LIAGGGAPEIELALRLTEYSRTLSGMESYC R A L L R L 4 1 0 0 0 0 2 3 0 2 3 0 0 0 1 0 0 0 0 0 0 0 16 0 1549.8828 P50991 P50991 420 435 CCT4 T-complex protein 1 subunit delta yes yes 2;3 5.7296E-05 214.42 By MS/MS By MS/MS 7 1.8 1 3 1 1 1 1 7 1 101100000 101010000 95846 1008 985 1041 2463;2464;2465;2466;2467;2468;2469;2470 2046;2047;2048;2049;2050;2051;2052;2053;2054 2051 9 740700 98214 ALIDTLLDGYETAR LDLRNTSTPFKGVRKALIDTLLDGYETARY KALIDTLLDGYETARYGTGVFGQNEYLRYQ K A L A R Y 2 1 0 2 0 0 1 1 0 1 3 0 0 0 0 0 2 0 1 0 0 0 14 0 1549.7988 Q9BWL3 Q9BWL3 152 165 C1orf43 Uncharacterized protein C1orf43 yes yes 2 3.2646E-05 193.22 By MS/MS 8 0 1 1 48592 48592 0 1009 2351 1042 2471 2055;2056 2055 2 613.47 0 ALIESLNQKPQTAGDQPPPTDTTHATHR FLEKAQRLYPTPRVRALIESLNQKPQTAGD GDQPPPTDTTHATHRKAGGTDAPSANGEAG R A L H R K 3 1 1 2 0 3 1 1 2 1 2 1 0 0 4 1 5 0 0 0 0 0 28 1 3023.5061 Q9NXW2 Q9NXW2 45 72 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 4 0.012875 52.192 By MS/MS 7 0 1 1 2174400 2174400 0 1010 2630 1043 2472 2057 2057 1 34134 0 ALIESYQNLTR ELQMLLEEEIPSGKRALIESYQNLTRVADY SGKRALIESYQNLTRVADYCENNYIQATDK R A L T R V 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 11 0 1306.6881 Q8IZP0 Q8IZP0 18 28 ABI1 Abl interactor 1 yes yes 2 0.00021388 141.91 By MS/MS 5.5 0.5 1 1 2 1638700 1638700 0 1011 1894 1044 2473;2474 2058 2058 1 14367 0 ALIGATNPADAPPGTIR VAMVWQGLDVVRTSRALIGATNPADAPPGT IGATNPADAPPGTIRGDFCIEVGKNLIHGS R A L I R G 4 1 1 1 0 0 0 2 0 2 1 0 0 0 3 0 2 0 0 0 0 0 17 0 1633.8788 Q13232 Q13232 106 122 NME3 Nucleoside diphosphate kinase 3 yes yes 2 2.5324E-07 243.3 By MS/MS 9.5 0.5 1 1 2 722230 722230 0 1012 1366 1045 2475;2476 2059;2060 2059 1 28266 0 ALIGQEGDPDLK GKKLIIVASQAMRYRALIGQEGDPDLKLPD RYRALIGQEGDPDLKLPDFSYCILERLGRS R A L L K L 1 0 0 2 0 1 1 2 0 1 2 1 0 0 1 0 0 0 0 0 0 0 12 0 1254.6456 Q12789 Q12789 161 172 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0043726 105.4 By MS/MS 2 0 1 1 313580 313580 0 1013 1328 1046 2477 2061 2061 1 106070 0 ALINPFAPSRMPMK ESMLHVRPGGYTPQRALINPFAPSRMPMKL RALINPFAPSRMPMKLTSNRRRWMHTFPVG R A L M K L 2 1 1 0 0 0 0 0 0 1 1 1 2 1 3 1 0 0 0 0 0 0 14 1 1571.8316 O75140 O75140 596 609 DEPDC5 DEP domain-containing protein 5 yes yes 3 0.04185 62.14 By MS/MS 5 0 1 1 436880 436880 0 1014 295 1047 2478 2062 2062 127 0 4381.7 0 ALIPLALEGTDVGQTK EVEDRGTVVAQGGGRALIPLALEGTDVGQT LIPLALEGTDVGQTKAAQALAKLTITSNPE R A L T K A 2 0 0 1 0 1 1 2 0 1 3 1 0 0 1 0 2 0 0 1 0 0 16 0 1624.9036 Q9H3U1 Q9H3U1 692 707 UNC45A Protein unc-45 homolog A yes yes 2 1.7955E-08 225.33 By MS/MS 6 1.41 1 1 1 1 1 5 7988800 7988800 0 1015 2442 1048 2479;2480;2481;2482;2483 2063;2064;2065;2066;2067;2068 2064 6 524920 0 ALISPFDVIK FQVAVAGSVSGLVTRALISPFDVIKIRFQL GLVTRALISPFDVIKIRFQLQHERLSRSDP R A L I K I 1 0 0 1 0 0 0 0 0 2 1 1 0 1 1 1 0 0 0 1 0 0 10 0 1101.6434 Q9HC21 Q9HC21 31 40 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0074936 96.668 By MS/MS 8 0 1 1 2002400 2002400 0 1016 2509 1049 2484 2069 2069 1 25280 0 ALIVVQQGMTPSAK IKVYCQRMQEENITRALIVVQQGMTPSAKQ RALIVVQQGMTPSAKQSLVDMAPKYILEQF R A L A K Q 2 0 0 0 0 2 0 1 0 1 1 1 1 0 1 1 1 0 0 2 0 0 14 0 1441.7963 P19388 P19388 102 115 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 2.7858E-07 211.37 By MS/MS 8 0 1 1 1205400 1205400 0 1017 661 1050 2485 2070 2070 333 1 15218 0 ALKASAPAPGHH GFIVYKIRAADKRSKALKASAPAPGHH___ RSKALKASAPAPGHH_______________ K A L H H - 4 0 0 0 0 0 0 1 2 0 1 1 0 0 2 1 0 0 0 0 0 0 12 1 1155.6149 P56378 P56378 47 58 MP68 6.8 kDa mitochondrial proteolipid yes yes 3 0.013255 110.53 By MS/MS 10 0 1 1 223730 223730 0 1018 1070 1051 2486 2071 2071 1 12058 0 ALKDAAEHR RKVHEARAGVLAERKALKDAAEHRELMAWN VLAERKALKDAAEHRELMAWNQAENRRLHE K A L H R E 3 1 0 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1009.5305 Q9BYN8 Q9BYN8 95 103 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 3 0.028252 104.42 By MS/MS 8.5 0.5 1 1 2 663430 663430 0 1019 2374 1052 2487;2488 2072 2072 1 10450 0 ALKDYALEK ______________________________ ______________________________ M A L E K E 2 0 0 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 9 1 1049.5757 P33993 P33993 2 10 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.002469 114.4 By MS/MS 4.5 0.5 1 1 2 3567400 3567400 0 1020 808 1053 2489;2490 2073;2074 2074 2 154600 0 ALKLNSNEAR ELQAYPALVVEKMLKALKLNSNEARLKFPR EKMLKALKLNSNEARLKFPRLLQIIERYPE K A L A R L 2 1 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 1 1114.6095 P78527 P78527 3453 3462 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.021865 106.88 By MS/MS 1 0 1 1 233430 233430 0 1021 1225 1054 2491 2075 2075 1 56250 0 ALLAEGVILR LGETDEEKLFVETGKALLAEGVILRRVGEA VETGKALLAEGVILRRVGEARTQHGGSHVS K A L L R R 2 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1053.6546 Q9Y3D9 Q9Y3D9 124 133 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00020475 146.81 By MS/MS By matching 9.33 0.471 2 1 2 1 10898000 10865000 33601 1022 2875 1055 2492;2493;2494 2076;2077 2076 2 215580 76620 ALLAEGVILRR LGETDEEKLFVETGKALLAEGVILRRVGEA ETGKALLAEGVILRRVGEARTQHGGSHVSR K A L R R V 2 2 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 11 1 1209.7557 Q9Y3D9 Q9Y3D9 124 134 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.0031597 106.68 By MS/MS 9 0 1 1 3478300 3478300 0 1023 2875 1056 2495 2078 2078 1 68453 0 ALLAMYTNQAEQCR FKLSKKQLQAIEFNKALLAMYTNQAEQCRK KALLAMYTNQAEQCRKISASLQSQSPEHLL K A L C R K 3 1 1 0 1 2 1 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 14 0 1667.776 O76094 O76094 311 324 SRP72 Signal recognition particle subunit SRP72 yes yes 2 2.4475E-18 270.56 By MS/MS 5 0 2 2 2636600 2636600 0 1024 362 1057;1058 2496;2497 2079;2080 2080 146 2 26444 0 ALLANALTSALR LPLLGLHEAASFYQRALLANALTSALRLHQ YQRALLANALTSALRLHQRLPHFQLSRAFL R A L L R L 4 1 1 0 0 0 0 0 0 0 4 0 0 0 0 1 1 0 0 0 0 0 12 0 1212.719 P57088 P57088 58 69 TMEM33 Transmembrane protein 33 yes yes 2 1.3116E-08 211.86 By MS/MS 7.67 2.62 1 2 2 1 6 6647100 6647100 0 1025 1078 1059 2498;2499;2500;2501;2502;2503 2081;2082;2083;2084;2085;2086 2084 6 138710 0 ALLAPLVAPEAGEAEPGSQER KAVIQGLETLRGEHRALLAPLVAPEAGEAE VAPEAGEAEPGSQERCILLRRSLEAIELGL R A L E R C 5 1 0 0 0 1 4 2 0 0 3 0 0 0 3 1 0 0 0 1 0 0 21 0 2104.08 Q9H0B6 Q9H0B6 37 57 KLC2 Kinesin light chain 2 yes yes 2 1.2777E-05 146.84 By MS/MS 5 0 1 1 3555900 3555900 0 1026 2405 1060 2504 2087 2087 1 35664 0 ALLDASETTSTR NRKVEQLQQEYTEMKALLDASETTSTRKIK EMKALLDASETTSTRKIKEEEKRVNSKFDT K A L T R K 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 3 0 0 0 0 0 12 0 1263.6307 Q14258 Q14258 250 261 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0013028 119.53 By MS/MS 1 0 1 1 198370 198370 0 1027 1437 1061 2505 2088 2088 1 47800 0 ALLEAGALPNAPNSYGR WLATAAARGRVEEVRALLEAGALPNAPNSY LEAGALPNAPNSYGRRPIQVMMMGSARVAE R A L G R R 4 1 2 0 0 0 1 2 0 0 3 0 0 0 2 1 0 0 1 0 0 0 17 0 1712.8846 P42771 P42771 30 46 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 2 0.00026139 139.64 By MS/MS 9.5 0.5 1 1 2 1247200 1247200 0 1028 889 1062 2506;2507 2089;2090 2089 2 39228 0 ALLEEYNK IQQQDQCVEITEESKALLEEYNKTTMLLSK EITEESKALLEEYNKTTMLLSKQFVQWDEL K A L N K T 1 0 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 8 0 978.50221 O75935 O75935 149 156 DCTN3 Dynactin subunit 3 yes yes 2 0.023515 95.741 By MS/MS 9 0 1 1 1093600 1093600 0 1029 355 1063 2508 2091 2091 1 21523 0 ALLEFAQGR PCPPHFNHLGSDVARALLEFAQGRPLGPHG GSDVARALLEFAQGRPLGPHGLDWLKIHLV R A L G R P 2 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1003.5451 O00411 O00411 823 831 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00029391 153.04 By MS/MS 3.5 0.5 1 1 2 383330 383330 0 1030 104 1064 2509;2510 2092 2092 1 13176 0 ALLEIIMK FLQKAEKLYPLPSARALLEIIMKNGSTAGN YPLPSARALLEIIMKNGSTAGNSPHCRKPS R A L M K N 1 0 0 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 0 0 0 0 8 0 929.56198 Q8TBM8 Q8TBM8 45 52 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.018879 100.19 By MS/MS 7 0 1 1 262900 262900 0 1031 1984 1065 2511 2093 2093 966 1 4127.1 0 ALLEMAEEK KETTMYRSRWESSNKALLEMAEEKTVRDKE WESSNKALLEMAEEKTVRDKELEGLQVKIQ K A L E K T 2 0 0 0 0 0 3 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 9 0 1032.5161 P40222 P40222 442 450 TXLNA Alpha-taxilin yes yes 2 0.00078147 138.06 By MS/MS 5 0 1 1 1976000 1976000 0 1032 857 1066 2512 2094 2094 1 19819 0 ALLEVVQSGGK EAIETDDLTIKLVIKALLEVVQSGGKNIEL LVIKALLEVVQSGGKNIELAVMRRDQSLKI K A L G K N 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1099.6237 O14818;Q8TAA3 O14818 194 204 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 2 0.00046517 132.25 By MS/MS By MS/MS 6 2.16 1 1 1 2 1 8845100 8715900 129200 1033 140 1067 2513;2514;2515 2095;2096 2096 2 110710 16445 ALLFIPR LAVKHFSVEGQLEFRALLFIPRRAPFDLFE VEGQLEFRALLFIPRRAPFDLFENKKKKNN R A L P R R 1 1 0 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 7 0 828.52216 P08238 P08238 331 337 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.023145 109.88 By MS/MS 4 2 1 1 1 1 1 1 1 7 33910000 33910000 0 1034 521 1068 2516;2517;2518;2519;2520;2521;2522 2097;2098;2099;2100;2101;2102 2099 6 2547600 0 ALLFVPR LAVKHFSVEGQLEFRALLFVPRRAPFDLFE VEGQLEFRALLFVPRRAPFDLFENRKKKNN R A L P R R 1 1 0 0 0 0 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 7 0 814.50651 P07900 P07900 339 345 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.01564 120.76 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 32369000 32369000 0 1035 513 1069 2523;2524;2525;2526;2527;2528;2529;2530 2103;2104;2105 2105 3 2637700 0 ALLIFLEK GDSTEFMGVNMDVIRALLIFLEKRLHKTHR VNMDVIRALLIFLEKRLHKTHRLKESVAPV R A L E K R 1 0 0 0 0 0 1 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 8 0 945.5899 Q9NPQ8 Q9NPQ8 312 319 RIC8A Synembryn-A yes yes 2 0.032507 89.142 By MS/MS 5 0 1 1 122000 122000 0 1036 2535 1070 2531 2106;2107 2106 2 1223.6 0 ALLLDALR NTLGQVGTPGTKDPRALLLDALRSPGLRAL PGTKDPRALLLDALRSPGLRALEAGTAVEL R A L L R S 2 1 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 883.5491 Q8N2G8 Q8N2G8 184 191 GHDC GH3 domain-containing protein yes yes 2 0.018484 101.33 By MS/MS 6.5 0.5 1 1 2 3059200 3059200 0 1037 1908 1071 2532;2533 2108 2108 1 21758 0 ALLLLQR AEKDPDEDCRTLALRALLLLQRLKNRLLPP DCRTLALRALLLLQRLKNRLLPPASP____ R A L Q R L 1 1 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 825.54362 Q9Y4R8 Q9Y4R8 820 826 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.02707 130.84 By MS/MS 4 0 1 1 0 0 0 1038 2900 1072 2534 2109 2109 1 0 0 ALLLTGDFSQAGNK MRTESNLGAKVFFFKALLLTGDFSQAGNKG KALLLTGDFSQAGNKGHHVWVTKDELGDYL K A L N K G 2 0 1 1 0 1 0 2 0 0 3 1 0 1 0 1 1 0 0 0 0 0 14 0 1433.7514 Q9H2W6 Q9H2W6 236 249 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 1.5921E-05 236.22 By MS/MS 7.5 0.5 1 1 2 2566100 2566100 0 1039 2435 1073 2535;2536 2110;2111 2110 2 33079 0 ALLNVVDNAR APPPLCPSGRTPDLKALLNVVDNARSFIYV TPDLKALLNVVDNARSFIYVAVMNYLPTLE K A L A R S 2 1 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 10 0 1083.6037 Q8IV08 Q8IV08 310 319 PLD3 Phospholipase D3 yes yes 2 1.4691E-07 187.22 By MS/MS 5 0 1 1 2046700 2046700 0 1040 1862 1074 2537 2112 2112 1 20527 0 ALLPVLAK LVRKKSKLGDLEGAKALLPVLAKRGLVPNL GDLEGAKALLPVLAKRGLVPNLQTFCNLAI K A L A K R 2 0 0 0 0 0 0 0 0 0 3 1 0 0 1 0 0 0 0 1 0 0 8 0 823.55312 O75127 O75127 541 548 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.036602 87.582 By MS/MS 5 0 1 1 661450 661450 0 1041 293 1075 2538 2113 2113 1 6634 0 ALLQEFDNAVLSK QMMIDEFNKQSNAFKALLQEFDNAVLSKEN FKALLQEFDNAVLSKENHMQGKLNEKEKMI K A L S K E 2 0 1 1 0 1 1 0 0 0 3 1 0 1 0 1 0 0 0 1 0 0 13 0 1446.7718 Q02241 Q02241 524 536 KIF23 Kinesin-like protein KIF23 yes yes 2 0.00085853 128.68 By MS/MS 4 0 1 1 160630 160630 0 1042 1276 1076 2539 2114 2114 1 15117 0 ALLQQQPEDDSK TAIKRNENMAKGLQRALLQQQPEDDSKRSP LQRALLQQQPEDDSKRSPRPQDLIRLYDII R A L S K R 1 0 0 2 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 0 1370.6678 Q9UHB9 Q9UHB9 405 416 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.001083 123.62 By MS/MS 5 0 1 1 1426200 1426200 0 1043 2728 1077 2540 2115 2115 1 14305 0 ALLQQQPEDDSKR TAIKRNENMAKGLQRALLQQQPEDDSKRSP QRALLQQQPEDDSKRSPRPQDLIRLYDIIL R A L K R S 1 1 0 2 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 13 1 1526.7689 Q9UHB9 Q9UHB9 405 417 SRP68 Signal recognition particle subunit SRP68 yes yes 2;3 0.00039989 174.57 By MS/MS By matching 5 0 3 2 1 11775000 11725000 50507 1044 2728 1078 2541;2542;2543 2116;2117 2117 2 117590 42415 ALLSSGAVLYK VYFCFKSEPWITKPRALLSSGAVLYKACSV TKPRALLSSGAVLYKACSVIFPLIYSEMKY R A L Y K A 2 0 0 0 0 0 0 1 0 0 3 1 0 0 0 2 0 0 1 1 0 0 11 0 1120.6492 Q14534 Q14534 546 556 SQLE Squalene monooxygenase yes yes 2 0.016816 87.308 By MS/MS 5.5 0.5 1 1 2 1631500 1631500 0 1045 1442 1079 2544;2545 2118 2118 1 12490 0 ALLTSGTSDPR GIRWGRRPRLTPDLRALLTSGTSDPRARVT PDLRALLTSGTSDPRARVTYGTPSLWARLS R A L P R A 1 1 0 1 0 0 0 1 0 0 2 0 0 0 1 2 2 0 0 0 0 0 11 0 1116.5775 O43464 O43464 37 47 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 0.0050144 103.88 By MS/MS 10 0 1 1 288960 288960 0 1046 212 1080 2546 2119 2119 1 15574 0 ALMGLYHGQVLCK ESQKFGELVMTKESKALMGLYHGQVLCKKN SKALMGLYHGQVLCKKNKFGAPQKDVKHLA K A L C K K 1 0 0 0 1 1 0 2 1 0 3 1 1 0 0 0 0 0 1 1 0 0 13 0 1488.7581 P40939 P40939 338 350 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.022011 79.07 By MS/MS 5 0 1 1 1382900 1382900 0 1047 865 1081 2547 2120 2120 446 1 13870 0 ALMGSPQLVAAVVR AMIVNQLSKKEASRRALMGSPQLVAAVVRT RALMGSPQLVAAVVRTMQNTSDLDTARCTT R A L V R T 3 1 0 0 0 1 0 1 0 0 2 0 1 0 1 1 0 0 0 3 0 0 14 0 1410.8017 P14923 P14923 178 191 JUP Junction plakoglobin yes yes 2 3.4913E-09 189.57 By MS/MS By MS/MS 4.8 3.25 2 1 1 2 1 1 2 4 6 4856200 2339700 2516600 1048 621 1082 2548;2549;2550;2551;2552;2553;2554;2555;2556;2557 2121;2122;2123;2124;2125;2126;2127;2128;2129;2130 2123 294 10 182280 1064500 ALMLQGVDLLADAVAVTMGPK TRAYAKDVKFGADARALMLQGVDLLADAVA VDLLADAVAVTMGPKGRTVIIEQSWGSPKV R A L P K G 4 0 0 2 0 1 0 2 0 0 4 1 2 0 1 0 1 0 0 3 0 0 21 0 2112.1323 P10809 P10809 38 58 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.00012949 124.25 By MS/MS 6 0 1 1 68917 68917 0 1049 569 1083 2558 2131 2131 245;246 1 473.75 0 ALNDKLYEK NPEKDFAPLTPNIVRALNDKLYEKRKVAAL TPNIVRALNDKLYEKRKVAALEIEKLVREF R A L E K R 1 0 1 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 9 1 1092.5815 Q08AM6 Q08AM6 17 25 VAC14 Protein VAC14 homolog yes yes 2 0.0079635 126.24 By MS/MS 4 0 1 1 365750 365750 0 1050 1316 1084 2559 2132 2132 1 34420 0 ALNEACESVIQTACK LIQETDPGADYRIDRALNEACESVIQTACK ALNEACESVIQTACKHIRSGDPMILSCLME R A L C K H 3 0 1 0 2 1 2 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 15 0 1692.7811 Q92896 Q92896 502 516 GLG1 Golgi apparatus protein 1 yes yes 2 6.8791E-18 289.86 By MS/MS 3.5 0.5 1 1 2 616690 616690 0 1051 2076 1085 2560;2561 2133 2133 1 35027 0 ALNHEIEELEK IKLQEELSENDKKIKALNHEIEELEKRKDK KKIKALNHEIEELEKRKDKETGGILRSLED K A L E K R 1 0 1 0 0 0 4 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1323.667 O95347 O95347 276 286 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.03951 84.31 By MS/MS 3 0 1 1 0 0 0 1052 405 1086 2562 2134 2134 1 0 0 ALNILQSTNMAFGK GMKALVTLSSGDMRRALNILQSTNMAFGKV RALNILQSTNMAFGKVTEETVYTCTGHPLK R A L G K V 2 0 2 0 0 1 0 1 0 1 2 1 1 1 0 1 1 0 0 0 0 0 14 0 1506.7864 P40937 P40937 216 229 RFC5 Replication factor C subunit 5 yes yes 2 5.8546E-05 184.44 By MS/MS 7 0 1 1 429740 429740 0 1053 863 1087 2563 2135 2135 444 1 6746.2 0 ALNQGTR LLSGLLDAFDGHAARALNQGTRFGAMLDML AFDGHAARALNQGTRFGAMLDMLTDRCSTM R A L T R F 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 758.4035 O14735 O14735 56 62 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 0.013515 126.28 By MS/MS 9 0.816 1 1 1 3 2722700 2722700 0 1054 135 1088 2564;2565;2566 2136 2136 1 49661 0 ALNSMGQDLERPLELR IVDREVTPFFIIYCRALNSMGQDLERPLEL LNSMGQDLERPLELRVRVLDINDNPPVFSM R A L L R V 1 2 1 1 0 1 2 1 0 0 4 0 1 0 1 1 0 0 0 0 0 0 16 1 1840.9465 Q02413 Q02413 129 144 DSG1 Desmoglein-1 yes yes 2;3 2.2908E-09 187.62 By MS/MS By MS/MS 5.83 2.85 1 2 2 1 1 1 1 1 2 3 9 6604200 2724000 3880300 1055 1277 1089 2567;2568;2569;2570;2571;2572;2573;2574;2575;2576;2577;2578 2137;2138;2139;2140 2138 760 3 248210 1242900 ALPAVQQNNLDEDLIR DAAELVALAQAVNARALPAVQQNNLDEDLI LPAVQQNNLDEDLIRKLAYVAAGDLAPINA R A L I R K 2 1 2 2 0 2 1 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 16 0 1807.9428 P22314 P22314 369 384 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 0.0003559 133.98 By MS/MS 4.5 0.5 1 1 2 2291600 2291600 0 1056 691 1090 2579;2580 2141;2142 2142 2 192630 0 ALPSEELNR VEYTLGEESEAPGQRALPSEELNRQLEKLL EAPGQRALPSEELNRQLEKLLKEGSSNQRV R A L N R Q 1 1 1 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 9 0 1027.5298 Q04637 Q04637 1437 1445 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0024578 115.49 By MS/MS 2 0 1 1 22176000 22176000 0 1057 1291 1091 2581 2143 2143 1 7500700 0 ALPSEELNRQLEK VEYTLGEESEAPGQRALPSEELNRQLEKLL QRALPSEELNRQLEKLLKEGSSNQRVFDWI R A L E K L 1 1 1 0 0 1 3 0 0 0 3 1 0 0 1 1 0 0 0 0 0 0 13 1 1525.81 Q04637 Q04637 1437 1449 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0018557 126.66 By MS/MS 2.5 1.12 1 1 1 1 4 10943000 10943000 0 1058 1291 1092 2582;2583;2584;2585 2144;2145;2146;2147 2145 4 2867400 0 ALPSQGLSSSAVLEK SKNMSFLKVDKEYVKALPSQGLSSSAVLEK ALPSQGLSSSAVLEKLKEYSSMDAFWQEGR K A L E K L 2 0 0 0 0 1 1 1 0 0 3 1 0 0 1 4 0 0 0 1 0 0 15 0 1485.8039 O95470 O95470 115 129 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.00035235 136.6 By MS/MS 6 0 1 1 5933800 5933800 0 1059 413 1093 2586 2148 2148 1 40790 0 ALQAAIQQLAEAQPEATAK FCLTLHRYRDAASRRALQAAIQQLAEAQPE AIQQLAEAQPEATAKNLLHSLQSSGIGSKA R A L A K N 7 0 0 0 0 4 2 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 19 0 1951.0375 Q92616 Q92616 69 87 GCN1L1 Translational activator GCN1 yes yes 2;3 1.7068E-11 278.85 By MS/MS 2.8 1.47 1 2 1 1 5 2814900 2814900 0 1060 2064 1094 2587;2588;2589;2590;2591 2149;2150;2151 2149 3 635910 0 ALQAQEIECR INLRRRQDRRERMLRALQAQEIECRLVEAV ERMLRALQAQEIECRLVEAVDGKAMNTSQV R A L C R L 2 1 0 0 1 2 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1216.587 Q8NBJ5 Q8NBJ5 361 370 COLGALT1 Procollagen galactosyltransferase 1 yes yes 2 0.00031403 139.38 By MS/MS By matching 5 0 2 1 1 1297800 1260100 37630 1061 1939 1095 2592;2593 2152 2152 1 12638 31601 ALQDPALALR VDDALERQSPEALLKALQDPALALRGVRRD EALLKALQDPALALRGVRRDFADWYLEQLN K A L L R G 3 1 0 1 0 1 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1066.6135 Q86VI3 Q86VI3 315 324 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 2 0.029038 85.29 By MS/MS 2.5 0.5 1 1 2 499140 499140 0 1062 1830 1096 2594;2595 2153 2153 0 67768 0 ALQEGDLASSR EFLVNHMDLAKGHIKALQEGDLASSRGIEA GHIKALQEGDLASSRGIEACTNAADALLQC K A L S R G 2 1 0 1 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1145.5677 Q9NV70 Q9NV70 289 299 EXOC1 Exocyst complex component 1 yes yes 2 0.0088141 93.839 By MS/MS 4 0 1 1 1805400 1805400 0 1063 2589 1097 2596 2154 2154 1 169900 0 ALQFLEEVK HPRIITEGFEAAKEKALQFLEEVKVSREMD EAAKEKALQFLEEVKVSREMDRETLIDVAR K A L V K V 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1075.5914 P40227 P40227 130 138 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.00018609 156.35 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 38642000 38642000 0 1064 858 1098 2597;2598;2599;2600;2601;2602 2155;2156;2157 2157 3 363030 0 ALQFLEEVKVSR HPRIITEGFEAAKEKALQFLEEVKVSREMD KEKALQFLEEVKVSREMDRETLIDVARTSL K A L S R E 1 1 0 0 0 1 2 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 12 1 1417.7929 P40227 P40227 130 141 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.0058602 91.123 By MS/MS 6 0 1 1 5971600 5971600 0 1065 858 1099 2603 2158 2158 1 41050 0 ALQFPPEGWLR IFICHANVIRYIVCRALQFPPEGWLRLSLN IVCRALQFPPEGWLRLSLNNGSITHLVIRP R A L L R L 1 1 0 0 0 1 1 1 0 0 2 0 0 1 2 0 0 1 0 0 0 0 11 0 1312.6928 Q96HS1 Q96HS1 241 251 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.039116 75.652 By MS/MS 8 0 1 1 107310 107310 0 1066 2168 1100 2604 2159;2160 2159 2 1354.8 0 ALQGASQIIAEIR EDMAQRRKEAADMLKALQGASQIIAEIRET LKALQGASQIIAEIRETHLW__________ K A L I R E 3 1 0 0 0 2 1 1 0 3 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1368.7725 O00429 O00429 719 731 DNM1L Dynamin-1-like protein yes yes 2 0.037982 86.262 By MS/MS 5 0 1 1 553320 553320 0 1067 105 1101 2605 2161 2161 1 5549.5 0 ALQIPEVYLR EHIQRLSKVVTANHRALQIPEVYLREAPWP TANHRALQIPEVYLREAPWPSAQSEIRTIS R A L L R E 1 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 0 10 0 1200.6867 Q14C86 Q14C86 1361 1370 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.039004 74.162 By MS/MS 2 0 1 1 211190 211190 0 1068 1466 1102 2606 2162 2162 1 71432 0 ALQKYEK KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ VTSVEDYKALQKYEKEKFEEMIQQIKETGA K A L E K E 1 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 7 1 878.48617 P48643 P48643 276 282 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.03513 146.94 By MS/MS 7 0.816 1 1 1 3 4635100 4635100 0 1069 940 1103 2607;2608;2609 2163 2163 1 34260 0 ALQLLYDLR KQIKKEGAFPVTQNRALQLLYDLRYLNIVL PVTQNRALQLLYDLRYLNIVLTAKGDEVKS R A L L R Y 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 9 0 1103.6339 Q8WTW3 Q8WTW3 806 814 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.0024404 115.71 By MS/MS 4.5 0.5 1 1 2 491140 491140 0 1070 2010 1104 2610;2611 2164;2165 2164 2 40363 0 ALQLSEPGK FSAYLGSEQYKLLIKALQLSEPGKEIH___ YKLLIKALQLSEPGKEIH____________ K A L G K E 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 9 0 941.5182 Q9H061 Q9H061 184 192 TMEM126A Transmembrane protein 126A yes yes 2 0.012153 96.665 By MS/MS 9 0 1 1 980440 980440 0 1071 2401 1105 2612 2166 2166 1 19295 0 ALQLSEPGKEIH FSAYLGSEQYKLLIKALQLSEPGKEIH___ LIKALQLSEPGKEIH_______________ K A L I H - 1 0 0 0 0 1 2 1 1 1 2 1 0 0 1 1 0 0 0 0 0 0 12 1 1320.7038 Q9H061 Q9H061 184 195 TMEM126A Transmembrane protein 126A yes yes 2;3 0.0014583 152.04 By MS/MS 9 0 2 2 7439200 7439200 0 1072 2401 1106 2613;2614 2167;2168 2167 2 146410 0 ALQNAVTTFVNR FHNGESEESHEQFLKALQNAVTTFVNRMKS FLKALQNAVTTFVNRMKSNHMRGRSITNDS K A L N R M 2 1 2 0 0 1 0 0 0 0 1 0 0 1 0 0 2 0 0 2 0 0 12 0 1332.715 O14964 O14964 411 422 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 2 1.1912E-06 199.68 By MS/MS 4 0 1 1 1236400 1236400 0 1073 149 1107 2615 2169 2169 1 116350 0 ALQQAYDVLIK ICLPAYVRVSHPKVRALQQAYDVLIKMRKT PKVRALQQAYDVLIKMRKTDVDPLDEVCYR R A L I K M 2 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1260.7078 Q5VZ89 Q5VZ89 799 809 DENND4C DENN domain-containing protein 4C yes yes 2 3.3092E-05 157.75 By MS/MS 2 0 1 1 199330 199330 0 1074 1658 1108 2616 2170 2170 1 67420 0 ALQQEQEIEQR LKAEHTNRLKNAFVKALQQEQEIEQRLQQQ AFVKALQQEQEIEQRLQQQAALSPTTAPAV K A L Q R L 1 1 0 0 0 4 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1370.679 Q86YP4;Q8WXI9 Q8WXI9 468 478 GATAD2A;GATAD2B Transcriptional repressor p66-alpha;Transcriptional repressor p66-beta no no 2 1.4542E-06 185.08 By MS/MS By matching 5 0 2 1 1 5414000 5383200 30792 1075 2040;1853 1109 2617;2618 2171 2171 1 53991 25859 ALQQNGAPGIAK NFWYHSYTKGKRLPRALQQNGAPGIAKVKA LPRALQQNGAPGIAKVKAN___________ R A L A K V 3 0 1 0 0 2 0 2 0 1 1 1 0 0 1 0 0 0 0 0 0 0 12 0 1166.6408 Q9BW60 Q9BW60 264 275 ELOVL1 Elongation of very long chain fatty acids protein 1 yes yes 2 0.0021609 125.82 By MS/MS 1 0 1 1 149330 149330 0 1076 2343 1110 2619 2172 2172 1 35984 0 ALQQQQQQQQQK QLREEQRRQQRELMKALQQQQQQQQQKLSG LMKALQQQQQQQQQKLSGWGNVSKPSGTTK K A L Q K L 1 0 0 0 0 9 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 0 1482.7539 Q6Y7W6 Q6Y7W6 974 985 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 2.1359E-19 309.22 By MS/MS 3 0.816 1 1 1 3 1020900 1020900 0 1077 1738 1111 2620;2621;2622 2173;2174 2174 2 99947 0 ALQQYTLEPSEKPFDLK YILNGLTVSIPGLERALQQYTLEPSEKPFD QQYTLEPSEKPFDLKSVPLATAPMAEQRTE R A L L K S 1 0 0 1 0 2 2 0 0 0 3 2 0 1 2 1 1 0 1 0 0 0 17 1 2006.0361 Q9Y678 Q9Y678 561 577 COPG1 Coatomer subunit gamma-1 yes yes 2;3 9.5191E-17 315.41 By MS/MS 4.5 0.5 2 2 4 10028000 10028000 0 1078 2933 1112 2623;2624;2625;2626 2175;2176;2177 2176 3 674940 0 ALQSGQCAGAALDVFTEEPPRDR NCARGGIVDEGALLRALQSGQCAGAALDVF GAALDVFTEEPPRDRALVDHENVISCPHLG R A L D R A 4 2 0 2 1 2 2 2 0 0 2 0 0 1 2 1 1 0 0 1 0 0 23 1 2487.1812 O43175 O43175 248 270 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 1.1102E-07 140.32 By MS/MS 6 0 1 1 28249000 28249000 0 1079 195 1113 2627 2178;2179;2180 2178 3 194190 0 ALQSHSSPEGK LAGATANKASHNRTRALQSHSSPEGKEEPE NRTRALQSHSSPEGKEEPEPLSPELEYIPR R A L G K E 1 0 0 0 0 1 1 1 1 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 1139.5571 Q8N490 Q8N490 40 50 PNKD Probable hydrolase PNKD yes yes 2 0.00052204 131.12 By MS/MS 9 0 1 1 64518 64518 0 1080 1915 1114 2628 2181 2181 1 1269.7 0 ALQSPALGLR IDLALEQGDALALFRALQSPALGLRGLQQQ LALFRALQSPALGLRGLQQQNSDWYLKQLL R A L L R G 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 10 0 1024.6029 P46940 P46940 327 336 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.037951 78.149 By MS/MS 2 0 1 1 384740 384740 0 1081 922 1115 2629 2182 2182 1 130140 0 ALQSVGQIVGEVLK KELTKQYEKSENDLKALQSVGQIVGEVLKQ KALQSVGQIVGEVLKQLTEEKFIVKATNGP K A L L K Q 1 0 0 0 0 2 1 2 0 1 2 1 0 0 0 1 0 0 0 3 0 0 14 0 1439.8348 P62333 P62333 49 62 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.00033751 166.7 By MS/MS 7 0 1 1 158920 158920 0 1082 1159 1116 2630 2183 2183 1 2494.7 0 ALQSYIQGK SWNLARFVFTYKGLRALQSYIQGKTYPAHA TYKGLRALQSYIQGKTYPAHAFLAAFLGGI R A L G K T 1 0 0 0 0 2 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 9 0 1006.5447 Q9Y6I8 Q9Y6I8 90 98 PXMP4 Peroxisomal membrane protein 4 yes yes 2 0.00038098 150.36 By MS/MS 8.5 0.5 1 1 2 3151100 3151100 0 1083 2944 1117 2631;2632 2184 2184 1 46524 0 ALQVMEK YHNMPLIWKPGYLDRALQVMEKVAASPEDI WKPGYLDRALQVMEKVAASPEDIKLCREAL R A L E K V 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 817.43677 Q92552 Q92552 259 265 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.030363 104.45 By MS/MS 7 0 1 1 1485500 1485500 0 1084 2054 1118 2633 2185 2185 1 23319 0 ALREQLNRPR KVRPRLIAELARRVRALREQLNRPRDSQLY ARRVRALREQLNRPRDSQLYAVDYETLTRP R A L P R D 1 3 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 2 1251.716 P82930 P82930 20 29 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 3 0.030008 79.489 By MS/MS 8 0 1 1 3181600 3181600 0 1085 1237 1119 2634 2186 2186 1 40167 0 ALREREEAER AREKEEQLQRQAEERALREREEAERAQRQK QAEERALREREEAERAQRQKEEEARVREEA R A L E R A 2 3 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 2 1257.6426 Q14244 Q14244 554 563 MAP7 Ensconsin yes yes 3 0.0072935 97.597 By MS/MS 4 0 1 1 397650 397650 0 1086 1434 1120 2635 2187 2187 1 37421 0 ALRETLPAEQDLTTK FMECNLNELVKHGLRALRETLPAEQDLTTK ALRETLPAEQDLTTKNVSIGIVGKDLEFTI R A L T K N 2 1 0 1 0 1 2 0 0 0 3 1 0 0 1 0 3 0 0 0 0 0 15 1 1684.8996 P25786 P25786 194 208 PSMA1 Proteasome subunit alpha type-1 yes yes 2;3 2.1727E-06 203.74 By MS/MS 8 0 2 2 6006700 6006700 0 1087 724 1121 2636;2637 2188;2189 2189 2 75834 0 ALRQEFAASR IIVMGVQVVGRAFARALRQEFAASRAAADA RAFARALRQEFAASRAAADARGRAGHRSAA R A L S R A 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 1 1147.6098 Q9Y3D7 Q9Y3D7 23 32 PAM16 Mitochondrial import inner membrane translocase subunit TIM16 yes yes 3 0.020257 81.017 By MS/MS 10 0 1 1 320120 320120 0 1088 2873 1122 2638 2190 2190 1 17253 0 ALSAIADLLTNEHER WTYGRYIRSALRQEKALSAIADLLTNEHER ALSAIADLLTNEHERVVKAASGALRNLAVD K A L E R V 3 1 1 1 0 0 2 0 1 1 3 0 0 0 0 1 1 0 0 0 0 0 15 0 1651.8529 O60716 O60716 711 725 CTNND1 Catenin delta-1 yes yes 2 1.1154E-05 201.09 By MS/MS 5 0.816 1 1 1 3 1038000 1038000 0 1089 272 1123 2639;2640;2641 2191;2192 2191 1 44705 0 ALSDADVQK ______________________________ ______________________________ M A L Q K Q 2 0 0 2 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 945.47673 P36543 P36543 2 10 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 2 0.0048637 110.41 By MS/MS 8 0 1 1 1565600 1565600 0 1090 836 1124 2642 2193 2193 1 19766 0 ALSDLQLIK DGTHSSAYCPDYTVRALSDLQLIKVTRLQY PDYTVRALSDLQLIKVTRLQYLNALLATRA R A L I K V 1 0 0 1 0 1 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 999.59645 Q8NE01 Q8NE01 632 640 CNNM3 Metal transporter CNNM3 yes yes 2 0.020263 88.819 By MS/MS 5 0 1 1 536300 536300 0 1091 1958 1125 2643 2194 2194 1 5378.9 0 ALSEPLSAAQLR MAAGAGAGSAPRWLRALSEPLSAAQLRRLE WLRALSEPLSAAQLRRLEEHRYSAAGVSLL R A L L R R 3 1 0 0 0 1 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 12 0 1254.6932 Q8WUD6 Q8WUD6 16 27 CHPT1 Cholinephosphotransferase 1 yes yes 2 0.0045303 87.184 By MS/MS 1.5 0.5 1 1 2 277170 277170 0 1092 2015 1126 2644;2645 2195 2195 1 76647 0 ALSETQSVVDEQR A L Q R 1 1 0 1 0 2 2 0 0 0 1 0 0 0 0 2 1 0 0 2 0 0 13 0 1460.7107 REV__Q96T58 yes yes 2 0.0083808 97.565 By MS/MS By MS/MS 9 0.816 2 2 2 2 4 2974200 1587800 1386400 + 1093 2982 1127 2646;2647;2648;2649;2650;2651 2196;2197;2198 2198 3 59834 2085000 ALSINTLVK CLLDKGMMSTVTEVRALSINTLVKISKSAG TVTEVRALSINTLVKISKSAGAMLKPHAPK R A L V K I 1 0 1 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 9 0 957.58588 Q5VYK3 Q5VYK3 1272 1280 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.037112 75.043 By MS/MS 2.5 0.5 1 1 2 1667400 1667400 0 1094 1656 1128 2652;2653 2199 2199 1 443200 0 ALSPFAESSQLK RGHGIPFQDGHSCLRALSPFAESSQLKGQT CLRALSPFAESSQLKGQTGVTTSFSLFIDK R A L L K G 2 0 0 0 0 1 1 0 0 0 2 1 0 1 1 3 0 0 0 0 0 0 12 0 1276.6663 Q96RR1 Q96RR1 80 91 PEO1 Twinkle protein, mitochondrial yes yes 2 0.017846 89.171 By MS/MS 5 0 1 1 54684 0 54684 1095 2225 1129 2654 2200 2200 1 0 45923 ALSQGLLTFR ______________________________ ______________________________ M A L F R D 1 1 0 0 0 1 0 1 0 0 3 0 0 1 0 1 1 0 0 0 0 0 10 0 1104.6291 A2RRD8;Q96IR2 A2RRD8 2 11 ZNF320;ZNF845 Zinc finger protein 320;Zinc finger protein 845 yes no 2 0.0086262 99.568 By MS/MS 4 0 1 1 38471 38471 0 1096 10 1130 2655 2201 2201 1 3620.4 0 ALSQGVESVK VSKGGEKLGRTAAFRALSQGVESVKKEIDD TAAFRALSQGVESVKKEIDDSVLGQTGPYR R A L V K K 1 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 10 0 1016.5502 O43615 O43615 178 187 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.032389 77.533 By MS/MS 7 0 1 1 864810 864810 0 1097 221 1131 2656 2202 2202 1 13576 0 ALSQGVESVKK VSKGGEKLGRTAAFRALSQGVESVKKEIDD AAFRALSQGVESVKKEIDDSVLGQTGPYRR R A L K K E 1 0 0 0 0 1 1 1 0 0 1 2 0 0 0 2 0 0 0 2 0 0 11 1 1144.6452 O43615 O43615 178 188 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 3.9836E-05 169.76 By MS/MS 7.5 0.5 2 2 4 14430000 14430000 0 1098 221 1132 2657;2658;2659;2660 2203;2204;2205;2206 2203 4 222590 0 ALSQLAEVEEK AAMLGNSEDHTALSRALSQLAEVEEKIDQL ALSRALSQLAEVEEKIDQLHQEQAFADFYM R A L E K I 2 0 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1215.6347 O60749;Q13596 O60749 363 373 SNX2;SNX1 Sorting nexin-2;Sorting nexin-1 no no 2 1.1303E-06 189.17 By MS/MS 5 0 1 1 2291700 2291700 0 1099 274;1401 1133 2661 2207 2207 1 22984 0 ALSSQHQAR RAVQKLRREVEKAKRALSSQHQARIEIESF VEKAKRALSSQHQARIEIESFYEGEDFSET R A L A R I 2 1 0 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 996.51009 P11021 P11021 298 306 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.00012984 158.07 By MS/MS By MS/MS 5.5 0.707 5 2 1 6 2 19007000 18837000 170770 1100 571 1134 2662;2663;2664;2665;2666;2667;2668;2669 2208;2209;2210;2211;2212 2209 5 188680 143410 ALSTDPAAPNLK KGISMSSSKLLLAAKALSTDPAAPNLKSQL AAKALSTDPAAPNLKSQLAAAARAVTDSIN K A L L K S 3 0 1 1 0 0 0 0 0 0 2 1 0 0 2 1 1 0 0 0 0 0 12 0 1196.6401 Q9Y490 Q9Y490 1321 1332 TLN1 Talin-1 yes yes 2 0.00080158 128.86 By MS/MS 2 0.816 1 1 1 3 2609500 2609500 0 1101 2888 1135 2670;2671;2672 2213;2214 2214 2 517360 0 ALSTFFVENSLR ETRLDNDKEMLEALKALSTFFVENSLRTRR ALKALSTFFVENSLRTRRNLRGDIERKSLA K A L L R T 1 1 1 0 0 0 1 0 0 0 2 0 0 2 0 2 1 0 0 1 0 0 12 0 1382.7194 Q9Y2V7 Q9Y2V7 59 70 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 1.5724E-12 233.84 By MS/MS 5 0 1 1 506030 506030 0 1102 2845 1136 2673 2215 2215 1 5075.3 0 ALSTGEKGFGYK ELFADKVPKTAENFRALSTGEKGFGYKGSC NFRALSTGEKGFGYKGSCFHRIIPGFMCQG R A L Y K G 1 0 0 0 0 0 1 3 0 0 1 2 0 1 0 1 1 0 1 0 0 0 12 1 1256.6401 P62937 P62937 38 49 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.0040384 115.91 By MS/MS 10 0 1 1 656300 656300 0 1103 1188 1137 2674 2216 2216 1 35372 0 ALSVGLVK SAKITVNEVELLVMKALSVGLVKGSIDEVD VELLVMKALSVGLVKGSIDEVDKRVHMTWV K A L V K G 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 8 0 785.50109 Q9UNM6 Q9UNM6 314 321 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.017181 102.77 By MS/MS 7 0 1 1 3509800 3509800 0 1104 2791 1138 2675 2217 2217 1 55098 0 ALTALFK GVMVPAPIQDLEALRALTALFKEQRNRETA IQDLEALRALTALFKEQRNRETAPRTIFQR R A L F K E 2 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 7 0 762.46398 Q9UBB4 Q9UBB4 28 34 ATXN10 Ataxin-10 yes yes 2 0.01405 124.89 By MS/MS 6.5 0.5 1 1 2 1628400 1628400 0 1105 2693 1139 2676;2677 2218 2218 1 22147 0 ALTALGLAVPR DSLRELLRLPLRYPRALTALGLAVPRGVLL RYPRALTALGLAVPRGVLLAGPPGVGKTQL R A L P R G 3 1 0 0 0 0 0 1 0 0 3 0 0 0 1 0 1 0 0 1 0 0 11 0 1080.6655 Q9BVQ7 Q9BVQ7 225 235 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.0013977 113.66 By MS/MS 5 0 1 1 502510 502510 0 1106 2338 1140 2678 2219 2219 1 5039.9 0 ALTDAGCNLNPLQYIK TQQAPSEADLEQYKKALTDAGCNLNPLQYI LTDAGCNLNPLQYIKQWKAFTKMASAPASY K A L I K Q 2 0 2 1 1 1 0 1 0 1 3 1 0 0 1 0 1 0 1 0 0 0 16 0 1789.9033 Q8WVM8 Q8WVM8 479 494 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.00012062 182.71 By MS/MS 5 0 1 1 140170 140170 0 1107 2028 1141 2679 2220 2220 1 1405.8 0 ALTGDAAIQPR SVVGYTNCGKTTLIKALTGDAAIQPRDQLF TLIKALTGDAAIQPRDQLFATLDVTAHAGT K A L P R D 3 1 0 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 11 0 1111.5986 O43824 O43824 313 323 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.00068682 140.83 By MS/MS By MS/MS 6 0 2 1 1 4375300 4307300 67952 1108 240 1142 2680;2681 2221;2222 2222 2 29610 69632 ALTHIDHSLSR VQGKKGEDVLGSVRRALTHIDHSLSRQNCP SVRRALTHIDHSLSRQNCPFLAGETESLAD R A L S R Q 1 1 0 1 0 0 0 0 2 1 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1248.6575 P56192 P56192 120 130 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2;3 0.018957 90.827 By MS/MS 4 0 2 2 5029100 5029100 0 1109 1067 1143 2682;2683 2223;2224 2224 2 473270 0 ALTLGALTLPLAR PQSQELDVQVKDDSRALTLGALTLPLARLL SRALTLGALTLPLARLLTAPELILDQWFQL R A L A R L 3 1 0 0 0 0 0 1 0 0 5 0 0 0 1 0 2 0 0 0 0 0 13 0 1308.8129 Q9BSJ8 Q9BSJ8 551 563 ESYT1 Extended synaptotagmin-1 yes yes 2 0.0051756 103.08 By MS/MS 5 0 1 1 41090 41090 0 1110 2308 1144 2684 2225;2226 2226 2 412.11 0 ALTLIAGSPLK LERLKNEITRLTTVKALTLIAGSPLKIDLR TTVKALTLIAGSPLKIDLRPVLGEGVPILA K A L L K I 2 0 0 0 0 0 0 1 0 1 3 1 0 0 1 1 1 0 0 0 0 0 11 0 1082.6699 Q86VP6 Q86VP6 631 641 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00043379 132.88 By MS/MS 3.5 1.12 1 1 1 1 4 1518000 1518000 0 1111 1831 1145 2685;2686;2687;2688 2227 2227 1 106010 0 ALTLPGSSENEYIMK EIAPFVEILLTNLFKALTLPGSSENEYIMK ALTLPGSSENEYIMKAIMRSFSLLQEAIIP K A L M K A 1 0 1 0 0 0 2 1 0 1 2 1 1 0 1 2 1 0 1 0 0 0 15 0 1651.8127 P55060 P55060 560 574 CSE1L Exportin-2 yes yes 2 4.4007E-07 210.15 By MS/MS 4 0 2 2 2941600 2941600 0 1112 1053 1146;1147 2689;2690 2228;2229 2228 584 2 276820 0 ALTNLPHTDFTLCK PAFFQTTVTAQILLKALTNLPHTDFTLCKC KALTNLPHTDFTLCKCMIDQAHQEERPIRQ K A L C K C 1 0 1 1 1 0 0 0 1 0 3 1 0 1 1 0 3 0 0 0 0 0 14 0 1629.8185 Q9UBQ5 Q9UBQ5 73 86 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2;3 1.2798E-17 269.44 By MS/MS 8.5 0.5 2 2 4 14704000 14704000 0 1113 2703 1148 2691;2692;2693;2694 2230;2231 2231 2 251940 0 ALTQFPLPK RGSSFEMTDDDSAIRALTQFPLPKNLLAKV DDSAIRALTQFPLPKNLLAKVIQIATSSST R A L P K N 1 0 0 0 0 1 0 0 0 0 2 1 0 1 2 0 1 0 0 0 0 0 9 0 1013.591 Q7L2E3 Q7L2E3 238 246 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.020263 88.819 By MS/MS 3.5 0.5 1 1 2 1018400 1018400 0 1114 1761 1149 2695;2696 2232 2232 1 47336 0 ALTQTGGPHVK GVFREATTEFSVDARALTQTGGPHVKARVA VDARALTQTGGPHVKARVANPSGNLTETYV R A L V K A 1 0 0 0 0 1 0 2 1 0 1 1 0 0 1 0 2 0 0 1 0 0 11 0 1107.6037 P21333 P21333 1284 1294 FLNA Filamin-A yes yes 2 1.38E-05 169.65 By MS/MS 2 0.816 1 1 1 3 1515300 1515300 0 1115 677 1150 2697;2698;2699 2233;2234 2233 2 403180 0 ALTSADGASEEQSQNDEDNQGSEK KLCREALDVLGAVLKALTSADGASEEQSQN EEQSQNDEDNQGSEKLVEQLDIEETEQSKL K A L E K L 3 0 2 3 0 3 4 2 0 0 1 1 0 0 0 4 1 0 0 0 0 0 24 0 2509.0324 Q92552 Q92552 289 312 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 3 4.5356E-16 237.18 By MS/MS 7 0 1 1 2766000 2766000 0 1116 2054 1151 2700 2235 2235 1 43421 0 ALTSEIALLQSR STLNSGKKSLETEHKALTSEIALLQSRLKT EHKALTSEIALLQSRLKTEGSDLCDRVSEM K A L S R L 2 1 0 0 0 1 1 0 0 1 3 0 0 0 0 2 1 0 0 0 0 0 12 0 1300.7351 P04843 P04843 525 536 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 6.1184E-44 320.02 By MS/MS By matching 5.73 2.6 1 1 4 1 1 1 1 1 10 1 25426000 25376000 50094 1117 478 1152 2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711 2236;2237;2238;2239;2240;2241;2242;2243;2244 2238 9 380510 42068 ALTVPELTQQMFDAK PGFAPLTSRGSQQYRALTVPELTQQMFDAK ALTVPELTQQMFDAKNMMAACDPRHGRYLT R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 1 1 1 0 2 0 0 1 0 0 15 0 1690.86 P04350;P68371;Q13509 P68371 283 297 TUBB4A;TUBB4B;TUBB3 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-3 chain no no 2;3 9.7258E-17 262.11 By MS/MS By matching 6.55 0.782 7 2 2 10 1 53499000 53421000 78773 1118 1212;472;1393 1153;1154 2712;2713;2714;2715;2716;2717;2718;2719;2720;2721;2722 2245;2246;2247;2248;2249;2250;2251;2252;2253;2254;2255;2256;2257;2258;2259;2260 2251 174 16 391010 80720 ALTVPELTQQMFDAR PGFAPLTSRGSQQYRALTVPELTQQMFDAR ALTVPELTQQMFDARNMMAACDPRHGRYLT R A L A R N 2 1 0 1 0 2 1 0 0 0 2 0 1 1 1 0 2 0 0 1 0 0 15 0 1718.8662 Q9BUF5 Q9BUF5 283 297 TUBB6 Tubulin beta-6 chain yes yes 2 3.4934E-05 195.72 By MS/MS 6.75 0.829 2 1 1 4 4013000 4013000 0 1119 2324 1155;1156 2723;2724;2725;2726 2261;2262;2263 2261 1074 3 29667 0 ALTVPELTQQMFDSK PGFAPLTSRGSQQYRALTVPELTQQMFDSK ALTVPELTQQMFDSKNMMAACDPRHGRYLT R A L S K N 1 0 0 1 0 2 1 0 0 0 2 1 1 1 1 1 2 0 0 1 0 0 15 0 1706.8549 Q13885;Q9BVA1 Q13885 283 297 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 0.00040587 165.58 By MS/MS 6.8 0.748 2 2 1 5 11059000 11059000 0 1120 1412;2331 1157;1158 2727;2728;2729;2730;2731 2264;2265 2264 806 2 80741 0 ALTVPELTQQVFDAK PGFAPLTSRGSQQYRALTVPELTQQVFDAK ALTVPELTQQVFDAKNMMAACDPRHGRYLT R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 0 1 1 0 2 0 0 2 0 0 15 0 1658.8879 P07437 P07437 283 297 TUBB Tubulin beta chain yes yes 2;3 1.542E-17 269.44 By MS/MS By MS/MS 6.5 1.38 1 1 11 1 2 1 1 17 1 629690000 629370000 310120 1121 509 1159 2732;2733;2734;2735;2736;2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747;2748;2749 2266;2267;2268;2269;2270;2271;2272;2273;2274;2275;2276;2277;2278;2279;2280;2281;2282;2283;2284;2285;2286;2287;2288;2289;2290;2291;2292;2293;2294;2295;2296;2297;2298;2299;2300;2301;2302;2303;2304;2305;2306;2307;2308;2309 2300 44 4421000 317790 ALVAVLLSR HPHRLTGNKVQQYHRALVAVLLSRTWHVRR VQQYHRALVAVLLSRTWHVRRQAQQTVRKL R A L S R T 2 1 0 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 9 0 940.60695 Q92616 Q92616 568 576 GCN1L1 Translational activator GCN1 yes yes 2 0.00077061 148.38 By MS/MS 2.5 0.5 1 1 2 851320 851320 0 1122 2064 1160 2750;2751 2310;2311 2310 2 265430 0 ALVAYYQK GHVAQIYAIRQSISKALVAYYQKYVDEASK IRQSISKALVAYYQKYVDEASKKEIKDILI K A L Q K Y 2 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 8 0 954.51747 P62249 P62249 91 98 RPS16 40S ribosomal protein S16 yes yes 2 0.0018882 144.29 By MS/MS 9 0.816 1 1 1 3 73221000 73221000 0 1123 1145 1161 2752;2753;2754 2312;2313 2313 2 3724200 0 ALVDHENVISCPHLGASTK GAALDVFTEEPPRDRALVDHENVISCPHLG HENVISCPHLGASTKEAQSRCGEEIAVQFV R A L T K E 2 0 1 1 1 0 1 1 2 1 2 1 0 0 1 2 1 0 0 2 0 0 19 0 2047.0157 O43175 O43175 271 289 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3;4 0.00015106 158.92 By MS/MS 6.86 0.833 3 2 2 7 42595000 42595000 0 1124 195 1162 2755;2756;2757;2758;2759;2760;2761 2314;2315;2316 2314 3 327780 0 ALVEFTNSPDCLSK LYETTDTTTRLQAEKALVEFTNSPDCLSKC KALVEFTNSPDCLSKCQLLLERGSSSYSQL K A L S K C 1 0 1 1 1 0 1 0 0 0 2 1 0 1 1 2 1 0 0 1 0 0 14 0 1579.7552 Q9UIA9 Q9UIA9 33 46 XPO7 Exportin-7 yes yes 2 2.1395E-11 241.31 By MS/MS 4 0 1 1 1785900 1785900 0 1125 2740 1163 2762 2317 2317 1 168070 0 ALVELLR AYLRRIKMELQQKDRALVELLREKVGLFAE MELQQKDRALVELLREKVGLFAEMTHFQAE R A L L R E 1 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 812.51199 Q92974 Q92974 603 609 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.040168 97.068 By MS/MS 4 0.816 1 1 1 3 783100 783100 0 1126 2083 1164 2763;2764;2765 2318 2318 1 57310 0 ALVFDSTFDQYR ERIPPPKVHRKNPLRALVFDSTFDQYRGVI PLRALVFDSTFDQYRGVIANVALFDGVVSK R A L Y R G 1 1 0 2 0 1 0 0 0 0 1 0 0 2 0 1 1 0 1 1 0 0 12 0 1460.6936 Q8N442 Q8N442 256 267 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.0015085 115.7 By MS/MS 5 0 1 1 807710 807710 0 1127 1914 1165 2766 2319 2319 1 8100.9 0 ALVFQPVAELK ANTPDSGCVLGMRKRALVFQPVAELKDQTD MRKRALVFQPVAELKDQTDFEHRIPKEQWW R A L L K D 2 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 2 0 0 11 0 1213.7071 P08237 P08237 717 727 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.0011186 119.22 By MS/MS 4.5 0.5 1 1 2 623640 623640 0 1128 520 1166 2767;2768 2320 2320 1 14464 0 ALVGDFMNR YLNYKVCLAEVYQDKALVGDFMNRRGDYDD EVYQDKALVGDFMNRRGDYDDPKVCANEFK K A L N R R 1 1 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 9 0 1021.5015 Q12789 Q12789 1345 1353 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0017819 124.08 By MS/MS 2.33 0.471 2 1 3 791480 791480 0 1129 1328 1167;1168 2769;2770;2771 2321;2322 2322 784 2 238300 0 ALVGLVNDESPEIQAQCNK KCSQSLVECAGPLLKALVGLVNDESPEIQA LVNDESPEIQAQCNKVLRHFADQKVVVGNK K A L N K V 2 0 2 1 1 2 2 1 0 1 2 1 0 0 1 1 0 0 0 2 0 0 19 0 2084.0208 O43156 O43156 335 353 TTI1 TELO2-interacting protein 1 homolog yes yes 2 3.8914E-72 374.2 By MS/MS 4 0 1 1 2229300 2229300 0 1130 192 1169 2772 2323 2323 1 209800 0 ALVLAQIR VLQMPRGNLEVVHHRALVLAQIRKWLDKLM LEVVHHRALVLAQIRKWLDKLMFKEAFECM R A L I R K 2 1 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 8 0 882.56509 O95163 O95163 723 730 IKBKAP Elongator complex protein 1 yes yes 2 0.031113 89.673 By MS/MS 3 0 1 1 121530 121530 0 1131 388 1170 2773 2324 2324 1 2223.7 0 ALVPFEDLFGQAPGGER SLVPSPPEPRQRPTKALVPFEDLFGQAPGG VPFEDLFGQAPGGERDKASFLQTVQKFAEH K A L E R D 2 1 0 1 0 1 2 3 0 0 2 0 0 2 2 0 0 0 0 1 0 0 17 0 1801.8999 Q9BQ95 Q9BQ95 68 84 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 2 0.0004183 166.86 By MS/MS 6 0 1 1 385400 385400 0 1132 2285 1171 2774 2325;2326 2325 2 2649.3 0 ALVQNDTLLQVK FDQQNGRTYLKYSIKALVQNDTLLQVKGTG SIKALVQNDTLLQVKGTGANGSFKLNRKKL K A L V K G 1 0 1 1 0 2 0 0 0 0 3 1 0 0 0 0 1 0 0 2 0 0 12 0 1340.7664 Q92522 Q92522 95 106 H1FX Histone H1x yes yes 2 0.044134 68.786 By MS/MS 8 0 1 1 1234500 1234500 0 1133 2049 1172 2775 2327 2327 0 15585 0 ALVSGKPAESSAVAATEK RRESVPPSIIMSSQKALVSGKPAESSAVAA SGKPAESSAVAATEKKAVTPAPPIKRWELS K A L E K K 5 0 0 0 0 0 2 1 0 0 1 2 0 0 1 3 1 0 0 2 0 0 18 1 1714.9101 O95182 O95182 75 92 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 2;3 0.0024099 101.72 By MS/MS 10 0 2 2 566340 566340 0 1134 392 1173 2776;2777 2328;2329;2330 2329 3 30524 0 ALVSGKPAESSAVAATEKK RRESVPPSIIMSSQKALVSGKPAESSAVAA GKPAESSAVAATEKKAVTPAPPIKRWELSS K A L K K A 5 0 0 0 0 0 2 1 0 0 1 3 0 0 1 3 1 0 0 2 0 0 19 2 1843.0051 O95182 O95182 75 93 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 3 0.017229 73.76 By MS/MS 10 0 1 1 176010 176010 0 1135 392 1174 2778 2331 2331 1 9486.4 0 ALWEALLNTK VAPGCLSQSSDTTAKALWEALLNTKHKEAV DTTAKALWEALLNTKHKEAVMEVRRHLVEA K A L T K H 2 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 1 1 0 0 0 0 10 0 1157.6445 Q8WU76 Q8WU76 342 351 SCFD2 Sec1 family domain-containing protein 2 yes yes 2 0.0014708 114.51 By MS/MS 5 0 1 1 159960 159960 0 1136 2011 1175 2779 2332 2332 1 1604.3 0 ALYEQNQSDVNEAK AFNEDGLRQVLEEMKALYEQNQSDVNEAKS KALYEQNQSDVNEAKSGGRSDLIPTIKFRH K A L A K S 2 0 2 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 14 0 1607.7427 Q14691 Q14691 38 51 GINS1 DNA replication complex GINS protein PSF1 yes yes 2 8.4445E-33 308.6 By MS/MS 9 0 1 1 354290 354290 0 1137 1452 1176 2780 2333 2333 1 6972.4 0 ALYTLSGETEELSR NHFLILFRDSSCQFRALYTLSGETEELSRL RALYTLSGETEELSRLAGYGPRTVTPAMVE R A L S R L 1 1 0 0 0 0 3 1 0 0 3 0 0 0 0 2 2 0 1 0 0 0 14 0 1567.773 Q9P1Y5 Q9P1Y5 1171 1184 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 2.3642E-08 224.66 By MS/MS 3 0 1 1 184790 184790 0 1138 2673 1177 2781 2334 2334 1 3381.2 0 ALYTLVNK HTWIRQCLKYDAQDKALYTLVNKVQYGIFP KYDAQDKALYTLVNKVQYGIFPDNFTFNLL K A L N K V 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 0 1 0 1 1 0 0 8 0 920.53312 Q92552 Q92552 125 132 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.021068 98.458 By MS/MS 7.5 0.5 1 1 2 7462500 7462500 0 1139 2054 1178 2782;2783 2335 2335 1 113760 0 AMADALLER PMFREYSLQVLKNARAMADALLERGYSLVS VLKNARAMADALLERGYSLVSGGTDNHLVL R A M E R G 3 1 0 1 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 9 0 988.50117 P34897 P34897 360 368 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.0022602 125.82 By MS/MS 6 0 1 1 0 0 0 1140 809 1179 2784 2336 2336 1 0 0 AMAVLESLR LEACVRDVLNDTAPRAMAVLESLRVIITNF NDTAPRAMAVLESLRVIITNFPAAKSLDIQ R A M L R V 2 1 0 0 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 9 0 988.53755 P47897 P47897 568 576 QARS Glutamine--tRNA ligase yes yes 2 0.0023364 117.04 By MS/MS 4.5 0.5 1 1 2 1172600 1172600 0 1141 928 1180 2785;2786 2337 2337 1 90004 0 AMDLAQAGSTVESK FTTYFLPLANTLKSKAMDLAQAGSTVESKI KAMDLAQAGSTVESKIYDTLQWQMWTLLPG K A M S K I 3 0 0 1 0 1 1 1 0 0 1 1 1 0 0 2 1 0 0 1 0 0 14 0 1406.6711 Q5JTH9 Q5JTH9 600 613 RRP12 RRP12-like protein yes yes 2 0.0013144 145.31 By MS/MS 3 0 1 1 329430 329430 0 1142 1610 1181 2787 2338 2338 1 6027.6 0 AMEDPGVRDTMLQALR IKVDPLFTELLNGIRAMEDPGVRDTMLQAL MEDPGVRDTMLQALRFVIQGAGAKVDAVIR R A M L R F 2 2 0 2 0 1 1 1 0 0 2 0 2 0 1 0 1 0 0 1 0 0 16 1 1801.8815 Q92616 Q92616 2394 2409 GCN1L1 Translational activator GCN1 yes yes 3 0.01771 81.311 By MS/MS 2 0 1 1 321130 321130 0 1143 2064 1182 2788 2339 2339 993 1 108620 0 AMEGIFIKPSVEPSAGHDEL EVHGMPSANTHNTWKAMEGIFIKPSVEPSA FIKPSVEPSAGHDEL_______________ K A M E L - 2 0 0 1 0 0 3 2 1 2 1 1 1 1 2 2 0 0 0 1 0 0 20 1 2126.0354 Q9HCN8 Q9HCN8 202 221 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 3 1.292E-05 144.3 By MS/MS 9 0 2 2 1258700 1258700 0 1144 2516 1183;1184 2789;2790 2340;2341 2340 1106 2 24772 0 AMEVDERPTEQYSDIGGLDK LILETLPTEYDSRVKAMEVDERPTEQYSDI ERPTEQYSDIGGLDKQIQELVEAIVLPMNH K A M D K Q 1 1 0 3 0 1 3 2 0 1 1 1 1 0 1 1 1 0 1 1 0 0 20 1 2252.0267 P17980 P17980 174 193 PSMC3 26S protease regulatory subunit 6A yes yes 2 9.5015E-05 146.67 By MS/MS 6 0 1 1 2039400 2039400 0 1145 647 1185 2791 2342 2342 1 14020 0 AMFEQMR ______________________________ ______________________________ M A M M R A 1 1 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 7 0 911.39934 Q9UBQ5 Q9UBQ5 2 8 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.0072838 117.16 By MS/MS By matching 8.8 0.4 1 4 4 1 6336000 6304000 32003 1146 2703 1186;1187;1188 2792;2793;2794;2795;2796 2343;2344;2345;2346 2346 1146;1147 4 122990 72978 AMGAAQVVVTDLSATR CGAGPIGMVTLLVAKAMGAAQVVVTDLSAT MGAAQVVVTDLSATRLSKAKEIGADLVLQI K A M T R L 4 1 0 1 0 1 0 1 0 0 1 0 1 0 0 1 2 0 0 3 0 0 16 0 1588.8243 Q00796 Q00796 194 209 SORD Sorbitol dehydrogenase yes yes 2 0.00026895 135.91 By MS/MS 7 0 1 1 273730 273730 0 1147 1263 1189 2797 2347 2347 1 4297.1 0 AMGIMNSFVNDIFER KVLKQVHPDTGISSKAMGIMNSFVNDIFER AMGIMNSFVNDIFERIASEASRLAHYNKRS K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q8N257 Q99880 59 73 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B yes no 2 2.797E-07 205.8 By MS/MS 10 0 1 1 222760 222760 0 1148 279 1190 2798 2348 2348 124;125 1 12006 0 AMGPLVLTEVLFNEK SDKEIVAEAERLDVKAMGPLVLTEVLFNEK AMGPLVLTEVLFNEKIREQIKKYRRHFLRF K A M E K I 1 0 1 0 0 0 2 1 0 0 3 1 1 1 1 0 1 0 0 2 0 0 15 0 1659.8906 P55010 P55010 274 288 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.00043852 165.58 By MS/MS 6 0 1 1 318640 318640 0 1149 1050 1191 2799 2349 2349 583 1 2190.4 0 AMGTLLNTAISEVIGK GIVWQDVLPVNIYCKAMGTLLNTAISEVIG MGTLLNTAISEVIGKITALEDISTEDGDRL K A M G K I 2 0 1 0 0 0 1 2 0 2 2 1 1 0 0 1 2 0 0 1 0 0 16 0 1616.8807 O43264 O43264 652 667 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.0274E-11 240.65 By MS/MS 4 0 1 1 73712 73712 0 1150 200 1192 2800 2350;2351;2352 2352 99 3 6936.8 0 AMGVVVATGVNTEIGK KKNMLFSGTNIAAGKAMGVVVATGVNTEIG MGVVVATGVNTEIGKIRDEMVATEQERTPL K A M G K I 2 0 1 0 0 0 1 3 0 1 0 1 1 0 0 0 2 0 0 4 0 0 16 0 1544.8232 P16615 P16615 219 234 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.9734E-12 246.56 By MS/MS 1.5 0.5 1 1 2 635920 635920 0 1151 635 1193 2801;2802 2353 2353 308 1 179600 0 AMIEVEDFVDPNGK MEAMLQLFRAQLLPKAMIEVEDFVDPNGKI KAMIEVEDFVDPNGKISLQREETPSNRGES K A M G K I 1 0 1 2 0 0 2 1 0 1 0 1 1 1 1 0 0 0 0 2 0 0 14 0 1562.7287 Q92538 Q92538 1046 1059 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00042831 145.23 By MS/MS 2 0 2 2 248580 248580 0 1152 2050 1194;1195 2803;2804 2354;2355 2354 987 1 84081 0 AMNQQTTLDTPQLER KHVAYVFQALIYWIKAMNQQTTLDTPQLER AMNQQTTLDTPQLERKRTRELLELGIDNED K A M E R K 1 1 1 1 0 3 1 0 0 0 2 0 1 0 1 0 3 0 0 0 0 0 15 0 1744.8414 O95071 O95071 1960 1974 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 6.0774E-11 278.35 By MS/MS 2.5 0.5 1 1 2 690470 690470 0 1153 384 1196 2805;2806 2356 2356 1 196350 0 AMNVLTEAEER LQEMKEKLGRNVNMRAMNVLTEAEERYNDL VNMRAMNVLTEAEERYNDLMKKKRIVENDK R A M E R Y 2 1 1 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 11 0 1261.5973 O95347 O95347 987 997 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 1.6547E-05 167.09 By MS/MS 3 0 1 1 469590 469590 0 1154 405 1197 2807 2357 2357 1 8592.1 0 AMQADISQAAQILSSDPSR ASALQIATHTAFVAKAMQADISQAAQILSS DISQAAQILSSDPSRTHQALGILSKTYDAA K A M S R T 4 1 0 2 0 3 0 0 0 2 1 0 1 0 1 4 0 0 0 0 0 0 19 0 1987.9633 P42166 P42166 592 610 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 2.4493E-08 223.68 By MS/MS 5 0 1 1 701900 701900 0 1155 875 1198 2808 2358 2358 461 1 7039.7 0 AMQDAEVSK IVTDLIRRTIAPCQKAMQDAEVSKSDIGEV IAPCQKAMQDAEVSKSDIGEVILVGGMTRM K A M S K S 2 0 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 9 0 977.4488 P38646 P38646 369 377 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.047122 77.192 By MS/MS 5 0 1 1 827130 827130 0 1156 850 1199 2809 2359 2359 1 8295.7 0 AMQDAEVSKSDIGEVILVGGMTR IVTDLIRRTIAPCQKAMQDAEVSKSDIGEV KSDIGEVILVGGMTRMPKVQQTVQDLFGRA K A M T R M 2 1 0 2 0 1 2 3 0 2 1 1 2 0 0 2 1 0 0 3 0 0 23 1 2405.193 P38646 P38646 369 391 HSPA9 Stress-70 protein, mitochondrial yes yes 3 1.5462E-07 128.29 By MS/MS 5 0 1 1 2231700 2231700 0 1157 850 1200 2810 2360 2360 432;433 1 22383 0 AMTGVEQWPYR ASEMAVAHALTEKSKAMTGVEQWPYRAVAQ EKSKAMTGVEQWPYRAVAQALEVIPRTLIQ K A M Y R A 1 1 0 0 0 1 1 1 0 0 0 0 1 0 1 0 1 1 1 1 0 0 11 0 1336.6234 P49368 P49368 428 438 CCT3 T-complex protein 1 subunit gamma yes yes 2 6.4368E-06 176.33 By MS/MS 6.4 1.85 2 2 1 5 14524000 14524000 0 1158 947 1201;1202 2811;2812;2813;2814;2815 2361;2362;2363;2364 2361 514 3 141020 0 AMTIDQLSLEEK A M E K 1 0 0 1 0 1 2 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 12 0 1376.6857 REV__Q92558 yes yes 2 0.029842 79.489 By MS/MS 3 0 1 1 3250400 3250400 0 + 1159 2977 1203 2816 2365 2365 1227 1 59474 0 AMWTGGLSMWLR A M L R 1 1 0 0 0 0 0 2 0 0 2 0 2 0 0 1 1 2 0 0 0 0 12 0 1407.6791 REV__Q12929 yes yes 3 0.054827 94.616 By MS/MS 7 0 1 1 1285600 1285600 0 + 1160 2965 1204 2817 2366 2366 1223;1224 1 20182 0 AMYLPDTLSPADQLK HLHQEIPTSLLILSRAMYLPDTLSPADQLK AMYLPDTLSPADQLKSTLQTLPEIVAKEAQ R A M L K S 2 0 0 2 0 1 0 0 0 0 3 1 1 0 2 1 1 0 1 0 0 0 15 0 1661.8335 O95202 O95202 420 434 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.00044143 145.14 By MS/MS 5 0 1 1 1311400 1311400 0 1161 394 1205 2818 2367 2367 155 1 13153 0 ANACNSVIK NVFDTELKGLSKIERANACNSVIKQLMKKE LSKIERANACNSVIKQLMKKEFTLEFSRDR R A N I K Q 2 0 2 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 0 975.48076 P16615 P16615 468 476 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.00094065 134.77 By MS/MS 3 1.41 1 1 1 1 1 5 10364000 10364000 0 1162 635 1206 2819;2820;2821;2822;2823 2368;2369;2370;2371;2372 2368 5 1572000 0 ANAHFILK GPSTEPSVVESKDRKANAHFILKLLCDSVV VESKDRKANAHFILKLLCDSVVLQPYLREL K A N L K L 2 0 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 912.51814 O95071 O95071 1083 1090 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.02311 96.19 By MS/MS 2.5 0.5 1 1 2 717820 717820 0 1163 384 1207 2824;2825 2373 2373 1 153730 0 ANAPCVIFIDELDSVGGK GVGASRIRNLFREAKANAPCVIFIDELDSV PCVIFIDELDSVGGKRIESPMHPYSRQTIN K A N G K R 2 0 1 2 1 0 1 2 0 2 1 1 0 1 1 1 0 0 0 2 0 0 18 0 1903.935 Q96TA2 Q96TA2 429 446 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 0.00015744 133.52 By MS/MS 6 0 2 2 1395500 1395500 0 1164 2241 1208 2826;2827 2374;2375 2375 2 9592.7 0 ANAVAQQKK A N K K 3 0 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 1 956.54033 REV__Q9NUL3 yes yes 2 0.002772 137.18 By MS/MS 10 0 1 1 5776600 5776600 0 + 1165 2988 1209 2828 2376 2376 1 311340 0 ANDDIIVNWVNR RYTLNVLEDLGDGQKANDDIIVNWVNRTLS GQKANDDIIVNWVNRTLSEAGKSTSIQSFK K A N N R T 1 1 3 2 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 2 0 0 12 0 1427.7157 P13797 P13797 519 530 PLS3 Plastin-3 yes yes 2 2.9203E-06 225.22 By MS/MS 5 0 1 1 974610 974610 0 1166 605 1210 2829 2377 2377 1 9774.8 0 ANEEYGLR RGRPGPIGVLLMKSRANEEYGLRLGSQIFV VLLMKSRANEEYGLRLGSQIFVKEMTRTGL R A N L R L 1 1 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 950.44576 Q9UDY2 Q9UDY2 315 322 TJP2 Tight junction protein ZO-2 yes yes 2 0.042956 85.161 By MS/MS 3 0 1 1 279510 279510 0 1167 2712 1211 2830 2378 2378 1 5114.3 0 ANEFLEVGK ______________________________ ENALKRANEFLEVGKKQPALDVLYDVMKSK R A N G K K 1 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1005.5131 Q14152 Q14152 15 23 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00070385 140.45 By MS/MS By matching 3 1.29 1 1 2 1 1 5 1 35835000 35597000 238380 1168 1422 1212 2831;2832;2833;2834;2835;2836 2379;2380;2381;2382;2383;2384 2380 6 1197300 30343 ANEFLEVGKK ______________________________ NALKRANEFLEVGKKQPALDVLYDVMKSKK R A N K K Q 1 0 1 0 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1133.6081 Q14152 Q14152 15 24 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00010587 160.75 By MS/MS 3.57 1.4 2 2 1 1 1 7 43833000 43833000 0 1169 1422 1213 2837;2838;2839;2840;2841;2842;2843 2385;2386;2387;2388 2386 4 1351100 0 ANELFYLSHK SCLPVHIGTLVELNKANELFYLSHKLVDLY VELNKANELFYLSHKLVDLYPSNPVSWFAV K A N H K L 1 0 1 0 0 0 1 0 1 0 2 1 0 1 0 1 0 0 1 0 0 0 10 0 1220.619 Q13042 Q13042 281 290 CDC16 Cell division cycle protein 16 homolog yes yes 2;3 8.6567E-05 154.84 By MS/MS 5 0 2 2 3218500 3218500 0 1170 1347 1214 2844;2845 2389;2390 2389 2 32280 0 ANELPQPPVPEPANAGK TIEDDDYSPPSKRPKANELPQPPVPEPANA ELPQPPVPEPANAGKRKVREFNFEKWNARI K A N G K R 3 0 2 0 0 1 2 1 0 0 1 1 0 0 5 0 0 0 0 1 0 0 17 0 1727.8842 P78347 P78347 327 343 GTF2I General transcription factor II-I yes yes 2 0.00033308 171.36 By MS/MS 4 0.816 1 1 1 3 1723500 1723500 0 1171 1221 1215 2846;2847;2848 2391 2391 1 60500 0 ANENSNIQVLSER IGQTITISRVEGRRRANENSNIQVLSERSA RRANENSNIQVLSERSATEVDNNFSKPPPF R A N E R S 1 1 3 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1472.7219 Q6UN15 Q6UN15 332 344 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2 0.003731 116.84 By MS/MS 5 0 1 1 1055600 1055600 0 1172 1730 1216 2849 2392 2392 0 10588 0 ANEVEQMIR ELQKLEDDAKDNQQKANEVEQMIRDLEASI KDNQQKANEVEQMIRDLEASIARYKEEYAV K A N I R D 1 1 1 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 9 0 1088.5284 Q14204 Q14204 3430 3438 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00083018 136.57 By MS/MS 1.5 0.5 1 1 2 587370 587370 0 1173 1433 1217 2850;2851 2393;2394 2393 2 179290 0 ANEVISK FEAIPRALAENSGVKANEVISKLYAVHQEG LAENSGVKANEVISKLYAVHQEGNKNVGLD K A N S K L 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 759.41267 P50990 P50990 460 466 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0056172 153.04 By MS/MS By matching 6.33 0.471 2 1 2 1 12125000 11997000 127310 1174 984 1218 2852;2853;2854 2395 2395 1 87184 130460 ANGHLLLNSEK AMWPEQSDKWPTAVRANGHLLLNSEKMSKS TAVRANGHLLLNSEKMSKSTGNFLTLTQAI R A N E K M 1 0 2 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1194.6357 Q9P2J5 Q9P2J5 706 716 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2;3 0.001229 117.02 By MS/MS 3.75 0.829 2 1 1 4 1525100 1525100 0 1175 2684 1219 2855;2856;2857;2858 2396;2397 2396 2 54853 0 ANHFFTVTDPR NIKEPRWDQSTFIGRANHFFTVTDPRNILL FIGRANHFFTVTDPRNILLTNEQLESARKI R A N P R N 1 1 1 1 0 0 0 0 1 0 0 0 0 2 1 0 2 0 0 1 0 0 11 0 1303.6309 Q9H9B4 Q9H9B4 25 35 SFXN1 Sideroflexin-1 yes yes 2;3 0.0013358 114.89 By MS/MS 7.5 0.5 2 2 4 38794000 38794000 0 1176 2485 1220 2859;2860;2861;2862 2398;2399 2398 2 494200 0 ANINFLR VHVAKILTFPEKVNKANINFLRKLVQNGPE TFPEKVNKANINFLRKLVQNGPEVHPGANF K A N L R K 1 1 2 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 846.47119 O14802 O14802 399 405 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0010421 175.94 By MS/MS 3 0 1 1 537800 537800 0 1177 139 1221 2863 2400 2400 1 9840.3 0 ANITAIR TEKGISDLAQHYLMRANITAIRRVRKTDNN LAQHYLMRANITAIRRVRKTDNNRIARACG R A N I R R 2 1 1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 7 0 757.44464 P49368 P49368 307 313 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.009865 135.77 By MS/MS By matching 6.4 1.02 1 2 1 1 4 1 36194000 36115000 78675 1178 947 1222 2864;2865;2866;2867;2868 2401;2402;2403 2402 3 325410 80620 ANKITITNDKGR NGILNVTATDKSTGKANKITITNDKGRLSK TGKANKITITNDKGRLSKEEIERMVQEAEK K A N G R L 1 1 2 1 0 0 0 1 0 2 0 2 0 0 0 0 2 0 0 0 0 0 12 2 1329.7365 P0DMV9;P0DMV8;P17066 P0DMV9 498 509 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 3 0.042113 87.719 By MS/MS 5 0 1 1 656850 656850 0 1179 550;639 1223 2869 2404 2404 1 6587.9 0 ANKTPLRPLDPTR KPEGLPHISDVVLDKANKTPLRPLDPTRLQ DKANKTPLRPLDPTRLQGINCGPDFTPSFA K A N T R L 1 2 1 1 0 0 0 0 0 0 2 1 0 0 3 0 2 0 0 0 0 0 13 2 1477.8365 Q04637 Q04637 644 656 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.030951 75.739 By MS/MS 2.5 0.5 1 1 2 2601800 2601800 0 1180 1291 1224 2870;2871 2405 2405 1 788930 0 ANLEKAQAELVGTADEATR EEAVTLDMLDLGAAKANLEKAQAELVGTAD KAQAELVGTADEATRAEIQIRIEANEALVK K A N T R A 5 1 1 1 0 1 3 1 0 0 2 1 0 0 0 0 2 0 0 1 0 0 19 1 1986.0018 P30049 P30049 132 150 ATP5D ATP synthase subunit delta, mitochondrial yes yes 3 0.018324 67.645 By MS/MS 10 0 1 1 333700 333700 0 1181 765 1225 2872 2406 2406 1 17985 0 ANLIVLGAVPR VIDMKNAVIGNNKQKANLIVLGAVPRLLYL NKQKANLIVLGAVPRLLYLLQQETSSTELK K A N P R L 2 1 1 0 0 0 0 1 0 1 2 0 0 0 1 0 0 0 0 2 0 0 11 0 1121.6921 Q8IUR7 Q8IUR7 55 65 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 2.2862E-07 200.54 By MS/MS 6 1 1 1 2 1584500 1584500 0 1182 1860 1226 2873;2874 2407;2408 2407 2 19077 0 ANLPQSFQVDTSK KVKCSGPGLSPGMVRANLPQSFQVDTSKAG VRANLPQSFQVDTSKAGVAPLQVKVQGPKG R A N S K A 1 0 1 1 0 2 0 0 0 0 1 1 0 1 1 2 1 0 0 1 0 0 13 0 1433.7151 P21333 P21333 1465 1477 FLNA Filamin-A yes yes 2 0.00022114 160.56 By MS/MS By matching 1.33 0.471 2 1 2 1 5333900 5298300 35647 1183 677 1227 2875;2876;2877 2409;2410 2410 2 1669400 35647 ANLQIDQINTDLNLER EEQGNTELINDRLKKANLQIDQINTDLNLE NLQIDQINTDLNLERSHAQKNENARQQLER K A N E R S 1 1 3 2 0 2 1 0 0 2 3 0 0 0 0 0 1 0 0 0 0 0 16 0 1868.9592 P35579 P35579 1755 1770 MYH9 Myosin-9 yes yes 2 5.071E-56 338.47 By MS/MS 2 0 1 1 297480 297480 0 1184 824 1228 2878 2411 2411 1 100620 0 ANLSLLR GGRSEEKISDSEGFKANLSLLRRPGEKTYT ISDSEGFKANLSLLRRPGEKTYTQRCRLFV K A N L R R 1 1 1 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 785.47594 P23246 P23246 280 286 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.010698 133.6 By MS/MS 4 0 1 1 786860 786860 0 1185 700 1229 2879 2412 2412 1 74049 0 ANNDAVLKR ______________________________ ______________________________ M A N K R L 2 1 2 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 999.54614 Q12904 Q12904 2 10 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.0012567 134.77 By MS/MS By matching 7.75 0.829 2 1 1 3 1 3345800 3312600 33184 1186 1337 1230 2880;2881;2882;2883 2413 2413 1 52074 59763 ANNGICFLR IGHAKAINFNFGYAKANNGICFLRFDDTNP NFGYAKANNGICFLRFDDTNPEKEEAKFFT K A N L R F 1 1 2 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1063.5233 P47897 P47897 293 301 QARS Glutamine--tRNA ligase yes yes 2 0.035459 82.241 By MS/MS 4.5 0.5 1 1 2 2126000 2126000 0 1187 928 1231 2884;2885 2414 2414 1 163440 0 ANNLHSGDNFQLNDSEIER VSSDSTHVTFYGLLRANNLHSGDNFQLNDS HSGDNFQLNDSEIERQHFKDQDMYSDKSDK R A N E R Q 1 1 4 2 0 1 2 1 1 1 2 0 0 1 0 2 0 0 0 0 0 0 19 0 2171.9832 Q9BZF1 Q9BZF1 300 318 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 3 5.6213E-05 135.08 By MS/MS 4.5 0.5 1 1 2 2815900 2815900 0 1188 2377 1232 2886;2887 2415 2415 1 245400 0 ANNMQEVSR KSPSNKDAALLEAARANNMQEVSRLLSEGA LLEAARANNMQEVSRLLSEGADVNAKHRLG R A N S R L 1 1 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 9 0 1047.4767 Q9H078 Q9H078 144 152 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.00088845 135.43 By MS/MS 5.5 0.5 1 1 2 1758000 1758000 0 1189 2402 1233 2888;2889 2416 2416 1 12440 0 ANNPEQNRLSECEEQAK SLVAEGLATRREGMRANNPEQNRLSECEEQ NPEQNRLSECEEQAKAAKKGMWSEGNGSHT R A N A K A 2 1 3 0 1 2 4 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 17 1 2015.8967 Q7KZF4 Q7KZF4 141 157 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.042093 62.469 By MS/MS 4 0 1 1 846900 846900 0 1190 1755 1234 2890 2417 2417 1 79698 0 ANNSQEPSPQLASSVASTR GTEHLKESEADNTKKANNSQEPSPQLASSV QEPSPQLASSVASTRSMPESLDSPTSGRPG K A N T R S 3 1 2 0 0 2 1 0 0 0 1 0 0 0 2 5 1 0 0 1 0 0 19 0 1942.9344 Q96HC4 Q96HC4 306 324 PDLIM5 PDZ and LIM domain protein 5 yes yes 2 1.2527E-05 131.86 By MS/MS 5 0 1 1 762220 762220 0 1191 2164 1235 2891 2418 2418 0 7644.7 0 ANNSTYGLAAAVFTK MQILKFKTIEEVVGRANNSTYGLAAAVFTK ANNSTYGLAAAVFTKDLDKANYLSQALQAG R A N T K D 4 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 2 0 1 1 0 0 15 0 1526.7729 P05091 P05091 437 451 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.0004229 177.93 By MS/MS 6 0 1 1 2546000 2546000 0 1192 485 1236 2892 2419 2419 1 17502 0 ANPALYVLR GSKPLIQQAMAKIMKANPALYVLRERIRKG MAKIMKANPALYVLRERIRKGLQLYSSEPT K A N L R E 2 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 9 0 1015.5815 Q6P2Q9 Q6P2Q9 1736 1744 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00041228 149.4 By MS/MS 2 0.816 1 1 1 3 1493200 1493200 0 1193 1708 1237 2893;2894;2895 2420;2421;2422 2421 3 449540 0 ANPLSLDSAR NPANDLSDLLRAIPRANPLSLDSARWPLPP RAIPRANPLSLDSARWPLPPLPLSATGSNA R A N A R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1042.5407 O14654 O14654 985 994 IRS4 Insulin receptor substrate 4 yes yes 2 0.00050306 133.23 By MS/MS 4.5 1.12 1 1 1 1 4 3596900 3596900 0 1194 129 1238 2896;2897;2898;2899 2423 2423 1 101110 0 ANQKHQGLK SAVLNGMLDQSFRERANQKHQGLKLATTIL QSFRERANQKHQGLKLATTILQHWKKCDSW R A N L K L 1 0 1 0 0 2 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1022.5621 P78527 P78527 1609 1617 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.010054 129.68 By MS/MS 2 0.816 1 1 1 3 177490 177490 0 1195 1225 1239 2900;2901;2902 2424 2424 1 47216 0 ANQLAEEIESSAQYK LERDNSEEFLKREARANQLAEEIESSAQYK ANQLAEEIESSAQYKARVALENDDRSEEEK R A N Y K A 3 0 1 0 0 2 3 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 15 0 1679.8002 Q99700 Q99700 441 455 ATXN2 Ataxin-2 yes yes 2 5.1101E-33 306.64 By MS/MS 3.5 0.5 1 1 2 1106500 1106500 0 1196 2258 1240 2903;2904 2425 2425 1 67745 0 ANQQETEQFYFTK VSETFMSKPSIAKRRANQQETEQFYFTKMK RRANQQETEQFYFTKMKEYLEGRNLITKLQ R A N T K M 1 0 1 0 0 3 2 0 0 0 0 1 0 2 0 0 2 0 1 0 0 0 13 0 1632.742 O75044 O75044 441 453 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 2 0.00010474 173.04 By MS/MS 3 0 1 1 208150 208150 0 1197 289 1241 2905 2426 2426 1 3808.6 0 ANRGPAYGLSR ______________________________ ______________________________ M A N S R E 2 2 1 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 11 1 1160.6051 P37802 P37802 2 12 TAGLN2 Transgelin-2 yes yes 2 0.0037641 106.88 By MS/MS By matching 9 0 2 1 1 739110 689850 49255 1198 846 1242 2906;2907 2427 2427 1 13576 112320 ANSEEFIPIFANNPR PSLEGRSDREAPGCRANSEEFIPIFANNPR ANSEEFIPIFANNPRELKAFLEHMSEVQPD R A N P R E 2 1 3 0 0 0 2 0 0 2 0 0 0 2 2 1 0 0 0 0 0 0 15 0 1717.8424 Q9H270 Q9H270 588 602 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 6.1529E-24 282.21 By MS/MS 4.5 0.5 1 1 2 1905400 1905400 0 1199 2428 1243 2908;2909 2428;2429 2428 2 135470 0 ANSMGLFLQK ASEFEDPLVGEDTERANSMGLFLQKTNIIR EDTERANSMGLFLQKTNIIRDYLEDQQGGR R A N Q K T 1 0 1 0 0 1 0 1 0 0 2 1 1 1 0 1 0 0 0 0 0 0 10 0 1107.5747 P37268 P37268 204 213 FDFT1 Squalene synthase yes yes 2 0.0056278 121.09 By MS/MS 7 0 1 1 619760 619760 0 1200 845 1244 2910 2430 2430 0 9729.2 0 ANSNLVLQADR ______________________________ YEYKANSNLVLQADRSLIDRTRRDEPTGEV K A N D R S 2 1 2 1 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1199.6258 O75643 O75643 15 25 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 7.7237E-06 175.33 By MS/MS 1.5 0.5 1 1 2 812080 812080 0 1201 340 1245 2911;2912 2431;2432 2432 2 241310 0 ANSSATETINK DENARLQRVQYDLQKANSSATETINKLKVQ DLQKANSSATETINKLKVQEQELTRLRIDY K A N N K L 2 0 2 0 0 0 1 0 0 1 0 1 0 0 0 2 2 0 0 0 0 0 11 0 1134.5517 P15924 P15924 1517 1527 DSP Desmoplakin yes yes 2 4.5962E-13 210.64 By MS/MS By MS/MS 2 1 1 1 1 1 614520 141830 472690 1202 628 1246 2913;2914 2433;2434 2433 2 34176 60167 ANSSVVSVNCK GPKGAQMLREFQWLRANSSVVSVNCKGKDS QWLRANSSVVSVNCKGKDSEKIEEWRSRAA R A N C K G 1 0 2 0 1 0 0 0 0 0 0 1 0 0 0 3 0 0 0 3 0 0 11 0 1163.5605 O60502 O60502 587 597 MGEA5 Protein O-GlcNAcase yes yes 2 4.365E-06 178.46 By MS/MS 3 0 1 1 849440 849440 0 1203 260 1247 2915 2435 2435 1 15542 0 ANSTEYGLASGVFTR ISKFQNGDIDGVLQRANSTEYGLASGVFTR ANSTEYGLASGVFTRDINKAMYVSEKLEAG R A N T R D 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 2 2 0 1 1 0 0 15 0 1571.758 Q3SY69 Q3SY69 848 862 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.00041297 141.59 By MS/MS 4 0 1 1 3361900 3361900 0 1204 1578 1248 2916 2436 2436 1 316370 0 ANSYKNPR DGLCLSESETVNKERANSYKNPRTQDLTAK ETVNKERANSYKNPRTQDLTAKLRKAVEKG R A N P R T 1 1 2 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 8 1 948.47773 Q86XL3 Q86XL3 298 305 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.035372 115.49 By MS/MS 4 0 1 1 318920 318920 0 1205 1845 1249 2917 2437 2437 1 30012 0 ANTFVAELK NPNKIFGVTTLDIVRANTFVAELKGLDPAR TLDIVRANTFVAELKGLDPARVNVPVIGGH R A N L K G 2 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 9 0 991.53385 P40926 P40926 177 185 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 2.0123E-10 209.21 By MS/MS 7 0.816 1 1 1 3 6502400 6502400 0 1206 862 1250 2918;2919;2920 2438;2439 2439 2 82596 0 ANTTAFLTPLEIK PKPSVYLSTPSSASKANTTAFLTPLEIKAK SKANTTAFLTPLEIKAKVETDDVKKNSLDE K A N I K A 2 0 1 0 0 0 1 0 0 1 2 1 0 1 1 0 3 0 0 0 0 0 13 0 1417.7817 Q9Y5K6 Q9Y5K6 558 570 CD2AP CD2-associated protein yes yes 2 9.3303E-47 284.28 By MS/MS 5 0 1 1 0 0 0 1207 2913 1251 2921 2440 2440 1 0 0 ANVADTK ______________________________ ______________________________ M A N T K L 2 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 7 0 717.36572 O60884 O60884 2 8 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 1 0.024368 122.74 By MS/MS 8.67 1.25 1 1 1 3 7292000 7292000 0 1208 285 1252 2922;2923;2924 2441 2441 0 123090 0 ANVAKAEAEK VQAKKLVESLPQEIKANVAKAEAEKIKAAL PQEIKANVAKAEAEKIKAALEAVGGTVVLE K A N E K I 4 0 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1029.5455 P52815 P52815 174 183 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 0.00019249 147.73 By MS/MS 9 0 1 1 1048900 1048900 0 1209 1024 1253 2925 2442 2442 1 20642 0 ANVAKAEAEKIK VQAKKLVESLPQEIKANVAKAEAEKIKAAL EIKANVAKAEAEKIKAALEAVGGTVVLE__ K A N I K A 4 0 1 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 0 1 0 0 12 2 1270.7245 P52815 P52815 174 185 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 3 0.019066 119.34 By MS/MS 9 0 1 1 1093300 1093300 0 1210 1024 1254 2926 2443 2443 1 21517 0 ANVAVVSGAPLQGQLVAR LSQYMGLSLNEEEIRANVAVVSGAPLQGQL AVVSGAPLQGQLVARPSSINYMVAPVTGND R A N A R P 4 1 1 0 0 2 0 2 0 0 2 0 0 0 1 1 0 0 0 4 0 0 18 0 1748.9897 O00560 O00560 68 85 SDCBP Syntenin-1 yes yes 2 4.3065E-34 311.54 By MS/MS 8 0 1 1 2647000 2647000 0 1211 114 1255 2927 2444 2444 1 33418 0 ANVEEER TQQLLERKQAIQELRANVEEERAARLRTAS KQAIQELRANVEEERAARLRTASVPLDAVR R A N E R A 1 1 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 7 0 845.38791 Q96DV4 Q96DV4 115 121 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.0001129 183.26 By MS/MS 7 0 1 1 3870200 3870200 0 1212 2138 1256 2928 2445 2445 1 60756 0 ANVELDHATLVR WSTKDFLQREHRSMRANVELDHATLVRFSP SMRANVELDHATLVRFSPDCRAFIVWLANG R A N V R F 2 1 1 1 0 0 1 0 1 0 2 0 0 0 0 0 1 0 0 2 0 0 12 0 1336.7099 Q9Y4P3 Q9Y4P3 132 143 TBL2 Transducin beta-like protein 2 yes yes 2 1.6914E-05 157.68 By MS/MS 7 0 1 1 4202400 4202400 0 1213 2899 1257 2929 2446 2446 1 65970 0 ANVGAGKKPK KERKNRMKKVRGTAKANVGAGKKPKE____ RGTAKANVGAGKKPKE______________ K A N P K E 2 0 1 0 0 0 0 2 0 0 0 3 0 0 1 0 0 0 0 1 0 0 10 2 968.57671 P62847 P62847 123 132 RPS24 40S ribosomal protein S24 yes yes 2 0.0044501 122.18 By MS/MS 9.5 0.5 1 1 2 358430 358430 0 1214 1175 1258 2930;2931 2447 2447 1 8957.6 0 ANYAVDAYFR IAFTEWIEPPKRERKANYAVDAYFREALRV KRERKANYAVDAYFREALRVSEPKAPKAPR K A N F R E 3 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 0 10 0 1188.5564 O60264;P28370 O60264 740 749 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.0011637 120.45 By MS/MS 3 0 1 1 119580 119580 0 1215 251;755 1259 2932 2448 2448 1 2188 0 APAFLYDIYLR SNHLLYHYWIAVSHKAPAFLYDIYLRMTGR VSHKAPAFLYDIYLRMTGRSPRMMKTITRL K A P L R M 2 1 0 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 2 0 0 0 11 0 1340.7129 Q8WVX9 Q8WVX9 359 369 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.00025973 147.2 By MS/MS 6 0 1 1 372120 372120 0 1216 2031 1260 2933 2449 2449 1 2558 0 APAMFNIR KVVDPFSKKDWYDVKAPAMFNIRNIGKTLV KDWYDVKAPAMFNIRNIGKTLVTRTQGTKI K A P I R N 2 1 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 8 0 918.47456 P61247 P61247 35 42 RPS3A 40S ribosomal protein S3a yes yes 2 0.0019841 143.37 By MS/MS 8.75 0.829 2 1 1 4 16336000 16336000 0 1217 1118 1261;1262 2934;2935;2936;2937 2450;2451;2452 2452 633 3 225230 0 APAPEAEDEEVAR LADVSGKYFDGLKQKAPAPEAEDEEVARRL QKAPAPEAEDEEVARRLWAESARLVGLEAP K A P A R R 4 1 0 1 0 0 4 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 13 0 1382.6314 Q8NBN7 Q8NBN7 295 307 RDH13 Retinol dehydrogenase 13 yes yes 2 0.0088665 92.112 By MS/MS 7 0 1 1 920770 920770 0 1218 1941 1263 2938 2453 2453 1 14454 0 APAQTPAEPTPGYEVGQR SNPSLPLVHPPSHSKAPAQTPAEPTPGYEV QTPAEPTPGYEVGQRKRLISSVEDFTEFV_ K A P Q R K 3 1 0 0 0 2 2 2 0 0 0 0 0 0 4 0 2 0 1 1 0 0 18 0 1867.9064 P49815 P49815 1776 1793 TSC2 Tuberin yes yes 2 3.0584E-17 263.9 By MS/MS 2 0 1 1 547440 547440 0 1219 965 1264 2939 2454 2454 1 185170 0 APASVLPAATPR VEFAVEYFTRLREARAPASVLPAATPRQSL EARAPASVLPAATPRQSLGHPPPEPGPDRV R A P P R Q 4 1 0 0 0 0 0 0 0 0 1 0 0 0 3 1 1 0 0 1 0 0 12 0 1149.6506 P13861 P13861 45 56 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2 0.0015782 114.4 By MS/MS 7 0.816 1 1 1 3 4657300 4657300 0 1220 608 1265 2940;2941;2942 2455 2455 1 37092 0 APAVQDLLTR SLVQEIHHYVTSIAKAPAVQDLLTRLLQAL TSIAKAPAVQDLLTRLLQALHIDGPRSAQV K A P T R L 2 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 10 0 1082.6084 Q9NU22 Q9NU22 3340 3349 MDN1 Midasin yes yes 2 0.00059663 128.03 By MS/MS 1.5 0.5 1 1 2 1174100 1174100 0 1221 2580 1266 2943;2944 2456;2457 2456 2 310300 0 APAVQGADNQR TDNQREEAVHDQRERAPAVQGADNQRAQAR QRERAPAVQGADNQRAQARAGQRAEAAHNQ R A P Q R A 3 1 1 1 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 11 0 1125.5527 Q9H0W5 Q9H0W5 419 429 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 0.0002647 137.46 By MS/MS 4 0 1 1 726740 726740 0 1222 2418 1267 2945 2458 2458 1 68391 0 APDEETLIALLAHAK LKQWEYCGQPKVVVKAPDEETLIALLAHAK APDEETLIALLAHAKMLGLTVSLIQDAGRT K A P A K M 4 0 0 1 0 0 2 0 1 1 3 1 0 0 1 0 1 0 0 0 0 0 15 0 1590.8617 Q9Y3E5 Q9Y3E5 120 134 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 3 0.0048959 101.38 By MS/MS 9 0 1 1 155030 155030 0 1223 2876 1268 2946 2459;2460 2460 2 3051.1 0 APDFVFYAPR SFNDKKFVIKPIDKKAPDFVFYAPRLRINK PIDKKAPDFVFYAPRLRINKRILQLCMGNH K A P P R L 2 1 0 1 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 1 0 0 10 0 1181.5869 P15311 P15311 264 273 EZR Ezrin no no 2 0.00034715 137.13 By MS/MS 5 0 1 1 2374600 2374600 0 1224 624 1269 2947 2461 2461 1 23816 0 APDGYIVK EFKFPPKDGFVALSKAPDGYIVKSQHSGNA GFVALSKAPDGYIVKSQHSGNAQVTQTKFL K A P V K S 1 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 8 0 861.45962 Q92499 Q92499 261 268 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.032507 89.142 By MS/MS 4.5 0.5 1 1 2 2101500 2101500 0 1225 2046 1270 2948;2949 2462;2463 2463 2 105700 0 APDVEQAIEVLTR SSANHSLQLASQIQKAPDVEQAIEVLTRSS QKAPDVEQAIEVLTRSSLEVELAAKEREIA K A P T R S 2 1 0 1 0 1 2 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1439.762 Q13948;P39880 Q13948 284 296 CUX1 Protein CASP;Homeobox protein cut-like 1 yes no 2 0.00050708 135.02 By MS/MS 5 0 1 1 335390 335390 0 1226 1415 1271 2950 2464;2465 2464 2 3363.8 0 APELFSYIAK YSSAAEQLLAEYLERAPELFSYIAKNSQED EYLERAPELFSYIAKNSQEDVFYEDDIWPG R A P A K N 2 0 0 0 0 0 1 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 10 0 1137.607 Q8IZH2 Q8IZH2 994 1003 XRN1 5-3 exoribonuclease 1 yes yes 2 0.039734 83.647 By MS/MS 2 0 1 1 108170 108170 0 1227 1893 1272 2951 2466 2466 1 36589 0 APELLFGAR PNRAYTHQVVTRWYRAPELLFGARMYGVGV VTRWYRAPELLFGARMYGVGVDMWAVGCIL R A P A R M 2 1 0 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 972.53927 P50613 P50613 180 188 CDK7 Cyclin-dependent kinase 7 yes yes 2 0.023365 87.476 By MS/MS 7 0 1 1 311360 311360 0 1228 978 1273 2952 2467 2467 1 4887.8 0 APEPGPAGDGGPGAPAR GDRGLFPASYVQVIRAPEPGPAGDGGPGAP EPGPAGDGGPGAPARYANVPPGGFEPLPVA R A P A R Y 4 1 0 1 0 0 1 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0 17 0 1472.7008 Q96RF0 Q96RF0 61 77 SNX18 Sorting nexin-18 yes yes 2 0.0010619 113.69 By MS/MS 5 0 1 1 362870 362870 0 1229 2221 1274 2953 2468 2468 1 3639.4 0 APEPPPALIVR LLAPVNCPIADFLMKAPEPPPALIVRNAVQ FLMKAPEPPPALIVRNAVQMLKTIDAMDTW K A P V R N 2 1 0 0 0 0 1 0 0 1 1 0 0 0 4 0 0 0 0 1 0 0 11 0 1158.6761 Q9H6S0 Q9H6S0 797 807 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.019582 85.862 By MS/MS 3.5 0.5 1 1 2 714960 714960 0 1230 2458 1275 2954;2955 2469 2469 1 33828 0 APEPTPQQVAQQQ LQMSERNILSRLANRAPEPTPQQVAQQQ__ NRAPEPTPQQVAQQQ_______________ R A P Q Q - 2 0 0 0 0 5 1 0 0 0 0 0 0 0 3 0 1 0 0 1 0 0 13 0 1420.6947 Q14839 Q14839 1900 1912 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.00016132 166.97 By MS/MS 1.5 0.5 1 1 2 388330 388330 0 1231 1459 1276 2956;2957 2470 2470 1 125380 0 APFDLFENK EGQLEFRALLFIPRRAPFDLFENKKKKNNI LFIPRRAPFDLFENKKKKNNIKLYVRRVFI R A P N K K 1 0 1 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 9 0 1079.5288 P08238;Q58FF7 P08238 339 347 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0018102 123.72 By MS/MS 5 0.816 1 1 1 3 6548300 6548300 0 1232 521 1277 2958;2959;2960 2471;2472 2472 2 516030 0 APFDLFENKK EGQLEFRALLFIPRRAPFDLFENKKKKNNI FIPRRAPFDLFENKKKKNNIKLYVRRVFIM R A P K K K 1 0 1 1 0 0 1 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 10 1 1207.6237 P08238;Q58FF7 P08238 339 348 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2;3 0.0010012 140.83 By MS/MS 4 0 2 2 3422500 3422500 0 1233 521 1278 2961;2962 2473;2474 2473 2 322080 0 APFDLFENR EGQLEFRALLFVPRRAPFDLFENRKKKNNI LFVPRRAPFDLFENRKKKNNIKLYVRRVFI R A P N R K 1 1 1 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1107.5349 P07900 P07900 347 355 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.00038098 150.36 By MS/MS 5 0.816 1 1 1 3 6837900 6837900 0 1234 513 1279 2963;2964;2965 2475;2476;2477 2475 3 569890 0 APGAEEYAQQDVLK PGVLHCTTKFCDYGKAPGAEEYAQQDVLKK KAPGAEEYAQQDVLKKSYSKAFTLTISALF K A P L K K 3 0 0 1 0 2 2 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1517.7362 P09543 P09543 262 275 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 2.79E-07 225.55 By MS/MS 6.5 0.5 1 1 2 2354900 2354900 0 1235 537 1280 2966;2967 2478 2478 1 34060 0 APGAEEYAQQDVLKK PGVLHCTTKFCDYGKAPGAEEYAQQDVLKK APGAEEYAQQDVLKKSYSKAFTLTISALFV K A P K K S 3 0 0 1 0 2 2 1 0 0 1 2 0 0 1 0 0 0 1 1 0 0 15 1 1645.8312 P09543 P09543 262 276 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.030326 68.168 By MS/MS 7 0 1 1 2800500 2800500 0 1236 537 1281 2968 2479 2479 1 43963 0 APGAGLGQDR SSSWLTRRAIRPENRAPGAGLGQDRQVPLW RPENRAPGAGLGQDRQVPLWGQLLLFLVFV R A P D R Q 2 1 0 1 0 1 0 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 940.47264 P50402 P50402 212 221 EMD Emerin yes yes 2 0.008962 96.668 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 43839000 43684000 155430 1237 973 1282 2969;2970;2971;2972;2973 2480;2481;2482 2480 3 662330 279930 APGEQTVPALNLQNAFR ATFVKEITYRASNIKAPGEQTVPALNLQNA GEQTVPALNLQNAFRIIKEVQKRYKTREAE K A P F R I 3 1 2 0 0 2 1 1 0 0 2 0 0 1 2 0 1 0 0 1 0 0 17 0 1824.9482 Q9Y5B9 Q9Y5B9 607 623 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00064603 124.38 By MS/MS 1.5 0.5 1 1 2 167180 167180 0 1238 2909 1283 2974;2975 2483;2484 2484 2 50399 0 APGETALIDR NLQILTRRLRFRLERAPGETALIDRTGRML FRLERAPGETALIDRTGRMLKMEPLATVES R A P D R T 2 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1041.5455 Q9ULT8 Q9ULT8 1006 1015 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0044249 106.88 By MS/MS 2 0.816 1 1 1 3 3136700 3136700 0 1239 2774 1284 2976;2977;2978 2485;2486;2487 2485 3 625320 0 APGFAHLAGLDK LVSDGSSRPYRCKIKAPGFAHLAGLDKMSK KIKAPGFAHLAGLDKMSKGHMLADVVAIIG K A P D K M 3 0 0 1 0 0 0 2 1 0 2 1 0 1 1 0 0 0 0 0 0 0 12 0 1195.635 O75306 O75306 426 437 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2;3 0.0010418 112.3 By MS/MS 7 0 2 2 5662000 5662000 0 1240 308 1285 2979;2980 2488;2489 2488 2 88883 0 APGFAQMLK ______________________________ ALHVPKAPGFAQMLKEGAKHFSGLEEAVYR K A P L K E 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 0 0 0 0 0 0 0 9 0 961.50552 P50990 P50990 8 16 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00046787 147.69 By MS/MS 6 0 2 2 13049000 13049000 0 1241 984 1286;1287 2981;2982 2490;2491 2491 533 2 89700 0 APGFGDNR VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM LQVVAVKAPGFGDNRKNQLKDMAIATGGAV K A P N R K 1 1 1 1 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 8 0 832.38277 P10809 P10809 302 309 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.02498 94.114 By MS/MS 6.5 1.12 1 1 1 1 4 15413000 15413000 0 1242 569 1288 2983;2984;2985;2986 2492;2493;2494 2493 3 118500 0 APGFGDNRK VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM QVVAVKAPGFGDNRKNQLKDMAIATGGAVF K A P R K N 1 1 1 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 9 1 960.47773 P10809 P10809 302 310 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.027176 104.06 By MS/MS By matching 5.67 0.471 1 2 2 1 24357000 24316000 40454 1243 569 1289 2987;2988;2989 2495;2496 2496 2 169570 41453 APGIIPR KGPIGSKTRRRVGLKAPGIIPRISVREPMQ TRRRVGLKAPGIIPRISVREPMQTGIKAVD K A P P R I 1 1 0 0 0 0 0 1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 7 0 722.44391 P25705 P25705 176 182 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.013605 126.05 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 26305000 26109000 196850 1244 723 1290 2990;2991;2992;2993;2994 2497 2497 1 192000 201710 APGLGAFR EKMYERMYAALGDPKAPGLGAFRRKFIQTF AALGDPKAPGLGAFRRKFIQTFGKEFDKHF K A P F R R 2 1 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 8 0 787.43407 P78527 P78527 3622 3629 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.030511 89.903 By MS/MS 3 1.41 1 1 1 1 1 5 5340900 5340900 0 1245 1225 1291 2995;2996;2997;2998;2999 2498;2499;2500 2499 3 1006400 0 APGLGLVLER VLERSWGTEKVDVPKAPGLGLVLERVHFEK VDVPKAPGLGLVLERVHFEKYNQRFGNDGL K A P E R V 1 1 0 0 0 0 1 2 0 0 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1023.6077 Q9Y606 Q9Y606 328 337 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.038989 86.136 By MS/MS 7 0 1 1 0 0 0 1246 2929 1292 3000 2501 2501 1 0 0 APGPWDPLASAAGLK PHCLSEEEGEQDRPRAPGPWDPLASAAGLK APGPWDPLASAAGLKEGGKRKKQKQREESK R A P L K E 4 0 0 1 0 0 0 2 0 0 2 1 0 0 3 1 0 1 0 0 0 0 15 0 1449.7616 O75190 O75190 288 302 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 2 0.016006 89.356 By MS/MS 7 0 1 1 197580 197580 0 1247 305 1293 3001 2502;2503 2503 2 3101.6 0 APILIATDVASR QQERDWVLNEFKHGKAPILIATDVASRGLD HGKAPILIATDVASRGLDVEDVKFVINYDY K A P S R G 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1225.703 P17844;Q92841 P17844 392 403 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.00033149 141.91 By MS/MS By MS/MS 6.2 1.17 2 1 1 1 4 1 17424000 17325000 99026 1248 646;2073 1294 3002;3003;3004;3005;3006 2504;2505;2506;2507 2505 4 171950 83161 APIQDIWYHEDR EPVFQRPRVRYGKAKAPIQDIWYHEDRIRA KAKAPIQDIWYHEDRIRAKFYSVYGSGQRA K A P D R I 1 1 0 2 0 1 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 0 12 0 1541.7263 Q9Y3D9 Q9Y3D9 58 69 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 3 0.00035707 136.27 By MS/MS 9 0 1 1 983990 983990 0 1249 2875 1295 3007 2508 2508 1 19365 0 APIQWEER PEISAAVMKIFDAAKAPIQWEERNVTAIQG KIFDAAKAPIQWEERNVTAIQGPGGKWMIP K A P E R N 1 1 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 8 0 1027.5087 P50213 P50213 59 66 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.034535 88.37 By MS/MS 7.5 0.5 1 1 2 2131400 2131400 0 1250 971 1296 3008;3009 2509 2509 1 32961 0 APIVTVGVNNDPADVR NKRTQIVTEIISEIRAPIVTVGVNNDPADV PIVTVGVNNDPADVRKKELKMAEIKVKLIE R A P V R K 2 1 2 2 0 0 0 1 0 1 0 0 0 0 2 0 1 0 0 4 0 0 16 0 1635.858 Q9BPX3 Q9BPX3 471 486 NCAPG Condensin complex subunit 3 yes yes 2 1.1404E-16 258.23 By MS/MS 3.5 0.5 1 1 2 2305100 2305100 0 1251 2279 1297 3010;3011 2510;2511 2510 2 161210 0 APLAVTSQVINCR LSVILMLEVGEGSHRAPLAVTSQVINCRNQ HRAPLAVTSQVINCRNQAVQFISALVDELK R A P C R N 2 1 1 0 1 1 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 13 0 1427.7555 P42695 P42695 319 331 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 8.5979E-09 224.75 By MS/MS 2.5 0.5 1 1 2 625140 625140 0 1252 885 1298 3012;3013 2512 2512 1 62326 0 APLDLDKYVEIAR ______________________________ ______________________________ M A P A R L 2 1 0 2 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 13 1 1501.814 O00743 O00743 2 14 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2;3 0.00014237 182.92 By MS/MS 7.67 0.471 1 2 3 3011900 3011900 0 1253 117 1299 3014;3015;3016 2513;2514 2514 2 38391 0 APLKPYPVSPSDK SVIESHTEFIFTTIKAPLKPYPVSPSDKVL IKAPLKPYPVSPSDKVLIQEKTQLKGSELE K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 P41252 P41252 1039 1051 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.036793 96.334 By MS/MS 3 0 1 1 483530 483530 0 1254 871 1300 3017 2515 2515 1 8847.2 0 APLNETGEVVNEK DPLVEWSKPVKGHSKAPLNETGEVVNEKAK SKAPLNETGEVVNEKAKTHVLDIEQRLQGV K A P E K A 1 0 2 0 0 0 3 1 0 0 1 1 0 0 1 0 1 0 0 2 0 0 13 0 1398.6991 Q13535 Q13535 2575 2587 ATR Serine/threonine-protein kinase ATR yes yes 2 3.0573E-05 181.66 By MS/MS 2 0 1 1 265080 265080 0 1255 1395 1301 3018 2516 2516 1 89662 0 APLQQCAEDR LELPELGCVEMTDLKAPLQQCAEDRQICPS MTDLKAPLQQCAEDRQICPSLAGFQFTQWD K A P D R Q 2 1 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 1186.5401 Q15003 Q15003 304 313 NCAPH Condensin complex subunit 2 yes yes 2 0.0010315 123.75 By MS/MS 4 0 1 1 892770 892770 0 1256 1468 1302 3019 2517 2517 1 84016 0 APLSQLYFCR SDRVLYLVQGEKKVRAPLSQLYFCRYCSEL EKKVRAPLSQLYFCRYCSELRSLECVSHEV R A P C R Y 1 1 0 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 10 0 1253.6227 Q9UJW0 Q9UJW0 22 31 DCTN4 Dynactin subunit 4 yes yes 2 0.00029837 140.45 By MS/MS 6 0 1 1 1745000 1745000 0 1257 2750 1303 3020 2518 2518 1 11996 0 APLVKVEEATVEER KEPQKVANEPSLKGRAPLVKVEEATVEERT RAPLVKVEEATVEERTPAEPEVGPAAPAMA R A P E R T 2 1 0 0 0 0 4 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 14 1 1568.841 Q14244 Q14244 402 415 MAP7 Ensconsin yes yes 2;3 0.00020637 185.57 By MS/MS 4 0 2 2 2649500 2649500 0 1258 1434 1304 3021;3022 2519;2520 2520 2 249330 0 APPAPGPASGGSGEVDELFDVK ______________________________ ASGGSGEVDELFDVKNAFYIGSYQQCINEA M A P V K N 3 0 0 2 0 0 2 4 0 0 1 1 0 1 4 2 0 0 0 2 0 0 22 0 2096.0062 O14579 O14579 2 23 COPE Coatomer subunit epsilon yes yes 2;3 2.9434E-06 144.15 By MS/MS 8 0 2 2 5731500 5731500 0 1259 127 1305 3023;3024 2521;2522;2523 2521 3 72359 0 APPGPAGLSGGESLLVK LELNGAVEPSEGAPRAPPGPAGLSGGESLL PGPAGLSGGESLLVKQIEEQIKRNAAGKDG R A P V K Q 2 0 0 0 0 0 1 4 0 0 3 1 0 0 3 2 0 0 0 1 0 0 17 0 1548.8512 Q9NRL3 Q9NRL3 222 238 STRN4 Striatin-4 yes yes 2 0.00030348 142.12 By MS/MS 4.5 0.5 1 1 2 3515500 3515500 0 1260 2555 1306 3025;3026 2524 2524 1 285880 0 APQETYADIGGLDNQIQEIK MDDTDPLVTVMKVEKAPQETYADIGGLDNQ YADIGGLDNQIQEIKESVELPLTHPEYYEE K A P I K E 2 0 1 2 0 3 2 2 0 3 1 1 0 0 1 0 1 0 1 0 0 0 20 0 2202.0804 P62191 P62191 179 198 PSMC1 26S protease regulatory subunit 4 yes yes 2 1.018E-46 327.1 By MS/MS 6.5 0.5 1 1 2 7635200 7635200 0 1261 1141 1307 3027;3028 2525 2525 1 53962 0 APQLVGQFIAR KLLKDLPELALDTPRAPQLVGQFIARAVGD DTPRAPQLVGQFIARAVGDGILCNTYIDSY R A P A R A 2 1 0 0 0 2 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 11 0 1198.6822 Q53EL6 Q53EL6 257 267 PDCD4 Programmed cell death protein 4 yes yes 2 0.0020893 111.61 By MS/MS 6.5 0.5 1 1 2 2613200 2613200 0 1262 1585 1308 3029;3030 2526 2526 1 21308 0 APQVLVLAPTR IEKLHGELQDRKRGRAPQVLVLAPTRELAN KRGRAPQVLVLAPTRELANQVSKDFSDITK R A P T R E 2 1 0 0 0 1 0 0 0 0 2 0 0 0 2 0 1 0 0 2 0 0 11 0 1163.7026 Q9NR30 Q9NR30 260 270 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.038177 76.143 By MS/MS 4 0 1 1 582190 582190 0 1263 2545 1309 3031 2527 2527 1 54788 0 APRPTIINAENLK GLSRPLRPLRQLVERAPRPTIINAENLKGL ERAPRPTIINAENLKGLDDLDADADDGWAG R A P L K G 2 1 2 0 0 0 1 0 0 2 1 1 0 0 2 0 1 0 0 0 0 0 13 1 1435.8147 Q5JSZ5 Q5JSZ5 347 359 PRRC2B Protein PRRC2B yes yes 2 0.043812 92.112 By MS/MS 2 0 1 1 608380 608380 0 1264 1609 1310 3032 2528 2528 1 205780 0 APSHLSVR ______________________________ ______________________________ M A P V R E 1 1 0 0 0 0 0 0 1 0 1 0 0 0 1 2 0 0 0 1 0 0 8 0 865.477 Q8WUY8 Q8WUY8 2 9 NAT14 N-acetyltransferase 14 yes yes 2 0.018237 101.6 By MS/MS 8 0.816 1 1 1 3 1672800 1672800 0 1265 2020 1311 3033;3034;3035 2529 2529 1 28372 0 APSIIFIDELDAIGTKR GAKLVRDAFALAKEKAPSIIFIDELDAIGT SIIFIDELDAIGTKRFDSEKAGDREVQRTM K A P K R F 2 1 0 2 0 0 1 1 0 4 1 1 0 1 1 1 1 0 0 0 0 0 17 1 1858.02 P17980 P17980 279 295 PSMC3 26S protease regulatory subunit 6A yes yes 3 0.0015066 109.48 By MS/MS 6 0 1 1 415820 415820 0 1266 647 1312 3036 2530 2530 1 2858.5 0 APSTYGGGLSVSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSRF RAPSTYGGGLSVSSRFSSGGACGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 0 1337.6575 CON__P08779;P08779 CON__P08779 42 55 KRT16 Keratin, type I cytoskeletal 16 yes no 2 2.8161E-09 196.67 By MS/MS By MS/MS 4.53 2.85 2 2 3 2 1 2 1 2 8 7 32616000 9364700 23251000 + 1267 47 1313 3037;3038;3039;3040;3041;3042;3043;3044;3045;3046;3047;3048;3049;3050;3051 2531;2532;2533;2534;2535;2536;2537;2538;2539;2540;2541;2542;2543 2534 13 569550 27206000 APSTYGGGLSVSSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSSR APSTYGGGLSVSSSRFSSGGAYGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 5 1 0 1 1 0 0 15 0 1424.6896 CON__P02533;P02533 CON__P02533 42 56 KRT14 Keratin, type I cytoskeletal 14 yes no 2 2.4347E-30 264.3 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 71442000 30321000 41121000 + 1268 39 1314 3052;3053;3054;3055;3056;3057;3058;3059;3060;3061;3062;3063;3064;3065;3066;3067;3068;3069;3070 2544;2545;2546;2547;2548;2549;2550;2551;2552;2553;2554;2555;2556;2557;2558;2559;2560;2561;2562 2547 19 2285800 37281000 APSYIEIFGR MTGMRIQIGTQAIERAPSYIEIFGRTMQLN QAIERAPSYIEIFGRTMQLNLSRSRWFDFP R A P G R T 1 1 0 0 0 0 1 1 0 2 0 0 0 1 1 1 0 0 1 0 0 0 10 0 1151.5975 Q5T4S7 Q5T4S7 2364 2373 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.030959 81.525 By MS/MS 1 0 1 1 122980 122980 0 1269 1633 1315 3071 2563 2563 1 29635 0 APSYLEISSMR GCVVVDGMPPGVSFKAPSYLEISSMRRILD VSFKAPSYLEISSMRRILDSAEFIKFTVIR K A P M R R 1 1 0 0 0 0 1 0 0 1 1 0 1 0 1 3 0 0 1 0 0 0 11 0 1252.6122 P78347 P78347 917 927 GTF2I General transcription factor II-I yes yes 2 1.3684E-05 169.76 By MS/MS 3 0 2 2 958470 958470 0 1270 1221 1316;1317 3072;3073 2564;2565 2565 709 2 17537 0 APTADTQTQNVNQAK SRPKTPFKAWNDTTKAPTADTQTQNVNQAK APTADTQTQNVNQAKMATSQADIETDPGIS K A P A K M 3 0 2 1 0 3 0 0 0 0 0 1 0 0 1 0 3 0 0 1 0 0 15 0 1585.7696 Q9Y5V3 Q9Y5V3 190 204 MAGED1 Melanoma-associated antigen D1 yes yes 2 9.3998E-24 276.35 By MS/MS 4.5 0.5 1 1 2 1970700 1970700 0 1271 2924 1318 3074;3075 2566 2566 1 172760 0 APTIETVVLYTGETPSEQDQGK EIRRQIGKQEGGPFKAPTIETVVLYTGETP VLYTGETPSEQDQGKRIIERDRKRPSWFTQ K A P G K R 1 0 0 1 0 2 3 2 0 1 1 1 0 0 2 1 4 0 1 2 0 0 22 0 2362.154 Q9BYC8 Q9BYC8 151 172 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 3 0.0021186 87.668 By MS/MS 10 0 1 1 103220 103220 0 1272 2366 1319 3076 2567 2567 1 5563.1 0 APTIETVVLYTGETPSEQDQGKR EIRRQIGKQEGGPFKAPTIETVVLYTGETP LYTGETPSEQDQGKRIIERDRKRPSWFTQN K A P K R I 1 1 0 1 0 2 3 2 0 1 1 1 0 0 2 1 4 0 1 2 0 0 23 1 2518.2551 Q9BYC8 Q9BYC8 151 173 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 3 0.052639 50.404 By MS/MS 10 0 1 1 194190 194190 0 1273 2366 1320 3077 2568 2568 1 10466 0 APVIDIGIANTGK YTFTATPEDFPKKHKAPVIDIGIANTGKFI HKAPVIDIGIANTGKFIMTASSDTTVLIWS K A P G K F 2 0 1 1 0 0 0 2 0 3 0 1 0 0 1 0 1 0 0 1 0 0 13 0 1267.7136 Q9Y4P3 Q9Y4P3 189 201 TBL2 Transducin beta-like protein 2 yes yes 2 0.00043238 138.63 By MS/MS 7.5 0.5 1 1 2 4125900 4125900 0 1274 2899 1321 3078;3079 2569 2569 1 63823 0 APVLSDSSCK KSSGSSYPSLLQCLKAPVLSDSSCKSSYPG LQCLKAPVLSDSSCKSSYPGQITGNMICVG K A P C K S 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 3 0 0 0 1 0 0 10 0 1062.5016 CON__P00761 CON__P00761 148 157 yes yes 2 0.0021026 113.71 By MS/MS By MS/MS 5.23 2.83 2 1 1 1 2 1 2 1 1 1 9 4 9650600 7213200 2437400 + 1275 37 1322 3080;3081;3082;3083;3084;3085;3086;3087;3088;3089;3090;3091;3092 2570;2571;2572;2573;2574;2575;2576;2577;2578 2578 8 362780 2643400 APVPGTPDSLSSGSSR SMVAQAMGVYGALTKAPVPGTPDSLSSGSS PVPGTPDSLSSGSSRDVQGTDASLDEELDR K A P S R D 1 1 0 1 0 0 0 2 0 0 1 0 0 0 3 5 1 0 0 1 0 0 16 0 1513.7372 Q9UJZ1 Q9UJZ1 322 337 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.00087743 122.55 By MS/MS By MS/MS 7.75 0.829 2 1 1 3 1 8634700 8459200 175410 1276 2755 1323 3093;3094;3095;3096 2579;2580;2581;2582 2581 4 131980 315910 APVPTGEVYFADSFDR PDTTAPPSSPKVTYKAPVPTGEVYFADSFD PVPTGEVYFADSFDRGTLSGWILSKAKKDD K A P D R G 2 1 0 2 0 0 1 1 0 0 0 0 0 2 2 1 1 0 1 2 0 0 16 0 1769.8261 P27824 P27824 62 77 CANX Calnexin yes yes 2 0.007263 94.688 By MS/MS 4 0 1 1 749290 749290 0 1277 747 1324 3097 2583 2583 1 70513 0 APVQPQQSPAAAPGGTDEKPSGK ______________________________ PAAAPGGTDEKPSGKERRDAGDKDKEQELS K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 Q13200 Q13200 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 8.2703E-05 98.376 By MS/MS 4 0 1 1 475120 475120 0 1278 1365 1325 3098 2584 2584 1 44712 0 APVSYPNTLPESFTK DYTFNVDQKLPAEEKAPVSYPNTLPESFTK APVSYPNTLPESFTKFLQEQRMACEVGLYY K A P T K F 1 0 1 0 0 0 1 0 0 0 1 1 0 1 3 2 2 0 1 1 0 0 15 0 1649.8301 Q8WX92 Q8WX92 399 413 NELFB Negative elongation factor B yes yes 2 0.00060086 157.03 By MS/MS 5 0 1 1 817350 817350 0 1279 2038 1326 3099 2585;2586 2585 2 8197.6 0 APYIAYLTR CRKLLASIAEDYRKRAPYIAYLTRCRQGLQ EDYRKRAPYIAYLTRCRQGLQTTQAHLERL R A P T R C 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 2 0 0 0 9 0 1066.5811 Q14C86 Q14C86 1211 1219 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.010244 100.02 By MS/MS 2 0 1 1 189810 189810 0 1280 1466 1327 3100 2587 2587 1 64202 0 AQAAAPASVPAQAPK RPKAKAKAKAKDQTKAQAAAPASVPAQAPK AQAAAPASVPAQAPKRTQAPTKASE_____ K A Q P K R 7 0 0 0 0 2 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1376.7412 P47914 P47914 135 149 RPL29 60S ribosomal protein L29 yes yes 2 0.00019613 176.87 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 14647000 14601000 45348 1281 929 1328 3101;3102;3103;3104;3105 2588;2589;2590;2591 2590 4 274700 61195 AQAAAPASVPAQAPKR RPKAKAKAKAKDQTKAQAAAPASVPAQAPK QAAAPASVPAQAPKRTQAPTKASE______ K A Q K R T 7 1 0 0 0 2 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1532.8423 P47914 P47914 135 150 RPL29 60S ribosomal protein L29 yes yes 3 0.042657 63.894 By MS/MS 9 0 1 1 727480 727480 0 1282 929 1329 3106 2592 2592 1 14317 0 AQAALAVNISAAR MAAVKTLNPKAEVARAQAALAVNISAARGL ARAQAALAVNISAARGLQDVLRTNLGPKGT R A Q A R G 6 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1254.7044 P40227 P40227 16 28 CCT6A T-complex protein 1 subunit zeta yes yes 2 2.0058E-05 189.17 By MS/MS 6.5 0.5 1 1 2 4398500 4398500 0 1283 858 1330 3107;3108 2593 2593 1 32631 0 AQADFDSCISSQR FEERGEEYLSAFDKKAQADFDSCISSQRIG KKAQADFDSCISSQRIGQELLFPPQENVQD K A Q Q R I 2 1 0 2 1 2 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 13 0 1483.6362 Q5JSZ5 Q5JSZ5 812 824 PRRC2B Protein PRRC2B yes yes 2 0.00085558 136.27 By MS/MS 2 0.816 1 1 1 3 1039900 1039900 0 1284 1609 1331 3109;3110;3111 2594 2594 1 251260 0 AQADKERR MIVNWQQQQRENWEKAQADKERRARLQAEA QRENWEKAQADKERRARLQAEAQELLGYQV K A Q R R A 2 2 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 2 972.51009 Q8TAE8 Q8TAE8 146 153 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.011391 148.04 By MS/MS 9 0 1 1 301300 301300 0 1285 1974 1332 3112 2595 2595 1 5929.7 0 AQAEDYALVSAVATLPK TCFPSEPGLVGPSVRAQAEDYALVSAVATL AEDYALVSAVATLPKQVADHYDNFRIYKAL R A Q P K Q 5 0 0 1 0 1 1 0 0 0 2 1 0 0 1 1 1 0 1 2 0 0 17 0 1745.92 Q96GW9 Q96GW9 442 458 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 2.8444E-11 241.3 By MS/MS 6 0 1 1 1138000 1138000 0 1286 2162 1333 3113 2596 2596 1 7822.9 0 AQAELVGTADEATR LDMLDLGAAKANLEKAQAELVGTADEATRA KAQAELVGTADEATRAEIQIRIEANEALVK K A Q T R A 4 1 0 1 0 1 2 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 14 0 1430.7001 P30049 P30049 137 150 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 3.1475E-07 231.74 By MS/MS By matching 10 0 2 1 1 7708400 7672400 36049 1287 765 1334 3114;3115 2597 2597 1 413510 46153 AQAEQQHNPAANPTMIR FFRLCTEMCVEISYRAQAEQQHNPAANPTM AEQQHNPAANPTMIRAKCYHNLDAFVRLIA R A Q I R A 4 1 2 0 0 3 1 0 1 1 0 0 1 0 2 0 1 0 0 0 0 0 17 0 1875.901 A5YKK6 A5YKK6 1913 1929 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.00084446 115.58 By MS/MS 2 0 1 1 529900 529900 0 1288 19 1335 3116 2598;2599 2599 2 179240 0 AQAISPCVQNFCSALDSK VANRGQFASSGLSMKAQAISPCVQNFCSAL ISPCVQNFCSALDSKLKVKLDDLLAYLPSD K A Q S K L 3 0 1 1 2 2 0 0 0 1 1 1 0 1 1 3 0 0 0 1 0 0 18 0 1994.919 Q8WTW3 Q8WTW3 507 524 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.00025034 168.45 By MS/MS 4 0 1 1 861020 861020 0 1289 2010 1336 3117 2600 2600 1 81028 0 AQAQSILEVLK SLSHRSVVKVLSLRKAQAQSILEVLKITQH SLRKAQAQSILEVLKITQHCAESLGQPHCF K A Q L K I 2 0 0 0 0 2 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1198.6921 O43149 O43149 1583 1593 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.0010779 133.75 By MS/MS 1.5 0.5 1 1 2 152610 152610 0 1290 191 1337 3118;3119 2601;2602 2602 2 46388 0 AQAQTDRESLR QEGPEYWDRNTQIYKAQAQTDRESLRNLRG QIYKAQAQTDRESLRNLRGYYNQSEAGSHT K A Q L R N 2 2 0 1 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 11 1 1273.6375 P01889 P01889 93 103 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 2 0.049823 90.827 By MS/MS 7 0 1 1 1188900 1188900 0 1291 456 1338 3120 2603 2603 1 18663 0 AQAVSEDAGGNEGR EAPGEQARDERSDSRAQAVSEDAGGNEGRA RAQAVSEDAGGNEGRAAEAEPRALENGDAD R A Q G R A 3 1 1 1 0 1 2 3 0 0 0 0 0 0 0 1 0 0 0 1 0 0 14 0 1359.6015 P55884 P55884 121 134 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 5.582E-27 258.65 By MS/MS By MS/MS 3.71 1.83 1 1 1 2 1 1 6 1 2123500 2080400 43124 1292 1065 1339 3121;3122;3123;3124;3125;3126;3127 2604;2605;2606;2607;2608;2609 2607 6 230740 91884 AQAVSEDAGGNEGRAAEAEPR EAPGEQARDERSDSRAQAVSEDAGGNEGRA DAGGNEGRAAEAEPRALENGDADEPSFSDP R A Q P R A 6 2 1 1 0 1 4 3 0 0 0 0 0 0 1 1 0 0 0 1 0 0 21 1 2083.9519 P55884 P55884 121 141 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.00036115 103.41 By MS/MS By MS/MS 4.4 1.02 1 2 1 1 4 1 12082000 11694000 387670 1293 1065 1340 3128;3129;3130;3131;3132 2610;2611;2612 2611 3 805160 826000 AQCPIVER LPHSAGRYAAKRFRKAQCPIVERLTNSMMM AAKRFRKAQCPIVERLTNSMMMHGRNNGKK K A Q E R L 1 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 8 0 971.48585 P46782 P46782 64 71 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.011474 94.302 By MS/MS 9 0.816 1 1 1 3 30437000 30437000 0 1294 919 1341 3133;3134;3135 2613;2614 2613 2 604350 0 AQDEAFALQDVPLSSVVR GLVTLKHVYEIARIKAQDEAFALQDVPLSS EAFALQDVPLSSVVRSIIGSARSLGIRVVK K A Q V R S 3 1 0 2 0 2 1 0 0 0 2 0 0 1 1 2 0 0 0 3 0 0 18 0 1943.9953 Q9Y3B7 Q9Y3B7 125 142 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 2.6295E-05 231.17 By MS/MS 9 0 1 1 1049800 1049800 0 1295 2866 1342 3136 2615;2616 2615 2 20661 0 AQDEGLLSDVVPFK EQDEYALRSHSLAKKAQDEGLLSDVVPFKV KAQDEGLLSDVVPFKVPGKDTVTKDNGIRP K A Q F K V 1 0 0 2 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 2 0 0 14 0 1516.7773 P55084 P55084 255 268 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.00047594 153.81 By MS/MS 6.5 0.5 1 1 2 683450 683450 0 1296 1055 1343 3137;3138 2617;2618 2617 2 6087 0 AQDEGLLSDVVPFKVPGK EQDEYALRSHSLAKKAQDEGLLSDVVPFKV EGLLSDVVPFKVPGKDTVTKDNGIRPSSLE K A Q G K D 1 0 0 2 0 1 1 2 0 0 2 2 0 1 2 1 0 0 0 3 0 0 18 1 1898.0149 P55084 P55084 255 272 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 3 0.0085757 132.4 By MS/MS 6 0 1 1 1356300 1356300 0 1297 1055 1344 3139 2619 2619 1 9323.4 0 AQDEGLLSDVVPFKVPGKDTVTK EQDEYALRSHSLAKKAQDEGLLSDVVPFKV DVVPFKVPGKDTVTKDNGIRPSSLEQMAKL K A Q T K D 1 0 0 3 0 1 1 2 0 0 2 3 0 1 2 1 2 0 0 4 0 0 23 2 2442.3006 P55084 P55084 255 277 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 3 0.019358 69.088 By MS/MS 6.5 0.5 1 1 2 1470700 1470700 0 1298 1055 1345 3140;3141 2620 2620 0 11808 0 AQDIEAGDGTTSVVIIAGSLLDSCTK QVLHPAARMLVELSKAQDIEAGDGTTSVVI SVVIIAGSLLDSCTKLLQKGIHPTIISESF K A Q T K L 3 0 0 3 1 1 1 3 0 3 2 1 0 0 0 3 3 0 0 2 0 0 26 0 2620.2902 P50991 P50991 97 122 CCT4 T-complex protein 1 subunit delta yes yes 3 8.9919E-10 191.9 By MS/MS 7.5 1.5 1 1 2 741340 741340 0 1299 985 1346 3142;3143 2621;2622 2621 2 5565.1 0 AQDIQCGLQSR LEEVFIEVQVPPGTRAQDIQCGLQSRHVAL PGTRAQDIQCGLQSRHVALSVGGREILKGK R A Q S R H 1 1 0 1 1 3 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1274.6037 Q8WVJ2 Q8WVJ2 40 50 NUDCD2 NudC domain-containing protein 2 yes yes 2 5.3227E-06 177.57 By MS/MS 9.5 0.5 1 1 2 437140 437140 0 1300 2026 1347 3144;3145 2623;2624 2624 2 19998 0 AQDLEAAQALAQSER NERKLKKQLKIYMKKAQDLEAAQALAQSER AQDLEAAQALAQSERKRHELNRQVTVQRKE K A Q E R K 5 1 0 1 0 3 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1599.7853 Q9ULV0 Q9ULV0 1434 1448 MYO5B Unconventional myosin-Vb yes yes 2 6.7507E-07 171.11 By MS/MS By MS/MS 2 0 2 1 1 361520 242760 118760 1301 2775 1348 3146;3147 2625;2626;2627 2625 2 82112 167950 AQDQGEKENPMR ______________________________ ______________________________ M A Q M R E 1 1 1 1 0 2 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 12 1 1401.6307 P62913 P62913 2 13 RPL11 60S ribosomal protein L11 yes yes 2 7.1795E-05 159.94 By MS/MS By MS/MS 9 0 4 2 2 2870600 2793200 77425 1302 1186 1349;1350 3148;3149;3150;3151 2628;2629;2630;2631;2632;2633 2633 687 6 54970 176550 AQDQGEKENPMRELR ______________________________ AQDQGEKENPMRELRIRKLCLNICVGESGD M A Q L R I 1 2 1 1 0 2 3 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 15 2 1799.8584 P62913 P62913 2 16 RPL11 60S ribosomal protein L11 yes yes 3 0.018768 61.409 By MS/MS By matching 9.25 0.433 3 1 3 1 3886700 3843000 43732 1303 1186 1351;1352 3152;3153;3154;3155 2634;2635 2634 687 2 78859 99722 AQDTFQTIEGIIR AQFTVLSKLRTPLGRAQDTFQTIEGIIRSL GRAQDTFQTIEGIIRSLAAHTLNPDQDVSQ R A Q I R S 1 1 0 1 0 2 1 1 0 3 0 0 0 1 0 0 2 0 0 0 0 0 13 0 1490.7729 Q96Q15 Q96Q15 936 948 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.00024217 173.04 By MS/MS 1 0 1 1 67924 67924 0 1304 2213 1353 3156 2636;2637 2636 2 16367 0 AQDVLVQEMEVVK EHNPYEKFSKEELKKAQDVLVQEMEVVKQG KKAQDVLVQEMEVVKQGMSHGELSSEAYNQ K A Q V K Q 1 0 0 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 4 0 0 13 0 1486.7701 Q99459 Q99459 632 644 CDC5L Cell division cycle 5-like protein yes yes 2 0.001203 122.46 By MS/MS 4 0 1 1 326810 326810 0 1305 2245 1354 3157 2638 2638 1 30755 0 AQDWEENASR PISKFLNGLEILLAKAQDWEENASRALSLR ILLAKAQDWEENASRALSLRKHLDLISQMI K A Q S R A 2 1 1 1 0 1 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 10 0 1204.5109 Q9NU22 Q9NU22 3784 3793 MDN1 Midasin yes yes 2 0.0024766 111.27 By MS/MS 1.5 0.5 1 1 2 152010 152010 0 1306 2580 1355 3158;3159 2639 2639 1 43040 0 AQEANRLNAENEKDSR TEENQELVTRWMAEKAQEANRLNAENEKDS QEANRLNAENEKDSRRRQARLQKELAEAAK K A Q S R R 3 2 3 1 0 1 3 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 16 2 1843.8773 Q676U5 Q676U5 199 214 ATG16L1 Autophagy-related protein 16-1 yes yes 3 0.0043752 118.71 By MS/MS 5 0 1 1 359910 359910 0 1307 1670 1356 3160 2640 2640 1 3609.7 0 AQELLNEAVGR IQALAYGLCPTQPERAQELLNEAVGRLQGL QPERAQELLNEAVGRLQGLTVPSNSHLVLV R A Q G R L 2 1 1 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1198.6306 Q14674 Q14674 1869 1879 ESPL1 Separin yes yes 2 0.0055999 120.86 By MS/MS 2 0 1 1 336060 336060 0 1308 1449 1357 3161 2641 2641 1 113670 0 AQENYEGSEEVSPPQTK PAAHHMNNPQRTGQRAQENYEGSEEVSPPQ ENYEGSEEVSPPQTKDQ_____________ R A Q T K D 1 0 1 0 0 2 4 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 17 0 1891.8436 Q93008 Q93008 2536 2552 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 1.0582E-33 309.26 By MS/MS 1.5 0.5 1 1 2 270690 270690 0 1309 2085 1358 3162;3163 2642;2643;2644;2645 2643 4 87641 0 AQENYEGSEEVSPPQTKDQ PAAHHMNNPQRTGQRAQENYEGSEEVSPPQ YEGSEEVSPPQTKDQ_______________ R A Q D Q - 1 0 1 1 0 3 4 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 19 1 2134.9291 Q93008 Q93008 2536 2554 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 5.4915E-11 238.65 By MS/MS 2 0 1 1 184860 184860 0 1310 2085 1359 3164 2646;2647 2647 2 62529 0 AQEPESGLSEETQVK DYVAVARGSKDHNIRAQEPESGLSEETQVK AQEPESGLSEETQVKCLMDQATDPNILGRT R A Q V K C 1 0 0 0 0 2 4 1 0 0 1 1 0 0 1 2 1 0 0 1 0 0 15 0 1630.7686 P78527 P78527 4091 4105 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.3595E-16 258.65 By MS/MS 2.5 1.12 1 1 1 1 4 2045300 2045300 0 1311 1225 1360 3165;3166;3167;3168 2648;2649;2650;2651;2652 2648 5 410350 0 AQEREQIK QPLNVKVDPEIQNVKAQEREQIKTLNNKFA PEIQNVKAQEREQIKTLNNKFASFIDKVRF K A Q I K T 1 1 0 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 8 1 1000.5302 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__P12035;P12035;CON__Q14CN4-1;CON__Q6IME9;Q14CN4;CON__Q3SY84;Q3SY84;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46 CON__P35908v2 176 183 KRT2;KRT3;KRT72;KRT71;KRT74;KRT73 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 no no 2;3 0.0088907 158.07 By MS/MS By MS/MS 4.43 2.5 4 2 2 4 4 3 1 1 1 1 13 10 44285000 18068000 26217000 + 1312 55;48;62;60 1361 3169;3170;3171;3172;3173;3174;3175;3176;3177;3178;3179;3180;3181;3182;3183;3184;3185;3186;3187;3188;3189;3190;3191 2653;2654;2655;2656;2657;2658;2659;2660;2661;2662;2663;2664;2665;2666;2667;2668 2668 16 2419900 8209300 AQEREQIKTLNNK QPLNVKVDPEIQNVKAQEREQIKTLNNKFA VKAQEREQIKTLNNKFASFIDKVRFLEQQN K A Q N K F 1 1 2 0 0 2 2 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 13 2 1570.8427 CON__P35908v2;CON__P35908;P35908;CON__P12035;P12035 CON__P35908v2 176 188 KRT2;KRT3 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3 no no 2;3 0.00069658 132.56 By MS/MS By MS/MS 5.09 3.12 1 2 2 1 1 1 1 2 2 9 15405000 599320 14806000 + 1313 55;48 1362 3192;3193;3194;3195;3196;3197;3198;3199;3200;3201;3202 2669;2670;2671;2672;2673;2674;2675 2670 7 127770 5341900 AQETDSPLFLATR LCLEALTPLAEQCAKAQETDSPLFLATRHF AKAQETDSPLFLATRHFLKLVFDMLVLQKH K A Q T R H 2 1 0 1 0 1 1 0 0 0 2 0 0 1 1 1 2 0 0 0 0 0 13 0 1447.7307 Q9C0E2 Q9C0E2 1039 1051 XPO4 Exportin-4 yes yes 2 6.8031E-08 225.55 By MS/MS 3 0 1 1 305280 305280 0 1314 2393 1363 3203 2676 2676 1 5585.8 0 AQFAEATQR DAWEEIRRLAADFQRAQFAEATQRLSERNC AADFQRAQFAEATQRLSERNCIEIVNKLIA R A Q Q R L 3 1 0 0 0 2 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1020.4989 O94874 O94874 18 26 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00031007 155.84 By MS/MS By matching 4 1.29 1 1 2 1 1 3 3 7467900 7354700 113220 1315 372 1364 3204;3205;3206;3207;3208;3209 2677;2678 2677 2 586550 135430 AQFEGIVTDLIR MDSSGPKHLNMKLTRAQFEGIVTDLIRRTI LTRAQFEGIVTDLIRRTIAPCQKAMQDAEV R A Q I R R 1 1 0 1 0 1 1 1 0 2 1 0 0 1 0 0 1 0 0 1 0 0 12 0 1360.7351 P38646 P38646 349 360 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.0136E-08 215.04 By MS/MS 5.4 1.02 1 2 1 1 5 20957000 20957000 0 1316 850 1365 3210;3211;3212;3213;3214 2679;2680;2681;2682;2683 2682 5 206440 0 AQFEGIVTDLIRR MDSSGPKHLNMKLTRAQFEGIVTDLIRRTI TRAQFEGIVTDLIRRTIAPCQKAMQDAEVS R A Q R R T 1 2 0 1 0 1 1 1 0 2 1 0 0 1 0 0 1 0 0 1 0 0 13 1 1516.8362 P38646 P38646 349 361 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0038713 123.75 By MS/MS 5 0 1 1 580010 580010 0 1317 850 1366 3215 2684 2684 1 5817.2 0 AQFFVEDASTASALK SVPFTPIEFHYENTRAQFFVEDASTASALK AQFFVEDASTASALKAVNYKILDRENRRIS R A Q L K A 4 0 0 1 0 1 1 0 0 0 1 1 0 2 0 2 1 0 0 1 0 0 15 0 1583.7831 Q9UBU9 Q9UBU9 159 173 NXF1 Nuclear RNA export factor 1 yes yes 2 0.00088993 125.47 By MS/MS 5 0 1 1 1070700 1070700 0 1318 2705 1367 3216 2685 2685 1 10738 0 AQFLVEK AAVEAKQVAQQEAQRAQFLVEKAKQEQRQK VAQQEAQRAQFLVEKAKQEQRQKIVQAEGE R A Q E K A 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 833.4647 Q99623 Q99623 210 216 PHB2 Prohibitin-2 yes yes 2 0.013694 125.81 By MS/MS 7.5 0.5 1 1 2 58729000 58729000 0 1319 2254 1368 3217;3218 2686;2687 2686 2 816330 0 AQFVRNLVEK ______________________________ ______________________________ M A Q E K T 1 1 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 10 1 1202.6772 O75964 O75964 2 11 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 0.047974 72.607 By MS/MS 10 0 1 1 55943 55943 0 1320 357 1369 3219 2688 2688 1 3015.1 0 AQGPQQQPGSEGPSYAK APDQAAEIGSRGSTKAQGPQQQPGSEGPSY GPQQQPGSEGPSYAKKVALWLAGLLGAGGT K A Q A K K 2 0 0 0 0 4 1 3 0 0 0 1 0 0 3 2 0 0 1 0 0 0 17 0 1728.8067 Q3ZCQ8 Q3ZCQ8 48 64 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 2.759E-24 279.65 By MS/MS 8.5 1.12 1 1 1 1 4 10633000 10633000 0 1321 1580 1370 3220;3221;3222;3223 2689;2690 2690 2 171320 0 AQGPQQQPGSEGPSYAKK APDQAAEIGSRGSTKAQGPQQQPGSEGPSY PQQQPGSEGPSYAKKVALWLAGLLGAGGTV K A Q K K V 2 0 0 0 0 4 1 3 0 0 0 2 0 0 3 2 0 0 1 0 0 0 18 1 1856.9017 Q3ZCQ8 Q3ZCQ8 48 65 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.0031768 94.61 By MS/MS 8 0.816 1 1 1 3 5836600 5836600 0 1322 1580 1371 3224;3225;3226 2691;2692 2691 2 90172 0 AQIDNLTR HQLTMQKEEDTSGYRAQIDNLTRENRSLSE EDTSGYRAQIDNLTRENRSLSEEIKRLKNT R A Q T R E 1 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 8 0 929.49304 P15924 P15924 1393 1400 DSP Desmoplakin yes yes 2 0.010305 98.458 By MS/MS By matching 1.33 0.471 2 1 2 1 924760 734070 190690 1323 628 1372 3227;3228;3229 2693;2694 2694 2 226960 190690 AQIHDLVLVGGSTR LEPVEKALRDAKLDKAQIHDLVLVGGSTRI KAQIHDLVLVGGSTRIPKVQKLLQDFFNGR K A Q T R I 1 1 0 1 0 1 0 2 1 1 2 0 0 0 0 1 1 0 0 2 0 0 14 0 1464.8049 P0DMV9;P0DMV8 P0DMV9 329 342 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0027737 110.25 By MS/MS 6 0.816 1 1 1 3 16374000 16374000 0 1324 550 1373 3230;3231;3232 2695 2695 1 161370 0 AQIWDTAGQER EFATRSIQVDGKTIKAQIWDTAGQERYRAI KTIKAQIWDTAGQERYRAITSAYYRGAVGA K A Q E R Y 2 1 0 1 0 2 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 11 0 1273.6051 P62491;Q15907 P62491 62 72 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 2.5245E-13 238.86 By MS/MS 9 0 1 1 824630 824630 0 1325 1161 1374 3233 2696 2696 1 16229 0 AQKADKNEVAAEVAK MDEVTKQGNIVRELKAQKADKNEVAAEVAK AQKADKNEVAAEVAKLLDLKKQLAVAEGKP K A Q A K L 5 0 1 1 0 1 2 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0 15 2 1570.8315 P56192 P56192 861 875 MARS Methionine--tRNA ligase, cytoplasmic yes yes 3 0.0005356 130.47 By MS/MS 4 0 1 1 1386700 1386700 0 1326 1067 1375 3234 2697 2697 1 130500 0 AQKGELLER GFRRLGTECFLAQMRAQKGELLERLSSARN FLAQMRAQKGELLERLSSARNFSNMDDEEN R A Q E R L 1 1 0 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1042.5771 O43264 O43264 595 603 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2;3 0.0043434 135.55 By MS/MS 3.67 0.471 1 2 3 4130700 4130700 0 1327 200 1376 3235;3236;3237 2698;2699 2699 2 378390 0 AQLCNPGR QGALEELRTELQEVRAQLCNPGRSASHAVP TELQEVRAQLCNPGRSASHAVPASKK____ R A Q G R S 1 1 1 0 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 0 914.43923 Q9H6K4 Q9H6K4 161 168 OPA3 Optic atrophy 3 protein yes yes 2 0.029286 79.451 By MS/MS 9 0 1 1 1660800 1660800 0 1328 2457 1377 3238 2700 2700 1 32686 0 AQLELYPEPLLVANAIK EWDLAQKALDDIIYRAQLELYPEPLLVANA LELYPEPLLVANAIKASLPHGPMKSNKEGT R A Q I K A 3 0 1 0 0 1 2 0 0 1 4 1 0 0 2 0 0 0 1 1 0 0 17 0 1881.0612 Q9BYI3 Q9BYI3 267 283 FAM126A Hyccin yes yes 2 0.00037927 146.59 By MS/MS 6 0 1 1 353940 353940 0 1329 2373 1378 3239 2701;2702 2701 2 2433.1 0 AQLEQGGVGIR AQQYQDIMQRSQWQRAQLEQGGVGIRREYA QWQRAQLEQGGVGIRREYAAQLERQLQFYT R A Q I R R 1 1 0 0 0 2 1 3 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1126.6095 Q6P1N0 Q6P1N0 892 902 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.0011186 119.22 By MS/MS 2.5 0.5 1 1 2 962080 962080 0 1330 1701 1379 3240;3241 2703 2703 1 152350 0 AQLGGPELQR VGDPVLRGVAAPVERAQLGGPELQRLTQRL APVERAQLGGPELQRLTQRLVQVMRRRRCV R A Q Q R L 1 1 0 0 0 2 1 2 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1067.5724 Q9HBH1 Q9HBH1 85 94 PDF Peptide deformylase, mitochondrial yes yes 2 0.022657 85.533 By MS/MS 9.5 0.5 1 1 2 1214800 1214800 0 1331 2504 1380 3242;3243 2704 2704 1 28134 0 AQLLQPTLEINPR HFLRMQQLAKTQEERAQLLQPTLEINPRHA ERAQLLQPTLEINPRHALIKKLNQLRASEP R A Q P R H 1 1 1 0 0 2 1 0 0 1 3 0 0 0 2 0 1 0 0 0 0 0 13 0 1491.8409 Q12931 Q12931 635 647 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00033908 148.28 By MS/MS 6.67 1.25 1 1 1 3 16175000 16175000 0 1332 1340 1381 3244;3245;3246 2705;2706 2705 1 167200 0 AQLTAVTPDTR TEPRACLTSGTPGPRAQLTAVTPDTRTREA PGPRAQLTAVTPDTRTREASENSGTRSRAW R A Q T R T 2 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 3 0 0 1 0 0 11 0 1171.6197 O43464 O43464 81 91 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 0.00016597 146.11 By MS/MS 10 0 1 1 419760 419760 0 1333 212 1382 3247 2707 2707 1 22623 0 AQNAESSLQQK QLEEVKAINLQMFHKAQNAESSLQQKNEAI MFHKAQNAESSLQQKNEAITSFEGKTNQVM K A Q Q K N 2 0 1 0 0 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 11 0 1202.5891 Q96T51 Q96T51 470 480 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 5.4741E-07 196.52 By MS/MS 5 0 1 1 1024400 1024400 0 1334 2238 1383 3248 2708 2708 1 10274 0 AQNEEILYVLR GTRTFSAFHKVLSEKAQNEEILYVLRHYIQ LSEKAQNEEILYVLRHYIQKPSSRKMYLSG K A Q L R H 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1346.7194 Q9NYU1 Q9NYU1 206 216 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 1.5642E-05 167.93 By MS/MS 3 0 1 1 151940 151940 0 1335 2637 1384 3249 2709 2709 1 2780.1 0 AQNISSNANMLR PSAAPIKQVEEKPQRAQNISSNANMLRKGP PQRAQNISSNANMLRKGPAEDMSSKLNQAR R A Q L R K 2 1 3 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 12 0 1317.6459 Q14008 Q14008 1442 1453 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.4372E-05 178.46 By MS/MS 2 0 2 2 1618700 1618700 0 1336 1417 1385;1386 3250;3251 2710;2711 2710 807 2 547530 0 AQNLKDLAGR ______________________________ ______________________________ M A Q G R L 2 1 1 1 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 1 1084.5989 Q99623 Q99623 2 11 PHB2 Prohibitin-2 yes yes 2 0.00030478 139.38 By MS/MS By MS/MS 8 1.1 2 2 1 3 2 27443000 27037000 405850 1337 2254 1387 3252;3253;3254;3255;3256 2712;2713;2714;2715 2714 4 392220 642210 AQPKPLKHEQK QPHQYLQHGAEGSPKAQPKPLKHEQKHTLQ GSPKAQPKPLKHEQKHTLQQHQETPKKKTG K A Q Q K H 1 0 0 0 0 2 1 0 1 0 1 3 0 0 2 0 0 0 0 0 0 0 11 2 1302.7408 Q7Z417 Q7Z417 68 78 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 3 0.054702 66.19 By MS/MS 5 0 1 1 140660 140660 0 1338 1789 1388 3257 2716 2716 1 1410.8 0 AQPLSLEELLAK SKKDEEDEHGDKKPKAQPLSLEELLAKKKA KPKAQPLSLEELLAKKKAEEEAEAKPKFLS K A Q A K K 2 0 0 0 0 1 2 0 0 0 4 1 0 0 1 1 0 0 0 0 0 0 12 0 1310.7446 Q9BUQ8 Q9BUQ8 139 150 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0024803 89.805 By MS/MS 4 0 1 1 612880 612880 0 1339 2326 1389 3258 2717 2717 1 57676 0 AQPSASLGVGYR TYRAQPSVSLGAAYRAQPSASLGVGYRTQP AYRAQPSASLGVGYRTQPMTAQAASYRAQP R A Q Y R T 2 1 0 0 0 1 0 2 0 0 1 0 0 0 1 2 0 0 1 1 0 0 12 0 1204.62 Q96PK6 Q96PK6 251 262 RBM14 RNA-binding protein 14 yes yes 2 0.028548 80.706 By MS/MS 5 0 1 1 345180 345180 0 1340 2210 1390 3259 2718 2718 1 3461.9 0 AQQATPGGAAPTIFSR VRGAAGVTDGNEVAKAQQATPGGAAPTIFS QQATPGGAAPTIFSRILDKSLPADILYEDQ K A Q S R I 4 1 0 0 0 2 0 2 0 1 0 0 0 1 2 1 2 0 0 0 0 0 16 0 1571.8056 Q9BX68 Q9BX68 43 58 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 2 0.00053404 153.81 By MS/MS 10 0 1 1 366730 366730 0 1341 2354 1391 3260 2719 2719 1 19766 0 AQQEAPAVR WKSRRARRDHFSIERAQQEAPAVRKLSSKG HFSIERAQQEAPAVRKLSSKGSFADLGLEP R A Q V R K 3 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 9 0 968.50394 Q9NUL7 Q9NUL7 112 120 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.015228 91.265 By MS/MS 6 0 1 1 4793600 4793600 0 1342 2582 1392 3261 2720 2720 1 32952 0 AQQEDALAQQAFEEAR QRLDGMGCLEFDEERAQQEDALAQQAFEEA QQEDALAQQAFEEARRRTREFEDRDRSHRE R A Q A R R 5 1 0 1 0 4 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 16 0 1803.8388 Q13951 Q13951 132 147 CBFB Core-binding factor subunit beta yes yes 2 1.1259E-16 258.39 By MS/MS 9 0 1 1 3239000 3239000 0 1343 1416 1393 3262 2721 2721 1 63744 0 AQQEFAAGVFSNPAVR RIHSLYRRTGASFQKAQQEFAAGVFSNPAV QQEFAAGVFSNPAVRTAAANAAAGAAENAF K A Q V R T 4 1 1 0 0 2 1 1 0 0 0 0 0 2 1 1 0 0 0 2 0 0 16 0 1690.8427 O14828 O14828 314 329 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 1.6711E-16 300.49 By MS/MS 5.4 3.26 1 1 1 1 1 5 6955600 6955600 0 1344 141 1394 3263;3264;3265;3266;3267 2722;2723;2724;2725 2724 4 185280 0 AQQGIVFLDEVDK VIAKLLQDANYNVEKAQQGIVFLDEVDKIG EKAQQGIVFLDEVDKIGSVPGIHQLRDVGG K A Q D K I 1 0 0 2 0 2 1 1 0 1 1 1 0 1 0 0 0 0 0 2 0 0 13 0 1460.7511 O76031 O76031 350 362 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.028141 81.676 By MS/MS 5 0 1 1 752790 752790 0 1345 360 1395 3268 2726 2726 0 7550.1 0 AQQLLDAVEQR GLGGRPPPQPPREERAQQLLDAVEQRQRQL REERAQQLLDAVEQRQRQLLDTIAACEEML R A Q Q R Q 2 1 0 1 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1269.6677 Q6ZSJ8 Q6ZSJ8 40 50 C1orf122 Uncharacterized protein C1orf122 yes yes 2 0.0025539 114.86 By MS/MS 8.5 0.5 1 1 2 1506300 1506300 0 1346 1745 1396 3269;3270 2727 2727 1 19622 0 AQQNHALLER GLVCGDQRIQVAKTKAQQNHALLERELQRR VAKTKAQQNHALLERELQRRKEQLRVPAVP K A Q E R E 2 1 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1178.6156 Q9NVU0 Q9NVU0 468 477 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.053816 68.893 By MS/MS 5 0 1 1 617460 617460 0 1347 2603 1397 3271 2728 2728 1 6192.8 0 AQQNMKVR ______________________________ ______________________________ M A Q V R P 1 1 1 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 8 1 973.51273 A6NMK8 A6NMK8 2 9 FAM196B Protein FAM196B yes yes 2 0.035632 73.975 By MS/MS 3 0 1 1 309240 309240 0 1348 26 1398 3272 2729 2729 10 1 5658.2 0 AQQNNVEHK VKLDGSRLIKVHLDKAQQNNVEHKVETFSG KVHLDKAQQNNVEHKVETFSGVYKKLTGKD K A Q H K V 1 0 2 0 0 2 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1066.5156 P62081 P62081 161 169 RPS7 40S ribosomal protein S7 yes yes 2 0.0010987 132.76 By MS/MS 9 0 1 1 548680 548680 0 1349 1138 1399 3273 2730;2731 2730 2 10798 0 AQQNNVEHKVETFSGVYK VKLDGSRLIKVHLDKAQQNNVEHKVETFSG NNVEHKVETFSGVYKKLTGKDVNFEFPEFQ K A Q Y K K 1 0 2 0 0 2 2 1 1 0 0 2 0 1 0 1 1 0 1 3 0 0 18 1 2077.0229 P62081 P62081 161 178 RPS7 40S ribosomal protein S7 yes yes 3;4 0.0139 71.143 By MS/MS 9 0 2 2 7166700 7166700 0 1350 1138 1400 3274;3275 2732;2733 2733 2 141040 0 AQQNNVEHKVETFSGVYKK VKLDGSRLIKVHLDKAQQNNVEHKVETFSG NVEHKVETFSGVYKKLTGKDVNFEFPEFQL K A Q K K L 1 0 2 0 0 2 2 1 1 0 0 3 0 1 0 1 1 0 1 3 0 0 19 2 2205.1178 P62081 P62081 161 179 RPS7 40S ribosomal protein S7 yes yes 3;4 0.0026171 93.427 By MS/MS 9 0 2 2 4711700 4711700 0 1351 1138 1401 3276;3277 2734;2735 2735 2 92727 0 AQQNPTLLAELR LRLEHEQASQPTPEKAQQNPTLLAELRLLR PEKAQQNPTLLAELRLLRQRKDELEQRMSA K A Q L R L 2 1 1 0 0 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 12 0 1352.7412 Q9Y4J8;O60941 Q9Y4J8 508 519 DTNA;DTNB Dystrobrevin alpha;Dystrobrevin beta yes no 2 0.028238 80.871 By MS/MS 5 0 1 1 469680 469680 0 1352 2897 1402 3278 2736 2736 1 4710.6 0 AQQPQQPSQEK ARLRQAGSAAPRPPRAQQPQQPSQEKFYSM RPPRAQQPQQPSQEKFYSMAAQIKLLLEIP R A Q E K F 1 0 0 0 0 5 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 11 0 1267.6157 Q8WTW3 Q8WTW3 103 113 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.039281 76.17 By MS/MS 4 0 1 1 187530 187530 0 1353 2010 1403 3279 2737 2737 1 17648 0 AQQQDKPPR GMEDGERPRRRRHGRAQQQDKPPRFRRLKQ RRRHGRAQQQDKPPRFRRLKQERENAARGS R A Q P R F 1 1 0 1 0 3 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 9 1 1066.552 P48634 P48634 1248 1256 PRRC2A Protein PRRC2A yes yes 2;3 0.0038615 138.06 By MS/MS 1.67 0.471 1 2 3 664680 664680 0 1354 938 1404 3280;3281;3282 2738;2739 2738 2 222890 0 AQQQLAFLEGR SAPTAKAPPKATSTRAQQQLAFLEGRKKQL TSTRAQQQLAFLEGRKKQLLQAALRAKQKN R A Q G R K 2 1 0 0 0 3 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1259.6622 Q6P1N0 Q6P1N0 490 500 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 1.8815E-05 164.97 By MS/MS 4 0.816 1 1 1 3 1089400 1089400 0 1355 1701 1405 3283;3284;3285 2740;2741 2740 2 46976 0 AQQQLNSK QELRELRFLQKEEQRAQQQLNSKLQQQREQ LQKEEQRAQQQLNSKLQQQREQIFRRFEQE R A Q S K L 1 0 1 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 915.47739 Q9H2G2 Q9H2G2 844 851 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0076078 113.41 By MS/MS 2 0 1 1 177860 177860 0 1356 2429 1406 3286 2742 2742 1 60159 0 AQQSLELIQSK TEQNERQKVAGDLHKAQQSLELIQSKIVKA DLHKAQQSLELIQSKIVKAAGDTTVIENSD K A Q S K I 1 0 0 0 0 3 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 0 1243.6772 Q86UP2 Q86UP2 1286 1296 KTN1 Kinectin yes yes 2 2.0807E-09 217.02 By MS/MS 3 0 1 1 644480 644480 0 1357 1823 1407 3287 2743 2743 1 11792 0 AQQVSQGLDVLTAK LRARGQGSSPVAMQKAQQVSQGLDVLTAKV KAQQVSQGLDVLTAKVENAARKLEAMTNSK K A Q A K V 2 0 0 1 0 3 0 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1456.7886 P18206 P18206 353 366 VCL Vinculin yes yes 2 2.9521E-11 265.75 By MS/MS By MS/MS 3.33 0.471 2 1 2 1 1493300 1346400 146810 1358 653 1408 3288;3289;3290 2744;2745;2746 2746 3 58219 18686 AQSCPTFLCALPR YAVIPAEKFDLIWNRAQSCPTFLCALPRRE NRAQSCPTFLCALPRREGYEFFVGQWTGTE R A Q P R R 2 1 0 0 2 1 0 0 0 0 2 0 0 1 2 1 1 0 0 0 0 0 13 0 1519.7276 Q5TC12 Q5TC12 191 203 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 yes yes 2 0.00037945 144.1 By MS/MS 7.5 0.5 1 1 2 715390 715390 0 1359 1640 1409 3291;3292 2747;2748 2747 2 9472.1 0 AQSELAAHQK GLKSKTHAVLVALKRAQSELAAHQKKILHV VALKRAQSELAAHQKKILHVDNHIGISIAG R A Q Q K K 3 0 0 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1081.5516 P25786 P25786 52 61 PSMA1 Proteasome subunit alpha type-1 yes yes 2 1.9475E-05 168.26 By MS/MS 8 0 1 1 2228700 2228700 0 1360 724 1410 3293 2749 2749 1 28137 0 AQSELAAHQKK GLKSKTHAVLVALKRAQSELAAHQKKILHV ALKRAQSELAAHQKKILHVDNHIGISIAGL R A Q K K I 3 0 0 0 0 2 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 11 1 1209.6466 P25786 P25786 52 62 PSMA1 Proteasome subunit alpha type-1 yes yes 2 4.8852E-05 166.07 By MS/MS 8 0 1 1 361610 361610 0 1361 724 1411 3294 2750 2750 1 4565.3 0 AQSQLLVPEQK EHCLKFLSAVLAAQKAQSQLLVPEQKDSSS AAQKAQSQLLVPEQKDSSSWYQKLDTKDKP K A Q Q K D 1 0 0 0 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1239.6823 Q01968 Q01968 117 127 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.0052661 103.21 By MS/MS 4 0 1 1 1056100 1056100 0 1362 1273 1412 3295 2751 2751 1 99385 0 AQTAPNKDVQR ESLKKCLSVMEAKVKAQTAPNKDVQREIAD AKVKAQTAPNKDVQREIADLGEALATAVIP K A Q Q R E 2 1 1 1 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1226.6367 P49588 P49588 783 793 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2;3 0.017903 107.55 By MS/MS 6 2 1 1 2 666210 666210 0 1363 951 1413 3296;3297 2752;2753 2753 2 47540 0 AQTEGINISEEALNHLGEIGTK MLYTPQEMKQIIKIRAQTEGINISEEALNH ISEEALNHLGEIGTKTTLRYSVQLLTPANL R A Q T K T 2 0 2 0 0 1 4 3 1 3 2 1 0 0 0 1 2 0 0 0 0 0 22 0 2323.1656 Q9Y265 Q9Y265 379 400 RUVBL1 RuvB-like 1 yes yes 2;3 7.4758E-19 276.75 By MS/MS 6 0 2 2 31339000 31339000 0 1364 2815 1414 3298;3299 2754;2755;2756 2756 3 215430 0 AQVADAFLSK KTTKLQSESQKLEIRAQVADAFLSKFQLTS KLEIRAQVADAFLSKFQLTSDEMSLLRGTR R A Q S K F 3 0 0 1 0 1 0 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1048.5553 Q9Y2V7 Q9Y2V7 150 159 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.022657 85.533 By MS/MS 5 0 1 1 1204500 1204500 0 1365 2845 1415 3300 2757 2757 1 12081 0 AQVADVVVSR DPATHRQKLYTLQDKAQVADVVVSRWLRVT TLQDKAQVADVVVSRWLRVTVAGGVHISGL K A Q S R W 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 10 0 1042.5771 P49327 P49327 1073 1082 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 8.6567E-05 154.84 By MS/MS By matching 5.11 2.42 2 1 1 1 1 1 1 1 8 1 34924000 34834000 89708 1366 946 1416 3301;3302;3303;3304;3305;3306;3307;3308;3309 2758;2759 2758 2 6350600 126860 AQVDPLSALK RHCKYLIRKHRFEEKAQVDPLSALKYLQND RFEEKAQVDPLSALKYLQNDLYITVDHSDP K A Q L K Y 2 0 0 1 0 1 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1040.5866 Q9UL63 Q9UL63 648 657 MKLN1 Muskelin yes yes 2 0.032089 91.584 By MS/MS 5 0 1 1 851440 851440 0 1367 2771 1417 3310 2760 2760 1 8539.5 0 AQVIYTR ELLSKGLIKLVSKHRAQVIYTRNTKGGDAP IKLVSKHRAQVIYTRNTKGGDAPAAGEDA_ R A Q T R N 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 7 0 849.47085 P62851 P62851 105 111 RPS25 40S ribosomal protein S25 yes yes 2 0.020574 111.82 By MS/MS 9.5 0.5 1 1 2 70334000 70334000 0 1368 1176 1418 3311;3312 2761;2762;2763 2761 3 2041900 0 AQVLAGGR YAIAKKLGSKDVVIKAQVLAGGRGKGTFES SKDVVIKAQVLAGGRGKGTFESGLKGGVKI K A Q G R G 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 770.43989 Q9P2R7 Q9P2R7 99 106 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.0091878 111.65 By MS/MS 7 0 1 1 2478300 2478300 0 1369 2690 1419 3313 2764 2764 1 38905 0 AQVQLQLFK EEADRYQRLKDEVVRAQVQLQLFKLYHNEV KDEVVRAQVQLQLFKLYHNEVEIEKLNKEL R A Q F K L 1 0 0 0 0 3 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1073.6233 Q14683 Q14683 219 227 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00068633 140.98 By MS/MS 3 0 1 1 358330 358330 0 1370 1451 1420 3314 2765 2765 1 6556.5 0 AQVSGQSAR FQNVADLHLYLYSAKAQVSGQSARKMRLGD YLYSAKAQVSGQSARKMRLGDAVEQGVINN K A Q A R K 2 1 0 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 9 0 902.45699 P41250 P41250 380 388 GARS Glycine--tRNA ligase yes yes 2 0.0048784 109.44 By MS/MS 5.5 0.5 1 1 2 416730 416730 0 1371 870 1421 3315;3316 2766 2766 1 3605.5 0 AQVSLLIR SVVAKFNASQLITQRAQVSLLIRRELTERA SQLITQRAQVSLLIRRELTERAKDFSLILD R A Q I R R 1 1 0 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 0 898.56 Q99623 Q99623 158 165 PHB2 Prohibitin-2 yes yes 2 0.00018233 171.53 By MS/MS By matching 7.8 0.748 2 2 1 3 2 22922000 22652000 269910 1372 2254 1422 3317;3318;3319;3320;3321 2767;2768 2768 2 325990 448390 AQVSLLIRR SVVAKFNASQLITQRAQVSLLIRRELTERA QLITQRAQVSLLIRRELTERAKDFSLILDD R A Q R R E 1 2 0 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 1 1054.6611 Q99623 Q99623 158 166 PHB2 Prohibitin-2 yes yes 2 0.037958 98.523 By MS/MS 7.5 0.5 1 1 2 2354500 2354500 0 1373 2254 1423 3322;3323 2769;2770 2769 2 33772 0 AQVTSLLGELQESQSR KRCQQQMAEDKASVKAQVTSLLGELQESQS QVTSLLGELQESQSRLEAATKECQALEGRA K A Q S R L 1 1 0 0 0 3 2 1 0 0 3 0 0 0 0 3 1 0 0 1 0 0 16 0 1744.8955 Q9Y6K9 Q9Y6K9 144 159 IKBKG NF-kappa-B essential modulator yes yes 2 1.3506E-33 311.95 By MS/MS 6.5 0.5 1 1 2 2443300 2443300 0 1374 2947 1424 3324;3325 2771 2771 1 20038 0 AQYDDIVTR NSRDLNMDCIIAEIKAQYDDIVTRSRAEAE IIAEIKAQYDDIVTRSRAEAESWYRSKCEE K A Q T R S 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 9 0 1079.5247 CON__O43790;CON__Q14533;O43790;Q14533 CON__O43790 280 288 KRT86;KRT81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 yes no 2 0.0053004 122.94 By MS/MS 10 0 1 1 779670 0 779670 + 1375 35 1425 3326 2772 2772 1 0 998200 AQYEDIAQK NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE IIAEVKAQYEDIAQKSKAEAESLYQSKYEE K A Q Q K S 2 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1064.5138 P04264 P04264 356 364 KRT1 Keratin, type II cytoskeletal 1 yes yes 2 5.3027E-07 190.62 By MS/MS By MS/MS 4.95 2.65 2 2 3 2 2 2 2 2 1 1 10 9 611070000 277080000 333990000 1376 471 1426 3327;3328;3329;3330;3331;3332;3333;3334;3335;3336;3337;3338;3339;3340;3341;3342;3343;3344;3345 2773;2774;2775;2776;2777;2778;2779;2780;2781;2782;2783;2784;2785;2786;2787;2788;2789;2790;2791;2792;2793;2794;2795;2796;2797;2798;2799 2793 27 18857000 143060000 AQYEDIAQKSK NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE AEVKAQYEDIAQKSKAEAESLYQSKYEELQ K A Q S K A 2 0 0 1 0 2 1 0 0 1 0 2 0 0 0 1 0 0 1 0 0 0 11 1 1279.6408 P04264 P04264 356 366 KRT1 Keratin, type II cytoskeletal 1 yes yes 2;3 1.1606E-18 247.96 By matching By MS/MS 5 2.93 2 3 3 2 2 2 1 2 3 3 17 8265700 303040 7962700 1377 471 1427 3346;3347;3348;3349;3350;3351;3352;3353;3354;3355;3356;3357;3358;3359;3360;3361;3362;3363;3364;3365 2800;2801;2802;2803;2804;2805;2806;2807;2808;2809;2810;2811;2812;2813;2814;2815;2816;2817;2818 2806 19 36357 4581000 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1092.52 CON__P13647;P13647 CON__P13647 344 352 KRT5 Keratin, type II cytoskeletal 5 yes no 2 7.9332E-09 209.58 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 49184000 24866000 24318000 + 1378 52 1428 3366;3367;3368;3369;3370;3371;3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382;3383;3384 2819;2820;2821;2822;2823;2824;2825;2826;2827;2828;2829;2830;2831;2832;2833;2834;2835;2836;2837;2838 2820 20 1914800 12673000 AQYEEIAQR NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE IIAEVKAQYEEIAQRSKEEAEALYHSKYEE K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1106.5356 CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__P04259;CON__P48668;P48668;CON__ENSEMBL:ENSBTAP00000038253 CON__P35908v2 354 362 KRT2;KRT6A;KRT6C Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 6.7675E-05 174.02 By MS/MS By MS/MS 5.47 2.94 2 2 2 2 2 1 2 2 2 2 10 9 142130000 75899000 66235000 + 1379 55;44;56;40;34 1429 3385;3386;3387;3388;3389;3390;3391;3392;3393;3394;3395;3396;3397;3398;3399;3400;3401;3402;3403 2839;2840;2841;2842;2843;2844;2845;2846;2847;2848;2849;2850;2851;2852;2853;2854;2855;2856;2857;2858;2859 2855 21 5065700 39132000 AQYQDKLAR RRKTLSEETRQHQARAQYQDKLARQRYEDQ RQHQARAQYQDKLARQRYEDQLKQQQLLNE R A Q A R Q 2 1 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 9 1 1091.5724 Q9NVI7;Q5T9A4 Q5T9A4 130 138 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 0.0061197 123.86 By MS/MS 5 0 1 1 2337800 2337800 0 1380 2598;1638 1430 3404 2860 2860 1 23447 0 AQYYLPDGSTIEIGPSR LSINPQKDETLETEKAQYYLPDGSTIEIGP YYLPDGSTIEIGPSRFRAPELLFRPDLIGE K A Q S R F 1 1 0 1 0 1 1 2 0 2 1 0 0 0 2 2 1 0 2 0 0 0 17 0 1865.9159 P61163 P61163 239 255 ACTR1A Alpha-centractin yes yes 2 0.00035385 170.26 By MS/MS 7 0 2 2 1414600 1414600 0 1381 1113 1431 3405;3406 2861;2862 2862 2 22207 0 ARAEEAAGQLR LLRLGARVIMGCRDRARAEEAAGQLRRELR CRDRARAEEAAGQLRRELRQAAECGPEPGV R A R L R R 4 2 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 1 1170.6105 Q9HBH5 Q9HBH5 78 88 RDH14 Retinol dehydrogenase 14 yes yes 2 0.027298 102.53 By MS/MS 8 0 1 1 374950 374950 0 1382 2505 1432 3407 2863 2863 1 4733.7 0 ARAEEAAGQLRR LLRLGARVIMGCRDRARAEEAAGQLRRELR RDRARAEEAAGQLRRELRQAAECGPEPGVS R A R R R E 4 3 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 12 2 1326.7116 Q9HBH5 Q9HBH5 78 89 RDH14 Retinol dehydrogenase 14 yes yes 3 0.0038369 105.03 By MS/MS 8 0 1 1 1702700 1702700 0 1383 2505 1433 3408 2864 2864 1 21496 0 ARDAAGSGDKPGADTGR LTALEMLTAFASHIRARDAAGSGDKPGADT DAAGSGDKPGADTGR_______________ R A R G R - 4 2 0 3 0 0 0 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 17 2 1600.7554 Q96EL3 Q96EL3 96 112 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 3 0.0090413 88.637 By MS/MS 10 0 1 1 319140 319140 0 1384 2146 1434 3409 2865 2865 1 17201 0 ARDDLITDLLNEAK QMSNLMNQARLKVLRARDDLITDLLNEAKQ RARDDLITDLLNEAKQRLSKVVKDTTRYQV R A R A K Q 2 1 1 3 0 0 1 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 14 1 1585.8312 P36543 P36543 86 99 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 2;3 0.010367 129.76 By MS/MS 8 0 2 2 332150 332150 0 1385 836 1435 3410;3411 2866;2867 2866 2 4193.4 0 ARDYDAMGSQTK KATGKISKLGRSFTRARDYDAMGSQTKFVQ FTRARDYDAMGSQTKFVQCPDGELQKRKEV R A R T K F 2 1 0 2 0 1 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 12 1 1341.5983 Q9Y230 Q9Y230 212 223 RUVBL2 RuvB-like 2 yes yes 2 0.021626 142.1 By MS/MS 6 0 1 1 316010 316010 0 1386 2810 1436 3412 2868 2868 1175 1 2172.3 0 AREESWGPPR WRPLVKPGGWREKEKAREESWGPPRESRPS REKEKAREESWGPPRESRPSEEREWDREKE K A R P R E 1 2 0 0 0 0 2 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 10 1 1183.5734 Q14152 Q14152 1184 1193 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0071422 129.85 By MS/MS 3 0 1 1 1051100 1051100 0 1387 1422 1437 3413 2869 2869 1 19232 0 AREQLAAVR QVRLPDGTSLTQTFRAREQLAAVRLYVELH LTQTFRAREQLAAVRLYVELHRGEELGGGQ R A R V R L 3 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 1 1012.5778 Q04323 Q04323 232 240 UBXN1 UBX domain-containing protein 1 yes yes 2;3 0.0094859 122.33 By MS/MS 7 0 2 2 2202900 2202900 0 1388 1289 1438 3414;3415 2870;2871 2871 2 34582 0 AREVISHIGK LFRRSPRPKGDFSSRAREVISHIGKLRDFL DFSSRAREVISHIGKLRDFLLEHRKDYINA R A R G K L 1 1 0 0 0 0 1 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 10 1 1108.6353 Q9P2W9 Q9P2W9 53 62 STX18 Syntaxin-18 yes yes 3 0.0045414 100.69 By MS/MS 7 0 1 1 2086700 2086700 0 1389 2691 1439 3416 2872 2872 1 32757 0 AREVLLASQK HPMMITNAERLRRKRAREVLLASQKTDAEA LRRKRAREVLLASQKTDAEATDTEATET__ R A R Q K T 2 1 0 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 1 1113.6506 Q9Y3D3 Q9Y3D3 115 124 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.00058563 153.1 By MS/MS 10 0 1 1 1912600 1912600 0 1390 2871 1440 3417 2873 2873 1 103080 0 AREVLLASQKTDAEATDTEATET HPMMITNAERLRRKRAREVLLASQKTDAEA QKTDAEATDTEATET_______________ R A R E T - 5 1 0 2 0 1 4 0 0 0 2 1 0 0 0 1 5 0 0 1 0 0 23 2 2449.182 Q9Y3D3 Q9Y3D3 115 137 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 3 3.1651E-07 130.01 By MS/MS 10 0 1 1 1356400 1356400 0 1391 2871 1441 3418 2874 2874 1 73107 0 ARFEELCSDLFR DSLFEGIDFYTSITRARFEELCSDLFRSTL ITRARFEELCSDLFRSTLEPVEKALRDAKL R A R F R S 1 2 0 1 1 0 2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 12 1 1541.7297 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 300 311 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 1.018E-07 206.36 By MS/MS 5.5 0.5 1 1 2 13474000 13474000 0 1392 550;639 1442 3419;3420 2875 2875 1 124730 0 ARFEELNADLFR DSLYEGIDFYTSITRARFEELNADLFRGTL ITRARFEELNADLFRGTLDPVEKALRDAKL R A R F R G 2 2 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 12 1 1479.747 P11142;P54652 P11142 300 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 1.1957E-07 190.36 By MS/MS 6.5 1.12 2 2 2 2 8 109530000 109530000 0 1393 572 1443 3421;3422;3423;3424;3425;3426;3427;3428 2876;2877;2878;2879;2880;2881;2882 2877 5 1062700 0 ARFVVEKAEQQK EAVEAKQVAQQEAERARFVVEKAEQQKKAA AERARFVVEKAEQQKKAAIISAEGDSKAAE R A R Q K K 2 1 0 0 0 2 2 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 12 2 1431.7834 P35232 P35232 196 207 PHB Prohibitin yes yes 3 0.0021994 110.64 By MS/MS 8 0 1 1 878120 878120 0 1394 814 1444 3429 2883 2883 1 11086 0 ARGITINAAHVEYSTAAR KFKKYEEIDNAPEERARGITINAAHVEYST ITINAAHVEYSTAARHYAHTDCPGHADYVK R A R A R H 5 2 1 0 0 0 1 1 1 2 0 0 0 0 0 1 2 0 1 1 0 0 18 1 1899.9915 P49411 P49411 103 120 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.003044 93.812 By MS/MS 7 0 1 1 4872200 4872200 0 1395 949 1445 3430 2884 2884 1 76485 0 ARHEVLLISAEQDKR SNQIKITGTKEGIEKARHEVLLISAEQDKR ARHEVLLISAEQDKRAVERLEVEKAFHPFI K A R K R A 2 2 0 1 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 15 2 1763.9642 Q00341 Q00341 208 222 HDLBP Vigilin yes yes 3;4 0.0023753 100.54 By MS/MS 4.2 1.17 2 1 1 1 5 2477100 2477100 0 1396 1260 1446 3431;3432;3433;3434;3435 2885;2886 2885 2 57503 0 ARLEVENQAK SGIEVIENDLLFIARARLEVENQAKRLLEQ LFIARARLEVENQAKRLLEQGLETQNPTQV R A R A K R 2 1 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1156.62 Q9UP83 Q9UP83 235 244 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 5.746E-05 173.39 By MS/MS 4.5 0.5 1 1 2 1166100 1166100 0 1397 2797 1447 3436;3437 2887 2887 1 94884 0 ARLTEGCSFR CVGCSTVLCQPTGGKARLTEGCSFRRKQH_ PTGGKARLTEGCSFRRKQH___________ K A R F R R 1 2 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 10 1 1195.5768 P42677;Q71UM5 P42677 71 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 3 0.010902 88.155 By MS/MS 10 0 1 1 200060 200060 0 1398 882;1752 1448 3438 2888 2888 1 10782 0 ARNQITQLESLK HVQHQLHVILKELRKARNQITQLESLKQLH LRKARNQITQLESLKQLHEFAITEPLVTFQ K A R L K Q 1 1 1 0 0 2 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 12 1 1399.7783 Q53EZ4 Q53EZ4 387 398 CEP55 Centrosomal protein of 55 kDa yes yes 2 0.045519 91.265 By MS/MS 5 0 1 1 192540 192540 0 1399 1586 1449 3439 2889 2889 1 1931.1 0 ARPAAASPR RLREEARLREDAPLRARPAAASPRAEPWLS EDAPLRARPAAASPRAEPWLSQPASGSAYA R A R P R A 4 2 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 9 1 895.4988 Q8NC56 Q8NC56 76 84 LEMD2 LEM domain-containing protein 2 yes yes 2 0.0079635 126.24 By MS/MS 6 0 1 1 1523400 1523400 0 1400 1948 1450 3440 2890 2890 1 10472 0 ARPATDSFDDYPPR RDRNRDSDKTDTDWRARPATDSFDDYPPRR RARPATDSFDDYPPRRGDDSFGDKYRDRYD R A R P R R 2 2 0 3 0 0 0 0 0 0 0 0 0 1 3 1 1 0 1 0 0 0 14 1 1606.7376 P23588 P23588 201 214 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0030678 132.03 By MS/MS 5 0 1 1 1410600 1410600 0 1401 708 1451 3441 2891 2891 1 14147 0 ARPELEELLAK SVKEHTEEDFKGRFKARPELEELLAKLK__ GRFKARPELEELLAKLK_____________ K A R A K L 2 1 0 0 0 0 3 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 11 1 1267.7136 Q96GC5 Q96GC5 200 210 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2;3 0.0001065 187.42 By MS/MS 9 0 2 2 6104200 6104200 0 1402 2158 1452 3442;3443 2892;2893 2893 2 120130 0 ARPFPDGLAEDIDKGEVSAR CLSKSPNKHNRLYMKARPFPDGLAEDIDKG DGLAEDIDKGEVSARQELKQRARYLAEKYE K A R A R Q 3 2 0 3 0 0 2 2 0 1 1 1 0 1 2 1 0 0 0 1 0 0 20 2 2142.0705 P13639 P13639 606 625 EEF2 Elongation factor 2 yes yes 3 0.00054315 101.49 By MS/MS 4.5 0.5 1 1 2 1456200 1456200 0 1403 602 1453 3444;3445 2894 2894 0 80504 0 ARVECQSHR AFAGLTADARIVINRARVECQSHRLTVEDP RIVINRARVECQSHRLTVEDPVTVEYITRY R A R H R L 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 9 1 1141.5411 O14818 O14818 87 95 PSMA7 Proteasome subunit alpha type-7 yes yes 2;3 0.0040251 137.05 By MS/MS 8 0 2 2 2267200 2267200 0 1404 140 1454 3446;3447 2895;2896 2896 2 28624 0 ARVEENFLK FRLNREGKQKADKNRARVEENFLKLTHVQR KADKNRARVEENFLKLTHVQRQEAAQSRRE R A R L K L 1 1 1 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1104.5928 Q96A33 Q96A33 411 419 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 0.0023949 148.52 By MS/MS 6 0 1 1 0 0 0 1405 2101 1455 3448 2897 2897 1 0 0 ARWTETYVR IFWNDVKDPVSIEERARWTETYVRWSPKGT VSIEERARWTETYVRWSPKGTYLATFHQRG R A R V R W 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 9 1 1180.5989 P55884 P55884 333 341 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.0071394 128.36 By MS/MS 4.4 1.02 1 2 1 1 5 8814300 8814300 0 1406 1065 1456 3449;3450;3451;3452;3453 2898;2899 2898 2 600130 0 ARYEEIAR NNRYLDFSSIITEVRARYEEIARSSKAEAE SIITEVRARYEEIARSSKAEAEALYQTKVY R A R A R S 2 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 8 1 1006.5196 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 287 294 KRT78 Keratin, type II cytoskeletal 78 yes no 3 0.0057584 117.04 By MS/MS 3.5 0.5 1 1 2 422070 0 422070 + 1407 70 1457 3454;3455 2900 2900 1 0 120510 ASAAGAECELAR ACDAWKKEAEEAGERASAAGAECELAREQR GERASAAGAECELAREQRDALEVQVKKLQE R A S A R E 5 1 0 0 1 0 2 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1204.5506 Q9C0B0 Q9C0B0 689 700 UNK RING finger protein unkempt homolog yes yes 2 0.00052066 150.04 By MS/MS 4 0 1 1 0 0 0 1408 2388 1458 3456 2901 2901 1 0 0 ASAAPKPEPVPVQK KIKGCTGSLNMTLQRASAAPKPEPVPVQKG RASAAPKPEPVPVQKGEPKEVVKPVPITSP R A S Q K G 3 0 0 0 0 1 1 0 0 0 0 2 0 0 4 1 0 0 0 2 0 0 14 1 1417.7929 Q96HC4 Q96HC4 84 97 PDLIM5 PDZ and LIM domain protein 5 yes yes 2;3 0.0056783 98.182 By MS/MS 5 0 2 2 1809000 1809000 0 1409 2164 1459 3457;3458 2902;2903 2902 2 18143 0 ASAAQLR KEEESAGGTKGSSKKASAAQLRIQKDINEL GTKGSSKKASAAQLRIQKDINELNLPKTCD K A S L R I 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 715.39769 P61081 P61081 27 33 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.03068 104.21 By MS/MS 9 0 1 1 639270 639270 0 1410 1108 1460 3459 2904 2904 1 12581 0 ASAAVESFVTK ______________________________ ______________________________ M A S T K Q 3 0 0 0 0 0 1 0 0 0 0 1 0 1 0 2 1 0 0 2 0 0 11 0 1108.5764 P38935 P38935 2 12 IGHMBP2 DNA-binding protein SMUBP-2 yes yes 2 0.00027223 139.43 By MS/MS 4 0 1 1 350700 350700 0 1411 852 1461 3460 2905 2905 1 33003 0 ASAFALQEQPVVNAVIDDTTK KKHNLKLGFMSAFVKASAFALQEQPVVNAV QEQPVVNAVIDDTTKEVVYRDYIDISVAVA K A S T K E 4 0 1 2 0 2 1 0 0 1 1 1 0 1 1 1 2 0 0 3 0 0 21 0 2216.1325 P36957 P36957 287 307 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 1.0797E-26 287.03 By MS/MS 6 0 1 1 3812700 3812700 0 1412 842 1462 3461 2906 2906 1 26210 0 ASAGPQPLLVQSCK TQTIAAAQHAASTPKASAGPQPLLVQSCKA KASAGPQPLLVQSCKAVAEQIPLLVQGVRG K A S C K A 2 0 0 0 1 2 0 1 0 0 2 1 0 0 2 2 0 0 0 1 0 0 14 0 1454.7551 Q9Y490 Q9Y490 944 957 TLN1 Talin-1 yes yes 2 3.2646E-05 193.22 By MS/MS 2.5 0.5 1 1 2 4516200 4516200 0 1413 2888 1463 3462;3463 2907;2908;2909 2908 3 1177100 0 ASALEQFVNSVR ______________________________ ______________________________ M A S V R Q 2 1 1 0 0 1 1 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 12 0 1319.6834 Q9UNS2 Q9UNS2 2 13 COPS3 COP9 signalosome complex subunit 3 yes yes 2 5.9181E-06 186.87 By MS/MS 7 0 1 1 129860 129860 0 1414 2793 1464 3464 2910 2910 1 2038.5 0 ASAPAPGHH VYKIRAADKRSKALKASAPAPGHH______ RSKALKASAPAPGHH_______________ K A S H H - 3 0 0 0 0 0 0 1 2 0 0 0 0 0 2 1 0 0 0 0 0 0 9 0 843.39875 P56378 P56378 50 58 MP68 6.8 kDa mitochondrial proteolipid yes yes 2 0.0014091 128.82 By MS/MS 10 0 1 1 4510500 4510500 0 1415 1070 1465 3465 2911 2911 1 243100 0 ASAVSPANLPAVLLQPR ______________________________ AVSPANLPAVLLQPRWKRVVGWSGPVPRPR M A S P R W 4 1 1 0 0 1 0 0 0 0 3 0 0 0 3 2 0 0 0 2 0 0 17 0 1702.973 P51610 P51610 2 18 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 2 0.0022113 110.29 By MS/MS 4 0 1 1 155760 155760 0 1416 1000 1466 3466 2912;2913 2913 2 14658 0 ASDEVPLAPR CFPLVKACVFGNEPKASDEVPLAPRTEAAE GNEPKASDEVPLAPRTEAAETTPMWQALKL K A S P R T 2 1 0 1 0 0 1 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1053.5455 Q8TB61 Q8TB61 88 97 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.0026516 110.87 By MS/MS 2 0.816 1 1 1 3 713510 713510 0 1417 1981 1467 3467;3468;3469 2914 2914 1 157210 0 ASDLTDAFVEVK KVKIVAGRHLPVMDRASDLTDAFVEVKFGN MDRASDLTDAFVEVKFGNTTFKTDVYLKSL R A S V K F 2 0 0 2 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 0 0 12 0 1293.6452 Q86YS7 Q86YS7 21 32 C2CD5 C2 domain-containing protein 5 yes yes 2 5.1148E-05 167.09 By MS/MS 3 0 1 1 114210 114210 0 1418 1855 1468 3470 2915 2915 1 2089.6 0 ASDNLVK EAMKRLQAAGNAVKRASDNLVKAAQKAAAF AAGNAVKRASDNLVKAAQKAAAFEEQENET R A S V K A 1 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 745.39702 Q9Y490 Q9Y490 2466 2472 TLN1 Talin-1 yes yes 2 0.016725 117.93 By MS/MS 2 0 1 1 445040 445040 0 1419 2888 1469 3471 2916 2916 1 150530 0 ASEAKEGEEAGPGDPLLEAVPK MQRCIDSGLWVPNSKASEAKEGEEAGPGDP EEAGPGDPLLEAVPKTGDEKDVSV______ K A S P K T 4 0 0 1 0 0 5 3 0 0 2 2 0 0 3 1 0 0 0 1 0 0 22 1 2193.0801 Q16543 Q16543 348 369 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 3 9.7402E-06 115.85 By MS/MS 6 0 1 1 2813300 2813300 0 1420 1551 1470 3472 2917 2917 1 19339 0 ASEAVLWEALR LLLVILGVIFMNGNRASEAVLWEALRKMGL NGNRASEAVLWEALRKMGLRPGVRHPLLGD R A S L R K 3 1 0 0 0 0 2 0 0 0 2 0 0 0 0 1 0 1 0 1 0 0 11 0 1243.6561 Q9Y5V3;Q96JG8 Q9Y5V3 577 587 MAGED1;MAGED4 Melanoma-associated antigen D1;Melanoma-associated antigen D4 yes no 2 0.00027042 136.96 By MS/MS 4 0 1 1 187660 187660 0 1421 2924 1471 3473 2918 2918 1 17660 0 ASEDIAKLAETLAK ______________________________ MASEDIAKLAETLAKTQVAGGQLSFKGKSL M A S A K T 4 0 0 1 0 0 2 0 0 1 2 2 0 0 0 1 1 0 0 0 0 0 14 1 1458.793 P46060 P46060 2 15 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 1.9546E-07 215.72 By MS/MS 6 1.41 1 1 1 1 1 5 4966300 4966300 0 1422 908 1472 3474;3475;3476;3477;3478 2919;2920;2921;2922;2923;2924;2925 2920 7 62974 0 ASEEHLK FEQKGFRLVAMKFLRASEEHLKQHYIDLKD LVAMKFLRASEEHLKQHYIDLKDRPFFPGL R A S L K Q 1 0 0 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 7 0 812.40283 P22392 P22392 43 49 NME2 Nucleoside diphosphate kinase B yes yes 2 0.0014313 173.85 By MS/MS 10 0 1 1 1372200 1372200 0 1423 692 1473 3479 2926 2926 1 73954 0 ASEELQKDLEEVK ______________________________ ______________________________ M A S V K V 1 0 0 1 0 1 4 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 13 1 1516.7621 Q9HB71 Q9HB71 2 14 CACYBP Calcyclin-binding protein yes yes 2 2.5663E-12 246.08 By MS/MS 8 0 1 1 3404500 3404500 0 1424 2501 1474 3480 2927 2927 1 42982 0 ASEGPAFFPGR LDVPPGEDKGGYVIKASEGPAFFPGRCAEI YVIKASEGPAFFPGRCAEIFARGQSVGKLG K A S G R C 2 1 0 0 0 0 1 2 0 0 0 0 0 2 2 1 0 0 0 0 0 0 11 0 1134.5458 Q9NSD9 Q9NSD9 537 547 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 8.4479E-05 153.24 By MS/MS 5 0 1 1 1695800 1695800 0 1425 2569 1475 3481 2928 2928 1 17008 0 ASELEPEVQAIDR ______________________________ ______________________________ M A S D R S 2 1 0 1 0 1 3 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 13 0 1455.7205 Q8IWV8 Q8IWV8 2 14 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 2 0.015571 88.338 By MS/MS 2 0 1 1 97831 97831 0 1426 1870 1476 3482 2929 2929 1 33090 0 ASELKEEIK KEALENCITLQDFNRASELKEEIKALEDAR LQDFNRASELKEEIKALEDARINLLKETEQ R A S I K A 1 0 0 0 0 0 3 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1045.5655 Q9BPX3 Q9BPX3 518 526 NCAPG Condensin complex subunit 3 yes yes 2 0.0082255 107.69 By MS/MS 3.5 0.5 1 1 2 1088700 1088700 0 1427 2279 1477 3483;3484 2930;2931 2931 2 59008 0 ASELLLPAAASLR SFIALSHKLGLPPGKASELLLPAAASLRQD GKASELLLPAAASLRQDLLLLQDQRSLWCW K A S L R Q 4 1 0 0 0 0 1 0 0 0 4 0 0 0 1 2 0 0 0 0 0 0 13 0 1310.7558 O94927 O94927 507 519 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.00099604 126.19 By MS/MS 5 0 1 1 815890 815890 0 1428 377 1478 3485 2932 2932 1 8183 0 ASELNPESIYSVFK LSRGGYTTALKSFTKASELNPESIYSVFKV KASELNPESIYSVFKVAAIQQILGKYKEAV K A S F K V 1 0 1 0 0 0 2 0 0 1 1 1 0 1 1 3 0 0 1 1 0 0 14 0 1582.7879 Q6PGP7 Q6PGP7 624 637 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.0010336 124.6 By MS/MS 4 0 1 1 86122 86122 0 1429 1716 1479 3486 2933 2933 1 8104.6 0 ASENNENKKETDEVSNTK SNSPKENNSEDQGSKASENNENKKETDEVS NNENKKETDEVSNTKSSSQIPAQPSVAKVP K A S T K S 1 0 4 1 0 0 4 0 0 0 0 3 0 0 0 2 2 0 0 1 0 0 18 2 2035.9294 Q9Y520 Q9Y520 357 374 PRRC2C Protein PRRC2C yes yes 3 0.00031864 125.96 By MS/MS 2 0 1 1 398710 398710 0 1430 2905 1480 3487 2934 2934 1 134860 0 ASETDALR AQLGSWGKGSSGGAKASETDALRSSASSLN GSSGGAKASETDALRSSASSLNRFSALQPP K A S L R S 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 8 0 861.41921 O43432 O43432 1085 1092 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0060873 120.46 By MS/MS 2 0 1 1 651230 651230 0 1431 210 1481 3488 2935 2935 1 220270 0 ASEVMGPVEAAPEYR EIMMKIEEYISKQAKASEVMGPVEAAPEYR ASEVMGPVEAAPEYRVIVDANNLTVEIENE K A S Y R V 3 1 0 0 0 0 3 1 0 0 0 0 1 0 2 1 0 0 1 2 0 0 15 0 1604.7505 Q8WWY3 Q8WWY3 77 91 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 5.8073E-05 143.97 By MS/MS 6 0 1 1 76781 0 76781 1432 2037 1482 3489 2936 2936 983 1 0 78679 ASFITANGVSLLK VAVEALIHAAGKAKRASFITANGVSLLKDL KRASFITANGVSLLKDLYKCSEKDSIRIRA R A S L K D 2 0 1 0 0 0 0 1 0 1 2 1 0 1 0 2 1 0 0 1 0 0 13 0 1319.7449 Q9H3U1 Q9H3U1 471 483 UNC45A Protein unc-45 homolog A yes yes 2 1.8525E-05 190.26 By MS/MS 4 0 1 1 303320 303320 0 1433 2442 1483 3490 2937 2937 1 28544 0 ASFVQTR NFVETEQIVHYNGSKASFVQTRGSIPVFWS IVHYNGSKASFVQTRGSIPVFWSQRPNLKY K A S T R G 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 7 0 807.4239 Q9NTJ5 Q9NTJ5 251 257 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.015692 120.62 By MS/MS 1.5 0.5 1 1 2 666880 666880 0 1434 2576 1484 3491;3492 2938;2939 2938 2 189460 0 ASFVTEVLAHSGR ______________________________ ______________________________ M A S G R L 2 1 0 0 0 0 1 1 1 0 1 0 0 1 0 2 1 0 0 2 0 0 13 0 1372.7099 O43264 O43264 2 14 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 1.9415E-07 181.4 By MS/MS 5 1 1 1 2 491930 491930 0 1435 200 1485 3493;3494 2940;2941;2942;2943 2941 4 39600 0 ASFWLGELQR VQALYHDPDPSGKERASFWLGELQRSVHAW SGKERASFWLGELQRSVHAWEISDQLLQIR R A S Q R S 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 10 0 1205.6193 Q9Y5L0 Q9Y5L0 30 39 TNPO3 Transportin-3 yes yes 2 3.9031E-05 158.07 By MS/MS 4 0 1 1 263340 263340 0 1436 2915 1486 3495 2944 2944 1 24782 0 ASGADSKGDDLSTAILK ______________________________ GADSKGDDLSTAILKQKNRPNRLIVDEAIN M A S L K Q 3 0 0 3 0 0 0 2 0 1 2 2 0 0 0 3 1 0 0 0 0 0 17 1 1647.8315 P55072 P55072 2 18 VCP Transitional endoplasmic reticulum ATPase yes yes 2;3 2.0766E-24 269.88 By MS/MS By MS/MS 5.23 2.58 1 1 1 3 2 1 1 1 1 1 12 1 53902000 53771000 131190 1437 1054 1487 3496;3497;3498;3499;3500;3501;3502;3503;3504;3505;3506;3507;3508 2945;2946;2947;2948;2949;2950;2951;2952;2953;2954;2955;2956 2953 12 3853000 279530 ASGADSKGDDLSTAILKQK ______________________________ DSKGDDLSTAILKQKNRPNRLIVDEAINED M A S Q K N 3 0 0 3 0 1 0 2 0 1 2 3 0 0 0 3 1 0 0 0 0 0 19 2 1903.9851 P55072 P55072 2 20 VCP Transitional endoplasmic reticulum ATPase yes yes 3 6.97E-07 202.35 By MS/MS By matching 4 0 2 1 1 2621800 2589500 32307 1438 1054 1488 3509;3510 2957 2957 1 243690 68837 ASGAQLEAK LLILYALLSRLTGSRASGAQLEAKVRGLER RLTGSRASGAQLEAKVRGLERQVEELRWRQ R A S A K V 3 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 873.4556 Q9BVC6 Q9BVC6 207 215 TMEM109 Transmembrane protein 109 yes yes 2 0.00047726 147.4 By MS/MS 9 0 1 1 3092900 3092900 0 1439 2332 1489 3511 2958 2958 1 60869 0 ASGCEGEDVVTLLK SLDESILLKWTKGFKASGCEGEDVVTLLKE KASGCEGEDVVTLLKEAIHRREEFDLDVVA K A S L K E 1 0 0 1 1 0 2 2 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1476.713 P52789 P52789 625 638 HK2 Hexokinase-2 yes yes 2 1.3279E-05 176.78 By MS/MS 5 0.816 1 1 1 3 6240100 6240100 0 1440 1023 1490 3512;3513;3514 2959 2959 1 448550 0 ASGDSARPVLLQVAESAYR EGTLPFNLAEAQRQKASGDSARPVLLQVAE SARPVLLQVAESAYRFGLGSVAGAVGATAV K A S Y R F 4 2 0 1 0 1 1 1 0 0 2 0 0 0 1 3 0 0 1 2 0 0 19 1 1989.028 Q9UJS0 Q9UJS0 313 331 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 5.6011E-05 145.8 By MS/MS 6.12 1.05 3 2 2 1 8 25230000 25230000 0 1441 2748 1491 3515;3516;3517;3518;3519;3520;3521;3522 2960;2961;2962;2963;2964;2965;2966 2965 7 248040 0 ASGEHSPGSGAAR ______________________________ ______________________________ M A S A R R 3 1 0 0 0 0 1 3 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1182.5378 Q9H4A4 Q9H4A4 2 14 RNPEP Aminopeptidase B yes yes 2 0.0008131 131.12 By MS/MS 5 0 1 1 496350 496350 0 1442 2444 1492 3523 2967 2967 1 4978.2 0 ASGGSGGVSVPALWSEVNR ______________________________ SGGVSVPALWSEVNRYGQNGDFTRALKTVN M A S N R Y 2 1 1 0 0 0 1 4 0 0 1 0 0 0 1 4 0 1 0 3 0 0 19 0 1828.9068 O76094 O76094 2 20 SRP72 Signal recognition particle subunit SRP72 yes yes 2 6.6443E-05 200.82 By MS/MS 5 0 1 1 200550 200550 0 1443 362 1493 3524 2968;2969 2968 2 2011.4 0 ASGNTLVR SPGVGKTSLVGALAKASGNTLVRINLSEQT LVGALAKASGNTLVRINLSEQTDITDLFGA K A S V R I 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 816.44537 Q9NU22 Q9NU22 1769 1776 MDN1 Midasin yes yes 2 0.0085009 112.41 By MS/MS 1.5 0.5 1 1 2 400000 400000 0 1444 2580 1494 3525;3526 2970 2970 1 114620 0 ASGNYATVISHNPETK CCLEEKPGDRGKLARASGNYATVISHNPET SGNYATVISHNPETKKTRVKLPSGSKKVIS R A S T K K 2 0 2 0 0 0 1 1 1 1 0 1 0 0 1 2 2 0 1 1 0 0 16 0 1687.8166 P62917 P62917 129 144 RPL8 60S ribosomal protein L8 yes yes 2 5.9015E-11 245.5 By MS/MS By matching 8.33 0.471 2 1 2 1 1389100 1361600 27549 1445 1187 1495 3527;3528;3529 2971 2971 1 17740 37176 ASGNYATVISHNPETKK CCLEEKPGDRGKLARASGNYATVISHNPET GNYATVISHNPETKKTRVKLPSGSKKVISS R A S K K T 2 0 2 0 0 0 1 1 1 1 0 2 0 0 1 2 2 0 1 1 0 0 17 1 1815.9115 P62917 P62917 129 145 RPL8 60S ribosomal protein L8 yes yes 3;4 0.00088724 112.62 By MS/MS 8 0 2 2 2727400 2727400 0 1446 1187 1496 3530;3531 2972;2973 2972 2 34433 0 ASGPPVSELITK VKKKAAKKAGGTPRKASGPPVSELITKAVA PRKASGPPVSELITKAVAASKERSGVSLAA K A S T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1197.6605 P10412;P16402;P16403 P16403 35 46 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 2 0.008116 94.465 By MS/MS By MS/MS 7 0.707 1 2 1 2 2 5188800 5065700 123050 1447 560;633 1497 3532;3533;3534;3535 2974;2975;2976 2976 3 70146 155080 ASGQAFELILSPR ______________________________ KRASGQAFELILSPRSKESVPEFPLSPPKK R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 P16949 P16949 15 27 STMN1 Stathmin yes yes 2 0.00040319 161.93 By MS/MS 9.5 0.5 1 1 2 538180 538180 0 1448 636 1498 3536;3537 2977;2978;2979 2978 3 13843 0 ASGQNLNLR VGKGGSGGWKAQVVKASGQNLNLRVHTSPN KAQVVKASGQNLNLRVHTSPNAIIGKFQFT K A S L R V 1 1 2 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 971.51484 P22735 P22735 200 208 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 2 0.0016391 136.27 By MS/MS 5.67 3.09 1 1 1 3 158890 0 158890 1449 697 1499 3538;3539;3540 2980;2981 2980 2 0 86673 ASGQSFEVILK VYQYGDMEVKQLDKRASGQSFEVILKSPSD LDKRASGQSFEVILKSPSDLSPESPMLSSP R A S L K S 1 0 0 0 0 1 1 1 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1177.6343 Q9NZ72 Q9NZ72 49 59 STMN3 Stathmin-3 yes yes 2 0.00079461 125.68 By MS/MS 9 0 1 1 175910 175910 0 1450 2646 1500 3541 2982 2982 1 3461.9 0 ASGTVYSGEEKLTELLVK LKEYSSMDAFWQEGRASGTVYSGEEKLTEL TVYSGEEKLTELLVKAYGDFAWSNPLHPDI R A S V K A 1 0 0 0 0 0 3 2 0 0 3 2 0 0 0 2 2 0 1 2 0 0 18 1 1923.0201 O95470 O95470 145 162 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.00092958 141.59 By MS/MS 6 0 1 1 2477700 2477700 0 1451 413 1501 3542 2983 2983 1 17032 0 ASGVAVSDGVIK ______________________________ ______________________________ M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 P23528 P23528 2 13 CFL1 Cofilin-1 yes yes 2 2.6797E-05 175.65 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 4942700 4886200 56467 1452 707 1502 3543;3544;3545 2984;2985;2986 2985 3 152620 128760 ASGVAVSDGVIKVFNDMK ______________________________ VAVSDGVIKVFNDMKVRKSSTPEEVKKRKK M A S M K V 2 0 1 2 0 0 0 2 0 1 0 2 1 1 0 2 0 0 0 4 0 0 18 1 1835.9451 P23528 P23528 2 19 CFL1 Cofilin-1 yes yes 2 0.00012437 147.39 By MS/MS 9.5 0.5 1 1 2 264480 264480 0 1453 707 1503 3546;3547 2987;2988 2988 351 2 8859.4 0 ASGVEGADVVK KIDEAILITWTKRFKASGVEGADVVKLLNK KRFKASGVEGADVVKLLNKAIKKRGDYDAN K A S V K L 2 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 11 0 1030.5295 P19367 P19367 177 187 HK1 Hexokinase-1 yes yes 2 0.0032906 108.43 By MS/MS 4 0 1 1 1029900 1029900 0 1454 660 1504 3548 2989 2989 1 96923 0 ASGVQVADEVCR ______________________________ ______________________________ M A S C R I 2 1 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1289.6034 P60981 P60981 2 13 DSTN Destrin yes yes 2 2.2741E-05 176.78 By MS/MS 10 0 1 1 825000 825000 0 1455 1101 1505 3549 2990 2990 1 44464 0 ASHFQSHSSER SGYGQSTQTGSRSSRASHFQSHSSERQRHG RSSRASHFQSHSSERQRHGSSQVWKHGSYG R A S E R Q 1 1 0 0 0 1 1 0 2 0 0 0 0 1 0 4 0 0 0 0 0 0 11 0 1271.5643 CON__Q5D862;Q5D862 CON__Q5D862 2325 2335 FLG2 Filaggrin-2 yes no 2;3 5.4247E-09 184.71 By matching By MS/MS 5.45 2.85 2 2 2 2 2 3 1 2 2 2 1 19 2030000 173650 1856300 + 1456 67 1506 3550;3551;3552;3553;3554;3555;3556;3557;3558;3559;3560;3561;3562;3563;3564;3565;3566;3567;3568;3569 2991;2992;2993;2994;2995;2996;2997;2998;2999;3000;3001 2993 11 1193.7 964480 ASILDEYENSLSR ______________________________ ______________________________ M A S S R S 1 1 1 1 0 0 2 0 0 1 2 0 0 0 0 3 0 0 1 0 0 0 13 0 1495.7155 Q9P253 Q9P253 2 14 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 4.2392E-17 260.6 By MS/MS 5 1 1 1 2 672750 672750 0 1457 2677 1507 3570;3571 3002;3003;3004;3005;3006 3003 5 50539 0 ASIPFSVVGSNQLIEAK SDEDEDFKEQTRLLKASIPFSVVGSNQLIE IPFSVVGSNQLIEAKGKKVRGRLYPWGVVE K A S A K G 2 0 1 0 0 1 1 1 0 2 1 1 0 1 1 3 0 0 0 2 0 0 17 0 1758.9516 Q15019 Q15019 233 249 SEPT2 Septin-2 yes yes 2 2.6251E-11 241.84 By MS/MS 7 0 1 1 1558400 1558400 0 1458 1472 1508 3572 3007 3007 1 24463 0 ASISEPSDTDPEPR QPLLHKVKSRVRVRRASISEPSDTDPEPRT RASISEPSDTDPEPRTLNPSPAGWFVQQHP R A S P R T 1 1 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 14 0 1499.674 Q8N1F8 Q8N1F8 386 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.00079573 128.88 By MS/MS 3.5 0.5 1 1 2 517610 517610 0 1459 1904 1509 3573;3574 3008;3009 3009 2 30622 0 ASISQGPPTASR VAMAIAGGPLAPGSRASISQGPPTASRAGC GSRASISQGPPTASRAGCALSAESSRTLLA R A S S R A 2 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1170.5993 Q96HP0 Q96HP0 1229 1240 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 5.1062E-05 167.12 By MS/MS 3 0.816 1 1 1 3 1803700 1803700 0 1460 2166 1510 3575;3576;3577 3010 3010 1 372560 0 ASKELVER YSKIFEQKDRLSQSKASKELVERRRTMMED DRLSQSKASKELVERRRTMMEDFRKYRKMA K A S E R R 1 1 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 8 1 930.51345 P55884 P55884 742 749 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.036627 95.502 By MS/MS 4 0 1 1 670980 670980 0 1461 1065 1511 3578 3011 3011 1 63144 0 ASKEMFEDTVEER ______________________________ ______________________________ M A S E R V 1 1 0 1 0 0 4 0 0 0 0 1 1 1 0 1 1 0 0 1 0 0 13 1 1569.6981 Q16576 Q16576 2 14 RBBP7 Histone-binding protein RBBP7 yes yes 2 1.4581E-07 206.74 By MS/MS 6 0 1 1 10366000 10366000 0 1462 1553 1512 3579 3012 3012 1 71257 0 ASLACGPMVK NYMSNPSYNYEIVNRASLACGPMVKWAIAQ EIVNRASLACGPMVKWAIAQLNYADMLKRV R A S V K W 2 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 1 0 0 10 0 1032.5096 Q14204 Q14204 3385 3394 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0086232 97.431 By MS/MS By matching 1.33 0.471 2 1 2 1 613110 537990 75119 1463 1433 1513 3580;3581;3582 3013;3014 3014 2 166700 75119 ASLCISTK MIEKLGGKLTGTANKASLCISTKKEVEKMN LTGTANKASLCISTKKEVEKMNKKMEEVKE K A S T K K 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 8 0 878.45315 P09874 P09874 426 433 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0071584 115.49 By MS/MS 3.5 0.5 1 1 2 2164700 2164700 0 1464 543 1514 3583;3584 3015;3016 3016 2 163230 0 ASLDRVK ______________________________ ______________________________ M A S V K V 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 1 787.4552 Q5HYI8 Q5HYI8 2 8 RABL3 Rab-like protein 3 yes yes 2 0.024776 108.09 By MS/MS 7.5 0.5 1 1 2 3240100 3240100 0 1465 1601 1515 3585;3586 3017 3017 1 41134 0 ASLEDAPVDDLTR AERSCTPSPDQISHRASLEDAPVDDLTRKF HRASLEDAPVDDLTRKFTYLGSQDRARPPS R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 Q7Z2W4 Q7Z2W4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 2.6441E-12 246.08 By MS/MS 3 1.41 1 1 1 1 1 5 19535000 19535000 0 1466 1778 1516 3587;3588;3589;3590;3591 3018;3019;3020;3021 3020 4 1578700 0 ASLENSLEETK MQNLEIELQSQLSMKASLENSLEETKGRYC LSMKASLENSLEETKGRYCMQLAQIQEMIG K A S T K G 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 11 0 1219.5932 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 353 363 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 1.4302E-13 242.97 By MS/MS By MS/MS 4.4 1.36 2 1 2 3 2 6217600 3434700 2782800 + 1467 39;47 1517 3592;3593;3594;3595;3596 3022;3023;3024;3025 3025 4 243320 515710 ASLENSLEETKGR MQNLEIELQSQLSMKASLENSLEETKGRYC MKASLENSLEETKGRYCMQLAQIQEMIGSV K A S G R Y 1 1 1 0 0 0 3 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1432.7158 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 353 365 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 1.0946E-05 182.92 By MS/MS 5.12 2.93 1 1 1 1 1 1 1 1 8 2485300 0 2485300 + 1468 39;47 1518 3597;3598;3599;3600;3601;3602;3603;3604 3026;3027;3028 3026 3 0 1025400 ASLEVSRSPR ______________________________ ______________________________ M A S P R R 1 2 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 1 1100.5938 O60762 O60762 2 11 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.074298 61.691 By MS/MS 8 0 1 1 0 0 0 1469 275 1519 3605 3029 3029 1 0 0 ASLLDPVPEVR KDLAPYLPSVTPGLKASLLDPVPEVRTVSA PGLKASLLDPVPEVRTVSAKALGAMVKGMG K A S V R T 1 1 0 1 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6608 Q92616 Q92616 1664 1674 GCN1L1 Translational activator GCN1 yes yes 2 0.0011443 118.71 By MS/MS 2.5 1.12 1 1 1 1 4 6337300 6337300 0 1470 2064 1520 3606;3607;3608;3609 3030;3031;3032 3031 3 1696600 0 ASLLDSNVLVQR YMLGTNHQLTVKSLRASLLDSNVLVQRNNL SLRASLLDSNVLVQRNNLEIVLFFFPFYTC R A S Q R N 1 1 1 1 0 1 0 0 0 0 3 0 0 0 0 2 0 0 0 2 0 0 12 0 1313.7303 Q9Y3R5 Q9Y3R5 233 244 DOPEY2 Protein dopey-2 yes yes 2 1.6538E-12 233.09 By MS/MS 2 0 1 1 308610 308610 0 1471 2883 1521 3610 3033 3033 1 104380 0 ASLLKVDQEVK ______________________________ ______________________________ M A S V K L 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 11 1 1228.7027 P61289 P61289 2 12 PSME3 Proteasome activator complex subunit 3 yes yes 2 3.1466E-07 199.33 By MS/MS 7.5 0.5 1 1 2 8479500 8479500 0 1472 1120 1522 3611;3612 3034 3034 1 107360 0 ASLNPSDTPPSVVNEDFLHDLK QNTLGVNVEHKTTSKASLNPSDTPPSVVNE TPPSVVNEDFLHDLKETNISYSQEADDRVF K A S L K E 1 0 2 3 0 0 1 0 1 0 3 1 0 1 3 3 1 0 0 2 0 0 22 0 2394.1703 O00116 O00116 148 169 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 1.8953E-05 113.23 By MS/MS 5 0 1 1 742450 742450 0 1473 80 1523 3613 3035 3035 1 7446.4 0 ASLPGVK ALRWYNHIKSYEKEKASLPGVKKALGKYGP IKSYEKEKASLPGVKKALGKYGPADVEDTT K A S V K K 1 0 0 0 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 7 0 670.40138 P24534 P24534 67 73 EEF1B2 Elongation factor 1-beta yes yes 2 0.037091 99.384 By MS/MS 8 0 1 1 1290200 1290200 0 1474 713 1524 3614 3036 3036 1 16288 0 ASLSLAPVNIFK ______________________________ ______________________________ M A S F K A 2 0 1 0 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 1 0 0 12 0 1258.7285 P78371 P78371 2 13 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00030236 145.99 By MS/MS By MS/MS 6.36 1.49 1 1 6 1 1 1 10 1 47152000 47059000 92540 1475 1222 1525 3615;3616;3617;3618;3619;3620;3621;3622;3623;3624;3625 3037;3038;3039;3040;3041;3042;3043;3044;3045;3046;3047;3048;3049;3050;3051;3052;3053;3054 3049 18 356170 94827 ASLSLAPVNIFKAGADEER ______________________________ LAPVNIFKAGADEERAETARLTSFIGAIAI M A S E R A 4 1 1 1 0 0 2 1 0 1 2 1 0 1 1 2 0 0 0 1 0 0 19 1 1987.0375 P78371 P78371 2 20 CCT2 T-complex protein 1 subunit beta yes yes 2 1.4438E-05 196.18 By MS/MS 6 0 1 1 2385700 2385700 0 1476 1222 1526 3626 3055 3055 1 16400 0 ASLSLAPVNIFKAGADEERAETAR ______________________________ IFKAGADEERAETARLTSFIGAIAIGDLVK M A S A R L 6 2 1 1 0 0 3 1 0 1 2 1 0 1 1 2 1 0 0 1 0 0 24 2 2515.3031 P78371 P78371 2 25 CCT2 T-complex protein 1 subunit beta yes yes 3 0.00070778 83.948 By MS/MS 6 0 1 1 6349600 6349600 0 1477 1222 1527 3627 3056 3056 1 43649 0 ASLSLIEK KIEALQNHENESVYKASLSLIEKYFSVEEE ENESVYKASLSLIEKYFSVEEEEDQNVVPE K A S E K Y 1 0 0 0 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 8 0 859.50148 P52292 P52292 487 494 KPNA2 Importin subunit alpha-1 yes yes 2 9.5572E-05 176.09 By MS/MS 6.5 0.5 1 1 2 3889000 3889000 0 1478 1013 1528 3628;3629 3057 3057 1 30361 0 ASLTLSR GHTVDWRSPAGARLRASLTLSREAQKFALA SPAGARLRASLTLSREAQKFALAREVVYLE R A S S R E 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 1 0 0 0 0 0 7 0 746.42865 Q53S58 Q53S58 141 147 TMEM177 Transmembrane protein 177 yes yes 2 0.032587 102.77 By MS/MS 8 0 1 1 624050 624050 0 1479 1592 1529 3630 3058 3058 1 7878.6 0 ASLTYAEAQLR EILKTKFTKSVINSKASLTYAEAQLRIDSA INSKASLTYAEAQLRIDSANMNDDITTSLR K A S L R I 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 11 0 1221.6354 Q9Y2L1 Q9Y2L1 586 596 DIS3 Exosome complex exonuclease RRP44 yes yes 2 1.3962E-06 185.81 By MS/MS 3.5 0.5 1 1 2 4763600 4763600 0 1480 2834 1530 3631;3632 3059 3059 1 438420 0 ASNGDAWVEAHGK EVQKDIKNVPFKIVRASNGDAWVEAHGKLY VRASNGDAWVEAHGKLYSPSQIGAFVLMKM R A S G K L 3 0 1 1 0 0 1 2 1 0 0 1 0 0 0 1 0 1 0 1 0 0 13 0 1340.6109 P38646 P38646 147 159 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.8966E-05 176.87 By MS/MS 5 0 1 1 2829200 2829200 0 1481 850 1531 3633 3060 3060 1 28375 0 ASNLENSTYDLYTIPK MSYNPAENAVLLCTRASNLENSTYDLYTIP SNLENSTYDLYTIPKDADSQNPDAPEGKRS R A S P K D 1 0 2 1 0 0 1 0 0 1 2 1 0 0 1 2 2 0 2 0 0 0 16 0 1827.8891 P53621 P53621 383 398 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 6.4662E-24 301.38 By MS/MS By matching 3 1.41 1 1 1 1 1 4 1 2583200 2522200 60918 1482 1034 1532 3634;3635;3636;3637;3638 3061;3062;3063;3064;3065 3064 5 395450 7753.9 ASNLLYGQLK PWCPPCRALLPELRRASNLLYGQLKFGTLD PELRRASNLLYGQLKFGTLDCTVHEGLCNM R A S L K F 1 0 1 0 0 1 0 1 0 0 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1105.6132 Q8IXB1 Q8IXB1 493 502 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.00026107 142.98 By MS/MS By matching 4 0.816 1 1 1 2 1 2092100 1931300 160800 1483 1874 1533 3639;3640;3641 3066;3067 3067 2 66457 20467 ASNLQDLVYK SICFLLGISNLSQVRASNLQDLVYKNGQAG LSQVRASNLQDLVYKNGQAGITKASVSITF R A S Y K N 1 0 1 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1149.603 O95347 O95347 59 68 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0003562 136.52 By MS/MS 3 0 1 1 1356400 1356400 0 1484 405 1534 3642 3068 3068 1 24819 0 ASNPERGEILLTELQGDSR ______________________________ ERGEILLTELQGDSRSLPFSENVSAVQKLD M A S S R S 1 2 1 1 0 1 3 2 0 1 3 0 0 0 1 2 1 0 0 0 0 0 19 1 2084.0498 Q16513 Q16513 2 20 PKN2 Serine/threonine-protein kinase N2 yes yes 2;3 1.6496E-05 137.27 By MS/MS 3 0 2 2 364710 364710 0 1485 1547 1535 3643;3644 3069;3070;3071;3072 3069 4 6673.3 0 ASNTADTLFQEVLGR VEGSMTQKLENVLNRASNTADTLFQEVLGR ASNTADTLFQEVLGRKDKADSTRNALNVLQ R A S G R K 2 1 1 1 0 1 1 1 0 0 2 0 0 1 0 1 2 0 0 1 0 0 15 0 1620.8107 Q96KP1 Q96KP1 249 263 EXOC2 Exocyst complex component 2 yes yes 2 4.5681E-07 234.49 By MS/MS 4 0 1 1 137180 137180 0 1486 2189 1536 3645 3073 3073 1 12909 0 ASNTAEVFFDGVR GGITHGPPEKKMGIKASNTAEVFFDGVRVP IKASNTAEVFFDGVRVPSENVLGEVGSGFK K A S V R V 2 1 1 1 0 0 1 1 0 0 0 0 0 2 0 1 1 0 0 2 0 0 13 0 1411.6732 P49748 P49748 304 316 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 9.4387E-08 213.84 By MS/MS 5 0 1 1 488360 488360 0 1487 959 1537 3646 3074 3074 1 4898 0 ASNVTNKTDPR ______________________________ ______________________________ M A S P R S 1 1 2 1 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 11 1 1201.6051 P07910 P07910 2 12 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 0.019107 85.807 By MS/MS By MS/MS 7 0 2 1 1 11433000 11149000 283460 1488 514 1538 3647;3648 3075;3076 3076 2 175020 510500 ASNYEKELK ARRSLEKEKNSLMNKASNYEKELKFLRQEN NSLMNKASNYEKELKFLRQENRKNMLLSVA K A S L K F 1 0 1 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 9 1 1080.5451 Q9P0B6 Q9P0B6 60 68 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 0.0079361 126.31 By MS/MS 10 0 1 1 244330 244330 0 1489 2662 1539 3649 3077 3077 1 13168 0 ASPAAPADGAAPAQPSIR VRRLQEKTEQEAAQRASPAAPADGAAPAQP AAPADGAAPAQPSIRYRKDRVVARRAPCFP R A S I R Y 7 1 0 1 0 1 0 1 0 1 0 0 0 0 4 2 0 0 0 0 0 0 18 0 1646.8376 Q9P1Y5 Q9P1Y5 192 209 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 1.5212E-07 219.84 By MS/MS 3 0 1 1 448760 448760 0 1490 2673 1540 3650 3078;3079 3079 2 8211.1 0 ASPLVAIGQTLAR ERTRFQELLASPAYRASPLVAIGQTLARQM YRASPLVAIGQTLARQMQLEDGGQL_____ R A S A R Q 3 1 0 0 0 1 0 1 0 1 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1295.7561 Q9NSI2 Q9NSI2 208 220 FAM207A Protein FAM207A yes yes 2 0.00032892 149.33 By MS/MS 8 0 1 1 213490 213490 0 1491 2571 1541 3651 3080 3080 1 2695.3 0 ASPNTPPGRVDENGPELLPR MAQILQILTVQAQLRASPNTPPGRVDENGP PPGRVDENGPELLPRVAMLRLLTWVIGTGS R A S P R V 1 2 2 1 0 0 2 2 0 0 2 0 0 0 5 1 1 0 0 1 0 0 20 1 2115.0709 Q92616 Q92616 1018 1037 GCN1L1 Translational activator GCN1 yes yes 3 2.5034E-05 119.04 By MS/MS 2.5 0.5 1 1 2 816570 816570 0 1492 2064 1542 3652;3653 3081;3082 3081 2 202500 0 ASQEADNVLILQDR DDKELQTASIFGSAKASQEADNVLILQDRK KASQEADNVLILQDRKLVTGPGKRYLQVSK K A S D R K 2 1 1 2 0 2 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 14 0 1570.7951 Q96RR1 Q96RR1 579 592 PEO1 Twinkle protein, mitochondrial yes yes 2 9.0513E-24 274.8 By MS/MS By MS/MS 5 0 2 1 1 3953800 3869400 84429 1493 2225 1543 3654;3655 3083;3084 3084 2 38808 70902 ASQNPGAAQPR NLRPSPNLRPSPNSRASQNPGAAQPRDVAL PNSRASQNPGAAQPRDVALLQERANKLVKY R A S P R D 3 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 11 0 1095.5421 Q9Y5V3 Q9Y5V3 456 466 MAGED1 Melanoma-associated antigen D1 yes yes 2 1.7636E-05 166.07 By MS/MS 4 0 1 1 1744700 1744700 0 1494 2924 1544 3656 3085 3085 1 164190 0 ASQNRDPAATSVAAAR ______________________________ SQNRDPAATSVAAARKGAEPSGGAARGPVG M A S A R K 6 2 1 1 0 1 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 0 16 1 1584.7968 O00762 O00762 2 17 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 2 0.00035429 154.23 By MS/MS 9 0.816 1 1 1 3 1457100 1457100 0 1495 120 1545 3657;3658;3659 3086;3087 3086 2 41259 0 ASQQQQTNSIR LSPTKLPSINKSKDRASQQQQTNSIRNYFQ SKDRASQQQQTNSIRNYFQPSTKKRERDEE R A S I R N 1 1 1 0 0 4 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 11 0 1259.6218 O60934 O60934 446 456 NBN Nibrin yes yes 2 1.5516E-06 183.85 By MS/MS 4 0 1 1 277300 277300 0 1496 287 1546 3660 3088 3088 1 26096 0 ASQSQGIQQLLQAEK ______________________________ ASQSQGIQQLLQAEKRAAEKVSEARKRKNR M A S E K R 2 0 0 0 0 5 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1627.8529 O75348;O95670 O75348 2 16 ATP6V1G1;ATP6V1G2 V-type proton ATPase subunit G 1;V-type proton ATPase subunit G 2 yes no 2 4.9987E-11 237.32 By MS/MS 10 0 1 1 318550 318550 0 1497 313 1547 3661 3089 3089 1 17169 0 ASQSQGIQQLLQAEKR ______________________________ SQSQGIQQLLQAEKRAAEKVSEARKRKNRR M A S K R A 2 1 0 0 0 5 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 16 1 1783.9541 O75348;O95670 O75348 2 17 ATP6V1G1;ATP6V1G2 V-type proton ATPase subunit G 1;V-type proton ATPase subunit G 2 yes no 2 1.78E-24 307.77 By MS/MS 10 0 1 1 671310 671310 0 1498 313 1548 3662 3090 3090 1 36181 0 ASQVECTGAR GLAYHGCPSECTCSRASQVECTGARIVAVP CTCSRASQVECTGARIVAVPTPLPWNAMSL R A S A R I 2 1 0 0 1 1 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1077.4873 Q8TF66 Q8TF66 34 43 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 1.0041E-05 169.93 By MS/MS 10 0 1 1 253910 0 253910 1499 2008 1549 3663 3091 3091 1 0 325080 ASREEILAQAKENEK QAQMKDCMRELDDTRASREEILAQAKENEK ASREEILAQAKENEKKLKSMEAEMIQLQEE R A S E K K 3 1 1 0 0 1 4 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 15 2 1714.885 P35579 P35579 1659 1673 MYH9 Myosin-9 yes yes 3 0.026337 76.574 By MS/MS By matching 2 0 2 1 1 854860 804410 50454 1500 824 1550 3664;3665 3092 3092 1 272080 71351 ASSAQSGGSSGGPAVPTVQR ______________________________ SGGSSGGPAVPTVQRGIIKMVLSGCAIIVR M A S Q R G 3 1 0 0 0 2 0 4 0 0 0 0 0 0 2 5 1 0 0 2 0 0 20 0 1799.8762 Q7KZF4 Q7KZF4 2 21 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 1.433E-05 176.4 By MS/MS By matching 4 0 2 1 1 3749700 3695800 53924 1501 1755 1551 3666;3667 3093 3093 1 347800 114890 ASSDLEQLCSHVNEK ______________________________ ASSDLEQLCSHVNEKIGNIKKTLSLRNCGQ M A S E K I 1 0 1 1 1 1 2 0 1 0 2 1 0 0 0 3 0 0 0 1 0 0 15 0 1715.7785 Q96BD8 Q96BD8 2 16 SKA1 Spindle and kinetochore-associated protein 1 yes yes 2 2.5996E-05 198.52 By MS/MS 8 0 1 1 1301700 1301700 0 1502 2111 1552 3668 3094 3094 1 16434 0 ASSEMALYQK IREAKLAGDHIEYYKASSEMALYQKKHGIK IEYYKASSEMALYQKKHGIKLYKPLILPVT K A S Q K K 2 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 0 10 0 1126.5329 Q15070 Q15070 198 207 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.038026 78.113 By MS/MS 7 0 1 1 1369200 1369200 0 1503 1487 1553 3669 3095 3095 1 21494 0 ASSGAGDPLDSK ______________________________ ______________________________ M A S S K R 2 0 0 2 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 12 0 1103.5095 Q9Y2R0 Q9Y2R0 2 13 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 0.009038 108.31 By MS/MS 10 0 1 1 1293000 1293000 0 1504 2839 1554 3670 3096 3096 1 69688 0 ASSGAGDPLDSKR ______________________________ ______________________________ M A S K R G 2 1 0 2 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 13 1 1259.6106 Q9Y2R0 Q9Y2R0 2 14 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 0.0047233 72.289 By MS/MS 10 0 1 1 0 0 0 1505 2839 1555 3671 3097 3097 1 0 0 ASSGAGDPLDSKRGEAPFAQR ______________________________ DPLDSKRGEAPFAQRIDPTREKLTPEQLHS M A S Q R I 4 2 0 2 0 1 1 3 0 0 1 1 0 1 2 3 0 0 0 0 0 0 21 2 2116.0297 Q9Y2R0 Q9Y2R0 2 22 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 3 0.020294 56.215 By MS/MS 10 0 1 1 2287100 2287100 0 1506 2839 1556 3672 3098 3098 1 123260 0 ASSGLLYPLER FQGHSGAQCITCSYKASSGLLYPLERGFIY CSYKASSGLLYPLERGFIYVHKPPVHIRFD K A S E R G 1 1 0 0 0 0 1 1 0 0 3 0 0 0 1 2 0 0 1 0 0 0 11 0 1204.6452 Q08945 Q08945 347 357 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.0004617 132.32 By MS/MS 5.12 2.71 1 1 1 1 1 1 1 1 8 5688500 5688500 0 1507 1313 1557 3673;3674;3675;3676;3677;3678;3679;3680 3099;3100 3100 2 106180 0 ASSLGEIDESSELR LDFDLEPEPPPAPPRASSLGEIDESSELRV RASSLGEIDESSELRVLDIPGQDSETVFDI R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.039749 73.9 By MS/MS 3.5 0.5 1 1 2 1068900 1068900 0 1508 1547 1558 3681;3682 3101 3101 0 44727 0 ASSLISLLK VIILSLDRSDEDKEKASSLISLLKQEGIAT DEDKEKASSLISLLKQEGIATSDNFMQAFL K A S L K Q 1 0 0 0 0 0 0 0 0 1 3 1 0 0 0 3 0 0 0 0 0 0 9 0 930.57498 P78344 P78344 600 608 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00066887 141.52 By MS/MS 4.5 0.5 1 1 2 3326800 3326800 0 1509 1219 1559 3683;3684 3102 3102 1 280120 0 ASSLLAGER ______________________________ ______________________________ M A S E R L 2 1 0 0 0 0 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 902.48214 Q8N511 Q8N511 2 10 TMEM199 Transmembrane protein 199 yes yes 2 0.0040961 111.61 By MS/MS 9 0 1 1 1167900 1167900 0 1510 1920 1560 3685 3103 3103 1 22984 0 ASSLNEDPEGSR ______________________________ ______________________________ M A S S R I 1 1 1 1 0 0 2 1 0 0 1 0 0 0 1 3 0 0 0 0 0 0 12 0 1260.5582 Q9Y530 Q9Y530 2 13 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 2 0.044152 60.691 By MS/MS 10 0 1 1 204550 204550 0 1511 2906 1561 3686 3104 3104 0 11025 0 ASSLNFLNK QGGTPQEPPNPRMKRASSLNFLNKSVEEPT NPRMKRASSLNFLNKSVEEPTQPGGTGLSD R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes yes 2 0.0012196 131.22 By MS/MS 5 0 1 1 712460 712460 0 1512 2405 1562 3687 3105 3105 1 7145.6 0 ASSSGSKAEFIVGGK ______________________________ ASSSGSKAEFIVGGKYKLVRKIGSGSFGDI M A S G K Y 2 0 0 0 0 0 1 3 0 1 0 2 0 1 0 4 0 0 0 1 0 0 15 1 1423.7307 P48729 P48729 2 16 CSNK1A1 Casein kinase I isoform alpha yes yes 2 0.0010168 122.46 By MS/MS 7.5 0.5 1 1 2 1671900 1671900 0 1513 941 1563 3688;3689 3106 3106 1 25272 0 ASSSLGLQDFDLLR VGEEKEAMNTRESGKASSSLGLQDFDLLRV KASSSLGLQDFDLLRVIGRGSYAKVLLVRL K A S L R V 1 1 0 2 0 1 0 1 0 0 4 0 0 1 0 3 0 0 0 0 0 0 14 0 1520.7835 P41743 P41743 245 258 PRKCI Protein kinase C iota type yes yes 2 9.5558E-05 179.6 By MS/MS 5.5 0.5 1 1 2 351560 351560 0 1514 873 1564 3690;3691 3107;3108 3107 2 3172.8 0 ASSTCPLTFENVK PGLHIGKPENKLGLRASSTCPLTFENVKVP LRASSTCPLTFENVKVPEANILGQIGHGYK R A S V K V 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 2 2 0 0 1 0 0 13 0 1452.6919 P45954 P45954 257 269 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 1.429E-05 193.28 By MS/MS 7 0 1 1 1309300 1309300 0 1515 904 1565 3692 3109 3109 1 20554 0 ASSTSPVEISEWLDQK FDAAATSGGSASSEKASSTSPVEISEWLDQ SSTSPVEISEWLDQKLTKSDRPELTGAKVV K A S Q K L 1 0 0 1 0 1 2 0 0 1 1 1 0 0 1 4 1 1 0 1 0 0 16 0 1775.8578 P13804 P13804 188 203 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.00054154 161.25 By MS/MS 8 0 1 1 492850 492850 0 1516 606 1566 3693 3110 3110 1 6222.2 0 ASSVGNVADSTEPTKR ______________________________ SSVGNVADSTEPTKRMLSFQGLAELAHREY M A S K R M 2 1 1 1 0 0 1 1 0 0 0 1 0 0 1 3 2 0 0 2 0 0 16 1 1617.7958 O15294 O15294 2 17 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 2.9405E-11 231.74 By MS/MS By MS/MS 4 0 2 1 1 3046000 3006100 39922 1517 179 1567 3694;3695 3111;3112 3112 2 282890 85060 ASSVLAQR DARIQQKREEQRRRRASSVLAQRRAQSIER EEQRRRRASSVLAQRRAQSIERKQESEPRI R A S Q R R 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 8 0 830.46102 O14681 O14681 45 52 EI24 Etoposide-induced protein 2.4 homolog yes yes 2 0.036301 87.696 By MS/MS 2 0.816 1 1 1 3 507170 507170 0 1518 132 1568 3696;3697;3698 3113 3113 1 119810 0 ASTEGVAIQGQQGTR KNPPKNVQQHEKVQKASTEGVAIQGQQGTR ASTEGVAIQGQQGTRLLPEQLIKEAFILSD K A S T R L 2 1 0 0 0 3 1 3 0 1 0 0 0 0 0 1 2 0 0 1 0 0 15 0 1501.7485 Q92621 Q92621 70 84 NUP205 Nuclear pore complex protein Nup205 yes yes 2 7.5175E-24 279.75 By MS/MS 2.5 1.12 1 1 1 1 4 1571000 1571000 0 1519 2065 1569 3699;3700;3701;3702 3114 3114 1 380190 0 ASTLLRDEELEEIKK ______________________________ ASTLLRDEELEEIKKETGFSHSQITRLYSR R A S K K E 1 1 0 1 0 0 4 0 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 2 1772.952 Q99653 Q99653 5 19 CHP1 Calcineurin B homologous protein 1 yes yes 3 0.0028927 108.06 By MS/MS 8.5 0.5 1 1 2 1665400 1665400 0 1520 2257 1570 3703;3704 3115;3116;3117 3116 3 27102 0 ASTLQLGSPR SAHPGLEFSKTSSSKASTLQLGSPRATGVD TSSSKASTLQLGSPRATGVDEEDVEVFDSF K A S P R A 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 10 0 1028.5615 Q7L8L6 Q7L8L6 88 97 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.00075537 128.35 By MS/MS 5 0 1 1 5695300 5695300 0 1521 1771 1571 3705 3118 3118 1 57121 0 ASTNIQDTEGNTPLHLACDEER AKGNLKMIHILLYYKASTNIQDTEGNTPLH TEGNTPLHLACDEERVEEAKLLVSQGASIY K A S E R V 2 1 2 2 1 1 3 1 1 1 2 0 0 0 1 1 3 0 0 0 0 0 22 0 2470.103 O75832 O75832 163 184 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 3 0.054029 55.688 By MS/MS 8 0 1 1 1343300 1343300 0 1522 350 1572 3706 3119 3119 1 16959 0 ASTSTTIR ______________________________ ______________________________ M A S I R S 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 3 0 0 0 0 0 8 0 835.43995 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 2 9 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 0.051759 62.107 By MS/MS 8.5 1.12 1 1 1 1 4 6291900 0 6291900 + 1523 44;56;40 1573 3707;3708;3709;3710 3120 3120 1 0 8318600 ASTSTTIRSHSSSR ______________________________ MASTSTTIRSHSSSRRGFSASSARLPGVSR M A S S R R 1 2 0 0 0 0 0 0 1 1 0 0 0 0 0 6 3 0 0 0 0 0 14 1 1476.7281 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 2 15 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2;3 5.8872E-05 139.32 By MS/MS By MS/MS 4.47 3.02 3 4 3 2 1 1 2 2 1 6 13 33141000 3113600 30028000 + 1524 44;56;40 1574 3711;3712;3713;3714;3715;3716;3717;3718;3719;3720;3721;3722;3723;3724;3725;3726;3727;3728;3729 3121;3122;3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133;3134;3135;3136;3137 3132 17 297870 40575000 ASTSTTIRSHSSSRR ______________________________ ASTSTTIRSHSSSRRGFSASSARLPGVSRS M A S R R G 1 3 0 0 0 0 0 0 1 1 0 0 0 0 0 6 3 0 0 0 0 0 15 2 1632.8292 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 2 16 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2;3 0.0017059 109.95 By MS/MS 3.2 2.48 1 2 1 1 5 2919800 0 2919800 + 1525 44;56;40 1575 3730;3731;3732;3733;3734 3138;3139;3140;3141;3142 3140 5 0 3987800 ASVAAQQQEEAR YKREEEDREVAAAVRASVAAQQQEEARRSE AVRASVAAQQQEEARRSEDQEEGGRPKKEE R A S A R R 4 1 0 0 0 3 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 12 0 1286.6215 Q86UK7 Q86UK7 351 362 ZNF598 Zinc finger protein 598 yes yes 2 2.0087E-12 229.82 By MS/MS By matching 4 0 2 1 1 657090 647770 9318.9 1526 1821 1576 3735;3736 3143 3143 1 60960 19855 ASVFVLDTVR AHKALFGIFIPSQRRASVFVLDTVRSNQMP PSQRRASVFVLDTVRSNQMPSLGALYSAEH R A S V R S 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 3 0 0 10 0 1105.6132 Q07864 Q07864 1510 1519 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 2.2818E-05 166.07 By MS/MS 2 0.816 1 1 1 3 551130 551130 0 1527 1302 1577 3737;3738;3739 3144 3144 1 164260 0 ASVGECPAPVPVK ______________________________ ______________________________ M A S V K D 2 0 0 0 1 0 1 1 0 0 0 1 0 0 3 1 0 0 0 3 0 0 13 0 1309.67 P56134 P56134 2 14 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.0005105 142.83 By MS/MS 10 0 1 1 1043500 1043500 0 1528 1066 1578 3740 3145 3145 1 56239 0 ASVGECPAPVPVKDK ______________________________ ASVGECPAPVPVKDKKLLEVKLGELPSWIL M A S D K K 2 0 0 1 1 0 1 1 0 0 0 2 0 0 3 1 0 0 0 3 0 0 15 1 1552.7919 P56134 P56134 2 16 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.00044276 145.14 By MS/MS 10 0 1 1 1448200 1448200 0 1529 1066 1579 3741 3146 3146 1 78051 0 ASVGECPAPVPVKDKK ______________________________ SVGECPAPVPVKDKKLLEVKLGELPSWILM M A S K K L 2 0 0 1 1 0 1 1 0 0 0 3 0 0 3 1 0 0 0 3 0 0 16 2 1680.8869 P56134 P56134 2 17 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2;3 0.00029664 182.23 By MS/MS 10 0 2 2 3433000 3433000 0 1530 1066 1580 3742;3743 3147;3148;3149 3149 3 185030 0 ASVPSVQIQGQR QHSSTGPPPLLLAPRASVPSVQIQGQRIIQ APRASVPSVQIQGQRIIQQGLIRVANVPNT R A S Q R I 1 1 0 0 0 3 0 1 0 1 0 0 0 0 1 2 0 0 0 2 0 0 12 0 1268.6837 Q86YP4 Q86YP4 274 285 GATAD2A Transcriptional repressor p66-alpha yes yes 2 0.042485 75.652 By MS/MS 5 0 1 1 535860 535860 0 1531 1853 1581 3744 3150 3150 0 5374.4 0 ASVQDFEK LVSIPDEIFCEEIAKASVQDFEKFLKTL__ FCEEIAKASVQDFEKFLKTL__________ K A S E K F 1 0 0 1 0 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 8 0 922.43961 Q96E29 Q96E29 405 412 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.024804 94.309 By MS/MS 7 0 1 1 1042100 1042100 0 1532 2141 1582 3745 3151 3151 1 16360 0 ASVTNDSGPR ASKSNVTSFQRRGPRASVTNDSGPRLVSIA RRGPRASVTNDSGPRLVSIAGTRPSVRNGQ R A S P R L 1 1 1 1 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 1 0 0 10 0 1002.473 Q96EB1 Q96EB1 36 45 ELP4 Elongator complex protein 4 yes yes 2 0.0052064 115.23 By MS/MS 7 0 1 1 0 0 0 1533 2143 1583 3746 3152 3152 1 0 0 ASYDTLCVLDGDKDSVNCAR VIHEDFIQSCFDRLKASYDTLCVLDGDKDS LCVLDGDKDSVNCARQEAVRMVRVLTVLRE K A S A R Q 2 1 1 4 2 0 0 1 0 0 2 1 0 0 0 2 1 0 1 2 0 0 20 1 2257.9943 Q93008 Q93008 825 844 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 2.9415E-05 115.66 By MS/MS 2 0 1 1 628030 628030 0 1534 2085 1584 3747 3153 3153 1 212420 0 ASYVAPLTAQPATYR FFGRDRSPLRRSPPRASYVAPLTAQPATYR ASYVAPLTAQPATYRAQPSVSLGAAYRAQP R A S Y R A 4 1 0 0 0 1 0 0 0 0 1 0 0 0 2 1 2 0 2 1 0 0 15 0 1607.8308 Q96PK6 Q96PK6 224 238 RBM14 RNA-binding protein 14 yes yes 2 0.00025636 174.23 By MS/MS 5 0 1 1 1029000 1029000 0 1535 2210 1585 3748 3154 3154 1 10321 0 ATAAELLR GKTVLITGANSGLGRATAAELLRLGARVIM ANSGLGRATAAELLRLGARVIMGCRDRARA R A T L R L 3 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 843.48142 Q9HBH5 Q9HBH5 58 65 RDH14 Retinol dehydrogenase 14 yes yes 2 0.010564 110.12 By MS/MS 8 0.816 1 1 1 3 2839200 2839200 0 1536 2505 1586 3749;3750;3751 3155 3155 1 40739 0 ATAATSPALKR ______________________________ ______________________________ M A T K R L 4 1 0 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 0 0 11 1 1085.6193 Q8WTW3 Q8WTW3 2 12 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.0016757 116.52 By MS/MS 6 2 1 1 2 2014600 2014600 0 1537 2010 1587 3752;3753 3156;3157 3156 1 173910 0 ATAAYEQLK ______________________________ ______________________________ M A T L K L 3 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 993.51311 Q9NTJ5 Q9NTJ5 2 10 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.00027721 154.49 By MS/MS 2 0.816 1 1 1 3 2612000 2612000 0 1538 2576 1588 3754;3755;3756 3158;3159;3160 3158 3 615370 0 ATAEALLALPVLR RSVLVMMLEPDPKLRATAEALLALPVLRQP LRATAEALLALPVLRQPRAWGVLWCMAAEA R A T L R Q 4 1 0 0 0 0 1 0 0 0 4 0 0 0 1 0 1 0 0 1 0 0 13 0 1336.8078 Q99640 Q99640 348 360 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase yes yes 2 0.00027559 154.85 By MS/MS 6 0 1 1 583040 583040 0 1539 2256 1589 3757 3161 3161 1 4008 0 ATAENEFVALK LEGYKKKYEEEVSLRATAENEFVALKKDVD VSLRATAENEFVALKKDVDCAYLRKSDLEA R A T L K K 3 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 11 0 1191.6136 CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__Q61726;A6NCN2 CON__O43790 202 212 KRT86;KRT81;KRT83;KRT87P Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Putative keratin-87 protein yes no 2 0.00065734 146.11 By MS/MS 10 0 1 1 151440 0 151440 + 1540 35 1590 3758 3162 3162 1 0 193880 ATAEQISSQTGNK GAQCVIASRKMDVLKATAEQISSQTGNKVH LKATAEQISSQTGNKVHAIQCDVRDPDMVQ K A T N K V 2 0 1 0 0 2 1 1 0 1 0 1 0 0 0 2 2 0 0 0 0 0 13 0 1333.6474 Q16698 Q16698 98 110 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 2 1.2737E-17 220.66 By MS/MS 8 0 1 1 0 0 0 1541 1557 1591 3759 3163 3163 1 0 0 ATAEVLNIGK ______________________________ ______________________________ M A T G K K 2 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P22234 P22234 2 11 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 7.7596E-06 175.91 By MS/MS 7.75 1.48 1 1 1 1 4 4412700 4412700 0 1542 689 1592 3760;3761;3762;3763 3164;3165;3166 3165 3 72744 0 ATAEVLNIGKK ______________________________ ______________________________ M A T K K L 2 0 1 0 0 0 1 1 0 1 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1142.6659 P22234 P22234 2 12 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 3.0286E-07 200.56 By MS/MS By MS/MS 6.29 3.19 1 1 2 1 1 1 6 1 69715000 69604000 110990 1543 689 1593 3764;3765;3766;3767;3768;3769;3770 3167;3168;3169;3170;3171 3170 5 1251800 199890 ATAGAYIASQTVK AFKFRHGVIVAADSRATAGAYIASQTVKKV SRATAGAYIASQTVKKVIEINPYLLGTMAG R A T V K K 4 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1279.6772 P28074 P28074 79 91 PSMB5 Proteasome subunit beta type-5 yes yes 2 1.5324E-07 206.36 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 13489000 13454000 34318 1544 751 1594 3771;3772;3773 3172;3173 3173 2 269820 78256 ATAGAYIASQTVKK AFKFRHGVIVAADSRATAGAYIASQTVKKV RATAGAYIASQTVKKVIEINPYLLGTMAGG R A T K K V 4 0 0 0 0 1 0 1 0 1 0 2 0 0 0 1 2 0 1 1 0 0 14 1 1407.7722 P28074 P28074 79 92 PSMB5 Proteasome subunit beta type-5 yes yes 2 2.484E-07 222.2 By MS/MS 9 0 1 1 2195800 2195800 0 1545 751 1595 3774 3174 3174 1 43213 0 ATAGDTHLGGEDFDNR DVSILTIDDGIFEVKATAGDTHLGGEDFDN TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 221 236 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 5.7998E-24 278.35 By MS/MS By matching 5.75 0.829 2 1 1 3 1 14059000 13992000 66827 1546 550;639 1596 3775;3776;3777;3778 3175;3176 3175 1 132410 56121 ATALIEDIFAR DPLVTNYTVVDFRNRATALIEDIFARDKIP FRNRATALIEDIFARDKIPIVVGGTNYYIE R A T A R D 3 1 0 1 0 0 1 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1218.6608 Q9H3H1 Q9H3H1 102 112 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 2 0.00010068 151.83 By MS/MS 6 0 1 1 175490 175490 0 1547 2436 1597 3779 3177 3177 1 1206.3 0 ATAPVPTVGEGYGYGHESELSQASAAAR ASTSYYGRDRSPLRRATAPVPTVGEGYGYG YGHESELSQASAAARNSLYDMARYEREQYA R A T A R N 6 1 0 0 0 1 3 4 1 0 1 0 0 0 2 3 2 0 2 2 0 0 28 0 2775.31 Q9BWF3 Q9BWF3 314 341 RBM4 RNA-binding protein 4 yes yes 3 0.028701 53.481 By MS/MS 7 0 1 1 1865800 1865800 0 1548 2347 1598 3780 3178 3178 1 29290 0 ATAPYNYSYIFK ______________________________ ______________________________ M A T F K Y 2 0 1 0 0 0 0 0 0 1 0 1 0 1 1 1 1 0 3 0 0 0 12 0 1436.6976 P61106 P61106 2 13 RAB14 Ras-related protein Rab-14 yes yes 2 0.00013778 155.53 By MS/MS 8.5 0.5 1 1 2 388300 388300 0 1549 1110 1599 3781;3782 3179 3179 1 5463.3 0 ATAQDNPKSATEQSGTGIR GLVDSSLPTVGVFAKATAQDNPKSATEQSG DNPKSATEQSGTGIRSESETESEASEITIP K A T I R S 3 1 1 1 0 2 1 2 0 1 0 1 0 0 1 2 3 0 0 0 0 0 19 1 1930.9344 O95831 O95831 511 529 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.00010957 159.54 By MS/MS By MS/MS 5 0 2 1 1 1215100 1166200 48995 1550 429 1600 3783;3784 3180;3181 3181 2 11696 41145 ATAVDPTCAR GGGSRFEFQSLLSSRATAVDPTCARLRASE LLSSRATAVDPTCARLRASESPVHRRGSFP R A T A R L 3 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 0 0 10 0 1060.4971 Q8IY26 Q8IY26 48 57 PPAPDC2 Presqualene diphosphate phosphatase yes yes 2 0.0073726 100.25 By MS/MS 8 0 1 1 2026800 2026800 0 1551 1881 1601 3785 3182;3183 3183 2 25588 0 ATAVVDGAFKEVK ASGNARIGKPAPDFKATAVVDGAFKEVKLS FKATAVVDGAFKEVKLSDYKGKYVVLFFYP K A T V K L 3 0 0 1 0 0 1 1 0 0 0 2 0 1 0 0 1 0 0 3 0 0 13 1 1333.7242 P32119 P32119 17 29 PRDX2 Peroxiredoxin-2 yes yes 2 1.1834E-12 209.8 By MS/MS By MS/MS 6 3 1 1 1 1 3235400 2071100 1164200 1552 796 1602 3786;3787 3184;3185;3186 3185 3 40760 148190 ATCAPQHGAPGPGPADASK SLHETSSVFVDSLTKATCAPQHGAPGPGPA PQHGAPGPGPADASKVVAKGLGLSKAYVGQ K A T S K V 5 0 0 1 1 1 0 3 1 0 0 1 0 0 4 1 1 0 0 0 0 0 19 0 1788.8213 P21333 P21333 2541 2559 FLNA Filamin-A yes yes 2 4.7853E-05 180.56 By MS/MS 2 0 1 1 297890 297890 0 1553 677 1603 3788 3187;3188 3187 2 100760 0 ATDCVGHDVVTLLR SLDAGILITWTKGFKATDCVGHDVVTLLRD KATDCVGHDVVTLLRDAIKRREEFDLDVVA K A T L R D 1 1 0 2 1 0 0 1 1 0 2 0 0 0 0 0 2 0 0 3 0 0 14 0 1554.7824 P19367 P19367 625 638 HK1 Hexokinase-1 yes yes 2;3 0.0013353 110.93 By MS/MS 4 0 2 2 1749100 1749100 0 1554 660 1604 3789;3790 3189;3190 3190 2 164600 0 ATDILPK SSVALYSRKVLIQTKATDILPKWLRFIRGV RKVLIQTKATDILPKWLRFIRGVVDSEDIP K A T P K W 1 0 0 1 0 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 7 0 756.43815 Q12931 Q12931 376 382 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.048731 90.777 By MS/MS 5 0 1 1 1013900 1013900 0 1555 1340 1605 3791 3191 3191 1 10169 0 ATDKSFVEK PGILALLDEECWFPKATDKSFVEKVMQEQG ECWFPKATDKSFVEKVMQEQGTHPKFQKPK K A T E K V 1 0 0 1 0 0 1 0 0 0 0 2 0 1 0 1 1 0 0 1 0 0 9 1 1023.5237 P35579;Q7Z406 P35579 537 545 MYH9;MYH14 Myosin-9;Myosin-14 no no 2 0.026941 89.08 By MS/MS 2.5 0.5 1 1 2 919990 919990 0 1556 824;1788 1606 3792;3793 3192 3192 1 164280 0 ATDLGGTSQAGTSQR LGSQDRARPPSGSSKATDLGGTSQAGTSQR ATDLGGTSQAGTSQRFLENGSQEDLLHGNP K A T Q R F 2 1 0 1 0 2 0 3 0 0 1 0 0 0 0 2 3 0 0 0 0 0 15 0 1448.6855 Q7Z2W4 Q7Z2W4 315 329 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.2109E-24 318.47 By MS/MS 4 2 1 1 1 1 1 1 1 7 20890000 20890000 0 1557 1778 1607 3794;3795;3796;3797;3798;3799;3800 3193;3194;3195;3196;3197 3194 5 1511200 0 ATDPSQVPDVISSIR QPDDPESQMACHVFRATDPSQVPDVISSIR ATDPSQVPDVISSIRQLSKAAMKEDAKPSK R A T I R Q 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1583.8155 O60343 O60343 161 175 TBC1D4 TBC1 domain family member 4 yes yes 2 0.00058999 159.58 By MS/MS 3 0 1 1 365110 365110 0 1558 256 1608 3801 3198 3198 1 6680.6 0 ATDTINSQGQFPSYLETVTK MRLKLFSILSTVLLRATDTINSQGQFPSYL NSQGQFPSYLETVTKDILAPNLQWHAGRTA R A T T K D 1 0 1 1 0 2 1 1 0 1 1 1 0 1 1 2 4 0 1 1 0 0 20 0 2199.0695 Q86Y56 Q86Y56 636 655 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 2.2852E-09 224.34 By MS/MS 4.5 0.5 1 1 2 2059800 2059800 0 1559 1850 1609 3802;3803 3199 3199 1 172310 0 ATEAGSLEAR LQEELRRCRRLGEERATEAGSLEARLRESE LGEERATEAGSLEARLRESEQARALLEREA R A T A R L 3 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1003.4934 Q92974 Q92974 829 838 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.026564 83.647 By MS/MS 3.5 0.5 1 1 2 1008300 1008300 0 1560 2083 1610 3804;3805 3200 3200 1 65036 0 ATEEISKDLR LLLFMDEADAFLRKRATEEISKDLRATLNA FLRKRATEEISKDLRATLNAFLYHMGQHSN R A T L R A 1 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1160.6037 Q5T9A4 Q5T9A4 421 430 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.054824 91.867 By MS/MS By matching 5.33 0.471 2 1 2 1 3704200 3689300 14867 1561 1638 1611 3806;3807;3808 3201 3201 1 35276 12485 ATEEKKPETEAAR ______________________________ ______________________________ M A T A R A 3 1 0 0 0 0 4 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 13 2 1458.7314 P61964 P61964 2 14 WDR5 WD repeat-containing protein 5 yes yes 2;3 0.00028661 151.26 By MS/MS By matching 8 1.15 3 1 1 1 5 1 4825200 4804600 20585 1562 1134 1612 3809;3810;3811;3812;3813;3814 3202;3203 3203 2 77239 37073 ATEEPEDVR DPYPHAEPQQATTPKATEEPEDVRSEAALD QATTPKATEEPEDVRSEAALDQEQITAAYS K A T V R S 1 1 0 1 0 0 3 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 9 0 1044.4724 Q9Y520 Q9Y520 825 833 PRRC2C Protein PRRC2C yes yes 2 0.038891 82.279 By MS/MS 2 0 1 1 289140 289140 0 1563 2905 1613 3815 3204 3204 1 97800 0 ATELLTLLK SSTHSEEGAEAIRTRATELLTLLKMPSVAQ EAIRTRATELLTLLKMPSVAQFVLTPSTEV R A T L K M 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 2 0 0 0 0 0 9 0 1000.6168 O43299 O43299 751 759 AP5Z1 AP-5 complex subunit zeta-1 yes yes 2 0.0078616 104.2 By MS/MS 4.5 0.5 1 1 2 255100 255100 0 1564 202 1614 3816;3817 3205 3205 1 9906.6 0 ATENDIYNFFSPLNPVR STTGHCVHMRGLPYRATENDIYNFFSPLNP ENDIYNFFSPLNPVRVHIEIGPDGRVTGEA R A T V R V 1 1 3 1 0 0 1 0 0 1 1 0 0 2 2 1 1 0 1 1 0 0 17 0 1995.969 P31943;P52597 P31943 300 316 HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 2 0.00013792 183.06 By MS/MS 6 0 1 1 309920 309920 0 1565 791;1019 1615 3818 3206 3206 1 2130.4 0 ATENPEQVASEGLPEPVLR TGSQGLSSLAEEAARATENPEQVASEGLPE PEQVASEGLPEPVLRKVELPVPTHRRPVQA R A T L R K 2 1 1 0 0 1 4 1 0 0 2 0 0 0 3 1 1 0 0 2 0 0 19 0 2035.0222 Q9BYD3 Q9BYD3 31 49 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2;3 1.8558E-57 341.85 By MS/MS By MS/MS 7.14 0.99 2 3 1 1 6 1 16203000 16111000 92315 1566 2370 1616 3819;3820;3821;3822;3823;3824;3825 3207;3208;3209;3210 3208 4 232710 166260 ATEPASPLVPFLQK NHLLIIFIDDSPPEKATEPASPLVPFLQKF KATEPASPLVPFLQKFAEPRNKKPSVLKLE K A T Q K F 2 0 0 0 0 1 1 0 0 0 2 1 0 1 3 1 1 0 0 1 0 0 14 0 1496.8239 Q9Y5W7 Q9Y5W7 308 321 SNX14 Sorting nexin-14 yes yes 2 0.00048101 155.11 By MS/MS 4.5 0.5 1 1 2 701840 701840 0 1567 2925 1617 3826;3827 3211 3211 1 57746 0 ATEPPSPDAGELSLASR SQARRTRGTKALGSKATEPPSPDAGELSLA EPPSPDAGELSLASRLVQQGLLTPDMLKQL K A T S R L 3 1 0 1 0 0 2 1 0 0 2 0 0 0 3 3 1 0 0 0 0 0 17 0 1696.8268 Q8IYB8 Q8IYB8 720 736 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00024731 175.88 By MS/MS 5 0 1 1 2597100 2597100 0 1568 1885 1618 3828 3212 3212 1 26047 0 ATEQLQIVLR LLRELLLPDTERIRRATEQLQIVLRAPAAL ERIRRATEQLQIVLRAPAALPALCDLLASA R A T L R A 1 1 0 0 0 2 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1169.6768 Q8TEX9 Q8TEX9 24 33 IPO4 Importin-4 yes yes 2 0.00089163 125.71 By MS/MS 3 0 1 1 273990 273990 0 1569 2005 1619 3829 3213 3213 1 5013.3 0 ATEVSKTPEAR VSEDVKVSKASGVSKATEVSKTPEAREAPA GVSKATEVSKTPEAREAPATQASSTTQLTD K A T A R E 2 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 11 1 1187.6146 Q9UNF1 Q9UNF1 66 76 MAGED2 Melanoma-associated antigen D2 yes yes 2;3 4.71E-06 191.4 By MS/MS 5 0 2 2 1122400 1122400 0 1570 2787 1620 3830;3831 3214;3215 3214 2 11257 0 ATEYAPK RPLKSLEATLGRLRRATEYAPKKRIEPLSP ATLGRLRRATEYAPKKRIEPLSPELVAAAS R A T P K K 2 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 7 0 778.38612 Q92665 Q92665 139 145 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.01426 124.34 By MS/MS 7 0 1 1 1391300 1391300 0 1571 2067 1621 3832 3216 3216 1 21842 0 ATFDAISK TSARGCTATLGNFAKATFDAISKTYSYLTP TLGNFAKATFDAISKTYSYLTPDLWKETVF K A T S K T 2 0 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 8 0 851.43888 P15880 P15880 239 246 RPS2 40S ribosomal protein S2 yes yes 2 0.00098488 153.04 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 63749000 63494000 254570 1572 627 1622 3833;3834;3835;3836;3837 3217;3218;3219 3218 3 844890 343530 ATFLGLTNEK EPYRNAQNPSLHHPRATFLGLTNEKIVLLS LHHPRATFLGLTNEKIVLLSANSIRATVAT R A T E K I 1 0 1 0 0 0 1 1 0 0 2 1 0 1 0 0 2 0 0 0 0 0 10 0 1092.5815 O95071 O95071 414 423 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 4.3327E-08 198.61 By MS/MS 3 1.41 1 1 1 1 1 5 3357600 3357600 0 1573 384 1623 3838;3839;3840;3841;3842 3220;3221;3222;3223 3221 4 466280 0 ATFLQTDLLK GLYKTLKAHGFEEIRATFLQTDLLKLLVKK FEEIRATFLQTDLLKLLVKKCSKGTGFSKT R A T L K L 1 0 0 1 0 1 0 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 10 0 1148.6441 O43149 O43149 2373 2382 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.014642 87.149 By MS/MS 2 0.816 1 1 1 3 262120 262120 0 1574 191 1624 3843;3844;3845 3224;3225;3226 3224 2 66213 0 ATFVSELEAAKK ______________________________ ______________________________ M A T K K N 3 0 0 0 0 0 2 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 12 1 1292.6976 Q96BN2 Q96BN2 2 13 TADA1 Transcriptional adapter 1 yes yes 2 0.0053829 106.4 By MS/MS 7 0 1 1 1176000 1176000 0 1575 2115 1625 3846 3227 3227 1 18461 0 ATFYLNVLEQK LKRCVMDDDNEVRDRATFYLNVLEQKQKAL VRDRATFYLNVLEQKQKALNAGYILNGLTV R A T Q K Q 1 0 1 0 0 1 1 0 0 0 2 1 0 1 0 0 1 0 1 1 0 0 11 0 1324.7027 Q9Y678 Q9Y678 528 538 COPG1 Coatomer subunit gamma-1 yes yes 2 0.000138 148.56 By MS/MS 4.5 0.5 1 1 2 886700 886700 0 1576 2933 1626 3847;3848 3228;3229 3228 2 66383 0 ATGDETGAKVER GKLMELHGEGSSSGKATGDETGAKVERADG SGKATGDETGAKVERADGYEPPVQESV___ K A T E R A 2 1 0 1 0 0 2 2 0 0 0 1 0 0 0 0 2 0 0 1 0 0 12 1 1232.5997 P61247 P61247 241 252 RPS3A 40S ribosomal protein S3a yes yes 2;3 2.2039E-08 201.09 By MS/MS 8.29 1.03 2 2 2 1 7 21195000 21195000 0 1577 1118 1627 3849;3850;3851;3852;3853;3854;3855 3230;3231;3232;3233 3233 4 285570 0 ATGGGLSSVGGGSSTIK SGLGVGGGFSSSSGRATGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A T I K Y 1 0 0 0 0 0 0 6 0 1 1 1 0 0 0 4 2 0 0 1 0 0 17 0 1434.7314 CON__P04259 CON__P04259 534 550 no no 2 1.217E-17 225.79 By MS/MS By MS/MS 4.8 2.71 1 1 2 2 1 1 1 1 3 7 6401100 1331300 5069800 + 1578 44 1628 3856;3857;3858;3859;3860;3861;3862;3863;3864;3865 3234;3235;3236;3237;3238;3239;3240;3241;3242;3243 3235 10 54225 5843700 ATGGGLSSVGGGSSTIKYTTTSSSSR SGLGVGGGFSSSSGRATGGGLSSVGGGSST GSSTIKYTTTSSSSRKSYKH__________ R A T S R K 1 1 0 0 0 0 0 6 0 1 1 1 0 0 0 8 5 0 1 1 0 0 26 1 2405.167 CON__P04259 CON__P04259 534 559 no no 3 0.00020084 89.201 By MS/MS 9 1 1 1 2 1149600 0 1149600 + 1579 44 1629 3866;3867 3244;3245;3246;3247;3248 3247 5 0 1505400 ATGILLYGLASR AATQAQQTLGSTIDKATGILLYGLASRLRD IDKATGILLYGLASRLRDTRRLSFLVSYIA K A T S R L 2 1 0 0 0 0 0 2 0 1 3 0 0 0 0 1 1 0 1 0 0 0 12 0 1233.7081 P47897 P47897 51 62 QARS Glutamine--tRNA ligase yes yes 2 9.3995E-09 215.83 By MS/MS 4 0 1 1 330660 330660 0 1580 928 1630 3868 3249 3249 1 31118 0 ATGSEVSQR TENLRRVEEDIQQQKATGSEVSQRKQQLEV DIQQQKATGSEVSQRKQQLEVELRQVTQMR K A T Q R K 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 9 0 933.45157 P15924 P15924 1435 1443 DSP Desmoplakin yes yes 2 0.028702 96.034 By MS/MS 1 0 1 1 0 0 0 1581 628 1631 3869 3250 3250 1 0 0 ATGSPVSIFVYDVKPGAEEQTQVAK GGLPGPWALHRGRKKATGSPVSIFVYDVKP YDVKPGAEEQTQVAKAAFKRFKTLRHPNIL K A T A K A 3 0 0 1 0 2 2 2 0 1 0 2 0 1 2 2 2 0 1 4 0 0 25 1 2620.3384 Q96KG9 Q96KG9 38 62 SCYL1 N-terminal kinase-like protein yes yes 3 0.0011542 83.065 By MS/MS 4 0 1 1 643140 643140 0 1582 2188 1632 3870 3251 3251 1 60524 0 ATGYPLAYVAAK EVNARLSRSSALASKATGYPLAYVAAKLAL ASKATGYPLAYVAAKLALGIPLPELRNSVT K A T A K L 4 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 1 0 2 1 0 0 12 0 1223.655 P27708 P27708 697 708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0077538 95.523 By MS/MS 3 1.41 1 1 1 1 1 5 3246100 3246100 0 1583 745 1633 3871;3872;3873;3874;3875 3252;3253;3254 3253 3 811050 0 ATHDGAPELGAGGTR SDVYGANLFHQYLQKATHDGAPELGAGGTR ATHDGAPELGAGGTRQQQPSASQSCISILV K A T T R Q 3 1 0 1 0 0 1 4 1 0 1 0 0 0 1 0 2 0 0 0 0 0 15 0 1408.6695 Q9BXW7 Q9BXW7 332 346 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 9.7949E-05 182.41 By MS/MS 7 0 1 1 4115100 4115100 0 1584 2361 1634 3876 3255 3255 1 64599 0 ATHGQTCAR ______________________________ ______________________________ M A T A R P 2 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1000.4509 P45880 P45880 2 10 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.0028192 114.86 By MS/MS 8 0 1 1 2390800 2390800 0 1585 903 1635 3877 3256 3256 1 30184 0 ATHIKLPR YINVKLKAAEEIGIKATHIKLPRTTTESEV AEEIGIKATHIKLPRTTTESEVMKYITSLN K A T P R T 1 1 0 0 0 0 0 0 1 1 1 1 0 0 1 0 1 0 0 0 0 0 8 1 934.57123 P11586 P11586 67 74 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 3 0.0079532 107.9 By MS/MS 4 0 1 1 605440 605440 0 1586 582 1636 3878 3257 3257 1 56976 0 ATIELCSTHANDASALR LVLDAFALPLTNLFKATIELCSTHANDASA IELCSTHANDASALRILFSSLILISKLFYS K A T L R I 4 1 1 1 1 0 1 0 1 1 2 0 0 0 0 2 2 0 0 0 0 0 17 0 1828.8738 P55060 P55060 190 206 CSE1L Exportin-2 yes yes 2 0.00012266 185.32 By MS/MS 4 0 1 1 1199700 1199700 0 1587 1053 1637 3879 3258 3258 1 112900 0 ATIGADFLTK LMNQYVNKKFSNQYKATIGADFLTKEVMVD SNQYKATIGADFLTKEVMVDDRLVTMQIWD K A T T K E 2 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 2 0 0 0 0 0 10 0 1035.5601 P51149 P51149 39 48 RAB7A Ras-related protein Rab-7a yes yes 2 0.00061223 131.12 By MS/MS 9 0 1 1 2885100 2885100 0 1588 990 1638 3880 3259 3259 1 56779 0 ATILDLSCNK DLNEVPVKELAALPKATILDLSCNKLTTLP AALPKATILDLSCNKLTTLPSDFCGLTHLV K A T N K L 1 0 1 1 1 0 0 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 1133.5751 Q96AG4 Q96AG4 41 50 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 1.6047E-05 170.5 By MS/MS 8.33 1.25 1 1 1 3 9947300 9947300 0 1589 2107 1639 3881;3882;3883 3260;3261;3262 3262 3 159320 0 ATISLSDSDLLR LLTDGDVHIRDDGRRATISLSDSDLLRLEG GRRATISLSDSDLLRLEGDSRTVRLLKELR R A T L R L 1 1 0 2 0 0 0 0 0 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1289.6827 Q7L2E3 Q7L2E3 1116 1127 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 6.7933E-09 218.6 By MS/MS By matching 3.75 0.829 2 1 1 3 1 1416400 1365700 50619 1590 1761 1640 3884;3885;3886;3887 3263;3264 3263 2 56569 6443 ATISNDGATILK GPRGMDKLIVDGRGKATISNDGATILKLLD RGKATISNDGATILKLLDVVHPAAKTLVDI K A T L K L 2 0 1 1 0 0 0 1 0 2 1 1 0 0 0 1 2 0 0 0 0 0 12 0 1202.6507 Q99832 Q99832 56 67 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00029101 156.16 By MS/MS By MS/MS 7.43 1.5 3 1 1 1 1 6 1 80124000 80017000 107670 1591 2270 1641 3888;3889;3890;3891;3892;3893;3894 3265;3266;3267;3268;3269;3270 3269 6 591410 110340 ATKPQPVNTSSVTVK ESSAATKKLSATIPKATKPQPVNTSSVTVK ATKPQPVNTSSVTVKSNRSSNMTATTKFVS K A T V K S 1 0 1 0 0 1 0 0 0 0 0 2 0 0 2 2 3 0 0 3 0 0 15 1 1555.857 Q8WWK9 Q8WWK9 215 229 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.0071433 114.87 By MS/MS 4.5 0.5 1 1 2 1300200 1300200 0 1592 2035 1642 3895;3896 3271 3271 1 54227 0 ATLENDFVVLK EEEYKSKYEEEAHRRATLENDFVVLKKDVD AHRRATLENDFVVLKKDVDGVFLSKMELEG R A T L K K 1 0 1 1 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 2 0 0 11 0 1247.6762 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 209 219 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.00088615 140.45 By matching By MS/MS 3.5 0.5 1 1 1 1 154490 80682 73807 + 1593 70 1643 3897;3898 3272 3272 1 7592.7 9394.5 ATLENDFVVLKK EEEYKSKYEEEAHRRATLENDFVVLKKDVD HRRATLENDFVVLKKDVDGVFLSKMELEGK R A T K K D 1 0 1 1 0 0 1 0 0 0 2 2 0 1 0 0 1 0 0 2 0 0 12 1 1375.7711 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 209 220 KRT78 Keratin, type II cytoskeletal 78 yes no 2;3 1.147E-08 194.12 By matching By MS/MS 3.5 0.5 2 2 2 2 2347000 1116600 1230400 + 1594 70 1644 3899;3900;3901;3902 3273;3274 3274 2 105080 156610 ATLLGEELASAAAAR QLRGAQELAASSQQKATLLGEELASAAAAR ATLLGEELASAAAARDRTIAELHRSRLEVA K A T A R D 6 1 0 0 0 0 2 1 0 0 3 0 0 0 0 1 1 0 0 0 0 0 15 0 1442.7729 Q9P1Z2 Q9P1Z2 359 373 CALCOCO1 Calcium-binding and coiled-coil domain-containing protein 1 yes yes 2 0.00010305 181.31 By MS/MS 4 0 1 1 141170 141170 0 1595 2674 1645 3903 3275 3275 1 13285 0 ATLSSIR PATSYVRTTINKNARATLSSIRHMIRKNKY TTINKNARATLSSIRHMIRKNKYRPDLRMA R A T I R H 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 7 0 746.42865 P46779 P46779 88 94 RPL28 60S ribosomal protein L28 yes yes 2 0.014248 124.37 By MS/MS 9.5 0.5 1 1 2 2887500 2887500 0 1596 917 1646 3904;3905 3276 3276 1 101180 0 ATLYVTAIEDR RDKWLAPDGLIFPDRATLYVTAIEDRQYKD FPDRATLYVTAIEDRQYKDYKIHWWENVYG R A T D R Q 2 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 2 0 1 1 0 0 11 0 1250.6507 Q99873 Q99873 196 206 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.00080165 143.96 By MS/MS By MS/MS 4.5 3.04 1 1 1 1 3 1 1107000 1007700 99260 1597 2271 1647 3906;3907;3908;3909 3277;3278;3279 3278 3 235240 178770 ATNAQFDSPEILR LYQHNLTGILETAVRATNAQFDSPEILRRL VRATNAQFDSPEILRRLDVRLLEVSPGDTG R A T L R R 2 1 1 1 0 1 1 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 13 0 1460.726 Q96CW5 Q96CW5 607 619 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 2.8616E-17 263.07 By MS/MS 4.5 0.5 1 1 2 4908000 4908000 0 1598 2128 1648 3910;3911 3280 3280 1 415340 0 ATNAQFDSPEILRR LYQHNLTGILETAVRATNAQFDSPEILRRL RATNAQFDSPEILRRLDVRLLEVSPGDTGW R A T R R L 2 2 1 1 0 1 1 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 14 1 1616.8271 Q96CW5 Q96CW5 607 620 TUBGCP3 Gamma-tubulin complex component 3 yes yes 3 0.034519 67.519 By MS/MS 4 0 1 1 887560 887560 0 1599 2128 1649 3912 3281 3281 1 83526 0 ATNDEIFSILK GHSVALCLAVAFKSKATNDEIFSILKDVPN FKSKATNDEIFSILKDVPNPNQDDDDDEGF K A T L K D 1 0 1 1 0 0 1 0 0 2 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1249.6554 Q09161 Q09161 512 522 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 2 5.1596E-13 228.98 By MS/MS 5 0.816 1 1 1 3 1151500 1151500 0 1600 1319 1650 3913;3914;3915 3282;3283 3283 2 49238 0 ATNFLAHEK ______________________________ ______________________________ M A T E K I 2 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1029.5243 P29692 P29692 2 10 EEF1D Elongation factor 1-delta yes yes 2 0.00010953 162.64 By MS/MS 7 0 1 1 35130000 35130000 0 1601 760 1651 3916 3284;3285 3285 2 551480 0 ATNIEVLSNTFQFTNEAR VRFNISTDRRDKLERATNIEVLSNTFQFTN IEVLSNTFQFTNEAREMGVIAAMRDGFGFI R A T A R E 2 1 3 0 0 1 2 0 0 1 1 0 0 2 0 1 3 0 0 1 0 0 18 0 2054.0069 O75534 O75534 331 348 CSDE1 Cold shock domain-containing protein E1 yes yes 2 1.9537E-57 352.27 By MS/MS 4 0 1 1 237670 237670 0 1602 333 1652 3917 3286;3287 3286 2 22367 0 ATNYNAGDR NWMCLAKWESGYNTRATNYNAGDRSTDYGI SGYNTRATNYNAGDRSTDYGIFQINSRYWC R A T D R S 2 1 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 9 0 980.43117 P61626 P61626 60 68 LYZ Lysozyme C yes yes 2 0.00049185 151.22 By MS/MS By MS/MS 6.33 3.02 2 1 1 1 1 1 2 2 7 1989200 898510 1090700 1603 1128 1653 3918;3919;3920;3921;3922;3923;3924;3925;3926 3288;3289;3290;3291;3292;3293;3294 3293 7 82777 1557300 ATQALVLAPTR TFAISILQQIELDLKATQALVLAPTRELAQ LDLKATQALVLAPTRELAQQIQKVVMALGD K A T T R E 3 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 11 0 1139.6663 P60842 P60842 100 110 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 0.00012732 149.49 By MS/MS 5.78 2.9 1 1 1 1 1 1 1 1 1 9 633490000 633490000 0 1604 1097 1654 3927;3928;3929;3930;3931;3932;3933;3934;3935 3295;3296;3297;3298;3299;3300;3301;3302 3295 8 8613000 0 ATQALVLAPTRELAQQIQK TFAISILQQIELDLKATQALVLAPTRELAQ LVLAPTRELAQQIQKVVMALGDYMGASCHA K A T Q K V 4 1 0 0 0 4 1 0 0 1 3 1 0 0 1 0 2 0 0 1 0 0 19 1 2078.1848 P60842 P60842 100 118 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 1.1628E-16 241.41 By MS/MS 6.5 0.5 2 2 4 32714000 32714000 0 1605 1097 1655 3936;3937;3938;3939 3303;3304;3305 3304 3 234300 0 ATQELIPIEDFITPLK EAKERLKRKIRKLEKATQELIPIEDFITPL TQELIPIEDFITPLKFLDKARERPQVELTF K A T L K F 1 0 0 1 0 1 2 0 0 3 2 1 0 1 2 0 2 0 0 0 0 0 16 0 1827.003 Q9NQ50 Q9NQ50 78 93 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2 0.00041534 167.22 By MS/MS 9 0 1 1 188160 188160 0 1606 2536 1656 3940 3306 3306 1 3703 0 ATQQQHDFTLTQTADGR EGSLSARWPVAGQIRATQQQHDFTLTQTAD QQQHDFTLTQTADGRSSFDWLTGSSTDPLV R A T G R S 2 1 0 2 0 4 0 1 1 0 1 0 0 1 0 0 4 0 0 0 0 0 17 0 1916.8977 P78527 P78527 2637 2653 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 2.1833E-44 386.35 By MS/MS 2.57 1.4 2 2 1 1 1 7 10172000 10172000 0 1607 1225 1657 3941;3942;3943;3944;3945;3946;3947 3307;3308;3309;3310 3309 4 2539600 0 ATSFLLALEPELEAR AEVVLAHLGGGSTSRATSFLLALEPELEAR ATSFLLALEPELEARLAHLGVQVKGEDEEE R A T A R L 3 1 0 0 0 0 3 0 0 0 4 0 0 1 1 1 1 0 0 0 0 0 15 0 1658.8879 P04843 P04843 66 80 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.00039779 168.02 By MS/MS 5.5 0.5 1 1 2 3050800 3050800 0 1608 478 1658 3948;3949 3311;3312 3311 2 27210 0 ATSILEFYR ATLSVGGKTVSRFRKATSILEFYRELGLPP VSRFRKATSILEFYRELGLPPKQTVKIFNI K A T Y R E 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 1 1 0 1 0 0 0 9 0 1098.571 P09001 P09001 158 166 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.00034583 151.44 By MS/MS 7.5 0.5 1 1 2 2477100 2477100 0 1609 531 1659 3950;3951 3313;3314 3314 2 34098 0 ATSLGRPEEEEDELAHR HVQRAEMLPKTSGTRATSLGRPEEEEDELA SLGRPEEEEDELAHRCSSFMAPPVTDLGEL R A T H R C 2 2 0 1 0 0 5 1 1 0 2 0 0 0 1 1 1 0 0 0 0 0 17 1 1937.9079 P36551 P36551 110 126 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 3 0.0085334 86.488 By MS/MS 7 0 1 1 869100 869100 0 1610 837 1660 3952 3315 3315 1 13643 0 ATSSSSGSLSATGR LKLSPSPSSRVTVSRATSSSSGSLSATGRL RATSSSSGSLSATGRLGRSKRKRLEVEEPL R A T G R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 0 6 2 0 0 0 0 0 14 0 1267.6004 Q03252 Q03252 417 430 LMNB2 Lamin-B2 yes yes 2 0.00043396 143 By MS/MS 5 0 1 1 616460 616460 0 1611 1286 1661 3953 3316 3316 1 6182.8 0 ATSTATSGFAGAIGQK KIDSEGGVSANHTSRATSTATSGFAGAIGQ TSTATSGFAGAIGQKLPPFSYAYTELEAIM R A T Q K L 4 0 0 0 0 1 0 3 0 1 0 1 0 1 0 2 3 0 0 0 0 0 16 0 1466.7365 P51659 P51659 316 331 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 2 0.00037044 142.76 By MS/MS By matching 4 1.87 1 1 1 1 2 2 2175600 1745700 429870 1612 1004 1662 3954;3955;3956;3957 3317;3318 3317 2 15136 567100 ATSTSTSGAGDVGK PSYKSSPTRNIEKKKATSTSTSGAGDVGKE KATSTSTSGAGDVGKEALSGGEASLVEKVK K A T G K E 2 0 0 1 0 0 0 3 0 0 0 1 0 0 0 3 3 0 0 1 0 0 14 0 1237.5786 Q96T17 Q96T17 229 242 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.0013271 142.07 By MS/MS By matching 4 0 2 1 1 285860 193830 92034 1613 2237 1663 3958;3959 3319 3319 1 18241 196090 ATSVLCCLR ______________________________ ______________________________ M A T L R C 1 1 0 0 2 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 1078.5263 Q5W111 Q5W111 2 10 SPRYD7 SPRY domain-containing protein 7 yes yes 2 0.0089296 104.06 By MS/MS 9 0 1 1 126400 126400 0 1614 1662 1664 3960 3320 3320 1 2487.5 0 ATTADGSSILDR NQLQEFAAMLMPHQKATTADGSSILDRAVI HQKATTADGSSILDRAVIEHNLLSASKLYN K A T D R A 2 1 0 2 0 0 0 1 0 1 1 0 0 0 0 2 2 0 0 0 0 0 12 0 1205.5888 Q9BT78 Q9BT78 291 302 COPS4 COP9 signalosome complex subunit 4 yes yes 2 3.3686E-05 172.56 By MS/MS 7 0 1 1 2366600 2366600 0 1615 2315 1665 3961 3321 3321 1 37151 0 ATTENLLNLVDQEER VIPNPTTVFKITVGRATTENLLNLVDQEER ATTENLLNLVDQEERSAAPEPIQPISVIPG R A T E R S 1 1 2 1 0 1 3 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 15 0 1743.8639 Q8N5C8 Q8N5C8 462 476 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 yes yes 2 3.4154E-11 289.37 By MS/MS 5 0 1 1 433390 433390 0 1616 1921 1666 3962 3322 3322 1 4346.7 0 ATTSGSNSISVR AQQETGEREASCRDKATTSGSNSISVRAFL RDKATTSGSNSISVRAFLDEDDMSLEEIKN K A T V R A 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 4 2 0 0 1 0 0 12 0 1178.5891 Q86XL3 Q86XL3 627 638 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 6.9973E-05 161.19 By MS/MS 4.5 0.5 1 1 2 1482300 1482300 0 1617 1845 1667 3963;3964 3323 3323 1 124470 0 ATVATENNK LTNEKIVLLSANSIRATVATENNKVATWVD SANSIRATVATENNKVATWVDETLSSVASK R A T N K V 2 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 9 0 946.47197 O95071 O95071 434 442 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0095404 101.25 By MS/MS 2 0 1 1 180910 180910 0 1618 384 1668 3965 3324 3324 1 61192 0 ATVFLNPAACK VFGNQLIPPNAQVKKATVFLNPAACKGKAR QVKKATVFLNPAACKGKARTLFEKNAAPIL K A T C K G 3 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 11 0 1190.6118 Q53H12 Q53H12 63 73 AGK Acylglycerol kinase, mitochondrial yes yes 2 2.1058E-05 162.88 By MS/MS 7 0 1 1 5009000 5009000 0 1619 1589 1669 3966 3325 3325 1 78633 0 ATVLESEGTR KESMQMQVEAERRKRATVLESEGTRESAIN ERRKRATVLESEGTRESAINVAEGKKQAQI R A T T R E 1 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1061.5353 Q9UJZ1 Q9UJZ1 202 211 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.00015865 174.86 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 6204000 6062600 141410 1620 2755 1670 3967;3968;3969 3326;3327 3327 2 94142 254680 ATVLESEGTRESAINVAEGK KESMQMQVEAERRKRATVLESEGTRESAIN SEGTRESAINVAEGKKQAQILASEAEKAEQ R A T G K K 3 1 1 0 0 0 4 2 0 1 1 1 0 0 0 2 2 0 0 2 0 0 20 1 2060.0386 Q9UJZ1 Q9UJZ1 202 221 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 0.0010697 154.26 By MS/MS 7 0 1 1 2620600 2620600 0 1621 2755 1671 3970 3328 3328 1 41139 0 ATVLESEGTRESAINVAEGKK KESMQMQVEAERRKRATVLESEGTRESAIN EGTRESAINVAEGKKQAQILASEAEKAEQI R A T K K Q 3 1 1 0 0 0 4 2 0 1 1 2 0 0 0 2 2 0 0 2 0 0 21 2 2188.1335 Q9UJZ1 Q9UJZ1 202 222 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 1.8812E-05 157.62 By MS/MS By matching 7 0 2 1 1 13763000 13731000 32298 1622 2755 1672 3971;3972 3329 3329 1 215550 58168 ATVLTTER LVGMTPEIIQKLQDKATVLTTERKKRGKTV IQKLQDKATVLTTERKKRGKTVPEELVKPE K A T E R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 3 0 0 1 0 0 8 0 889.4869 Q9UMS4 Q9UMS4 180 187 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.0025487 137.9 By MS/MS By matching 6 0 2 1 1 4407000 4356400 50609 1623 2782 1673 3973;3974 3330 3330 1 29947 51860 ATVNQDTR DDAVRPEAEGEEEGRATVNQDTRLDNRVID EGEEEGRATVNQDTRLDNRVIDLRTSTSQA R A T T R L 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 903.44101 P14868 P14868 172 179 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0066583 117.81 By MS/MS By matching 5.25 1.92 1 2 1 3 1 1369900 1336800 33114 1624 620 1674 3975;3976;3977;3978 3331;3332 3332 2 55620 33932 ATVNTFGYIAK ELLELLKAHKKAIRRATVNTFGYIAKAIGP AIRRATVNTFGYIAKAIGPHDVLATLLNNL R A T A K A 2 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1183.6237 O75533 O75533 1076 1086 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0065626 99.788 By MS/MS 3 0 1 1 1343300 1343300 0 1625 332 1675 3979 3333 3333 1 24578 0 ATVPLQSNVIEAAPDMK ILVDLLTLAHLHVSRATVPLQSNVIEAAPD VPLQSNVIEAAPDMKRESEKEWYFGNADKE R A T M K R 3 0 1 1 0 1 1 0 0 1 1 1 1 0 2 1 1 0 0 2 0 0 17 0 1782.9186 O75165 O75165 953 969 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00054173 182.72 By MS/MS 2 0 1 1 188040 188040 0 1626 302 1676 3980 3334 3334 1 63602 0 ATVQQLEGR ______________________________ ______________________________ M A T G R W 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5302 Q01469 Q01469 2 10 FABP5 Fatty acid-binding protein, epidermal yes yes 2 7.4675E-05 161.27 By MS/MS By MS/MS 6.1 3.11 1 1 1 1 1 1 1 1 2 1 9 4629700 1378700 3251000 1627 1267 1677 3981;3982;3983;3984;3985;3986;3987;3988;3989;3990 3335;3336;3337;3338;3339;3340;3341;3342 3336 8 74307 3525200 ATVTATTKVPEIR ______________________________ ______________________________ M A T I R D 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 4 0 0 2 0 0 13 1 1385.7878 Q9Y230 Q9Y230 2 14 RUVBL2 RuvB-like 2 yes yes 2 9.4933E-12 240 By MS/MS By matching 6.75 0.829 2 1 1 3 1 38826000 38716000 109960 1628 2810 1678 3991;3992;3993;3994 3343 3343 1 275370 112680 ATVTATTKVPEIRDVTR ______________________________ VTATTKVPEIRDVTRIERIGAHSHIRGLGL M A T T R I 2 2 0 1 0 0 1 0 0 1 0 1 0 0 1 0 5 0 0 3 0 0 17 2 1857.032 Q9Y230 Q9Y230 2 18 RUVBL2 RuvB-like 2 yes yes 3 0.0021809 91.969 By MS/MS 6 0 1 1 7581400 7581400 0 1629 2810 1679 3995 3344 3344 1 52116 0 ATYDGNHDTFR ACSYATVYLIYLKFKATYDGNHDTFRVEFL LKFKATYDGNHDTFRVEFLVVPVGGLSFLV K A T F R V 1 1 1 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 1 0 0 0 11 0 1295.5531 P33947;P24390 P33947 84 94 KDELR2;KDELR1 ER lumen protein-retaining receptor 2;ER lumen protein-retaining receptor 1 yes no 2 1.7597E-05 150.15 By MS/MS 1.5 0.5 1 1 2 409050 409050 0 1630 712 1680 3996;3997 3345 3345 1 119040 0 ATYDKLCK GKVRDKLNNLVLFDKATYDKLCKEVPNYKL NLVLFDKATYDKLCKEVPNYKLITPAVVSE K A T C K E 1 0 0 1 1 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 0 8 1 997.49027 P62851 P62851 53 60 RPS25 40S ribosomal protein S25 yes yes 2 0.02165 111.95 By MS/MS 9 0 1 1 10362000 10362000 0 1631 1176 1681 3998 3346 3346 1 203920 0 ATYLEFIQQNEER ______________________________ ______________________________ M A T E R D 1 1 1 0 0 2 3 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 13 0 1639.7842 Q15437 Q15437 2 14 SEC23B Protein transport protein Sec23B yes yes 2 3.4779E-05 181.4 By MS/MS 5 0 1 1 56886 56886 0 1632 1514 1682 3999 3347;3348 3347 2 570.53 0 ATYLPQLTTEK LINTLIRKHGTEEQKATYLPQLTTEKVGSF EEQKATYLPQLTTEKVGSFCLSEAGAGSDS K A T E K V 1 0 0 0 0 1 1 0 0 0 2 1 0 0 1 0 3 0 1 0 0 0 11 0 1263.6711 P45954 P45954 160 170 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0031952 100.82 By MS/MS 7 0 1 1 2483600 2483600 0 1633 904 1683 4000 3349 3349 1 38988 0 AVAAGNSCR DFIRMTKGITMATAKAVAAGNSCRQEDVIA TMATAKAVAAGNSCRQEDVIATANLSRRAI K A V C R Q 3 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 9 0 904.4185 Q9Y490;Q9Y4G6 Q9Y490 2189 2197 TLN1;TLN2 Talin-1;Talin-2 no no 2 0.046831 77.318 By MS/MS 2 0 1 1 370540 370540 0 1634 2888;2895 1684 4001 3350 3350 1 125330 0 AVAALLTIPEAEK QEFEKQDELKRSAMRAVAALLTIPEAEKSP MRAVAALLTIPEAEKSPLMSEFQSQISSNP R A V E K S 4 0 0 0 0 0 2 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1324.7602 Q86VP6 Q86VP6 1179 1191 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00036124 145.99 By MS/MS 3.5 0.5 1 1 2 219130 219130 0 1635 1831 1685 4002;4003 3351 3351 1 8623.2 0 AVACSGAAQVR AMKLGAVKRILRAEKAVACSGAAQVRIKIL RAEKAVACSGAAQVRIKILASLVTQFNSGL K A V V R I 4 1 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 2 0 0 11 0 1088.5397 Q92797 Q92797 575 585 SYMPK Symplekin yes yes 2 0.011458 90.108 By MS/MS 3 0 1 1 636000 636000 0 1636 2071 1686 4004 3352 3352 1 11637 0 AVAENQPFLIEAMTYR DVFAVYNATKEARRRAVAENQPFLIEAMTY VAENQPFLIEAMTYRIGHHSTSDDSSAYRS R A V Y R I 3 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 16 0 1851.9189 P12694 P12694 317 332 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes yes 2 0.00043447 128.35 By MS/MS 7 0 2 2 190460 190460 0 1637 594 1687;1688 4005;4006 3353;3354 3354 277 2 2989.9 0 AVAEQIPLLVQGVR KASAGPQPLLVQSCKAVAEQIPLLVQGVRG KAVAEQIPLLVQGVRGSQAQPDSPSAQLAL K A V V R G 2 1 0 0 0 2 1 1 0 1 2 0 0 0 1 0 0 0 0 3 0 0 14 0 1491.8773 Q9Y490 Q9Y490 958 971 TLN1 Talin-1 yes yes 2;3 0.001321 115.37 By MS/MS 2 0 2 2 921520 921520 0 1638 2888 1689 4007;4008 3355;3356;3357 3357 3 311690 0 AVAEQVLHSQSR LYRKLVAKDGSCLFRAVAEQVLHSQSRHVE LFRAVAEQVLHSQSRHVEVRMACIHYLREN R A V S R H 2 1 0 0 0 2 1 0 1 0 1 0 0 0 0 2 0 0 0 2 0 0 12 0 1323.6895 Q01804 Q01804 49 60 OTUD4 OTU domain-containing protein 4 yes yes 2 0.00028202 145.14 By MS/MS By matching 2.67 0.471 1 2 1 2 542340 403540 138800 1639 1270 1690 4009;4010;4011 3358 3358 1 7383.6 79448 AVAGDASESALLK AVFQANQENLPILKRAVAGDASESALLKCI KRAVAGDASESALLKCIELCCGSVKEMRER R A V L K C 4 0 0 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 13 0 1230.6456 P05023 P05023 446 458 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 7.9665E-08 215.72 By MS/MS 3.57 1.59 1 1 1 2 1 1 7 31760000 31760000 0 1640 481 1691 4012;4013;4014;4015;4016;4017;4018 3359;3360;3361;3362;3363 3360 5 4463600 0 AVAGNISDPGLQK DELSKTISPMVMDAKAVAGNISDPGLQKSF AKAVAGNISDPGLQKSFLDSGYRILGAVAK K A V Q K S 2 0 1 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1268.6725 P18206 P18206 803 815 VCL Vinculin yes yes 2 1.6739E-07 204.56 By MS/MS By matching 3.75 0.829 2 1 1 3 1 2564300 2444600 119730 1641 653 1692 4019;4020;4021;4022 3364;3365;3366 3364 3 74101 15239 AVAGWEEVLR LLSHDSGSDHLAFVRAVAGWEEVLRWQDRS LAFVRAVAGWEEVLRWQDRSSRENYLEENL R A V L R W 2 1 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 1 0 2 0 0 10 0 1128.5928 Q7L2E3 Q7L2E3 942 951 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.019204 87.308 By MS/MS 3 0 1 1 1283900 1283900 0 1642 1761 1693 4023 3367 3367 0 23491 0 AVAHHTDCTFIR LLYGPPGTGKTLLARAVAHHTDCTFIRVSG LARAVAHHTDCTFIRVSGSELVQKFIGEGA R A V I R V 2 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 2 0 0 1 0 0 12 0 1426.6776 P62195 P62195 202 213 PSMC5 26S protease regulatory subunit 8 yes yes 2;3 0.00014189 152.7 By MS/MS 7 0.707 1 2 1 4 7780100 7780100 0 1643 1142 1694 4024;4025;4026;4027 3368;3369;3370;3371;3372 3370 5 116340 0 AVAHHTTAAFIR LMYGPPGCGKTMLAKAVAHHTTAAFIRVVG LAKAVAHHTTAAFIRVVGSEFVQKYLGEGP K A V I R V 4 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 1 0 0 12 0 1293.6942 P43686 P43686 218 229 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.00074651 127.51 By MS/MS 7 0.816 1 1 1 3 3423900 3423900 0 1644 900 1695 4028;4029;4030 3373 3373 1 29791 0 AVANESGLNFISVK LLAGPPGCGKTLLAKAVANESGLNFISVKG KAVANESGLNFISVKGPELLNMYVGESERA K A V V K G 2 0 2 0 0 0 1 1 0 1 1 1 0 1 0 2 0 0 0 2 0 0 14 0 1447.7671 O15381 O15381 634 647 NVL Nuclear valosin-containing protein-like yes yes 2 3.1466E-11 238.01 By MS/MS 4 0 1 1 1060000 1060000 0 1645 187 1696 4031 3374 3374 1 99753 0 AVANQTSATFLR ILYGPPGTGKTLLAKAVANQTSATFLRVVG LAKAVANQTSATFLRVVGSELIQKYLGDGP K A V L R V 3 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 12 0 1277.6728 P62191 P62191 238 249 PSMC1 26S protease regulatory subunit 4 yes yes 2 1.0249E-09 224.75 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 15219000 15071000 147660 1646 1141 1697 4032;4033;4034;4035 3375;3376;3377;3378;3379 3378 5 127170 151310 AVAQALEVIPR EKSKAMTGVEQWPYRAVAQALEVIPRTLIQ WPYRAVAQALEVIPRTLIQNCGASTIRLLT R A V P R T 3 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 11 0 1165.6819 P49368 P49368 439 449 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.3092E-05 157.75 By MS/MS By MS/MS 5.5 2.63 1 1 1 1 2 2 1 1 1 1 10 2 228780000 228550000 228670 1647 947 1698 4036;4037;4038;4039;4040;4041;4042;4043;4044;4045;4046;4047 3380;3381;3382;3383;3384;3385;3386;3387;3388;3389;3390;3391 3391 12 2401200 224390 AVAQPLGR GLVLVPSRELAQQVRAVAQPLGRSLGLLVR ELAQQVRAVAQPLGRSLGLLVRDLEGGHGM R A V G R S 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 810.47119 Q9NUL7 Q9NUL7 221 228 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.02232 97.068 By MS/MS By matching 6 0 2 1 1 2523900 2488200 35764 1648 2582 1699 4048;4049 3392 3392 1 17104 36648 AVASAAAALVLK DTDPHFQDALMQLAKAVASAAAALVLKAKS LAKAVASAAAALVLKAKSVAQRTEDSGLQT K A V L K A 6 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 2 0 0 12 0 1083.6652 Q9Y490 Q9Y490 674 685 TLN1 Talin-1 yes yes 2 0.00035907 140.11 By MS/MS 2 0 1 1 670570 670570 0 1649 2888 1700 4050 3393;3394 3393 2 226810 0 AVASCSEEAVQVLLK RVNAKDSKWLTPLHRAVASCSEEAVQVLLK AVASCSEEAVQVLLKHSADVNARDKNWQTP R A V L K H 3 0 0 0 1 1 2 0 0 0 2 1 0 0 0 2 0 0 0 3 0 0 15 0 1602.8287 O15084 O15084 81 95 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 7.6856E-11 229.29 By MS/MS 4 0 1 1 952150 952150 0 1650 158 1701 4051 3395 3395 1 89603 0 AVASDFYLR ______________________________ ______________________________ M A V L R Y 2 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 9 0 1040.5291 Q96A72 Q96A72 2 10 MAGOHB Protein mago nashi homolog 2 yes yes 2 0.00075673 141.39 By MS/MS 10 0 1 1 319870 319870 0 1651 2105 1702 4052 3396;3397 3397 2 17240 0 AVASEIFK CRSISPEWKQQLQQKAVASEIFKGKKDNYP KQQLQQKAVASEIFKGKKDNYPQSVPRLFI K A V F K G 2 0 0 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 8 0 863.47527 O00159 O00159 875 882 MYO1C Unconventional myosin-Ic yes yes 2 0.0075464 113.7 By MS/MS 3.5 0.5 1 1 2 1838800 1838800 0 1652 85 1703 4053;4054 3398 3398 1 168000 0 AVASQLDCNFLK LLYGPPGTGKTLLARAVASQLDCNFLKVVS LARAVASQLDCNFLKVVSSSIVDKYIGESA R A V L K V 2 0 1 1 1 1 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 12 0 1364.6758 P62333 P62333 186 197 PSMC6 26S protease regulatory subunit 10B yes yes 2 1.6022E-13 246.86 By MS/MS 7.5 0.5 1 1 2 15468000 15468000 0 1653 1159 1704 4055;4056 3399;3400 3399 2 235430 0 AVATGKMDENQFVAVTSTNAAK GVNGIEERMTVVWDKAVATGKMDENQFVAV DENQFVAVTSTNAAKIFNLYPRKGRIAVGS K A V A K I 5 0 2 1 0 1 1 1 0 0 0 2 1 1 0 1 3 0 0 3 0 0 22 1 2252.1107 Q14194;Q14195 Q14194 369 390 CRMP1;DPYSL3 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 3 yes no 3 0.0093559 70.837 By MS/MS By MS/MS 5.29 2.81 2 2 1 2 3 4 3438900 3021300 417540 1654 1430 1705 4057;4058;4059;4060;4061;4062;4063 3401;3402;3403;3404;3405 3404 824 5 57840 503890 AVAVDLGNR TQLQVRALWSSAGSRAVAVDLGNRKLEISS SSAGSRAVAVDLGNRKLEISSGKLARFADG R A V N R K 2 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 913.49813 Q8TCS8 Q8TCS8 46 54 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.034969 82.452 By MS/MS 5 0 1 1 1617100 1617100 0 1655 1992 1706 4064 3406 3406 1 16218 0 AVAVESIHR LLVKFLDADKPQWLRAVAVESIHRFCVQPQ KPQWLRAVAVESIHRFCVQPQLLRSFCQSY R A V H R F 2 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 2 0 0 9 0 980.54033 Q7Z3U7 Q7Z3U7 353 361 MON2 Protein MON2 homolog yes yes 2 0.013499 94.302 By MS/MS 2 0 1 1 570080 570080 0 1656 1787 1707 4065 3407 3407 1 192820 0 AVAVGRPSNEELR ______________________________ ______________________________ M A V L R N 2 2 1 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 13 1 1396.7423 Q9NVA2 Q9NVA2 2 14 SEPT11 Septin-11 yes yes 2 0.0012136 121.6 By MS/MS By matching 6.33 0.471 2 1 2 1 12607000 12523000 83415 1657 2592 1708 4066;4067;4068 3408 3408 1 90853 85477 AVAVVVDPIQSVK VDINTQQSFEALSERAVAVVVDPIQSVKGK ERAVAVVVDPIQSVKGKVVIDAFRLINANM R A V V K G 2 0 0 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 5 0 0 13 0 1323.7762 O00487 O00487 140 152 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 2 0.00079518 129.82 By MS/MS 8 0.816 1 1 1 3 17473000 17473000 0 1658 110 1709 4069;4070;4071 3409;3410 3410 2 261950 0 AVCEADQSHGGPR NEGQASSVAEQDFWRAVCEADQSHGGPRSL WRAVCEADQSHGGPRSLSDIKGAADEIMLP R A V P R S 2 1 0 1 1 1 1 2 1 0 0 0 0 0 1 1 0 0 0 1 0 0 13 0 1382.5997 O14545 O14545 265 277 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 2.3149E-11 236.69 By MS/MS 5 0 2 2 1604800 1604800 0 1659 125 1710 4072;4073 3411;3412 3412 2 16095 0 AVCMLSNTTAIAEAWAR PPTVVPGGDLAKVQRAVCMLSNTTAIAEAW CMLSNTTAIAEAWARLDHKFDLMYAKRAFV R A V A R L 5 1 1 0 1 0 1 0 0 1 1 0 1 0 0 1 2 1 0 1 0 0 17 0 1863.8971 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65 Q71U36 374 390 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain no no 2 3.1217E-33 315.41 By MS/MS 6 0 2 2 9366200 9366200 0 1660 1210;1751;1211 1711;1712 4074;4075 3413;3414;3415 3413 702 3 64385 0 AVCMLSNTTAVAEAWAR PPTVVPGGDLAKVQRAVCMLSNTTAVAEAW CMLSNTTAVAEAWARLDHKFDLMYAKRAFV R A V A R L 5 1 1 0 1 0 1 0 0 0 1 0 1 0 0 1 2 1 0 2 0 0 17 0 1849.8815 Q9BQE3 Q9BQE3 374 390 TUBA1C Tubulin alpha-1C chain yes yes 2 3.0463E-44 320.48 By MS/MS 6 0 2 2 3318000 3318000 0 1661 2290 1713;1714 4076;4077 3416;3417;3418 3417 1066 3 22809 0 AVDDGVNTFK VLRGSTDNLMDDIERAVDDGVNTFKVLTRD DDIERAVDDGVNTFKVLTRDKRLVPGGGAT R A V F K V 1 0 1 2 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1064.5138 P50990 P50990 391 400 CCT8 T-complex protein 1 subunit theta yes yes 2 8.5458E-09 202.44 By MS/MS By MS/MS 5.33 2.83 1 1 1 1 3 1 1 8 1 47738000 47522000 215280 1662 984 1715 4078;4079;4080;4081;4082;4083;4084;4085;4086 3419;3420;3421;3422;3423;3424 3422 6 485960 220600 AVDFAER FRAHVKHRKGAARLRAVDFAERHGYIKGIV RKGAARLRAVDFAERHGYIKGIVKDIIHDP R A V E R H 2 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 7 0 806.39227 P62917 P62917 31 37 RPL8 60S ribosomal protein L8 yes yes 2 0.039197 97.798 By MS/MS By matching 8 0 2 1 1 2078200 2015600 62547 1663 1187 1716 4087;4088 3425 3425 1 25447 84404 AVDGIEVYSTK RNPSLLLGKRSLPGRAVDGIEVYSTKVNCK LPGRAVDGIEVYSTKVNCKVTSRFAHNVVT R A V T K V 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 1 1 0 1 2 0 0 11 0 1180.5976 CON__Q0V8M9 CON__Q0V8M9 39 49 yes yes 2 0.0048845 104.22 By MS/MS 9 0 1 1 182930 182930 0 + 1664 58 1717 4089 3426 3426 1 3600.2 0 AVDPTSGQLYGLAR LGRVKGRTGLRVVVKAVDPTSGQLYGLARE KAVDPTSGQLYGLARELSDEIQVQVFEKLQ K A V A R E 2 1 0 1 0 1 0 2 0 0 2 0 0 0 1 1 1 0 1 1 0 0 14 0 1446.7467 Q8TEM1 Q8TEM1 1259 1272 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.00044366 148.78 By MS/MS 1.5 0.5 1 1 2 873530 873530 0 1665 2001 1718 4090;4091 3427;3428 3428 2 275120 0 AVDSFETQR VQHVVLQALFYLLDRAVDSFETQRNGLVFI FYLLDRAVDSFETQRNGLVFIYDMCGSNYA R A V Q R N 1 1 0 1 0 1 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 9 0 1051.4934 P43378 P43378 138 146 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 2 0.0048559 109.48 By MS/MS 6 0 1 1 474080 474080 0 1666 898 1719 4092 3429 3429 1 3259 0 AVDSLLNFETVK FRRAMNTQENATRARAVDSLLNFETVKYYN RARAVDSLLNFETVKYYNAESYEVERYREA R A V V K Y 1 0 1 1 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 2 0 0 12 0 1334.7082 Q9NP58 Q9NP58 453 464 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes yes 2 0.00099668 125.23 By MS/MS 1.5 0.5 1 1 2 102720 102720 0 1667 2522 1720 4093;4094 3430;3431 3430 2 28514 0 AVDSLVPIGR IPRISVREPMQTGIKAVDSLVPIGRGQREL QTGIKAVDSLVPIGRGQRELIIGDRQTGKT K A V G R G 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 10 0 1025.5869 P25705 P25705 195 204 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.343E-05 172.21 By MS/MS By MS/MS 7.1 1.37 5 2 1 1 1 8 2 118220000 116390000 1827000 1668 723 1721 4095;4096;4097;4098;4099;4100;4101;4102;4103;4104 3432;3433;3434;3435;3436;3437;3438;3439;3440 3435 9 897400 1872200 AVDSQILPK KEKYEITEQRKIDQKAVDSQILPKIKAIPQ RKIDQKAVDSQILPKIKAIPQLQGYLRSVF K A V P K I 1 0 0 1 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 9 0 969.5495 Q02878 Q02878 252 260 RPL6 60S ribosomal protein L6 yes yes 2 0.016146 90.601 By MS/MS 7 0 1 1 3825700 3825700 0 1669 1281 1722 4105 3441 3441 1 60057 0 AVDTLAYLSDGDAR SSNSSSEPAMFIEDKAVDTLAYLSDGDARA KAVDTLAYLSDGDARAGLNGLQLAVLARLS K A V A R A 3 1 0 3 0 0 0 1 0 0 2 0 0 0 0 1 1 0 1 1 0 0 14 0 1465.7049 Q96S55 Q96S55 428 441 WRNIP1 ATPase WRNIP1 yes yes 2 0.00048678 182.92 By MS/MS 5 0 1 1 1797500 1797500 0 1670 2231 1723 4106 3442 3442 1 18028 0 AVEAVVNDTSGENK AAAKEICQAIGKQMKAVEAVVNDTSGENKS KAVEAVVNDTSGENKSGAADIAASQHVMVC K A V N K S 2 0 2 1 0 0 2 1 0 0 0 1 0 0 0 1 1 0 0 3 0 0 14 0 1431.6842 Q9P2D3 Q9P2D3 391 404 HEATR5B HEAT repeat-containing protein 5B yes yes 2 3.2171E-07 209.67 By MS/MS 2 0 1 1 310260 310260 0 1671 2681 1724 4107 3443 3443 1 104940 0 AVEDDVFIPLYPK SRQDLLKSIVSRMKKAVEDDVFIPLYPKSA KKAVEDDVFIPLYPKSAVENKTSPHSKFQE K A V P K S 1 0 0 2 0 0 1 0 0 1 1 1 0 1 2 0 0 0 1 2 0 0 13 0 1504.7813 P16383 P16383 617 629 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 2 0.00028979 180.36 By MS/MS 4.5 0.5 1 1 2 819410 819410 0 1672 632 1725 4108;4109 3444;3445 3444 2 62573 0 AVEDEATKGTR KVMVTNVTSLLKTVKAVEDEATKGTRALEA KTVKAVEDEATKGTRALEATTEHIRQELAV K A V T R A 2 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 1 0 0 11 1 1175.5782 Q9Y490 Q9Y490 2134 2144 TLN1 Talin-1 yes yes 2 0.00043327 160.53 By MS/MS 2 0 1 1 0 0 0 1673 2888 1726 4110 3446 3446 1 0 0 AVEDFLR CSVNATPQQMPQTEKAVEDFLRSIGRSKKE QQMPQTEKAVEDFLRSIGRSKKERRPVRPH K A V L R S 1 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 848.43922 Q5JRX3 Q5JRX3 795 801 PITRM1 Presequence protease, mitochondrial yes yes 2 0.047025 91.906 By MS/MS 4 0 1 1 585340 585340 0 1674 1607 1727 4111 3447 3447 1 55084 0 AVEDIHGLFSLSK LDSAISMELWQEAFKAVEDIHGLFSLSKKP FKAVEDIHGLFSLSKKPPKPQLMANYYNKV K A V S K K 1 0 0 1 0 0 1 1 1 1 2 1 0 1 0 2 0 0 0 1 0 0 13 0 1414.7456 Q14152 Q14152 252 264 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00020527 162.26 By MS/MS 3 0.816 1 1 1 3 1002700 1002700 0 1675 1422 1728 4112;4113;4114 3448 3448 1 104550 0 AVEDKNIGPLVK MMFGNDRSRFLEGKRAVEDKNIGPLVKTIM GKRAVEDKNIGPLVKTIMTRCIQCTRCIRF R A V V K T 1 0 1 1 0 0 1 1 0 1 1 2 0 0 1 0 0 0 0 2 0 0 12 1 1281.7293 P28331 P28331 159 170 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2;3 0.043871 92.239 By MS/MS 5 0 2 2 1198600 1198600 0 1676 753 1729 4115;4116 3449;3450 3450 2 12022 0 AVEELQSIIK ______________________________ ______________________________ M A V I K R 1 0 0 0 0 1 2 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1128.639 Q92990 Q92990 2 11 GLMN Glomulin yes yes 2 0.00065915 131.62 By MS/MS 6 0 1 1 97273 97273 0 1677 2084 1730 4117 3451 3451 1 668.68 0 AVEELQSIIKR ______________________________ ______________________________ M A V K R C 1 1 0 0 0 1 2 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 11 1 1284.7402 Q92990 Q92990 2 12 GLMN Glomulin yes yes 2 5.0932E-07 198.61 By MS/MS 5.5 0.5 1 1 2 5339500 5339500 0 1678 2084 1731 4118;4119 3452;3453 3453 2 37222 0 AVEENGEEAEPVR GFHPERDPSDLKKVKAVEENGEEAEPVRNG VKAVEENGEEAEPVRNGAESVSEGEGIDAN K A V V R N 2 1 1 0 0 0 5 1 0 0 0 0 0 0 1 0 0 0 0 2 0 0 13 0 1427.6529 O43432 O43432 566 578 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00011753 171.67 By MS/MS 2 0 1 1 360250 360250 0 1679 210 1732 4120 3454 3454 1 121850 0 AVEEQIEYLQK ENKKMADEDALRKIRAVEEQIEYLQKKLAM RKIRAVEEQIEYLQKKLAMAKQEEEALLSE R A V Q K K 1 0 0 0 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1348.6874 Q5VTR2 Q5VTR2 706 716 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.00012053 156.16 By MS/MS 3 0 1 1 579050 579050 0 1680 1648 1733 4121 3455 3455 1 10595 0 AVEFLASNESR IPPQSRRRMKRVWDRAVEFLASNESRIQTE VWDRAVEFLASNESRIQTESHRVAGEDMLV R A V S R I 2 1 1 0 0 0 2 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 Q8NC56 Q8NC56 464 474 LEMD2 LEM domain-containing protein 2 yes yes 2 2.5777E-05 158.47 By MS/MS 7 0.816 1 1 1 3 11052000 11052000 0 1681 1948 1734 4122;4123;4124 3456 3456 1 122620 0 AVEHINK RDNDKTRYMGKGVSKAVEHINKTIAPALVS YMGKGVSKAVEHINKTIAPALVSKKLNVTE K A V N K T 1 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 809.43955 P06733 P06733 65 71 ENO1 Alpha-enolase yes yes 2 0.0080711 143.02 By MS/MS 6 0 1 1 2180800 2180800 0 1682 500 1735 4125 3457 3457 1 14991 0 AVELFIR CLDFVFDNTEAIAQRAVELFIRHASLIRPL NTEAIAQRAVELFIRHASLIRPLGEGGKMR R A V I R H 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 846.49634 Q9UP83 Q9UP83 679 685 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.021288 111.28 By MS/MS 4.5 0.5 1 1 2 1461800 1461800 0 1683 2797 1736 4126;4127 3458 3458 1 92457 0 AVELLPDGTANLAK LSTAEREQALRLKSRAVELLPDGTANLAKL RAVELLPDGTANLAKLQLVVENSAQRVIHL R A V A K L 3 0 1 1 0 0 1 1 0 0 3 1 0 0 1 0 1 0 0 1 0 0 14 0 1410.7718 O60826 O60826 389 402 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.018744 85.924 By MS/MS 5 0 1 1 2524800 2524800 0 1684 280 1737 4128 3459 3459 1 25322 0 AVENSSTAIGIR FSPDGRVFQVEYAMKAVENSSTAIGIRCKD AMKAVENSSTAIGIRCKDGVVFGVEKLVLS K A V I R C 2 1 1 0 0 0 1 1 0 2 0 0 0 0 0 2 1 0 0 1 0 0 12 0 1216.6412 P25788 P25788 30 41 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.01719 91.313 By MS/MS 9 1 1 1 2 8801100 8801100 0 1685 726 1738 4129;4130 3460;3461 3460 2 124070 0 AVENYLIQMAR ARLSNLALVKPEKTKAVENYLIQMARYGQL EKTKAVENYLIQMARYGQLSEKVSEQGLIE K A V A R Y 2 1 1 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 11 0 1306.6704 O14737 O14737 69 79 PDCD5 Programmed cell death protein 5 yes yes 2 2.2577E-05 160.75 By MS/MS 10 0 1 1 1219800 1219800 0 1686 136 1739 4131 3462 3462 80 1 65744 0 AVEPALLQR VYELFLHFSSLHVLRAVEPALLQRYRAQTC SLHVLRAVEPALLQRYRAQTCSARLSEDLY R A V Q R Y 2 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 9 0 995.57638 Q8IZ52 Q8IZ52 722 730 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.051694 75.213 By MS/MS 3.5 0.5 1 1 2 654170 654170 0 1687 1890 1740 4132;4133 3463 3463 1 51247 0 AVESIQAEDESAK LLDGVVEKLSVLKRKAVESIQAEDESAKLC RKAVESIQAEDESAKLCKRRIEHLKEHSSD K A V A K L 3 0 0 1 0 1 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1375.6467 Q7L5Y9 Q7L5Y9 85 97 MAEA Macrophage erythroblast attacher yes yes 2 1.8388E-05 190.36 By MS/MS 7 0 1 1 1139400 1139400 0 1688 1767 1741 4134 3464 3464 1 17886 0 AVETPPLSSVNLLEGLSR KSCVAAFLDVVIGGRAVETPPLSSVNLLEG TPPLSSVNLLEGLSRTVVYITYSQLITLVN R A V S R T 1 1 1 0 0 0 2 1 0 0 4 0 0 0 2 3 1 0 0 2 0 0 18 0 1881.0207 Q14C86 Q14C86 387 404 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.002247 105.99 By MS/MS 4 0 1 1 78431 78431 0 1689 1466 1742 4135 3465 3465 1 7380.9 0 AVEYFQDNSPDSPELNKVK GRLEEYLGSMAKIQKAVEYFQDNSPDSPEL FQDNSPDSPELNKVKLLFERGKEALESEFR K A V V K L 1 0 2 2 0 1 2 0 0 0 1 2 0 1 2 2 0 0 1 2 0 0 19 1 2179.0433 Q9UPT5 Q9UPT5 122 140 EXOC7 Exocyst complex component 7 yes yes 3 0.015824 68.845 By MS/MS 5 0 1 1 2653700 2653700 0 1690 2801 1743 4136 3466 3466 1 26615 0 AVEYNALFK VSIYGSSIDVELQQRAVEYNALFKKYDHMR VELQQRAVEYNALFKKYDHMRSALLERMPV R A V F K K 2 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 9 0 1053.5495 O43747 O43747 563 571 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.049363 76.221 By MS/MS 4 0 1 1 874200 874200 0 1691 231 1744 4137 3467 3467 1 82268 0 AVFADLDLR ______________________________ ______________________________ M A V L R A 2 1 0 2 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1018.5447 P78346 P78346 2 10 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.0064721 107.9 By MS/MS 8 0 1 1 115850 115850 0 1692 1220 1745 4138 3468 3468 1 1462.5 0 AVFDETYPDPVR QDCPLAAAKAIQGLRAVFDETYPDPVRVVS GLRAVFDETYPDPVRVVSIGVPVSELLDDP R A V V R V 1 1 0 2 0 0 1 0 0 0 0 0 0 1 2 0 1 0 1 2 0 0 12 0 1407.667 P49588 P49588 684 695 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0010713 130.98 By MS/MS 5 0.816 1 1 1 3 4603900 4603900 0 1693 951 1746 4139;4140;4141 3469;3470 3469 2 341110 0 AVFLVPK LSPTNDLMVIAREQKAVFLVPKWKYSDKGK MVIAREQKAVFLVPKWKYSDKGKEEMQFAV K A V P K W 1 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 7 0 772.48471 Q9H2M9 Q9H2M9 97 103 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.019975 112.27 By MS/MS 3 0 1 1 313390 313390 0 1694 2431 1747 4142 3471 3471 1 5734.1 0 AVFPSIVGR SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV GDDAPRAVFPSIVGRPRHQGVMVGMGQKDS R A V G R P 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 9 0 944.54435 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P63261 P63261 29 37 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0057574 107.9 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 14941000 14876000 64703 1695 1095;1203 1748 4143;4144;4145;4146;4147 3472;3473;3474 3472 3 238870 116530 AVFPSIVGRPR SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV DAPRAVFPSIVGRPRHQGVMVGMGQKDSYV R A V P R H 1 2 0 0 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 2 0 0 11 1 1197.6982 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P63261 P63261 29 39 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0069067 113.66 By MS/MS 7.33 0.471 2 1 3 19331000 19331000 0 1696 1095;1203 1749 4148;4149;4150 3475;3476 3475 2 302250 0 AVFQANQENLPILK ATWLALSRIAGLCNRAVFQANQENLPILKR RAVFQANQENLPILKRAVAGDASESALLKC R A V L K R 2 0 2 0 0 2 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 14 0 1583.8671 P05023 P05023 431 444 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 2.505E-11 254.07 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 14045000 14045000 0 1697 481 1750 4151;4152;4153;4154;4155;4156 3477;3478;3479;3480;3481;3482;3483;3484 3481 7 1605800 0 AVFQANQENLPILKR ATWLALSRIAGLCNRAVFQANQENLPILKR AVFQANQENLPILKRAVAGDASESALLKCI R A V K R A 2 1 2 0 0 2 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 15 1 1739.9683 P05023 P05023 431 445 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0014911 134.13 By MS/MS 1.5 0.5 1 1 2 253490 253490 0 1698 481 1751 4157;4158 3485 3485 1 79250 0 AVFQESIR SQMVEMEEQVVEDHRAVFQESIRWLEDEKA QVVEDHRAVFQESIRWLEDEKALLEMTEEV R A V I R W 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 8 0 948.50288 O00139 O00139 630 637 KIF2A Kinesin-like protein KIF2A yes yes 2 0.016227 103.83 By MS/MS 4 0 1 1 1073800 1073800 0 1699 82 1752 4159 3486 3486 1 101050 0 AVFVDLEPTVIDEIR TTFFCETGAGKHVPRAVFVDLEPTVIDEIR AVFVDLEPTVIDEIRNGPYRQLFHPEQLIT R A V I R N 1 1 0 2 0 0 2 0 0 2 1 0 0 1 1 0 1 0 0 3 0 0 15 0 1714.9142 P68366 P68366 65 79 TUBA4A Tubulin alpha-4A chain yes yes 2 0.0070424 111.91 By MS/MS 6 0 1 1 1427100 1427100 0 1700 1211 1753 4160 3487 3487 1 9810.3 0 AVFVDLEPTVIDEVR NTFFSETGAGKHVPRAVFVDLEPTVIDEVR AVFVDLEPTVIDEVRTGTYRQLFHPEQLIT R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;Q71U36;Q9BQE3 Q9BQE3 65 79 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2;3 2.2165E-30 278.51 By MS/MS By MS/MS 6.36 2.08 2 1 1 1 3 18 5 4 4 3 34 8 771650000 766830000 4815500 1701 1210;1751;2290 1754 4161;4162;4163;4164;4165;4166;4167;4168;4169;4170;4171;4172;4173;4174;4175;4176;4177;4178;4179;4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201;4202 3488;3489;3490;3491;3492;3493;3494;3495;3496;3497;3498;3499;3500;3501;3502;3503;3504;3505;3506;3507;3508;3509;3510;3511;3512;3513;3514;3515;3516;3517;3518;3519;3520;3521;3522;3523;3524;3525;3526;3527;3528;3529;3530;3531;3532;3533;3534;3535;3536;3537;3538 3493 51 6119800 5041000 AVFVDLEPTVIDEVRTGTYR NTFFSETGAGKHVPRAVFVDLEPTVIDEVR LEPTVIDEVRTGTYRQLFHPEQLITGKEDA R A V Y R Q 1 2 0 2 0 0 2 1 0 1 1 0 0 1 1 0 3 0 1 4 0 0 20 1 2279.1798 P68363;Q71U36;Q9BQE3 Q9BQE3 65 84 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2;3 0.0041092 91.202 By MS/MS 7.2 1.17 2 1 1 1 5 36521000 36521000 0 1702 1210;1751;2290 1755 4203;4204;4205;4206;4207 3539;3540;3541;3542 3540 4 256670 0 AVGDGIVLCK RHVIPMNPNTDDLFKAVGDGIVLCKMINLS DDLFKAVGDGIVLCKMINLSVPDTIDERAI K A V C K M 1 0 0 1 1 0 0 2 0 1 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1030.5481 P13797 P13797 159 168 PLS3 Plastin-3 yes yes 2 0.048864 72.879 By MS/MS 5 0 1 1 1281800 1281800 0 1703 605 1756 4208 3543 3543 1 12856 0 AVGFLSVPK EMDKENNDGSSEIGKAVGFLSVPKSLSSDS SSEIGKAVGFLSVPKSLSSDSTLLLFKDSS K A V P K S 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 9 0 916.5382 Q9HAW4 Q9HAW4 709 717 CLSPN Claspin yes yes 2 0.013187 96.492 By MS/MS 2 0 1 1 78837 78837 0 1704 2497 1757 4209 3544 3544 1 26666 0 AVGHPFVIQLGR KQLGSILKTNVRACKAVGHPFVIQLGRIYL ACKAVGHPFVIQLGRIYLDMLNVYKCLSEN K A V G R I 1 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 2 0 0 12 0 1292.7353 O14980 O14980 701 712 XPO1 Exportin-1 yes yes 3 0.0060592 97.456 By MS/MS 4 0 1 1 558880 558880 0 1705 153 1758 4210 3545 3545 1 52594 0 AVGTPGGGGGGAVPGISAMSR RGDKEAPPPVLLTPKAVGTPGGGGGGAVPG GGGGGAVPGISAMSRGDLSQRAKDLSKRSF K A V S R G 3 1 0 0 0 0 0 8 0 1 0 0 1 0 2 2 1 0 0 2 0 0 21 0 1754.8734 P48634 P48634 1350 1370 PRRC2A Protein PRRC2A yes yes 2 1.7507E-05 152.34 By MS/MS 1.67 0.471 1 2 3 1332100 1332100 0 1706 938 1759;1760 4211;4212;4213 3546;3547 3547 491 2 439980 0 AVGTQTLSGAGLLK DPDVREFLEKEELPRAVGTQTLSGAGLLKM RAVGTQTLSGAGLLKMFNKATDAVSKMTIK R A V L K M 2 0 0 0 0 1 0 3 0 0 3 1 0 0 0 1 2 0 0 1 0 0 14 0 1314.7507 Q13596 Q13596 273 286 SNX1 Sorting nexin-1 yes yes 2 0.00044207 145.09 By MS/MS 5 0 1 1 1087400 1087400 0 1707 1401 1761 4214 3548 3548 1 10906 0 AVGVQNYLEEAAER GTDFNGVAAVRGTQRAVGVQNYLEEAAERL RAVGVQNYLEEAAERLNSVEPVRFTISSRT R A V E R L 3 1 1 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 14 0 1547.758 Q8N0Z8 Q8N0Z8 37 50 PUSL1 tRNA pseudouridine synthase-like 1 yes yes 2 0.0011525 122.46 By MS/MS 8 0 1 1 304950 304950 0 1708 1898 1762 4215 3549 3549 1 3850 0 AVHEDIVAVELLPK ENKEIILQGLKHLNRAVHEDIVAVELLPKS RAVHEDIVAVELLPKSQWVAPSSVVLHDEG R A V P K S 2 0 0 1 0 0 2 0 1 1 2 1 0 0 1 0 0 0 0 3 0 0 14 0 1531.861 Q9Y2L1 Q9Y2L1 286 299 DIS3 Exosome complex exonuclease RRP44 yes yes 2;3 5.9126E-05 184.88 By MS/MS 5 0.816 2 2 2 6 4229500 4229500 0 1709 2834 1763 4216;4217;4218;4219;4220;4221 3550;3551;3552 3551 3 273970 0 AVIELLEK VRGDAHECFVSPVAKAVIELLEKSGVNLDG FVSPVAKAVIELLEKSGVNLDGKKILVVGA K A V E K S 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 913.54843 Q6UB35 Q6UB35 206 213 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.017415 102.51 By MS/MS By matching 4.33 0.471 2 1 2 1 9557100 9457400 99693 1710 1728 1764 4222;4223;4224 3553 3553 1 846150 212410 AVIFDRFR GVVNSALYNVDAGHRAVIFDRFRGVQDIVV NVDAGHRAVIFDRFRGVQDIVVGEGTHFLI R A V F R G 1 2 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 8 1 1022.5661 P35232 P35232 36 43 PHB Prohibitin yes yes 2 0.037499 113.5 By MS/MS 8 0 1 1 34053000 34053000 0 1711 814 1765 4225 3554 3554 1 429910 0 AVIFEDCAVPVANR GKKEKKVGWNSQPTRAVIFEDCAVPVANRI RAVIFEDCAVPVANRIGSEGQGFLIAVRGL R A V N R I 3 1 1 1 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 3 0 0 14 0 1559.7766 Q9UKU7 Q9UKU7 245 258 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 0.00042553 158.05 By MS/MS 7 0 1 1 1969000 1969000 0 1712 2764 1766 4226 3555 3555 1 30910 0 AVIGIGIEEEDRK CDRAGSVATCQAVMRAVIGIGIEEEDRKHT MRAVIGIGIEEEDRKHTWMEDADSCVAHNA R A V R K H 1 1 0 1 0 0 3 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 13 1 1427.762 O94906 O94906 528 540 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.012561 107.55 By MS/MS 4 0 1 1 3359600 3359600 0 1713 376 1767 4227 3556 3556 1 316160 0 AVIPEAVVEVLDPK FWDDVYGFKMSCMKKAVIPEAVVEVLDPKT KAVIPEAVVEVLDPKTLISEPCGIKHIDCH K A V P K T 2 0 0 1 0 0 2 0 0 1 1 1 0 0 2 0 0 0 0 4 0 0 14 0 1477.8392 O60678 O60678 397 410 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.013531 90.685 By MS/MS 5.5 0.5 1 1 2 1349200 1349200 0 1714 269 1768 4228;4229 3557;3558;3559 3559 3 10542 0 AVIYNPATQADWTAK RTGLEDPERYLFVDRAVIYNPATQADWTAK AVIYNPATQADWTAKKLVWIPSERHGFEAA R A V A K K 4 0 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 1 1 1 0 0 15 0 1647.8257 P35580 P35580 19 33 MYH10 Myosin-10 yes yes 2 0.00049055 147.96 By MS/MS 2 0 1 1 130490 130490 0 1715 825 1769 4230 3560;3561 3560 2 44138 0 AVLAQLGCPIK LFPMFMGGLLSAHNRAVLAQLGCPIKNLDA AHNRAVLAQLGCPIKNLDALENAQAIKKKL R A V I K N 2 0 0 0 1 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1168.6638 Q86UT6 Q86UT6 637 647 NLRX1 NLR family member X1 yes yes 2 0.00087496 124.08 By MS/MS 4 0 1 1 1268400 1268400 0 1716 1825 1770 4231 3562;3563 3563 2 119370 0 AVLASTPR DPHGIQREDLILSLRAVLASTPRFAEFLLP DLILSLRAVLASTPRFAEFLLPLLIEKVDS R A V P R F 2 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 8 0 813.47085 Q96T76 Q96T76 247 254 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.015888 104.21 By MS/MS 4.5 0.5 1 1 2 1221800 1221800 0 1717 2240 1771 4232;4233 3564 3564 1 98888 0 AVLDALLASK YVISGQDQRKEEGMRAVLDALLASKQHWDR EEGMRAVLDALLASKQHWDRDLQVTLIPTF R A V S K Q 3 0 0 1 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 999.59645 Q66K74 Q66K74 991 1000 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.034147 79.986 By MS/MS 3 0 1 1 159960 159960 0 1718 1669 1772 4234 3565 3565 1 2926.7 0 AVLDALLEGK YVVSGNDPAAEEPSRAVLDALLEGKAQWGS EEPSRAVLDALLEGKAQWGSNMQVTLIPTH R A V G K A 2 0 0 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1027.5914 P78559;P46821 P46821 2400 2409 MAP1A;MAP1B Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2;Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 no no 2 0.0010479 128.27 By MS/MS 8 0 1 1 311240 311240 0 1719 1227;921 1773 4235 3566 3566 1 3929.4 0 AVLDSYEYFAVLAAK ILYKRLSVLVKGHDKAVLDSYEYFAVLAAK AVLDSYEYFAVLAAKELGISIKVHEPPRKI K A V A K E 4 0 0 1 0 0 1 0 0 0 2 1 0 1 0 1 0 0 2 2 0 0 15 0 1658.8556 P82664 P82664 86 100 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 2 0.00048311 163.78 By MS/MS 9.5 0.5 1 1 2 140360 140360 0 1720 1231 1774 4236;4237 3567 3567 1 4246.3 0 AVLEEGTDVVIK DGVFTDVAGPELQNKAVLEEGTDVVIKMLQ QNKAVLEEGTDVVIKMLQTAKNLLKEEKLV K A V I K M 1 0 0 1 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 3 0 0 12 0 1271.6973 Q9NSE4 Q9NSE4 434 445 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 3.2342E-05 172.98 By MS/MS 4.5 0.5 1 1 2 8305700 8305700 0 1721 2570 1775 4238;4239 3568 3568 1 732450 0 AVLEQFGFPLTGTEAR EGALTGKQPDGSAEKAVLEQFGFPLTGTEA VLEQFGFPLTGTEARCYTNHALSYDQAKRV K A V A R C 2 1 0 0 0 1 2 2 0 0 2 0 0 2 1 0 2 0 0 1 0 0 16 0 1734.8941 Q9Y2C4 Q9Y2C4 60 75 EXOG Nuclease EXOG, mitochondrial yes yes 2 0.00029582 137.73 By MS/MS 7 0 1 1 112640 112640 0 1722 2825 1776 4240 3569 3569 1 1768.2 0 AVLFCLSEDK VRKSSTPEEVKKRKKAVLFCLSEDKKNIIL KKRKKAVLFCLSEDKKNIILEEGKEILVGD K A V D K K 1 0 0 1 1 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1180.5798 P23528 P23528 35 44 CFL1 Cofilin-1 yes yes 2 0.022362 85.676 By MS/MS 9.5 0.5 1 1 2 211840 211840 0 1723 707 1777 4241;4242 3570 3570 1 7388.6 0 AVLFCLSEDKK VRKSSTPEEVKKRKKAVLFCLSEDKKNIIL KRKKAVLFCLSEDKKNIILEEGKEILVGDV K A V K K N 1 0 0 1 1 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 11 1 1308.6748 P23528 P23528 35 45 CFL1 Cofilin-1 yes yes 2 0.00092398 136.99 By MS/MS 9.5 0.5 1 1 2 940760 940760 0 1724 707 1778 4243;4244 3571;3572 3572 2 31563 0 AVLGANDPEK KPIDYYTETKILQERAVLGANDPEKNFLTT ILQERAVLGANDPEKNFLTTAIRPHGIFGP R A V E K N 2 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1012.5189 Q15738 Q15738 182 191 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.015379 89.047 By MS/MS 7.5 0.5 1 1 2 5791800 5791800 0 1725 1526 1779 4245;4246 3573 3573 1 90013 0 AVLGEVVLYSGAR VTRWFVTCVRQPEFRAVLGEVVLYSGARPL FRAVLGEVVLYSGARPLSHQPGPEAPALPK R A V A R P 2 1 0 0 0 0 1 2 0 0 2 0 0 0 0 1 0 0 1 3 0 0 13 0 1332.7402 P26640 P26640 202 214 VARS Valine--tRNA ligase yes yes 2 0.008 117.52 By MS/MS 3 0 1 1 58440 58440 0 1726 735 1780 4247 3574 3574 1 1069.3 0 AVLGSSPFLSEANAER VAKKSLRSEDPSGKKAVLGSSPFLSEANAE VLGSSPFLSEANAERIVRTLCKVRGAALKL K A V E R I 3 1 1 0 0 0 2 1 0 0 2 0 0 1 1 3 0 0 0 1 0 0 16 0 1646.8264 Q8NI60 Q8NI60 247 262 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 0.00026659 152.16 By MS/MS 7 0.816 1 1 1 3 6110700 6110700 0 1727 1972 1781 4248;4249;4250 3575 3575 1 48003 0 AVLGSVER KGQAGALERPVLIHRAVLGSVERLLGVLAE RPVLIHRAVLGSVERLLGVLAESCGGKWPL R A V E R L 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 829.46577 Q9BW92 Q9BW92 587 594 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.050063 82.452 By MS/MS 5 0 1 1 4745100 4745100 0 1728 2346 1782 4251 3576 3576 1 47591 0 AVLIAGQPGTGK GVVLEMIREGKIAGRAVLIAGQPGTGKTAI AGRAVLIAGQPGTGKTAIAMGMAQALGPDT R A V G K T 2 0 0 0 0 1 0 3 0 1 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1110.6397 Q9Y230 Q9Y230 72 83 RUVBL2 RuvB-like 2 yes yes 2 0.034279 77.662 By MS/MS 9 0 1 1 118610 118610 0 1729 2810 1783 4252 3577 3577 1 2334.3 0 AVLICLAQLGEPELR AIRHTPLPQQRHVSKAVLICLAQLGEPELR AVLICLAQLGEPELRDSRDELLASMMAGVK K A V L R D 2 1 0 0 1 1 2 1 0 1 4 0 0 0 1 0 0 0 0 1 0 0 15 0 1680.9233 Q9Y4R8 Q9Y4R8 363 377 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0004481 144.47 By MS/MS 4 0 1 1 92591 92591 0 1730 2900 1784 4253 3578 3578 1 8713.5 0 AVLIDKDQSPK SQACMRGHDFHEGVRAVLIDKDQSPKWKPA EGVRAVLIDKDQSPKWKPADLKEVTEEDLN R A V P K W 1 0 0 2 0 1 0 0 0 1 1 2 0 0 1 1 0 0 0 1 0 0 11 1 1212.6714 Q6NVY1 Q6NVY1 348 358 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 8.0332E-06 169.76 By MS/MS 7 0 1 1 1002700 1002700 0 1731 1691 1785 4254 3579 3579 1 15741 0 AVLLAGPPGTGK GVIVELIKSKKMAGRAVLLAGPPGTGKTAL AGRAVLLAGPPGTGKTALALAIAQELGSKV R A V G K T 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 0 1 0 0 1 0 0 12 0 1079.6339 Q9Y265 Q9Y265 65 76 RUVBL1 RuvB-like 1 yes yes 2 0.00074819 129.85 By MS/MS By matching 6.33 0.471 2 1 2 1 27386000 27323000 63018 1732 2815 1786 4255;4256;4257 3580 3580 1 196070 64576 AVLLDLEPR DVFFYQADDEHYIPRAVLLDLEPRVIHSIL EHYIPRAVLLDLEPRVIHSILNSPYAKLYN R A V P R V 1 1 0 1 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 9 0 1024.5917 P23258;Q9NRH3 P23258 64 72 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 0.0058888 107.66 By MS/MS 8 1.41 1 1 1 1 1 5 11347000 11347000 0 1733 701 1787 4258;4259;4260;4261;4262 3581;3582;3583;3584 3581 4 136270 0 AVLLEALGSPSEDVR EVGQVAGPGHQRELKAVLLEALGSPSEDVR AVLLEALGSPSEDVRAAASYALGRVGAGSL K A V V R A 2 1 0 1 0 0 2 1 0 0 3 0 0 0 1 2 0 0 0 2 0 0 15 0 1554.8253 O75155 O75155 864 878 CAND2 Cullin-associated NEDD8-dissociated protein 2 yes yes 2 6.0227E-05 190.53 By MS/MS 3.5 0.5 1 1 2 431210 431210 0 1734 301 1788 4263;4264 3585;3586 3586 2 28302 0 AVLLVGLCDSGK LVFWKLIRSRRSSQRAVLLVGLCDSGKTLL SQRAVLLVGLCDSGKTLLFVRLLTGLYRDT R A V G K T 1 0 0 1 1 0 0 2 0 0 3 1 0 0 0 1 0 0 0 2 0 0 12 0 1230.6642 Q9Y5M8 Q9Y5M8 66 77 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.0004421 135.55 By MS/MS 9 0.816 1 1 1 3 7682100 7682100 0 1735 2917 1789 4265;4266;4267 3587;3588;3589;3590;3591 3588 5 102900 0 AVLNPLCQVDYR PIQYEPVLCSRTTCRAVLNPLCQVDYRAKL TCRAVLNPLCQVDYRAKLWACNFCYQRNQF R A V Y R A 1 1 1 1 1 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 12 0 1446.7289 Q15436;Q15437 Q15436 68 79 SEC23A;SEC23B Protein transport protein Sec23A;Protein transport protein Sec23B no no 2 0.00011719 144.55 By MS/MS 4.5 0.5 1 1 2 4455300 4455300 0 1736 1513;1514 1790 4268;4269 3592;3593 3592 2 73916 0 AVLNPTPIKR LQQDGVKEVFAEAVRAVLNPTPIKRGRSCI AEAVRAVLNPTPIKRGRSCILL________ R A V K R G 1 1 1 0 0 0 0 0 0 1 1 1 0 0 2 0 1 0 0 1 0 0 10 1 1107.6764 P84095 P84095 175 184 RHOG Rho-related GTP-binding protein RhoG yes yes 2 0.044801 90.15 By MS/MS 9 0 1 1 937490 937490 0 1737 1246 1791 4270 3594 3594 1 18450 0 AVLQAAR AVITVPVFFNQAERRAVLQAARMAGLKVLQ FFNQAERRAVLQAARMAGLKVLQLINDNTA R A V A R M 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 727.43407 Q9Y4L1 Q9Y4L1 187 193 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.025983 107.74 By MS/MS 3.5 0.5 1 1 2 1095000 1095000 0 1738 2898 1792 4271;4272 3595 3595 1 70108 0 AVLQEFGR PLDLTDTGSHEAATKAVLQEFGRIDILVNN SHEAATKAVLQEFGRIDILVNNGGMSQRSL K A V G R I 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 918.49232 Q9Y394 Q9Y394 124 131 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 2 0.01829 101.54 By MS/MS 7.5 0.5 1 1 2 1850500 1850500 0 1739 2859 1793 4273;4274 3596 3596 1 27592 0 AVLSAEQLRDEEVHAGLGELLR LVSLGGKATTASQAKAVLSAEQLRDEEVHA LRDEEVHAGLGELLRSLSNSTARNVTWKLG K A V L R S 3 2 0 1 0 1 4 2 1 0 5 0 0 0 0 1 0 0 0 2 0 0 22 1 2404.271 P50454 P50454 95 116 SERPINH1 Serpin H1 yes yes 3 6.0637E-09 206.63 By MS/MS 6 0 1 1 1450700 1450700 0 1740 975 1794 4275 3597 3597 1 9972.7 0 AVLSCIAPSAK YATLIENDSNPEVRRAVLSCIAPSAKTLPK EVRRAVLSCIAPSAKTLPKIVGRTKDVKEA R A V A K T 3 0 0 0 1 0 0 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 11 0 1115.6009 Q9BPX3 Q9BPX3 198 208 NCAPG Condensin complex subunit 3 yes yes 2 0.0094198 92.239 By MS/MS 3.5 0.5 1 1 2 1457100 1457100 0 1741 2279 1795 4276;4277 3598 3598 1 86048 0 AVLVDLEPGTMDSVR NVYYNEATGGKYVPRAVLVDLEPGTMDSVR AVLVDLEPGTMDSVRSGPFGQIFRPDNFVF R A V V R S 1 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 3 0 0 15 0 1600.8131 P04350;P68371;Q3ZCM7 P68371 63 77 TUBB4A;TUBB4B;TUBB8 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain no no 2 3.4959E-07 213.38 By MS/MS By MS/MS 6.29 2.72 2 1 1 5 2 2 2 2 14 3 120210000 119820000 394710 1742 1212;472 1796;1797 4278;4279;4280;4281;4282;4283;4284;4285;4286;4287;4288;4289;4290;4291;4292;4293;4294 3599;3600;3601;3602;3603;3604;3605;3606;3607;3608;3609;3610;3611;3612;3613;3614;3615;3616;3617 3610 175 19 1110900 432480 AVMLLHTHTITSR DKSWCQEELSVAVKRAVMLLHTHTITSRVG KRAVMLLHTHTITSRVGKGEPGAAPLSAPA R A V S R V 1 1 0 0 0 0 0 0 2 1 2 0 1 0 0 1 3 0 0 1 0 0 13 0 1478.8028 Q92616 Q92616 950 962 GCN1L1 Translational activator GCN1 yes yes 3 0.014586 84.821 By MS/MS 2 0 1 1 697940 697940 0 1743 2064 1798 4295 3618 3618 994 1 236070 0 AVMSNLSAHGVK DGNQYVREAADDCAKAVMSNLSAHGVKLVL CAKAVMSNLSAHGVKLVLPSLLAALEEESW K A V V K L 2 0 1 0 0 0 0 1 1 0 1 1 1 0 0 2 0 0 0 2 0 0 12 0 1212.6285 Q92616 Q92616 1485 1496 GCN1L1 Translational activator GCN1 yes yes 2;3 0.0084257 93.561 By MS/MS 2.25 0.433 3 1 4 1416000 1416000 0 1744 2064 1799;1800 4296;4297;4298;4299 3619;3620;3621 3621 995 3 454890 0 AVNHANTAK CKVTSRFAHNVVTTRAVNHANTAKEVSFDV NVVTTRAVNHANTAKEVSFDVELPKTAFIT R A V A K E 3 0 2 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 924.47773 CON__Q0V8M9 CON__Q0V8M9 67 75 yes yes 2 0.013494 94.309 By MS/MS 9.5 0.5 1 1 2 91645 91645 0 + 1745 58 1801 4300;4301 3622 3622 1 2355.8 0 AVNPFLADVDK AFEALGTALKVVGEKAVNPFLADVDKLKLD VGEKAVNPFLADVDKLKLDKIKECSEKVEL K A V D K L 2 0 1 2 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 11 0 1187.6186 Q14008 Q14008 474 484 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0085771 94.465 By MS/MS 2.5 0.5 1 1 2 589240 589240 0 1746 1417 1802 4302;4303 3623 3623 1 175240 0 AVNSATGVPTV VAVLQAHQAKEAAQKAVNSATGVPTV____ AAQKAVNSATGVPTV_______________ K A V T V - 2 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 2 0 0 3 0 0 11 0 1014.5346 P11940;Q9H361 P11940 626 636 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.00036433 134.26 By MS/MS 5 0 1 1 3303200 3303200 0 1747 586 1803 4304 3624 3624 1 33130 0 AVNTQALSGAGILR DPDLRQFLESSELPRAVNTQALSGAGILRM RAVNTQALSGAGILRMVNKAADAVNKMTIK R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 3.6808E-07 207.34 By MS/MS 5 0 1 1 2606100 2606100 0 1748 274 1804 4305 3625 3625 1 26138 0 AVNVYSTSVTSDNLSR ______________________________ VNVYSTSVTSDNLSRHDMLAWINESLQLNL M A V S R H 1 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 2 0 1 3 0 0 16 0 1711.8377 Q15691 Q15691 2 17 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2 6.6628E-17 264.28 By MS/MS 8 0 1 1 1093100 1093100 0 1749 1524 1805 4306 3626 3626 1 13801 0 AVPLAGFGYGLPISR YMYSTAPRPRVETSRAVPLAGFGYGLPISR AVPLAGFGYGLPISRLYAQYFQGDLKLYSL R A V S R L 2 1 0 0 0 0 0 3 0 1 2 0 0 1 2 1 0 0 1 1 0 0 15 0 1516.8402 Q15118 Q15118 349 363 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.0020048 123.67 By MS/MS 7 0 1 1 238380 238380 0 1750 1489 1806 4307 3627 3627 1 3742.1 0 AVPLALALISVSNPR TFGHLLRYGEPTLRRAVPLALALISVSNPR AVPLALALISVSNPRLNILDTLSKFSHDAD R A V P R L 3 1 1 0 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 2 0 0 15 0 1519.9086 Q13200 Q13200 689 703 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0013978 138.71 By MS/MS 4 0 1 1 146800 146800 0 1751 1365 1807 4308 3628;3629 3629 2 13815 0 AVPVGGTTVSLFGK AQVALTIWDVYGPGKAVPVGGTTVSLFGKY KAVPVGGTTVSLFGKYGMFRQGMHDLKVWP K A V G K Y 1 0 0 0 0 0 0 3 0 0 1 1 0 1 1 1 2 0 0 3 0 0 14 0 1331.7449 Q8NEB9 Q8NEB9 119 132 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.009268 91.961 By MS/MS 4 0 1 1 807330 807330 0 1752 1961 1808 4309 3630 3630 1 75975 0 AVQADQER KQCKQCANKVLQHMKAVQADQERERQRRLE KVLQHMKAVQADQERERQRRLEVEREAEKK K A V E R E 2 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 915.44101 Q96AG4 Q96AG4 150 157 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.025399 93.649 By MS/MS 7 0 1 1 5662400 5662400 0 1753 2107 1809 4310 3631 3631 1 88890 0 AVQADQERER KQCKQCANKVLQHMKAVQADQERERQRRLE LQHMKAVQADQERERQRRLEVEREAEKKRE K A V E R Q 2 2 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 10 1 1200.5847 Q96AG4 Q96AG4 150 159 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.031214 102.62 By MS/MS 8 1 1 1 2 4608200 4608200 0 1754 2107 1810 4311;4312 3632;3633 3633 2 73536 0 AVQEDEVGVPGSNSADLLR HEGGENISASPLTSKAVQEDEVGVPGSNSA DEVGVPGSNSADLLRWTTATTMKVLSNTTT K A V L R W 2 1 1 2 0 1 2 2 0 0 2 0 0 0 1 2 0 0 0 3 0 0 19 0 1954.9596 A2RRP1 A2RRP1 1390 1408 NBAS Neuroblastoma-amplified sequence yes yes 2 0.0003193 131.86 By MS/MS 2 0.816 1 1 1 3 816980 816980 0 1755 11 1811 4313;4314;4315 3634 3634 1 208170 0 AVQELVHPVVDR AHPQLKQCVRQAIERAVQELVHPVVDRSIK IERAVQELVHPVVDRSIKIAMTTCEQIVRK R A V D R S 1 1 0 1 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 4 0 0 12 0 1360.7463 A5YKK6 A5YKK6 1400 1411 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.022913 81.625 By MS/MS 2 0 1 1 1228100 1228100 0 1756 19 1812 4316 3635 3635 1 415410 0 AVQELWLR EMCGRSPAHYAGYWKAVQELWLRLYQSNLV HYAGYWKAVQELWLRLYQSNLVLVSAINGA K A V L R L 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 8 0 1013.5658 P42126 P42126 127 134 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 2 0.019857 99.802 By MS/MS 8 0 1 1 503460 503460 0 1757 874 1813 4317 3636 3636 1 6356.1 0 AVQGAQQPSLYQIR SHFKRKFIIHRGKRKAVQGAQQPSLYQIRT KAVQGAQQPSLYQIRTNGSALCTRCIQINT K A V I R T 2 1 0 0 0 4 0 1 0 1 1 0 0 0 1 1 0 0 1 1 0 0 14 0 1557.8263 Q13045 Q13045 1047 1060 FLII Protein flightless-1 homolog yes yes 2 0.00042897 141.71 By MS/MS 3.5 0.5 1 1 2 428330 428330 0 1758 1348 1814 4318;4319 3637 3637 1 17194 0 AVQGFFTSNNATR LPSTSRRLNHYVLYKAVQGFFTSNNATRDF YKAVQGFFTSNNATRDFLLPFLEEPMDTEA K A V T R D 2 1 2 0 0 1 0 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 13 0 1411.6844 O43242 O43242 116 128 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00014399 168.83 By MS/MS By MS/MS 6 0 2 1 1 8496800 8428000 68803 1759 198 1815 4320;4321 3638;3639 3639 2 57936 70503 AVQISKK ______________________________ ______________________________ M A V K K R 1 0 0 0 0 1 0 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 7 1 772.48069 P23396 P23396 2 8 RPS3 40S ribosomal protein S3 yes yes 2 0.022742 126.28 By MS/MS By MS/MS 8.14 0.99 2 3 1 1 5 2 31358000 30946000 411220 1760 703 1816 4322;4323;4324;4325;4326;4327;4328 3640;3641;3642;3643 3642 4 451620 576180 AVQYLSSQDEK ICSEDIECSGLTIPKAVQYLSSQDEKYQAI TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ K A V E K Y 1 0 0 1 0 2 1 0 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1266.6092 Q13835 Q13835 250 260 PKP1 Plakophilin-1 yes yes 2 2.8341E-05 161.67 By MS/MS 3 0 1 1 584900 0 584900 1761 1410 1817 4329 3644 3644 1 0 74449 AVSDWLIASVEGR TANGFQMVTSGVQSKAVSDWLIASVEGRLT SKAVSDWLIASVEGRLTGLGGEDLPTIVIV K A V G R L 2 1 0 1 0 0 1 1 0 1 1 0 0 0 0 2 0 1 0 2 0 0 13 0 1401.7252 Q969V3 Q969V3 195 207 NCLN Nicalin yes yes 2 1.5519E-07 206.11 By MS/MS 6 0 1 1 941820 941820 0 1762 2096 1818 4330 3645 3645 1 6474.3 0 AVSEEQQPALK HPPKPAKPEKNRINKAVSEEQQPALKGKKG RINKAVSEEQQPALKGKKGKEEKSKGKAKP K A V L K G 2 0 0 0 0 2 2 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1198.6194 Q8NE71 Q8NE71 164 174 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 0.0035184 107.83 By MS/MS 4 0 1 1 533290 533290 0 1763 1960 1819 4331 3646 3646 1 50186 0 AVSGKEPR VTLEDIKEHVKQLEKAVSGKEPRFVLRALR HVKQLEKAVSGKEPRFVLRALRMLPSTSRR K A V P R F 1 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 8 1 842.46102 O43242 O43242 85 92 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.02964 120.87 By MS/MS 5.5 0.5 1 1 2 2646500 2646500 0 1764 198 1820 4332;4333 3647 3647 1 18669 0 AVSISTEPPTYLR SEVEEILDGNDEKYKAVSISTEPPTYLREQ YKAVSISTEPPTYLREQKAKRNSQWVPTLP K A V L R E 1 1 0 0 0 0 1 0 0 1 1 0 0 0 2 2 2 0 1 1 0 0 13 0 1432.7562 Q12824 Q12824 109 121 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 2 0.00042729 139.15 By MS/MS 7.5 0.5 1 1 2 10917000 10917000 0 1765 1330 1821 4334;4335 3648 3648 1 169740 0 AVSTGVKVPR ______________________________ ______________________________ M A V P R N 1 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 0 3 0 0 10 1 1012.6029 Q15819 Q15819 2 11 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 2 0.010022 93.598 By MS/MS 10 0 1 1 734560 734560 0 1766 1536 1822 4336 3649 3649 1 39590 0 AVSVTPIRDTK ______________________________ ______________________________ M A V T K W 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 0 2 0 0 11 1 1185.6717 Q9NR56 Q9NR56 2 12 MBNL1 Muscleblind-like protein 1 yes yes 2 4.1462E-06 178.55 By MS/MS 7 0 1 1 3495300 3495300 0 1767 2548 1823 4337 3650 3650 1 54870 0 AVTAFSSTETGSAEQGFK QALPVQAPANDSWRKAVTAFSSTETGSAEQ AFSSTETGSAEQGFKSSQGDSGVDLSAESR K A V F K S 3 0 0 0 0 1 2 2 0 0 0 1 0 2 0 3 3 0 0 1 0 0 18 0 1816.8479 Q5JSZ5 Q5JSZ5 1648 1665 PRRC2B Protein PRRC2B yes yes 2 1.4998E-24 283.05 By MS/MS 2 0 1 1 422450 422450 0 1768 1609 1824 4338 3651 3651 1 142890 0 AVTEGAQAVEEPSIC DSISRASQTMAKCVKAVTEGAQAVEEPSIC AVTEGAQAVEEPSIC_______________ K A V I C - 3 0 0 0 1 1 3 1 0 1 0 0 0 0 1 1 1 0 0 2 0 0 15 0 1559.7137 P28331 P28331 713 727 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.00056083 160.86 By MS/MS 5 0 1 1 1229800 1229800 0 1769 753 1825 4339 3652 3652 1 12334 0 AVTELNEPLSNEDR AEQAERYDDMASAMKAVTELNEPLSNEDRN KAVTELNEPLSNEDRNLLSVAYKNVVGARR K A V D R N 1 1 2 1 0 0 3 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1585.7584 Q04917 Q04917 29 42 YWHAH 14-3-3 protein eta yes yes 2 2.8207E-07 211.67 By MS/MS 8 0 1 1 1190500 1190500 0 1770 1294 1826 4340 3653 3653 1 15030 0 AVTEQGAELSNEER AEQAERYDDMATCMKAVTEQGAELSNEERN KAVTEQGAELSNEERNLLSVAYKNVVGGRR K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 P27348 P27348 28 41 YWHAQ 14-3-3 protein theta yes yes 2 3.8433E-09 223.36 By MS/MS By MS/MS 8.67 0.943 2 1 2 1 5867000 5815500 51505 1771 739 1827 4341;4342;4343 3654;3655;3656;3657 3654 4 76310 69503 AVTEQGHELSNEER AEQAERYDDMAAAMKAVTEQGHELSNEERN KAVTEQGHELSNEERNLLSVAYKNVVGARR K A V E R N 1 1 1 0 0 1 4 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1597.7332 P31946 P31946 30 43 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2;3 1.8878E-16 237.41 By MS/MS By matching 8 0 3 2 1 4537300 4465300 71995 1772 793 1828 4344;4345;4346 3658;3659 3659 2 56374 97154 AVTHTSPEDVSFAESR FLLKGRLQQVLTGLRAVTHTSPEDVSFAES VTHTSPEDVSFAESRRDGLKAIARICQTVG R A V S R R 2 1 0 1 0 0 2 0 1 0 0 0 0 1 1 3 2 0 0 2 0 0 16 0 1731.8064 Q9BTW9 Q9BTW9 800 815 TBCD Tubulin-specific chaperone D yes yes 3 0.0068656 92.265 By MS/MS 3 0 1 1 634920 634920 0 1773 2319 1829 4347 3660 3660 1 11617 0 AVTIFIR TKDKMLVIEQCKNSRAVTIFIRGGNKMIIE IEQCKNSRAVTIFIRGGNKMIIEEAKRSLH R A V I R G 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 7 0 818.50142 P48643 P48643 382 388 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0093422 137.83 By MS/MS 6.5 1.12 1 1 1 1 4 13680000 13680000 0 1774 940 1830 4348;4349;4350;4351 3661;3662 3662 2 108220 0 AVTLDKDAYYR ______________________________ ______________________________ M A V Y R R 2 1 0 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 2 1 0 0 11 1 1313.6616 Q9Y5B9 Q9Y5B9 2 12 SUPT16H FACT complex subunit SPT16 yes yes 2 4.7273E-09 205.18 By MS/MS 1.5 0.5 1 1 2 1958400 1958400 0 1775 2909 1831 4352;4353 3663;3664 3664 2 566200 0 AVTLDKDAYYRR ______________________________ ______________________________ M A V R R V 2 2 0 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 2 1 0 0 12 2 1469.7627 Q9Y5B9 Q9Y5B9 2 13 SUPT16H FACT complex subunit SPT16 yes yes 3 0.0018034 100.69 By MS/MS 2 0.816 1 1 1 3 2111100 2111100 0 1776 2909 1832 4354;4355;4356 3665;3666;3667;3668 3666 4 381980 0 AVTPVPTKTEEVSNLK QHYQKETESAPGSPRAVTPVPTKTEEVSNL VTPVPTKTEEVSNLKTLPKGLSASLPDLDS R A V L K T 1 0 1 0 0 0 2 0 0 0 1 2 0 0 2 1 3 0 0 3 0 0 16 1 1711.9356 Q6PKG0 Q6PKG0 524 539 LARP1 La-related protein 1 yes yes 2 0.0020523 129.17 By MS/MS 3.5 0.5 1 1 2 740730 740730 0 1777 1722 1833 4357;4358 3669 3669 1 26582 0 AVTQALNR PGDPESQQRLAQVAKAVTQALNRCVSCLPG RLAQVAKAVTQALNRCVSCLPGQRDVDNAL K A V N R C 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 871.48756 Q9Y490 Q9Y490 1191 1198 TLN1 Talin-1 yes yes 2 0.015054 105.14 By MS/MS 2 0 1 1 1532000 1532000 0 1778 2888 1834 4359 3670 3670 1 518180 0 AVVAQAVR VWLEAARLQPGDTAKAVVAQAVRHLPQSVR QPGDTAKAVVAQAVRHLPQSVRIYIRAAEL K A V V R H 3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 8 0 812.48684 O94906 O94906 360 367 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.00202 143.02 By MS/MS 4.5 0.5 1 1 2 2391700 2391700 0 1779 376 1835 4360;4361 3671 3671 1 202350 0 AVVGVVAGGGR KLPSGSKKVISSANRAVVGVVAGGGRIDKP SANRAVVGVVAGGGRIDKPILKAGRAYHKY R A V G R I 2 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 11 0 940.54541 P62917 P62917 164 174 RPL8 60S ribosomal protein L8 yes yes 2 6.6889E-06 176.29 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 12436000 12226000 209580 1780 1187 1836 4362;4363;4364 3672;3673 3673 2 158680 282820 AVVIVDDR ELLEEAFSQFGPIERAVVIVDDRGRSTGKG QFGPIERAVVIVDDRGRSTGKGIVEFASKP R A V D R G 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 885.49198 P23246;Q15233 P23246 400 407 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 2 0.018484 101.33 By MS/MS 6 0 1 1 2894200 2894200 0 1781 700;1496 1837 4365 3674 3674 1 19896 0 AVVIVDDRGR ELLEEAFSQFGPIERAVVIVDDRGRSTGKG GPIERAVVIVDDRGRSTGKGIVEFASKPAA R A V G R S 1 2 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 3 0 0 10 1 1098.6146 P23246;Q15233 P23246 400 409 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 2 0.0034582 129.42 By MS/MS 4 0 1 1 728130 728130 0 1782 700;1496 1838 4366 3675 3675 1 68522 0 AVVQSPQVTEVL ETLLPFAEAEAFLKKAVVQSPQVTEVL___ LKKAVVQSPQVTEVL_______________ K A V V L - 1 0 0 0 0 2 1 0 0 0 1 0 0 0 1 1 1 0 0 4 0 0 12 0 1268.6976 Q3KQU3 Q3KQU3 830 841 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.004452 105.17 By MS/MS 3.5 0.5 1 1 2 877900 877900 0 1783 1575 1839 4367;4368 3676 3676 1 42484 0 AVVQVFEGTSGIDAK GTKRSGQVLEVSGSKAVVQVFEGTSGIDAK AVVQVFEGTSGIDAKKTSCEFTGDILRTPV K A V A K K 2 0 0 1 0 1 1 2 0 1 0 1 0 1 0 1 1 0 0 3 0 0 15 0 1519.7882 P21281 P21281 94 108 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 7.4622E-06 119.25 By MS/MS 6 0 1 1 5961900 5961900 0 1784 675 1840 4369 3677 3677 0 40983 0 AVVVNAAQLASYSQSK GVLTLWRGCIPTMARAVVVNAAQLASYSQS VVVNAAQLASYSQSKQFLLDSGYFSDNILC R A V S K Q 4 0 1 0 0 2 0 0 0 0 1 1 0 0 0 3 0 0 1 3 0 0 16 0 1634.8628 Q02978 Q02978 191 206 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 4.782E-57 358.67 By MS/MS By MS/MS 6.4 3.01 1 1 1 1 4 1 1 9 1 98748000 98675000 72800 1785 1284 1841 4370;4371;4372;4373;4374;4375;4376;4377;4378;4379 3678;3679;3680;3681;3682;3683;3684;3685;3686 3685 9 1446400 98239 AVYCIIGR HYRRALRNNTDPYKRAVYCIIGRCDVTDNQ NTDPYKRAVYCIIGRCDVTDNQSEVADKTE R A V G R C 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 1 1 0 0 8 0 950.50077 Q8N1F7 Q8N1F7 389 396 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.00169 146.21 By MS/MS 4 0 1 1 1120600 1120600 0 1786 1903 1842 4380 3687 3687 1 105460 0 AVYSTNCPVWEEAFR PMVQLSIQDVTQESKAVYSTNCPVWEEAFR AVYSTNCPVWEEAFRFFLQDPQSQELDVQV K A V F R F 2 1 1 0 1 0 2 0 0 0 0 0 0 1 1 1 1 1 1 2 0 0 15 0 1827.825 Q9BSJ8 Q9BSJ8 516 530 ESYT1 Extended synaptotagmin-1 yes yes 2 5.8735E-05 190.85 By MS/MS 4.5 0.5 1 1 2 447510 447510 0 1787 2308 1843 4381;4382 3688;3689;3690 3690 3 21768 0 AVYTLTSLYR QTTYALIEAITEYTKAVYTLTSLYRQYTSL TEYTKAVYTLTSLYRQYTSLLGKMNSEEED K A V Y R Q 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 1 2 0 2 1 0 0 10 0 1185.6394 Q9NR28 Q9NR28 106 115 DIABLO Diablo homolog, mitochondrial yes yes 2 0.045094 82.645 By MS/MS 9 0 1 1 0 0 0 1788 2544 1844 4383 3691 3691 1 0 0 AVYTQDCPLAAAK KKAEEIANEMIEAAKAVYTQDCPLAAAKAI AKAVYTQDCPLAAAKAIQGLRAVFDETYPD K A V A K A 4 0 0 1 1 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 13 0 1406.6864 P49588 P49588 665 677 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.00010869 172.61 By MS/MS 4.5 0.5 1 1 2 4050300 4050300 0 1789 951 1845 4384;4385 3692 3692 1 309080 0 AWDQEAEGAGPELGLR AGNLKPVWASRGCPRAWDQEAEGAGPELGL WDQEAEGAGPELGLRVARTKALWLPMGD__ R A W L R V 3 1 0 1 0 1 3 3 0 0 2 0 0 0 1 0 0 1 0 0 0 0 16 0 1697.8009 Q8IZ83 Q8IZ83 774 789 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 1.4732E-11 244.71 By MS/MS 5 0 1 1 941330 941330 0 1790 1892 1846 4386 3693 3693 1 9441.1 0 AWEVDTCR ADDRQVKIWRMNESKAWEVDTCRGHYNNVS WRMNESKAWEVDTCRGHYNNVSCAVFHPRQ K A W C R G 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 8 0 1035.4444 P53621 P53621 239 246 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.018237 101.6 By MS/MS 2 0.816 1 1 1 3 1697500 1697500 0 1791 1034 1847 4387;4388;4389 3694 3694 1 114550 0 AWGILTFK RVRPDYTAQNLDHGKAWGILTFKGKTESEA QNLDHGKAWGILTFKGKTESEAREIEHVMY K A W F K G 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 1 0 0 0 0 8 0 934.52764 P82930 P82930 114 121 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.018129 101.33 By MS/MS 8 0 1 1 553930 553930 0 1792 1237 1848 4390 3695 3695 1 6993.3 0 AWGPGLEGGVVGK FEVKVGTECGNQKVRAWGPGLEGGVVGKSA VRAWGPGLEGGVVGKSADFVVEAIGDDVGT R A W G K S 1 0 0 0 0 0 1 5 0 0 1 1 0 0 1 0 0 1 0 2 0 0 13 0 1225.6455 P21333 P21333 581 593 FLNA Filamin-A yes yes 2 0.00016425 166.66 By MS/MS 3 1.41 1 1 1 1 1 5 2573300 2573300 0 1793 677 1849 4391;4392;4393;4394;4395 3696;3697;3698;3699;3700 3697 5 451590 0 AWLAGRPER GANPWRCDCRLVPLRAWLAGRPERAPYRDL RLVPLRAWLAGRPERAPYRDLRCVAPPALR R A W E R A 2 2 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 9 1 1054.5672 P13224 P13224 102 110 GP1BB Platelet glycoprotein Ib beta chain yes yes 2 0.010668 94.407 By MS/MS 7 0 1 1 2891200 2891200 0 1794 599 1850 4396 3701 3701 1 45386 0 AWTQVLLGQAEDK EIERILGVRLQAGLRAWTQVLLGQAEDKAE LRAWTQVLLGQAEDKAEVDMDTDAPQVSHK R A W D K A 2 0 0 1 0 2 1 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 13 0 1457.7514 Q14204 Q14204 921 933 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00010197 187.78 By MS/MS 1.5 0.5 1 1 2 234660 234660 0 1795 1433 1851 4397;4398 3702;3703 3702 2 62413 0 AYAALTDEESR PDKGGDEVMFMRIAKAYAALTDEESRKNWE RIAKAYAALTDEESRKNWEEFGNPDGPQAT K A Y S R K 3 1 0 1 0 0 2 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 11 0 1224.5622 Q9UGP8 Q9UGP8 148 158 SEC63 Translocation protein SEC63 homolog yes yes 2 0.00020165 142.98 By MS/MS 4 0 1 1 1772400 1772400 0 1796 2724 1852 4399 3704 3704 1 166800 0 AYADFYR VAALYKFRVADQRKKAYADFYRNYDVMKDF RVADQRKKAYADFYRNYDVMKDFEEMRKAG K A Y Y R N 2 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 7 0 904.40792 P09669 P09669 48 54 COX6C Cytochrome c oxidase subunit 6C yes yes 1 0.037506 94.163 By MS/MS 10 0 1 1 610160 610160 0 1797 542 1853 4400 3705 3705 1 32885 0 AYALAFAER GRVVLVTGAGAGLGRAYALAFAERGALVVV GAGLGRAYALAFAERGALVVVNDLGGDFKG R A Y E R G 4 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 9 0 1010.5185 P51659 P51659 24 32 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 2 0.00076576 138.54 By MS/MS 5 0 1 1 1035600 1035600 0 1798 1004 1854 4401 3706 3706 1 10387 0 AYAQGISR SAAVTALNSESNFARAYAQGISRTKYWELI SESNFARAYAQGISRTKYWELIYEDSMDLI R A Y S R T 2 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 8 0 864.44537 O75390 O75390 184 191 CS Citrate synthase, mitochondrial yes yes 2 0.0060519 120.62 By MS/MS 7 0 1 1 3029300 3029300 0 1799 321 1855 4402 3707 3707 1 47555 0 AYDATHLVK KAFSGYLGTDQSKWKAYDATHLVKSYPGSQ DQSKWKAYDATHLVKSYPGSQLDILIDQGK K A Y V K S 2 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 1016.5291 P10768 P10768 201 209 ESD S-formylglutathione hydrolase yes yes 2;3 7.9161E-05 146.58 By MS/MS 8.33 0.471 2 1 3 4918700 4918700 0 1800 568 1856 4403;4404;4405 3708;3709 3708 2 63623 0 AYDHLFK ______________________________ ______________________________ K A Y F K L 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 7 0 892.4443 P51153 P51153 4 10 RAB13 Ras-related protein Rab-13 yes yes 2 0.022538 110.34 By MS/MS 9 0 1 1 1252900 1252900 0 1801 992 1857 4406 3710 3710 1 24658 0 AYEILSNEEKR NKDPGAEDKFIQISKAYEILSNEEKRSNYD QISKAYEILSNEEKRSNYDQYGDAGENQGY K A Y K R S 1 1 1 0 0 0 3 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1350.6779 Q9Y2G8 Q9Y2G8 76 86 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 3 0.0068998 90.827 By MS/MS 4 0 1 1 1315200 1315200 0 1802 2827 1858 4407 3711 3711 1 123770 0 AYFMQLQTR VDSTAESCPKCEHPRAYFMQLQTRSADEPM KCEHPRAYFMQLQTRSADEPMTTFYKCCNA R A Y T R S 1 1 0 0 0 2 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 9 0 1156.5699 Q9Y2Y1 Q9Y2Y1 77 85 POLR3K DNA-directed RNA polymerase III subunit RPC10 yes yes 2 0.011006 98.033 By MS/MS 10 0 1 1 288480 288480 0 1803 2849 1859 4408 3712 3712 1187 1 15548 0 AYGELPEHAK DVILKYNADEARSLKAYGELPEHAKINETD ARSLKAYGELPEHAKINETDTFGPGDDDEI K A Y A K I 2 0 0 0 0 0 2 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 10 0 1113.5455 P47813;O14602 P47813 105 114 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 0.00030289 140.14 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 16517000 16455000 61686 1804 927 1860 4409;4410;4411 3713;3714 3714 2 334820 140660 AYGPGIEPTGNMVK PGAPLRPKLNPKKARAYGPGIEPTGNMVKK RAYGPGIEPTGNMVKKRAEFTVETRSAGQG R A Y V K K 1 0 1 0 0 0 1 3 0 1 0 1 1 0 2 0 1 0 1 1 0 0 14 0 1432.7021 P21333 P21333 286 299 FLNA Filamin-A yes yes 2 0.0042274 106.16 By MS/MS 2 0.816 2 2 2 6 2059300 2059300 0 1805 677 1861;1862 4412;4413;4414;4415;4416;4417 3715;3716 3716 338 2 565900 0 AYHSGYGAHGSK ______________________________ ______________________________ M A Y S K H 2 0 0 0 0 0 0 3 2 0 0 1 0 0 0 2 0 0 2 0 0 0 12 0 1233.5527 O95070 O95070 2 13 YIF1A Protein YIF1A yes yes 3 0.0051521 107.97 By MS/MS 8 0 1 1 852290 852290 0 1806 383 1863 4418 3717 3717 1 10760 0 AYIASAGADALAK KLDESIYDVAFHSSKAYIASAGADALAKVF SKAYIASAGADALAKVFV____________ K A Y A K V 6 0 0 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1220.6401 Q13033 Q13033 782 794 STRN3 Striatin-3 yes yes 2 0.0002887 169.99 By MS/MS 4 0 1 1 1426200 1426200 0 1807 1346 1864 4419 3718 3718 1 134220 0 AYILNLVK VSDYAQMDRVLREERAYILNLVKQIKKTGC RVLREERAYILNLVKQIKKTGCNVLLIQKS R A Y V K Q 1 0 1 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 8 0 932.5695 P50991 P50991 281 288 CCT4 T-complex protein 1 subunit delta yes yes 2 0.00020833 170.17 By MS/MS 6.5 1.12 1 1 1 1 4 50147000 50147000 0 1808 985 1865 4420;4421;4422;4423 3719;3720;3721;3722 3720 4 387810 0 AYLEEECPATLR KQKWEAEPVYVQRAKAYLEEECPATLRKYL RAKAYLEEECPATLRKYLKYSKNILDRQDP K A Y L R K 2 1 0 0 1 0 3 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 12 0 1450.6762 P25311 P25311 180 191 AZGP1 Zinc-alpha-2-glycoprotein yes yes 2 1.2793E-08 194.06 By matching By MS/MS 4 2.39 1 2 1 1 2 2 5 671800 279880 391920 1809 720 1866 4424;4425;4426;4427;4428;4429;4430 3723;3724;3725;3726;3727;3728;3729 3729 6 22358 401060 AYLEGTCVEWLR TQRKLEAARAAEQLRAYLEGTCVEWLRRYL QLRAYLEGTCVEWLRRYLENGKETLQRAEP R A Y L R R 1 1 0 0 1 0 2 1 0 0 2 0 0 0 0 0 1 1 1 1 0 0 12 0 1495.7129 P10321 P10321 182 193 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 6.7933E-09 218.6 By MS/MS 7 0 1 1 362620 362620 0 1810 558 1867 4431 3730;3731 3730 2 5692.5 0 AYLNQTVTEFK VDLKAESVAAPITVRAYLNQTVTEFKQLIS ITVRAYLNQTVTEFKQLISKAIHLPAETMR R A Y F K Q 1 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 2 0 1 1 0 0 11 0 1312.6663 Q96K76 Q96K76 736 746 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 0.0032741 112.3 By MS/MS 3 0 1 1 131690 131690 0 1811 2183 1868 4432 3732 3732 0 2409.5 0 AYLPQELLGK VSALSQTGSLFKPRKAYLPQELLGKEGFDA FKPRKAYLPQELLGKEGFDALDPFIPILVS K A Y G K E 1 0 0 0 0 1 1 1 0 0 3 1 0 0 1 0 0 0 1 0 0 0 10 0 1130.6336 P51398 P51398 322 331 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.050182 72.243 By MS/MS 7 0 1 1 1320600 1320600 0 1812 993 1869 4433 3733 3733 1 20730 0 AYLQQLR IYAKPANKQEDEVMRAYLQQLRQETGLRLC KQEDEVMRAYLQQLRQETGLRLCEKVFDPQ R A Y L R Q 1 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 890.4974 O15145 O15145 131 137 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 2 0.016816 117.7 By MS/MS 8.5 0.5 1 1 2 12404000 12404000 0 1813 164 1870 4434;4435 3734 3734 1 169870 0 AYMEDAPLLR GHSAIYNMCHLMEDRAYMEDAPLLRGAVFF LMEDRAYMEDAPLLRGAVFFVGMALWGAHR R A Y L R G 2 1 0 1 0 0 1 0 0 0 2 0 1 0 1 0 0 0 1 0 0 0 10 0 1177.5801 P49815 P49815 284 293 TSC2 Tuberin yes yes 2 0.010519 93.162 By MS/MS 2 0 1 1 103690 103690 0 1814 965 1871 4436 3735 3735 1 35073 0 AYNEAEVLYNR PECMALKADVVAKKRAYNEAEVLYNRSLNE AKKRAYNEAEVLYNRSLNEYKALKKDDEQL R A Y N R S 2 1 2 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 11 0 1340.6361 Q96SB8 Q96SB8 359 369 SMC6 Structural maintenance of chromosomes protein 6 yes yes 2 0.0063674 107.55 By MS/MS 3 0 1 1 188760 188760 0 1815 2234 1872 4437 3736 3736 0 3453.7 0 AYPAAITILETAQK DARGMTPFMSAVSGRAYPAAITILETAQKI RAYPAAITILETAQKIAKAEISSSEKEEDV R A Y Q K I 4 0 0 0 0 1 1 0 0 2 1 1 0 0 1 0 2 0 1 0 0 0 14 0 1488.8188 O95071 O95071 1125 1138 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 9.7469E-05 209.8 By MS/MS 1.5 0.5 1 1 2 414460 414460 0 1816 384 1873 4438;4439 3737;3738;3739;3740 3740 4 126450 0 AYPEVLAQGR ASLQATLLGLAALNKAYPEVLAQGRTARVT AALNKAYPEVLAQGRTARVTLTSPWPRPLP K A Y G R T 2 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 10 0 1102.5771 Q8N2G8 Q8N2G8 141 150 GHDC GH3 domain-containing protein yes yes 2 0.049354 72.643 By MS/MS 6 0 1 1 2812600 2812600 0 1817 1908 1874 4440 3741 3741 1 19334 0 AYPHVFTK MRHVISYSLSPFEQRAYPHVFTKGIPNVLR LSPFEQRAYPHVFTKGIPNVLRRIRESFFR R A Y T K G 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 0 1 1 0 0 8 0 961.50215 O14949 O14949 26 33 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 2 0.025808 93.195 By MS/MS 10 0 1 1 454330 454330 0 1818 147 1875 4441 3742 3742 1 24487 0 AYQCVVLLQGK ESKKRFDTEEEFKKRAYQCVVLLQGKNPDI FKKRAYQCVVLLQGKNPDITKAWKLICDVS R A Y G K N 1 0 0 0 1 2 0 1 0 0 2 1 0 0 0 0 0 0 1 2 0 0 11 0 1277.6802 P54136 P54136 290 300 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00052347 141.48 By MS/MS 5 0 1 1 6472000 6472000 0 1819 1043 1876 4442 3743 3743 1 64911 0 AYQCVVLLQGKNPDITK ESKKRFDTEEEFKKRAYQCVVLLQGKNPDI QCVVLLQGKNPDITKAWKLICDVSRQELNK R A Y T K A 1 0 1 1 1 2 0 1 0 1 2 2 0 0 1 0 1 0 1 2 0 0 17 1 1946.0295 P54136 P54136 290 306 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.013512 80.632 By MS/MS 5 0 1 1 2712800 2712800 0 1820 1043 1877 4443 3744 3744 1 27208 0 AYQDRYQDLGAYSSAR QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA YQDRYQDLGAYSSARKCLAKQRQRMLQERK K A Y A R K 3 2 0 2 0 2 0 1 0 0 1 0 0 0 0 2 0 0 3 0 0 0 16 1 1862.8547 O96000 O96000 132 147 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.00022543 170.11 By MS/MS 9 0 1 1 2349300 2349300 0 1821 436 1878 4444 3745 3745 1 46234 0 AYQHGGVTGLSQY IDVALSQDSTYQGERAYQHGGVTGLSQY__ ERAYQHGGVTGLSQY_______________ R A Y Q Y - 1 0 0 0 0 2 0 3 1 0 1 0 0 0 0 1 1 0 2 1 0 0 13 0 1379.647 Q92900 Q92900 1117 1129 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0029617 133.42 By MS/MS 3 0 1 1 0 0 0 1822 2077 1879 4445 3746 3746 1 0 0 AYQKQPTIFQNK ______________________________ TERAYQKQPTIFQNKKRVLLGETGKEKLPR R A Y N K K 1 0 1 0 0 3 0 0 0 1 0 2 0 1 1 0 1 0 1 0 0 0 12 1 1464.7725 P62280 P62280 9 20 RPS11 40S ribosomal protein S11 yes yes 2;3 2.4252E-05 187.99 By MS/MS By matching 9.4 0.49 3 2 4 1 10360000 10300000 59896 1823 1152 1880 4446;4447;4448;4449;4450 3747;3748;3749 3747 3 210510 136580 AYSDQAIVNLLK KALLDNTKDKNTVVRAYSDQAIVNLLKMRQ VVRAYSDQAIVNLLKMRQGEEVFQSLSKIL R A Y L K M 2 0 1 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1333.7242 Q92616 Q92616 2610 2621 GCN1L1 Translational activator GCN1 yes yes 2 1.4592E-05 178.54 By MS/MS 5 2 1 1 1 1 1 1 1 7 2566400 2566400 0 1824 2064 1881 4451;4452;4453;4454;4455;4456;4457 3750;3751;3752 3751 3 398910 0 AYSIVIR SNASSYLTSASSLARAYSIVIRQISDLMGL TSASSLARAYSIVIRQISDLMGLIPKYNHL R A Y I R Q 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 1 1 0 0 7 0 820.48069 O95071 O95071 1787 1793 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.027749 106.42 By MS/MS 2 0 1 1 448270 448270 0 1825 384 1882 4458 3753 3753 1 151620 0 AYSSFGGGR ______________________________ DTYDDRAYSSFGGGRGSRGSAGGHGSRSQK R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.029678 84.743 By MS/MS 8.5 0.5 1 1 2 1423000 1423000 0 1826 1485 1883 4459;4460 3754 3754 1 18214 0 AYTGFSSNSER STRETPSQENGPTAKAYTGFSSNSERGTEA PTAKAYTGFSSNSERGTEAGQVGEPGIPTG K A Y E R G 1 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 1 0 1 0 0 0 11 0 1217.5313 O15355 O15355 210 220 PPM1G Protein phosphatase 1G yes yes 2 6.3124E-05 155.11 By MS/MS 5 0 1 1 636340 636340 0 1827 184 1884 4461 3755 3755 1 6382.1 0 AYTPPEDLQSR EKKEPILVCPPLRSRAYTPPEDLQSRLESY LRSRAYTPPEDLQSRLESYVKEVFGSSLPS R A Y S R L 1 1 0 1 0 1 1 0 0 0 1 0 0 0 2 1 1 0 1 0 0 0 11 0 1275.6095 Q8N5N7 Q8N5N7 59 69 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2 0.0011415 109.79 By MS/MS 10 0 1 1 1097700 1097700 0 1828 1925 1885 4462 3756 3756 1 59164 0 AYVDDTPAEQMK ETIMKYAEKLIQEGKAYVDDTPAEQMKAER EGKAYVDDTPAEQMKAEREQRIDSKHRKNP K A Y M K A 2 0 0 2 0 1 1 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 12 0 1366.6075 P07814 P07814 289 300 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 5.8061E-25 280.11 By MS/MS 3 0 2 2 1088300 1088300 0 1829 512 1886;1887 4463;4464 3757;3758 3758 214 2 19913 0 AYVEQIEK TCPVAKEIIYTLKERAYVEQIEKAFNYASK IYTLKERAYVEQIEKAFNYASKVLLDFLME R A Y E K A 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 8 0 978.50221 Q9BSJ2 Q9BSJ2 483 490 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.020458 99.136 By MS/MS 4.5 0.5 1 1 2 2682100 2682100 0 1830 2307 1888 4465;4466 3759 3759 1 229940 0 AYVLLLR FLDYLKRFACSTVVRAYVLLLRSYQQNSAH FACSTVVRAYVLLLRSYQQNSAHTNHCIVK R A Y L R S 1 1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 1 1 0 0 7 0 846.53272 Q9UNS1 Q9UNS1 706 712 TIMELESS Protein timeless homolog yes yes 2 0.017982 114.67 By MS/MS 3 0 1 1 126590 126590 0 1831 2792 1889 4467 3760 3760 1 2316.3 0 AYVPALQMAFK FLLSLPHNIIELDVRAYVPALQMAFKLGLS LDVRAYVPALQMAFKLGLSYTPLAEVGLNA R A Y F K L 3 0 0 0 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 1 0 0 11 0 1237.6529 P78527 P78527 747 757 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.016226 87.616 By MS/MS 1.67 0.471 1 2 3 582880 582880 0 1832 1225 1890;1891 4468;4469;4470 3761;3762;3763;3764 3763 717 4 181630 0 AYVSLFMR WLVRDLRGKSEKEFKAYVSLFMRHLCEPGA KSEKEFKAYVSLFMRHLCEPGADGAETFAD K A Y M R H 1 1 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 1 1 0 0 8 0 985.50552 Q14839;Q8TDI0;Q12873 Q14839 1458 1465 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0039638 129.68 By MS/MS 2 0 1 1 334570 334570 0 1833 1459 1892 4471 3765 3765 853 1 113160 0 AYVSTLMGVPGR LTVDTSLQNGRMSIKAYVSTLMGVPGRTMG SIKAYVSTLMGVPGRTMGVMFTPLTVKYAY K A Y G R T 1 1 0 0 0 0 0 2 0 0 1 0 1 0 1 1 1 0 1 2 0 0 12 0 1249.6489 O00303 O00303 215 226 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.00020333 150.27 By MS/MS 6.5 0.5 2 2 4 19107000 19107000 0 1834 99 1893;1894 4472;4473;4474;4475 3766;3767;3768 3768 60 3 221750 0 AYYQLAK ILGVPRNASQKEIKKAYYQLAKKYHPDTNK ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE K A Y A K K 2 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 7 0 855.44905 Q96EY1 Q96EY1 112 118 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.044027 94.163 By MS/MS 7 0 1 1 4120100 4120100 0 1835 2150 1895 4476 3769 3769 1 64678 0 CAEALVPLLSNVNVSDR WQTPLHIAAANKAVKCAEALVPLLSNVNVS EALVPLLSNVNVSDRAGRTALHHAAFSGHG K C A D R A 2 1 2 1 1 0 1 0 0 0 3 0 0 0 1 2 0 0 0 3 0 0 17 0 1855.9462 O15084 O15084 122 138 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.0004015 130.66 By MS/MS 4 0 1 1 124950 124950 0 1836 158 1896 4477 3770;3771 3771 2 11758 0 CAIKVEQSAER VDVDFVRKAVRAIGRCAIKVEQSAERCVST AIGRCAIKVEQSAERCVSTLLDLIQTKVNY R C A E R C 2 1 0 0 1 1 2 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 11 1 1289.6398 Q10567 Q10567 380 390 AP1B1 AP-1 complex subunit beta-1 no no 3 0.024127 102.95 By MS/MS 4 0 1 1 543270 543270 0 1837 1322 1897 4478 3772 3772 1 51126 0 CALGVFR CVNYVPEPENSALLRCALGVFRKFSRFPEA PENSALLRCALGVFRKFSRFPEALRLALML R C A F R K 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 821.42179 Q13200 Q13200 251 257 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.013605 126.05 By MS/MS 4.5 0.5 1 1 2 2906500 2906500 0 1838 1365 1898 4479;4480 3773 3773 1 239260 0 CALLAAQANK EYVKLQKKLAETEKRCALLAAQANKESSSE ETEKRCALLAAQANKESSSESFISRLLAIV R C A N K E 4 0 1 0 1 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1058.5543 Q9P2R3 Q9P2R3 34 43 ANKFY1 Rabankyrin-5 yes yes 2 0.001155 120.62 By MS/MS 3 0 1 1 594240 594240 0 1839 2689 1899 4481 3774 3774 1 10873 0 CAMTALSSK VKKADKVEQRKLLEKCAMTALSSKLISQQK RKLLEKCAMTALSSKLISQQKAFFAKMVVD K C A S K L 2 0 0 0 1 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 9 0 967.44669 Q99832 Q99832 158 166 CCT7 T-complex protein 1 subunit eta yes yes 2 7.0761E-05 167.23 By MS/MS 6 0 1 1 1266700 1266700 0 1840 2270 1900 4482 3775 3775 1053 1 8707.6 0 CATPLKDEERAEEIVAAQEK AVAMAKTTLEQLLMRCATPLKDEERAEEIV KDEERAEEIVAAQEKSFHHVTHDLVREVTS R C A E K S 4 1 0 1 1 1 5 0 0 1 1 2 0 0 1 0 1 0 0 1 0 0 20 2 2286.1162 Q9Y4A5 Q9Y4A5 1217 1236 TRRAP Transformation/transcription domain-associated protein yes yes 3 0.054708 58.427 By MS/MS 10 0 1 1 306610 306610 0 1841 2890 1901 4483 3776 3776 1 16525 0 CAVVDVPFGGAK SVDEVKALASLMTYKCAVVDVPFGGAKAGV TYKCAVVDVPFGGAKAGVKINPKNYTDNEL K C A A K A 2 0 0 1 1 0 0 2 0 0 0 1 0 1 1 0 0 0 0 3 0 0 12 0 1218.6067 P00367;P49448 P00367 172 183 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.027359 81.338 By MS/MS 6 0 1 1 2511500 2511500 0 1842 441 1902 4484 3777 3777 1 17265 0 CCAADDKEACFAVEGPK QLKTVMENFVAFVDKCCAADDKEACFAVEG AADDKEACFAVEGPKLVVSTQTALA_____ K C C P K L 4 0 0 2 3 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 17 1 1926.791 CON__P02769 CON__P02769 581 597 yes yes 3 0.016411 77.222 By MS/MS 5.5 0.5 1 1 2 1275800 1275800 0 + 1843 43 1903 4485;4486 3778 3778 1 10663 0 CCLTYCFNKPEDK GVFMASHFDRHYCGKCCLTYCFNKPEDK__ GKCCLTYCFNKPEDK_______________ K C C D K - 0 0 1 1 3 0 1 0 0 0 1 2 0 1 1 0 1 0 1 0 0 0 13 1 1733.7211 P62979 P62979 144 156 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 2;3 2.1846E-32 301.11 By MS/MS 10 0 2 2 12095000 12095000 0 1844 1190 1904 4487;4488 3779;3780;3781 3781 3 651880 0 CCNAQCGHR LQTRSADEPMTTFYKCCNAQCGHRWRD___ MTTFYKCCNAQCGHRWRD____________ K C C H R W 1 1 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1161.4226 Q9Y2Y1 Q9Y2Y1 97 105 POLR3K DNA-directed RNA polymerase III subunit RPC10 yes yes 2 0.0016454 125.81 By MS/MS 10 0 1 1 10650 10650 0 1845 2849 1905 4489 3782 3782 1 574.02 0 CCNVSSR AELGKLYSVVSQLIRCCNVSSRMQSSINGN SVVSQLIRCCNVSSRMQSSINGNPPLPNPF R C C S R M 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 7 0 881.34837 Q93008 Q93008 2238 2244 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.041333 96.19 By MS/MS 2 0 1 1 404320 404320 0 1846 2085 1906 4490 3783 3783 1 136760 0 CCSGAIIVLTK PTEATAVGAVEASFKCCSGAIIVLTKSGRS ASFKCCSGAIIVLTKSGRSAHQVARYRPRA K C C T K S 1 0 0 0 2 0 0 1 0 2 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1220.6257 P14618 P14618 423 433 PKM Pyruvate kinase PKM yes yes 2 0.0001969 143.4 By MS/MS 6.5 0.5 1 1 2 5417200 5417200 0 1847 614 1907 4491;4492 3784;3785 3784 2 40058 0 CCTESLVNR CVLHEKTPVSEKVTKCCTESLVNRRPCFSA SEKVTKCCTESLVNRRPCFSALTPDETYVP K C C N R R 0 1 1 0 2 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1137.4907 CON__P02768-1;P02768;CON__P02769 CON__P02769 499 507 ALB Serum albumin no no 2 0.0052749 108.74 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 916990 891050 25939 + 1848 43;42 1908 4493;4494;4495 3786;3787;3788;3789 3789 4 7492.4 21783 CDENILWLDYK GATLKITLDNAYMEKCDENILWLDYKNICK YMEKCDENILWLDYKNICKVVEVGSKIYVD K C D Y K N 0 0 1 2 1 0 1 0 0 1 2 1 0 0 0 0 0 1 1 0 0 0 11 0 1467.6704 P14618 P14618 152 162 PKM Pyruvate kinase PKM yes yes 2 1.4666E-18 257.72 By MS/MS 6 0 1 1 1043700 1043700 0 1849 614 1909 4496 3790 3790 1 7174.4 0 CDEYIEALNTGK LLKAKYELLNAGYKKCDEYIEALNTGKLQQ YKKCDEYIEALNTGKLQQQPGCTAEETLEA K C D G K L 1 0 1 1 1 0 2 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 12 0 1411.6289 O14802 O14802 724 735 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 5.1065E-05 167.11 By MS/MS 3.5 0.5 1 1 2 690740 690740 0 1850 139 1910 4497;4498 3791 3791 1 33968 0 CDFTEDQTAEFK ______________________________ ______________________________ M C D F K E 1 0 0 2 1 1 2 0 0 0 0 1 0 2 0 0 2 0 0 0 0 0 12 0 1489.6031 P60660 P60660 2 13 MYL6 Myosin light polypeptide 6 yes yes 2 9.7403E-18 252.14 By MS/MS 10 0 1 1 536360 536360 0 1851 1094 1911 4499 3792;3793 3792 2 28908 0 CDIIIISGR EGREAKDCDPGSPRRCDIIIISGRKEKCEA PGSPRRCDIIIISGRKEKCEAAKEALEALV R C D G R K 0 1 0 1 1 0 0 1 0 4 0 0 0 0 0 1 0 0 0 0 0 0 9 0 1045.559 Q00341 Q00341 948 956 HDLBP Vigilin yes yes 2 0.031398 83.998 By MS/MS 3 0 1 1 261340 261340 0 1852 1260 1912 4500 3794 3794 1 4781.8 0 CDLVLDAAHEK NGGIYEGVFKTYSPKCDLVLDAAHEKSTES YSPKCDLVLDAAHEKSTESSSGPKREEIME K C D E K S 2 0 0 2 1 0 1 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1269.6023 Q99700 Q99700 301 311 ATXN2 Ataxin-2 yes yes 2;3 0.00020371 139.76 By MS/MS 3 0 2 2 1315900 1315900 0 1853 2258 1913 4501;4502 3795;3796 3795 1 24078 0 CDPAGYYCGFK ILIGIDEEQGPQVYKCDPAGYYCGFKATAA QVYKCDPAGYYCGFKATAAGVKQTESTSFL K C D F K A 1 0 0 1 2 0 0 2 0 0 0 1 0 1 1 0 0 0 2 0 0 0 11 0 1336.5216 P60900 P60900 154 164 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.0037746 107.15 By MS/MS 8 0 1 1 1385100 1385100 0 1854 1099 1914 4503 3797;3798 3797 2 17487 0 CDPCQPAFGPVLLK HKCARFLALCISNGKCDPCQPAFGPVLLKA KCDPCQPAFGPVLLKALLDNMSFLPAATTG K C D L K A 1 0 0 1 2 1 0 1 0 0 2 1 0 1 3 0 0 0 0 1 0 0 14 0 1600.7742 Q9NR09 Q9NR09 1417 1430 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.00070933 130.44 By MS/MS 1.5 0.5 1 1 2 159020 159020 0 1855 2543 1915 4504;4505 3799 3799 1 48417 0 CDQQQIQCR ______________________________ ______________________________ M C D C R L 0 1 0 1 2 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1234.5183 Q5T749 Q5T749 2 10 KPRP Keratinocyte proline-rich protein yes yes 2 0.00075481 134.26 By MS/MS 7 3 1 1 2 80387 0 80387 1856 1636 1916 4506;4507 3800;3801 3800 2 0 135410 CDTVVSEISTGQR PDIQVQAKRLAEKLRCDTVVSEISTGQRTV LRCDTVVSEISTGQRTVNFKINRELLTKTV R C D Q R T 0 1 0 1 1 1 1 1 0 1 0 0 0 0 0 2 2 0 0 2 0 0 13 0 1450.6722 Q5T160 Q5T160 74 86 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.00036812 145.28 By MS/MS 6 0 1 1 1689600 1689600 0 1857 1627 1917 4508 3802 3802 1 11615 0 CDTYQLIMEVR TGVITTTTPFLDREKCDTYQLIMEVRDMGG DREKCDTYQLIMEVRDMGGQPFGLFNTGTI K C D V R D 0 1 0 1 1 1 1 0 0 1 1 0 1 0 0 0 1 0 1 1 0 0 11 0 1426.6585 Q08554 Q08554 315 325 DSC1 Desmocollin-1 yes yes 2 0.0010649 132.25 By MS/MS 3 0 1 1 101370 0 101370 1858 1311 1918 4509 3803 3803 781 0 0 12903 CDVDIRK ESCGIHETTFNSIMKCDVDIRKDLYANTVL TTFNSIMKCDVDIRKDLYANTVLSGGTTMY K C D R K D 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 7 1 904.44365 P60709;P63261;Q562R1 P63261 285 291 ACTB;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2 0.036322 133.81 By MS/MS By matching 7 0 2 1 1 7895400 7813400 82021 1859 1095;1203;1594 1919 4510;4511 3804 3804 1 122660 147720 CEDKFTK IDLSKRRVSPEEAIKCEDKFTKSKTVYSIL VSPEEAIKCEDKFTKSKTVYSILRHVAEVL K C E T K S 0 0 0 1 1 0 1 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 7 1 926.41677 P05198 P05198 98 104 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 3 0.022796 100.19 By MS/MS 7 0 1 1 662580 662580 0 1860 489 1920 4512 3805 3805 1 10401 0 CEFAVGYQR MNGRLHLGHTFSLSKCEFAVGYQRLKGKCC TFSLSKCEFAVGYQRLKGKCCLFPFGLHCT K C E Q R L 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 9 0 1128.5022 Q9P2J5 Q9P2J5 70 78 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0010118 133.86 By MS/MS 3 0 1 1 3466900 3466900 0 1861 2684 1921 4513 3806 3806 1 63435 0 CEFQDAYVLLSEK GYISPYFINTSKGQKCEFQDAYVLLSEKKI QKCEFQDAYVLLSEKKISSIQSIVPALEIA K C E E K K 1 0 0 1 1 1 2 0 0 0 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1600.7443 P10809 P10809 237 249 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 4.4497E-44 331.54 By MS/MS By MS/MS 6.29 0.881 1 4 1 1 6 1 54566000 54505000 61281 1862 569 1922 4514;4515;4516;4517;4518;4519;4520 3807;3808;3809;3810;3811;3812;3813;3814;3815;3816 3809 9 384870 62796 CEFQDAYVLLSEKK GYISPYFINTSKGQKCEFQDAYVLLSEKKI KCEFQDAYVLLSEKKISSIQSIVPALEIAN K C E K K I 1 0 0 1 1 1 2 0 0 0 2 2 0 1 0 1 0 0 1 1 0 0 14 1 1728.8393 P10809 P10809 237 250 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.9938E-07 203.85 By MS/MS 6.17 1.07 2 2 1 1 6 98046000 98046000 0 1863 569 1923 4521;4522;4523;4524;4525;4526 3817;3818;3819 3817 3 695030 0 CEHDGVMTGANGEVSFINIK YRRWKLGDDIDLIVRCEHDGVMTGANGEVS VMTGANGEVSFINIKTLNEWDSRHCNGVDW R C E I K T 1 0 2 1 1 0 2 3 1 2 0 1 1 1 0 1 1 0 0 2 0 0 20 0 2176.9881 O15371 O15371 375 394 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.0011159 94.325 By MS/MS 5 0 1 1 1162700 1162700 0 1864 185 1924 4527 3820 3820 94 1 11662 0 CEKPFLGHR AMGKQWHVEHFVCAKCEKPFLGHRHYERKG HFVCAKCEKPFLGHRHYERKGLAYCETHYN K C E H R H 0 1 0 0 1 0 1 1 1 0 1 1 0 1 1 0 0 0 0 0 0 0 9 1 1142.5655 P48059;Q7Z4I7 P48059 222 230 LIMS1;LIMS2 LIM and senescent cell antigen-like-containing domain protein 1;LIM and senescent cell antigen-like-containing domain protein 2 yes no 3 0.032713 85.67 By MS/MS 8 0 1 1 491580 491580 0 1865 933 1925 4528 3821 3821 1 6206.1 0 CELDQLLQDK VAASHQVAELVKELRCELDQLLQDKIKNPS VKELRCELDQLLQDKIKNPSIDLCTCPRGS R C E D K I 0 0 0 2 1 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1260.602 Q6P158 Q6P158 1349 1358 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.00021509 146.11 By MS/MS 3 0 1 1 136670 136670 0 1866 1697 1926 4529 3822 3822 1 2500.8 0 CELLYEGPPDDEAAMGIK ITIHLPSPVTAQKYRCELLYEGPPDDEAAM LYEGPPDDEAAMGIKSCDPKGPLMMYISKM R C E I K S 2 0 0 2 1 0 3 2 0 1 2 1 1 0 2 0 0 0 1 0 0 0 18 0 2006.8965 P13639 P13639 369 386 EEF2 Elongation factor 2 yes yes 2 1.6589E-11 241.84 By MS/MS 4.8 0.748 2 2 1 5 11536000 11536000 0 1867 602 1927;1928 4530;4531;4532;4533;4534 3823;3824;3825 3824 282 3 897050 0 CELPVSYLEPK LIFMVPVACGLFPQKCELPVSYLEPKLQDT FPQKCELPVSYLEPKLQDTIKAKYGELEPY K C E P K L 0 0 0 0 1 0 2 0 0 0 2 1 0 0 2 1 0 0 1 1 0 0 11 0 1333.6588 Q96NB2 Q96NB2 290 300 SFXN2 Sideroflexin-2 yes yes 2 0.00021292 142 By MS/MS 7.5 0.5 1 1 2 2548900 2548900 0 1868 2202 1929 4535;4536 3826 3826 1 32731 0 CEMEQQNQEYK QEMIGSVEEQLAQLRCEMEQQNQEYKILLD AQLRCEMEQQNQEYKILLDVKTRLEQEIAT R C E Y K I 0 0 1 0 1 3 3 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 11 0 1485.5864 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q61782 CON__P02533 389 399 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2 6.4722E-05 160.77 By MS/MS 3 0 1 1 205680 0 205680 + 1869 39;57 1930 4537 3827 3827 1 0 26180 CESAFLSK YARTDGKVFQFLNAKCESAFLSKRNPRQIN FQFLNAKCESAFLSKRNPRQINWTVLYRRK K C E S K R 1 0 0 0 1 0 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 8 0 940.43242 P83731 P83731 36 43 RPL24 60S ribosomal protein L24 yes yes 2 0.016025 104.06 By MS/MS 9 0 1 1 3672000 3672000 0 1870 1241 1931 4538 3828 3828 1 72265 0 CESGFIEELPEETR SVEIVPRLPDYICPRCESGFIEELPEETRS RCESGFIEELPEETRSTENGSAPSTAPTDQ R C E T R S 0 1 0 0 1 0 5 1 0 1 1 0 0 1 1 1 1 0 0 0 0 0 14 0 1694.7458 Q9BV68 Q9BV68 32 45 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 2 1.3893E-18 270.67 By MS/MS 7 0 1 1 882690 882690 0 1871 2329 1932 4539 3829 3829 1 13857 0 CESLLGLDPATCSR QPDQPNYGFPLDLLRCESLLGLDPATCSRV RCESLLGLDPATCSRVLNKNYTLLVSMAPL R C E S R V 1 1 0 1 2 0 1 1 0 0 3 0 0 0 1 2 1 0 0 0 0 0 14 0 1577.7178 Q658Y4 Q658Y4 479 492 FAM91A1 Protein FAM91A1 yes yes 2 0.00084013 128.08 By MS/MS 4 0 1 1 1104800 1104800 0 1872 1668 1933 4540 3830 3830 1 103970 0 CEVPATLFEICK TVGLRLKSFFEGHFKCEVPATLFEICKLSE HFKCEVPATLFEICKLSEDEWTSQAHPGYG K C E C K L 1 0 0 0 2 0 2 0 0 1 1 1 0 1 1 0 1 0 0 1 0 0 12 0 1465.6945 P57678 P57678 784 795 GEMIN4 Gem-associated protein 4 yes yes 2 0.00087135 128.81 By MS/MS 4.5 0.5 1 1 2 436960 436960 0 1873 1079 1934 4541;4542 3831 3831 1 36421 0 CFAETPNKK VVTFCETVVETSSLKCFAETPNKKNKITMI ETSSLKCFAETPNKKNKITMIAEPLEKGLA K C F K K N 1 0 1 0 1 0 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 0 9 1 1093.5226 Q15029 Q15029 674 682 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0022886 141.52 By MS/MS 3.5 0.5 1 1 2 1020200 1020200 0 1874 1476 1935 4543;4544 3832 3832 1 60631 0 CFGEQNK HTHSSVKSVPENLLKCFGEQNKKQPRQDYQ SVPENLLKCFGEQNKKQPRQDYQLGFTLIW K C F N K K 0 0 1 0 1 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 7 0 881.37015 Q13155 Q13155 168 174 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.044235 94.006 By MS/MS 8 0.816 1 1 1 3 1032600 1032600 0 1875 1360 1936 4545;4546;4547 3833 3833 1 15839 0 CFGEQNKK HTHSSVKSVPENLLKCFGEQNKKQPRQDYQ VPENLLKCFGEQNKKQPRQDYQLGFTLIWK K C F K K Q 0 0 1 0 1 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 8 1 1009.4651 Q13155 Q13155 168 175 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2;3 0.0087863 137.18 By MS/MS 7.5 0.5 2 2 4 2404300 2404300 0 1876 1360 1937 4548;4549;4550;4551 3834;3835;3836 3835 3 35635 0 CFGTGAAGNR FLESIAMHDIIAAEKCFGTGAAGNRTSPQE IAAEKCFGTGAAGNRTSPQEGERYNYSKCT K C F N R T 2 1 1 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 10 0 1009.44 P78527 P78527 1312 1321 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0007671 128.12 By MS/MS By matching 1.8 0.748 2 2 1 3 2 4080800 3962300 118480 1877 1225 1938 4552;4553;4554;4555;4556 3837;3838;3839;3840 3838 4 1034700 152700 CFIVGADNVGSK NYFLKIIQLLDDYPKCFIVGADNVGSKQMQ YPKCFIVGADNVGSKQMQQIRMSLRGKAVV K C F S K Q 1 0 1 1 1 0 0 2 0 1 0 1 0 1 0 1 0 0 0 2 0 0 12 0 1265.6074 P05388;Q8NHW5 P05388 27 38 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2 0.0014251 117.25 By MS/MS 7 0 1 1 2375600 2375600 0 1878 491 1939 4557 3841 3841 1 37293 0 CFSPGVIEVQEVQGK LLEPVEGEAAEELSRCFSPGVIEVQEVQGK CFSPGVIEVQEVQGKKVARVANPRLDTFSR R C F G K K 0 0 0 0 1 2 2 2 0 1 0 1 0 1 1 1 0 0 0 3 0 0 15 0 1675.824 O15160 O15160 256 270 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.00055176 161.25 By MS/MS 7 0 1 1 2132100 2132100 0 1879 166 1940 4558 3842 3842 1 33469 0 CFSPGVIEVQEVQGKK LLEPVEGEAAEELSRCFSPGVIEVQEVQGK FSPGVIEVQEVQGKKVARVANPRLDTFSRE R C F K K V 0 0 0 0 1 2 2 2 0 1 0 2 0 1 1 1 0 0 0 3 0 0 16 1 1803.9189 O15160 O15160 256 271 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 3 0.016389 104.55 By MS/MS 7 0 1 1 819280 819280 0 1880 166 1941 4559 3843 3843 1 12861 0 CFSVLGFCK SKVDEEQMKYKSEGKCFSVLGFCKSSQVQR YKSEGKCFSVLGFCKSSQVQRRFFMGNQVL K C F C K S 0 0 0 0 2 0 0 1 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 1116.5096 P13010 P13010 339 347 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.01668 90.37 By MS/MS 4.5 0.5 1 1 2 862250 862250 0 1881 597 1942 4560;4561 3844 3844 1 42005 0 CGAALAGHQLIR CSLLRLQETLSAADRCGAALAGHQLIRGLG ADRCGAALAGHQLIRGLGQECVLSSSPAVL R C G I R G 3 1 0 0 1 1 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1265.6663 P78527 P78527 25 36 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.00013315 158.07 By MS/MS 2.57 1.4 2 2 1 1 1 7 4958300 4958300 0 1882 1225 1943 4562;4563;4564;4565;4566;4567;4568 3845;3846;3847;3848 3845 4 1052400 0 CGDLCTHVETFVSSTR SGNSGKGGNQLRCPKCGDLCTHVETFVSST GDLCTHVETFVSSTRFVKCEKCHHFFVVLS K C G T R F 0 1 0 1 2 0 1 1 1 0 1 0 0 1 0 2 3 0 0 2 0 0 16 0 1867.8193 O76031 O76031 108 123 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 3 0.026715 98.281 By MS/MS 5 0 1 1 634140 634140 0 1883 360 1944 4569 3849 3849 0 6360.1 0 CGDLLAASQVVNR VEGHPVWALIYYCMRCGDLLAASQVVNRAQ MRCGDLLAASQVVNRAQHQLGEFKTWFQEY R C G N R A 2 1 1 1 1 1 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 13 0 1401.7034 Q8N1F7 Q8N1F7 328 340 NUP93 Nuclear pore complex protein Nup93 yes yes 2 1.7024E-11 233.84 By MS/MS 4 0 1 1 2281400 2281400 0 1884 1903 1945 4570 3850 3850 1 214690 0 CGDSVYAAEK SKFAQKYGGAEKCSRCGDSVYAAEKIIGAG EKCSRCGDSVYAAEKIIGAGKPWHKNCFRC R C G E K I 2 0 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 10 0 1098.4652 Q16527 Q16527 122 131 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 4.9767E-05 157.34 By MS/MS 9 0 1 1 928300 928300 0 1885 1548 1946 4571 3851 3851 1 18269 0 CGEAALNDPK LETHIHNQGLAAIEKCGEAALNDPKMYVQT AAIEKCGEAALNDPKMYVQTVLDVHKKYNA K C G P K M 2 0 1 1 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 10 0 1073.4812 Q13616 Q13616 355 364 CUL1 Cullin-1 yes yes 2 0.0041696 107.45 By MS/MS 4 0 1 1 711740 711740 0 1886 1402 1947 4572 3852 3852 1 66980 0 CGEALGLK ITDLKQKVENLFNEKCGEALGLKQAVKVPF ENLFNEKCGEALGLKQAVKVPFALFESFPE K C G L K Q 1 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 846.42694 P78347 P78347 745 752 GTF2I General transcription factor II-I yes yes 2 0.02311 96.19 By MS/MS 3 0 1 1 818620 818620 0 1887 1221 1948 4573 3853 3853 1 14978 0 CGEEIAVQFVDMVK SCPHLGASTKEAQSRCGEEIAVQFVDMVKG RCGEEIAVQFVDMVKGKSLTGVVNAQALTS R C G V K G 1 0 0 1 1 1 2 1 0 1 0 1 1 1 0 0 0 0 0 3 0 0 14 0 1623.7637 O43175 O43175 295 308 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00041464 138.02 By MS/MS 6 0 1 1 410560 410560 0 1888 195 1949 4574 3854 3854 1 2822.3 0 CGESGHLAK GFQFVSSSLPDICYRCGESGHLAKDCDLQE PDICYRCGESGHLAKDCDLQEDACYNCGRG R C G A K D 1 0 0 0 1 0 1 2 1 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 957.43381 P62633 P62633 57 65 CNBP Cellular nucleic acid-binding protein yes yes 2;3 0.00021091 139.97 By MS/MS 9.5 0.5 2 2 4 5228000 5228000 0 1889 1163 1950 4575;4576;4577;4578 3855;3856;3857;3858 3855 4 124170 0 CGESGHLAKDCDLQEDACYNCGR GFQFVSSSLPDICYRCGESGHLAKDCDLQE KDCDLQEDACYNCGRGGHIAKDCKEPKRER R C G G R G 2 1 1 3 4 1 2 3 1 0 2 1 0 0 0 1 0 0 1 0 0 0 23 1 2714.0578 P62633 P62633 57 79 CNBP Cellular nucleic acid-binding protein yes yes 4 0.0075549 65.287 By MS/MS 9 0 1 1 668520 668520 0 1890 1163 1951 4579 3859 3859 1 13157 0 CGESGHLAR VAINCSKTSEVNCYRCGESGHLARECTIEA EVNCYRCGESGHLARECTIEATA_______ R C G A R E 1 1 0 0 1 0 1 2 1 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 985.43996 P62633 P62633 161 169 CNBP Cellular nucleic acid-binding protein yes yes 2;3 0.00094065 118.74 By MS/MS 9.5 0.5 2 2 4 9674500 9674500 0 1891 1163 1952 4580;4581;4582;4583 3860;3861;3862 3861 3 233450 0 CGETGHVAINCSK FGHIQKDCTKVKCYRCGETGHVAINCSKTS YRCGETGHVAINCSKTSEVNCYRCGESGHL R C G S K T 1 0 1 0 2 0 1 2 1 1 0 1 0 0 0 1 1 0 0 1 0 0 13 0 1431.6235 P62633 P62633 140 152 CNBP Cellular nucleic acid-binding protein yes yes 2 1.7027E-05 191.33 By MS/MS 9.5 0.5 1 1 2 1813100 1813100 0 1892 1163 1953 4584;4585 3863;3864 3863 2 56773 0 CGFAGETGPR EKTAVVIDLGEAFTKCGFAGETGPRCIIPS EAFTKCGFAGETGPRCIIPSVIKRAGMPKP K C G P R C 1 1 0 0 1 0 1 3 0 0 0 0 0 1 1 0 1 0 0 0 0 0 10 0 1050.4553 Q9NZ32 Q9NZ32 27 36 ACTR10 Actin-related protein 10 yes yes 2 0.0063169 102.62 By MS/MS 7 0 1 1 537220 537220 0 1893 2643 1954 4586 3865 3865 1 8433.4 0 CGFCHVGEEENEAR DRSPHRSSPSDTRPKCGFCHVGEEENEARG KCGFCHVGEEENEARGKLHIFNAKKAAAHY K C G A R G 1 1 1 0 2 0 4 2 1 0 0 0 0 1 0 0 0 0 0 1 0 0 14 0 1692.6621 Q8IWS0 Q8IWS0 212 225 PHF6 PHD finger protein 6 yes yes 3 0.00019814 172.33 By MS/MS 7 0 1 1 546660 546660 0 1894 1869 1955 4587 3866 3866 1 8581.5 0 CGHTNNLRPK YARLHPRAVNCRKKKCGHTNNLRPKKKVK_ CRKKKCGHTNNLRPKKKVK___________ K C G P K K 0 1 2 0 1 0 0 1 1 0 1 1 0 0 1 0 1 0 0 0 0 0 10 1 1195.588 P62987 P62987 115 124 UBA52 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 yes yes 2;3 0.00014159 162.25 By MS/MS 10 0 2 2 963540 963540 0 1895 1191 1956 4588;4589 3867;3868 3868 2 51931 0 CGLALALNK GRVISESPPDQWEARCGLALALNKLSQYLD DQWEARCGLALALNKLSQYLDSSQVKPLFQ R C G N K L 2 0 1 0 1 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 958.52699 Q92616 Q92616 1235 1243 GCN1L1 Translational activator GCN1 yes yes 2 0.00041232 149.4 By MS/MS 2.5 0.5 1 1 2 2286300 2286300 0 1896 2064 1957 4590;4591 3869;3870 3869 2 568720 0 CGLDLIVQAK ERPSPVQLKAIPLGRCGLDLIVQAKSGTGK IPLGRCGLDLIVQAKSGTGKTCVFSTIALD R C G A K S 1 0 0 1 1 1 0 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1115.6009 Q9UHI6 Q9UHI6 98 107 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 2 0.005029 105.52 By MS/MS 4 0 1 1 577420 577420 0 1897 2731 1958 4592 3871 3871 1 54339 0 CGLDNTK GPSVYLERLKILRQRCGLDNTKQDDRPPLT RLKILRQRCGLDNTKQDDRPPLTSLLSKPA R C G T K Q 0 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 806.35925 Q14008 Q14008 1946 1952 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.012205 129.68 By MS/MS 2 0 1 1 371830 371830 0 1898 1417 1959 4593 3872 3872 1 125770 0 CGLLLDR TEDGTAVASVGKGQRCGLLLDRTNFYAEQG ASVGKGQRCGLLLDRTNFYAEQGGQASDRG R C G D R T 0 1 0 1 1 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 845.44292 Q5JTZ9 Q5JTZ9 555 561 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.026402 107.43 By MS/MS 4 0 1 1 1847900 1847900 0 1899 1613 1960 4594 3873 3873 1 173900 0 CGLQFLGNIASR RELRVEQESLLTAFRCGLQFLGNIASRNED AFRCGLQFLGNIASRNEDSQSIVWVHAFPE R C G S R N 1 1 1 0 1 1 0 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 12 0 1334.6765 Q9UBB4 Q9UBB4 134 145 ATXN10 Ataxin-10 yes yes 2 0.00021767 149.33 By MS/MS 7 0 1 1 360060 360060 0 1900 2693 1961 4595 3874 3874 1 5652.2 0 CGPITSTTR NPDDLREEIVKAGLKCGPITSTTRFIFEKK VKAGLKCGPITSTTRFIFEKKLAQALLEQG K C G T R F 0 1 0 0 1 0 0 1 0 1 0 0 0 0 1 1 3 0 0 0 0 0 9 0 991.47568 Q86XL3 Q86XL3 91 99 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.031896 83.783 By MS/MS 4 0 1 1 1070300 1070300 0 1901 1845 1962 4596 3875 3875 1 100720 0 CGPMVLDALIK GDKPHMQTYEVDLNKCGPMVLDALIKIKNE DLNKCGPMVLDALIKIKNEVDSTLTFRRSC K C G I K I 1 0 0 1 1 0 0 1 0 1 2 1 1 0 1 0 0 0 0 1 0 0 11 0 1215.6356 P21912 P21912 68 78 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.00063532 128.86 By MS/MS 8 0 2 2 380830 380830 0 1902 683 1963;1964 4597;4598 3876;3877 3877 344 2 4808 0 CGSEDTAPVIIFVSK SFPPETQALKAAFMKCGSEDTAPVIIFVSK CGSEDTAPVIIFVSKMFAVDAKALPQNKPR K C G S K M 1 0 0 1 1 0 1 1 0 2 0 1 0 1 1 2 1 0 0 2 0 0 15 0 1621.8022 Q7Z2Z2 Q7Z2Z2 402 416 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 2 0.038136 96.82 By MS/MS 3 0 1 1 166470 166470 0 1903 1780 1965 4599 3878 3878 0 3046 0 CGSVLVR KIGKPHTVPCKVTGRCGSVLVRLIPAPRGT VPCKVTGRCGSVLVRLIPAPRGTGIVSAPV R C G V R L 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 789.41671 P15880 P15880 188 194 RPS2 40S ribosomal protein S2 yes yes 2 0.014857 122.79 By MS/MS By matching 8 0 2 1 1 29347000 29264000 83307 1904 627 1966 4600;4601 3879 3879 1 369460 112420 CGTFGATSLQQR DLKLLREIEKAKPIKCGTFGATSLQQRYLA PIKCGTFGATSLQQRYLATGDFGGNLHIWN K C G Q R Y 1 1 0 0 1 2 0 2 0 0 1 0 0 1 0 1 2 0 0 0 0 0 12 0 1324.6194 Q96MX6 Q96MX6 70 81 WDR92 WD repeat-containing protein 92 yes yes 2 0.0015517 114.89 By MS/MS 7 0 1 1 1159300 1159300 0 1905 2198 1967 4602 3880 3880 1 18199 0 CGTGIVGVFVK AASIGNAQKLPMCDKCGTGIVGVFVKLRDR MCDKCGTGIVGVFVKLRDRHRHPECYVCTD K C G V K L 0 0 0 0 1 0 0 3 0 1 0 1 0 1 0 0 1 0 0 3 0 0 11 0 1135.606 O00151 O00151 263 273 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.00017035 145.72 By MS/MS 7 0 1 1 1051400 1051400 0 1906 84 1968 4603 3881 3881 1 16505 0 CGVISPR RAGKIVVNLTGRLNKCGVISPRFDVQLKDL NLTGRLNKCGVISPRFDVQLKDLEKWQNNL K C G P R F 0 1 0 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 7 0 787.40106 P62244 P62244 72 78 RPS15A 40S ribosomal protein S15a yes yes 2 0.047025 91.906 By MS/MS By matching 10 0 2 1 1 6780400 6734100 46296 1907 1144 1969 4604;4605 3882 3882 1 362940 59272 CGVLGALR YLREADFARVAHLTRCGVLGALRELRAHTV RVAHLTRCGVLGALRELRAHTVLAASCARH R C G L R E 1 1 0 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 844.45891 Q8WUY1 Q8WUY1 85 92 THEM6 Protein THEM6 yes yes 2 0.026713 92.191 By MS/MS 9 0 1 1 1659000 1659000 0 1908 2019 1970 4606 3883 3883 1 32650 0 CHQPLAR HPQRQNVAVNELCGRCHQPLARAQPAVRAL AVNELCGRCHQPLARAQPAVRALGQLFHIA R C H A R A 1 1 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 7 0 880.43375 Q15942 Q15942 387 393 ZYX Zyxin yes yes 2 0.044784 93.593 By MS/MS 5.5 0.5 1 1 2 1226300 1226300 0 1909 1541 1971 4607;4608 3884 3884 1 11841 0 CIAVGESDGSIWNPDGIDPK VGLHSMRYLHRFGAKCIAVGESDGSIWNPD ESDGSIWNPDGIDPKELEDFKLQHGSILGF K C I P K E 1 0 1 3 1 0 1 3 0 3 0 1 0 0 2 2 0 1 0 1 0 0 20 0 2128.9735 P00367;P49448 P00367 327 346 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 2.2629E-18 249.41 By MS/MS 6 0 1 1 1053400 1053400 0 1910 441 1972 4609 3885 3885 1 7241.1 0 CIDHYTK NVNDNSEYVETIIAKCIDHYTKQCVENADL YVETIIAKCIDHYTKQCVENADLPEGEKKP K C I T K Q 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 935.4171 Q99460 Q99460 104 110 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 0.015692 120.62 By MS/MS 4 0 2 2 2196800 2196800 0 1911 2246 1973 4610;4611 3886;3887 3886 2 206730 0 CIDLEPDNATTYVHK TDQQQFGKADEMYDKCIDLEPDNATTYVHK CIDLEPDNATTYVHKGLLQLQWKQDLDRGL K C I H K G 1 0 1 2 1 0 1 0 1 1 1 1 0 0 1 0 2 0 1 1 0 0 15 0 1774.8196 O94826 O94826 502 516 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.030027 73.722 By MS/MS 5 0 1 1 2048300 2048300 0 1912 369 1974 4612 3888 3888 1 20543 0 CIELCCGSVK KRAVAGDASESALLKCIELCCGSVKEMRER SALLKCIELCCGSVKEMRERYAKIVEIPFN K C I V K E 0 0 0 0 3 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1224.5301 P05023 P05023 459 468 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 3.016E-05 161.27 By MS/MS 3 1.41 1 1 1 1 1 5 5591400 5591400 0 1913 481 1975 4613;4614;4615;4616;4617 3889;3890;3891;3892;3893 3893 5 877800 0 CIGKPGGSLDNSEQK AQELLQRMTDKCFRKCIGKPGGSLDNSEQK CIGKPGGSLDNSEQKCIAMCMDRYMDAWNT K C I Q K C 0 0 1 1 1 1 1 3 0 1 1 2 0 0 1 2 0 0 0 0 0 0 15 1 1588.7515 Q9Y5L4 Q9Y5L4 50 64 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 3 0.025378 91.307 By MS/MS 10 0 1 1 1111700 1111700 0 1914 2916 1976 4618 3894 3894 1 59916 0 CIHPADIPAAR VGATYVERAQILLERCIHPADIPAARLGEM LLERCIHPADIPAARLGEMIETAYGENFAC R C I A R L 3 1 0 1 1 0 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 11 0 1219.6132 Q8IYQ7 Q8IYQ7 299 309 THNSL1 Threonine synthase-like 1 yes yes 3 0.036669 85.29 By MS/MS 5 0 1 1 622730 622730 0 1915 1888 1977 4619 3895 3895 1 6245.6 0 CIINNTHR LTDEAVSGWKFEIHRCIINNTHRLVELCVA WKFEIHRCIINNTHRLVELCVAKLSQDWFP R C I H R L 0 1 2 0 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 8 0 1026.5029 Q93008;O00507 Q93008 147 154 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.027748 91.041 By MS/MS 2.33 1.25 1 1 1 3 615850 615850 0 1916 2085 1978 4620;4621;4622 3896 3896 1 145340 0 CIIPSVIK EAFTKCGFAGETGPRCIIPSVIKRAGMPKP AGETGPRCIIPSVIKRAGMPKPVRVVQYNI R C I I K R 0 0 0 0 1 0 0 0 0 3 0 1 0 0 1 1 0 0 0 1 0 0 8 0 928.54157 Q9NZ32 Q9NZ32 37 44 ACTR10 Actin-related protein 10 yes yes 2 0.009037 111.82 By MS/MS 7 0 1 1 450200 450200 0 1917 2643 1979 4623 3897 3897 1 7067.3 0 CILPFDK SQLKEHFAQFGHVRRCILPFDKETGFHRGL AQFGHVRRCILPFDKETGFHRGLGWVQFSS R C I D K E 0 0 0 1 1 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 7 0 891.45242 Q9GZT3 Q9GZT3 48 54 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.016696 118.01 By MS/MS 10 0 1 1 675150 675150 0 1918 2398 1980 4624 3898 3898 1 36388 0 CILVASPGFVR VVQAIQRHIHFDVVKCILVASPGFVREQFC DVVKCILVASPGFVREQFCDYLFQQAVKTD K C I V R E 1 1 0 0 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 2 0 0 11 0 1217.6591 Q9BRX2 Q9BRX2 204 214 PELO Protein pelota homolog yes yes 2 0.024299 98.033 By MS/MS 7 0 1 1 770770 770770 0 1919 2301 1981 4625 3899 3899 1 12100 0 CIPALDSLTPANEDQK VEEGIVLGGGCALLRCIPALDSLTPANEDQ IPALDSLTPANEDQKIGIEIIKRTLKIPAM R C I Q K I 2 0 1 2 1 1 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 16 0 1770.8458 P10809 P10809 447 462 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 7.6457E-11 229.56 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 25487000 25487000 0 1920 569 1982 4626;4627;4628;4629;4630;4631 3900;3901;3902;3903;3904;3905 3900 5 194600 0 CISIALK ______________________________ SNKDEAERCISIALKAIQSNQPDRALRFLE R C I L K A 1 0 0 0 1 0 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 7 0 803.45751 Q9NXW2 Q9NXW2 11 17 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.03963 97.473 By MS/MS 7 0 1 1 1191100 1191100 0 1921 2630 1983 4632 3906 3906 1 18698 0 CIYNLLQSSSPAVK KVCHANPSERARFIRCIYNLLQSSSPAVKY RCIYNLLQSSSPAVKYEAAGTLVTLSSAPT R C I V K Y 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 3 0 0 1 1 0 0 14 0 1578.8076 P53618 P53618 248 261 COPB1 Coatomer subunit beta yes yes 2 3.3529E-24 286.45 By MS/MS 4 0 1 1 3524700 3524700 0 1922 1033 1984 4633 3907 3907 1 331700 0 CKDGVVFGVEK AMKAVENSSTAIGIRCKDGVVFGVEKLVLS IGIRCKDGVVFGVEKLVLSKLYEEGSNKRL R C K E K L 0 0 0 1 1 0 1 2 0 0 0 2 0 1 0 0 0 0 0 3 0 0 11 1 1236.6173 P25788 P25788 42 52 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.016485 108.31 By MS/MS 7.5 0.5 1 1 2 1834200 1834200 0 1923 726 1985 4634;4635 3908 3908 1 24107 0 CKDISSALR CQVVRLDDCGLTEARCKDISSALRVNPALA GLTEARCKDISSALRVNPALAELNLRSNEL R C K L R V 1 1 0 1 1 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 9 1 1048.5335 P13489 P13489 45 53 RNH1 Ribonuclease inhibitor yes yes 2;3 0.0052827 133.13 By MS/MS 7 0 2 2 845620 845620 0 1924 601 1986 4636;4637 3909;3910 3909 2 13275 0 CKELGITALHIK SPYAAMLAAQDVAQRCKELGITALHIKLRA AQRCKELGITALHIKLRATGGNRTKTPGPG R C K I K L 1 0 0 0 1 0 1 1 1 2 2 2 0 0 0 0 1 0 0 0 0 0 12 1 1381.7752 P62263 P62263 85 96 RPS14 40S ribosomal protein S14 yes yes 2;3;4 3.3092E-05 182.92 By MS/MS 10 0 3 3 7690600 7690600 0 1925 1147 1987 4638;4639;4640 3911;3912;3913 3913 3 414500 0 CKHFELGGDK VEPNCRSKRMLAIKRCKHFELGGDKKRKGQ LAIKRCKHFELGGDKKRKGQVIQF______ R C K D K K 0 0 0 1 1 0 1 2 1 0 1 2 0 1 0 0 0 0 0 0 0 0 10 1 1189.555 P83881 P83881 88 97 RPL36A 60S ribosomal protein L36a no no 3 0.029227 97.597 By MS/MS 9.5 0.5 1 1 2 1208200 1208200 0 1926 1242 1988 4641;4642 3914 3914 1 60041 0 CKHFELGGDKK VEPNCRSKRMLAIKRCKHFELGGDKKRKGQ AIKRCKHFELGGDKKRKGQVIQF_______ R C K K K R 0 0 0 1 1 0 1 2 1 0 1 3 0 1 0 0 0 0 0 0 0 0 11 2 1317.65 P83881 P83881 88 98 RPL36A 60S ribosomal protein L36a no no 3 0.019936 115.29 By MS/MS 10 0 1 1 377260 377260 0 1927 1242 1989 4643 3915 3915 1 20333 0 CKIQPHPR MSSNNGCMRDPTLYRCKIQPHPRTGNKYNV RDPTLYRCKIQPHPRTGNKYNVYPTYDFAC R C K P R T 0 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 0 8 1 1034.5444 P07814 P07814 359 366 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.034986 104.37 By MS/MS 3 0 1 1 366080 366080 0 1928 512 1990 4644 3916 3916 1 6698.2 0 CLAENAGDVAFVK PNSNERYYGYTGAFRCLAENAGDVAFVKDV FRCLAENAGDVAFVKDVTVLQNTDGNNNEA R C L V K D 3 0 1 1 1 0 1 1 0 0 1 1 0 1 0 0 0 0 0 2 0 0 13 0 1392.6708 P02788 P02788 553 565 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 2.5849E-10 206.36 By MS/MS 2.5 1.5 1 1 2 219310 0 219310 1929 459 1991 4645;4646 3917;3918 3917 2 0 346350 CLAENAVYLCDR GQLWLCAPQAKQIWKCLAENAVYLCDREAC IWKCLAENAVYLCDREACFKWYSKLMGDEP K C L D R E 2 1 1 1 2 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 12 0 1482.6595 Q93008;O00507 Q93008 683 694 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 1.3139E-12 236.22 By MS/MS 3 1.41 1 1 1 1 1 5 3713600 3713600 0 1930 2085 1992 4647;4648;4649;4650;4651 3919;3920 3919 2 794080 0 CLALATHDNPLR MSVIREWGSGSDTLRCLALATHDNPLRREE TLRCLALATHDNPLRREEMHLEDSANFIKY R C L L R R 2 1 1 1 1 0 0 0 1 0 3 0 0 0 1 0 1 0 0 0 0 0 12 0 1379.698 P16615 P16615 560 571 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.0070918 97.456 By MS/MS 2.5 0.5 1 1 2 849130 849130 0 1931 635 1993 4652;4653 3921 3921 1 222770 0 CLATHGR VLNSLAEEKLQASVRCLATHGRFLEIGKFD EKLQASVRCLATHGRFLEIGKFDLSQNHPL R C L G R F 1 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 813.39156 P49327 P49327 1759 1765 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.017961 114.72 By MS/MS 3 1.41 1 1 1 1 1 5 5204200 5204200 0 1932 946 1994 4654;4655;4656;4657;4658 3922;3923;3924;3925 3924 4 1159100 0 CLDSYLR DKFWCQVIFDETLQKCLDSYLRYVPRKFDE IFDETLQKCLDSYLRYVPRKFDEGVASAPE K C L L R Y 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 7 0 925.43275 Q9H1I8 Q9H1I8 90 96 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.039458 97.602 By MS/MS 4 0 1 1 722370 722370 0 1933 2422 1995 4659 3926 3926 1 67980 0 CLEDENAR ERLKQLIDKETNDRKCLEDENARLQRVQYD KETNDRKCLEDENARLQRVQYDLQKANSSA K C L A R L 1 1 1 1 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1005.4186 P15924 P15924 1499 1506 DSP Desmoplakin yes yes 2 0.021068 98.458 By MS/MS 2 0 1 1 246950 246950 0 1934 628 1996 4660 3927 3927 1 83528 0 CLEEFELLGK IRTIRNAMKIRDVTKCLEEFELLGKAYGKA RDVTKCLEEFELLGKAYGKAKSIVDKEGVP K C L G K A 0 0 0 0 1 0 3 1 0 0 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1236.606 Q99613;B5ME19 Q99613 79 88 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 7.3253E-08 195.32 By MS/MS 5.3 2.9 1 1 1 2 1 1 1 1 1 10 62451000 62451000 0 1935 2252 1997 4661;4662;4663;4664;4665;4666;4667;4668;4669;4670 3928;3929;3930;3931;3932;3933;3934;3935;3936;3937;3938;3939 3928 12 5027600 0 CLEEGKLVNK KEFMLCRWEEKDPRRCLEEGKLVNKCALDF KDPRRCLEEGKLVNKCALDFFRQIKRHCAE R C L N K C 0 0 1 0 1 0 2 1 0 0 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1188.6173 P51970 P51970 56 65 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2;3 0.00075355 150.36 By MS/MS 9.33 0.471 2 1 3 1172200 1172200 0 1936 1010 1998 4671;4672;4673 3940;3941 3941 2 25622 0 CLEEQGLK ERHRHRFEVNPVWKKCLEEQGLKFVGQDVE VNPVWKKCLEEQGLKFVGQDVEGERMEIVE K C L L K F 0 0 0 0 1 1 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 975.46953 P17812 P17812 491 498 CTPS1 CTP synthase 1 yes yes 2 0.044696 84.498 By MS/MS 5 0 1 1 590740 590740 0 1937 645 1999 4674 3942 3942 1 5924.8 0 CLEKEVAALCR LVIGSSTLFSALLIKCLEKEVAALCRYTPR LLIKCLEKEVAALCRYTPRRNIPPYFVALV K C L C R Y 2 1 0 0 2 0 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 1 1347.6639 P12956 P12956 389 399 XRCC6 X-ray repair cross-complementing protein 6 yes yes 3 0.0034959 102.53 By MS/MS 5 0 1 1 1404900 1404900 0 1938 596 2000 4675 3943 3943 1 14090 0 CLELFSELAEDK QSKILKVIRKNIVKKCLELFSELAEDKENY VKKCLELFSELAEDKENYKKFYEAFSKNLK K C L D K E 1 0 0 1 1 0 3 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 12 0 1452.6806 P08238 P08238 412 423 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 6.3332E-13 242.49 By MS/MS 4.5 0.5 1 1 2 377180 377180 0 1939 521 2001 4676;4677 3944;3945 3945 2 28133 0 CLELFTELAEDK QSKILKVIRKNLVKKCLELFTELAEDKENY VKKCLELFTELAEDKENYKKFYEQFSKNIK K C L D K E 1 0 0 1 1 0 3 0 0 0 3 1 0 1 0 0 1 0 0 0 0 0 12 0 1466.6963 P07900 P07900 420 431 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0010649 123.96 By MS/MS 4 0 1 1 93235 93235 0 1940 513 2002 4678 3946;3947 3946 2 8774.1 0 CLEPTVALLR EQSPPGSATLGSHTKCLEPTVALLRWLSQP GSHTKCLEPTVALLRWLSQPLDGSENCSVL K C L L R W 1 1 0 0 1 0 1 0 0 0 3 0 0 0 1 0 1 0 0 1 0 0 10 0 1170.6431 Q8TCG1 Q8TCG1 337 346 KIAA1524 Protein CIP2A yes yes 2 0.0051869 114.89 By MS/MS 4 0 1 1 1906300 1906300 0 1941 1990 2003 4679 3948 3948 1 179400 0 CLGHPEEFYNLVR ______________________________ VKCLGHPEEFYNLVRFRIGGKRKVMPKMDQ K C L V R F 0 1 1 0 1 0 2 1 1 0 2 0 0 1 1 0 0 0 1 1 0 0 13 0 1632.7719 P37268 P37268 6 18 FDFT1 Squalene synthase yes yes 2;3 0.00017791 161.94 By MS/MS 7 0 2 2 1920600 1920600 0 1942 845 2004 4680;4681 3949;3950 3949 2 30150 0 CLHPLANETFVAK YKNRFWHDTCFRCAKCLHPLANETFVAKDN AKCLHPLANETFVAKDNKILCNKCTTREDS K C L A K D 2 0 1 0 1 0 1 0 1 0 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1498.7602 Q13642 Q13642 71 83 FHL1 Four and a half LIM domains protein 1 yes yes 2;3 0.00010315 171.32 By MS/MS 8.8 0.748 2 2 1 5 5078700 5078700 0 1943 1407 2005 4682;4683;4684;4685;4686 3951;3952 3951 2 74057 0 CLHPLANETFVAKDNK YKNRFWHDTCFRCAKCLHPLANETFVAKDN LHPLANETFVAKDNKILCNKCTTREDSPKC K C L N K I 2 0 2 1 1 0 1 0 1 0 2 2 0 1 1 0 1 0 0 1 0 0 16 1 1855.9251 Q13642 Q13642 71 86 FHL1 Four and a half LIM domains protein 1 yes yes 3 0.0081339 87.824 By MS/MS 8 0 1 1 719590 719590 0 1944 1407 2006 4687 3953 3953 1 9084.8 0 CLIATGGTPR NMVKLNDGSQITYEKCLIATGGTPRSLSAI ITYEKCLIATGGTPRSLSAIDRAGAEVKSR K C L P R S 1 1 0 0 1 0 0 2 0 1 1 0 0 0 1 0 2 0 0 0 0 0 10 0 1044.5386 O95831 O95831 256 265 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.0002553 143.37 By MS/MS 6 0.816 1 1 1 3 20019000 20019000 0 1945 429 2007 4688;4689;4690 3954;3955 3954 2 193650 0 CLIFPLIVTGQR LPWWGAIAACTVFARCLIFPLIVTGQREAA FARCLIFPLIVTGQREAARIHNHLPEIQKF R C L Q R E 0 1 0 0 1 1 0 1 0 2 2 0 0 1 1 0 1 0 0 1 0 0 12 0 1415.7959 Q15070 Q15070 153 164 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.002246 111.61 By MS/MS 7 0 1 1 580930 580930 0 1946 1487 2008 4691 3956;3957 3956 2 9119.5 0 CLMDQATDPNILGR AQEPESGLSEETQVKCLMDQATDPNILGRT KCLMDQATDPNILGRTWEGWEPWM______ K C L G R T 1 1 1 2 1 1 0 1 0 1 2 0 1 0 1 0 1 0 0 0 0 0 14 0 1602.7494 P78527 P78527 4106 4119 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.817E-24 289.59 By MS/MS 1.8 0.748 2 2 1 5 1174600 1174600 0 1947 1225 2009;2010 4692;4693;4694;4695;4696 3958;3959;3960;3961 3961 718 4 319200 0 CLNNLAASQLK MTFEEEAQLLQLKVKCLNNLAASQLKLDHY LKVKCLNNLAASQLKLDHYRAALRSCSLVL K C L L K L 2 0 2 0 1 1 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1230.6391 Q14318 Q14318 274 284 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.00027548 136.52 By MS/MS 6 0 1 1 6679100 6679100 0 1948 1438 2011 4697 3962 3962 1 45914 0 CLQEGAEISSPAVER QCQEVLHHISMIPAKCLQEGAEISSPAVER CLQEGAEISSPAVERLISSLLRTCDLEEFQ K C L E R L 2 1 0 0 1 1 3 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 15 0 1644.7777 Q9BQ52 Q9BQ52 609 623 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 8.0451E-33 301.38 By MS/MS 4 0 1 1 1248300 1248300 0 1949 2283 2012 4698 3963 3963 1 117470 0 CLQNPSSDIR GGGQLPAKLSSLFVKCLQNPSSDIRLVAEK SLFVKCLQNPSSDIRLVAEKMIWWANKDPL K C L I R L 0 1 1 1 1 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 10 0 1188.5557 Q92616 Q92616 2558 2567 GCN1L1 Translational activator GCN1 yes yes 2 0.0002702 142.36 By MS/MS 2 0 1 1 1118700 1118700 0 1950 2064 2013 4699 3964 3964 1 378390 0 CLQTLLDTK VLLDALTDPSRKTQKCLQTLLDTKFVHFID SRKTQKCLQTLLDTKFVHFIDAPSLALIMP K C L T K F 0 0 0 1 1 1 0 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 9 0 1090.5692 Q92616 Q92616 1595 1603 GCN1L1 Translational activator GCN1 yes yes 2 7.3044E-07 185.81 By MS/MS 2.5 0.5 1 1 2 1534200 1534200 0 1951 2064 2014 4700;4701 3965;3966 3965 2 390390 0 CLSDPAEGCR FQGPWARLLLPRLLRCLSDPAEGCRALAVH PRLLRCLSDPAEGCRALAVHLLDLGLRRAA R C L C R A 1 1 0 1 2 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1163.4699 Q86Y56 Q86Y56 84 93 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.0040636 107.69 By MS/MS 4 0 1 1 667910 667910 0 1952 1850 2015 4702 3967 3967 1 62855 0 CLSEQIADAYSSFR ILLLTAARDAEEALRCLSEQIADAYSSFRS RCLSEQIADAYSSFRSVRAIRIDGTDKATQ R C L F R S 2 1 0 1 1 1 1 0 0 1 1 0 0 1 0 3 0 0 1 0 0 0 14 0 1645.7406 Q5JTV8 Q5JTV8 424 437 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 4.7937E-11 232.6 By MS/MS 6 0 1 1 1188400 1188400 0 1953 1611 2016 4703 3968 3968 1 8169.2 0 CLSHHVADAYTSSQK TIIFTAAREGRETLKCLSHHVADAYTSSQK CLSHHVADAYTSSQKVSPIQIDGAGRTWQD K C L Q K V 2 0 0 1 1 1 0 0 2 0 1 1 0 0 0 3 1 0 1 1 0 0 15 0 1702.7733 Q8NFQ8 Q8NFQ8 310 324 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 3 0.00045391 132.31 By MS/MS 5 0 1 1 1722400 1722400 0 1954 1965 2017 4704 3969 3969 1 17275 0 CLSQQADVR ANETFCLEIMDSLRRCLSQQADVRLMLYEG MDSLRRCLSQQADVRLMLYEGFYDVLRRNS R C L V R L 1 1 0 1 1 2 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1075.508 Q9NVI1 Q9NVI1 594 602 FANCI Fanconi anemia group I protein yes yes 2 0.00098301 134.23 By MS/MS 3 0 1 1 1009500 1009500 0 1955 2597 2018 4705 3970 3970 1 18471 0 CLSSLKDER YGVPVTLIGEAVFARCLSSLKDERIQASKK EAVFARCLSSLKDERIQASKKLKGPQKFQF R C L E R I 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 9 1 1106.539 P52209 P52209 289 297 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.0063119 125.82 By MS/MS 6 0 1 1 0 0 0 1956 1011 2019 4706 3971 3971 1 0 0 CLTGLAVGLR VGKDTNVMLVALAAKCLTGLAVGLRKKFGQ ALAAKCLTGLAVGLRKKFGQYAGHVVPTIL K C L L R K 1 1 0 0 1 0 0 2 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1058.5906 Q14008 Q14008 343 352 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 7.7841E-06 175.91 By MS/MS 2 0 1 1 733220 733220 0 1957 1417 2020 4707 3972 3972 1 248000 0 CLYALEEGIVR FRWHPGAHVGVGKNKCLYALEEGIVRYTKE GKNKCLYALEEGIVRYTKEVYVPHPRNTEA K C L V R Y 1 1 0 0 1 0 2 1 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1321.67 Q9P0M9 Q9P0M9 88 98 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 0.000251 138.66 By MS/MS 10 0 1 1 912510 912510 0 1958 2666 2021 4708 3973 3973 1 49181 0 CLYAQLVQQR FLPETRIMTSVTFTKCLYAQLVQQRFVPDR VTFTKCLYAQLVQQRFVPDRRSGYRLPPPS K C L Q R F 1 1 0 0 1 3 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 10 0 1277.655 O95905 O95905 267 276 ECD Protein SGT1 yes yes 2 6.0901E-08 221.53 By MS/MS 5 0 1 1 0 0 0 1959 433 2022 4709 3974 3974 1 0 0 CLYASVLTAQPR AIHRGGGQIIPTARRCLYASVLTAQPRLME ARRCLYASVLTAQPRLMEPIYLVEIQCPEQ R C L P R L 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 12 0 1377.7075 P13639 P13639 728 739 EEF2 Elongation factor 2 yes yes 2 7.3045E-18 255.07 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 25209000 25209000 0 1960 602 2023 4710;4711;4712;4713;4714;4715 3975;3976;3977;3978 3976 4 1960100 0 CMIDQAHQEERPIR KALTNLPHTDFTLCKCMIDQAHQEERPIRQ KCMIDQAHQEERPIRQILYLGDLLETCHFQ K C M I R Q 1 2 0 1 1 2 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 14 1 1781.8301 Q9UBQ5 Q9UBQ5 87 100 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 3;4 0.00067078 124.12 By MS/MS 8.6 0.49 2 3 5 6812700 6812700 0 1961 2703 2024;2025 4716;4717;4718;4719;4720 3979;3980;3981;3982;3983 3980 1148 5 129190 0 CMMDTDDEVRDR QNESLLPSILVLLQRCMMDTDDEVRDRATF LQRCMMDTDDEVRDRATFYLNVLQQRQMAL R C M D R A 0 2 0 4 1 0 1 0 0 0 0 0 2 0 0 0 1 0 0 1 0 0 12 1 1541.5909 Q9UBF2 Q9UBF2 516 527 COPG2 Coatomer subunit gamma-2 yes yes 3 0.0051481 94.409 By MS/MS 4 0 1 1 682580 682580 0 1962 2697 2026 4721 3984 3984 1 64236 0 CMQLTDFILK DGPCTQVRRQAMPFKCMQLTDFILKFPHSA AMPFKCMQLTDFILKFPHSAHQKYVRQAWQ K C M L K F 0 0 0 1 1 1 0 0 0 1 2 1 1 1 0 0 1 0 0 0 0 0 10 0 1267.6305 P50914 P50914 54 63 RPL14 60S ribosomal protein L14 yes yes 2 3.1552E-07 177.3 By MS/MS 8 0 2 2 193770 193770 0 1963 983 2027;2028 4722;4723 3985;3986 3986 532 2 2446.4 0 CMTNTPVVVR EKKLSAFRPAPRVIRCMTNTPVVVREGATV PRVIRCMTNTPVVVREGATVYATGTHAQVE R C M V R E 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 2 0 0 3 0 0 10 0 1175.5791 P32322 P32322 120 129 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 0.00025189 143.03 By MS/MS 8 0 1 1 1206600 1206600 0 1964 797 2029 4724 3987 3987 391 1 15233 0 CNEIINWLDK QGKINDEDKQKILDKCNEIINWLDKNQTAE KILDKCNEIINWLDKNQTAEKEEFEHQQKE K C N D K N 0 0 2 1 1 0 1 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1303.6231 P11142 P11142 574 583 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 7.1977E-11 219.03 By MS/MS 5 0 1 1 943180 943180 0 1965 572 2030 4725 3988 3988 1 9459.6 0 CNELQDIEK TPEEVIEYSAVFWERCNELQDIEKIMAQIE AVFWERCNELQDIEKIMAQIERGEARIQRR R C N E K I 0 0 1 1 1 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1147.5179 O60264;P28370 O60264 891 899 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 7.784E-05 166.34 By MS/MS 3 0 1 1 830760 830760 0 1966 251;755 2031 4726 3989 3989 1 15201 0 CNEPAVWSQLAK EHIGNLDRAYEFAERCNEPAVWSQLAKAQL AERCNEPAVWSQLAKAQLQKGMVKEAIDSY R C N A K A 2 0 1 0 1 1 1 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 12 0 1401.6711 Q00610 Q00610 1102 1113 CLTC Clathrin heavy chain 1 yes yes 2 1.8527E-08 206.1 By MS/MS 2 0.816 1 1 1 3 634320 634320 0 1967 1262 2032 4727;4728;4729 3990;3991 3991 2 81496 0 CNEQPNRVEIYEK LYTWRSCSRAIPQVKCNEQPNRVEIYEKTV VKCNEQPNRVEIYEKTVEVLEPEVTKLMNF K C N E K T 0 1 2 0 1 1 3 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 13 1 1677.7781 Q7L576;Q96F07 Q7L576 98 110 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 3 0.0017376 110.31 By MS/MS 3 0 1 1 463180 463180 0 1968 1763 2033 4730 3992 3992 1 8474.9 0 CNGVLEGIR KAGKLDPHLVLDQLRCNGVLEGIRICRQGF VLDQLRCNGVLEGIRICRQGFPNRVVFQEF R C N I R I 0 1 1 0 1 0 1 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1016.5073 P35580;P12883;P13535;Q9UKX3;Q9Y623;P13533;P12882;P11055;Q9UKX2;A7E2Y1;P35579;Q7Z406 P35579 694 702 MYH10;MYH7;MYH8;MYH13;MYH4;MYH6;MYH1;MYH3;MYH2;MYH7B;MYH9;MYH14 Myosin-10;Myosin-7;Myosin-8;Myosin-13;Myosin-4;Myosin-6;Myosin-1;Myosin-3;Myosin-2;Myosin-7B;Myosin-9;Myosin-14 no no 2 0.0014259 128.6 By MS/MS 2 0 1 1 1108700 1108700 0 1969 824;825;1788 2034 4731 3993 3993 1 374990 0 CNLLAEK AATDCIAKEVVDPTKCNLLAEKQYGFCKGS KEVVDPTKCNLLAEKQYGFCKGSVIQKALG K C N E K Q 1 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 846.42694 CON__P12763;P02765 CON__P12763 219 225 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.015755 120.46 By MS/MS 5.5 0.5 1 1 2 2436600 2436600 0 + 1970 49 2035 4732;4733 3994 3994 1 18640 0 CNNVLYIR IDGALSGHLGEVLIRCNNVLYIRGVEEEEE LGEVLIRCNNVLYIRGVEEEEEDGEMRE__ R C N I R G 0 1 2 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 0 1050.528 P62306 P62306 66 73 SNRPF Small nuclear ribonucleoprotein F yes yes 2 0.00019768 170.73 By MS/MS 9.5 0.5 1 1 2 1161000 1161000 0 1971 1154 2036 4734;4735 3995 3995 1 57923 0 CNSLLPLDDIVR LAACTEGKNVYTEIKCNSLLPLDDIVRVVT EIKCNSLLPLDDIVRVVTHDDCIPEVKIAY K C N V R V 0 1 1 2 1 0 0 0 0 1 3 0 0 0 1 1 0 0 0 1 0 0 12 0 1413.7286 Q14571;Q14643 Q14571 1397 1408 ITPR2;ITPR1 Inositol 1,4,5-trisphosphate receptor type 2;Inositol 1,4,5-trisphosphate receptor type 1 yes no 2 0.01072 129.16 By MS/MS 2 0 1 1 0 0 0 1972 1445 2037 4736 3996 3996 1 0 0 CNTCGEPITDR GAPYCEGCYTDTLEKCNTCGEPITDRMLRA TLEKCNTCGEPITDRMLRATGKAYHPHCFT K C N D R M 0 1 1 1 2 0 1 1 0 1 0 0 0 0 1 0 2 0 0 0 0 0 11 0 1321.5391 Q15942 Q15942 444 454 ZYX Zyxin yes yes 2 6.5218E-10 232.88 By MS/MS 5 0 1 1 693700 693700 0 1973 1541 2038 4737 3997;3998 3998 2 6957.4 0 CNTDDTIGDLKK EVVCNDRLGKKVRVKCNTDDTIGDLKKLIA RVKCNTDDTIGDLKKLIAAQTGTRWNKIVL K C N K K L 0 0 1 3 1 0 0 1 0 1 1 2 0 0 0 0 2 0 0 0 0 0 12 1 1378.6398 Q9BZL1 Q9BZL1 18 29 UBL5 Ubiquitin-like protein 5 yes yes 3 0.00081504 116.71 By MS/MS 10 0 1 1 188560 188560 0 1974 2382 2039 4738 3999 3999 1 10163 0 CNTLITLIER DWFLKSRTAMELQRRCNTLITLIERENMEL ELQRRCNTLITLIERENMELEEKEKAEKKK R C N E R E 0 1 1 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 0 0 0 0 10 0 1231.6595 O60264 O60264 1001 1010 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 1.0888E-07 191.4 By MS/MS 3 0 1 1 73263 73263 0 1975 251 2040 4739 4000 4000 1 1340.5 0 CNTNTAIELK VEYKSAVEKKLAEYKCNTNTAIELKLVRFP LAEYKCNTNTAIELKLVRFPEDLENDIRTF K C N L K L 1 0 2 0 1 0 1 0 0 1 1 1 0 0 0 0 2 0 0 0 0 0 10 0 1162.5652 O14929 O14929 27 36 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.0004931 154.85 By MS/MS 7 0 1 1 489630 489630 0 1976 146 2041 4740 4001 4001 1 7686.4 0 CNTTVCLGK HFARLQAKDEQGPIRCNTTVCLGKIGSYLS EQGPIRCNTTVCLGKIGSYLSASTRHRVLT R C N G K I 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 9 0 1051.4791 Q96KG9 Q96KG9 446 454 SCYL1 N-terminal kinase-like protein yes yes 2 0.026965 106.68 By MS/MS 4 0 1 1 462390 462390 0 1977 2188 2042 4741 4002 4002 0 43514 0 CNVIITQPR QLLLERYVTEGRGARCNVIITQPRRISAVS EGRGARCNVIITQPRRISAVSVAQRVSHEL R C N P R R 0 1 1 0 1 1 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 9 0 1099.5808 Q7L2E3 Q7L2E3 484 492 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0022978 117.53 By MS/MS 3.5 0.5 1 1 2 3983200 3983200 0 1978 1761 2043 4742;4743 4003;4004 4004 2 115160 0 CPENAFFLDHVR IRRLIRGFVLRHAPRCPENAFFLDHVRTSF APRCPENAFFLDHVRTSFLLNLRRQLPQNV R C P V R T 1 1 1 1 1 0 1 0 1 0 1 0 0 2 1 0 0 0 0 1 0 0 12 0 1503.6929 O00159 O00159 802 813 MYO1C Unconventional myosin-Ic yes yes 3 0.00025637 190.36 By MS/MS 4 0 1 1 1790600 1790600 0 1979 85 2044 4744 4005 4005 1 168500 0 CPEPCPPPK CKQPCQPPPVCPAPKCPEPCPPPKCPEPCP VCPAPKCPEPCPPPKCPEPCPPSKCPQSCP K C P P K C 0 0 0 0 2 0 1 0 0 0 0 1 0 0 5 0 0 0 0 0 0 0 9 0 1080.4732 Q96RM1;P35326;P35325;P22532;P22531;Q9BYE4 Q96RM1 23 31 SPRR2F;SPRR2A;SPRR2B;SPRR2D;SPRR2E;SPRR2G Small proline-rich protein 2F;Small proline-rich protein 2A;Small proline-rich protein 2B;Small proline-rich protein 2D;Small proline-rich protein 2E;Small proline-rich protein 2G yes no 2 0.0068224 117.4 By MS/MS 5.33 3.09 1 1 1 3 89384 0 89384 1980 693 2045 4745;4746;4747 4006;4007 4007 2 0 140610 CPFIVALNK EPQTIESINLLKSKKCPFIVALNKIDRLYD LLKSKKCPFIVALNKIDRLYDWKKSPDSDV K C P N K I 1 0 1 0 1 0 0 0 0 1 1 1 0 1 1 0 0 0 0 1 0 0 9 0 1060.5739 O60841 O60841 749 757 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 0.00096649 134.44 By MS/MS 2 0 1 1 161800 161800 0 1981 283 2046 4748 4008 4008 1 54728 0 CPFLIPFETR ASGALPDWCEQLTSKCPFLIPFETRQLYFT QLTSKCPFLIPFETRQLYFTCTAFGASRAI K C P T R Q 0 1 0 0 1 0 1 0 0 1 1 0 0 2 2 0 1 0 0 0 0 0 10 0 1278.6431 Q9ULT8 Q9ULT8 2071 2080 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.007474 100.02 By MS/MS 3.67 1.25 1 1 1 3 280560 280560 0 1982 2774 2047 4749;4750;4751 4009;4010;4011;4012;4013 4011 5 48323 0 CPFTGNVSIR KTPKEAIEGTYIDKKCPFTGNVSIRGRILS YIDKKCPFTGNVSIRGRILSGVVTKMKMQR K C P I R G 0 1 1 0 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1149.5601 P62280 P62280 60 69 RPS11 40S ribosomal protein S11 yes yes 2 5.3138E-11 214.05 By MS/MS By matching 9 0 3 2 1 41445000 41333000 111390 1983 1152 2048 4752;4753;4754 4014;4015 4014 2 813450 254000 CPICVPCGLR YRLEALKFCEEFKEKCPICVPCGLRLAEKT EFKEKCPICVPCGLRLAEKTQVAIVRHFGL K C P L R L 0 1 0 0 3 0 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 10 0 1230.5672 Q9HAV4 Q9HAV4 44 53 XPO5 Exportin-5 yes yes 2 0.015183 89.142 By MS/MS 3 0 1 1 264790 264790 0 1984 2495 2049 4755 4016 4016 1 4844.9 0 CPILSLQDVVK VVTPALVCLSQLLTKCPILSLQDVVKGLFV LLTKCPILSLQDVVKGLFVCCLFLEYVALS K C P V K G 0 0 0 1 1 1 0 0 0 1 2 1 0 0 1 1 0 0 0 2 0 0 11 0 1270.6955 P78316 P78316 580 590 NOP14 Nucleolar protein 14 yes yes 2 0.013426 89.08 By MS/MS 4 0 1 1 225230 225230 0 1985 1217 2050 4756 4017 4017 1 21195 0 CPLSGACYSPEFK AASYRPIYRGKPVEKCPLSGACYSPEFKGQ EKCPLSGACYSPEFKGQICRVTTVTEIGKD K C P F K G 1 0 0 0 2 0 1 1 0 0 1 1 0 1 2 2 0 0 1 0 0 0 13 0 1514.6534 P53621 P53621 1185 1197 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00018784 166.69 By MS/MS 4 2 1 1 1 1 1 1 1 7 4300700 4300700 0 1986 1034 2051 4757;4758;4759;4760;4761;4762;4763 4018;4019;4020 4020 3 298420 0 CPPGVVPACHNSK AMAAVGLSWEECKQRCPPGVVPACHNSKDT QRCPPGVVPACHNSKDTVTISGPQAPVFEF R C P S K D 1 0 1 0 2 0 0 1 1 0 0 1 0 0 3 1 0 0 0 2 0 0 13 0 1421.6544 P49327 P49327 634 646 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 7.3529E-05 176.38 By MS/MS 2.4 1.02 1 2 1 1 5 4682800 4682800 0 1987 946 2052 4764;4765;4766;4767;4768 4021;4022 4022 2 1147100 0 CPSILGGLAPEKDQPK GEPFIQACMTFLKRRCPSILGGLAPEKDQP PSILGGLAPEKDQPKSAQLPPETLATMLAC R C P P K S 1 0 0 1 1 1 1 2 0 1 2 2 0 0 3 1 0 0 0 0 0 0 16 1 1708.8818 A5YKK6 A5YKK6 624 639 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.00026758 132.51 By MS/MS 2.5 0.5 1 1 2 597480 597480 0 1988 19 2053 4769;4770 4023 4023 1 182160 0 CPTDELSLTNCAVVNEK ______________________________ TDELSLTNCAVVNEKDFQSGQHVIVRTSPN R C P E K D 1 0 2 1 2 0 2 0 0 0 2 1 0 0 1 1 2 0 0 2 0 0 17 0 1948.887 P46459 P46459 11 27 NSF Vesicle-fusing ATPase yes yes 2 5.9458E-17 262.37 By MS/MS 5 0 1 1 999640 999640 0 1989 912 2054 4771 4024 4024 1 10026 0 CPVEIPPIR EISSPCCPRQVPPQRCPVEIPPIRRRSQSC QVPPQRCPVEIPPIRRRSQSCGPQPSWGAS R C P I R R 0 1 0 0 1 0 1 0 0 2 0 0 0 0 3 0 0 0 0 1 0 0 9 0 1079.5798 Q5T749 Q5T749 343 351 KPRP Keratinocyte proline-rich protein yes yes 2 0.010051 114.5 By MS/MS By MS/MS 4.12 2.42 1 2 1 1 1 1 1 1 7 2005500 321700 1683800 1990 1636 2055 4772;4773;4774;4775;4776;4777;4778;4779 4025;4026 4025 2 108810 1640000 CPVVLAPLLYPEK DAFLKTLRRDFPQERCPVVLAPLLYPEKRD ERCPVVLAPLLYPEKRDILMDRILPDSGGV R C P E K R 1 0 0 0 1 0 1 0 0 0 3 1 0 0 3 0 0 0 1 2 0 0 13 0 1497.8265 A5YKK6 A5YKK6 219 231 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.008933 114.4 By MS/MS 2 0 1 1 83758 83758 0 1991 19 2056 4780 4027;4028 4028 2 28330 0 CPYKDTLGPMQK IVSCRICKGDHWTTRCPYKDTLGPMQKELA TTRCPYKDTLGPMQKELAEQLGLSTGEKEK R C P Q K E 0 0 0 1 1 1 0 1 0 0 1 2 1 0 2 0 1 0 1 0 0 0 12 1 1436.6792 O75821 O75821 169 180 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 0.00028613 164.97 By MS/MS 7.86 0.833 3 2 2 7 6757900 6757900 0 1992 348 2057;2058 4781;4782;4783;4784;4785;4786;4787 4029;4030;4031 4031 143 3 106000 0 CQASTTVNPAPGAK YGLDPYSVAAILQQRCQASTTVNPAPGAKD RCQASTTVNPAPGAKDSLQVQIQGNQVHHL R C Q A K D 3 0 1 0 1 1 0 1 0 0 0 1 0 0 2 1 2 0 0 1 0 0 14 0 1400.6718 P41214 P41214 528 541 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.0027074 125.97 By MS/MS 5 0 1 1 899650 899650 0 1993 867 2059 4788 4032 4032 1 9023 0 CQDVIVAAR LKYARNINSHFANKKCQDVIVAARNLMTSE HFANKKCQDVIVAARNLMTSEIHNTVKIIP K C Q A R N 2 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 1030.523 O43264 O43264 404 412 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 7.9161E-05 166.09 By MS/MS 4.5 0.5 1 1 2 3826900 3826900 0 1994 200 2060 4789;4790 4033;4034 4033 2 336610 0 CQHLQAEK ICHDLEARVEEEEERCQHLQAEKKKMQQNI VEEEEERCQHLQAEKKKMQQNIQELEEQLE R C Q E K K 1 0 0 0 1 2 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 1012.476 P35579 P35579 931 938 MYH9 Myosin-9 yes yes 2 0.0072877 115.49 By MS/MS 2 0 1 1 228180 228180 0 1995 824 2061 4791 4035 4035 1 77181 0 CQNALQQVVAR MPVIMIIMRDHTYAKCQNALQQVVARQGRP TYAKCQNALQQVVARQGRPVVICDKEDTET K C Q A R Q 2 1 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1285.6561 Q06210 Q06210 620 630 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 3.5156E-13 235.15 By MS/MS 5 0 1 1 2159700 2159700 0 1996 1295 2062 4792 4036 4036 1 21661 0 CQQGGIDTR NLTRFWPIIQIRIKRCQQGGIDTRIRGLEI QIRIKRCQQGGIDTRIRGLEILGPKPTFWP R C Q T R I 0 1 0 1 1 2 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 0 1033.4611 Q14999;Q8IWT3 Q14999 952 960 CUL7;CUL9 Cullin-7;Cullin-9 yes no 2 0.014159 93.143 By MS/MS 2 0 1 1 122350 122350 0 1997 1464 2063 4793 4037 4037 1 41383 0 CQQLQQEYSR NVNYEIPSLKKQIAKCQQLQQEYSRKEEEC KQIAKCQQLQQEYSRKEEECQAGAAEMREQ K C Q S R K 0 1 0 0 1 4 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1338.5986 Q96JB5 Q96JB5 136 145 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 1.0112E-14 234.2 By MS/MS 5.5 0.5 1 1 2 2546900 2546900 0 1998 2177 2064 4794;4795 4038 4038 1 24487 0 CQVASAASYDQPK GAILDKGRAMFLVAKCQVASAASYDQPKKA AKCQVASAASYDQPKKAEALEAAIENLNEA K C Q P K K 3 0 0 1 1 2 0 0 0 0 0 1 0 0 1 2 0 0 1 1 0 0 13 0 1423.6402 Q9UJX4 Q9UJX4 670 682 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2 1.3837E-17 267.07 By MS/MS 5 0 1 1 643470 643470 0 1999 2753 2065 4796 4039 4039 1 6453.7 0 CQVFEETQIGGER IQTSVNALSADVLGRCQVFEETQIGGERYN GRCQVFEETQIGGERYNFFTGCPKAKTCTF R C Q E R Y 0 1 0 0 1 2 3 2 0 1 0 0 0 1 0 0 1 0 0 1 0 0 13 0 1551.6988 Q99832 Q99832 345 357 CCT7 T-complex protein 1 subunit eta yes yes 2 1.3751E-43 317.44 By MS/MS By MS/MS 4.75 2.33 1 1 1 1 2 1 1 7 1 63093000 63000000 92935 2000 2270 2066 4797;4798;4799;4800;4801;4802;4803;4804 4040;4041;4042;4043;4044 4043 5 586140 95232 CREETFKQESQPPEK PTKLSSKNVSGQTDKCREETFKQESQPPEK CREETFKQESQPPEKNSGHSTSKGDRVAQS K C R E K N 0 1 0 0 1 2 4 0 0 0 0 2 0 1 2 1 1 0 0 0 0 0 15 2 1891.8734 Q5SW79 Q5SW79 776 790 CEP170 Centrosomal protein of 170 kDa yes yes 3 0.014321 85.976 By MS/MS 2 0 1 1 252340 252340 0 2001 1623 2067 4805 4045 4045 1 85352 0 CSACNVWR DEVEFSVILNQRTGKCSACNVWRVCEGPKA LNQRTGKCSACNVWRVCEGPKAVAAPRPDR K C S W R V 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 8 0 1051.4328 O75534 O75534 730 737 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.034727 114.78 By MS/MS 4 0 1 1 597830 597830 0 2002 333 2068 4806 4046 4046 0 56259 0 CSDFTEEICR KDGKSLTKDLGGNAKCSDFTEEICRRVKDL GGNAKCSDFTEEICRRVKDLD_________ K C S C R R 0 1 0 1 2 0 2 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 10 0 1315.5173 P50213 P50213 351 360 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 1.3379E-07 188.66 By MS/MS 7 0 1 1 1269900 1269900 0 2003 971 2069 4807 4047 4047 1 19935 0 CSDFTEEICRR KDGKSLTKDLGGNAKCSDFTEEICRRVKDL GNAKCSDFTEEICRRVKDLD__________ K C S R R V 0 2 0 1 2 0 2 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 11 1 1471.6184 P50213 P50213 351 361 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 3 0.047416 65.157 By MS/MS 7 0 1 1 2387000 2387000 0 2004 971 2070 4808 4048 4048 1 37471 0 CSDFVVVQFK SGPKREEIMESILFKCSDFVVVQFKDMDSS SILFKCSDFVVVQFKDMDSSYAKRDAFTDS K C S F K D 0 0 0 1 1 1 0 0 0 0 0 1 0 2 0 1 0 0 0 3 0 0 10 0 1227.5958 Q99700 Q99700 332 341 ATXN2 Ataxin-2 yes yes 2 1.9289E-07 199.68 By MS/MS 3 0 1 1 178850 178850 0 2005 2258 2071 4809 4049 4049 1 3272.5 0 CSDIVFAR FYNELTEILVRFQNKCSDIVFARKTERDEL LVRFQNKCSDIVFARKTERDELLKDLQQSI K C S A R K 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 8 0 966.4593 Q8WUM4 Q8WUM4 691 698 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.010796 109.86 By MS/MS 4 0 1 1 948750 948750 0 2006 2018 2072 4810 4050 4050 1 89283 0 CSDSDGLAPPQHLIR QHMTEVVRRCPHHERCSDSDGLAPPQHLIR CSDSDGLAPPQHLIRVEGNLRVEYLDDRNT R C S I R V 1 1 0 2 1 1 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 15 0 1664.7941 P04637 P04637 182 196 TP53 Cellular tumor antigen p53 yes yes 3 0.0011276 117.27 By MS/MS 6 0 1 1 2656400 2656400 0 2007 476 2073 4811 4051 4051 1 18260 0 CSEGVFLLTTTPR VEFASKPAARKAFERCSEGVFLLTTTPRPV ERCSEGVFLLTTTPRPVIVEPLEQLDDEDG R C S P R P 0 1 0 0 1 0 1 1 0 0 2 0 0 1 1 1 3 0 0 1 0 0 13 0 1479.7392 P23246 P23246 431 443 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 2.6961E-05 184.24 By MS/MS 4 0 1 1 466500 466500 0 2008 700 2074 4812 4052 4052 1 43901 0 CSEISAELIR LSGVQQPSEGVGGGRCSEISAELIRSLTEL VGGGRCSEISAELIRSLTELQELEAVYERL R C S I R S 1 1 0 0 1 0 2 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 10 0 1176.5809 Q9H9E3 Q9H9E3 25 34 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.0011545 131.62 By MS/MS 4 0 1 1 1348600 1348600 0 2009 2486 2075 4813 4053 4053 1 126910 0 CSGPGLSPGMVR FKVPVHDVTDASKVKCSGPGLSPGMVRANL KVKCSGPGLSPGMVRANLPQSFQVDTSKAG K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 P21333 P21333 1453 1464 FLNA Filamin-A yes yes 2 0.00047994 134.84 By MS/MS 2 0 1 1 760690 760690 0 2010 677 2076 4814 4054 4054 1 257300 0 CSHLLVK SSGGKNGQGEPARVRCSHLLVKHSQSRRPS QGEPARVRCSHLLVKHSQSRRPSSWRQEKI R C S V K H 0 0 0 0 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 7 0 855.46366 Q13526 Q13526 57 63 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 2 0.026402 107.43 By MS/MS 9.5 0.5 1 1 2 901070 901070 0 2011 1394 2077 4815;4816 4055 4055 1 44155 0 CSILAAANPAYGR ISIAKAGILTTLNARCSILAAANPAYGRYN ARCSILAAANPAYGRYNPRRSLEQNIQLPA R C S G R Y 4 1 1 0 1 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 13 0 1362.6714 P33993 P33993 482 494 MCM7 DNA replication licensing factor MCM7 yes yes 2 1.1959E-07 210.64 By MS/MS 4.5 0.5 1 1 2 3516100 3516100 0 2012 808 2078 4817;4818 4056;4057 4057 2 132370 0 CSKEVATAIR VAIGDYNGHVGLGVKCSKEVATAIRGAIIL GLGVKCSKEVATAIRGAIILAKLSIVPVRR K C S I R G 2 1 0 0 1 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 10 1 1133.5863 P15880 P15880 143 152 RPS2 40S ribosomal protein S2 yes yes 2 8.3129E-05 169.99 By MS/MS 8 0 1 1 3298200 3298200 0 2013 627 2079 4819 4058 4058 1 41639 0 CSLLDPFAAVR AALAPHLDDALRALRCSLLDPFAAVRRESC RALRCSLLDPFAAVRRESCSCAAALAQATP R C S V R R 2 1 0 1 1 0 0 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 11 0 1247.6332 Q86Y56 Q86Y56 173 183 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.0012543 116.52 By MS/MS 4.5 0.5 1 1 2 641710 641710 0 2014 1850 2080 4820;4821 4059;4060 4059 2 50417 0 CSLPAEEDSVLEK TFMISPETVTGTGKKCSLPAEEDSVLEKLG KKCSLPAEEDSVLEKLGERKPCNSQPSELS K C S E K L 1 0 0 1 1 0 3 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 13 0 1475.6814 P27816 P27816 635 647 MAP4 Microtubule-associated protein 4 yes yes 2 0.00040257 141.71 By MS/MS 2.5 0.5 1 1 2 814880 814880 0 2015 746 2081 4822;4823 4061;4062 4061 2 208970 0 CSQLTDVGFTTLAR LGQNCPRLRILEVARCSQLTDVGFTTLARN RCSQLTDVGFTTLARNCHELEKMDLEECVQ R C S A R N 1 1 0 1 1 1 0 1 0 0 2 0 0 1 0 1 3 0 0 1 0 0 14 0 1567.7664 Q96IG2 Q96IG2 283 296 FBXL20 F-box/LRR-repeat protein 20 yes yes 2 0.0037003 101.61 By MS/MS 7 0 1 1 734700 734700 0 2016 2173 2082 4824 4063 4063 0 11533 0 CSSILLHGK HLLVMKGAPERILDRCSSILLHGKEQPLDE ERILDRCSSILLHGKEQPLDEELKDAFQNA R C S G K E 0 0 0 0 1 0 0 1 1 1 2 1 0 0 0 2 0 0 0 0 0 0 9 0 1013.5328 P05023 P05023 518 526 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 0.0079231 104.06 By MS/MS 2.5 1.12 2 2 2 2 8 4800000 4800000 0 2017 481 2083 4825;4826;4827;4828;4829;4830;4831;4832 4064;4065;4066;4067 4064 2 780600 0 CSSNSNFLAEVK C S V K 1 0 2 0 1 0 1 0 0 0 1 1 0 1 0 3 0 0 0 1 0 0 12 0 1354.6187 REV__Q0VFX4 yes yes 2 0.00095146 126.07 By MS/MS By MS/MS 5 0.756 2 3 2 6 1 7874200 7797100 77038 + 2018 2964 2084 4833;4834;4835;4836;4837;4838;4839 4068;4069;4070;4071 4071 4 233740 64695 CSVLAAANPVYGR VTIAKAGIHARLNARCSVLAAANPVYGRYD ARCSVLAAANPVYGRYDQYKTPMENIGLQD R C S G R Y 3 1 1 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1376.6871 P25205 P25205 446 458 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.00027303 155.11 By MS/MS 4 0 1 1 1937700 1937700 0 2019 719 2085 4840 4072 4072 1 182350 0 CSVSSLGFNVH YRIKKNIDQCSEIVKCSVSSLGFNVH____ EIVKCSVSSLGFNVH_______________ K C S V H - 0 0 1 0 1 0 0 1 1 0 1 0 0 1 0 3 0 0 0 2 0 0 11 0 1205.5499 Q92878 Q92878 1302 1312 RAD50 DNA repair protein RAD50 yes yes 2 0.0022961 111.06 By MS/MS 3 0 1 1 154760 154760 0 2020 2074 2086 4841 4073 4073 1 2831.6 0 CTDDFNGAQCK KMNVSPDVNYEELARCTDDFNGAQCKAVCV ELARCTDDFNGAQCKAVCVEAGMIALRRGA R C T C K A 1 0 1 2 2 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1314.4969 P17980 P17980 387 397 PSMC3 26S protease regulatory subunit 6A yes yes 2 2.9038E-13 237.44 By MS/MS 6.5 0.5 1 1 2 2483600 2483600 0 2021 647 2087 4842;4843 4074 4074 1 18535 0 CTDQLLLLGQTDR NLQEVKRSTYDHTRKCTDQLLLLGQTDRAV RKCTDQLLLLGQTDRAVQLLLETSADNQHY K C T D R A 0 1 0 2 1 2 0 1 0 0 4 0 0 0 0 0 2 0 0 0 0 0 13 0 1531.7664 Q9BZH6 Q9BZH6 1000 1012 WDR11 WD repeat-containing protein 11 yes yes 2 0.0054285 102.33 By MS/MS 1.5 0.5 1 1 2 92030 92030 0 2022 2379 2088 4844;4845 4075 4075 1 25842 0 CTGGEVGATSALAPK PPKFDPNEIKVVYLRCTGGEVGATSALAPK CTGGEVGATSALAPKIGPLGLSPKKVGDDI R C T P K I 3 0 0 0 1 0 1 3 0 0 1 1 0 0 1 1 2 0 0 1 0 0 15 0 1417.6871 P30050 P30050 17 31 RPL12 60S ribosomal protein L12 yes yes 2 0.00046494 189.24 By MS/MS By matching 9.33 0.471 2 1 2 1 2359200 2305100 54091 2023 766 2089 4846;4847;4848 4076;4077 4077 2 65353 123340 CTHWAEGGK ISRLSREHGAFDAVKCTHWAEGGKGALALA AFDAVKCTHWAEGGKGALALAQAVQRAAQA K C T G K G 1 0 0 0 1 0 1 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 9 0 1044.4447 P11586 P11586 785 793 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.01534 91.069 By MS/MS 4 0 1 1 524500 524500 0 2024 582 2090 4849 4078 4078 1 49359 0 CTQDLGNSTK RDGKLKPLPGETMEKCTQDLGNSTKAVSSA ETMEKCTQDLGNSTKAVSSAIAQLLGEVAQ K C T T K A 0 0 1 1 1 1 0 1 0 0 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1122.4975 Q9Y490 Q9Y490 1087 1096 TLN1 Talin-1 yes yes 2 4.2832E-15 242.35 By MS/MS 2.5 0.5 1 1 2 797470 797470 0 2025 2888 2091 4850;4851 4079 4079 1 216060 0 CTSFLVDELGVVDR EPEYMEEVRRQHMERCTSFLVDELGVVDRS RCTSFLVDELGVVDRSQAGDRIFFVSAKEV R C T D R S 0 1 0 2 1 0 1 1 0 0 2 0 0 1 0 1 1 0 0 3 0 0 14 0 1608.7818 O95140 O95140 281 294 MFN2 Mitofusin-2 yes yes 2 1.9529E-11 241.92 By MS/MS 5 0 1 1 313940 313940 0 2026 386 2092 4852 4080 4080 1 3148.7 0 CTTLIEQQFTYGK DTLKMHIAKILTTVKCTTLIEQQFTYGKID VKCTTLIEQQFTYGKIDLGFGTKVADSELC K C T G K I 0 0 0 0 1 2 1 1 0 1 1 1 0 1 0 0 3 0 1 0 0 0 13 0 1587.7603 Q8TCG1 Q8TCG1 445 457 KIAA1524 Protein CIP2A yes yes 2 0.00022973 160.52 By MS/MS 4 0 1 1 0 0 0 2027 1990 2093 4853 4081 4081 1 0 0 CTVFHGAQVEDAFR LVQAGIRDGVVRPLKCTVFHGAQVEDAFRY KCTVFHGAQVEDAFRYMAQGKHIGKVVVQV K C T F R Y 2 1 0 1 1 1 1 1 1 0 0 0 0 2 0 0 1 0 0 2 0 0 14 0 1635.7464 P49327 P49327 1828 1841 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 9.0977E-06 208.08 By MS/MS 2.62 1.32 2 2 2 1 1 8 9406700 9406700 0 2028 946 2094 4854;4855;4856;4857;4858;4859;4860;4861 4082;4083;4084;4085 4084 4 2341900 0 CTVVAAVLGSGR LRQLNLAGVRMTPVKCTVVAAVLGSGRHAL PVKCTVVAAVLGSGRHALDEVNLASCQLDP K C T G R H 2 1 0 0 1 0 0 2 0 0 1 0 0 0 0 1 1 0 0 3 0 0 12 0 1188.6285 Q86UT6 Q86UT6 713 724 NLRX1 NLR family member X1 yes yes 2 2.2069E-06 196.48 By MS/MS 4 0 1 1 975860 975860 0 2029 1825 2095 4862 4086 4086 1 91835 0 CVANNQVETLEK GIRARSARLQWFCDRCVANNQVETLEKLVE CDRCVANNQVETLEKLVELTQKLFECDRDQ R C V E K L 1 0 2 0 1 1 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1403.6715 P42704 P42704 930 941 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.419E-34 266.17 By MS/MS By MS/MS 3 1.29 1 1 2 1 1 5 1 26854000 26854000 0 2030 886 2096 4863;4864;4865;4866;4867;4868 4087;4088;4089;4090;4091 4087 5 944860 0 CVAQASK KLALRYAGRQTEALKCVAQASKNRSLADFE GRQTEALKCVAQASKNRSLADFEKALTDYR K C V S K N 2 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 7 0 762.36942 O00231 O00231 289 295 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.037102 99.375 By MS/MS 7 0 1 1 371690 371690 0 2031 93 2097 4869 4092 4092 1 5834.8 0 CVCGKNPAK CIPFKPLCELQPGAKCVCGKNPAKYYTLFG LQPGAKCVCGKNPAKYYTLFGRSY______ K C V A K Y 1 0 1 0 2 0 0 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 9 1 1032.4845 P07814 P07814 1495 1503 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.029298 107.59 By MS/MS 3.5 0.5 1 1 2 263520 263520 0 2032 512 2098 4870;4871 4093 4093 1 9847.9 0 CVDDAAIVLGALAGPDPR IPLVNSMDVPGILTRCVDDAAIVLGALAGP DAAIVLGALAGPDPRDSTTVHEPINKPFML R C V P R D 4 1 0 3 1 0 0 2 0 1 2 0 0 0 2 0 0 0 0 2 0 0 18 0 1808.9091 Q9H0R6 Q9H0R6 236 253 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 0.00034995 156.2 By MS/MS 6 0 1 1 597400 597400 0 2033 2413 2099 4872 4094 4094 1 4106.6 0 CVDFQTLK KCPLDPYFIMPDKCKCVDFQTLKLQELPDA IMPDKCKCVDFQTLKLQELPDAVPHGEMPR K C V L K L 0 0 0 1 1 1 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 0 1009.4903 P33992 P33992 221 228 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.041604 85.676 By MS/MS 4 0 1 1 1135400 1135400 0 2034 807 2100 4873 4095 4095 1 106850 0 CVEENNGVAK FGTSSSSATLPLMMKCVEENNGVAKHISRF PLMMKCVEENNGVAKHISRFILPIGATVNM K C V A K H 1 0 2 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 10 0 1118.5026 Q15758 Q15758 363 372 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 1.6047E-05 170.5 By MS/MS 3.33 2.62 1 1 1 3 833760 833760 0 2035 1530 2101 4874;4875;4876 4096;4097;4098 4097 3 181400 0 CVELGAYGQAVR RKLQFLFELPSRLTKCVELGAYGQAVRYQG LTKCVELGAYGQAVRYQGRAQAVLQQYQHL K C V V R Y 2 1 0 0 1 1 1 2 0 0 1 0 0 0 0 0 0 0 1 2 0 0 12 0 1321.6449 Q9UID3 Q9UID3 190 201 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.00030113 143.89 By MS/MS 4.5 0.5 1 1 2 1471900 1471900 0 2036 2741 2102 4877;4878 4099 4099 1 110900 0 CVFELPAENDKPHDVEINK WKEAKPEDLMDSKLRCVFELPAENDKPHDV LPAENDKPHDVEINKIISTTASKTETPIVS R C V N K I 1 0 2 2 1 0 3 0 1 1 1 2 0 1 2 0 0 0 0 2 0 0 19 1 2253.0736 O95292 O95292 121 139 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 0.001005 104.2 By MS/MS 8 0 1 1 1958900 1958900 0 2037 401 2103 4879 4100 4100 1 24731 0 CVGLSAPQLGVPR QRLTQRLVQVMRRRRCVGLSAPQLGVPRQV RRCVGLSAPQLGVPRQVLALELPEALCREC R C V P R Q 1 1 0 0 1 1 0 2 0 0 2 0 0 0 2 1 0 0 0 2 0 0 13 0 1352.7235 Q9HBH1 Q9HBH1 108 120 PDF Peptide deformylase, mitochondrial yes yes 2 0.00018592 164.33 By MS/MS 9 0 1 1 627880 627880 0 2038 2504 2104 4880 4101 4101 1 12357 0 CVICGGPGVSDAYYCK VRICDECNYGSYQGRCVICGGPGVSDAYYC VICGGPGVSDAYYCKECTIQEKDRDGCPKI R C V C K E 1 0 0 1 3 0 0 3 0 1 0 1 0 0 1 1 0 0 2 2 0 0 16 0 1804.7583 Q7RTV0 Q7RTV0 58 73 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 1.8697E-07 220.5 By MS/MS 10 0 1 1 367060 367060 0 2039 1776 2105 4881 4102;4103 4103 2 19783 0 CVLNEGMPIYR ITSHPGQIVKHGDIKCVLNEGMPIYRRPYE GDIKCVLNEGMPIYRRPYEKGRLIIEFKVN K C V Y R R 0 1 1 0 1 0 1 1 0 1 1 0 1 0 1 0 0 0 1 1 0 0 11 0 1350.6424 P31689 P31689 302 312 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.00019341 143.7 By MS/MS 7 0 1 1 1140500 1140500 0 2040 787 2106 4882 4104 4104 1 17904 0 CVLPEEDSGELAKPK RLWQTVVGKTYGLWKCVLPEEDSGELAKPK CVLPEEDSGELAKPKIGFPETTEEELEEIA K C V P K I 1 0 0 1 1 0 3 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 15 1 1670.8185 Q9Y3F4 Q9Y3F4 305 319 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 0.00090274 166.69 By MS/MS 7 0 2 2 12410000 12410000 0 2041 2877 2107 4883;4884 4105;4106 4105 2 194820 0 CVNLVQK LQSGFLPYCEPVYQRCVNLVQKTLAQAMLN YCEPVYQRCVNLVQKTLAQAMLNNAQPDQY R C V Q K T 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 859.45857 Q92973 Q92973 620 626 TNPO1 Transportin-1 yes yes 2 0.016696 118.01 By MS/MS 4 0 1 1 1467300 1467300 0 2042 2082 2108 4885 4107 4107 1 138080 0 CVSCLPGQR RLAQVAKAVTQALNRCVSCLPGQRDVDNAL TQALNRCVSCLPGQRDVDNALRAVGDASKR R C V Q R D 0 1 0 0 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 9 0 1075.4903 Q9Y490 Q9Y490 1199 1207 TLN1 Talin-1 yes yes 2 0.0019318 122.18 By MS/MS 2 0 1 1 746680 746680 0 2043 2888 2109 4886 4108 4108 1 252560 0 CVSELVIESR LRDEKDSQGENMFLRCVSELVIESREFDMI NMFLRCVSELVIESREFDMILGKLENDGSR R C V S R E 0 1 0 0 1 0 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1190.5965 Q8N1F7 Q8N1F7 569 578 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.00033505 137.95 By MS/MS 4 0 1 1 1727200 1727200 0 2044 1903 2110 4887 4109 4109 1 162540 0 CVYISSDGGR YINEFVSISTNLTDRCVYISSDGGRLCRPY NLTDRCVYISSDGGRLCRPYIIVKKQKPAV R C V G R L 0 1 0 1 1 0 0 2 0 1 0 0 0 0 0 2 0 0 1 1 0 0 10 0 1112.4921 Q9NW08 Q9NW08 582 591 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.012162 90.601 By MS/MS 3 0 1 1 248470 248470 0 2045 2607 2111 4888 4110 4110 1 4546.3 0 CYDLIPTSSK ESNNSVYTSFMKSHRCYDLIPTSSKLVVFD MKSHRCYDLIPTSSKLVVFDTSLQVKKAFF R C Y S K L 0 0 0 1 1 0 0 0 0 1 1 1 0 0 1 2 1 0 1 0 0 0 10 0 1182.5591 P54619 P54619 38 47 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 0.052033 71.349 By MS/MS 7.5 0.5 1 1 2 874230 874230 0 2046 1044 2112 4889;4890 4111 4111 1 12754 0 CYEMASHLR LMGKEGVHGGLINKKCYEMASHLRRSQY__ GLINKKCYEMASHLRRSQY___________ K C Y L R R 1 1 0 0 1 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 9 0 1165.5008 P07737;CON__P02584 P07737 128 136 PFN1 Profilin-1 yes no 2 0.0016847 125.31 By MS/MS 10 0 1 1 228350 228350 0 2047 510 2113 4891 4112 4112 1 12307 0 CYHNLDAFVR QQHNPAANPTMIRAKCYHNLDAFVRLIALL MIRAKCYHNLDAFVRLIALLVKHSGEATNT K C Y V R L 1 1 1 1 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1293.5924 A5YKK6 A5YKK6 1932 1941 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.0069305 109.83 By MS/MS 2 0 1 1 285240 285240 0 2048 19 2114 4892 4113 4113 1 96480 0 CYIASAGADALAK KFEESIHDVAFHPSKCYIASAGADALAKVF SKCYIASAGADALAKVFV____________ K C Y A K V 5 0 0 1 1 0 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1309.6336 O43815 O43815 765 777 STRN Striatin yes yes 2 0.002423 111.27 By MS/MS 4 0 1 1 1638800 1638800 0 2049 237 2115 4893 4114 4114 1 154220 0 CYLGATCAYDAAK GTVLERDGHYAVAAKCYLGATCAYDAAKVL AKCYLGATCAYDAAKVLAKKGDAASLRTAA K C Y A K V 4 0 0 1 2 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 0 0 13 0 1462.6221 Q8TEQ6 Q8TEQ6 1045 1057 GEMIN5 Gem-associated protein 5 yes yes 2 2.2894E-11 228.84 By MS/MS 3.5 0.5 1 1 2 1305100 1305100 0 2050 2002 2116 4894;4895 4115 4115 1 43243 0 CYLTMTQALEAR LGVQDKLVQTPLTDRCYLTMTQALEARLGG TDRCYLTMTQALEARLGGSPFGPAGTGKTE R C Y A R L 2 1 0 0 1 1 1 0 0 0 2 0 1 0 0 0 2 0 1 0 0 0 12 0 1455.685 Q14204 Q14204 1888 1899 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.2216E-06 196.44 By MS/MS 1.5 0.5 2 2 4 901570 901570 0 2051 1433 2117;2118 4896;4897;4898;4899 4116;4117;4118;4119 4119 827 4 260230 0 CYSCGEFGHIQK PGHLARDCDHADEQKCYSCGEFGHIQKDCT EQKCYSCGEFGHIQKDCTKVKCYRCGETGH K C Y Q K D 0 0 0 0 2 1 1 2 1 1 0 1 0 1 0 1 0 0 1 0 0 0 12 0 1484.6177 P62633 P62633 119 130 CNBP Cellular nucleic acid-binding protein yes yes 2;3 5.1039E-05 167.12 By MS/MS 9.5 0.5 2 2 4 2464000 2464000 0 2052 1163 2119 4900;4901;4902;4903 4120;4121;4122 4121 3 65598 0 CYSCGEFGHIQKDCTK PGHLARDCDHADEQKCYSCGEFGHIQKDCT YSCGEFGHIQKDCTKVKCYRCGETGHVAIN K C Y T K V 0 0 0 1 3 1 1 2 1 1 0 2 0 1 0 1 1 0 1 0 0 0 16 1 1988.8179 P62633 P62633 119 134 CNBP Cellular nucleic acid-binding protein yes yes 4 0.033377 57.267 By MS/MS 9 0 1 1 314990 314990 0 2053 1163 2120 4904 4123 4123 1 6199 0 DAAAPAEPQAQHTR PRAPGPQAGPGPGVRDAAAPAEPQAQHTRS RDAAAPAEPQAQHTRSRERADGTGPTKGDM R D A T R S 5 1 0 1 0 2 1 0 1 0 0 0 0 0 2 0 1 0 0 0 0 0 14 0 1461.6961 O76024 O76024 56 69 WFS1 Wolframin yes yes 2 0.010413 90.434 By MS/MS 1 0 1 1 107030 107030 0 2054 359 2121 4905 4124 4124 1 25791 0 DAAFATLVSDR NNRLGSALSWSIRAKDAAFATLVSDRFLRD IRAKDAAFATLVSDRFLRDYCERGCFSDLD K D A D R F 3 1 0 2 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 11 0 1164.5775 Q9BW27 Q9BW27 495 505 NUP85 Nuclear pore complex protein Nup85 yes yes 2 0.00085966 137.98 By MS/MS 5 0 1 1 720650 720650 0 2055 2342 2122 4906 4125 4125 1 7227.8 0 DAAFEALGTALK AALLKHINDSAPEVRDAAFEALGTALKVVG EVRDAAFEALGTALKVVGEKAVNPFLADVD R D A L K V 4 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1205.6292 Q14008 Q14008 457 468 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 4.2618E-05 169.76 By MS/MS 3 1.41 1 1 1 1 1 5 4511800 4511800 0 2056 1417 2123 4907;4908;4909;4910;4911 4126;4127;4128;4129;4130 4129 4 1164500 0 DAAFQNVLTHVCLD QQDLHRAIEKMKKSKDAAFQNVLTHVCLD_ KDAAFQNVLTHVCLD_______________ K D A L D - 2 0 1 2 1 1 0 0 1 0 2 0 0 1 0 0 1 0 0 2 0 0 14 0 1601.7508 Q8NBU5 Q8NBU5 348 361 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 0.0004824 155.47 By MS/MS 7 0 1 1 276240 276240 0 2057 1945 2124 4912 4131 4131 1 4336.5 0 DAAGIAMEAIAFAR GGRTMVQLFEKGYGKDAAGIAMEAIAFARN KDAAGIAMEAIAFARNQGFDVVLVDTAGRM K D A A R N 6 1 0 1 0 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 14 0 1405.7024 P08240 P08240 497 510 SRPR Signal recognition particle receptor subunit alpha yes yes 2 5.8804E-05 184.36 By MS/MS 5 0 2 2 559030 559030 0 2058 522 2125;2126 4913;4914 4132;4133;4134 4132 223 3 5606.8 0 DAAGSGDKPGADTGR ALEMLTAFASHIRARDAAGSGDKPGADTGR DAAGSGDKPGADTGR_______________ R D A G R - 3 1 0 3 0 0 0 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 15 1 1373.6171 Q96EL3 Q96EL3 98 112 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2;3 7.623E-07 211.22 By MS/MS 10 0 2 2 3629400 3629400 0 2059 2146 2127 4915;4916 4135;4136 4136 2 195610 0 DAAHITPDNFELCVK KSLLKCVESLSFIVRDAAHITPDNFELCVK DAAHITPDNFELCVKTLRIFVEASLNGGCK R D A V K T 2 0 1 2 1 0 1 0 1 1 1 1 0 1 1 0 1 0 0 1 0 0 15 0 1728.8141 Q92538 Q92538 1402 1416 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2;3 0.0014511 149.82 By MS/MS 2 0 2 2 378210 378210 0 2060 2050 2128 4917;4918 4137;4138 4138 2 127920 0 DAAINSLVEIYR PHICNLLGDPNSQVRDAAINSLVEIYRHVG QVRDAAINSLVEIYRHVGERVRADLSKKGL R D A Y R H 2 1 1 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1362.7143 Q7Z460 Q7Z460 185 196 CLASP1 CLIP-associating protein 1 yes yes 2 0.0040292 106.4 By MS/MS 3 0 1 1 39232 39232 0 2061 1790 2129 4919 4139 4139 1 717.84 0 DAAIYLVTSLASK LQEYAKNPSVNWKHKDAAIYLVTSLASKAQ HKDAAIYLVTSLASKAQTQKHGITQANELV K D A S K A 3 0 0 1 0 0 0 0 0 1 2 1 0 0 0 2 1 0 1 1 0 0 13 0 1350.7395 P55060 P55060 428 440 CSE1L Exportin-2 yes yes 2 2.7003E-05 202.16 By MS/MS 4 0 1 1 223890 223890 0 2062 1053 2130 4920 4140 4140 1 21070 0 DAALATALGDKK AQIKLREYEAALNSKDAALATALGDKKSLE NSKDAALATALGDKKSLEGDLEDLKDQIAQ K D A K K S 4 0 0 2 0 0 0 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 12 1 1172.6401 P20700 P20700 146 157 LMNB1 Lamin-B1 yes yes 2 0.025836 96.113 By MS/MS 5 0 1 1 1925300 1925300 0 2063 674 2131 4921 4141 4141 1 19310 0 DAALAVAEAMADKAELEK PKLKELNLSFCEIKRDAALAVAEAMADKAE LAVAEAMADKAELEKLDLNGNTLGEEGCEQ R D A E K L 7 0 0 2 0 0 3 0 0 0 2 2 1 0 0 0 0 0 0 1 0 0 18 1 1844.919 P46060 P46060 308 325 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0016563 127.03 By MS/MS 5 0 1 1 0 0 0 2064 908 2132 4922 4142 4142 1 0 0 DAALLCVR ETDGFSGSDLKEMCRDAALLCVREYVNSTS DLKEMCRDAALLCVREYVNSTSEESHDEDE R D A V R E 2 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 916.48004 Q8NBU5 Q8NBU5 305 312 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 0.0073118 114.78 By MS/MS 7 0 1 1 1385200 1385200 0 2065 1945 2133 4923 4143 4143 1 21745 0 DAALLEAAR AALVVHCYSKSPSNKDAALLEAARANNMQE KSPSNKDAALLEAARANNMQEVSRLLSEGA K D A A R A 4 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 928.49779 Q9H078 Q9H078 135 143 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.0020909 120.15 By MS/MS 6 0 1 1 1516400 1516400 0 2066 2402 2134 4924 4144 4144 1 10424 0 DAANILVMGVENSAK DLASHGYVEVTSLPRDAANILVMGVENSAK DAANILVMGVENSAKEGDPGTIFFFREGAA R D A A K E 3 0 2 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 0 2 0 0 15 0 1530.7712 Q9NWS8 Q9NWS8 205 219 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 0.00047382 162.48 By MS/MS 7.5 0.5 1 1 2 337470 337470 0 2067 2611 2135 4925;4926 4145;4146 4145 2 4687.3 0 DAANLLNDALAIR LNILALVYRDQNKYKDAANLLNDALAIREK YKDAANLLNDALAIREKTLGKDHPAVAATL K D A I R E 4 1 2 2 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 13 0 1368.7361 Q07866 Q07866 273 285 KLC1 Kinesin light chain 1 yes yes 2 1.429E-05 193.28 By MS/MS 5.5 0.5 1 1 2 830810 830810 0 2068 1303 2136 4927;4928 4147;4148 4148 2 7186.3 0 DAAQVVVAGR HCHLDAPANAISVCRDAAQVVVAGRSIFKI ISVCRDAAQVVVAGRSIFKIYAIEEEQFVE R D A G R S 3 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 10 0 984.53524 Q96S15 Q96S15 37 46 WDR24 WD repeat-containing protein 24 yes yes 2 0.0079473 106.18 By MS/MS 4 0 1 1 0 0 0 2069 2229 2137 4929 4149 4149 1 0 0 DAATDVASR SICLSILDRSLNFRRDAATDVASRNDPKYV SLNFRRDAATDVASRNDPKYVGRVLSAMIN R D A S R N 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 9 0 904.42502 Q08188 Q08188 202 210 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 2 0.001792 135.71 By matching By MS/MS 2.8 1.17 1 1 1 2 1 4 3673700 2952500 721280 2070 1306 2138 4930;4931;4932;4933;4934 4150;4151;4152 4152 3 277850 390830 DAATDVASRNDPK SICLSILDRSLNFRRDAATDVASRNDPKYV RRDAATDVASRNDPKYVGRVLSAMINSNDD R D A P K Y 3 1 1 3 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 13 1 1358.6426 Q08188 Q08188 202 214 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 2;3 0.005584 139.31 By matching By MS/MS 3 1.05 1 2 2 4 2 7 2596900 505160 2091800 2071 1306 2139 4935;4936;4937;4938;4939;4940;4941;4942;4943 4153;4154 4153 2 47539 1105900 DAATDVASRNDPKYVGR SICLSILDRSLNFRRDAATDVASRNDPKYV ATDVASRNDPKYVGRVLSAMINSNDDNGVL R D A G R V 3 2 1 3 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 2 0 0 17 2 1833.8969 Q08188 Q08188 202 218 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 3 0.0021645 118.51 By MS/MS 2 0.816 1 1 1 3 682850 0 682850 2072 1306 2140 4944;4945;4946 4155;4156 4156 2 0 330730 DAATGFLLDGK EHRAATAQYLSPRARDAATGFLLDGKVLSL PRARDAATGFLLDGKVLSLTDFQTHTSLGL R D A G K V 2 0 0 2 0 0 0 2 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1106.5608 Q8N1F8 Q8N1F8 311 321 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.00055732 130.41 By MS/MS 3.5 0.5 1 1 2 1156500 1156500 0 2073 1904 2141 4947;4948 4157 4157 1 44962 0 DACLNAR FTGREFDELNPSAQRDACLNARCFARVEPS ELNPSAQRDACLNARCFARVEPSHKSKIVE R D A A R C 2 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 818.37049 P16615 P16615 667 673 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.017961 114.72 By MS/MS 2.5 1.12 1 1 1 1 4 6283600 6283600 0 2074 635 2142 4949;4950;4951;4952 4158;4159;4160 4158 3 1129900 0 DACLVANILDPR SQGTKRPGGPSNVLRDACLVANILDPRIKQ VLRDACLVANILDPRIKQEIIKKFIKQHLS R D A P R I 2 1 1 2 1 0 0 0 0 1 2 0 0 0 1 0 0 0 0 1 0 0 12 0 1355.6867 Q5VIR6 Q5VIR6 240 251 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0091421 91.469 By MS/MS 4.5 0.5 1 1 2 494630 494630 0 2075 1644 2143 4953;4954 4161 4161 1 42172 0 DADSITLFDVQQK CDEIFYAGTGNLLLRDADSITLFDVQQKRT LRDADSITLFDVQQKRTLASVKISKVKYVI R D A Q K R 1 0 0 3 0 2 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 13 0 1478.7253 P53621 P53621 468 480 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 2.016E-17 265.36 By MS/MS 3 1.29 1 1 2 1 1 6 4172600 4172600 0 2076 1034 2144 4955;4956;4957;4958;4959;4960 4162;4163;4164;4165 4164 4 420920 0 DADSITLFDVQQKR CDEIFYAGTGNLLLRDADSITLFDVQQKRT RDADSITLFDVQQKRTLASVKISKVKYVIW R D A K R T 1 1 0 3 0 2 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 1 1634.8264 P53621 P53621 468 481 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 5.4024E-33 312.78 By MS/MS 3 1.41 2 2 2 2 2 10 5353800 5353800 0 2077 1034 2145 4961;4962;4963;4964;4965;4966;4967;4968;4969;4970 4166;4167;4168;4169;4170;4171 4169 6 537400 0 DADSQNPDAPEGK SNLENSTYDLYTIPKDADSQNPDAPEGKRS PKDADSQNPDAPEGKRSSGLTAVWVARNRF K D A G K R 2 0 1 3 0 1 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 13 0 1342.5637 P53621 P53621 399 411 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00011753 171.67 By MS/MS 2 0 1 1 224890 224890 0 2078 1034 2146 4971 4172 4172 1 76065 0 DADSQNPDAPEGKR SNLENSTYDLYTIPKDADSQNPDAPEGKRS KDADSQNPDAPEGKRSSGLTAVWVARNRFA K D A K R S 2 1 1 3 0 1 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 14 1 1498.6648 P53621 P53621 399 412 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.0015812 151.79 By MS/MS 2.5 0.5 2 2 4 524480 524480 0 2079 1034 2147 4972;4973;4974;4975 4173;4174 4174 2 129570 0 DADVQNFVSFISK AMMRKATASRLVTQRDADVQNFVSFISKDS QRDADVQNFVSFISKDSIQKSLQMYLERLK R D A S K D 1 0 1 2 0 1 0 0 0 1 0 1 0 2 0 2 0 0 0 2 0 0 13 0 1468.7198 P42126 P42126 271 283 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 2 1.2344E-07 210.15 By MS/MS 8 0 1 1 288240 288240 0 2080 874 2148 4976 4175 4175 1 3639 0 DAEAVQK LAKERAGLSKLPDLKDAEAVQKFFLEEIQL LSKLPDLKDAEAVQKFFLEEIQLGEELLAQ K D A Q K F 2 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 7 0 759.37628 Q15388 Q15388 62 68 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.0091833 138.48 By MS/MS 8.5 1.12 1 1 1 1 4 2432900 2432900 0 2081 1506 2149 4977;4978;4979;4980 4176 4176 1 56521 0 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1108.4825 CON__P13645;P13645;CON__Q7Z3Y7;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y8;Q7Z3Y8;CON__Q7Z3Z0;Q7Z3Z0 CON__P13645 335 343 KRT10;KRT28;KRT27;KRT25 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 25 no no 2 5.6857E-07 201.07 By MS/MS By MS/MS 5.38 2.85 2 2 3 2 2 2 2 2 2 2 10 11 195980000 86319000 109660000 + 2082 50;71 2150 4981;4982;4983;4984;4985;4986;4987;4988;4989;4990;4991;4992;4993;4994;4995;4996;4997;4998;4999;5000;5001 4177;4178;4179;4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201;4202;4203 4197 27 5888600 30142000 DAEAWFNEKSK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT QNRKDAEAWFNEKSKELTTEIDNNIEQISS K D A S K E 2 0 1 1 0 0 2 0 0 0 0 2 0 1 0 1 0 1 0 0 0 0 11 1 1323.6095 CON__P13645;P13645 CON__P13645 335 345 KRT10 Keratin, type I cytoskeletal 10 yes no 2 6.9501E-19 242.35 By matching By MS/MS 4.25 2.33 1 1 2 1 1 1 1 2 6 5345900 731790 4614100 + 2083 50 2151 5002;5003;5004;5005;5006;5007;5008;5009 4204;4205;4206;4207 4205 4 63451 892650 DAEEWFFTK EMRDQYEKMAEKNRKDAEEWFFTKTEELNR AEKNRKDAEEWFFTKTEELNREVATNSELV K D A T K T 1 0 0 1 0 0 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 9 0 1171.5186 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 301 309 KRT14 Keratin, type I cytoskeletal 14 yes no 2 7.4001E-07 185.58 By MS/MS By MS/MS 3.75 0.829 2 1 1 3 1 1864800 844500 1020300 + 2084 39 2152 5010;5011;5012;5013 4208;4209;4210;4211 4210 4 79473 129870 DAEEWFHAK EMREQYEAMAERNRRDAEEWFHAKSAELNK AERNRRDAEEWFHAKSAELNKEVSTNTAMI R D A A K S 2 0 0 1 0 0 2 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1131.4985 CON__P13646-1 CON__P13646-1 291 299 yes yes 2 0.0076888 116.25 By MS/MS 1 0 1 1 56978 0 56978 + 2085 51 2153 5014 4212 4212 1 0 56978 DAEFCLFDR LYRPLEQQHGVIPDRDAEFCLFDRVVNVRE GVIPDRDAEFCLFDRVVNVRENFSVPVGLR R D A D R V 1 1 0 2 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 9 0 1171.4968 Q8IZH2 Q8IZH2 1100 1108 XRN1 5-3 exoribonuclease 1 yes yes 2 0.002505 114.89 By MS/MS 2.5 0.5 1 1 2 182890 182890 0 2086 1893 2154 5015;5016 4213 4213 1 51869 0 DAETWFLSK EMRDQYEQMAEKNRRDAETWFLSKTEELNK AEKNRRDAETWFLSKTEELNKEVASNSELV R D A S K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 9 0 1095.5237 CON__P08779;P08779 CON__P08779 303 311 KRT16 Keratin, type I cytoskeletal 16 yes no 2 6.1428E-05 169.44 By MS/MS By MS/MS 6 2.65 2 1 1 1 1 2 6 2 2896300 2081700 814580 + 2087 47 2155 5017;5018;5019;5020;5021;5022;5023;5024 4214;4215;4216;4217;4218 4217 5 74847 441530 DAEVVLTSR SAYHNLFGLPLISRRDAEVVLTSRELDSLA PLISRRDAEVVLTSRELDSLALNQSTGLPT R D A S R E 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 988.51892 Q96RR1 Q96RR1 257 265 PEO1 Twinkle protein, mitochondrial yes yes 2 0.0014705 131.5 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 3165400 3096400 69021 2088 2225 2156 5025;5026;5027 4219;4220 4220 2 28309 57963 DAFALAK QLVQMFIGDGAKLVRDAFALAKEKAPSIIF GDGAKLVRDAFALAKEKAPSIIFIDELDAI R D A A K E 3 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 734.39629 P17980 P17980 270 276 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.022538 110.34 By MS/MS 6.5 0.5 1 1 2 2546700 2546700 0 2089 647 2157 5028;5029 4221 4221 1 21221 0 DAFDKGSLFGGSVK FPFSENQICLTFTWKDAFDKGSLFGGSVKL KDAFDKGSLFGGSVKLALASLGYEKSCVLF K D A V K L 1 0 0 2 0 0 0 3 0 0 1 2 0 2 0 2 0 0 0 1 0 0 14 1 1426.7092 Q8WUM4 Q8WUM4 97 110 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.040122 87.641 By MS/MS 4 0 1 1 1005400 1005400 0 2090 2018 2158 5030 4222 4222 1 94618 0 DAFLGSFLYEYSR FAEDKDVCKNYQEAKDAFLGSFLYEYSRRH AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 0.00020096 181.68 By MS/MS 6 0 1 1 93142 93142 0 + 2091 43 2159 5031 4223;4224 4223 2 640.28 0 DAFLVFR SGPSPGAKFSHILQKDAFLVFRSLCKLSMK KFSHILQKDAFLVFRSLCKLSMKPLSDGPP K D A F R S 1 1 0 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 7 0 866.46504 Q9Y6D6;Q9Y6D5 Q9Y6D6 422 428 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.012562 128.75 By MS/MS 2.5 0.5 1 1 2 517190 517190 0 2092 2941;2940 2160 5032;5033 4225;4226 4225 2 144400 0 DAFQNAYLELGGLGER ILLHGKEQPLDEELKDAFQNAYLELGGLGE AFQNAYLELGGLGERVLGFCHLFLPDEQFP K D A E R V 2 1 1 1 0 1 2 3 0 0 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1751.8479 P05023 P05023 536 551 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.049015 84.753 By MS/MS 4 0 1 1 60110 60110 0 2093 481 2161 5034 4227 4227 0 5656.8 0 DAFTDSAISAK VVVQFKDMDSSYAKRDAFTDSAISAKVNGE YAKRDAFTDSAISAKVNGEHKEKDLEPWDA R D A A K V 3 0 0 2 0 0 0 0 0 1 0 1 0 1 0 2 1 0 0 0 0 0 11 0 1124.535 Q99700 Q99700 351 361 ATXN2 Ataxin-2 yes yes 2 1.9987E-05 163.88 By MS/MS 3 0 1 1 1605500 1605500 0 2094 2258 2162 5035 4228 4228 1 29377 0 DAFVAIVQSVK DVEHTIKKEMSGDVRDAFVAIVQSVKNKPL GDVRDAFVAIVQSVKNKPLFFADKLYKSMK R D A V K N 2 0 0 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 3 0 0 11 0 1175.655 P08133 P08133 588 598 ANXA6 Annexin A6 yes yes 2 0.006731 99.343 By MS/MS 5 0 1 1 249140 249140 0 2095 517 2163 5036 4229 4229 1 2498.7 0 DAFVYAIK MPATYCEIDLDKEKRDAFVYAIKNHYWYQM DLDKEKRDAFVYAIKNHYWYQMYIDDLPIW R D A I K N 2 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 925.49092 Q9HD45 Q9HD45 118 125 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.0031523 134.06 By MS/MS 3 1.41 1 1 1 1 1 5 1952600 1952600 0 2096 2519 2164 5037;5038;5039;5040;5041 4230;4231;4232 4230 3 193400 0 DAGDEDLKK INKCKNYYEVLGVTKDAGDEDLKKAYRKLA VLGVTKDAGDEDLKKAYRKLALKFHPDKNH K D A K K A 1 0 0 3 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 989.46655 Q8TBM8 Q8TBM8 118 126 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.0077847 117.81 By MS/MS 7 0 1 1 926090 926090 0 2097 1984 2165 5042 4233 4233 1 14538 0 DAGEGGLSLAIEGPSK HGVVNKPATFTVNTKDAGEGGLSLAIEGPS AGEGGLSLAIEGPSKAEISCTDNQDGTCSV K D A S K A 2 0 0 1 0 0 2 4 0 1 2 1 0 0 1 2 0 0 0 0 0 0 16 0 1499.7468 P21333 P21333 1892 1907 FLNA Filamin-A yes yes 2 7.6349E-05 190.34 By MS/MS 2.5 1.12 1 1 1 1 4 1853800 1853800 0 2098 677 2166 5043;5044;5045;5046 4234;4235;4236 4235 3 410770 0 DAGEGLLAVQITDPEGKPK GVPASLPVEFTIDAKDAGEGLLAVQITDPE GLLAVQITDPEGKPKKTHIQDNHDGTYTVA K D A P K K 2 0 0 2 0 1 2 3 0 1 2 2 0 0 2 0 1 0 0 1 0 0 19 1 1937.0106 P21333 P21333 1574 1592 FLNA Filamin-A yes yes 2 3.9241E-11 241.41 By MS/MS 2 0.816 1 1 1 3 759390 759390 0 2099 677 2167 5047;5048;5049 4237;4238 4238 2 211450 0 DAGQISGLNVLR TVPAYFNDSQRQATKDAGQISGLNVLRVIN ATKDAGQISGLNVLRVINEPTAAALAYGLD K D A L R V 1 1 1 1 0 1 0 2 0 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1241.6728 P38646 P38646 207 218 HSPA9 Stress-70 protein, mitochondrial yes yes 2 2.1359E-19 270.36 By MS/MS By MS/MS 6.67 1.89 1 2 2 1 1 1 1 7 2 86151000 85614000 537170 2100 850 2168 5050;5051;5052;5053;5054;5055;5056;5057;5058 4239;4240;4241;4242;4243;4244;4245 4243 7 912180 458360 DAGSGLVTR EPEDPVTERSAFTERDAGSGLVTRLRERPA SAFTERDAGSGLVTRLRERPALLVSSTSWT R D A T R L 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 874.45084 Q9BT22 Q9BT22 264 272 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.002414 116.05 By MS/MS 4.67 2.62 1 1 1 3 2449400 2449400 0 2101 2312 2169 5059;5060;5061 4246;4247;4248;4249 4246 4 53330 0 DAGTIAGLNVLR TVPAYFNDSQRQATKDAGTIAGLNVLRIIN ATKDAGTIAGLNVLRIINEPTAAAIAYGLD K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 P11142 P11142 160 171 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.0732E-19 246.59 By MS/MS By MS/MS 5.36 2.44 1 1 1 1 5 1 1 1 1 1 13 1 162740000 162280000 457370 2102 572 2170 5062;5063;5064;5065;5066;5067;5068;5069;5070;5071;5072;5073;5074;5075 4250;4251;4252;4253;4254;4255;4256;4257;4258;4259;4260;4261;4262;4263;4264 4250 15 1826700 384090 DAGTIAGLNVMR TVPAYFNDAQRQATKDAGTIAGLNVMRIIN ATKDAGTIAGLNVMRIINEPTAAAIAYGLD K D A M R I 2 1 1 1 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 1 0 0 12 0 1216.6234 P11021 P11021 186 197 HSPA5 78 kDa glucose-regulated protein yes yes 2 4.4154E-09 200.71 By MS/MS By MS/MS 5 0 3 2 1 14155000 13800000 355880 2103 571 2171;2172 5076;5077;5078 4265;4266;4267 4265 253 3 138400 298870 DAGVIAGLNVLR TVPAYFNDSQRQATKDAGVIAGLNVLRIIN ATKDAGVIAGLNVLRIINEPTAAAIAYGLD K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1196.6877 P0DMV9;P0DMV8 P0DMV9 160 171 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 1.6937E-12 232.72 By MS/MS By matching 6.56 1.95 1 3 1 1 1 1 1 8 1 48343000 48242000 101030 2104 550 2173 5079;5080;5081;5082;5083;5084;5085;5086;5087 4268;4269;4270;4271;4272;4273;4274;4275;4276 4269 9 499920 84845 DAHLLVESK IRNLLESYHVPELIKDAHLLVESKNLDFQK VPELIKDAHLLVESKNLDFQKTVQLTSSEL K D A S K N 1 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1010.5397 P42704 P42704 641 649 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.002505 114.89 By MS/MS 3.8 0.748 2 2 1 5 7589900 7589900 0 2105 886 2174 5088;5089;5090;5091;5092 4277;4278;4279 4278 3 226460 0 DAHNALLDIQSSGR MVQLGICAFRQGLTKDAHNALLDIQSSGRA KDAHNALLDIQSSGRAKELLGQGLLLRSLQ K D A G R A 2 1 1 2 0 1 0 1 1 1 2 0 0 0 0 2 0 0 0 0 0 0 14 0 1495.7379 Q99613;B5ME19 Q99613 628 641 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.1845E-07 219.89 By MS/MS By MS/MS 4.37 2.08 2 2 2 5 3 1 2 2 18 1 145790000 145670000 123040 2106 2252 2175 5093;5094;5095;5096;5097;5098;5099;5100;5101;5102;5103;5104;5105;5106;5107;5108;5109;5110;5111 4280;4281;4282;4283;4284;4285;4286;4287;4288;4289;4290;4291;4292;4293;4294;4295 4284 16 11803000 262150 DAHQSLLATR VRNHPGLLLMDTTFRDAHQSLLATRVRTHD DTTFRDAHQSLLATRVRTHDLKKIAPYVAH R D A T R V 2 1 0 1 0 1 0 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1110.5782 P11498 P11498 572 581 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0061689 102.95 By MS/MS 3.5 0.5 1 1 2 600950 600950 0 2107 580 2176 5112;5113 4296 4296 1 22948 0 DAHSNLLAK SWLKSLFVRKVDPRKDAHSNLLAKKETSNL KVDPRKDAHSNLLAKKETSNLYKLQFHNVK K D A A K K 2 0 1 1 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 967.50869 O75323 O75323 59 67 GBAS Protein NipSnap homolog 2 yes yes 2 0.049645 76.1 By MS/MS 8 0 1 1 1012500 1012500 0 2108 310 2177 5114 4297 4297 1 12783 0 DAHSTLLSK SWFRSLFVHKVDPRKDAHSTLLSKKETSNL KVDPRKDAHSTLLSKKETSNLYKIQFHNVK K D A S K K 1 0 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 970.50836 Q9BPW8 Q9BPW8 57 65 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.012153 90.601 By MS/MS 8 0 1 1 1589400 1589400 0 2109 2278 2178 5115 4298 4298 1 20066 0 DAIAALGLLQK LRSLLEVVVLSRNSRDAIAALGLLQKAVEG RNSRDAIAALGLLQKAVEGLLDATSGADAD R D A Q K A 3 0 0 1 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1111.6601 A5YKK6 A5YKK6 1654 1664 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00010507 151.44 By MS/MS 3.5 1.12 1 1 1 1 4 1144000 1144000 0 2110 19 2179 5116;5117;5118;5119 4299;4300;4301;4302 4299 4 277120 0 DAIKENPEFDLHFEK QIAWALRDLAVVDAKDAIKENPEFDLHFEK DAIKENPEFDLHFEKIYKWVASSTAEKNAF K D A E K I 1 0 1 2 0 0 3 0 1 1 1 2 0 2 1 0 0 0 0 0 0 0 15 1 1830.8788 Q9NV70 Q9NV70 82 96 EXOC1 Exocyst complex component 1 yes yes 3 0.00037385 156.2 By MS/MS 4 0 1 1 789430 789430 0 2111 2589 2180 5120 4303 4303 1 74291 0 DAINQGMDEELER RFHWTAPAALQVTVRDAINQGMDEELERDE VRDAINQGMDEELERDEKVFLLGEEVAQYD R D A E R D 1 1 1 2 0 1 3 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 13 0 1518.662 P11177 P11177 37 49 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.0031318 109.16 By MS/MS 7 0 1 1 734370 734370 0 2112 575 2181 5121 4304 4304 1 11528 0 DAINQGMDEELERDEK RFHWTAPAALQVTVRDAINQGMDEELERDE AINQGMDEELERDEKVFLLGEEVAQYDGAY R D A E K V 1 1 1 3 0 1 4 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 16 1 1890.8265 P11177 P11177 37 52 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2;3 4.9934E-05 209.11 By MS/MS By matching 7.4 0.49 3 2 4 1 8695900 8657300 38636 2113 575 2182 5122;5123;5124;5125;5126 4305;4306 4306 2 129260 69583 DAIQVVREELKPDQK ETKERLFESMLSECRDAIQVVREELKPDQK DAIQVVREELKPDQKQRDYILEGEPGKVSN R D A Q K Q 1 1 0 2 0 2 2 0 0 1 1 2 0 0 1 0 0 0 0 2 0 0 15 2 1766.9527 Q9UHB9 Q9UHB9 346 360 SRP68 Signal recognition particle subunit SRP68 yes yes 3 0.02614 76.728 By MS/MS 6 0.816 1 1 1 3 13138000 13138000 0 2114 2728 2183 5127;5128;5129 4307 4307 1 111900 0 DAKLDKAQIHDLVLVGGSTR DLFRSTLEPVEKALRDAKLDKAQIHDLVLV KAQIHDLVLVGGSTRIPKVQKLLQDFFNGR R D A T R I 2 1 0 3 0 1 0 2 1 1 3 2 0 0 0 1 1 0 0 2 0 0 20 2 2135.1699 P0DMV9;P0DMV8 P0DMV9 323 342 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 3.5854E-05 117.84 By MS/MS 5 0 1 1 1271700 1271700 0 2115 550 2184 5130 4308 4308 1 12755 0 DAKLDKSQIHDIVLVGGSTR DLFRGTLDPVEKALRDAKLDKSQIHDIVLV KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK R D A T R I 1 1 0 3 0 1 0 2 1 2 2 2 0 0 0 2 1 0 0 2 0 0 20 2 2151.1648 P11142 P11142 323 342 HSPA8 Heat shock cognate 71 kDa protein yes yes 3;4 1.0397E-05 141.3 By MS/MS 5 0 2 2 7287400 7287400 0 2116 572 2185 5131;5132 4309;4310 4309 2 73089 0 DALGAQNASGER APFPKHKPSAKLSVRDALGAQNASGERIKI SVRDALGAQNASGERIKIQGWIRSVRSQKE R D A E R I 3 1 1 1 0 1 1 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1187.5531 Q96I59 Q96I59 32 43 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes yes 2 0.00038499 138.42 By MS/MS 6 0 1 1 1276000 1276000 0 2117 2171 2186 5133 4311 4311 1 8771.7 0 DALKTEFKANAEK LSYIRYSQICAKAVRDALKTEFKANAEKTS VRDALKTEFKANAEKTSGSNVKIVKVKKE_ R D A E K T 3 0 1 1 0 0 2 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 13 2 1463.762 P56381 P56381 25 37 ATP5E ATP synthase subunit epsilon, mitochondrial yes yes 3 0.022539 81.278 By MS/MS 10 0 1 1 215620 215620 0 2118 1071 2187 5134 4312 4312 1 11621 0 DALLLIFANK AHSELAKLLTEKELRDALLLIFANKQDVAG EKELRDALLLIFANKQDVAGALSVEEITEL R D A N K Q 2 0 1 1 0 0 0 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1116.6543 P36406 P36406 505 514 TRIM23 E3 ubiquitin-protein ligase TRIM23 yes yes 2 0.0008012 127.46 By MS/MS 9.5 0.5 1 1 2 167410 167410 0 2119 834 2188 5135;5136 4313 4313 1 6275.9 0 DALNIETAIK AYGSVKAYTNFDAERDALNIETAIKTKGVD FDAERDALNIETAIKTKGVDEVTIVNILTN R D A I K T 2 0 1 1 0 0 1 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1086.5921 P07355;A6NMY6 P07355 38 47 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 0.023679 99.568 By MS/MS 10 0 1 1 35485 0 35485 2120 508 2189 5137 4314 4314 1 0 45430 DALPELLGLEAGSR RRRATVVVGDLHPLRDALPELLGLEAGSRR RDALPELLGLEAGSRRQARSRESNKPRPSE R D A S R R 2 1 0 1 0 0 2 2 0 0 4 0 0 0 1 1 0 0 0 0 0 0 14 0 1439.762 Q9NSI2 Q9NSI2 149 162 FAM207A Protein FAM207A yes yes 2 0.0014981 116.24 By MS/MS 8 0 2 2 65105 65105 0 2121 2571 2190 5138;5139 4315;4316 4315 2 821.95 0 DALRPPLQNINSVQLK DEAKLIAVEIYRWIRDALRPPLQNINSVQL ALRPPLQNINSVQLKELEEEWVKLPTSAPR R D A L K E 1 1 2 1 0 2 0 0 0 1 3 1 0 0 2 1 0 0 0 1 0 0 16 1 1805.0159 Q14008 Q14008 197 212 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.00022384 134.02 By MS/MS 2 0 1 1 272300 272300 0 2122 1417 2191 5140 4317 4317 1 92103 0 DALSDLALHFLNK KTGCNVLLIQKSILRDALSDLALHFLNKMK LRDALSDLALHFLNKMKIMVIKDIEREDIE R D A N K M 2 0 1 2 0 0 0 0 1 0 4 1 0 1 0 1 0 0 0 0 0 0 13 0 1455.7722 P50991 P50991 307 319 CCT4 T-complex protein 1 subunit delta yes yes 2 5.4334E-08 206.73 By MS/MS 6 0 2 2 2784200 2784200 0 2123 985 2192 5141;5142 4318;4319;4320 4318 3 19139 0 DALSLEEILR PREPGAAGGAAGGSRDALSLEEILRLYNQP AGGSRDALSLEEILRLYNQPINEEQAWAVC R D A L R L 1 1 0 1 0 0 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1157.6292 Q08AE8 Q08AE8 38 47 SPIRE1 Protein spire homolog 1 yes yes 2 0.0043033 107.15 By MS/MS 4 0 1 1 39087 39087 0 2124 1315 2193 5143 4321 4321 1 3678.4 0 DANGNSFATR NRERHPGSFDVVHVKDANGNSFATRLSNIF VVHVKDANGNSFATRLSNIFVIGKGNKPWI K D A T R L 2 1 2 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 10 0 1051.4683 P62701;Q8TD47;P22090 P62701 212 221 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.0019299 132.88 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 11042000 10929000 112780 2125 1165 2194 5144;5145;5146;5147 4322;4323 4322 2 155870 152190 DANQVHSTTR LILVADNAGGSHASKDANQVHSTTRRNSNS SHASKDANQVHSTTRRNSNSPPSPSSMNQR K D A T R R 1 1 1 1 0 1 0 0 1 0 0 0 0 0 0 1 2 0 0 1 0 0 10 0 1127.5319 Q7Z5L9 Q7Z5L9 443 452 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.046644 73.951 By MS/MS 5 0 1 1 259310 259310 0 2126 1799 2195 5148 4324 4324 1 2600.8 0 DAPLAVLR LAHQAWPSLVHRLTRDAPLAVLRAFKVLRT LVHRLTRDAPLAVLRAFKVLRTLGSKCGDF R D A L R A 2 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 8 0 853.50215 O43156 O43156 921 928 TTI1 TELO2-interacting protein 1 homolog yes yes 2 0.015747 104.37 By MS/MS 4 0 1 1 952800 952800 0 2127 192 2196 5149 4325 4325 1 89665 0 DAQEMADSLGVR PQYAVILAFDVRIERDAQEMADSLGVRIFS IERDAQEMADSLGVRIFSAEIIYHLFDAFT R D A V R I 2 1 0 2 0 1 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 12 0 1290.5874 O60841 O60841 1044 1055 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 0.010232 90.434 By MS/MS 2.5 0.5 1 1 2 318960 318960 0 2128 283 2197 5150;5151 4326;4327 4326 2 52739 0 DAQIAMMQQR LELELAENRKLLTEKDAQIAMMQQRIDRLA LLTEKDAQIAMMQQRIDRLALLNEKQAASP K D A Q R I 2 1 0 1 0 3 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 10 0 1190.5536 Q14980 Q14980 248 257 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 2 0.041412 76.478 By MS/MS 9 0 1 1 213230 213230 0 2129 1463 2198 5152 4328 4328 1 4196.3 0 DAQPSFSAEDIAK FRTVLIACNVKQMSKDAQPSFSAEDIAKIK SKDAQPSFSAEDIAKIKKFSKTRSKDIFDQ K D A A K I 3 0 0 2 0 1 1 0 0 1 0 1 0 1 1 2 0 0 0 0 0 0 13 0 1377.6412 P25205 P25205 271 283 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0018164 113.07 By MS/MS 4 0 1 1 1514600 1514600 0 2130 719 2199 5153 4329 4329 1 142540 0 DAQQSSSPAADNLR VKINQNLHRLQVAWRDAQQSSSPAADNLRE RDAQQSSSPAADNLREQFERLMTIYLSTKT R D A L R E 3 1 1 2 0 2 0 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 14 0 1458.6699 Q14139 Q14139 545 558 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.0003018 168.61 By MS/MS 3.5 0.5 1 1 2 1090400 1090400 0 2131 1421 2200 5154;5155 4330 4330 1 50397 0 DAQQVEPEGQEKPSPATVR GPIGKERSLKNRKVKDAQQVEPEGQEKPSP VEPEGQEKPSPATVRSTDPVTTKETKAVSE K D A V R S 2 1 0 1 0 3 3 1 0 0 0 1 0 0 3 1 1 0 0 2 0 0 19 1 2065.0076 Q9Y520 Q9Y520 2130 2148 PRRC2C Protein PRRC2C yes yes 3 0.0018069 94.973 By MS/MS 2 0.816 1 1 1 3 2150100 2150100 0 2132 2905 2201 5156;5157;5158 4331;4332;4333 4332 3 482180 0 DAQVPIILAVNK DGVMKQTVESIQHAKDAQVPIILAVNKCDK HAKDAQVPIILAVNKCDKAEADPEKVKKEL K D A N K C 2 0 1 1 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1279.75 P46199 P46199 278 289 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 7.6687E-05 159.09 By MS/MS 5 0 1 1 1671400 1671400 0 2133 910 2202 5159 4334 4334 1 16763 0 DAQVPIILAVNKCDKAEADPEK DGVMKQTVESIQHAKDAQVPIILAVNKCDK LAVNKCDKAEADPEKVKKELLAYDVVCEDY K D A E K V 4 0 1 3 1 1 2 0 0 2 1 3 0 0 2 0 0 0 0 2 0 0 22 2 2423.2366 P46199 P46199 278 299 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 3 0.029453 62.966 By MS/MS 5 0 1 1 1547600 1547600 0 2134 910 2203 5160 4335 4335 1 15521 0 DASAVSLSESK PYKHKVNIGMIDQSRDASAVSLSESKSSQD DQSRDASAVSLSESKSSQDSSDYSTSEMLV R D A S K S 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 4 0 0 0 1 0 0 11 0 1092.5299 P42345 P42345 911 921 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00013392 148.91 By MS/MS 2 0 1 1 644460 644460 0 2135 879 2204 5161 4336 4336 1 217980 0 DASDDLDDLNFFNQK EDKDLEADEEDTRKKDASDDLDDLNFFNQK DASDDLDDLNFFNQKKKKKKTKKIFDIDEA K D A Q K K 1 0 2 5 0 1 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 15 0 1755.7588 P20042 P20042 65 79 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.0311E-32 297.32 By MS/MS 6.5 0.5 1 1 2 9382400 9382400 0 2136 668 2205 5162;5163 4337;4338;4339 4337 3 65371 0 DASDDLDDLNFFNQKK EDKDLEADEEDTRKKDASDDLDDLNFFNQK ASDDLDDLNFFNQKKKKKKTKKIFDIDEAE K D A K K K 1 0 2 5 0 1 0 0 0 0 2 2 0 2 0 1 0 0 0 0 0 0 16 1 1883.8537 P20042 P20042 65 80 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.572E-16 265.75 By MS/MS 6 0 1 1 2336400 2336400 0 2137 668 2206 5164 4340;4341 4340 2 16061 0 DASLMVTNDGATILK LGPKGMDKILLSSGRDASLMVTNDGATILK DASLMVTNDGATILKNIGVDNPAAKVLVDM R D A L K N 2 0 1 2 0 0 0 1 0 1 2 1 1 0 0 1 2 0 0 1 0 0 15 0 1547.7865 P78371 P78371 58 72 CCT2 T-complex protein 1 subunit beta yes yes 2 1.0389E-32 297.18 By MS/MS By MS/MS 6 0 3 2 1 37448000 37358000 89477 2138 1222 2207;2208 5165;5166;5167 4342;4343;4344;4345 4345 712 4 256810 91689 DASPNQVAEK SYVIAGYYQANERVKDASPNQVAEKVASRI NERVKDASPNQVAEKVASRIAEGFSDTALI K D A E K V 2 0 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 10 0 1057.504 O43402 O43402 101 110 EMC8 ER membrane protein complex subunit 8 yes yes 2 0.0068682 101.38 By MS/MS 9.5 0.5 1 1 2 960160 960160 0 2139 208 2209 5168;5169 4346 4346 1 21942 0 DASSSTFPTLTR EIAGVGVPELINSPKDASSSTFPTLTRHTF SPKDASSSTFPTLTRHTFVVFFRVMMAELE K D A T R H 1 1 0 1 0 0 0 0 0 0 1 0 0 1 1 3 3 0 0 0 0 0 12 0 1281.6201 Q9BXW9 Q9BXW9 1217 1228 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.0084257 93.561 By MS/MS 3 0 1 1 513830 513830 0 2140 2362 2210 5170 4347 4347 1 9401.6 0 DASVPLIDVTNLPTPR VQRNKEKGKISSLVKDASVPLIDVTNLPTP ASVPLIDVTNLPTPRKFLDTSHYSTAGSSS K D A P R K 1 1 1 2 0 0 0 0 0 1 2 0 0 0 3 1 2 0 0 2 0 0 16 0 1706.9203 Q96A65 Q96A65 224 239 EXOC4 Exocyst complex component 4 yes yes 2 0.00059413 157.86 By MS/MS 4 0 1 1 1946200 1946200 0 2141 2104 2211 5171 4348 4348 1 183150 0 DATGAEEEAPWAATER PVPPPGAQGVAELLRDATGAEEEAPWAATE ATGAEEEAPWAATERRMPGQCSVLLFPGQG R D A E R R 5 1 0 1 0 0 4 1 0 0 0 0 0 0 1 0 2 1 0 0 0 0 16 0 1702.7435 Q8IVS2 Q8IVS2 41 56 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 7.8383E-33 293.47 By MS/MS 7 0 1 1 1062800 1062800 0 2142 1863 2212 5172 4349 4349 1 16684 0 DATLTALDR IAQVSVDKGLKTILKDATLTALDRGQQQVF LKTILKDATLTALDRGQQQVFKGLNDKVKK K D A D R G 2 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 974.50327 P40939 P40939 391 399 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00040668 149.57 By MS/MS By matching 5 0 2 1 1 4162500 4096300 66200 2143 865 2213 5173;5174 4350 4350 1 41084 55594 DATLTALDRGQQQVFK IAQVSVDKGLKTILKDATLTALDRGQQQVF ATLTALDRGQQQVFKGLNDKVKKKALTSFE K D A F K G 2 1 0 2 0 3 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 16 1 1789.9323 P40939 P40939 391 406 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00036449 190.78 By MS/MS 5 0 1 1 3456100 3456100 0 2144 865 2214 5175 4351 4351 1 34663 0 DATNVAAAFEEAVR CRDNGDYPYFETSAKDATNVAAAFEEAVRR KDATNVAAAFEEAVRRVLATEDRSDHLIQT K D A V R R 5 1 1 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 14 0 1462.7052 P51151 P51151 157 170 RAB9A Ras-related protein Rab-9A yes yes 2 8.115E-33 300.27 By MS/MS 8.5 0.5 1 1 2 786910 786910 0 2145 991 2215 5176;5177 4352 4352 1 14797 0 DATNVAAAFEEAVRR CRDNGDYPYFETSAKDATNVAAAFEEAVRR DATNVAAAFEEAVRRVLATEDRSDHLIQTD K D A R R V 5 2 1 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 15 1 1618.8063 P51151 P51151 157 171 RAB9A Ras-related protein Rab-9A yes yes 2 0.0006445 145.23 By MS/MS 9 0 1 1 358190 358190 0 2146 991 2216 5178 4353 4353 1 7049.1 0 DATNVEESFTILTR LSADCGMKYIETSAKDATNVEESFTILTRD KDATNVEESFTILTRDIYELIKKGEICIQD K D A T R D 1 1 1 1 0 0 2 0 0 1 1 0 0 1 0 1 3 0 0 1 0 0 14 0 1594.7839 Q14964 Q14964 160 173 RAB39A Ras-related protein Rab-39A yes yes 2 5.662E-05 208.08 By MS/MS 9 0 1 1 161060 161060 0 2147 1461 2217 5179 4354 4354 1 3169.7 0 DATNVGDEGGFAPNILENK VYHNLKNVIKEKYGKDATNVGDEGGFAPNI VGDEGGFAPNILENKEGLELLKTAIGKAGY K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2 7.4306E-18 308.2 By MS/MS 7 0.816 1 1 1 3 3065500 3065500 0 2148 500 2218 5180;5181;5182 4355 4355 1 23807 0 DATNVGDEGGFAPNILENKEGLELLK VYHNLKNVIKEKYGKDATNVGDEGGFAPNI APNILENKEGLELLKTAIGKAGYTDKVVIG K D A L K T 2 0 3 2 0 0 4 4 0 1 4 2 0 1 1 0 1 0 0 1 0 0 26 1 2742.3712 P06733 P06733 203 228 ENO1 Alpha-enolase yes yes 3 4.8181E-08 119.16 By MS/MS 6 0 1 1 3166500 3166500 0 2149 500 2219 5183 4356 4356 1 21767 0 DATSRPTDNILIPQLIR MVLAGASEFDPQYNKDATSRPTDNILIPQL TSRPTDNILIPQLIREIGSINLKKNEPPLT K D A I R E 1 2 1 2 0 1 0 0 0 3 2 0 0 0 2 1 2 0 0 0 0 0 17 1 1922.0585 Q9UGP8 Q9UGP8 263 279 SEC63 Translocation protein SEC63 homolog yes yes 2;3 0.012519 118.08 By MS/MS 4.75 0.829 2 1 1 4 1217300 1217300 0 2150 2724 2220 5184;5185;5186;5187 4357;4358 4358 2 83106 0 DAVDFDVR TSKKEDAENLAAAQRDAVDFDVRVDTQDQG NLAAAQRDAVDFDVRVDTQDQGMYRFLTSQ R D A V R V 1 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 935.43486 Q9Y6D6 Q9Y6D6 1655 1662 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.010564 110.12 By MS/MS 3 0.816 1 1 1 3 1619000 1619000 0 2151 2941 2221 5188;5189;5190 4359 4359 1 245260 0 DAVEDLESVGK DGAKKAVGGLGKLGKDAVEDLESVGKGAVH KLGKDAVEDLESVGKGAVHDVKDVLDSVL_ K D A G K G 1 0 0 2 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1160.5561 P81605 P81605 86 96 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 2 0.0004262 151.83 By matching By MS/MS 5.82 2.92 1 1 1 1 1 1 1 1 2 1 1 10 2270400 128470 2142000 2152 1228 2222 5191;5192;5193;5194;5195;5196;5197;5198;5199;5200;5201 4360;4361;4362;4363;4364;4365;4366 4360 7 2528.3 1375400 DAVFLAER VQAAIWQALNHYAYRDAVFLAERLYAEVHS LNHYAYRDAVFLAERLYAEVHSEEALFLLA R D A E R L 2 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 919.47633 P30260 P30260 23 30 CDC27 Cell division cycle protein 27 homolog yes yes 2 0.038995 86.67 By MS/MS 4 0 1 1 660780 660780 0 2153 771 2223 5202 4367 4367 1 62184 0 DAVLLLFANK VADELQKMLLVDELRDAVLLLFANKQDLPN VDELRDAVLLLFANKQDLPNAMAISEMTDK R D A N K Q 2 0 1 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1102.6386 P18085 P18085 118 127 ARF4 ADP-ribosylation factor 4 yes yes 2 0.00031327 162.97 By MS/MS 9.5 0.5 1 1 2 340780 340780 0 2154 651 2224 5203;5204 4368;4369 4368 2 10586 0 DAVLLVFANK AREELMRMLAEDELRDAVLLVFANKQDLPN EDELRDAVLLVFANKQDLPNAMNAAEITDK R D A N K Q 2 0 1 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 10 0 1088.623 P84085;P84077;P61204 P84077 118 127 ARF5;ARF1;ARF3 ADP-ribosylation factor 5;ADP-ribosylation factor 1;ADP-ribosylation factor 3 no no 2 7.5592E-08 195.06 By MS/MS 9.5 0.5 1 1 2 1152000 1152000 0 2155 1116;1244 2225 5205;5206 4370 4370 1 34335 0 DAVLYFSESLVPTAR GVCIGLSEIMKSTSRDAVLYFSESLVPTAR DAVLYFSESLVPTARKALCDPLEEVREAAA R D A A R K 2 1 0 1 0 0 1 0 0 0 2 0 0 1 1 2 1 0 1 2 0 0 15 0 1666.8566 Q92616 Q92616 1997 2011 GCN1L1 Translational activator GCN1 yes yes 2 0.0084962 103.91 By MS/MS 2 0 1 1 70743 70743 0 2156 2064 2226 5207 4371;4372 4371 2 23928 0 DAVPAFIEPNVR EQEEETQPGRLLGRRDAVPAFIEPNVRFWI GRRDAVPAFIEPNVRFWITERQSFIRRFLQ R D A V R F 2 1 1 1 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 12 0 1326.6932 Q6P4A7 Q6P4A7 19 30 SFXN4 Sideroflexin-4 yes yes 2 0.046933 70.942 By MS/MS 7.5 0.5 1 1 2 7414600 7414600 0 2157 1710 2227 5208;5209 4373 4373 1 110720 0 DAVQLNVIATR IFHCAATVRFNENLRDAVQLNVIATRQLIL ENLRDAVQLNVIATRQLILLAQQMKNLEVF R D A T R Q 2 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1198.667 Q8WVX9 Q8WVX9 123 133 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.00068497 127.87 By MS/MS 6 0 1 1 2960600 2960600 0 2158 2031 2228 5210 4374 4374 1 20352 0 DAVSNTTNQLESK EAEIAHLKQENGILRDAVSNTTNQLESKQS LRDAVSNTTNQLESKQSAELNKLRQDYARL R D A S K Q 1 0 2 1 0 1 1 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 13 0 1405.6685 Q86UP2 Q86UP2 431 443 KTN1 Kinectin yes yes 2 1.6558E-11 234.24 By MS/MS 3 0 1 1 712020 712020 0 2159 1823 2229 5211 4375 4375 1 13028 0 DAYSGGAVNLYHVR AYDLARRAIYQATYRDAYSGGAVNLYHVRE RDAYSGGAVNLYHVREDGWIRVSSDNVADL R D A V R E 2 1 1 1 0 0 0 2 1 0 1 0 0 0 0 1 0 0 2 2 0 0 14 0 1520.7372 P28074 P28074 226 239 PSMB5 Proteasome subunit beta type-5 yes yes 2;3 1.5865E-16 253.71 By MS/MS 9.33 0.471 2 1 3 15808000 15808000 0 2160 751 2230 5212;5213;5214 4376;4377;4378 4376 3 345100 0 DAYVQALAR CAIRIACIFSIQLERDAYVQALARFTLLTV SIQLERDAYVQALARFTLLTVSSGITEMKQ R D A A R F 3 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1005.5243 Q9Y6D6;Q9Y6D5 Q9Y6D6 997 1005 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.0040624 110.87 By MS/MS 2.5 0.5 1 1 2 1307200 1307200 0 2161 2941;2940 2231 5215;5216 4379;4380 4379 2 319440 0 DCDHADEQKCYSCGEFGHIQK EQCCYNCGKPGHLARDCDHADEQKCYSCGE EQKCYSCGEFGHIQKDCTKVKCYRCGETGH R D C Q K D 1 0 0 3 3 2 2 2 2 1 0 2 0 1 0 1 0 0 1 0 0 0 21 1 2583.0213 P62633 P62633 110 130 CNBP Cellular nucleic acid-binding protein yes yes 4 0.00043651 91.065 By MS/MS 9 0 1 1 612810 612810 0 2162 1163 2232 5217 4381 4381 1 12060 0 DCDLQEDACYNCGR PDICYRCGESGHLAKDCDLQEDACYNCGRG KDCDLQEDACYNCGRGGHIAKDCKEPKRER K D C G R G 1 1 1 3 3 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 14 0 1774.6345 P62633 P62633 66 79 CNBP Cellular nucleic acid-binding protein yes yes 2 9.6058E-56 340.93 By MS/MS 9.5 0.5 1 1 2 4825400 4825400 0 2163 1163 2233 5218;5219 4382;4383 4383 2 132660 0 DCDPGEVNK KPLTKSCEIKFLTFKDCDPGEVNKAYWRSC KFLTFKDCDPGEVNKAYWRSCAMMMGCVIE K D C N K A 0 0 1 2 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 9 0 1032.4182 Q9NYK5 Q9NYK5 132 140 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.037059 81.548 By MS/MS 7 0 1 1 662620 662620 0 2164 2635 2234 5220 4384 4384 1 10402 0 DCEDPNPLIR SQPDMAIMAVNTFVKDCEDPNPLIRALAVR NTFVKDCEDPNPLIRALAVRTMGCIRVDKI K D C I R A 0 1 1 2 1 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 10 0 1227.5554 Q10567 Q10567 94 103 AP1B1 AP-1 complex subunit beta-1 no no 2 0.0052152 105.1 By MS/MS 4 0 1 1 1007600 1007600 0 2165 1322 2235 5221 4385 4385 1 94824 0 DCEECIQLEPTFIK AACYTKLLEFQLALKDCEECIQLEPTFIKG KDCEECIQLEPTFIKGYTRKAAALEAMKDY K D C I K G 0 0 0 1 2 1 3 0 0 2 1 1 0 1 1 0 1 0 0 0 0 0 14 0 1780.8012 P31948 P31948 416 429 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.00041366 179.59 By MS/MS 5.5 0.5 1 1 2 1287900 1287900 0 2166 795 2236 5222;5223 4386 4386 1 11847 0 DCGEYAHTR SRNRQFSYLIENMARDCGEYAHTRYFRGGM IENMARDCGEYAHTRYFRGGMLTNARLLFG R D C T R Y 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1107.4404 Q9Y399 Q9Y399 161 169 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.00078147 138.06 By MS/MS 8.5 0.5 1 1 2 2556300 2556300 0 2167 2860 2237 5224;5225 4387 4387 1 33504 0 DCGGAAQLAGPAAEADPLGR ______________________________ AQLAGPAAEADPLGRFTCPVCLEVYEKPVQ R D C G R F 6 1 0 2 1 1 1 4 0 0 2 0 0 0 2 0 0 0 0 0 0 0 20 0 1895.8796 Q9Y508 Q9Y508 7 26 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 2 2.7867E-19 268.18 By MS/MS 8.5 0.5 1 1 2 1344100 1344100 0 2168 2903 2238 5226;5227 4388;4389;4390 4390 3 20773 0 DCGSVSTVDEFPEAR KGELDLSLENLDLSKDCGSVSTVDEFPEAR DCGSVSTVDEFPEARGEHVHSLPEASVSSK K D C A R G 1 1 0 2 1 0 2 1 0 0 0 0 0 1 1 2 1 0 0 2 0 0 15 0 1667.7097 Q01804 Q01804 902 916 OTUD4 OTU domain-containing protein 4 yes yes 2 4.6649E-10 184.98 By matching By MS/MS 3 0 2 1 1 418570 277340 141240 2169 1270 2239 5228;5229 4391 4391 1 5074.5 17977 DCHEEVYAGSHQYPGR ANKPLLDEIVPVYRRDCHEEVYAGSHQYPG CHEEVYAGSHQYPGRGVYLLKFDNSYSLWR R D C G R G 1 1 0 1 1 1 2 2 2 0 0 0 0 0 1 1 0 0 2 1 0 0 16 0 1903.7908 Q9H3P7 Q9H3P7 486 501 ACBD3 Golgi resident protein GCP60 yes yes 3 0.00012279 180.27 By MS/MS 5 0 1 1 905330 905330 0 2170 2440 2240 5230 4392 4392 1 9080 0 DCIQYIK KNMDAIIVDSEKTGRDCIQYIKEQRGEPET VDSEKTGRDCIQYIKEQRGEPETFLPLDYL R D C I K E 0 0 0 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 7 0 938.45315 Q14683 Q14683 555 561 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.012522 128.86 By MS/MS 2.5 0.5 1 1 2 1010800 1010800 0 2171 1451 2241 5231;5232 4393 4393 1 28471 0 DCLFRPLNK KGIYEIYSLALVTWRDCLFRPLNKQVTNAV ALVTWRDCLFRPLNKQVTNAVLKLIEKERN R D C N K Q 0 1 1 1 1 0 0 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 9 1 1161.5965 Q13616 Q13616 169 177 CUL1 Cullin-1 yes yes 2 0.028449 107.9 By MS/MS 4.5 0.5 1 1 2 2569600 2569600 0 2172 1402 2242 5233;5234 4394 4394 1 220610 0 DCLILVLR LKAVQPLLKVSMSMRDCLILVLRKAMFANQ KVSMSMRDCLILVLRKAMFANQLDARKSAV R D C L R K 0 1 0 1 1 0 0 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 8 0 1000.5739 Q9NVI1 Q9NVI1 515 522 FANCI Fanconi anemia group I protein yes yes 2 0.026969 91.906 By MS/MS 3 0 1 1 140760 140760 0 2173 2597 2243 5235 4395 4395 1 2575.4 0 DCLNVLNK IAQLKVVQTKYVEAKDCLNVLNKSNEGKEL TKYVEAKDCLNVLNKSNEGKELLVPLTSSM K D C N K S 0 0 2 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 974.48552 Q99471 Q99471 48 55 PFDN5 Prefoldin subunit 5 yes yes 2 0.0015009 148.04 By MS/MS 10 0 1 1 1558400 1558400 0 2174 2247 2244 5236 4396 4396 1 83992 0 DCPLNAEAASSK WKDIPNENEAQFQIRDCPLNAEAASSKLQS QIRDCPLNAEAASSKLQSSNIFTVAKRNVE R D C S K L 3 0 1 1 1 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 12 0 1261.5609 Q10567 Q10567 865 876 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.0010402 139.76 By MS/MS 4 0 1 1 798560 798560 0 2175 1322 2245 5237 4397 4397 1 75150 0 DCPVPLPGDGDLLVR TRLSPNFREAVTLSRDCPVPLPGDGDLLVR DCPVPLPGDGDLLVRNRFVGVNASDINYSA R D C V R N 0 1 0 3 1 0 0 2 0 0 3 0 0 0 3 0 0 0 0 2 0 0 15 0 1621.8134 Q8N4Q0 Q8N4Q0 54 68 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 0.044849 80.737 By MS/MS 7 0 1 1 0 0 0 2176 1917 2246 5238 4398 4398 1 0 0 DCQLNAHK PLVLFCESCDTLTCRDCQLNAHKDHQYQFL CDTLTCRDCQLNAHKDHQYQFLEDAVRNQR R D C H K D 1 0 1 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 984.44471 Q13263 Q13263 231 238 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.043599 84.916 By MS/MS 4 0 1 1 677160 677160 0 2177 1367 2247 5239 4399 4399 1 63726 0 DCSGPLSALTELNTK VKFDLEVKALIQDIRDCSGPLSALTELNTK DCSGPLSALTELNTKVKEKFQQLRHRIQDL R D C T K V 1 0 1 1 1 0 1 1 0 0 3 1 0 0 1 2 2 0 0 0 0 0 15 0 1604.7716 Q12981 Q12981 32 46 BNIP1 Vesicle transport protein SEC20 yes yes 2 3.8862E-07 218.02 By MS/MS 8 0 1 1 307990 307990 0 2178 1343 2248 5240 4400;4401 4401 2 3888.3 0 DDANNDPQWSEEQLIAAK EGYKFYPPKVELFFKDDANNDPQWSEEQLI NNDPQWSEEQLIAAKFCFAGLLIGQTEVDI K D D A K F 3 0 2 3 0 2 2 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 18 0 2042.9181 P22234 P22234 132 149 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 1.3861E-11 242.91 By MS/MS 7 0 1 1 837690 837690 0 2179 689 2249 5241 4402 4402 1 13150 0 DDDFPSLQAIAR AHGDASSHQALHAARDDDFPSLQAIARIIT AARDDDFPSLQAIARIIT____________ R D D A R I 2 1 0 3 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 12 0 1346.6466 Q86UK7 Q86UK7 890 901 ZNF598 Zinc finger protein 598 yes yes 2 0.003794 133.75 By MS/MS 4 0 1 1 0 0 0 2180 1821 2250 5242 4403 4403 1 0 0 DDDIAALVVDNGSGMCK ______________________________ DIAALVVDNGSGMCKAGFAGDDAPRAVFPS M D D C K A 2 0 1 4 1 0 0 2 0 1 1 1 1 0 0 1 0 0 0 2 0 0 17 0 1778.7815 P60709 P60709 2 18 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 2 3.6643E-45 333.44 By MS/MS By MS/MS 7.12 2.52 1 3 2 1 1 6 2 4262500 4107400 155030 2181 1095 2251;2252 5243;5244;5245;5246;5247;5248;5249;5250 4404;4405;4406;4407 4406 614 4 66913 213620 DDEIGFRSVGLISK D D S K 0 1 0 2 0 0 1 2 0 2 1 1 0 1 0 2 0 0 0 1 0 0 14 1 1534.7991 REV__Q92878 yes yes 2 0.0023601 154.24 By MS/MS 7.2 1.17 2 1 1 1 5 16932000 16932000 0 + 2182 2979 2253 5251;5252;5253;5254;5255 4408 4408 1 137210 0 DDEVQVVR ELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ RSMPIRKDDEVQVVRGHYKGQQIGKVVQVY K D D V R G 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 8 0 958.47197 P61254;Q9UNX3 P61254 52 59 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.0020096 143.12 By MS/MS 9 0 1 1 2547800 2547800 0 2183 1119;2794 2254 5256 4409 4409 1 50140 0 DDFLGSFCR INHRFAGQMAALCSRDDFLGSFCRYHLTEP AALCSRDDFLGSFCRYHLTEPGLASRHLLS R D D C R Y 0 1 0 2 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 0 0 0 9 0 1115.4706 Q9NXE4 Q9NXE4 769 777 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.00059678 143.73 By MS/MS 4.5 0.5 1 1 2 1023700 1023700 0 2184 2624 2255 5257;5258 4410;4411 4410 2 55779 0 DDFTEFGK NNAVYGIDAMNPSSRDDFTEFGKLLKDKIT AMNPSSRDDFTEFGKLLKDKITQYEKSLYY R D D G K L 0 0 0 2 0 0 1 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 8 0 957.40798 O75822 O75822 154 161 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 2 0.018484 101.33 By MS/MS 7 0 1 1 861790 861790 0 2185 349 2256 5259 4412 4412 1 13529 0 DDGSWEVIEGYR KPCNHVLSLSFPIRRDDGSWEVIEGYRAQH IRRDDGSWEVIEGYRAQHSQHRTPCKGGIR R D D Y R A 0 1 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 1 1 1 0 0 12 0 1424.6208 P00367;P49448 P00367 125 136 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.0002051 150.15 By MS/MS 6 0 1 1 4370200 4370200 0 2186 441 2257 5260 4413 4413 1 30042 0 DDGVSIPGEYTSFLAPISSSK ELSPECLDGAQHFLKDDGVSIPGEYTSFLA PGEYTSFLAPISSSKLYNEVRACREKDRDP K D D S K L 1 0 0 2 0 0 1 2 0 2 1 1 0 1 2 5 1 0 1 1 0 0 21 0 2169.0477 O14744 O14744 459 479 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0012954 98.439 By matching By MS/MS 5 0 2 1 1 147520 67178 80338 2187 137 2258 5261;5262 4414;4415 4415 2 673.76 67467 DDIENMVK REQQIVIQSSGGLSKDDIENMVKNAEKYAE SSGGLSKDDIENMVKNAEKYAEEDRRKKER K D D V K N 0 0 1 2 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 8 0 962.4379 P38646 P38646 556 563 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.001574 147.34 By MS/MS 5 0 1 1 841260 841260 0 2188 850 2259 5263 4416 4416 1 8437.4 0 DDIIENAPTTHTEEYSGEEK MFWMRVPLVAPEDLRDDIIENAPTTHTEEY NAPTTHTEEYSGEEKTWMWWHNFRTLCDYS R D D E K T 1 0 1 2 0 0 5 1 1 2 0 1 0 0 1 1 3 0 1 0 0 0 20 0 2276.9921 O14744 O14744 165 184 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.0056229 85.054 By MS/MS By matching 5 0 2 1 1 3813900 3258800 555080 2189 137 2260 5264;5265 4417 4417 1 32684 466150 DDKDTIEK PNTPIILVGTKLDLRDDKDTIEKLKEKKLT GTKLDLRDDKDTIEKLKEKKLTPITYPQGL R D D E K L 0 0 0 3 0 0 1 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 8 1 962.45566 P63000;P15153 P63000 121 128 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 yes no 2 0.0098007 143.37 By MS/MS 9 0 1 1 542950 542950 0 2190 1192 2261 5266 4418 4418 1 10685 0 DDKHGSYEDAVHSGALND ILRIDDLIKLHPESKDDKHGSYEDAVHSGA HGSYEDAVHSGALND_______________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 P17987 P17987 539 556 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.2968E-16 244.23 By MS/MS By MS/MS 5.56 2.87 1 1 1 3 1 1 1 8 1 40207000 40106000 100580 2191 648 2262 5267;5268;5269;5270;5271;5272;5273;5274;5275 4419;4420;4421;4422;4423;4424 4423 6 533140 103070 DDPSTIEK PKTPFLLVGTQIDLRDDPSTIEKLAKNKQK GTQIDLRDDPSTIEKLAKNKQKPITPETAE R D D E K L 0 0 0 2 0 0 1 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 8 0 903.41854 P60953 P60953 121 128 CDC42 Cell division control protein 42 homolog yes yes 2 0.021009 98.523 By MS/MS 9 0 1 1 1051500 1051500 0 2192 1100 2263 5276 4425 4425 1 20693 0 DDRDRDDR GPAEESSSWRDSSRRDDRDRDDRRRERDDR WRDSSRRDDRDRDDRRRERDDRRDLRERRD R D D D R R 0 3 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 1061.4486 Q14152 Q14152 1266 1273 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.043384 122.18 By MS/MS 7 0 1 1 132050 132050 0 2193 1422 2264 5277 4426 4426 1 2073 0 DDREQFYK NDESGANVDASKMWRDDREQFYKIAKQIVQ DASKMWRDDREQFYKIAKQIVQKSLGL___ R D D Y K I 0 1 0 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 8 1 1099.4934 P60604 P60604 146 153 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes yes 3 0.0015526 148.99 By MS/MS 9.5 0.5 1 1 2 258830 258830 0 2194 1093 2265 5278;5279 4427 4427 1 12239 0 DDRVEERDPPR EREEVSSWRRADDRKDDRVEERDPPRRVPP DDRKDDRVEERDPPRRVPPPALSRDRERDR K D D P R R 0 3 0 3 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 11 2 1382.6539 Q14152 Q14152 1318 1328 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.052971 66.595 By MS/MS 7 0 1 1 421200 421200 0 2195 1422 2266 5280 4428 4428 1 6612.1 0 DDSIEGIYDTLK TNRPQLSSCFLLSMKDDSIEGIYDTLKQCA SMKDDSIEGIYDTLKQCALISKSAGGIGVA K D D L K Q 0 0 0 3 0 0 1 1 0 2 1 1 0 0 0 1 1 0 1 0 0 0 12 0 1367.6456 P23921 P23921 225 236 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 2 1.7687E-05 177.57 By MS/MS 4 0 1 1 632760 632760 0 2196 711 2267 5281 4429 4429 1 59547 0 DDVAQTDLLQIDPNFGSK KVKGLVLGPIHKNQKDDVAQTDLLQIDPNF AQTDLLQIDPNFGSKEDFDSLLQSAKKKSI K D D S K E 1 0 1 4 0 2 0 1 0 1 2 1 0 1 1 1 1 0 0 1 0 0 18 0 1974.9535 P08195 P08195 270 287 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 2.7277E-58 359.59 By MS/MS 4.5 0.5 1 1 2 1127400 1127400 0 2197 519 2268 5282;5283 4430;4431 4431 2 52748 0 DEAGHFLWPGFGENAR GAQLPRIFHVNWFRRDEAGHFLWPGFGENA EAGHFLWPGFGENARVLDWICRRLEGEDSA R D E A R V 2 1 1 1 0 0 2 3 1 0 1 0 0 2 1 0 0 1 0 0 0 0 16 0 1801.8172 Q16822 Q16822 538 553 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2;3 0.00090592 114.71 By MS/MS 5.5 0.5 2 2 4 1798100 1798100 0 2198 1560 2269 5284;5285;5286;5287 4432;4433;4434;4435 4434 4 14770 0 DEAQVCAIIER QNTDPHSQEYVEHLKDEAQVCAIIERVQRY EHLKDEAQVCAIIERVQRYLEEKGTTEEVC K D E E R V 2 1 0 1 1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1302.6238 Q99613;B5ME19 Q99613 475 485 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00024342 139.32 By MS/MS 4 0 1 1 2049800 2049800 0 2199 2252 2270 5288 4436 4436 1 192900 0 DEDFKQYVNK CVTYEHLITKPVLGKDEDFKQYVNKNSKHE PVLGKDEDFKQYVNKNSKHEELMLGDPCLK K D E N K N 0 0 1 2 0 1 1 0 0 0 0 2 0 1 0 0 0 0 1 1 0 0 10 1 1284.5986 P07814 P07814 638 647 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00063003 152.06 By MS/MS 3 0 1 1 576560 576560 0 2200 512 2271 5289 4437 4437 1 10549 0 DEGGKAFFK IMYTGTLDCWRKIARDEGGKAFFKGAWSNV WRKIARDEGGKAFFKGAWSNVLRGMGGAFV R D E F K G 1 0 0 1 0 0 1 2 0 0 0 2 0 2 0 0 0 0 0 0 0 0 9 1 997.4869 P05141;P12236 P05141 264 272 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0070586 125.31 By MS/MS By matching 3.29 2.05 2 1 1 1 1 1 6 1 31492000 31436000 55495 2201 487;589 2272 5290;5291;5292;5293;5294;5295;5296 4438;4439;4440;4441;4442 4442 5 6307100 55495 DEIIWLLR GPKALFVFMALSFARDEIIWLLRHADNMPK MALSFARDEIIWLLRHADNMPKKSADDFID R D E L R H 0 1 0 1 0 0 1 0 0 2 2 0 0 0 0 0 0 1 0 0 0 0 8 0 1056.5968 Q9Y2A7 Q9Y2A7 380 387 NCKAP1 Nck-associated protein 1 yes yes 2 0.0041579 129.4 By MS/MS 4 0 1 1 55063 55063 0 2202 2824 2273 5297 4443 4443 1 5181.8 0 DEILPTTPISEQK PKKPLPDHVSIVEPKDEILPTTPISEQKGG PKDEILPTTPISEQKGGKPEPPAMPQPVPT K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 P23396 P23396 215 227 RPS3 40S ribosomal protein S3 yes yes 2 0.00034426 147.74 By MS/MS By MS/MS 6.22 3.12 1 1 1 1 3 1 1 8 1 94759000 94065000 694660 2203 703 2274 5298;5299;5300;5301;5302;5303;5304;5305;5306 4444;4445;4446;4447;4448;4449;4450;4451;4452 4446 8 1573500 937410 DEILPTTPISEQKGGKPEPPAMPQPVPTA PKKPLPDHVSIVEPKDEILPTTPISEQKGG GKPEPPAMPQPVPTA_______________ K D E T A - 2 0 0 1 0 2 3 2 0 2 1 2 1 0 8 1 3 0 0 1 0 0 29 2 3024.5478 P23396 P23396 215 243 RPS3 40S ribosomal protein S3 yes yes 3 0.00096562 68.361 By MS/MS 8 0 2 2 3821000 3821000 0 2204 703 2275;2276 5307;5308 4453;4454 4453 348 2 48240 0 DELLQVLR AFRLYDLDKDEKISRDELLQVLRMMVGVNI KDEKISRDELLQVLRMMVGVNISDEQLGSI R D E L R M 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 984.5604 Q99653 Q99653 133 140 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.0027294 136.16 By MS/MS 8.5 0.5 1 1 2 351960 351960 0 2205 2257 2277 5309;5310 4455 4455 1 6113.2 0 DENILIDLRR IQHCHSRGVVHRDIKDENILIDLRRGCAKL HRDIKDENILIDLRRGCAKLIDFGSGALLH K D E R R G 0 2 1 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 10 1 1255.6884 Q9P1W9 Q9P1W9 166 175 PIM2 Serine/threonine-protein kinase pim-2 yes yes 2 0.0041291 119.62 By MS/MS By matching 8.75 0.829 2 1 1 3 1 1393000 1356800 36167 2206 2672 2278 5311;5312;5313;5314 4456 4456 1 30410 48806 DEPSVAAMVYPFTGDHK RAVQGMLDFDYVCSRDEPSVAAMVYPFTGD PSVAAMVYPFTGDHKQKFYWGHKEILIPVF R D E H K Q 2 0 0 2 0 0 1 1 1 0 0 1 1 1 2 1 1 0 1 2 0 0 17 0 1862.8509 P53396 P53396 522 538 ACLY ATP-citrate synthase yes yes 2 0.0004364 129.76 By MS/MS 4 0 1 1 361410 361410 0 2207 1030 2279 5315 4457 4457 1 34011 0 DEPTGEVLSLVGK LVLQADRSLIDRTRRDEPTGEVLSLVGKLE RRDEPTGEVLSLVGKLEGTRMGDKAQRTKP R D E G K L 0 0 0 1 0 0 2 2 0 0 2 1 0 0 1 1 1 0 0 2 0 0 13 0 1342.698 O75643 O75643 34 46 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.049105 68.536 By MS/MS 1.5 0.5 1 1 2 198520 198520 0 2208 340 2280 5316;5317 4458 4458 1 60654 0 DEQLESLFQR YSILRHVAEVLEYTKDEQLESLFQRTAWVF LEYTKDEQLESLFQRTAWVFDDKYKRPGYG K D E Q R T 0 1 0 1 0 2 2 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 10 0 1263.6095 P05198 P05198 124 133 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 7.7919E-15 237.44 By MS/MS 7 0 1 1 607650 607650 0 2209 489 2281 5318 4459 4459 1 9539.1 0 DEQNEEKKR MQAMKAQFERDLQTRDEQNEEKKRLLIKQV RDLQTRDEQNEEKKRLLIKQVRELEAELED R D E K R L 0 1 1 1 0 1 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1174.5578 P35580 P35580 1584 1592 MYH10 Myosin-10 yes yes 2 0.0054594 139.97 By MS/MS 2 0 1 1 47619 47619 0 2210 825 2282 5319 4460 4460 1 16107 0 DESSPYAAMLAAQDVAQR TICRVTGGMKVKADRDESSPYAAMLAAQDV SPYAAMLAAQDVAQRCKELGITALHIKLRA R D E Q R C 5 1 0 2 0 2 1 0 0 0 1 0 1 0 1 2 0 0 1 1 0 0 18 0 1921.884 P62263 P62263 67 84 RPS14 40S ribosomal protein S14 yes yes 2;3 2.0224E-11 240.42 By MS/MS 10 0 3 3 2400600 2400600 0 2211 1147 2283;2284 5320;5321;5322 4461;4462;4463;4464 4464 652 4 129380 0 DETEFYLGK REHTALLKIEGVYARDETEFYLGKRCAYVY EGVYARDETEFYLGKRCAYVYKAKNNTVTP R D E G K R 0 0 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1100.5026 P18077 P18077 37 45 RPL35A 60S ribosomal protein L35a yes yes 2 0.0012346 131.03 By MS/MS 10 0 1 1 451030 451030 0 2212 650 2285 5323 4465 4465 1 24309 0 DETEFYLGKR REHTALLKIEGVYARDETEFYLGKRCAYVY GVYARDETEFYLGKRCAYVYKAKNNTVTPG R D E K R C 0 1 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 10 1 1256.6037 P18077 P18077 37 46 RPL35A 60S ribosomal protein L35a yes yes 2 1.8908E-07 197.3 By MS/MS 10 0 1 1 1708200 1708200 0 2213 650 2286 5324 4466 4466 1 92064 0 DETNYGIPQR SASRDKTIIMWKLTRDETNYGIPQRALRGH WKLTRDETNYGIPQRALRGHSHFVSDVVIS R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 P63244 P63244 48 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 1.0112E-14 234.2 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 32516000 31960000 556000 2214 1202 2287 5325;5326;5327;5328 4467;4468;4469;4470 4468 4 433170 750300 DEVASLLFDPK QRLALPQSDASLLSRDEVASLLFDPKEAAT LLSRDEVASLLFDPKEAATIDRDTAFAIGC R D E P K E 1 0 0 2 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 11 0 1232.6289 Q9H583 Q9H583 24 34 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.00028152 132.01 By MS/MS 2 0 1 1 123210 123210 0 2215 2451 2288 5329 4471 4471 1 41674 0 DEYIEQLK EKGLKVLKWNFTTPRDEYIEQLKTQMSSCV WNFTTPRDEYIEQLKTQMSSCVAKWLQDEM R D E L K T 0 0 0 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1036.5077 Q14008 Q14008 1190 1197 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.047932 83.265 By MS/MS 2.5 0.5 1 1 2 709390 709390 0 2216 1417 2289 5330;5331 4472 4472 1 204830 0 DFADILVQPTLEENK EEEREFRKQFPLHEKDFADILVQPTLEENK DFADILVQPTLEENKGTSDGQEEEAGTNPA K D F N K G 1 0 1 2 0 1 2 0 0 1 2 1 0 1 1 0 1 0 0 1 0 0 15 0 1730.8727 Q9NU22 Q9NU22 3584 3598 MDN1 Midasin yes yes 2 0.0002567 205.31 By MS/MS 1 0 1 1 111550 111550 0 2217 2580 2290 5332 4473 4473 1 26881 0 DFALDSEESR SIKIAMTTCEQIVRKDFALDSEESRMRIAA QIVRKDFALDSEESRMRIAAHHMMRNLTAG K D F S R M 1 1 0 2 0 0 2 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 10 0 1167.5044 A5YKK6 A5YKK6 1427 1436 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 5.9862E-08 196.79 By MS/MS 2 0 1 1 404360 404360 0 2218 19 2291 5333 4474 4474 1 136770 0 DFASEVSNVLNK VSNCGKIFHLEVCSRDFASEVSNVLNKGHP CSRDFASEVSNVLNKGHPKVCEKLKALMVE R D F N K G 1 0 2 1 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 0 0 12 0 1321.6514 Q92783 Q92783 88 99 STAM Signal transducing adapter molecule 1 yes yes 2 8.3427E-09 173.64 By MS/MS 5 0 1 1 201190 201190 0 2219 2070 2292 5334 4475 4475 0 2017.8 0 DFESHITSYK KALSTLRQKIRKYNRDFESHITSYKQNPEQ RKYNRDFESHITSYKQNPEQSADEDAEKNE R D F Y K Q 0 0 0 1 0 0 1 0 1 1 0 1 0 1 0 2 1 0 1 0 0 0 10 0 1225.5615 Q99613;B5ME19 Q99613 151 160 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.0001525 150.36 By MS/MS 4.58 2.06 1 1 1 3 3 1 1 1 12 53694000 53694000 0 2220 2252 2293 5335;5336;5337;5338;5339;5340;5341;5342;5343;5344;5345;5346 4476;4477;4478;4479;4480;4481;4482;4483;4484;4485 4483 9 4414400 0 DFFQSYGNVVELR FIGNLPHEVDKSELKDFFQSYGNVVELRIN LKDFFQSYGNVVELRINSGGKLPNFGFVVF K D F L R I 0 1 1 1 0 1 1 1 0 0 1 0 0 2 0 1 0 0 1 2 0 0 13 0 1572.7573 Q13283 Q13283 358 370 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 1.4841E-13 248.21 By MS/MS 5 0 1 1 327600 327600 0 2221 1368 2294 5347 4486 4486 1 3285.6 0 DFHILFVPR IAENVLSEDRRGPTRDFHILFVPRRSLLCE RRGPTRDFHILFVPRRSLLCEQRLKDLGVL R D F P R R 0 1 0 1 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 9 0 1142.6237 Q96AX1 Q96AX1 108 116 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2;3 0.012097 93.143 By MS/MS 5 0 2 2 1607700 1607700 0 2222 2109 2295 5348;5349 4487;4488;4489 4489 3 16125 0 DFIDSLGLLHEQNMAK SAKLASYVKFYQNNKDFIDSLGLLHEQNMA FIDSLGLLHEQNMAKMRLLTFMGMAVENKE K D F A K M 1 0 1 2 0 1 1 1 1 1 3 1 1 1 0 1 0 0 0 0 0 0 16 0 1829.8982 Q7L2H7 Q7L2H7 261 276 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 0.023429 74.133 By MS/MS 7 0 1 1 236180 236180 0 2223 1762 2296 5350 4490 4490 929 1 3707.7 0 DFIIFEAAPQETR GNVAAILELDEHLQKDFIIFEAAPQETRGI QKDFIIFEAAPQETRGIPSKKPVADYFL__ K D F T R G 2 1 0 1 0 1 2 0 0 2 0 0 0 2 1 0 1 0 0 0 0 0 13 0 1535.762 P60510 P60510 282 294 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 2 0.00039895 142.08 By MS/MS 8 0 1 1 273670 273670 0 2224 1092 2297 5351 4491 4491 1 3455.1 0 DFIIQTGDPTGTGR KIKYYNYCLIHNVQRDFIIQTGDPTGTGRG RDFIIQTGDPTGTGRGGESIFGQLYGDQAS R D F G R G 0 1 0 2 0 1 0 3 0 2 0 0 0 1 1 0 3 0 0 0 0 0 14 0 1476.7209 Q8WUA2 Q8WUA2 48 61 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2 0.00029276 169.09 By MS/MS 5 0 1 1 1125900 1125900 0 2225 2013 2298 5352 4492 4492 1 11292 0 DFILPISDVR HLSLSHQPDKKGVPRDFILPISDVRASIGA KGVPRDFILPISDVRASIGAGFIYPLVGTM R D F V R A 0 1 0 2 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1173.6394 Q6UB35 Q6UB35 926 935 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0091116 96.331 By MS/MS 6.22 2.3 1 2 1 1 1 1 1 1 9 8870400 8870400 0 2226 1728 2299 5353;5354;5355;5356;5357;5358;5359;5360;5361 4493;4494;4495;4496 4493 4 694590 0 DFKDGTFDPDNLEK AAQLFSEAVAPAIEKDFKDGTFDPDNLEKY KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY K D F E K Y 0 0 1 4 0 0 1 1 0 0 1 2 0 2 1 0 1 0 0 0 0 0 14 1 1639.7366 Q8IXM3 Q8IXM3 103 116 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 3.9886E-16 262.11 By MS/MS 10 0 1 1 481570 481570 0 2227 1878 2300 5362 4497 4497 1 25955 0 DFKENNVVFNR GVVLHKDSKWYQQWKDFKENNVVFNRFFEM QQWKDFKENNVVFNRFFEMKMKYDESDNAF K D F N R F 0 1 3 1 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 2 0 0 11 1 1380.6786 O43615 O43615 247 257 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 8.1429E-06 182.64 By MS/MS 7 0 1 1 3712000 3712000 0 2228 221 2301 5363 4498 4498 1 58272 0 DFLAGGIAAAISK ______________________________ AKDFLAGGIAAAISKTAVAPIERVKLLLQV K D F S K T 4 0 0 1 0 0 0 2 0 2 1 1 0 1 0 1 0 0 0 0 0 0 13 0 1232.6765 P12236 P12236 11 23 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 5.7347E-08 218.55 By MS/MS By MS/MS 6.08 2.73 1 1 1 1 1 1 1 4 1 1 12 1 14709000 14640000 68711 2229 589 2302 5364;5365;5366;5367;5368;5369;5370;5371;5372;5373;5374;5375;5376 4499;4500;4501;4502;4503;4504;4505;4506;4507;4508;4509;4510;4511 4504 13 1004400 92721 DFLAGGVAAAISK ______________________________ AKDFLAGGVAAAISKTAVAPIERVKLLLQV K D F S K T 4 0 0 1 0 0 0 2 0 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1218.6608 P05141 P05141 11 23 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 7.5372E-05 176.18 By MS/MS By MS/MS 5 3.2 4 3 1 1 1 1 1 4 2 1 17 2 130080000 129550000 525590 2230 487 2303 5377;5378;5379;5380;5381;5382;5383;5384;5385;5386;5387;5388;5389;5390;5391;5392;5393;5394;5395 4512;4513;4514;4515;4516;4517;4518;4519;4520;4521;4522;4523;4524;4525;4526;4527;4528;4529;4530;4531 4513 20 5994600 691800 DFLHLFEK QDKFHELMSQLQNPKDFLHLFEKNMIPERT SQLQNPKDFLHLFEKNMIPERTVEFQHIIP K D F E K N 0 0 0 1 0 0 1 0 1 0 2 1 0 2 0 0 0 0 0 0 0 0 8 0 1047.5389 A4D1E9 A4D1E9 301 308 GTPBP10 GTP-binding protein 10 yes yes 2 0.044696 84.498 By MS/MS 7 0 1 1 571350 571350 0 2231 15 2304 5396 4532 4532 1 8969.2 0 DFLIPIGK MYGVPFEFPPEAQSKDFLIPIGKAKIERQG PPEAQSKDFLIPIGKAKIERQGTHITVVSH K D F G K A 0 0 0 1 0 0 0 1 0 2 1 1 0 1 1 0 0 0 0 0 0 0 8 0 901.5273 P11177 P11177 220 227 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.051818 81.784 By MS/MS By matching 7.75 0.829 2 1 1 3 1 8184600 8120600 63986 2232 575 2305 5397;5398;5399;5400 4533 4533 1 123020 115240 DFLLKPELLR DIKGSYVSIHSSGFRDFLLKPELLRAIVDC SSGFRDFLLKPELLRAIVDCGFEHPSEVQH R D F L R A 0 1 0 1 0 0 1 0 0 0 4 1 0 1 1 0 0 0 0 0 0 0 10 1 1242.7336 O00148;Q13838 O00148 48 57 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.048623 94.692 By MS/MS 6 0 1 1 1736700 1736700 0 2233 83 2306 5401 4534 4534 1 11939 0 DFNQFIK KEKLLTQGFTNWNKRDFNQFIKANEKWGRD GFTNWNKRDFNQFIKANEKWGRDDIENIAR R D F I K A 0 0 1 1 0 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 910.45487 O60264;P28370 O60264 849 855 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.034026 101.69 By MS/MS 4 0.816 1 1 1 3 1832400 1832400 0 2234 251;755 2307 5402;5403;5404 4535 4535 1 51588 0 DFPAVDSVLVK FVWKQLSGEEVSWSKDFPAVDSVLVKLLEV SWSKDFPAVDSVLVKLLEVMEGMDKETFEF K D F V K L 1 0 0 2 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 3 0 0 11 0 1188.639 Q5T447 Q5T447 637 647 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 2 0.028238 81.338 By MS/MS 4 0 1 1 372750 372750 0 2235 1631 2308 5405 4536 4536 1 35078 0 DFPLSGYVELR RILTDYGFEGHPFRKDFPLSGYVELRYDDE PFRKDFPLSGYVELRYDDEVKRVVAEPVEL K D F L R Y 0 1 0 1 0 0 1 1 0 0 2 0 0 1 1 1 0 0 1 1 0 0 11 0 1294.6558 O75489 O75489 201 211 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 9.6618E-08 202.2 By MS/MS 8 0 1 1 871970 871970 0 2236 330 2309 5406 4537 4537 1 11009 0 DFQKDFVK VVGTERGRAFVNTRKDFQKDFVKYCVEEEE AFVNTRKDFQKDFVKYCVEEEEKAAEMHKM K D F V K Y 0 0 0 2 0 1 0 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 8 1 1025.5182 P78347 P78347 71 78 GTF2I General transcription factor II-I yes yes 2 0.011539 139.97 By MS/MS 3 0 1 1 1432300 1432300 0 2237 1221 2310 5407 4538 4538 1 26206 0 DFSLEQLR GEESPATSLPRMKKRDFSLEQLRQYDGSRN LPRMKKRDFSLEQLRQYDGSRNPRILLAVN R D F L R Q 0 1 0 1 0 1 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 1006.5084 O15173 O15173 102 109 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 0.0026677 136.75 By MS/MS 7.5 1.12 1 1 1 1 4 5029000 5029000 0 2238 168 2311 5408;5409;5410;5411 4539 4539 1 69116 0 DFSPSGIFGAFQR LEVKLGELPSWILMRDFSPSGIFGAFQRGY MRDFSPSGIFGAFQRGYYRYYNKYINVKKG R D F Q R G 1 1 0 1 0 1 0 2 0 1 0 0 0 3 1 2 0 0 0 0 0 0 13 0 1427.6834 P56134 P56134 34 46 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.00027303 155.11 By MS/MS 10 0 1 1 288710 288710 0 2239 1066 2312 5412 4540 4540 1 15560 0 DFSPTIIEDQAR KFLNILDQVCIQCYKDFSPTIIEDQAREHI CYKDFSPTIIEDQAREHIRQNLESFIRQDF K D F A R E 1 1 0 2 0 1 1 0 0 2 0 0 0 1 1 1 1 0 0 0 0 0 12 0 1390.6729 Q5VYS8 Q5VYS8 1011 1022 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 0.015628 87.568 By MS/MS 2 0 1 1 138100 138100 0 2240 1657 2313 5413 4541 4541 1 46711 0 DFSSIIQTCSGNIQR LDMYRNPGPSGPQLRDFSSIIQTCSGNIQR DFSSIIQTCSGNIQRISQATAQIKNLMSQL R D F Q R I 0 1 1 1 1 2 0 1 0 3 0 0 0 1 0 3 1 0 0 0 0 0 15 0 1724.8152 Q86Y82 Q86Y82 21 35 STX12 Syntaxin-12 yes yes 2 7.5175E-24 279.75 By MS/MS 7 0 1 1 747540 747540 0 2241 1851 2314 5414 4542 4542 1 11735 0 DFSVFFQK EMALKNKAAKGSATKDFSVFFQKIRETGER AKGSATKDFSVFFQKIRETGERPSNEEIMR K D F Q K I 0 0 0 1 0 1 0 0 0 0 0 1 0 3 0 1 0 0 0 1 0 0 8 0 1016.4967 O95202 O95202 285 292 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 1.1547E-06 197.65 By MS/MS 4.5 0.5 1 1 2 599860 599860 0 2242 394 2315 5415;5416 4543;4544 4544 2 16150 0 DFTATDLSEFAAK AAKRTPFGAYGGLLKDFTATDLSEFAAKAA LKDFTATDLSEFAAKAALSAGKVSPETVDS K D F A K A 3 0 0 2 0 0 1 0 0 0 1 1 0 2 0 1 2 0 0 0 0 0 13 0 1414.6616 P42765 P42765 26 38 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 6.4217E-17 284.62 By MS/MS 7 0 1 1 2686800 2686800 0 2243 887 2316 5417 4545;4546 4545 2 42178 0 DFTPAELRR SDDDEPPPLPRLKRRDFTPAELRRFDGVQD PRLKRRDFTPAELRRFDGVQDPRILMAING R D F R R F 1 2 0 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 9 1 1103.5724 O00264 O00264 72 80 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 0.038085 98.458 By MS/MS 8.5 0.5 1 1 2 5831200 5831200 0 2244 96 2317 5418;5419 4547 4547 1 92077 0 DFTVASPAEFVTR LVKQGRDRKKIDSQRDFTVASPAEFVTRFG QRDFTVASPAEFVTRFGGNKVIEKVLIANN R D F T R F 2 1 0 1 0 0 1 0 0 0 0 0 0 2 1 1 2 0 0 2 0 0 13 0 1438.7092 Q13085;O00763 Q13085 99 111 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 2 0.0004064 152.54 By MS/MS 1 0 1 1 0 0 0 2245 1351 2318 5420 4548 4548 1 0 0 DFTVLVDR DLQHVAKETGGFVARDFTVLVDRAIHSRLS TGGFVARDFTVLVDRAIHSRLSRQSISTRE R D F D R A 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 963.50255 O43933 O43933 783 790 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0032547 133.58 By MS/MS 3 0 1 1 417070 417070 0 2246 247 2319 5421 4549 4549 1 7631.2 0 DFTVSAMHGDMDQK TRRKVDWLTEKMHARDFTVSAMHGDMDQKE RDFTVSAMHGDMDQKERDVIMREFRSGSSR R D F Q K E 1 0 0 3 0 1 0 1 1 0 0 1 2 1 0 1 1 0 0 1 0 0 14 0 1580.6599 P60842 P60842 296 309 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 4.1978E-33 307.97 By MS/MS 5.45 2.64 3 3 1 6 5 1 3 22 117570000 117570000 0 2247 1097 2320;2321;2322 5422;5423;5424;5425;5426;5427;5428;5429;5430;5431;5432;5433;5434;5435;5436;5437;5438;5439;5440;5441;5442;5443 4550;4551;4552;4553;4554;4555;4556;4557;4558;4559;4560;4561;4562;4563;4564 4559 621;622 15 1510300 0 DFTVSAMHGDMDQKER TRRKVDWLTEKMHARDFTVSAMHGDMDQKE FTVSAMHGDMDQKERDVIMREFRSGSSRVL R D F E R D 1 1 0 3 0 1 1 1 1 0 0 1 2 1 0 1 1 0 0 1 0 0 16 1 1865.8036 P60842 P60842 296 311 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 2.1687E-23 258.23 By MS/MS 5.64 2.71 4 4 1 2 9 5 3 3 2 33 571660000 571660000 0 2248 1097 2323;2324;2325 5444;5445;5446;5447;5448;5449;5450;5451;5452;5453;5454;5455;5456;5457;5458;5459;5460;5461;5462;5463;5464;5465;5466;5467;5468;5469;5470;5471;5472;5473;5474;5475;5476 4565;4566;4567;4568;4569;4570;4571;4572;4573;4574;4575;4576;4577;4578;4579;4580;4581;4582;4583;4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594 4590 621;622 29 5451700 0 DFTVSAMHGDMDQKERDVIMR TRRKVDWLTEKMHARDFTVSAMHGDMDQKE MHGDMDQKERDVIMREFRSGSSRVLITTDL R D F M R E 1 2 0 4 0 1 1 1 1 1 0 1 3 1 0 1 1 0 0 2 0 0 21 2 2480.1246 P60842 P60842 296 316 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 3;4 0.00046461 107.57 By MS/MS 6 0 3 3 33001000 33001000 0 2249 1097 2326;2327 5477;5478;5479 4595;4596;4597;4598 4596 621;622;623 4 226860 0 DFVNYLVR GNSTNKKDAQSNAARDFVNYLVRINEIKSE AQSNAARDFVNYLVRINEIKSEEVPAFGVA R D F V R I 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 8 0 1024.5342 Q08211 Q08211 64 71 DHX9 ATP-dependent RNA helicase A yes yes 2 3.2374E-06 187.34 By MS/MS 4 2 1 1 1 1 1 1 1 7 2022300 2022300 0 2250 1307 2328 5480;5481;5482;5483;5484;5485;5486 4599;4600;4601;4602;4603 4602 5 109550 0 DFVQVMR RVEGMTELYFQLKSKDFVQVMRHRDDERQK LYFQLKSKDFVQVMRHRDDERQKVCLDIIY K D F M R H 0 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 2 0 0 7 0 893.44292 P78527 P78527 2419 2425 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0057158 152.63 By MS/MS 2 0 1 1 215730 215730 0 2251 1225 2329 5487 4604 4604 1 72970 0 DFYDKIEAK YELLEAVEILSKLPKDFYDKIEAKKWQERK LSKLPKDFYDKIEAKKWQERKEALESVEVL K D F A K K 1 0 0 2 0 0 1 0 0 1 0 2 0 1 0 0 0 0 1 0 0 0 9 1 1127.5499 Q14008 Q14008 283 291 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.016597 112.11 By MS/MS 2 0 1 1 1312000 1312000 0 2252 1417 2330 5488 4605 4605 1 443770 0 DFYVAFQDLPTR LKTFVKDRKEIPLAKDFYVAFQDLPTRHKI LAKDFYVAFQDLPTRHKIRELTSSRIGLLT K D F T R H 1 1 0 2 0 1 0 0 0 0 1 0 0 2 1 0 1 0 1 1 0 0 12 0 1470.7143 Q14566 Q14566 109 120 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.00028065 145.23 By MS/MS 4 0 1 1 428020 428020 0 2253 1444 2331 5489 4606 4606 1 40280 0 DGADFAK QGLDGLSERCAQYKKDGADFAKWRCVLKIG ERCAQYKKDGADFAKWRCVLKIGEHTPSAL K D G A K W 2 0 0 2 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 7 0 722.32352 P04075;P09972 P04075 141 147 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C no no 2 0.043702 94.407 By MS/MS 7 0 1 1 804220 804220 0 2254 467;545 2332 5490 4607 4607 1 12625 0 DGAFAEFLR GKISEMGSYQELLARDGAFAEFLRTYASTE QELLARDGAFAEFLRTYASTEQEQDAEENG R D G L R T 2 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 9 0 1024.4978 P33527 P33527 859 867 ABCC1 Multidrug resistance-associated protein 1 yes yes 2 0.0058724 107.69 By MS/MS 2 0.816 1 1 1 3 266200 266200 0 2255 802 2333 5491;5492;5493 4608 4608 1 59128 0 DGAGDVAFIR QEPYFSYSGAFKCLRDGAGDVAFIRESTVF FKCLRDGAGDVAFIRESTVFEDLSDEAERD R D G I R E 2 1 0 2 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1019.5036 P02788 P02788 220 229 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.0049141 117.81 By MS/MS By MS/MS 3 3.02 3 2 1 1 3 4 800820 209680 591150 2256 459 2334 5494;5495;5496;5497;5498;5499;5500 4609;4610;4611;4612;4613 4611 5 57358 738410 DGAGNSFDLSSLSR QYACPPFDLTECSFKDGAGNSFDLSSLSRY KDGAGNSFDLSSLSRYSDNWEAITGTGDPE K D G S R Y 1 1 1 2 0 0 0 2 0 0 2 0 0 1 0 4 0 0 0 0 0 0 14 0 1424.6532 P11717 P11717 1373 1386 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 4.1741E-05 190.35 By MS/MS 2 0.816 1 1 1 3 652420 652420 0 2257 583 2335 5501;5502;5503 4614;4615;4616 4616 3 181420 0 DGAPVATNAFHSPR YVPELAHSPLYIQDKDGAPVATNAFHSPRW KDGAPVATNAFHSPRWGGIMVYNVDSKTYN K D G P R W 3 1 1 1 0 0 0 1 1 0 0 0 0 1 2 1 1 0 0 1 0 0 14 0 1438.6953 Q96S52 Q96S52 342 355 PIGS GPI transamidase component PIG-S yes yes 2 0.0010459 124.38 By MS/MS 5 0 1 1 557880 557880 0 2258 2230 2336 5504 4617 4617 1 5595.3 0 DGAWGAFR LQKVLQGDLVMNVYRDGAWGAFRHFLLEED LVMNVYRDGAWGAFRHFLLEEDKPEEPTAH R D G F R H 2 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 8 0 878.4035 P49327 P49327 1508 1515 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0068584 116.88 By MS/MS 2.5 0.957 1 2 2 1 6 2270400 2270400 0 2259 946 2337 5505;5506;5507;5508;5509;5510 4618;4619;4620;4621 4618 4 427680 0 DGAYYQLFVR TSVTCHGGYVYTTGRDGAYYQLFVRDGQLQ YTTGRDGAYYQLFVRDGQLQPVLRQKSCRG R D G V R D 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 2 1 0 0 10 0 1230.6033 Q9NNW5 Q9NNW5 588 597 WDR6 WD repeat-containing protein 6 yes yes 2 0.0074741 100.02 By MS/MS 1.5 0.5 1 1 2 102970 102970 0 2260 2521 2338 5511;5512 4622 4622 1 30484 0 DGDDVIIIGVFK SKEILTLKQVQEFLKDGDDVIIIGVFKGES FLKDGDDVIIIGVFKGESDPAYQQYQDAAN K D G F K G 0 0 0 3 0 0 0 2 0 3 0 1 0 1 0 0 0 0 0 2 0 0 12 0 1289.6867 P13667 P13667 302 313 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.0015041 115.78 By MS/MS 5 0 1 1 54849 54849 0 2261 604 2339 5513 4623 4623 1 550.11 0 DGDESSPILTSFELVK VKCDDKEYGIVYYEKDGDESSPILTSFELV GDESSPILTSFELVKVPDPQMSMENLVESK K D G V K V 0 0 0 2 0 0 2 1 0 1 2 1 0 1 1 3 1 0 0 1 0 0 16 0 1735.8516 Q8NEB9 Q8NEB9 239 254 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.00031453 154.67 By MS/MS 4 0 1 1 120600 120600 0 2262 1961 2340 5514 4624;4625;4626 4625 3 11350 0 DGDILGK GTKVVLDDKDYFLFRDGDILGKYVD_____ DKDYFLFRDGDILGKYVD____________ R D G G K Y 0 0 0 2 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 716.37047 P61604 P61604 93 99 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.01426 124.34 By MS/MS 10 0 1 1 477690 477690 0 2263 1126 2341 5515 4627 4627 1 25746 0 DGEDLMDESVLK RLKEFLKNYLTNLLKDGEDLMDESVLKFYT LLKDGEDLMDESVLKFYTQQWEDYRFSSKV K D G L K F 0 0 0 3 0 0 2 1 0 0 2 1 1 0 0 1 0 0 0 1 0 0 12 0 1349.6021 Q13616 Q13616 106 117 CUL1 Cullin-1 yes yes 2 5.6664E-06 185.61 By MS/MS 4 0 1 1 621470 621470 0 2264 1402 2342 5516 4628 4628 1 58485 0 DGEDQTQDTELVETRPAGDGTFQK ALGFYPAEITLTWQRDGEDQTQDTELVETR ELVETRPAGDGTFQKWAAVVVPSGQEQRYT R D G Q K W 1 1 0 4 0 3 3 3 0 0 1 1 0 1 1 0 4 0 0 1 0 0 24 1 2636.1838 P10321;P01893;P04439 P10321 244 267 HLA-C;HLA-H;HLA-A HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, A-3 alpha chain no no 3 3.3545E-05 168.62 By MS/MS 7.5 0.5 1 1 2 13467000 13467000 0 2265 558;474 2343 5517;5518 4629 4629 1 210150 0 DGEDQTQDTELVETRPAGDR ALGFYPAEITLTWQRDGEDQTQDTELVETR TQDTELVETRPAGDRTFQKWAAVVVPSGEE R D G D R T 1 2 0 4 0 2 3 2 0 0 1 0 0 0 1 0 3 0 0 1 0 0 20 1 2230.9938 P01889 P01889 244 263 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 3 1.613E-06 195.6 By MS/MS 7.67 0.943 2 1 3 2945500 2945500 0 2266 456 2344 5519;5520;5521 4630;4631;4632 4630 3 46239 0 DGEDQTQDTELVETRPAGDRTFQK ALGFYPAEITLTWQRDGEDQTQDTELVETR ELVETRPAGDRTFQKWAAVVVPSGEEQRYT R D G Q K W 1 2 0 4 0 3 3 2 0 0 1 1 0 1 1 0 4 0 0 1 0 0 24 2 2735.2634 P01889 P01889 244 267 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 4 0.022041 54.15 By MS/MS 7 0 1 1 1255600 1255600 0 2267 456 2345 5522 4633 4633 1 19711 0 DGEQHEDLNEVAK WNIFNRMPIARKIIKDGEQHEDLNEVAKLF IKDGEQHEDLNEVAKLFNIHED________ K D G A K L 1 0 1 2 0 1 3 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 13 0 1482.6587 O95831 O95831 594 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.049233 68.463 By MS/MS 5 0 1 1 486820 486820 0 2268 429 2346 5523 4634 4634 1 4882.5 0 DGETLEELMKLSPEELLLR DIELSRNEALAALLRDGETLEELMKLSPEE LEELMKLSPEELLLRWANFHLENSGWQKIN R D G L R W 0 1 0 1 0 0 5 1 0 0 6 1 1 0 1 1 1 0 0 0 0 0 19 1 2214.1454 P13797 P13797 257 275 PLS3 Plastin-3 yes yes 3 0.033188 62.055 By MS/MS 5 0 1 1 1485400 1485400 0 2269 605 2347 5524 4635 4635 290 0 14898 0 DGFFTLDSALLR ELKTTAVCTQVRRTRDGFFTLDSALLRTQW RTRDGFFTLDSALLRTQWDLTNIQDAIRAA R D G L R T 1 1 0 2 0 0 0 1 0 0 3 0 0 2 0 1 1 0 0 0 0 0 12 0 1353.6929 O95900 O95900 260 271 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.00027025 145.9 By MS/MS 7 0 1 1 50143 50143 0 2270 432 2348 5525 4636 4636 1 787.15 0 DGFGFIK FTNEAREMGVIAAMRDGFGFIKCVDRDVRM MGVIAAMRDGFGFIKCVDRDVRMFFHFSEI R D G I K C 0 0 0 1 0 0 0 2 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 782.39629 O75534 O75534 358 364 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0077586 144.29 By MS/MS 4 0 1 1 2060400 2060400 0 2271 333 2349 5526 4637 4637 1 193890 0 DGFVCALLR DDRAFYLEARFVSLRDGFVCALLRFRQHLL RFVSLRDGFVCALLRFRQHLLGTSPERVVQ R D G L R F 1 1 0 1 1 0 0 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1049.5328 Q8WUY1 Q8WUY1 142 150 THEM6 Protein THEM6 yes yes 2 0.0012944 130.27 By MS/MS 9 0 1 1 677130 677130 0 2272 2019 2350 5527 4638 4638 1 13326 0 DGGGRGPDELEGPDSK GPGPSLRPQNSTTWRDGGGRGPDELEGPDS GGGRGPDELEGPDSKLHHGHDPRGGLQPSG R D G S K L 0 1 0 3 0 0 2 5 0 0 1 1 0 0 2 1 0 0 0 0 0 0 16 1 1584.7016 P48634 P48634 209 224 PRRC2A Protein PRRC2A yes yes 3 0.024672 69.431 By MS/MS 2 0 1 1 291900 291900 0 2273 938 2351 5528 4639 4639 1 98732 0 DGGVCLLSGTK GVCTFAVGPEQGGCKDGGVCLLSGTKGASF GGCKDGGVCLLSGTKGASFGRLQSMKLDYR K D G T K G 0 0 0 1 1 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1105.5438 P11717 P11717 1852 1862 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0022974 111.06 By MS/MS 2.5 1.12 1 1 1 1 4 1060600 1060600 0 2274 583 2352 5529;5530;5531;5532 4640 4640 1 155420 0 DGGVQACFSR VMTPELAGVIKRLWRDGGVQACFSRSREYQ KRLWRDGGVQACFSRSREYQLNDSASYYLN R D G S R S 1 1 0 1 1 1 0 2 0 0 0 0 0 1 0 1 0 0 0 1 0 0 10 0 1095.4767 P08754 P08754 133 142 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 2 0.038789 77.744 By MS/MS 7 0 1 1 653360 653360 0 2275 528 2353 5533 4641 4641 1 10257 0 DGIDDESYGQIFKPIISK GAGKGKYYAVNFPMRDGIDDESYGQIFKPI DDESYGQIFKPIISKVMEMYQPSAVVLQCG R D G S K V 0 0 0 3 0 1 1 2 0 4 0 2 0 1 1 2 0 0 1 0 0 0 18 1 2024.0102 Q92769 Q92769 231 248 HDAC2 Histone deacetylase 2 yes yes 3 0.013443 77.222 By MS/MS 6 0 1 1 1433500 1433500 0 2276 2069 2354 5534 4642;4643 4642 2 9854.1 0 DGIILCELINK VTGMSIGPNFQLGLKDGIILCELINKLQPG LGLKDGIILCELINKLQPGSVKKVNESSLN K D G N K L 0 0 1 1 1 0 1 1 0 3 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1286.6904 Q15417 Q15417 54 64 CNN3 Calponin-3 yes yes 2 0.00043379 132.88 By MS/MS 7 0 1 1 204840 204840 0 2277 1510 2355 5535 4644 4644 1 3215.6 0 DGIVLGADTR KVRKTGTTIAGVVYKDGIVLGADTRATEGM GVVYKDGIVLGADTRATEGMVVADKNCSKI K D G T R A 1 1 0 2 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1015.5298 Q99436 Q99436 53 62 PSMB7 Proteasome subunit beta type-7 yes yes 2 0.032041 90.108 By MS/MS 8 0 1 1 0 0 0 2278 2243 2356 5536 4645 4645 1 0 0 DGKYSQVLANGLDNK YKIPDWFLNRQKDVKDGKYSQVLANGLDNK DGKYSQVLANGLDNKLREDLERLKKIRAHR K D G N K L 1 0 2 2 0 1 0 2 0 0 2 2 0 0 0 1 0 0 1 1 0 0 15 1 1620.8107 P62269 P62269 92 106 RPS18 40S ribosomal protein S18 yes yes 2;3 6.1507E-16 265.77 By MS/MS 9.5 0.5 2 2 4 3335700 3335700 0 2279 1149 2357 5537;5538;5539;5540 4646;4647 4646 2 85215 0 DGLIVYEDSPLVK RDTTVQTLTLQPSVKDGLIVYEDSPLVKAV VKDGLIVYEDSPLVKAVKLGHILVVDEADK K D G V K A 0 0 0 2 0 0 1 1 0 1 2 1 0 0 1 1 0 0 1 2 0 0 13 0 1446.7606 A3KMH1 A3KMH1 824 836 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00036794 167.09 By MS/MS 3 0.816 1 1 1 3 986330 986330 0 2280 14 2358 5541;5542;5543 4648;4649;4650 4648 3 185930 0 DGLLENQTPEFFQDVCKPK LGPVGGVFNLAVVLRDGLLENQTPEFFQDV ENQTPEFFQDVCKPKYSGTLNLDRVTREAC R D G P K Y 0 0 1 2 1 2 2 1 0 0 2 2 0 2 2 0 1 0 0 1 0 0 19 1 2264.0783 P49327 P49327 1977 1995 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.0031506 89.311 By MS/MS 1.5 0.5 1 1 2 559800 559800 0 2281 946 2359 5544;5545 4651 4651 1 185580 0 DGLNDDDFEPYLSPQAR KGQGNKVQNGSVHQKDGLNDDDFEPYLSPQ LNDDDFEPYLSPQARPNNAYTAMSDSYLPS K D G A R P 1 1 1 4 0 1 1 1 0 0 2 0 0 1 2 1 0 0 1 0 0 0 17 0 1950.8595 Q9Y5A9 Q9Y5A9 27 43 YTHDF2 YTH domain-containing family protein 2 yes yes 2 2.4381E-12 247.73 By MS/MS 5 0 2 2 2430700 2430700 0 2282 2908 2360 5546;5547 4652;4653 4652 2 24379 0 DGLQLAADIASLQNR ILVPHSLRQAQASFRDGLQLAADIASLQNR DGLQLAADIASLQNRIDWGRSQLRGLQEKL R D G N R I 3 1 1 2 0 2 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1583.8267 Q96NT0 Q96NT0 143 157 CCDC115 Coiled-coil domain-containing protein 115 yes yes 2 0.00025096 174.46 By MS/MS 9 0 1 1 121960 121960 0 2283 2204 2361 5548 4654 4654 1 2400.3 0 DGLTDVYNK STPYGGVKLEDLIVKDGLTDVYNKIHMGSC EDLIVKDGLTDVYNKIHMGSCAENTAKKLN K D G N K I 0 0 1 2 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 1023.4873 P24752 P24752 182 190 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.00059678 143.73 By MS/MS 7.5 0.5 1 1 2 4855900 4855900 0 2284 716 2362 5549;5550 4655 4655 1 75285 0 DGLTISFTK KGLDVKSEACQRFFRDGLTISFTKILTDEA CQRFFRDGLTISFTKILTDEAVSGWKFEIH R D G T K I 0 0 0 1 0 0 0 1 0 1 1 1 0 1 0 1 2 0 0 0 0 0 9 0 980.51786 Q93008;O00507 Q93008 122 130 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.025226 86.67 By MS/MS 2 0 1 1 291210 291210 0 2285 2085 2363 5551 4656 4656 1 98500 0 DGLVSLLTTSEGADEPQR MALELMTVLVGSPRKDGLVSLLTTSEGADE VSLLTTSEGADEPQRLQFPLPTAQRSLEPG K D G Q R L 1 1 0 2 0 1 2 2 0 0 3 0 0 0 1 2 2 0 0 1 0 0 18 0 1886.9222 P51570 P51570 70 87 GALK1 Galactokinase yes yes 2 0.00021555 220.32 By MS/MS 7 0 1 1 277430 277430 0 2286 997 2364 5552 4657 4657 1 4355.2 0 DGNDLHMTYK IVLLLQEKEHEVFQRDGNDLHMTYKIGLVE EVFQRDGNDLHMTYKIGLVEALCGFQFTFK R D G Y K I 0 0 1 2 0 0 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 0 10 0 1192.5183 O60884 O60884 263 272 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.0003562 136.52 By MS/MS 7 0 1 1 693750 693750 0 2287 285 2365 5553 4658 4658 1 10891 0 DGNVLLHEMQIQHPTASLIAK MKMLVSGAGDIKLTKDGNVLLHEMQIQHPT HEMQIQHPTASLIAKVATAQDDITGDGTTS K D G A K V 2 0 1 1 0 2 1 1 2 2 3 1 1 0 1 1 1 0 0 1 0 0 21 0 2314.2104 P40227 P40227 59 79 CCT6A T-complex protein 1 subunit zeta yes yes 3;4 1.5536E-05 154.75 By MS/MS 6.14 0.639 1 4 2 7 56015000 56015000 0 2288 858 2366;2367 5554;5555;5556;5557;5558;5559;5560 4659;4660;4661;4662;4663;4664 4660 440 6 400480 0 DGPASEAALQLLCR RRLLALEEAAAAPARDGPASEAALQLLCRA RDGPASEAALQLLCRADAGPLCAACRMAAG R D G C R A 3 1 0 1 1 1 1 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 14 0 1499.7402 Q5TA31 Q5TA31 85 98 RNF187 E3 ubiquitin-protein ligase RNF187 yes yes 2 0.00046094 149.94 By MS/MS 8 0 1 1 157760 157760 0 2289 1639 2368 5561 4665 4665 1 1991.7 0 DGPGFYTTR VAVGLKQGKVIIVVKDGPGFYTTRCLAPMM VIIVVKDGPGFYTTRCLAPMMSEVIRILQE K D G T R C 0 1 0 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 1 0 0 0 9 0 1012.4614 P40939 P40939 541 549 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00038098 150.36 By MS/MS 5.33 0.471 2 1 3 7051500 7051500 0 2290 865 2369 5562;5563;5564 4666;4667 4666 2 67261 0 DGPLLAALK DLPVEGGKGGEFAWRDGPLLAALKAGHWVV GEFAWRDGPLLAALKAGHWVVLDELNLASQ R D G L K A 2 0 0 1 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 9 0 896.53312 Q9NU22 Q9NU22 1807 1815 MDN1 Midasin yes yes 2 0.0093421 101.6 By MS/MS 1.5 0.5 1 1 2 290800 290800 0 2291 2580 2370 5565;5566 4668;4669 4669 2 85352 0 DGPNALTPPPTTPEWIK SRGLTSARAAEILARDGPNALTPPPTTPEW PNALTPPPTTPEWIKFCRQLFGGFSMLLWI R D G I K F 1 0 1 1 0 0 1 1 0 1 1 1 0 0 5 0 3 1 0 0 0 0 17 0 1832.9309 P05023 P05023 75 91 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 8.8793E-05 190.34 By MS/MS 3.17 1.34 1 1 1 2 1 6 4880600 4880600 0 2292 481 2371 5567;5568;5569;5570;5571;5572 4670;4671;4672;4673 4672 4 518810 0 DGPSLLVVEQVR SGQLPDPTTNPSAGKDGPSLLVVEQVRVVD AGKDGPSLLVVEQVRVVDLEGSLKVVYPSK K D G V R V 0 1 0 1 0 1 1 1 0 0 2 0 0 0 1 1 0 0 0 3 0 0 12 0 1310.7194 Q8N1G4 Q8N1G4 543 554 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 3.3686E-05 172.56 By MS/MS 5 0 1 1 2064000 2064000 0 2293 1906 2372 5573 4674 4674 1 20701 0 DGPVGFADFVYK CFIILSKLVELWGGKDGPVGFADFVYKHIV GGKDGPVGFADFVYKHIVPACFLAPLKQTF K D G Y K H 1 0 0 2 0 0 0 2 0 0 0 1 0 2 1 0 0 0 1 2 0 0 12 0 1313.6292 O43592 O43592 860 871 XPOT Exportin-T yes yes 2 4.628E-06 188.87 By MS/MS 4 0 1 1 315220 315220 0 2294 220 2373 5574 4675 4675 1 29664 0 DGPVRPQNAEEEKR TRGVQKRRGGSTVPKDGPVRPQNAEEEKRG KDGPVRPQNAEEEKRGLDLRVSGYLNLAAD K D G K R G 1 2 1 1 0 1 3 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 14 2 1623.7965 Q92504 Q92504 298 311 SLC39A7 Zinc transporter SLC39A7 yes yes 3 1.468E-07 217.2 By MS/MS 7 0 1 1 4971700 4971700 0 2295 2048 2374 5575 4676 4676 1 78047 0 DGQAMLWDLNEGK VTVSPDGSLCASGGKDGQAMLWDLNEGKHL GKDGQAMLWDLNEGKHLYTLDGGDIINALC K D G G K H 1 0 1 2 0 1 1 2 0 0 2 1 1 0 0 0 0 1 0 0 0 0 13 0 1475.6715 P63244 P63244 213 225 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 1.8372E-11 232.17 By MS/MS 8 0 2 2 2519100 2519100 0 2296 1202 2375;2376 5576;5577 4677;4678 4677 700 2 31804 0 DGQILVYCLNR ALFATEDSHLSTVRRDGQILVYCLNRMSMK TVRRDGQILVYCLNRMSMKTSSWTRSQPFT R D G N R M 0 1 1 1 1 1 0 1 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1349.6762 Q9NU22 Q9NU22 2457 2467 MDN1 Midasin yes yes 2 2.4145E-11 205.83 By MS/MS 1.5 0.5 1 1 2 179390 179390 0 2297 2580 2377 5578;5579 4679;4680 4679 2 60678 0 DGQQIPVFK PFQRWHLDEVFLELKDGQQIPVFKLSGENG VFLELKDGQQIPVFKLSGENGDEVKKE___ K D G F K L 0 0 0 1 0 2 0 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 9 0 1030.5447 Q9GZY4 Q9GZY4 126 134 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 2 0.019965 88.948 By MS/MS 10 0 1 1 300200 300200 0 2298 2399 2378 5580 4681 4681 1 16180 0 DGSASEVPSELSERPK LYYSRTMAKSSVDQKDGSASEVPSELSERP GSASEVPSELSERPKGFYVETVVTYKEDFV K D G P K G 1 1 0 1 0 0 3 1 0 0 1 1 0 0 2 4 0 0 0 1 0 0 16 1 1686.8061 A0A096LP01 A0A096LP01 44 59 LINC00493 yes yes 2 0.0019318 150.14 By MS/MS 10 0 1 1 317520 317520 0 2299 2 2379 5581 4682 4682 1 17113 0 DGSAVEIVGLSK ESDRARNRGIPATPRDGSAVEIVGLSKSAV TPRDGSAVEIVGLSKSAVRWLLELSKKNIF R D G S K S 1 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1173.6241 P35573 P35573 1280 1291 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 6.152E-05 163.84 By MS/MS 3 0 1 1 589800 589800 0 2300 823 2380 5582 4683 4683 1 10792 0 DGSLASNPYSGDLTK YSIPFPTPTTPLTGRDGSLASNPYSGDLTK DGSLASNPYSGDLTKFGRGDASSPAPATTL R D G T K F 1 0 1 2 0 0 0 2 0 0 2 1 0 0 1 3 1 0 1 0 0 0 15 0 1523.7104 Q14157 Q14157 850 864 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 5.0945E-11 273.15 By MS/MS 3 0 2 2 2506600 2506600 0 2301 1424 2381 5583;5584 4684;4685 4684 2 45864 0 DGSTTAGNSSQVSDGAAAILLAR TTMEGLAKLKPAFKKDGSTTAGNSSQVSDG SSQVSDGAAAILLARRSKAEELGLPILGVL K D G A R R 5 1 1 2 0 1 0 3 0 1 2 0 0 0 0 4 2 0 0 1 0 0 23 0 2161.0611 P09110 P09110 267 289 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 3.3785E-37 298.1 By MS/MS 7 0 1 1 757250 757250 0 2302 532 2382 5585 4686 4686 1 11887 0 DGSVAIASKPR GTLVQEGGSPIKYNKDGSVAIASKPREVRE KYNKDGSVAIASKPREVREFNGQHFILEEA K D G P R E 2 1 0 1 0 0 0 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 11 1 1099.5986 P55809 P55809 177 187 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 0.00066005 148.94 By MS/MS 6.5 0.5 1 1 2 4321000 4321000 0 2303 1063 2383 5586;5587 4687 4687 1 31884 0 DGSVLVPPALQSYLGTDR VPRLLIALLESNQQKDGSVLVPPALQSYLG VLVPPALQSYLGTDRITAPTHVPLQYIGPN K D G D R I 1 1 0 2 0 1 0 2 0 0 3 0 0 0 2 2 1 0 1 2 0 0 18 0 1886.9738 Q9NP81 Q9NP81 472 489 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 0.021674 89.301 By MS/MS 6 0 1 1 195690 195690 0 2304 2527 2384 5588 4688;4689 4689 2 1345.2 0 DGTFDPDNLEK LFSEAVAPAIEKDFKDGTFDPDNLEKYGFE KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY K D G E K Y 0 0 1 3 0 0 1 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 11 0 1249.5463 Q8IXM3 Q8IXM3 106 116 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.00039875 133.57 By MS/MS 10 0 1 1 860980 860980 0 2305 1878 2385 5589 4690 4690 1 46404 0 DGTIDFTPGSELLITK NINQGSITFAGGPGRDGTIDFTPGSELLIT GTIDFTPGSELLITKAKNGHLAVVAPRLNS R D G T K A 0 0 0 2 0 0 1 2 0 2 2 1 0 1 1 1 3 0 0 0 0 0 16 0 1705.8774 O00159 O00159 1032 1047 MYO1C Unconventional myosin-Ic yes yes 2 5.8078E-13 248.19 By MS/MS 4.33 0.471 2 1 3 3915500 3915500 0 2306 85 2386 5590;5591;5592 4691;4692 4691 2 358920 0 DGTVQLGDFGIAR ILHRDIKSQNIFLTKDGTVQLGDFGIARVL TKDGTVQLGDFGIARVLNSTVELARTCIGT K D G A R V 1 1 0 2 0 1 0 3 0 1 1 0 0 1 0 0 1 0 0 1 0 0 13 0 1347.6783 Q96PY6 Q96PY6 139 151 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 6.8503E-08 217.14 By MS/MS 3 0 1 1 205490 205490 0 2307 2211 2387 5593 4693 4693 1 3759.9 0 DGVIEASINHEK DSPEDAEFIVAKAIRDGVIEASINHEKGYV AIRDGVIEASINHEKGYVQSKEMIDIYSTR R D G E K G 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 12 0 1310.6466 O43242 O43242 444 455 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00033187 141.89 By MS/MS 5.5 0.5 1 1 2 2254000 2254000 0 2308 198 2388 5594;5595 4694 4694 1 16103 0 DGVLTLANNVTPAK EDQVPALKTEAPLAKDGVLTLANNVTPAKD KDGVLTLANNVTPAKDVPPLSETEATPVPI K D G A K D 2 0 2 1 0 0 0 1 0 0 2 1 0 0 1 0 2 0 0 2 0 0 14 0 1411.7671 P27816 P27816 561 574 MAP4 Microtubule-associated protein 4 yes yes 2 6.181E-05 184.03 By MS/MS 2.5 0.5 1 1 2 302480 302480 0 2309 746 2389 5596;5597 4695 4695 1 75421 0 DGVNKDYEETELISTTANYR RELAEKYRDRAKERRDGVNKDYEETELIST DYEETELISTTANYRAVGPTAEADKSAAEK R D G Y R A 1 1 2 2 0 0 3 1 0 1 1 1 0 0 0 1 3 0 2 1 0 0 20 1 2317.071 Q13123 Q13123 108 127 IK Protein Red yes yes 3 0.0099064 73.928 By MS/MS 5 0 1 1 555720 555720 0 2310 1354 2390 5598 4696 4696 1 5573.6 0 DGVREVFEMATR RIGAFGYMECSAKTKDGVREVFEMATRAAL KTKDGVREVFEMATRAALQARRGKKKSGCL K D G T R A 1 2 0 1 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 2 0 0 12 1 1408.6769 P61586 P61586 165 176 RHOA Transforming protein RhoA yes yes 2 0.0065048 119.27 By MS/MS 9 0 1 1 341670 341670 0 2311 1125 2391 5599 4697 4697 1 6724.1 0 DGVTVAK TVIIEQSWGSPKVTKDGVTVAKSIDLKDKY WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL K D G A K S 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 2 0 0 7 0 688.37555 P10809 P10809 76 82 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.016725 117.93 By MS/MS 6.5 0.5 1 1 2 3425200 3425200 0 2312 569 2392 5600;5601 4698 4698 1 27229 0 DGVWNLQNEVTK ILPKCRTSYEEFTHKDGVWNLQNEVTKERT THKDGVWNLQNEVTKERTAQCFLRVDDESM K D G T K E 0 0 2 1 0 1 1 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 12 0 1401.6888 Q6P2Q9 Q6P2Q9 1211 1222 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 2.3107E-06 196.16 By MS/MS 2 0 1 1 212490 212490 0 2313 1708 2393 5602 4699 4699 1 71874 0 DGVYVLDLAAK LYFTYLEINPLVVTKDGVYVLDLAAKVDAT VVTKDGVYVLDLAAKVDATADYICKVKWGD K D G A K V 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 0 0 0 1 2 0 0 11 0 1162.6234 P53396 P53396 210 220 ACLY ATP-citrate synthase yes yes 2 0.00015257 154.01 By MS/MS 4.3 2.1 1 1 2 2 1 1 1 1 10 19102000 19102000 0 2314 1030 2394 5603;5604;5605;5606;5607;5608;5609;5610;5611;5612 4700;4701;4702;4703 4701 4 1644800 0 DHAISLSEPR PNSSESFEHIARSARDHAISLSEPRMLWGS ARSARDHAISLSEPRMLWGSDPYPHAEPQQ R D H P R M 1 1 0 1 0 0 1 0 1 1 1 0 0 0 1 2 0 0 0 0 0 0 10 0 1123.5622 Q9Y520 Q9Y520 795 804 PRRC2C Protein PRRC2C yes yes 2 6.4448E-05 156.35 By MS/MS 2 0.816 1 1 1 3 2071700 2071700 0 2315 2905 2395 5613;5614;5615 4704;4705;4706 4704 3 513710 0 DHASIQMNVAEVDK VPRKCSASNRIIGAKDHASIQMNVAEVDKV KDHASIQMNVAEVDKVTGRFNGQFKTYAIC K D H D K V 2 0 1 2 0 1 1 0 1 1 0 1 1 0 0 1 0 0 0 2 0 0 14 0 1555.7301 P63220 P63220 28 41 RPS21 40S ribosomal protein S21 yes yes 2 4.1764E-07 204.85 By MS/MS 10 0 2 2 1664700 1664700 0 2316 1200 2396;2397 5616;5617 4707;4708 4708 695 2 89723 0 DHASIQMNVAEVDKVTGR VPRKCSASNRIIGAKDHASIQMNVAEVDKV SIQMNVAEVDKVTGRFNGQFKTYAICGAIR K D H G R F 2 1 1 2 0 1 1 1 1 1 0 1 1 0 0 1 1 0 0 3 0 0 18 1 1968.9687 P63220 P63220 28 45 RPS21 40S ribosomal protein S21 yes yes 3 4.1995E-05 188.16 By MS/MS 10 0 2 2 6547900 6547900 0 2317 1200 2398;2399 5618;5619 4709;4710 4710 695 2 352910 0 DHAVVVGVYRPPPK NMKPQEQLTLEPYERDHAVVVGVYRPPPKV RDHAVVVGVYRPPPKVKN____________ R D H P K V 1 1 0 1 0 0 0 1 1 0 0 1 0 0 3 0 0 0 1 4 0 0 14 1 1532.8463 P22087 P22087 305 318 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3 0.00029705 134.75 By MS/MS 7 0 1 1 615920 615920 0 2318 687 2400 5620 4711 4711 1 9668.8 0 DHCVAHK EEDCTEELFDFLHARDHCVAHKLFNNLK__ LFDFLHARDHCVAHKLFNNLK_________ R D H H K L 1 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 7 0 865.38647 P07919;A0A096LP55 P07919 79 85 UQCRH;UQCRHL Cytochrome b-c1 complex subunit 6, mitochondrial;Cytochrome b-c1 complex subunit 6 yes no 2 0.034507 101.33 By MS/MS 10 0 1 1 62358 62358 0 2319 515 2401 5621 4712 4712 1 3360.8 0 DHEDYDPQTVR ENLATYMESMRLYARDHEDYDPQTVRLGSR LYARDHEDYDPQTVRLGSRYSHVQEVQERL R D H V R L 0 1 0 3 0 1 1 0 1 0 0 0 0 0 1 0 1 0 1 1 0 0 11 0 1373.5848 Q93008 Q93008 633 643 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 8.6106E-05 153.1 By MS/MS 3 1.41 1 1 1 1 1 5 2212500 2212500 0 2320 2085 2402 5622;5623;5624;5625;5626 4713 4713 1 508450 0 DHFEEAMR AMEVEEDDPVPEIRRDHFEEAMRFARRSVS PVPEIRRDHFEEAMRFARRSVSDNDIRKYE R D H M R F 1 1 0 1 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 8 0 1033.4287 P55072 P55072 734 741 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.023093 95.352 By MS/MS 4 0 1 1 788160 788160 0 2321 1054 2403 5627 4714 4714 587 1 74171 0 DHFTEILNGASR IMKADMLKVVDEKYKDHFTEILNGASRRLE KYKDHFTEILNGASRRLELVFGLDLKEDNP K D H S R R 1 1 1 1 0 0 1 1 1 1 1 0 0 1 0 1 1 0 0 0 0 0 12 0 1358.6579 P43366 P43366 144 155 MAGEB1 Melanoma-associated antigen B1 yes yes 2 0.030573 81.95 By MS/MS 5 0 1 1 199020 199020 0 2322 897 2404 5628 4715 4715 0 1996.1 0 DHGLLIYHIPQVEPR VKQHKRLTQAIQKARDHGLLIYHIPQVEPR DHGLLIYHIPQVEPRDLDFSTSHGAVSATP R D H P R D 0 1 0 1 0 1 1 1 2 2 2 0 0 0 2 0 0 0 1 1 0 0 15 0 1785.9526 Q9Y676 Q9Y676 159 173 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 0.00031355 137.81 By MS/MS 8 0 1 1 1848900 1848900 0 2323 2932 2405 5629 4716 4716 1 23342 0 DHLGEGLADSR KEHEQNMQLLLQQSRDHLGEGLADSRRQYE QQSRDHLGEGLADSRRQYEARIQALEKELG R D H S R R 1 1 0 2 0 0 1 2 1 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1168.5473 Q2M1P5 Q2M1P5 1173 1183 KIF7 Kinesin-like protein KIF7 yes yes 2 0.0041362 106.2 By MS/MS 3 0 1 1 147970 147970 0 2324 1566 2406 5630 4717 4717 1 2707.4 0 DHLRGEHSK MKLLQKKQSQLVQEKDHLRGEHSKAVLARS QLVQEKDHLRGEHSKAVLARSKLESLCREL K D H S K A 0 1 0 1 0 0 1 1 2 0 1 1 0 0 0 1 0 0 0 0 0 0 9 1 1077.5316 P40222 P40222 225 233 TXLNA Alpha-taxilin yes yes 2;3 0.0017089 151.44 By MS/MS 5.33 0.471 2 1 3 195790 195790 0 2325 857 2407 5631;5632;5633 4718;4719 4718 2 1934.4 0 DHLYGTLDPNTR VEGVAHIIDPKAISKDHLYGTLDPNTREWT ISKDHLYGTLDPNTREWTDGLFTHVLRKII K D H T R E 0 1 1 2 0 0 0 1 1 0 2 0 0 0 1 0 2 0 1 0 0 0 12 0 1400.6684 Q14204 Q14204 2262 2273 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 8.4103E-05 171.85 By MS/MS 1.5 0.5 1 1 2 534120 534120 0 2326 1433 2408 5634;5635 4720 4720 1 148660 0 DHNVEFR IIKEVLLEAQDMAVRDHNVEFRSNLYIAES EAQDMAVRDHNVEFRSNLYIAESTSGRGQC R D H F R S 0 1 1 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 7 0 915.41988 Q9NWU5 Q9NWU5 125 131 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.049893 84.916 By MS/MS By matching 9 0 2 1 1 3606000 3578400 27620 2327 2614 2409 5636;5637 4721 4721 1 70423 62983 DHPALNYNIVSGPPSHK IEEWQPEPLVPPVPKDHPALNYNIVSGPPS PALNYNIVSGPPSHKTVVNGKECINFASFN K D H H K T 1 0 2 1 0 0 0 1 2 1 1 1 0 0 3 2 0 0 1 1 0 0 17 0 1844.9169 O15269 O15269 76 92 SPTLC1 Serine palmitoyltransferase 1 yes yes 3 0.00086826 149.59 By MS/MS 6 0 1 1 11414000 11414000 0 2328 177 2410 5638 4722 4722 1 78465 0 DHPFGFVAVPTK IALSRLAQERKAWRKDHPFGFVAVPTKNPD WRKDHPFGFVAVPTKNPDGTMNLMNWECAI K D H T K N 1 0 0 1 0 0 0 1 1 0 0 1 0 2 2 0 1 0 0 2 0 0 12 0 1313.6768 P63279 P63279 19 30 UBE2I SUMO-conjugating enzyme UBC9 yes yes 2 0.0015085 115.7 By MS/MS 10 0 1 1 343590 343590 0 2329 1205 2411 5639 4723 4723 1 18518 0 DHPLPEVAHVK VKSEDFSLPAYMDRRDHPLPEVAHVKHLSA MDRRDHPLPEVAHVKHLSASQKALKEKEKA R D H V K H 1 0 0 1 0 0 1 0 2 0 1 1 0 0 2 0 0 0 0 2 0 0 11 0 1240.6564 P13073 P13073 43 53 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2;3 0.00049911 129.88 By MS/MS 10 0 2 2 6931800 6931800 0 2330 598 2412 5640;5641 4724;4725 4725 2 373600 0 DHQYQFLEDAVR CDTLTCRDCQLNAHKDHQYQFLEDAVRNQR AHKDHQYQFLEDAVRNQRKLLASLVKRLGD K D H V R N 1 1 0 2 0 2 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 12 0 1519.7056 Q13263 Q13263 239 250 TRIM28 Transcription intermediary factor 1-beta yes yes 2 1.1518E-06 199.8 By MS/MS 4.5 0.5 1 1 2 2096900 2096900 0 2331 1367 2413 5642;5643 4726;4727 4726 1 153700 0 DHRPPCAQEAPR DIFRIYIKEKKECRRDHRPPCAQEAPRNMV CRRDHRPPCAQEAPRNMVHPNVICDGCNGP R D H P R N 2 2 0 1 1 1 1 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 12 1 1432.663 Q13501 Q13501 108 119 SQSTM1 Sequestosome-1 yes yes 3 0.0025497 114.24 By MS/MS By matching 6 0 2 1 1 1070800 1056800 14041 2332 1391 2414 5644;5645 4728 4728 1 7264.6 14388 DHTFLYEK MVSIIAMGNTLQSFRDHTFLYEKLYTGKPN NTLQSFRDHTFLYEKLYTGKPNLVNGLQAR R D H E K L 0 0 0 1 0 0 1 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 1051.4975 Q9UKR5 Q9UKR5 29 36 C14orf1 Probable ergosterol biosynthetic protein 28 yes yes 2 0.0049312 125.81 By MS/MS 10 0 1 1 529680 529680 0 2333 2763 2415 5646 4729 4729 1 28548 0 DHTNAQFK CIHPDGVIPVLTFLRDHTNAQFKSLVDLTA PVLTFLRDHTNAQFKSLVDLTAVDVPTRQN R D H F K S 1 0 1 1 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 959.44609 O75489 O75489 102 109 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.00022346 169.37 By MS/MS 8 0 1 1 2232300 2232300 0 2334 330 2416 5647 4730 4730 1 28182 0 DHVVSDFSEHGSLK GLEGLLTTKWLLRGKDHVVSDFSEHGSLKY KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ K D H L K Y 0 0 0 2 0 0 1 1 2 0 1 1 0 1 0 3 0 0 0 2 0 0 14 0 1555.7267 P54886 P54886 768 781 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.019064 133.15 By MS/MS 5 0 1 1 1112800 1112800 0 2335 1048 2417 5648 4731 4731 1 11161 0 DIAAHIKK VECATQALEKYNIEKDIAAHIKKEFDKKYN EKYNIEKDIAAHIKKEFDKKYNPTWHCIVG K D I K K E 2 0 0 1 0 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 0 8 1 894.5287 P63167 P63167 37 44 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 2 0.042406 108.09 By MS/MS 10 0 1 1 1009600 1009600 0 2336 1196 2418 5649 4732 4732 1 54412 0 DIALSLPQLPR TLDTCLKLDDTVYLRDIALSLPQLPRELPS VYLRDIALSLPQLPRELPSSHTNAKVAEVL R D I P R E 1 1 0 1 0 1 0 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1221.7081 Q9NYY8 Q9NYY8 557 567 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.0012255 114.4 By MS/MS 6 0 1 1 844520 844520 0 2337 2640 2419 5650 4733 4733 1 5805.4 0 DIATIVADK VSDKERHTQLEQMFRDIATIVADKCVNPET LEQMFRDIATIVADKCVNPETKRPYTVILI R D I D K C 2 0 0 2 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 9 0 944.51786 Q9Y3A5 Q9Y3A5 110 118 SBDS Ribosome maturation protein SBDS yes yes 2 0.0090765 102.07 By MS/MS 8 0 1 1 1124300 1124300 0 2338 2862 2420 5651 4734 4734 1 14194 0 DIDAFWLQR SGELMSSKKKDLHPRDIDAFWLQRQLSRFY KDLHPRDIDAFWLQRQLSRFYDDAIVSQKK R D I Q R Q 1 1 0 2 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 9 0 1162.5771 O75643 O75643 262 270 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00012984 158.07 By MS/MS 3.33 2.62 1 1 1 3 140980 140980 0 2339 340 2421 5652;5653;5654 4735;4736;4737 4737 3 25040 0 DIDENAYAK CDLLMEIEQVDMLEKDIDENAYAKVCLYLT VDMLEKDIDENAYAKVCLYLTSCVNYVPEP K D I A K V 2 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1037.4666 Q13200 Q13200 220 228 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0013614 129.42 By MS/MS 4 0 1 1 651890 651890 0 2340 1365 2422 5655 4738 4738 1 61347 0 DIDEVSSLLR EILPNLVCCSAKNLRDIDEVSSLLRTSIMS AKNLRDIDEVSSLLRTSIMSKQYGNEVFLA R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 P50990 P50990 156 165 CCT8 T-complex protein 1 subunit theta yes yes 2 1.7935E-07 183.65 By MS/MS By MS/MS 6 2.56 1 1 1 4 1 1 1 1 10 1 67244000 67089000 154930 2341 984 2423 5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666 4739;4740;4741;4742;4743;4744;4745;4746;4747;4748;4749 4748 11 638310 158760 DIDIHEVR MKVTEKIPVRHLYTKDIDIHEVRIGWSLTT VRHLYTKDIDIHEVRIGWSLTTSGMLLGEE K D I V R I 0 1 0 2 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 995.50361 Q00839 Q00839 353 360 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.012776 107.66 By MS/MS 4 0.816 1 1 1 3 3420100 3420100 0 2342 1264 2424 5667;5668;5669 4750;4751;4752 4750 3 232360 0 DIDILIVR VIHCKSLPGVVTRHKDIDILIVRENTEGEY GVVTRHKDIDILIVRENTEGEYSSLEHESV K D I V R E 0 1 0 2 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 1 0 0 8 0 955.57023 P51553 P51553 160 167 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 0.03867 86.794 By MS/MS 7 0 1 1 93222 93222 0 2343 996 2425 5670 4753 4753 1 1463.4 0 DIDPQNDLTFLR SLMHSFILKARSTVRDIDPQNDLTFLRIRS TVRDIDPQNDLTFLRIRSKKNEIMVAPDKD R D I L R I 0 1 1 3 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 0 0 12 0 1445.7151 Q9NP97;Q8TF09 Q9NP97 59 70 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 2 4.5347E-06 189.17 By MS/MS 10 0 1 1 610950 610950 0 2344 2007 2426 5671 4754 4754 1 32928 0 DIDSFVPSK TQVKGTGPDGRITKKDIDSFVPSKVAPAPA GRITKKDIDSFVPSKVAPAPAAVVPPTGPG K D I S K V 0 0 0 2 0 0 0 0 0 1 0 1 0 1 1 2 0 0 0 1 0 0 9 0 1006.4971 P10515 P10515 388 396 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.029975 92.051 By MS/MS By MS/MS 5 0 2 1 1 4332800 4025200 307600 2345 561 2427 5672;5673 4755;4756 4756 2 40371 258320 DIEAMDPSILK LVFSFNEKLFGLLVKDIEAMDPSILKGEPA LLVKDIEAMDPSILKGEPATGKRQKIEVGL K D I L K G 1 0 0 2 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 11 0 1230.6166 P46459 P46459 151 161 NSF Vesicle-fusing ATPase yes yes 2 0.00011847 150.27 By MS/MS 5 0 1 1 903640 903640 0 2346 912 2428 5674 4757 4757 1 9063 0 DIEEHLQR REPCITPSGITYDRKDIEEHLQRVGHFDPV GITYDRKDIEEHLQRVGHFDPVTRSPLTQE K D I Q R V 0 1 0 1 0 1 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1038.5094 Q9UNE7 Q9UNE7 256 263 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.012059 108.46 By MS/MS 7.5 0.5 1 1 2 1705400 1705400 0 2347 2786 2429 5675;5676 4758 4758 1 22326 0 DIEEIIDELK MVQINDNYYEDLTAKDIEEIIDELKAGKIP DLTAKDIEEIIDELKAGKIPKPGPRSGRFS K D I L K A 0 0 0 2 0 0 3 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1215.6234 P19404 P19404 200 209 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 2 0.0012002 119.75 By MS/MS 8 0 1 1 53915 53915 0 2348 662 2430 5677 4759 4759 1 680.67 0 DIELSPEAQAK VDKIRTIAQAVYGAKDIELSPEAQAKIDRY YGAKDIELSPEAQAKIDRYTQQGFGNLPIC K D I A K I 2 0 0 1 0 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1199.6034 Q6UB35 Q6UB35 881 891 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.016835 87.298 By MS/MS 4 0 1 1 8776400 8776400 0 2349 1728 2431 5678 4760 4760 1 825920 0 DIENQYETQITQIEHEVSSSGQEVQSSAK DMRQEYEQLIAKNRKDIENQYETQITQIEH HEVSSSGQEVQSSAKEVTQLRHGVQELEIE K D I A K E 1 0 1 1 0 5 5 1 1 3 0 1 0 0 0 5 2 0 1 2 0 0 29 0 3263.5066 P35527;CON__P35527 P35527 340 368 KRT9 Keratin, type I cytoskeletal 9 yes no 3 6.5789E-13 163.61 By MS/MS By matching 5 0.707 1 2 1 2 2 941810 818740 123080 + 2350 822 2432 5679;5680;5681;5682 4761 4761 1 6132.7 211650 DIEREDIEFICK LALHFLNKMKIMVIKDIEREDIEFICKTIG VIKDIEREDIEFICKTIGTKPVAHIDQFTA K D I C K T 0 1 0 2 1 0 3 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 12 1 1565.7396 P50991 P50991 327 338 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0050913 126.83 By MS/MS 6 1.29 1 1 2 1 1 6 33138000 33138000 0 2351 985 2433 5683;5684;5685;5686;5687;5688 4762;4763;4764;4765 4762 4 270350 0 DIFLASASCDGSVR RGHDAPVLSLSFDPKDIFLASASCDGSVRV KDIFLASASCDGSVRVWQISDQTCAISWPL K D I V R V 2 1 0 2 1 0 0 1 0 1 1 0 0 1 0 3 0 0 0 1 0 0 14 0 1496.6929 O75717 O75717 148 161 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 1.105E-07 220.29 By MS/MS By matching 3.33 0.471 2 1 2 1 946510 838100 108410 2352 342 2434 5689;5690;5691 4766 4766 1 59292 13799 DIGFIKLD YGLNMCRQCFRQYAKDIGFIKLD_______ CFRQYAKDIGFIKLD_______________ K D I L D - 0 0 0 2 0 0 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 1 919.50148 P62273 P62273 49 56 RPS29 40S ribosomal protein S29 yes yes 2 0.04407 111.95 By MS/MS 10 0 1 1 16667000 16667000 0 2353 1150 2435 5692 4767 4767 1 898310 0 DIGTNLPTLLWK CEIWLTSEDTGAYGRDIGTNLPTLLWKLVE YGRDIGTNLPTLLWKLVEVIPEGAMLRLGM R D I W K L 0 0 1 1 0 0 0 1 0 1 3 1 0 0 1 0 2 1 0 0 0 0 12 0 1369.7606 Q5VV42 Q5VV42 266 277 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 6.7933E-09 218.6 By MS/MS 6 0 1 1 509350 509350 0 2354 1652 2436 5693 4768 4768 1 3501.4 0 DIIALNPLYR EEVKALTAEIVKTIRDIIALNPLYRESVLQ VKTIRDIIALNPLYRESVLQMMQAGQRVVD R D I Y R E 1 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 0 10 0 1186.671 P36776 P36776 302 311 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.0056155 104.2 By MS/MS 4 0 1 1 399920 399920 0 2355 839 2437 5694 4769 4769 1 37635 0 DIICQIAYAR YNTPKYRMIVRVTNRDIICQIAYARIEGDM RVTNRDIICQIAYARIEGDMIVCAAYAHEL R D I A R I 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1221.6176 P46777 P46777 59 68 RPL5 60S ribosomal protein L5 yes yes 2 0.00029385 140.75 By MS/MS 7.5 0.5 1 1 2 3941400 3941400 0 2356 915 2438 5695;5696 4770 4770 1 58668 0 DIIEQPVLVQGNSNR TVVFERMVAEDERHRDIIEQPVLVQGNSNR DIIEQPVLVQGNSNRRSVSTLKPCAKDAYM R D I N R R 0 1 2 1 0 2 1 1 0 2 1 0 0 0 1 1 0 0 0 2 0 0 15 0 1680.8795 Q7Z3U7 Q7Z3U7 189 203 MON2 Protein MON2 homolog yes yes 2 3.0915E-05 196.84 By MS/MS 2 0 1 1 331250 331250 0 2357 1787 2439 5697 4771 4771 1 112040 0 DIIFAIK PYAKILEDNSIPQVKDIIFAIKKTLNI___ DNSIPQVKDIIFAIKKTLNI__________ K D I I K K 1 0 0 1 0 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 7 0 818.49019 P11177 P11177 348 354 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.040164 97.071 By MS/MS 7.5 0.5 1 1 2 1281600 1281600 0 2358 575 2440 5698;5699 4772 4772 1 19181 0 DIIGVAETGSGK TPIQRQAIPIGLQNRDIIGVAETGSGKTAA QNRDIIGVAETGSGKTAAFLIPLLVWITTL R D I G K T 1 0 0 1 0 0 1 3 0 2 0 1 0 0 0 1 1 0 0 1 0 0 12 0 1145.5928 Q9BUQ8 Q9BUQ8 430 441 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.000344 141.1 By MS/MS 4.5 0.5 1 1 2 1817300 1817300 0 2359 2326 2441 5700;5701 4773 4773 1 138360 0 DIINEEEVQFLK GDAFPELKKDPDMVKDIINEEEVQFLKTLS MVKDIINEEEVQFLKTLSRGRRILDRKIQS K D I L K T 0 0 1 1 0 1 3 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1475.7508 P49588 P49588 373 384 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 7.4868E-05 178.53 By MS/MS 4.5 0.5 1 1 2 1361300 1361300 0 2360 951 2442 5702;5703 4774 4774 1 92910 0 DIISELLTSDDMK MNYFPLAPFNQLLQKDIISELLTSDDMKNA QKDIISELLTSDDMKNAYKLHTLDTCLKLD K D I M K N 0 0 0 3 0 0 1 0 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 1478.7174 Q9NYY8 Q9NYY8 523 535 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 6.3139E-17 253.71 By MS/MS 6 0 2 2 458760 458760 0 2361 2640 2443;2444 5704;5705 4775;4776;4777;4778 4777 1125 4 3153.6 0 DIISIAEDEDLR HLKKPGGFDISLFYRDIISIAEDEDLRVHF FYRDIISIAEDEDLRVHFEESSKLEDLLRK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 P12956 P12956 219 230 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 1.6766E-12 232.88 By MS/MS 5 0 1 1 1982800 1982800 0 2362 596 2445 5706 4779 4779 1 19887 0 DIKDTTVGTLSQR GAEEAEEVGVEHLLRDIKDTTVGTLSQRIT LRDIKDTTVGTLSQRITNQVHGLKGLNSKL R D I Q R I 0 1 0 2 0 1 0 1 0 1 1 1 0 0 0 1 3 0 0 1 0 0 13 1 1432.7522 P51665 P51665 178 190 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2;3 0.0008565 163.71 By MS/MS By MS/MS 7.2 0.4 4 1 3 2 27069000 26961000 107410 2363 1005 2446 5707;5708;5709;5710;5711 4780;4781;4782 4782 2 422760 193450 DIKPQNLLLDPDTAVLK FRSLAYIHSFGICHRDIKPQNLLLDPDTAV KPQNLLLDPDTAVLKLCDFGSAKQLVRGEP R D I L K L 1 0 1 3 0 1 0 0 0 1 4 2 0 0 2 0 1 0 0 1 0 0 17 1 1892.0619 P49841 P49841 181 197 GSK3B Glycogen synthase kinase-3 beta yes yes 3 0.0025709 103.01 By MS/MS 7 0 1 1 111360 111360 0 2364 967 2447 5712 4783 4783 1 1748.2 0 DIKWDFTPCK SIYIPRGVNVSALSRDIKWDFTPCKNLRVG SALSRDIKWDFTPCKNLRVGSHITGGDIYG R D I C K N 0 0 0 2 1 0 0 0 0 1 0 2 0 1 1 0 1 1 0 0 0 0 10 1 1308.6173 P38606 P38606 130 139 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 0.0014986 140.11 By MS/MS 5 0 1 1 711640 711640 0 2365 849 2448 5713 4784 4784 1 7137.4 0 DILETHLR VCVNLMKALKMSPYKDILETHLREKITAQS LKMSPYKDILETHLREKITAQSIEELCAVN K D I L R E 0 1 0 1 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 995.53999 P78527 P78527 1413 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.015404 104.75 By MS/MS 1.5 0.5 1 1 2 875730 875730 0 2366 1225 2449 5714;5715 4785;4786 4786 2 268250 0 DILIQYDR YYQKYVDEASKKEIKDILIQYDRTLLVADP ASKKEIKDILIQYDRTLLVADPRRCESKKF K D I D R T 0 1 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1034.5397 P62249 P62249 110 117 RPS16 40S ribosomal protein S16 yes yes 2 0.0061199 120.87 By MS/MS By matching 9.67 0.471 1 2 2 1 30835000 30703000 132200 2367 1145 2450 5716;5717;5718 4787;4788;4789 4788 3 1633500 169250 DILKESNIQFN VEHIEWFRNYFNEKKDILKESNIQFN____ NEKKDILKESNIQFN_______________ K D I F N - 0 0 2 1 0 1 1 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 11 1 1319.6721 Q92665 Q92665 385 395 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0019261 133.75 By MS/MS 7 0 1 1 1467700 1467700 0 2368 2067 2451 5719 4790 4790 1 23040 0 DILLCTDIASR LMRVGIFQSFQKSSRDILLCTDIASRGLDS KSSRDILLCTDIASRGLDSTGVELVVNYDF R D I S R G 1 1 0 2 1 0 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1275.6493 Q9NUL7 Q9NUL7 449 459 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 2.5436E-05 158.79 By MS/MS 6 0 1 1 3815700 3815700 0 2369 2582 2452 5720 4791 4791 1 26230 0 DILLQQQQQLGHGGPEAAPR AAASAAAKPPPLSAKDILLQQQQQLGHGGP QQQQLGHGGPEAAPRAPQALERYPLAAAAE K D I P R A 2 1 0 1 0 5 1 3 1 1 3 0 0 0 2 0 0 0 0 0 0 0 20 0 2155.1134 Q7Z5L9 Q7Z5L9 90 109 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.013458 73.809 By MS/MS 5 0 1 1 1695900 1695900 0 2370 1799 2453 5721 4792 4792 1 17009 0 DILTAIAADLCK QQLEALRRMVQEREKDILTAIAADLCKSEF REKDILTAIAADLCKSEFNVYSQEVITVLG K D I C K S 3 0 0 2 1 0 0 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1302.6853 P51648 P51648 40 51 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 0.00017095 160.77 By MS/MS 6 0 1 1 445770 445770 0 2371 1002 2454 5722 4793;4794 4794 2 3064.3 0 DILVLPLDLTDTGSHEAATK RVKRRCLENGNLKEKDILVLPLDLTDTGSH PLDLTDTGSHEAATKAVLQEFGRIDILVNN K D I T K A 2 0 0 3 0 0 1 1 1 1 4 1 0 0 1 1 3 0 0 1 0 0 20 0 2108.1001 Q9Y394 Q9Y394 104 123 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 3 0.038479 62.765 By MS/MS 7.5 0.5 1 1 2 337840 337840 0 2372 2859 2455 5723;5724 4795 4795 1 4949.7 0 DILYVFQGIDGK DTGGTMEITEAALVRDILYVFQGIDGKNIK LVRDILYVFQGIDGKNIKMNNTENCYKVEG R D I G K N 0 0 0 2 0 1 0 2 0 2 1 1 0 1 0 0 0 0 1 1 0 0 12 0 1366.7133 Q96CW5 Q96CW5 253 264 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 5.1065E-05 167.11 By MS/MS 4.5 0.5 1 1 2 371230 371230 0 2373 2128 2456 5725;5726 4796 4796 1 31287 0 DIMLATGK GAQLCTVYYASLNFRDIMLATGKLSPDAIP YASLNFRDIMLATGKLSPDAIPGKWTSQDS R D I G K L 1 0 0 1 0 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 8 0 847.44734 P49327 P49327 1575 1582 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.035617 82.75 By MS/MS 3 0 1 1 0 0 0 2374 946 2457 5727 4797 4797 500 1 0 0 DINELNLPK GSSKKASAAQLRIQKDINELNLPKTCDISF QLRIQKDINELNLPKTCDISFSDPDDLLNF K D I P K T 0 0 2 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 9 0 1054.5659 P61081 P61081 37 45 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.0016507 126.07 By MS/MS 9.5 0.5 1 1 2 1917000 1917000 0 2375 1108 2458 5728;5729 4798;4799 4799 2 47978 0 DIPGLTDTTVPR NLSVLNLVIVKKGEKDIPGLTDTTVPRRLG GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K D I P R R 0 1 0 2 0 0 0 1 0 1 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1283.6721 P62753 P62753 120 131 RPS6 40S ribosomal protein S6 yes yes 2 0.00040744 136.96 By MS/MS By MS/MS 8.6 0.8 3 1 1 4 1 37503000 37371000 131510 2376 1169 2459 5730;5731;5732;5733;5734 4800;4801;4802;4803;4804 4802 4 481220 177470 DIPGLTDTTVPRR NLSVLNLVIVKKGEKDIPGLTDTTVPRRLG EKDIPGLTDTTVPRRLGPKRASRIRKLFNL K D I R R L 0 2 0 2 0 0 0 1 0 1 1 0 0 0 2 0 3 0 0 1 0 0 13 1 1439.7732 P62753 P62753 120 132 RPS6 40S ribosomal protein S6 yes yes 2 0.019666 101.38 By MS/MS 8 0 1 1 2853400 2853400 0 2377 1169 2460 5735 4805 4805 1 36024 0 DIPNENEAQFQIR EDGKMDRQMFLATWKDIPNENEAQFQIRDC WKDIPNENEAQFQIRDCPLNAEAASSKLQS K D I I R D 1 1 2 1 0 2 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 13 0 1572.7532 Q10567 Q10567 852 864 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.00030518 151.79 By MS/MS 4 0 1 1 1204600 1204600 0 2378 1322 2461 5736 4806 4806 1 113360 0 DIPVLVATDVAAR DQSERNKVISDFKKKDIPVLVATDVAARGL KKDIPVLVATDVAARGLDIPSIKTVINYDV K D I A R G 3 1 0 2 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 3 0 0 13 0 1338.7507 Q86XP3 Q86XP3 548 560 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.0014076 118.77 By MS/MS 4 0.816 1 1 1 3 929650 929650 0 2379 1846 2462 5737;5738;5739 4807 4807 1 45174 0 DIQEESTFSSR LLSPARLYAIAAKEKDIQEESTFSSRKISN AKEKDIQEESTFSSRKISNQFDWALMRLDL K D I S R K 0 1 0 1 0 1 2 0 0 1 0 0 0 1 0 3 1 0 0 0 0 0 11 0 1297.5786 P42704 P42704 67 77 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.1303E-06 189.17 By MS/MS By MS/MS 3.75 0.829 2 1 1 3 1 5343700 5159800 183890 2380 886 2463 5740;5741;5742;5743 4808;4809;4810 4810 3 113690 23407 DIQENDEEAVQVK DREASIDILHSIVKRDIQENDEEAVQVKEQ KRDIQENDEEAVQVKEQSILELGSLLAKTG R D I V K E 1 0 1 2 0 2 3 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 13 0 1515.7053 O00231 O00231 34 46 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 8.2462E-12 241.31 By MS/MS 7 0 1 1 4422300 4422300 0 2381 93 2464 5744 4811 4811 1 69422 0 DIQQTLTQNMER EDVVTFQTLPPQRRRDIQQTLTQNMERIFS RRRDIQQTLTQNMERIFSFLLNTLQENVNK R D I E R I 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 12 0 1475.7038 Q9HAV4 Q9HAV4 177 188 XPO5 Exportin-5 yes yes 2 1.0539E-08 241.39 By MS/MS 3 0 1 1 179200 179200 0 2382 2495 2465 5745 4812 4812 1 3278.9 0 DIQSGLSDSR QLKLYEQEQFDDWSRDIQSGLSDSRSGLCI DDWSRDIQSGLSDSRSGLCIEASSRIMELD R D I S R S 0 1 0 2 0 1 0 1 0 1 1 0 0 0 0 3 0 0 0 0 0 0 10 0 1076.5098 Q8NCM8 Q8NCM8 541 550 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0094885 95.483 By MS/MS 1 0 1 1 143840 143840 0 2383 1952 2466 5746 4813 4813 1 34661 0 DIQTLLSR SEPRVRLVMAQHMIRDIQTLLSRMETLPYL MAQHMIRDIQTLLSRMETLPYLQCRGGPQP R D I S R M 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 8 0 944.5291 P46379 P46379 175 182 BAG6 Large proline-rich protein BAG6 yes yes 2 0.0072877 114.89 By MS/MS 3 0 1 1 417160 417160 0 2384 911 2467 5747 4814 4814 1 7632.8 0 DIQTNVYIK RVAEFHTELERLPAKDIQTNVYIKHPVSLE ERLPAKDIQTNVYIKHPVSLEQYLMEGSYN K D I I K H 0 0 1 1 0 1 0 0 0 2 0 1 0 0 0 0 1 0 1 1 0 0 9 0 1092.5815 P48556 P48556 219 227 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 0.00070687 140.35 By MS/MS 8 0 1 1 1491400 1491400 0 2385 937 2468 5748 4815 4815 1 18829 0 DIREEAEKYAK WVGELTNGRHEIVPKDIREEAEKYAKESLK IVPKDIREEAEKYAKESLKEEDESDDDNM_ K D I A K E 2 1 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 11 2 1350.6779 P25788 P25788 231 241 PSMA3 Proteasome subunit alpha type-3 yes yes 3 0.0055023 100.09 By MS/MS 8 0 1 1 6069900 6069900 0 2386 726 2469 5749 4816 4816 1 76632 0 DISDIEGEKDGIRK KLSPELLNTGRFETKDISDIEGEKDGIRKA KDISDIEGEKDGIRKAREVLMRLGLDPTQE K D I R K A 0 1 0 3 0 0 2 2 0 3 0 2 0 0 0 1 0 0 0 0 0 0 14 2 1573.7948 P52789 P52789 338 351 HK2 Hexokinase-2 yes yes 3 0.040345 67.252 By MS/MS 4.5 0.5 1 1 2 1652000 1652000 0 2387 1023 2470 5750;5751 4817 4817 0 123700 0 DISEAALKER HIPCLMPEYFEPQIKDISEAALKERIELRK EPQIKDISEAALKERIELRKVKASVDMFDQ K D I E R I 2 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 10 1 1130.5932 Q96EY7 Q96EY7 151 160 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.00063147 128.6 By MS/MS 5.5 1.12 1 1 1 1 4 13663000 13663000 0 2388 2151 2471 5752;5753;5754;5755 4818;4819 4818 2 160790 0 DISEASVFDAYVLPK KKFVIRNIVEAAAVRDISEASVFDAYVLPK DISEASVFDAYVLPKLYVKLHYCVSCAIHS R D I P K L 2 0 0 2 0 0 1 0 0 1 1 1 0 1 1 2 0 0 1 2 0 0 15 0 1652.8298 P62854 P62854 52 66 RPS26 40S ribosomal protein S26 yes yes 2 1.2455E-07 221.55 By MS/MS 9.67 0.471 1 2 3 4908400 4908400 0 2389 1177 2472 5756;5757;5758 4820;4821;4822 4822 3 251270 0 DISEVIALGVPNPR AAPDKRSKLQRNENRDISEVIALGVPNPRT RDISEVIALGVPNPRTSNEVQYDQRLFNQS R D I P R T 1 1 1 1 0 0 1 1 0 2 1 0 0 0 2 1 0 0 0 2 0 0 14 0 1478.8093 Q13573 Q13573 387 400 SNW1 SNW domain-containing protein 1 yes yes 2 0.039193 72.652 By MS/MS 5 0 1 1 215090 215090 0 2390 1398 2473 5759 4823 4823 1 2157.3 0 DISLSDYK PNFKATAVMPDGQFKDISLSDYKGKYVVFF MPDGQFKDISLSDYKGKYVVFFFYPLDFTF K D I Y K G 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 8 0 939.45493 Q06830 Q06830 28 35 PRDX1 Peroxiredoxin-1 yes yes 2 0.010796 109.86 By MS/MS 8.5 0.5 1 1 2 1980800 1980800 0 2391 1297 2474 5760;5761 4824 4824 1 34356 0 DISSSLNSLADSNAR NGNVEAKVVCLFRRRDISSSLNSLADSNAR DISSSLNSLADSNAREFEEESKQPGVSEQQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 0 15 0 1548.738 O94776 O94776 50 64 MTA2 Metastasis-associated protein MTA2 yes yes 2 2.1123E-16 251.91 By MS/MS 5 0 1 1 3445000 3445000 0 2392 365 2475 5762 4825 4825 1 34552 0 DISSTLIALADK NGNVEAKVVCFYRRRDISSTLIALADKHAT RRRDISSTLIALADKHATLSVCYKAGPGAD R D I D K H 2 0 0 2 0 0 0 0 0 2 2 1 0 0 0 2 1 0 0 0 0 0 12 0 1245.6816 Q13330 Q13330 50 61 MTA1 Metastasis-associated protein MTA1 yes yes 2 5.8958E-05 164.64 By MS/MS 4.5 0.5 1 1 2 302470 302470 0 2393 1371 2476 5763;5764 4826 4826 1 6900.4 0 DISTNYYASQK NMERIMKAQAYQTGKDISTNYYASQKKTFE QTGKDISTNYYASQKKTFEINPRHPLIRDM K D I Q K K 1 0 1 1 0 1 0 0 0 1 0 1 0 0 0 2 1 0 2 0 0 0 11 0 1288.5935 P14625 P14625 672 682 HSP90B1 Endoplasmin yes yes 2 4.4633E-07 197.79 By MS/MS By matching 4.33 0.471 2 1 2 1 3665100 3637300 27791 2394 615 2477 5765;5766;5767 4827 4827 1 327180 59213 DISTNYYASQKK NMERIMKAQAYQTGKDISTNYYASQKKTFE TGKDISTNYYASQKKTFEINPRHPLIRDML K D I K K T 1 0 1 1 0 1 0 0 0 1 0 2 0 0 0 2 1 0 2 0 0 0 12 1 1416.6885 P14625 P14625 672 683 HSP90B1 Endoplasmin yes yes 2 0.00025249 135.86 By MS/MS 4 0 1 1 767010 767010 0 2395 615 2478 5768 4828 4828 1 72181 0 DISTTLNADEAVAR RIPAVKERIAKFFGKDISTTLNADEAVARG KDISTTLNADEAVARGCALQCAILSPAFKV K D I A R G 3 1 1 2 0 0 1 0 0 1 1 0 0 0 0 1 2 0 0 1 0 0 14 0 1474.7264 O95757;Q92598 Q92598 361 374 HSPA4L;HSPH1 Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa no no 2 4.2959E-11 234.24 By MS/MS 4 0 1 1 2373700 2373700 0 2396 2059;424 2479 5769 4829 4829 1 223380 0 DITAEFLVK LHQQYKEASEVKPPRDITAEFLVKSKHRDL EVKPPRDITAEFLVKSKHRDLTALCKEYDE R D I V K S 1 0 0 1 0 0 1 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 9 0 1034.5648 O60341 O60341 473 481 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.0023983 116.25 By MS/MS 4 0 1 1 329190 329190 0 2397 255 2480 5770 4830 4830 1 30979 0 DITAFYDSLK WSVRLGQLLLSAKKRDITAFYDSLKLVRAE SAKKRDITAFYDSLKLVRAEQIVPLSAASF R D I L K L 1 0 0 2 0 0 0 0 0 1 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1171.5761 Q13535 Q13535 1815 1824 ATR Serine/threonine-protein kinase ATR yes yes 2 0.0064369 111.17 By MS/MS 2 0 1 1 0 0 0 2398 1395 2481 5771 4831 4831 1 0 0 DITEEIMSGAR ERKTIRIRDPNQGGKDITEEIMSGARTAST QGGKDITEEIMSGARTASTPTPPQTGGGLE K D I A R T 1 1 0 1 0 0 2 1 0 2 0 0 1 0 0 1 1 0 0 0 0 0 11 0 1220.5707 Q04637 Q04637 191 201 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 9.3494E-08 202.2 By MS/MS 2.4 0.49 3 2 5 6030700 6030700 0 2399 1291 2482;2483 5772;5773;5774;5775;5776 4832;4833;4834;4835;4836 4832 769 5 1920100 0 DITEEIMSGGGSR EKKTIRIRDPNQGGKDITEEIMSGGGSRNP GKDITEEIMSGGGSRNPTPPIGRPTSTPTP K D I S R N 0 1 0 1 0 0 2 3 0 2 0 0 1 0 0 2 1 0 0 0 0 0 13 0 1350.6085 O43432 O43432 153 165 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0051318 103.21 By MS/MS 2 0 1 1 177980 177980 0 2400 210 2484 5777 4837 4837 1 60200 0 DITLFHAMDTLQR IRQPSLHMSAAAASRDITLFHAMDTLQRNG SRDITLFHAMDTLQRNGYDLAKAMSTLVPQ R D I Q R N 1 1 0 2 0 1 0 0 1 1 2 0 1 1 0 0 2 0 0 0 0 0 13 0 1559.7766 O94776 O94776 228 240 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.0014393 113.77 By MS/MS 5 0 1 1 440450 440450 0 2401 365 2485 5778 4838 4838 1 4417.5 0 DIVENYFMR TVVDCPVCKQQCFSKDIVENYFMRDSGSKA QQCFSKDIVENYFMRDSGSKAATDAQDANQ K D I M R D 0 1 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 1 0 0 9 0 1185.5488 Q13263 Q13263 128 136 TRIM28 Transcription intermediary factor 1-beta yes yes 2 8.2076E-07 182.98 By MS/MS 4 0 2 2 2733800 2733800 0 2402 1367 2486;2487 5779;5780 4839;4840 4839 792 2 257260 0 DIVKELEVAIR EYSWNWNAIDEGPKRDIVKELEVAIRNRTD GPKRDIVKELEVAIRNRTDLRFGLYYSLFE R D I I R N 1 1 0 1 0 0 2 0 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 1 1283.7449 Q9BTY2 Q9BTY2 160 170 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.00078606 146.71 By MS/MS 6 0 1 1 923030 923030 0 2403 2320 2488 5781 4841 4841 1 6345.1 0 DIVQFVPFR DGGSLRSPLGEVAIRDIVQFVPFRQFQNAP GEVAIRDIVQFVPFRQFQNAPKEALAQCVL R D I F R Q 0 1 0 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 9 0 1119.6077 O75131;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 O75131 485 493 CPNE3;CPNE2;CPNE9;CPNE4;CPNE6;CPNE8;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 yes no 2 0.0014637 128.12 By MS/MS 7.33 1.25 1 1 1 3 3048900 3048900 0 2404 294 2489 5782;5783;5784 4842;4843;4844 4842 3 23245 0 DIVVLGVEKK EAVKKGSTAVGVRGRDIVVLGVEKKSVAKL GVRGRDIVVLGVEKKSVAKLQDERTVRKIC R D I K K S 0 0 0 1 0 0 1 1 0 1 1 2 0 0 0 0 0 0 0 3 0 0 10 1 1098.6649 O14818 O14818 39 48 PSMA7 Proteasome subunit alpha type-7 yes yes 2 0.0049515 114.97 By MS/MS 8 0 1 1 2589200 2589200 0 2405 140 2490 5785 4845 4845 1 32688 0 DKADFCIIHYAGK EQGTHPKFQKPKQLKDKADFCIIHYAGKVD LKDKADFCIIHYAGKVDYKADEWLMKNMDP K D K G K V 2 0 0 2 1 0 0 1 1 2 0 2 0 1 0 0 0 0 1 0 0 0 13 1 1536.7395 P35580;P35579 P35579 564 576 MYH10;MYH9 Myosin-10;Myosin-9 no no 3 0.00019158 216.84 By MS/MS 2 0 1 1 437170 437170 0 2406 824;825 2491 5786 4846 4846 1 147870 0 DKALQDYRK ______________________________ ______________________________ R D K R K K 1 1 0 2 0 1 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 9 2 1135.5986 P62333 P62333 6 14 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.0033739 142 By MS/MS 7 0 1 1 1064600 1064600 0 2407 1159 2492 5787 4847 4847 1 16712 0 DKATTSGSNSISVR KKAQQETGEREASCRDKATTSGSNSISVRA RDKATTSGSNSISVRAFLDEDDMSLEEIKN R D K V R A 1 1 1 1 0 0 0 1 0 1 0 1 0 0 0 4 2 0 0 1 0 0 14 1 1421.711 Q86XL3 Q86XL3 625 638 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2;3 6.2672E-08 251.75 By MS/MS 4 0 2 2 2079200 2079200 0 2408 1845 2493 5788;5789 4848;4849 4849 2 195670 0 DKDAYSSFGSR KGFYDKDSSGWSSSKDKDAYSSFGSRSDSR SSSKDKDAYSSFGSRSDSRGKSSFFSDRGS K D K S R S 1 1 0 2 0 0 0 1 0 0 0 1 0 1 0 3 0 0 1 0 0 0 11 1 1231.5469 O00571;O15523 O00571 65 75 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.000281 164.9 By MS/MS 5.75 0.829 2 1 1 4 12668000 12668000 0 2409 116 2494 5790;5791;5792;5793 4850;4851 4850 2 127430 0 DKDDDEVFEK FRKLLLNRCQKEFEKDKDDDEVFEKKQKEM KEFEKDKDDDEVFEKKQKEMDEAATAEERG K D K E K K 0 0 0 4 0 0 2 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 10 1 1238.5303 Q04637 Q04637 854 863 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 8.387E-07 184.71 By MS/MS 2 0 2 2 3193900 3193900 0 2410 1291 2495 5794;5795 4852;4853 4852 2 1080300 0 DKDDDEVFEKK FRKLLLNRCQKEFEKDKDDDEVFEKKQKEM EFEKDKDDDEVFEKKQKEMDEAATAEERGR K D K K K Q 0 0 0 4 0 0 2 0 0 0 0 3 0 1 0 0 0 0 0 1 0 0 11 2 1366.6252 Q04637 Q04637 854 864 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.3252E-05 181.4 By MS/MS 2 0 2 2 3005200 3005200 0 2411 1291 2496 5796;5797 4854;4855 4855 2 1016500 0 DKDPVNK KDDKKKKDAGKSAKKDKDPVNKSGGKAKKK DAGKSAKKDKDPVNKSGGKAKKKKWSKGKV K D K N K S 0 0 1 2 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 7 1 814.41848 P62851 P62851 19 25 RPS25 40S ribosomal protein S25 yes yes 2 0.0087431 172.03 By MS/MS 9.5 0.5 1 1 2 12263000 12263000 0 2412 1176 2497 5798;5799 4856 4856 1 344090 0 DKDTGELVALKK GIIGEGTYGQVYKAKDKDTGELVALKKVRL KAKDKDTGELVALKKVRLDNEKEGFPITAI K D K K K V 1 0 0 2 0 0 1 1 0 0 2 3 0 0 0 0 1 0 0 1 0 0 12 2 1315.7347 Q9NYV4 Q9NYV4 746 757 CDK12 Cyclin-dependent kinase 12 yes yes 3 0.040911 75.788 By MS/MS 2 0 1 1 184280 184280 0 2413 2639 2498 5800 4857 4857 1 62331 0 DKECGQLLISENQK GPTRQRKCGFCKSNRDKECGQLLISENQKV RDKECGQLLISENQKVAAHHKCMLFSSALV R D K Q K V 0 0 1 1 1 2 2 1 0 1 2 2 0 0 0 1 0 0 0 0 0 0 14 1 1660.809 Q8IWS0 Q8IWS0 25 38 PHF6 PHD finger protein 6 yes yes 2 0.00046634 179.67 By MS/MS 6.5 0.5 1 1 2 1222000 1222000 0 2414 1869 2499 5801;5802 4858 4858 1 16102 0 DKELEGLQVK SNKALLEMAEEKTVRDKELEGLQVKIQRLE EKTVRDKELEGLQVKIQRLEKLCRALQTER R D K V K I 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1157.6292 P40222 P40222 454 463 TXLNA Alpha-taxilin yes yes 2 7.9857E-07 185.6 By MS/MS 5 0 1 1 4007500 4007500 0 2415 857 2500 5803 4859 4859 1 40194 0 DKFNECGHVLYADIK FVRNLPFDFTWKMLKDKFNECGHVLYADIK DKFNECGHVLYADIKMENGKSKGCGVVKFE K D K I K M 1 0 1 2 1 0 1 1 1 1 1 2 0 1 0 0 0 0 1 1 0 0 15 1 1807.8563 P52272 P52272 671 685 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 3 0.018533 77.633 By MS/MS 5 0 1 1 2633300 2633300 0 2416 1012 2501 5804 4860 4860 1 26411 0 DKFSFDLGKGEVIK WLLDGTKFDSSLDRKDKFSFDLGKGEVIKA KDKFSFDLGKGEVIKAWDIAIATMKVGEVC K D K I K A 0 0 0 2 0 0 1 2 0 1 1 3 0 2 0 1 0 0 0 1 0 0 14 2 1581.8403 Q02790 Q02790 75 88 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 3 0.00037273 143.76 By MS/MS 6 0 1 1 3012000 3012000 0 2417 1279 2502 5805 4861 4861 1 20705 0 DKGEYTLVVK KHVGSRLYSVSYLLKDKGEYTLVVKWGDEH SYLLKDKGEYTLVVKWGDEHIPGSPYRVVV K D K V K W 0 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 2 0 0 10 1 1150.6234 P21333 P21333 2622 2631 FLNA Filamin-A yes yes 2 0.0049411 112.3 By MS/MS 2 0.816 1 1 1 3 2810800 2810800 0 2418 677 2503 5806;5807;5808 4862;4863 4863 2 689920 0 DKHPPELQVAFADCAADIK FRSDLREEILMLMARDKHPPELQVAFADCA PELQVAFADCAADIKSAYESQPIRQTAQDW R D K I K S 4 0 0 3 1 1 1 0 1 1 1 2 0 1 2 0 0 0 0 1 0 0 19 1 2124.031 Q96EY7 Q96EY7 538 556 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 3 7.268E-05 130.95 By MS/MS 5 0 1 1 4038600 4038600 0 2419 2151 2504 5809 4864 4864 1 40505 0 DKITRPGAK MDITHLDGHKVHISRDKITRPGAKLWKKGE KVHISRDKITRPGAKLWKKGEGLPNFDNNN R D K A K L 1 1 0 1 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 984.57163 Q9UBS4 Q9UBS4 290 298 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2;3 0.011503 127.46 By MS/MS 7 0 2 2 3124700 3124700 0 2420 2704 2505 5810;5811 4865;4866 4866 2 49052 0 DKLDQVSSEIK LAKHGMKVVLISRSKDKLDQVSSEIKEKFK SRSKDKLDQVSSEIKEKFKVETRTIAVDFA K D K I K E 0 0 0 2 0 1 1 0 0 1 1 2 0 0 0 2 0 0 0 1 0 0 11 1 1260.6561 Q53GQ0 Q53GQ0 85 95 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 5.9352E-05 185.96 By MS/MS 8 0 1 1 1199900 1199900 0 2421 1587 2506 5812 4867 4867 1 15149 0 DKLDQVSSEIKEK LAKHGMKVVLISRSKDKLDQVSSEIKEKFK SKDKLDQVSSEIKEKFKVETRTIAVDFASE K D K E K F 0 0 0 2 0 1 2 0 0 1 1 3 0 0 0 2 0 0 0 1 0 0 13 2 1517.7937 Q53GQ0 Q53GQ0 85 97 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 3.413E-32 317.4 By MS/MS 8 0 2 2 7433400 7433400 0 2422 1587 2507 5813;5814 4868;4869 4868 2 93845 0 DKLNNLVLFDK GGKAKKKKWSKGKVRDKLNNLVLFDKATYD GKVRDKLNNLVLFDKATYDKLCKEVPNYKL R D K D K A 0 0 2 2 0 0 0 0 0 0 3 2 0 1 0 0 0 0 0 1 0 0 11 1 1317.7293 P62851 P62851 42 52 RPS25 40S ribosomal protein S25 yes yes 2;3 1.8277E-08 227.94 By MS/MS 9.5 0.5 2 2 4 41173000 41173000 0 2423 1176 2508 5815;5816;5817;5818 4870;4871;4872;4873;4874 4870 5 1099300 0 DKLSELQLR QVGEHANDYAEIAAKDKLSELQLRVRQLVE AEIAAKDKLSELQLRVRQLVEQVEQIQKEQ K D K L R V 0 1 0 1 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 1 1100.619 Q9BVK6 Q9BVK6 159 167 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 0.0021515 148.69 By MS/MS 8.5 0.5 1 1 2 5740600 5740600 0 2424 2334 2509 5819;5820 4875 4875 1 108940 0 DKLTELQLR QVGEHANNYPEIAAKDKLTELQLRARQLLD PEIAAKDKLTELQLRARQLLDQVEQIQKEQ K D K L R A 0 1 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 9 1 1114.6346 Q7Z7H5 Q7Z7H5 151 159 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 2 0.0038587 138.08 By MS/MS 9 0 1 1 561320 561320 0 2425 1806 2510 5821 4876 4876 1 11047 0 DKNEQAFEEVFQNANFR EAILGQNAAYLGELKDKNEQAFEEVFQNAN NEQAFEEVFQNANFRSFIFRVRVKVETYND K D K F R S 2 1 3 1 0 2 3 0 0 0 0 1 0 3 0 0 0 0 0 1 0 0 17 1 2084.9552 P27694 P27694 552 568 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 3 0.00017928 140.93 By MS/MS 5 0 1 1 265890 265890 0 2426 744 2511 5822 4877 4877 1 2666.7 0 DKNSVNFK SDRDLLAVVFYGTEKDKNSVNFKNIYVLQE VFYGTEKDKNSVNFKNIYVLQELDNPGAKR K D K F K N 0 0 2 1 0 0 0 0 0 0 0 2 0 1 0 1 0 0 0 1 0 0 8 1 950.48214 P12956 P12956 93 100 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.035372 115.49 By MS/MS 5 0 1 1 660290 660290 0 2427 596 2512 5823 4878 4878 1 6622.4 0 DKNTDTLSKK NIFAIINLFKQYSKKDKNTDTLSKKELKEL QYSKKDKNTDTLSKKELKELLEKEFRQILK K D K K K E 0 0 1 2 0 0 0 0 0 0 1 3 0 0 0 1 2 0 0 0 0 0 10 2 1148.6037 CON__P20930;P20930 CON__P20930 22 31 FLG Filaggrin yes no 3 0.028192 104.43 By MS/MS 3 0 1 1 149230 0 149230 + 2428 53 2513 5824 4879 4879 1 0 18994 DKPHVNVGTIGHVDHGK LCRGLAVEAKKTYVRDKPHVNVGTIGHVDH PHVNVGTIGHVDHGKTTLTAAITKILAEGG R D K G K T 0 0 1 2 0 0 0 3 3 1 0 2 0 0 1 0 1 0 0 3 0 0 17 1 1808.9282 P49411 P49411 54 70 TUFM Elongation factor Tu, mitochondrial yes yes 3;4;5 0.00035744 159.14 By MS/MS 6.75 0.433 1 3 4 21911000 21911000 0 2429 949 2514 5825;5826;5827;5828 4880;4881;4882 4882 3 335570 0 DKPLKDVIIADCGK MEVVRKVESTKTDSRDKPLKDVIIADCGKI RDKPLKDVIIADCGKIEVEKPFAIAKE___ R D K G K I 1 0 0 3 1 0 0 1 0 2 1 3 0 0 1 0 0 0 0 1 0 0 14 2 1570.8389 P23284 P23284 191 204 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 3 0.028363 100.11 By MS/MS 9 0 1 1 853130 853130 0 2430 702 2515 5829 4883 4883 1 16790 0 DKPNPQLIYDDEIPSLK IPKYGLEGTVFFEEKDKPNPQLIYDDEIPS PNPQLIYDDEIPSLKIEDTVFHVFDKVKVK K D K L K I 0 0 1 3 0 1 1 0 0 2 2 2 0 0 3 1 0 0 1 0 0 0 17 1 1984.0153 Q9Y2L1 Q9Y2L1 879 895 DIS3 Exosome complex exonuclease RRP44 yes yes 3 0.00021422 144.18 By MS/MS 4 0 1 1 489850 489850 0 2431 2834 2516 5830 4884 4884 1 46098 0 DKQDADRPLSK TELQEKETPTQVYQKDKQDADRPLSKMNRA VYQKDKQDADRPLSKMNRAVNGETLKTGGD K D K S K M 1 1 0 3 0 1 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 11 2 1271.647 Q5SW79 Q5SW79 690 700 CEP170 Centrosomal protein of 170 kDa yes yes 2;3 0.001156 147.3 By MS/MS 2.33 0.471 2 1 3 945540 945540 0 2432 1623 2517 5831;5832;5833 4885;4886 4886 2 230750 0 DKQTESLVEK PFHTIMKQLLSYITKDKQTESLVEKLCQRF SYITKDKQTESLVEKLCQRFRTSRTERQQR K D K E K L 0 0 0 1 0 1 2 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 10 1 1175.6034 Q15021 Q15021 1200 1209 NCAPD2 Condensin complex subunit 1 yes yes 2 0.005796 120.27 By MS/MS 3 0 1 1 478880 478880 0 2433 1474 2518 5834 4887 4887 1 8762.2 0 DKSDSPAIQLR NREREWEREVLGIKRDKSDSPAIQLRLKEP GIKRDKSDSPAIQLRLKEPMDVDVEDYYPA R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.0048642 121.9 By MS/MS 3 0 1 1 429360 429360 0 2434 2235 2519 5835 4888 4888 1 7856.1 0 DKSEEVQK LNEQKNLHSEISGKRDKSEEVQKIAELCAN SEISGKRDKSEEVQKIAELCANSIKDYELQ R D K Q K I 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 8 1 961.47164 P15924 P15924 942 949 DSP Desmoplakin yes yes 2 0.00065362 174.16 By MS/MS 2 0 1 1 264660 264660 0 2435 628 2520 5836 4889 4889 1 89517 0 DKVIPLYGR PNRQVCPVCKAGISRDKVIPLYGRGSTGQQ KAGISRDKVIPLYGRGSTGQQDPREKTPPR R D K G R G 0 1 0 1 0 0 0 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 9 1 1059.6077 Q96GF1 Q96GF1 86 94 RNF185 E3 ubiquitin-protein ligase RNF185 yes yes 2;3 0.017145 112.41 By MS/MS 9 0 2 2 3309000 3309000 0 2436 2161 2521 5837;5838 4890;4891 4890 2 65121 0 DKVLTAEELNAAQTSVAYGCIK EGLKRSMDKLKEKERDKVLTAEELNAAQTS ELNAAQTSVAYGCIKYADLSHNRLNDYIFS R D K I K Y 4 0 1 1 1 1 2 1 0 1 2 2 0 0 0 1 2 0 1 2 0 0 22 1 2380.1944 P54136 P54136 483 504 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.003878 80.994 By MS/MS 5 0 1 1 1539800 1539800 0 2437 1043 2522 5839 4892 4892 1 15443 0 DKVQAGDVITIDK TIYDLGTKMIESLTKDKVQAGDVITIDKAT TKDKVQAGDVITIDKATGKISKLGRSFTRA K D K D K A 1 0 0 3 0 1 0 1 0 2 0 2 0 0 0 0 1 0 0 2 0 0 13 1 1400.7511 Q9Y230 Q9Y230 185 197 RUVBL2 RuvB-like 2 yes yes 2 4.994E-05 196.27 By MS/MS 6 0 1 1 5586100 5586100 0 2438 2810 2523 5840 4893;4894;4895 4894 3 38400 0 DKVQAGDVITIDKATGK TIYDLGTKMIESLTKDKVQAGDVITIDKAT VQAGDVITIDKATGKISKLGRSFTRARDYD K D K G K I 2 0 0 3 0 1 0 2 0 2 0 3 0 0 0 0 2 0 0 2 0 0 17 2 1757.9523 Q9Y230 Q9Y230 185 201 RUVBL2 RuvB-like 2 yes yes 3 7.6797E-11 226.06 By MS/MS 6 0 1 1 9231800 9231800 0 2439 2810 2524 5841 4896 4896 1 63462 0 DKVSTTVR GTHENPELIWNDNSRDKVSTTVREMMLEHF IWNDNSRDKVSTTVREMMLEHFKNQQDNPE R D K V R E 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 2 0 0 8 1 904.49779 O75165 O75165 1936 1943 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.035372 115.49 By MS/MS 2 0 1 1 309690 309690 0 2440 302 2525 5842 4897 4897 1 104750 0 DKWSNFDPTGLER EGGGDRGLGDRPAPKDKWSNFDPTGLERAA PKDKWSNFDPTGLERAAKAARELEHSRYAK K D K E R A 0 1 1 2 0 0 1 1 0 0 1 1 0 1 1 1 1 1 0 0 0 0 13 1 1563.7318 Q9NVI7;Q5T9A4 Q5T9A4 45 57 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2;3 0.00043393 169.21 By MS/MS 5.5 0.5 2 2 4 10742000 10742000 0 2441 2598;1638 2526 5843;5844;5845;5846 4898;4899 4898 2 101390 0 DKYEPAAVSEQGDKK ______________________________ DKYEPAAVSEQGDKKGKKGKKDRDMDELKK R D K K K G 2 0 0 2 0 1 2 1 0 0 0 3 0 0 1 1 0 0 1 1 0 0 15 2 1663.8053 P05023 P05023 8 22 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.00026583 128.45 By MS/MS 2.5 1.12 1 1 1 1 4 1876100 1876100 0 2442 481 2527 5847;5848;5849;5850 4900;4901;4902;4903 4902 4 183580 0 DKYKQIFLGGVDK VIRYFPTQALNFAFKDKYKQIFLGGVDKRT FKDKYKQIFLGGVDKRTQFWLYFAGNLASG K D K D K R 0 0 0 2 0 1 0 2 0 1 1 3 0 1 0 0 0 0 1 1 0 0 13 2 1509.8191 P05141;P12236 P05141 93 105 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3 0.00039103 135.94 By MS/MS 8 0 1 1 1764600 1764600 0 2443 487;589 2528 5851 4904 4904 1 22278 0 DLADVAAR VTARPTAVNMARAARDLADVAAREAEREGA NMARAARDLADVAAREAEREGATEEAVRER R D L A R E 3 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 829.42938 Q9BV20 Q9BV20 102 109 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.038568 86.833 By MS/MS 7 0 1 1 352800 352800 0 2444 2328 2529 5852 4905 4905 1 5538.3 0 DLAEQCVK CNRLVVVELNNRTSRDLAEQCVKVLELICT LNNRTSRDLAEQCVKVLELICTRESGAVFE R D L V K V 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 961.45388 Q9ULT8 Q9ULT8 118 125 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.018551 101.25 By MS/MS 2 0.816 1 1 1 3 649150 649150 0 2445 2774 2530 5853;5854;5855 4906 4906 1 136640 0 DLAFVDPEDCTPLSTITR YEEERSNIVDMLYLKDLAFVDPEDCTPLST FVDPEDCTPLSTITRFYNHPLHFVFNDTKL K D L T R F 1 1 0 3 1 0 1 0 0 1 2 0 0 1 2 1 3 0 0 1 0 0 18 0 2048.9725 Q8NE01 Q8NE01 367 384 CNNM3 Metal transporter CNNM3 yes yes 2 0.00016774 139.74 By MS/MS 5 0 1 1 112560 112560 0 2446 1958 2531 5856 4907 4907 1 1128.9 0 DLALAAEALR LQGCLDALGHYKQSKDLALAAEALRVARGH YKQSKDLALAAEALRVARGHLTRLTGGGGT K D L L R V 4 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1041.5819 Q969Y2 Q969Y2 453 462 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 0.00029385 140.75 By MS/MS 6.5 0.5 1 1 2 2980700 2980700 0 2447 2098 2532 5857;5858 4908;4909 4908 2 25014 0 DLAPYLPSVTPGLK AAQIIGNMYSLTDQKDLAPYLPSVTPGLKA KDLAPYLPSVTPGLKASLLDPVPEVRTVSA K D L L K A 1 0 0 1 0 0 0 1 0 0 3 1 0 0 3 1 1 0 1 1 0 0 14 0 1469.813 Q92616 Q92616 1650 1663 GCN1L1 Translational activator GCN1 yes yes 2 0.0059189 101.39 By MS/MS 2 0 1 1 649780 649780 0 2448 2064 2533 5859 4910 4910 1 219780 0 DLAVENPVKYQGLGR SLVLLEDVDAAFLSRDLAVENPVKYQGLGR DLAVENPVKYQGLGRLTFSGLLNALDGVAS R D L G R L 1 1 1 1 0 1 1 2 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 1 1657.8788 Q9Y276 Q9Y276 292 306 BCS1L Mitochondrial chaperone BCS1 yes yes 2;3 0.00078559 118.76 By MS/MS 7 0 2 2 1460800 1460800 0 2449 2817 2534 5860;5861 4911;4912 4911 1 22931 0 DLAYCVSQLPLTER LCQRFRTSRTERQQRDLAYCVSQLPLTERG RDLAYCVSQLPLTERGLRKMLDNFDCFGDK R D L E R G 1 1 0 1 1 1 1 0 0 0 3 0 0 0 1 1 1 0 1 1 0 0 14 0 1663.824 Q15021 Q15021 1225 1238 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0010603 124.12 By MS/MS 3.5 0.5 1 1 2 482210 482210 0 2450 1474 2535 5862;5863 4913;4914 4914 2 39326 0 DLCGIVASK ALKLESCGVTSDNCRDLCGIVASKASLREL TSDNCRDLCGIVASKASLRELALGSNKLGD R D L S K A 1 0 0 1 1 0 0 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 961.49027 P13489 P13489 218 226 RNH1 Ribonuclease inhibitor yes yes 1;2 0.0061796 107.15 By MS/MS 7 0 2 2 3255600 3255600 0 2451 601 2536 5864;5865 4915;4916 4915 2 51108 0 DLCNTHLMR TLLNTSPEGWKLLKKDLCNTHLMRVLVQTL WKLLKKDLCNTHLMRVLVQTLCEPASIGFN K D L M R V 0 1 1 1 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1158.5274 P78527 P78527 1362 1370 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.049645 76.1 By MS/MS 2 0 1 1 660310 660310 0 2452 1225 2537 5866 4917 4917 1 223340 0 DLDAPDDVDFF NRMVRGDPRAIVEYRDLDAPDDVDFF____ VEYRDLDAPDDVDFF_______________ R D L F F - 1 0 0 5 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 11 0 1267.5245 Q9BXP5 Q9BXP5 866 876 SRRT Serrate RNA effector molecule homolog yes yes 2 0.010516 90.601 By MS/MS 4 0 1 1 58409 58409 0 2453 2358 2538 5867 4918 4918 1 5496.6 0 DLDIFDR QKVFDVRLNGHVVVKDLDIFDRVGHSTAHD LNGHVVVKDLDIFDRVGHSTAHDEIIPMSI K D L D R V 0 1 0 3 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 892.42905 Q14165 Q14165 152 158 MLEC Malectin yes yes 2 0.036022 100.19 By MS/MS 8 0 1 1 324420 324420 0 2454 1426 2539 5868 4919 4919 1 4095.8 0 DLDIYYK REMMIVMRTTELVNKDLDIYYKTLDQAIMK RTTELVNKDLDIYYKTLDQAIMKFHSMKME K D L Y K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 7 0 928.4542 Q92878 Q92878 1120 1126 RAD50 DNA repair protein RAD50 yes yes 2 0.03081 104.11 By MS/MS 3 0 1 1 285770 285770 0 2455 2074 2540 5869 4920 4920 1 5228.9 0 DLDNAGELGR ASAFRNVNTRRATQRDLDNAGELGRSRGEQ RATQRDLDNAGELGRSRGEQEGDEEEEGHI R D L G R S 1 1 1 2 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1058.4993 O95602 O95602 1376 1385 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.0012537 118.71 By MS/MS 2 0 1 1 361410 361410 0 2456 418 2541 5870 4921 4921 1 122240 0 DLDQASLAAVSQQLAPR LECETAIAALNSCLRDLDQASLAAVSQQLA DQASLAAVSQQLAPREGISQEALHTQMLTA R D L P R E 4 1 0 2 0 3 0 0 0 0 3 0 0 0 1 2 0 0 0 1 0 0 17 0 1781.9272 Q9Y490 Q9Y490 1674 1690 TLN1 Talin-1 yes yes 2 0.00026971 134.04 By MS/MS 2 0 1 1 265170 265170 0 2457 2888 2542 5871 4922;4923 4923 2 89692 0 DLDQLFLSSDCR NLTAFPGGAKELLLRDLDQLFLSSDCRHFN LLRDLDQLFLSSDCRHFNRTESLRLADELS R D L C R H 0 1 0 3 1 1 0 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 12 0 1467.6664 Q99941 Q99941 491 502 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.0010559 124.12 By MS/MS 4 0 1 1 262670 262670 0 2458 2272 2543 5872 4924 4924 1 24719 0 DLDRIAGQVAAANK KDQDGGRKLTPQGQRDLDRIAGQVAAANKK RDLDRIAGQVAAANKKH_____________ R D L N K K 4 1 1 2 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 14 1 1440.7685 P39019 P39019 130 143 RPS19 40S ribosomal protein S19 yes yes 2;3 0.0033027 131.17 By MS/MS By matching 10 0 3 2 1 26598000 26517000 81574 2459 853 2544 5873;5874;5875 4925;4926 4925 2 1429200 104440 DLDRIAGQVAAANKK KDQDGGRKLTPQGQRDLDRIAGQVAAANKK DLDRIAGQVAAANKKH______________ R D L K K H 4 1 1 2 0 1 0 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 15 2 1568.8635 P39019 P39019 130 144 RPS19 40S ribosomal protein S19 yes yes 2;3 0.0005356 140.45 By MS/MS 10 0 2 2 13869000 13869000 0 2460 853 2545 5876;5877 4927;4928 4927 2 747490 0 DLDSYLK ILTNFTGVMPPQFKKDLDSYLKTRSPVTFL VMPPQFKKDLDSYLKTRSPVTFLSDLRSNL K D L L K T 0 0 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 7 0 852.4229 A5YKK6 A5YKK6 2179 2185 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.027749 106.42 By MS/MS 2 0 1 1 302240 302240 0 2461 19 2546 5878 4929 4929 1 102230 0 DLDYYGTLLK SAVKVLMKFMEMLSKDLDYYGTLLKKLAPP EMLSKDLDYYGTLLKKLAPPLVTLLSAEPE K D L L K K 0 0 0 2 0 0 0 1 0 0 3 1 0 0 0 0 1 0 2 0 0 0 10 0 1199.6074 Q10567 Q10567 273 282 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.0002553 143.37 By MS/MS 4 0 1 1 396170 396170 0 2462 1322 2547 5879 4930 4930 1 37282 0 DLEAEHVEVEDTTLNR ______________________________ LEAEHVEVEDTTLNRCSCSFRVLVVSAKFE R D L N R C 1 1 1 2 0 0 4 0 1 0 2 0 0 0 0 0 2 0 0 2 0 0 16 0 1868.8752 Q9H3K6 Q9H3K6 15 30 BOLA2 BolA-like protein 2 yes yes 2 4.3741E-11 234.87 By MS/MS 10 0 1 1 1059300 1059300 0 2463 2437 2548 5880 4931 4931 1 57095 0 DLEAHIDSANK SMAVAARKKLEMDLKDLEAHIDSANKNRDE MDLKDLEAHIDSANKNRDEAIKQLRKLQAQ K D L N K N 2 0 1 2 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1211.5782 P35579 P35579 1621 1631 MYH9 Myosin-9 yes yes 2 0.003623 107.55 By MS/MS 2 0 1 1 121100 121100 0 2464 824 2549 5881 4932 4932 1 40960 0 DLEASIAR KDNQQKANEVEQMIRDLEASIARYKEEYAV EVEQMIRDLEASIARYKEEYAVLISEAQAI R D L A R Y 2 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 873.4556 Q14204 Q14204 3439 3446 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0038052 131.03 By MS/MS 2 0.816 1 1 1 3 2050300 2050300 0 2465 1433 2550 5882;5883;5884 4933;4934 4933 2 465150 0 DLECALLLR QDLLREDLNKKQTQKDLECALLLRQHEATR KKQTQKDLECALLLRQHEATRELELRQLQA K D L L R Q 1 1 0 1 1 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1101.5852 Q9UL54 Q9UL54 674 682 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.0019318 122.18 By MS/MS 3 0 1 1 253440 253440 0 2466 2770 2551 5885 4935 4935 1 4637.2 0 DLEDESTPIVK EQPTSQRDRLSQVLRDLEDESTPIVKLGDA QVLRDLEDESTPIVKLGDASIAAPFTSKLS R D L V K L 0 0 0 2 0 0 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1244.6136 Q9HD20 Q9HD20 940 950 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0017332 137.05 By MS/MS 2 0 1 1 0 0 0 2467 2517 2552 5886 4936 4936 1 0 0 DLEDKEGEIQAGAK ALSEQINIFFDYSGRDLEDKEGEIQAGAKL RDLEDKEGEIQAGAKLSLNRQFFDERWSKH R D L A K L 2 0 0 2 0 1 3 2 0 1 1 2 0 0 0 0 0 0 0 0 0 0 14 1 1501.726 Q13409 Q13409 251 264 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 0.00035384 158.34 By MS/MS 5 0 1 1 868600 868600 0 2468 1379 2553 5887 4937 4937 1 8711.7 0 DLEDQEQLLR SRDCPIFYMRKKVRKDLEDQEQLLRRFGPP KKVRKDLEDQEQLLRRFGPPGPEAW_____ K D L L R R 0 1 0 2 0 2 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1257.6201 P28340 P28340 1088 1097 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.001173 120.27 By MS/MS 3 0 1 1 203730 203730 0 2469 754 2554 5888 4938 4938 1 3727.7 0 DLEEDHACIPIK IIAGAGELHLEICLKDLEEDHACIPIKKSD CLKDLEEDHACIPIKKSDPVVSYRETVSEE K D L I K K 1 0 0 2 1 0 2 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 12 0 1438.6762 P13639 P13639 560 571 EEF2 Elongation factor 2 yes yes 2;3 6.0025E-06 148.32 By MS/MS 4.5 0.5 2 2 4 4037100 4037100 0 2470 602 2555 5889;5890;5891;5892 4939;4940 4939 2 305470 0 DLEEDHACIPIKK IIAGAGELHLEICLKDLEEDHACIPIKKSD LKDLEEDHACIPIKKSDPVVSYRETVSEES K D L K K S 1 0 0 2 1 0 2 0 1 2 1 2 0 0 1 0 0 0 0 0 0 0 13 1 1566.7712 P13639 P13639 560 572 EEF2 Elongation factor 2 yes yes 2;3 0.0047662 119.03 By MS/MS 4.8 0.748 2 2 1 5 10214000 10214000 0 2471 602 2556 5893;5894;5895;5896;5897 4941;4942;4943 4942 3 758520 0 DLEEFFSTVGK RTVFCMQLAARIRPRDLEEFFSTVGKVRDV IRPRDLEEFFSTVGKVRDVRMISDRNSRRS R D L G K V 0 0 0 1 0 0 2 1 0 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1270.6081 Q14498 Q14498 168 178 RBM39 RNA-binding protein 39 yes yes 2 2.9243E-06 179.81 By MS/MS 5 0.816 1 1 1 3 1562200 1562200 0 2472 1441 2557 5898;5899;5900 4944;4945 4944 2 17429 0 DLEEKLETLR PSPSKEEEGLRAQVRDLEEKLETLRLKRAE RAQVRDLEEKLETLRLKRAEDKAKLKELEK R D L L R L 0 1 0 1 0 0 3 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 10 1 1244.6612 Q14203 Q14203 226 235 DCTN1 Dynactin subunit 1 yes yes 2 1.0158E-26 261.6 By MS/MS 4 0.816 1 1 1 3 1588700 1588700 0 2473 1432 2558 5901;5902;5903 4946;4947 4946 2 67064 0 DLEEVKVLLEK ______________________________ ELQKDLEEVKVLLEKATRKRVRDALTAEKS K D L E K A 0 0 0 1 0 0 3 0 0 0 3 2 0 0 0 0 0 0 0 2 0 0 11 1 1313.7442 Q9HB71 Q9HB71 9 19 CACYBP Calcyclin-binding protein yes yes 2 6.1647E-05 170.89 By MS/MS 8 0 1 1 378270 378270 0 2474 2501 2559 5904 4948 4948 1 4775.6 0 DLEGLSQR GCLETAEEVKRKLQKDLEGLSQRHEEKVAA VKRKLQKDLEGLSQRHEEKVAAYDKLEKTK K D L Q R H 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 916.46141 P35579 P35579 1393 1400 MYH9 Myosin-9 yes yes 2 0.021993 97.431 By MS/MS 2 0 1 1 567180 567180 0 2475 824 2560 5905 4949 4949 1 191840 0 DLEGLSQRHEEK GCLETAEEVKRKLQKDLEGLSQRHEEKVAA LQKDLEGLSQRHEEKVAAYDKLEKTKTRLQ K D L E K V 0 1 0 1 0 1 3 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 12 1 1439.7005 P35579 P35579 1393 1404 MYH9 Myosin-9 yes yes 3 0.035975 67.385 By MS/MS 2 0 1 1 1218200 1218200 0 2476 824 2561 5906 4950 4950 1 412030 0 DLEGSDIDTR DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC EYIRRDLEGSDIDTRRRAACDLVRGLCKFF R D L T R R 0 1 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1119.5044 P55060 P55060 373 382 CSE1L Exportin-2 yes yes 2 7.0962E-08 195.57 By MS/MS 4.5 0.5 1 1 2 3307300 3307300 0 2477 1053 2562 5907;5908 4951 4951 1 301260 0 DLEGSDIDTRR DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC YIRRDLEGSDIDTRRRAACDLVRGLCKFFE R D L R R R 0 2 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 11 1 1275.6055 P55060 P55060 373 383 CSE1L Exportin-2 yes yes 2 0.032471 92.051 By MS/MS 4 0 1 1 1595100 1595100 0 2478 1053 2563 5909 4952 4952 1 150110 0 DLEIKIPVVVR MRCDVIAQGIVMAVKDLEIKIPVVVRLQGT MAVKDLEIKIPVVVRLQGTRVDDAKALIAD K D L V R L 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 0 0 0 0 3 0 0 11 1 1279.7864 Q9P2R7 Q9P2R7 397 407 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2;3 1.2674E-05 163.84 By MS/MS 7 0 2 2 1236900 1236900 0 2479 2690 2564 5910;5911 4953;4954 4954 2 19416 0 DLEKPFLLPVEAVYSVPGR KLLDAVDTYIPVPARDLEKPFLLPVEAVYS PFLLPVEAVYSVPGRGTVVTGTLERGILKK R D L G R G 1 1 0 1 0 0 2 1 0 0 3 1 0 1 3 1 0 0 1 3 0 0 19 1 2128.1568 P49411 P49411 253 271 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0021468 91.065 By MS/MS 7 0.816 1 1 1 3 2111500 2111500 0 2480 949 2565 5912;5913;5914 4955;4956;4957;4958 4956 4 26431 0 DLEKWQNNLLPSR NKCGVISPRFDVQLKDLEKWQNNLLPSRQF LKDLEKWQNNLLPSRQFGFIVLTTSAGIMD K D L S R Q 0 1 2 1 0 1 1 0 0 0 3 1 0 0 1 1 0 1 0 0 0 0 13 1 1611.8369 P62244 P62244 85 97 RPS15A 40S ribosomal protein S15a yes yes 2 0.032003 109.72 By MS/MS 10 0 1 1 0 0 0 2481 1144 2566 5915 4959 4959 1 0 0 DLELAVPGTYDPNQPIIR SLELQYVSPKLLMCRDLELAVPGTYDPNQP LAVPGTYDPNQPIIRIQSIAPSLQVITSKQ R D L I R I 1 1 1 2 0 1 1 1 0 2 2 0 0 0 3 0 1 0 1 1 0 0 18 0 2010.0422 P42345 P42345 2135 2152 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00032549 141.73 By MS/MS 2 0 1 1 185210 185210 0 2482 879 2567 5916 4960 4960 1 62646 0 DLENLGER KRTIEALMDRGAIVRDLENLGERALPYRIS DRGAIVRDLENLGERALPYRISAHSQQHNR R D L E R A 0 1 1 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 944.45632 P82932 P82932 38 45 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.015683 104.44 By MS/MS By matching 10 0 2 1 1 5766500 5669000 97496 2483 1238 2568 5917;5918 4961 4961 1 305540 124820 DLETSCSDIR LQGGQEATDIALLLRDLETSCSDIRQFCKK ALLLRDLETSCSDIRQFCKKIRRRMPGTDA R D L I R Q 0 1 0 2 1 0 1 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1194.5187 Q14203 Q14203 786 795 DCTN1 Dynactin subunit 1 yes yes 2 2.2925E-08 200.86 By MS/MS 3 0 1 1 1435700 1435700 0 2484 1432 2569 5919 4962 4962 1 26270 0 DLEVTCDPDSGGSQGLR LGVGQMDWGNNLGLRDLEVTCDPDSGGSQG EVTCDPDSGGSQGLRGCGVGQMDWTQDLAP R D L L R G 0 1 0 3 1 1 1 3 0 0 2 0 0 0 1 2 1 0 0 1 0 0 17 0 1804.7898 Q9C0C2 Q9C0C2 1319 1335 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 1.9281E-17 268.08 By MS/MS 2 0 1 1 444570 444570 0 2485 2390 2570 5920 4963 4963 1 150370 0 DLFALAR EFLEMFVGVGPARVRDLFALARKNAPCILF GVGPARVRDLFALARKNAPCILFIDEIDAV R D L A R K 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 804.44939 Q9Y4W6 Q9Y4W6 391 397 AFG3L2 AFG3-like protein 2 yes yes 2 0.016436 118.69 By MS/MS 5 0 1 1 631170 631170 0 2486 2902 2571 5921 4964 4964 1 6330.3 0 DLFDPIIEDR VGCVAGDEESYEVFKDLFDPIIEDRHGGYK YEVFKDLFDPIIEDRHGGYKPSDEHKTDLN K D L D R H 0 1 0 3 0 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1231.6085 P12277 P12277 87 96 CKB Creatine kinase B-type yes yes 2 0.00045132 134.23 By MS/MS 8.5 1.5 1 1 2 1113300 1113300 0 2487 592 2572 5922;5923 4965;4966 4965 2 17477 0 DLFEDELVPLFEK QPSVGTEIFVGKIPRDLFEDELVPLFEKAG PRDLFEDELVPLFEKAGPIWDLRLMMDPLT R D L E K A 0 0 0 2 0 0 3 0 0 0 3 1 0 2 1 0 0 0 0 1 0 0 13 0 1592.7974 O60506 O60506 172 184 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 2 0.0091374 103.43 By MS/MS 5.5 0.5 1 1 2 133140 133140 0 2488 261 2573 5924;5925 4967;4968 4967 2 1066.5 0 DLFHGATFVPR PYHKQRLAEYYGLYRDLFHGATFVPRVPLH GLYRDLFHGATFVPRVPLHVAYAVGEDDLM R D L P R V 1 1 0 1 0 0 0 1 1 0 1 0 0 2 1 0 1 0 0 1 0 0 11 0 1258.6459 Q96DV4 Q96DV4 160 170 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2;3 0.0003057 135.43 By MS/MS 7.33 0.471 2 1 3 6140100 6140100 0 2489 2138 2574 5926;5927;5928 4969;4970 4969 2 96267 0 DLFQVAFNR KGVTDHTQRLSIITKDLFQVAFNRVARGML LSIITKDLFQVAFNRVARGMLHQDHITFAM K D L N R V 1 1 1 1 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 9 0 1108.5665 Q14204 Q14204 3862 3870 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0051411 108.98 By MS/MS 3 1.41 1 1 1 1 1 5 1573200 1573200 0 2490 1433 2575 5929;5930;5931;5932;5933 4971;4972;4973;4974 4973 4 340500 0 DLFTASNDPLLWR LLDVRSVLSLSAVCRDLFTASNDPLLWRFL CRDLFTASNDPLLWRFLYLRDFRDNTVRVQ R D L W R F 1 1 1 2 0 0 0 0 0 0 3 0 0 1 1 1 1 1 0 0 0 0 13 0 1546.778 Q9Y3I1 Q9Y3I1 361 373 FBXO7 F-box only protein 7 yes yes 2 0.03511 73.435 By MS/MS 6 0 1 1 49555 49555 0 2491 2879 2576 5934 4975 4975 0 340.65 0 DLFVDLVEK LVNVAAKLTHNKDVRDLFVDLVEKFVEPCR HNKDVRDLFVDLVEKFVEPCRSDHWPLSDV R D L E K F 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 9 0 1076.5754 O43427 O43427 301 309 FIBP Acidic fibroblast growth factor intracellular-binding protein yes yes 2 0.010366 99.802 By MS/MS 7 0 1 1 75059 75059 0 2492 209 2577 5935 4976 4976 1 1178.3 0 DLGAYLR KLCEEWPVDETKRGRDLGAYLRQRVAQAFR VDETKRGRDLGAYLRQRVAQAFREGENTQV R D L L R Q 1 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 806.42865 Q9BRT2 Q9BRT2 26 32 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 0.03963 97.473 By MS/MS 10 0 1 1 491790 491790 0 2493 2300 2578 5936 4977 4977 1 26506 0 DLGCHVELR SAHRDCEDVAKAALRDLGCHVELRELWTGQ AKAALRDLGCHVELRELWTGQRGNLAP___ R D L L R E 0 1 0 1 1 0 1 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1097.5288 Q6NXE6 Q6NXE6 481 489 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 0.023754 87.308 By MS/MS 6.5 0.5 1 1 2 1529600 1529600 0 2494 1692 2579 5937;5938 4978 4978 1 18489 0 DLGDLIEATEFDR RPEARRGNVKDAVLKDLGDLIEATEFDRLF LKDLGDLIEATEFDRLFEGTGARLRGMPET K D L D R L 1 1 0 3 0 0 2 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 13 0 1492.7046 Q6NXR4 Q6NXR4 54 66 TTI2 TELO2-interacting protein 2 yes yes 2 0.0011897 122.7 By MS/MS 6 0 1 1 195000 195000 0 2495 1693 2580 5939 4979 4979 1 1340.5 0 DLGFFGIYK EITTGPRVSALSVVRDLGFFGIYKGAKACF ALSVVRDLGFFGIYKGAKACFLRDIPFSAI R D L Y K G 0 0 0 1 0 0 0 2 0 1 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1058.5437 Q9UJS0 Q9UJS0 476 484 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00035069 151.29 By MS/MS 6.67 1.49 2 1 1 1 1 6 9356700 9356700 0 2496 2748 2581 5940;5941;5942;5943;5944;5945 4980;4981;4982;4983;4984;4985;4986;4987 4986 8 93419 0 DLGFFGIYKGAK EITTGPRVSALSVVRDLGFFGIYKGAKACF VVRDLGFFGIYKGAKACFLRDIPFSAIYFP R D L A K A 1 0 0 1 0 0 0 3 0 1 1 2 0 2 0 0 0 0 1 0 0 0 12 1 1314.6972 Q9UJS0 Q9UJS0 476 487 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.016471 108.43 By MS/MS 5 0 1 1 1006900 1006900 0 2497 2748 2582 5946 4988 4988 1 10099 0 DLGGAAEGGAR LYFNELSSEGRQVLRDLGGAAEGGARVVVS QVLRDLGGAAEGGARVVVSLTEGTAVSEYW R D L A R V 3 1 0 1 0 0 1 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 972.46247 Q86UT6 Q86UT6 885 895 NLRX1 NLR family member X1 yes yes 2 0.0072523 97.965 By MS/MS 4 0 1 1 964330 964330 0 2498 1825 2583 5947 4989 4989 1 90750 0 DLGGFDEDAEPR GHLNRGFHQEVFLGKDLGGFDEDAEPRRSR LGKDLGGFDEDAEPRRSRRKLMVIFSKVDV K D L P R R 1 1 0 3 0 0 2 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 12 0 1319.563 Q9BRK5 Q9BRK5 86 97 SDF4 45 kDa calcium-binding protein yes yes 2 0.00053106 133.89 By MS/MS 6.5 0.5 1 1 2 2519500 2519500 0 2499 2296 2584 5948;5949 4990;4991 4990 1 24509 0 DLGGLPIVAK LGNNAAYAFNRDIIRDLGGLPIVAKILNTR RDIIRDLGGLPIVAKILNTRDPIVKEKALI R D L A K I 1 0 0 1 0 0 0 2 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 981.58588 Q9UH62 Q9UH62 161 170 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 0.00015195 150.4 By MS/MS 7 0 1 1 810610 810610 0 2500 2725 2585 5950 4992 4992 1 12725 0 DLGIFGLYK EITTGPRVSALNVLRDLGIFGLYKGAKACF ALNVLRDLGIFGLYKGAKACFLRDIPFSAI R D L Y K G 0 0 0 1 0 0 0 2 0 1 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1024.5593 O75746 O75746 474 482 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0019756 121.62 By MS/MS 5.5 0.5 1 1 2 1297400 1297400 0 2501 344 2586 5951;5952 4993 4993 1 12594 0 DLGVFIPAPMAQGMR NGPKTINQIRQDAVKDLGVFIPAPMAQGMR DLGVFIPAPMAQGMRSDFFLEGPFMPPRMK K D L M R S 2 1 0 1 0 1 0 2 0 1 1 0 2 1 2 0 0 0 0 1 0 0 15 0 1601.8058 P78344 P78344 333 347 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0076802 95.81 By MS/MS 4.4 0.49 3 2 5 2038000 2038000 0 2502 1219 2587;2588;2589 5953;5954;5955;5956;5957 4994;4995;4996;4997 4997 703;704 4 174960 0 DLHDANTDLIGRHPK SKASLEKAGKSGVKKDLHDANTDLIGRHPK DLHDANTDLIGRHPKQEKRSVFQTINQFLD K D L P K Q 1 1 1 3 0 0 0 1 2 1 2 1 0 0 1 0 1 0 0 0 0 0 15 1 1700.8594 P53985 P53985 225 239 SLC16A1 Monocarboxylate transporter 1 yes yes 3;4 0.0028674 109 By MS/MS 3.58 1.85 2 2 2 2 2 1 1 12 10483000 10483000 0 2503 1038 2590 5958;5959;5960;5961;5962;5963;5964;5965;5966;5967;5968;5969 4998;4999;5000;5001;5002;5003;5004 5004 7 1125000 0 DLHTLDSHVR LLFICGSKEKYRQLRDLHTLDSHVRGIKKL YRQLRDLHTLDSHVRGIKKLLEEQGIFLRA R D L V R G 0 1 0 2 0 0 0 0 2 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1191.5996 Q5T4S7 Q5T4S7 3229 3238 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 0.0079962 95.775 By MS/MS 1.5 0.5 1 1 2 123770 123770 0 2504 1633 2591 5970;5971 5005 5005 1 36354 0 DLIHGAPVGKPAANR VLGEKTSNLRVKTLRDLIHGAPVGKPAANR DLIHGAPVGKPAANRAFVSMVYSEEGAEDR R D L N R A 3 1 1 1 0 0 0 2 1 1 1 1 0 0 2 0 0 0 0 1 0 0 15 1 1514.8318 Q14683 Q14683 63 77 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.018939 77.204 By MS/MS 3 0 1 1 860200 860200 0 2505 1451 2592 5972 5006 5006 1 15739 0 DLIIEQR ELLELASRMENERTKDLIIEQRFHRTIIGQ RMENERTKDLIIEQRFHRTIIGQKGERIRE K D L Q R F 0 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 885.49198 Q00341 Q00341 511 517 HDLBP Vigilin yes yes 2 0.042447 95.352 By MS/MS By matching 3 0 2 1 1 1156300 764130 392120 2506 1260 2593 5973;5974 5007 5007 1 13982 49911 DLILADYGKK TLTDEEWIKVEVQLKDLILADYGKKNNVNV EVQLKDLILADYGKKNNVNVASLTQSEIRD K D L K K N 1 0 0 2 0 0 0 1 0 1 2 2 0 0 0 0 0 0 1 0 0 0 10 1 1134.6285 Q6P2Q9 Q6P2Q9 1985 1994 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.039144 91.087 By MS/MS 2.5 0.5 1 1 2 866060 866060 0 2507 1708 2594 5975;5976 5008 5008 1 238730 0 DLILPTIQK SCAPLLRYLSHSEFKDLILPTIQKSLLRSP SHSEFKDLILPTIQKSLLRSPENVIETISS K D L Q K S 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 0 1 0 0 0 0 0 9 0 1039.6277 Q92616 Q92616 260 268 GCN1L1 Translational activator GCN1 yes yes 2 0.035459 82.241 By MS/MS 2 0 1 1 460710 460710 0 2508 2064 2595 5977 5009 5009 1 155830 0 DLKPENILVTSGGTVK LRGLDFLHANCIVHRDLKPENILVTSGGTV LKPENILVTSGGTVKLADFGLARIYSYQMA R D L V K L 0 0 1 1 0 0 1 2 0 1 2 2 0 0 1 1 2 0 0 2 0 0 16 1 1669.9251 P11802 P11802 140 155 CDK4 Cyclin-dependent kinase 4 yes yes 2;3 0.0025798 153 By MS/MS 8.33 0.471 2 1 3 2869900 2869900 0 2509 584 2596 5978;5979;5980 5010;5011 5011 2 37915 0 DLKPENIVLQDVGGK GSGIRYLHENKIIHRDLKPENIVLQDVGGK DLKPENIVLQDVGGKIIHKIIDLGYAKDVD R D L G K I 0 0 1 2 0 1 1 2 0 1 2 2 0 0 1 0 0 0 0 2 0 0 15 1 1623.8832 O15111 O15111 144 158 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 2 0.00048497 182.37 By MS/MS 4.5 0.5 1 1 2 2591200 2591200 0 2510 160 2597 5981;5982 5012 5012 1 51127 0 DLKPENLLLASK LESVNHIHQHDIVHRDLKPENLLLASKCKG VHRDLKPENLLLASKCKGAAVKLADFGLAI R D L S K C 1 0 1 1 0 0 1 0 0 0 4 2 0 0 1 1 0 0 0 0 0 0 12 1 1339.7711 Q13555;Q9UQM7;Q13557;Q13554 Q13555 136 147 CAMK2G;CAMK2A;CAMK2D;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 2;3 0.0010184 150.09 By MS/MS 6.5 0.5 2 2 4 20288000 20288000 0 2511 1396 2598 5983;5984;5985;5986 5013;5014;5015 5013 3 153080 0 DLKPQNLLIDDK LQGIVFCHSRRVLHRDLKPQNLLIDDKGTI LHRDLKPQNLLIDDKGTIKLADFGLARAFG R D L D K G 0 0 1 3 0 1 0 0 0 1 3 2 0 0 1 0 0 0 0 0 0 0 12 1 1410.7718 P06493 P06493 128 139 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.0047536 96.23 By MS/MS 8 0 1 1 803390 803390 0 2512 496 2599 5987 5016 5016 1 10143 0 DLKPQNLLIDDKGTIK LQGIVFCHSRRVLHRDLKPQNLLIDDKGTI LKPQNLLIDDKGTIKLADFGLARAFGIPIR R D L I K L 0 0 1 3 0 1 0 1 0 2 3 3 0 0 1 0 1 0 0 0 0 0 16 2 1810.02 P06493 P06493 128 143 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.020868 97.579 By MS/MS 8 0 2 2 9391400 9391400 0 2513 496 2600 5988;5989 5017;5018 5018 1 118570 0 DLKPQNLLINTEGAIK LQGLAFCHSHRVLHRDLKPQNLLINTEGAI LKPQNLLINTEGAIKLADFGLARAFGVPVR R D L I K L 1 0 2 1 0 1 1 1 0 2 3 2 0 0 1 0 1 0 0 0 0 0 16 1 1765.9938 P24941 P24941 127 142 CDK2 Cyclin-dependent kinase 2 yes yes 3 0.0038425 98.421 By MS/MS 8 0 1 1 258220 258220 0 2514 718 2601 5990 5019 5019 1 3260.1 0 DLLDLLVEAK LATSFFNERNINITKDLLDLLVEAKQEVPS INITKDLLDLLVEAKQEVPSWLENMAYEHH K D L A K Q 1 0 0 2 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 10 0 1127.6438 O00571;O15523 O00571 555 564 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 2.497E-05 168.26 By MS/MS 6 1.41 1 1 1 1 1 5 5561200 5561200 0 2515 116 2602 5991;5992;5993;5994;5995 5020;5021;5022;5023;5024 5022 5 59136 0 DLLEVADVLEK LVEEAKLYGIQAFCKDLLEVADVLEKATQC AFCKDLLEVADVLEKATQCVPKEEIKDDNP K D L E K A 1 0 0 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1242.6707 Q9HAV7 Q9HAV7 110 120 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.00017578 145.25 By MS/MS 8.5 0.5 1 1 2 563370 563370 0 2516 2496 2603 5996;5997 5025;5026 5025 2 10449 0 DLLFQALGR ______________________________ TVSVKRDLLFQALGRTYTDEEFDELCFEFG R D L G R T 1 1 0 1 0 1 0 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1031.5764 Q9NSD9 Q9NSD9 9 17 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.00058417 144.12 By MS/MS 5 0 1 1 861800 861800 0 2517 2569 2604 5998 5027 5027 1 8643.4 0 DLLGIIK ETSESQDSEKENTKKDLLGIIKGMKVELST SEKENTKKDLLGIIKGMKVELSTVNVRTTK K D L I K G 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 0 0 0 7 0 770.49019 Q92665 Q92665 98 104 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.015102 122.15 By MS/MS 7 0 1 1 913670 913670 0 2518 2067 2605 5999 5028 5028 1 14343 0 DLLGLHNMK AVQFTNRNQYCYGSRDLLGLHNMKRRQLAR YCYGSRDLLGLHNMKRRQLARLGYRVVELS R D L M K R 0 0 1 1 0 0 0 1 1 0 3 1 1 0 0 0 0 0 0 0 0 0 9 0 1039.5485 Q7L8L6 Q7L8L6 713 721 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.015228 75.043 By MS/MS 5 0 1 1 458440 458440 0 2519 1771 2606 6000 5029 5029 1 4598 0 DLLHPSLEEEK ______________________________ PLARDLLHPSLEEEKKKHKKKRLVQSPNSY R D L E K K 0 0 0 1 0 0 3 0 1 0 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1308.6561 Q71UM5 Q71UM5 6 16 RPS27L 40S ribosomal protein S27-like yes yes 2 0.00063292 128.91 By MS/MS 10 0 1 1 441590 441590 0 2520 1752 2607 6001 5030 5030 1 23800 0 DLLHPSPEEEK ______________________________ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSY K D L E K R 0 0 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 11 0 1292.6248 P42677 P42677 6 16 RPS27 40S ribosomal protein S27 yes yes 2 0.0085984 94.409 By MS/MS 10 0 1 1 1715800 1715800 0 2521 882 2608 6002 5031 5031 1 92474 0 DLLHPSPEEEKR ______________________________ LAKDLLHPSPEEEKRKHKKKRLVQSPNSYF K D L K R K 0 1 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 12 1 1448.726 P42677 P42677 6 17 RPS27 40S ribosomal protein S27 yes yes 3 0.00027849 158.08 By MS/MS 10 0 1 1 1451100 1451100 0 2522 882 2609 6003 5032 5032 1 78211 0 DLLHPSPEEEKRK ______________________________ AKDLLHPSPEEEKRKHKKKRLVQSPNSYFM K D L R K H 0 1 0 1 0 0 3 0 1 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1576.8209 P42677 P42677 6 18 RPS27 40S ribosomal protein S27 yes yes 3 0.028226 96.334 By MS/MS 10 0 1 1 7331800 7331800 0 2523 882 2610 6004 5033 5033 1 395160 0 DLLIQQTMR NQQSRDLSLEVDRDRDLLIQQTMRQLNNHF EVDRDRDLLIQQTMRQLNNHFGRRCATTPM R D L M R Q 0 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1116.5961 O95071 O95071 2249 2257 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.015066 90.15 By MS/MS 2 0 1 1 134430 134430 0 2524 384 2611 6005 5034 5034 1 45469 0 DLLKEFPQPK CVNPTPGGTISRASRDLLKEFPQPKNLLNS SRASRDLLKEFPQPKNLLNSVIGRALGISH R D L P K N 0 0 0 1 0 1 1 0 0 0 2 2 0 1 2 0 0 0 0 0 0 0 10 1 1213.6707 Q7L2E3 Q7L2E3 45 54 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2;3 0.0036675 128.6 By MS/MS 3 0 2 2 915860 915860 0 2525 1761 2612 6006;6007 5035;5036 5035 2 16758 0 DLLLFLAER LGYQNFLYPSEPDLRDLLLFLAERLPTDAS SEPDLRDLLLFLAERLPTDASEDADQPAGD R D L E R L 1 1 0 1 0 0 1 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 9 0 1088.623 O60826 O60826 99 107 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.00081166 137.14 By MS/MS 5 0 1 1 210780 210780 0 2526 280 2613 6008 5037 5037 1 2114 0 DLLLHDQCQITTLR LQLNSLGPEACKDLRDLLLHDQCQITTLRL RDLLLHDQCQITTLRLSNNPLTAAGVAVLM R D L L R L 0 1 0 2 1 2 0 0 1 1 4 0 0 0 0 0 2 0 0 0 0 0 14 0 1724.888 Q86UT6 Q86UT6 772 785 NLRX1 NLR family member X1 yes yes 3 0.00041908 157.56 By MS/MS 4 0 1 1 738920 738920 0 2527 1825 2614 6009 5038 5038 1 69538 0 DLLLNTMSQEEK RLGLIEWLENTVTLKDLLLNTMSQEEKAAY TLKDLLLNTMSQEEKAAYLSDPRAPPCEYK K D L E K A 0 0 1 1 0 1 2 0 0 0 3 1 1 0 0 1 1 0 0 0 0 0 12 0 1419.6915 P78527 P78527 3814 3825 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.0602E-18 262.07 By MS/MS 3 1.73 2 2 1 1 1 1 8 4431600 4431600 0 2528 1225 2615;2616 6010;6011;6012;6013;6014;6015;6016;6017 5039;5040;5041 5041 719 3 358480 0 DLLQNLLK TSLVNVVPKLNATGRDLLQNLLKCNPVQRI KLNATGRDLLQNLLKCNPVQRISAEEALQH R D L L K C 0 0 1 1 0 1 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 8 0 955.57023 Q00535 Q00535 261 268 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.0053896 123.69 By MS/MS 8 0 1 1 462650 462650 0 2529 1261 2617 6018 5042 5042 1 5841 0 DLLQSSYNK ILHIPDAHLWVKNCRDLLQSSYNKQRFDQP WVKNCRDLLQSSYNKQRFDQPLEASTWLKN R D L N K Q 0 0 1 1 0 1 0 0 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 1066.5295 P51398 P51398 167 175 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0011886 131.62 By MS/MS 7 0 1 1 7088100 7088100 0 2530 993 2618 6019 5043 5043 1 111270 0 DLMACAQTGSGK TPVQKHAIPIIKEKRDLMACAQTGSGKTAA EKRDLMACAQTGSGKTAAFLLPILSQIYSD R D L G K T 2 0 0 1 1 1 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 12 0 1237.5431 O00571;O15523;Q9NQI0 O00571 219 230 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.00016645 152.67 By MS/MS 5 0 2 2 3418700 3418700 0 2531 116 2619;2620 6020;6021 5044;5045 5045 70 2 34288 0 DLNCVPEIADTLGAVAK MAVGGAGGSRVSSGRDLNCVPEIADTLGAV NCVPEIADTLGAVAKQGFDFLCMPVFHPRF R D L A K Q 3 0 1 2 1 0 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 17 0 1784.8978 O14744 O14744 19 35 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2;3 6.1978E-17 211.82 By MS/MS By MS/MS 5.4 0.49 3 2 3 2 2743700 2392900 350760 2532 137 2621 6022;6023;6024;6025;6026 5046;5047;5048;5049;5050 5046 5 21209 294560 DLNFEVR DHVPLATPNGDVLIRDLNFEVRSGANVLIC PNGDVLIRDLNFEVRSGANVLICGPNGCGK R D L V R S 0 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 891.44503 P28288 P28288 458 464 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.014876 122.74 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 6892200 6892200 0 2533 752 2622 6027;6028;6029;6030;6031;6032 5051;5052 5051 2 217120 0 DLNQLFQQDSSSR QMTIQALQDELRIQRDLNQLFQQDSSSRTG QRDLNQLFQQDSSSRTGEPCVAELTEENFQ R D L S R T 0 1 1 2 0 3 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 13 0 1536.7168 Q8IUD2 Q8IUD2 241 253 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 2 1.2719E-07 209.67 By MS/MS 3 0 1 1 277930 277930 0 2534 1858 2623 6033 5053 5053 1 5085.4 0 DLNSDMDSILASLK SGKGFYIYQEGVKRKDLNSDMDSILASLKL KDLNSDMDSILASLKLPPKSEVSSDEDIQF K D L L K L 1 0 1 3 0 0 0 0 0 1 3 1 1 0 0 3 0 0 0 0 0 0 14 0 1520.7392 P40939 P40939 647 660 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 2.3883E-05 195.72 By MS/MS 5 0 1 1 252080 252080 0 2535 865 2624 6034 5054 5054 447 1 2528.3 0 DLNSVLADNLK RLSTTVNSRAFNPGRDLNSVLADNLKSNPG NPGRDLNSVLADNLKSNPGIKWQYFSSEEG R D L L K S 1 0 2 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1200.635 Q5VU97 Q5VU97 169 179 CACHD1 VWFA and cache domain-containing protein 1 yes yes 2 0.00027565 136.5 By MS/MS 3 0 1 1 71967 71967 0 2536 1650 2625 6035 5055;5056 5055 2 1316.8 0 DLNSYLEDK VDGHSSKNDIHTLLKDLNSYLEDKVYLTGY IHTLLKDLNSYLEDKVYLTGYNFTLADILL K D L D K V 0 0 1 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1095.5084 O43324 O43324 97 105 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.0022579 118.03 By MS/MS 9.5 0.5 1 1 2 1584500 1584500 0 2537 204 2626 6036;6037 5057;5058 5058 2 42435 0 DLPDEIPLPLVIGTK RLLQQRKVADVSQFKDLPDEIPLPLVIGTK DLPDEIPLPLVIGTKVTARLRGVHDGLFTG K D L T K V 0 0 0 2 0 0 1 1 0 2 3 1 0 0 3 0 1 0 0 1 0 0 15 0 1618.9182 Q5TKA1 Q5TKA1 211 225 LIN9 Protein lin-9 homolog yes yes 2 0.0032154 108.56 By MS/MS 6 0 1 1 207370 207370 0 2538 1643 2627 6038 5059;5060 5060 2 1425.5 0 DLPDVQELITQVR NEVNSDAGAFKNSLKDLPDVQELITQVRSE LKDLPDVQELITQVRSEKCSLQAAAILDAN K D L V R S 0 1 0 2 0 2 1 0 0 1 2 0 0 0 1 0 1 0 0 2 0 0 13 0 1524.8148 Q9UHB9 Q9UHB9 509 521 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00082154 129.34 By MS/MS 5 0 1 1 305000 305000 0 2539 2728 2628 6039 5061;5062 5062 2 3059 0 DLPELALDTPR MSTTDVEKSFDKLLKDLPELALDTPRAPQL KLLKDLPELALDTPRAPQLVGQFIARAVGD K D L P R A 1 1 0 2 0 0 1 0 0 0 3 0 0 0 2 0 1 0 0 0 0 0 11 0 1238.6507 Q53EL6 Q53EL6 246 256 PDCD4 Programmed cell death protein 4 yes yes 2 0.001229 117.02 By MS/MS 6 0 1 1 932230 932230 0 2540 1585 2629 6040 5063 5063 1 6408.3 0 DLPFETLEVEAK NLRSFTKDAHALIYKDLPFETLEVEAKVAL IYKDLPFETLEVEAKVALEIFQHSKYKVDF K D L A K V 1 0 0 1 0 0 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 12 0 1389.7028 Q9NYK5 Q9NYK5 213 224 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 5.9537E-06 184.71 By MS/MS 8 0.816 1 1 1 3 2376400 2376400 0 2541 2635 2630 6041;6042;6043 5064;5065 5065 2 33349 0 DLPGALDEKELIEK PQLQGIPVLVLGNKRDLPGALDEKELIEKM RDLPGALDEKELIEKMNLSAIQDREICCYS R D L E K M 1 0 0 2 0 0 3 1 0 1 3 2 0 0 1 0 0 0 0 0 0 0 14 1 1568.8298 Q96BM9 Q96BM9 133 146 ARL8A ADP-ribosylation factor-like protein 8A yes yes 2 0.043363 93.348 By MS/MS 9 0 1 1 668940 668940 0 2542 2114 2631 6044 5066 5066 1 13165 0 DLPLLLFR GLNGAVFRPEVPLRRDLPLLLFRTQTSDPA PEVPLRRDLPLLLFRTQTSDPAMLPTMIGL R D L F R T 0 1 0 1 0 0 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 8 0 985.59605 O43175 O43175 462 469 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.0018107 145.04 By MS/MS 7.29 1.67 1 2 1 1 1 1 7 21955000 21955000 0 2543 195 2632 6045;6046;6047;6048;6049;6050;6051 5067;5068;5069;5070;5071;5072;5073 5072 7 163770 0 DLPNALDEK PQLQGIPVLVLGNKRDLPNALDEKQLIEKM VLGNKRDLPNALDEKQLIEKMNLSAIQDRE R D L E K Q 1 0 1 2 0 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 9 0 1013.5029 Q9NVJ2 Q9NVJ2 133 141 ARL8B ADP-ribosylation factor-like protein 8B yes yes 2 0.015004 82.645 By MS/MS 9 0 1 1 2226000 2226000 0 2544 2599 2633 6052 5074 5074 1 43809 0 DLPNALDEKQLIEK PQLQGIPVLVLGNKRDLPNALDEKQLIEKM RDLPNALDEKQLIEKMNLSAIQDREICCYS R D L E K M 1 0 1 2 0 1 2 0 0 1 3 2 0 0 1 0 0 0 0 0 0 0 14 1 1624.8672 Q9NVJ2 Q9NVJ2 133 146 ARL8B ADP-ribosylation factor-like protein 8B yes yes 2 0.00369 129.76 By MS/MS 9 0 1 1 713380 713380 0 2545 2599 2634 6053 5075 5075 1 14039 0 DLPQDPVELAMFGLR WFPRFMNVNPFPVPRDLPQDPVELAMFGLR DLPQDPVELAMFGLRHMEPDLSARVTIYQV R D L L R H 1 1 0 2 0 1 1 1 0 0 3 0 1 1 2 0 0 0 0 1 0 0 15 0 1699.8603 Q9BQ95 Q9BQ95 218 232 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 2 0.0055415 101.39 By MS/MS 6.5 0.5 1 1 2 413410 413410 0 2546 2285 2635 6054;6055 5076 5076 1064 1 3534.8 0 DLPSADSVQYR HFFHSLMLYHEHLRKDLPSADSVQYRHLPS HLRKDLPSADSVQYRHLPSRGITQKEQDGL K D L Y R H 1 1 0 2 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1249.5939 Q92621 Q92621 572 582 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.015236 88.134 By MS/MS 2 0 1 1 637770 637770 0 2547 2065 2636 6056 5077 5077 1 215720 0 DLPSAGEEILEVESEPR DEAYPSMPVGITGWRDLPSAGEEILEVESE PSAGEEILEVESEPRAREVVDWRKYEQEQE R D L P R A 1 1 0 1 0 0 5 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 17 0 1868.9004 P46199 P46199 423 439 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2;3 8.6658E-07 219.35 By MS/MS 5.33 0.471 2 1 3 2838700 2838700 0 2548 910 2637 6057;6058;6059 5078;5079;5080 5078 3 26566 0 DLPVSEQQER YYKDALRFLGCVDIKDLPVSEQQERAFTLG CVDIKDLPVSEQQERAFTLGLAGLLGEGVF K D L E R A 0 1 0 1 0 2 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1199.5782 Q9UNM6 Q9UNM6 187 196 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.00072654 128.91 By MS/MS 7 0 1 1 2278200 2278200 0 2549 2791 2638 6060 5081;5082 5082 2 35764 0 DLQAGLAR PLFLPPTTVPPECYRDLQAGLARILGSKLS VPPECYRDLQAGLARILGSKLSSWQRNPAL R D L A R I 2 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 842.46102 Q9UBB6 Q9UBB6 260 267 NCDN Neurochondrin yes yes 2 0.025855 93.143 By MS/MS 5 0 1 1 797870 797870 0 2550 2694 2639 6061 5083 5083 1 8002.3 0 DLQANVEHLVQK GADAAYIFEEPFTIRDLQANVEHLVQKMKT TIRDLQANVEHLVQKMKTTVKRGLVLRNEK R D L Q K M 1 0 1 1 0 2 1 0 1 0 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1392.7361 P08237 P08237 604 615 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.00047282 134.98 By MS/MS 5 0 1 1 832580 832580 0 2551 520 2640 6062 5084 5084 1 8350.3 0 DLQDELAGNSEQR QEQIKQRTKLELKAKDLQDELAGNSEQRKR AKDLQDELAGNSEQRKRLLKERQKLLEKIE K D L Q R K 1 1 1 2 0 2 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1473.6696 Q9UQE7 Q9UQE7 311 323 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 3.4581E-17 299.42 By MS/MS 2.5 0.5 1 1 2 1911000 1911000 0 2552 2807 2641 6063;6064 5085 5085 1 87978 0 DLQGRDEQSEEK RLEVNLQAMKAQFERDLQGRDEQSEEKKKQ FERDLQGRDEQSEEKKKQLVRQVREMEAEL R D L E K K 0 1 0 2 0 2 3 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 12 1 1432.643 P35579 P35579 1572 1583 MYH9 Myosin-9 yes yes 2 0.0011996 145.14 By MS/MS 2 0 1 1 274660 274660 0 2553 824 2642 6065 5086 5086 1 92900 0 DLQHPNEFIR RLLHEMILVCDAYRKDLQHPNEFIRGSTLR DAYRKDLQHPNEFIRGSTLRFLCKLKEAEL K D L I R G 0 1 1 1 0 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1267.6309 P53618 P53618 108 117 COPB1 Coatomer subunit beta yes yes 2;3 0.00045132 134.23 By MS/MS 4.2 0.748 1 2 2 5 31279000 31279000 0 2554 1033 2643 6066;6067;6068;6069;6070 5087;5088;5089;5090 5087 4 2498200 0 DLQLLQGSK QVLDLLKTSVVKSFKDLQLLQGSKFLQNLV VVKSFKDLQLLQGSKFLQNLVPHRSYVSTM K D L S K F 0 0 0 1 0 2 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1000.5553 Q9NVI1 Q9NVI1 340 348 FANCI Fanconi anemia group I protein yes yes 2 0.0025078 114.86 By MS/MS 3 0 1 1 307410 307410 0 2555 2597 2644 6071 5091 5091 1 5624.8 0 DLQMVNISLR IRARPRKISSPTGSKDLQMVNISLRVLSRP PTGSKDLQMVNISLRVLSRPNAQELPSMYQ K D L L R V 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1187.6332 Q99623 Q99623 98 107 PHB2 Prohibitin-2 yes yes 2 1.1843E-08 196.79 By MS/MS By MS/MS 7.71 0.7 3 3 1 5 2 25613000 25453000 159610 2556 2254 2645;2646 6072;6073;6074;6075;6076;6077;6078 5092;5093;5094;5095;5096;5097;5098 5092 1047 7 363420 256880 DLQNFLK PDTLNQGEFKELVRKDLQNFLKKENKNEKV EFKELVRKDLQNFLKKENKNEKVIEHIMED K D L L K K 0 0 1 1 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 876.47052 P06702 P06702 44 50 S100A9 Protein S100-A9 yes yes 2 0.031909 103.28 By MS/MS 10 0 1 1 117940 117940 0 2557 498 2647 6079 5099 5099 1 6356.4 0 DLQNVNITLR CRSRPRNVPVITGSKDLQNVNITLRILFRP ITGSKDLQNVNITLRILFRPVASQLPRIFT K D L L R I 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1184.6513 P35232 P35232 84 93 PHB Prohibitin yes yes 2 2.4295E-08 200.71 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 90883000 90470000 413570 2558 814 2648 6080;6081;6082;6083 5100;5101 5101 2 1182800 558100 DLQQQLVDAK YELREEHIDKVFKHKDLQQQLVDAKLQQAQ VFKHKDLQQQLVDAKLQQAQEMLKEAEERH K D L A K L 1 0 0 2 0 3 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1156.6088 P40222 P40222 331 340 TXLNA Alpha-taxilin yes yes 2 0.0010054 123.51 By MS/MS 5 0 1 1 1284800 1284800 0 2559 857 2649 6084 5102 5102 1 12886 0 DLQQYQSQAK LPLAASMQEDEQSGRDLQQYQSQAKQLFRK EQSGRDLQQYQSQAKQLFRKLNEQSPTRCT R D L A K Q 1 0 0 1 0 4 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1207.5833 O75396 O75396 29 38 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 1.7179E-05 169.76 By MS/MS 9 0.816 1 1 1 3 7451000 7451000 0 2560 323 2650 6085;6086;6087 5103;5104;5105 5103 3 127980 0 DLQSNVEHLTEK GADAAYIFEEPFDIRDLQSNVEHLTEKMKT DIRDLQSNVEHLTEKMKTTIQRGLVLRNES R D L E K M 0 0 1 1 0 1 2 0 1 0 2 1 0 0 0 1 1 0 0 1 0 0 12 0 1411.6943 Q01813 Q01813 614 625 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.0037921 107.09 By MS/MS 5 0 1 1 904300 904300 0 2561 1271 2651 6088 5106 5106 1 9069.6 0 DLRPAGSK VICQLGNFSIHMALRDLRPAGSKTRKIPYP SIHMALRDLRPAGSKTRKIPYPTKNPFTWL R D L S K T 1 1 0 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 8 1 842.46102 Q9NZ01 Q9NZ01 217 224 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.044996 111.74 By MS/MS 8 0 1 1 2059000 2059000 0 2562 2642 2652 6089 5107 5107 1 25995 0 DLSDLVSEMEMMK VTVAVKMLKDDATDKDLSDLVSEMEMMKMI DKDLSDLVSEMEMMKMIGKHKNIINLLGAC K D L M K M 0 0 0 2 0 0 2 0 0 0 2 1 3 0 0 2 0 0 0 1 0 0 13 0 1526.6667 P22607;P21802 P22607 518 530 FGFR3;FGFR2 Fibroblast growth factor receptor 3;Fibroblast growth factor receptor 2 yes no 3 0.047017 42.095 By MS/MS 8 0 1 1 433760 433760 0 2563 682 2653 6090 5108 5108 341;342;343 1 5476.2 0 DLSHIGDAVVISCAK CVVKMPSGEFARICRDLSHIGDAVVISCAK DLSHIGDAVVISCAKDGVKFSASGELGNGN R D L A K D 2 0 0 2 1 0 0 1 1 2 1 1 0 0 0 2 0 0 0 2 0 0 15 0 1583.7977 P12004 P12004 150 164 PCNA Proliferating cell nuclear antigen yes yes 2 0.00049745 147.33 By MS/MS 7.5 0.5 1 1 2 1287000 1287000 0 2564 587 2654 6091;6092 5109 5109 1 17559 0 DLSIEEYIR ELGDVQALSLWQKFRDLSIEEYIRVYKRLG LWQKFRDLSIEEYIRVYKRLGVYFDEYSGE R D L I R V 0 1 0 1 0 0 2 0 0 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1136.5714 Q5T160 Q5T160 246 254 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.00010599 161.02 By MS/MS 6 0 1 1 1153200 1153200 0 2565 1627 2655 6093 5110 5110 1 7927.3 0 DLSLDDFK APYFKGTAVVNGEFKDLSLDDFKGKYLVLF VVNGEFKDLSLDDFKGKYLVLFFYPLDFTF K D L F K G 0 0 0 3 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 951.45493 P30048 P30048 84 91 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.0051426 124.83 By MS/MS 8.5 0.5 1 1 2 1064500 1064500 0 2566 764 2656 6094;6095 5111 5111 1 18326 0 DLSLDDFKGK APYFKGTAVVNGEFKDLSLDDFKGKYLVLF NGEFKDLSLDDFKGKYLVLFFYPLDFTFVC K D L G K Y 0 0 0 3 0 0 0 1 0 0 2 2 0 1 0 1 0 0 0 0 0 0 10 1 1136.5714 P30048 P30048 84 93 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.0015813 138.98 By MS/MS 9 0 1 1 1539300 1539300 0 2567 764 2657 6096 5112 5112 1 30293 0 DLSLEVDRDR KFRREMEKLRNQQSRDLSLEVDRDRDLLIQ NQQSRDLSLEVDRDRDLLIQQTMRQLNNHF R D L D R D 0 2 0 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 1 1216.6048 O95071 O95071 2239 2248 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.016161 109.48 By MS/MS 1.5 0.5 1 1 2 777770 777770 0 2568 384 2658 6097;6098 5113 5113 1 238850 0 DLSLLQIQMR RNALKWDKDNLQILRDLSLLQIQMRDLEGY LQILRDLSLLQIQMRDLEGYRETRYQLLQL R D L M R D 0 1 0 1 0 2 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 10 0 1215.6645 Q9BXJ9;Q6N069 Q9BXJ9 119 128 NAA15;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 2 1.1595E-07 190.62 By MS/MS 4 0 1 1 165200 165200 0 2569 2357 2659 6099 5114 5114 1 15546 0 DLSSEELAAFQK SIIGSARSLGIRVVKDLSSEELAAFQKERA VVKDLSSEELAAFQKERAIFLAAQKEADLA K D L Q K E 2 0 0 1 0 1 2 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 12 0 1336.6511 Q9Y3B7 Q9Y3B7 158 169 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 4.66E-25 282.72 By MS/MS 9 0 1 1 4177300 4177300 0 2570 2866 2660 6100 5115 5115 1 82210 0 DLSSEELAAFQKER SIIGSARSLGIRVVKDLSSEELAAFQKERA KDLSSEELAAFQKERAIFLAAQKEADLAAQ K D L E R A 2 1 0 1 0 1 3 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 14 1 1621.7948 Q9Y3B7 Q9Y3B7 158 171 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 0.00055754 173.76 By MS/MS 9 0 3 3 3620400 3620400 0 2571 2866 2661 6101;6102;6103 5116;5117;5118 5118 3 71250 0 DLSTVEALQNLK CPNLTYLNLSGNKIKDLSTVEALQNLKNLK KIKDLSTVEALQNLKNLKSLDLFNCEITNL K D L L K N 1 0 1 1 0 1 1 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 12 0 1329.714 Q9BTT0 Q9BTT0 102 113 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 2 5.2413E-05 166.69 By MS/MS 9 0.816 1 1 1 3 3302900 3302900 0 2572 2317 2662 6104;6105;6106 5119;5120;5121;5122 5121 4 48209 0 DLTDYLMK YALPHAILRLDLAGRDLTDYLMKILTERGY RLDLAGRDLTDYLMKILTERGYSFTTTAER R D L M K I 0 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 0 0 8 0 997.47903 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P63261 184 191 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2 0.0052153 123.69 By MS/MS By matching 7 0 2 1 1 4461100 4315500 145620 2573 1095;1203;1594 2663 6107;6108 5123 5123 615 1 67746 262260 DLTEALDEDADPTK EEEVAKEQLTDADTKDLTEALDEDADPTKS KDLTEALDEDADPTKSALSAVASLAAAWPQ K D L T K S 2 0 0 4 0 0 2 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 14 0 1531.689 Q9NRL2 Q9NRL2 504 517 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 2 0.0019085 118.77 By MS/MS 2 0 1 1 174750 174750 0 2574 2554 2664 6109 5124 5124 0 59109 0 DLTEYLK KFASHCLMNHPDLAKDLTEYLKVRSHDPEE MNHPDLAKDLTEYLKVRSHDPEEAIRHDVI K D L L K V 0 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 7 0 880.4542 Q29RF7;Q9NTI5 Q29RF7 360 366 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.024338 108.98 By MS/MS 3 0 1 1 252550 252550 0 2575 1565 2665 6110 5125 5125 1 4620.9 0 DLTEYLSR GKMFIGGLSWDTSKKDLTEYLSRFGEVVDC SWDTSKKDLTEYLSRFGEVVDCTIKTDPVT K D L S R F 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 8 0 995.49238 O14979 O14979 163 170 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 0.00043109 147.19 By MS/MS 7 0 1 1 0 0 0 2576 152 2666 6111 5126 5126 1 0 0 DLTIQKADEVVWVR IQSQEKPDRVLVRVRDLTIQKADEVVWVRA RDLTIQKADEVVWVRARVHTSRAKGKQCFL R D L V R A 1 1 0 2 0 1 1 0 0 1 1 1 0 0 0 0 1 1 0 3 0 0 14 1 1670.8992 P14868 P14868 50 63 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2;3 0.0017868 141.13 By MS/MS 6 0 2 2 2857400 2857400 0 2577 620 2667 6112;6113 5127;5128 5128 1 19643 0 DLTKPVVTISDEPDILYK MKWVQFSNLHVDVPKDLTKPVVTISDEPDI KPVVTISDEPDILYKRLSVLVKGHDKAVLD K D L Y K R 0 0 0 3 0 0 1 0 0 2 2 2 0 0 2 1 2 0 1 2 0 0 18 1 2045.0932 P82664 P82664 57 74 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 3 0.0026947 96.435 By MS/MS 9 0 1 1 138020 138020 0 2578 1231 2668 6114 5129 5129 1 2716.3 0 DLTLEENQVK EFEERMEEESQSQGRDLTLEENQVKKYHRL QSQGRDLTLEENQVKKYHRLKEEASKRAAT R D L V K K 0 0 1 1 0 1 2 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1187.6034 Q14683 Q14683 364 373 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00058636 131.62 By MS/MS 3 0 1 1 1202700 1202700 0 2579 1451 2669 6115 5130 5130 1 22006 0 DLTLEENQVKK EFEERMEEESQSQGRDLTLEENQVKKYHRL SQGRDLTLEENQVKKYHRLKEEASKRAATL R D L K K Y 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1315.6983 Q14683 Q14683 364 374 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00098299 128.6 By MS/MS 3 0 1 1 994680 994680 0 2580 1451 2670 6116 5131 5131 1 18200 0 DLTTAGAVTQCYR YDSRSGTHNMYREYRDLTTAGAVTQCYRDM YRDLTTAGAVTQCYRDMGARHRARAHSIQI R D L Y R D 2 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 3 0 1 1 0 0 13 0 1454.6824 Q02543 Q02543 99 111 RPL18A 60S ribosomal protein L18a yes yes 2 1.2719E-07 220.82 By MS/MS 9 0 1 1 5727300 5727300 0 2581 1278 2671 6117 5132 5132 1 112710 0 DLVAQAPLKPK KIHPLVRLPLATIVKDLVAQAPLKPKTPRG TIVKDLVAQAPLKPKTPRGTKTPINRNQLS K D L P K T 2 0 0 1 0 1 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 0 11 1 1178.7023 O94776 O94776 523 533 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.006397 115.71 By MS/MS 5.5 0.5 1 1 2 4199300 4199300 0 2582 365 2672 6118;6119 5133 5133 1 40332 0 DLVDDFRIR LPTASRKLQFLELQKDLVDDFRIRLTQVMK FLELQKDLVDDFRIRLTQVMKEETRASLGF K D L I R L 0 2 0 3 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 9 1 1147.5986 Q6NUQ1 Q6NUQ1 511 519 RINT1 RAD50-interacting protein 1 yes yes 2 0.012145 115.49 By MS/MS 5 0 1 1 542210 542210 0 2583 1688 2673 6120 5134 5134 1 5438.1 0 DLVEVADILEK CVEDAKIFGIQSFCKDLVEVADILEKTTEC SFCKDLVEVADILEKTTECISEESEPEDQK K D L E K T 1 0 0 2 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1242.6707 Q8TAA5 Q8TAA5 112 122 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 2.3752E-05 160.36 By MS/MS 8.5 0.5 1 1 2 293150 293150 0 2584 1973 2674 6121;6122 5135;5136 5136 2 4760.6 0 DLVSFPLSPAVR ______________________________ MQRDLVSFPLSPAVRVKLVSAGFQTAEELL R D L V R V 1 1 0 1 0 0 0 0 0 0 2 0 0 1 2 2 0 0 0 2 0 0 12 0 1299.7187 O43502 O43502 13 24 RAD51C DNA repair protein RAD51 homolog 3 yes yes 2 0.0011913 121.6 By MS/MS 7 0 1 1 214870 214870 0 2585 215 2675 6123 5137 5137 1 3373.1 0 DLYEDELVPLFEK QPGIGTEVFVGKIPRDLYEDELVPLFEKAG PRDLYEDELVPLFEKAGPIWDLRLMMDPLS R D L E K A 0 0 0 2 0 0 3 0 0 0 3 1 0 1 1 0 0 0 1 1 0 0 13 0 1608.7923 O43390 O43390 175 187 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 2 0.0013698 119.45 By MS/MS 5.5 0.5 1 1 2 185540 185540 0 2586 205 2676 6124;6125 5138;5139 5139 2 1592.4 0 DLYVNIQPVQEPK DMAAAAVRCIRKEIRDLYVNIQPVQEPKDQ IRDLYVNIQPVQEPKDQAFGNGNGIIIIAE R D L P K D 0 0 1 1 0 2 1 0 0 1 1 1 0 0 2 0 0 0 1 2 0 0 13 0 1541.809 O00442 O00442 224 236 RTCA RNA 3-terminal phosphate cyclase yes yes 2 0.00012177 188.91 By MS/MS 7 0 1 1 1092500 1092500 0 2587 106 2677 6126 5140 5140 1 17150 0 DMAEMQRVWKEK QEITSLRMKLHQQERDMAEMQRVWKEKFEQ QERDMAEMQRVWKEKFEQAEKRKLQETKEL R D M E K F 1 1 0 1 0 1 2 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 12 2 1549.7381 Q15058 Q15058 761 772 KIF14 Kinesin-like protein KIF14 yes yes 2 0.0076319 140.83 By MS/MS By MS/MS 4.67 2.94 2 1 2 2 1 1 5 4 38817000 25759000 13058000 2588 1486 2678 6127;6128;6129;6130;6131;6132;6133;6134;6135 5141;5142;5143;5144 5142 868 2 1922700 11976000 DMDATSELK AVTCYGIVHIAGEFKDMDATSELKNKTFDT IAGEFKDMDATSELKNKTFDTLRNHPSFYV K D M L K N 1 0 0 2 0 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 9 0 1008.4434 Q8N4V1 Q8N4V1 69 77 MMGT1 Membrane magnesium transporter 1 yes yes 2 0.01248 95.358 By MS/MS 10 0 1 1 144290 144290 0 2589 1919 2679 6136 5145 5145 961 1 7776.4 0 DMIHIADTK GEFQSASEVDFYIDKDMIHIADTKVARRYG DFYIDKDMIHIADTKVARRYGDFFIRQIHK K D M T K V 1 0 0 2 0 0 0 0 1 2 0 1 1 0 0 0 1 0 0 0 0 0 9 0 1042.5117 Q9Y262 Q9Y262 526 534 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0014637 128.12 By MS/MS 5 0 1 1 1377700 1377700 0 2590 2814 2680 6137 5146 5146 1 13818 0 DMIILPEMVGSMVGVYNGK APPMEKPEVVKTHLRDMIILPEMVGSMVGV LPEMVGSMVGVYNGKTFNQVEIKPEMIGHY R D M G K T 0 0 1 1 0 0 1 3 0 2 1 1 3 0 1 1 0 0 1 3 0 0 19 0 2052.0094 P62841 P62841 82 100 RPS15 40S ribosomal protein S15 yes yes 2 2.6164E-05 169.79 By MS/MS 8.5 0.5 1 1 2 518480 518480 0 2591 1174 2681 6138;6139 5147 5147 674;675;676 1 8656.6 0 DMLEAGILDTYLGK KNVGLDIEAEVPAVKDMLEAGILDTYLGKY KDMLEAGILDTYLGKYWAIKLATNAAVTVL K D M G K Y 1 0 0 2 0 0 1 2 0 1 3 1 1 0 0 0 1 0 1 0 0 0 14 0 1537.7698 P50990 P50990 491 504 CCT8 T-complex protein 1 subunit theta yes yes 2 3.8638E-05 191.33 By MS/MS 6 0 1 1 2921600 2921600 0 2592 984 2682 6140 5148 5148 1 20084 0 DMTLPPETNVILTK EKVALSSETEVALARDMTLPPETNVILTKD RDMTLPPETNVILTKDKALPLEAEVAPVKD R D M T K D 0 0 1 1 0 0 1 0 0 1 2 1 1 0 2 0 3 0 0 1 0 0 14 0 1570.8276 P27816 P27816 449 462 MAP4 Microtubule-associated protein 4 yes yes 2 0.0039757 106.49 By MS/MS 2 0 1 1 217210 217210 0 2593 746 2683 6141 5149 5149 375 1 73469 0 DMTMFVTASK VKEHSRQINDIQLSRDMTMFVTASKDNTAK IQLSRDMTMFVTASKDNTAKLFDSTTLEHQ R D M S K D 1 0 0 1 0 0 0 0 0 0 0 1 2 1 0 1 2 0 0 1 0 0 10 0 1129.5148 Q13347 Q13347 199 208 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 1.3082E-07 203.29 By MS/MS 8 0.816 1 1 1 3 4876900 4876900 0 2594 1372 2684 6142;6143;6144 5150;5151 5151 2 71650 0 DMTMFVTASKDNTAK VKEHSRQINDIQLSRDMTMFVTASKDNTAK DMTMFVTASKDNTAKLFDSTTLEHQKTFRT R D M A K L 2 0 1 2 0 0 0 0 0 0 0 2 2 1 0 1 3 0 0 1 0 0 15 1 1658.7644 Q13347 Q13347 199 213 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 9.8909E-07 218.94 By MS/MS 7.5 0.5 1 1 2 2156900 2156900 0 2595 1372 2685 6145;6146 5152 5152 1 31560 0 DMTSEQLDDILK PRDAKACVVHGSDLKDMTSEQLDDILKYHT DLKDMTSEQLDDILKYHTEIVFARTSPQQK K D M L K Y 0 0 0 3 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 12 0 1406.6599 P05023 P05023 672 683 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.00050896 134.3 By MS/MS 2.8 1.17 1 1 1 2 5 983390 983390 0 2596 481 2686;2687 6147;6148;6149;6150;6151 5153;5154;5155 5155 184 3 168000 0 DNAELENLIR DRLASYLEKVRQLERDNAELENLIRERSQQ RQLERDNAELENLIRERSQQQEPLLCPSYQ R D N I R E 1 1 2 1 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1185.599 CON__Q14525;Q14525;CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009 CON__Q14525 80 89 KRT33B;KRT31;KRT33A Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I no no 2 0.00021537 154.84 By MS/MS 10 0 1 1 123820 0 123820 + 2597 59;61 2688 6152 5156 5156 1 0 158520 DNALLSAIEESR PVKDTDIQGFLKNEKDNALLSAIEESRKRT NEKDNALLSAIEESRKRTFGMAEEYHRESM K D N S R K 2 1 1 1 0 0 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 12 0 1316.6572 Q8N1F7 Q8N1F7 107 118 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.00038833 138.2 By MS/MS 4 0 1 1 317020 317020 0 2598 1903 2689 6153 5157;5158 5157 2 29834 0 DNALTLLIK LLDLLTEVGVSGQGRDNALTLLIKAVPRKS VSGQGRDNALTLLIKAVPRKSLKDPNNSLT R D N I K A 1 0 1 1 0 0 0 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 9 0 999.59645 Q9H3U1 Q9H3U1 313 321 UNC45A Protein unc-45 homolog A yes yes 2 1.9672E-10 209.58 By MS/MS 5.5 1.12 1 1 1 1 4 3479000 3479000 0 2599 2442 2690 6154;6155;6156;6157 5159;5160;5161 5159 3 247690 0 DNGKHALIIYDDLSK YLAPYSGCSMGEYFRDNGKHALIIYDDLSK DNGKHALIIYDDLSKQAVAYRQMSLLLRRP R D N S K Q 1 0 1 3 0 0 0 1 1 2 2 2 0 0 0 1 0 0 1 0 0 0 15 1 1700.8733 P25705 P25705 302 316 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.00030188 179.67 By MS/MS 6 0 2 2 12558000 12558000 0 2600 723 2691 6158;6159 5162;5163 5163 2 86328 0 DNGVVPVVK TQKAARNMSYQGFTKDNGVVPVVKELMGEE YQGFTKDNGVVPVVKELMGEEILGASLSAP K D N V K E 0 0 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 4 0 0 9 0 925.52328 Q9P2J5 Q9P2J5 342 350 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.012679 95.741 By MS/MS 3.5 0.5 1 1 2 1725200 1725200 0 2601 2684 2692 6160;6161 5164 5164 1 48259 0 DNHFAIFIIPQGR YTLHVVDSPTVKPSRDNHFAIFIIPQGRET SRDNHFAIFIIPQGRETEWLFGMDEGRKQL R D N G R E 1 1 1 1 0 1 0 1 1 3 0 0 0 2 1 0 0 0 0 0 0 0 13 0 1526.7994 Q8N6R0 Q8N6R0 297 309 METTL13 Methyltransferase-like protein 13 yes yes 2 0.000323 149.94 By MS/MS 5 0 1 1 220610 220610 0 2602 1929 2693 6162 5165 5165 1 2212.6 0 DNHLLGTFDLTGIPPAPR TVTIKVYEGERPLTKDNHLLGTFDLTGIPP LLGTFDLTGIPPAPRGVPQIEVTFEIDVNG K D N P R G 1 1 1 2 0 0 0 2 1 1 3 0 0 1 3 0 2 0 0 0 0 0 18 0 1933.0058 P11021 P11021 475 492 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 3.164E-05 196.18 By MS/MS 5 0 2 2 1069700 1069700 0 2603 571 2694 6163;6164 5166;5167 5167 2 10728 0 DNICGALAR LLFPLLARERHDRVRDNICGALARLLMASP RHDRVRDNICGALARLLMASPTRKPEPQVL R D N A R L 2 1 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 988.47601 Q8TEX9 Q8TEX9 959 967 IPO4 Importin-4 yes yes 2 0.012151 96.668 By MS/MS 3 0 1 1 572660 572660 0 2604 2005 2695 6165 5168 5168 1 10478 0 DNIFVLR D N L R 0 1 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 875.4865 REV__Q8TBY9 yes yes 2 0.009093 138.85 By MS/MS 4.33 0.471 2 1 3 2428100 2428100 0 + 2605 2976 2696 6166;6167;6168 5169 5169 1 205360 0 DNIQGITKPAIR GLGKGGAKRHRKVLRDNIQGITKPAIRRLA VLRDNIQGITKPAIRRLARRGGVKRISGLI R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 2;3 0.00014018 145.99 By MS/MS By matching 10 0 3 2 1 1651500 1623900 27569 2606 1170 2697 6169;6170;6171 5170;5171 5171 2 87522 35296 DNITNNTAAATVR LSKAIVLCFRLHFTKDNITNNTAAATVRQV TKDNITNNTAAATVRQVVTVVFERMVAEDE K D N V R Q 3 1 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 0 0 1 0 0 13 0 1359.6743 Q7Z3U7 Q7Z3U7 158 170 MON2 Protein MON2 homolog yes yes 2 4.2357E-12 244.73 By MS/MS 3 0.816 1 1 1 3 499320 499320 0 2607 1787 2698 6172;6173;6174 5172 5172 1 122960 0 DNIVEGIIR IFPFNIHENDRQQIRDNIVEGIIRSPDLVR DRQQIRDNIVEGIIRSPDLVRVQLTMCLRA R D N I R S 0 1 1 1 0 0 1 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1027.5662 O15397 O15397 94 102 IPO8 Importin-8 yes yes 2 0.01386 93.667 By MS/MS 3.5 0.5 1 1 2 1237000 1237000 0 2608 188 2699 6175;6176 5173 5173 1 112430 0 DNKQAGVFEPTIVK NLKWIGLDLSNGKPRDNKQAGVFEPTIVKV RDNKQAGVFEPTIVKVKSLKFATEAAITIL R D N V K V 1 0 1 1 0 1 1 1 0 1 0 2 0 1 1 0 1 0 0 2 0 0 14 1 1544.8199 P17987 P17987 497 510 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.3163E-05 201.38 By MS/MS 6.78 1.31 2 2 2 2 1 9 39030000 39030000 0 2609 648 2700 6177;6178;6179;6180;6181;6182;6183;6184;6185 5174;5175;5176 5174 3 293150 0 DNLEWLAR NSFMHCGTTSDQFLRDNLEWLARATNWAKF TSDQFLRDNLEWLARATNWAKFTATASLGV R D N A R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 8 0 1015.5087 Q99460 Q99460 388 395 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 3.8116E-06 184.49 By MS/MS 4 0.816 1 1 1 3 2081700 2081700 0 2610 2246 2701 6186;6187;6188 5177 5177 1 176810 0 DNLFEIVTTSR VHKVQECKQSDIMMRDNLFEIVTTSRTFYV IMMRDNLFEIVTTSRTFYVQADSPEEMHSW R D N S R T 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 1 2 0 0 1 0 0 11 0 1293.6565 Q9HB21 Q9HB21 255 265 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 2.0108E-06 180.66 By MS/MS 7 0 1 1 100060 100060 0 2611 2499 2702 6189 5178 5178 1 1570.8 0 DNLKGLEELER KGKLSMFVLLPSHSKDNLKGLEELERKITY SHSKDNLKGLEELERKITYEKMVAWSSSEN K D N E R K 0 1 1 1 0 0 3 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1314.6779 Q96P63 Q96P63 264 274 SERPINB12 Serpin B12 yes yes 3 0.0034776 113.38 By MS/MS 3 0 1 1 143680 0 143680 2612 2207 2703 6190 5179 5179 1 0 18288 DNNLLGK GVLIQVYEGERAMTKDNNLLGKFELTGIPP EGERAMTKDNNLLGKFELTGIPPAPRGVPQ K D N G K F 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 772.40792 P11142;P54652 P11142 452 458 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.012205 129.68 By MS/MS By matching 5 0 2 1 1 3013000 2963800 49103 2613 572 2704 6191;6192 5180 5180 1 29726 41236 DNNLLGR GVLIQVYEGERAMTKDNNLLGRFELSGIPP EGERAMTKDNNLLGRFELSGIPPAPRGVPQ K D N G R F 0 1 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 800.41407 P0DMV9;P0DMV8;P17066 P0DMV9 452 458 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2 0.020574 111.82 By MS/MS 5 0 1 1 4802400 4802400 0 2614 550;639 2705 6193 5181 5181 1 48166 0 DNNQFASASLDR EGHTHYVMQIVINPKDNNQFASASLDRTIK NPKDNNQFASASLDRTIKVWQLGSSSPNFT K D N D R T 2 1 2 2 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1336.6008 P35606 P35606 154 165 COPB2 Coatomer subunit beta yes yes 2 1.1184E-13 247.3 By MS/MS 2.5 1.12 1 1 1 1 4 6048400 6048400 0 2615 826 2706 6194;6195;6196;6197 5182;5183;5184 5182 3 1135900 0 DNPGVVTCLDEAR NGEQPLSAMVSMVTKDNPGVVTCLDEARHG TKDNPGVVTCLDEARHGFESGDFVSFSEVQ K D N A R H 1 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1444.6616 P22314 P22314 227 239 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 2.9962E-05 182.1 By MS/MS 4 0 1 1 1450700 1450700 0 2616 691 2707 6198 5185 5185 1 136520 0 DNPIEDELVFR VRRPSSMYSTGGKRKDNPIEDELVFRVGSR GKRKDNPIEDELVFRVGSRGREKGEFTNLQ K D N F R V 0 1 1 2 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 11 0 1345.6514 O75382 O75382 465 475 TRIM3 Tripartite motif-containing protein 3 yes yes 2 0.0089645 93.442 By MS/MS 5 0 1 1 154470 154470 0 2617 320 2708 6199 5186 5186 1 1549.2 0 DNPLDPVLAK VSFAQLKNLKWLDLKDNPLDPVLAKVAGDC WLDLKDNPLDPVLAKVAGDCLDEKQCKQCA K D N A K V 1 0 1 2 0 0 0 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 10 0 1080.5815 Q96AG4 Q96AG4 117 126 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.00042349 134.77 By MS/MS 7.5 0.5 1 1 2 2385000 2385000 0 2618 2107 2709 6200;6201 5187 5187 1 36738 0 DNPLNEGTDAAR GFCYLANQWQVSKPKDNPLNEGTDAARAAI KPKDNPLNEGTDAARAAIAFSFFSIFTWAG K D N A R A 2 1 2 2 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 12 0 1271.5742 O43759 O43759 137 148 SYNGR1 Synaptogyrin-1 yes yes 2 3.5488E-07 202.31 By MS/MS 9 0 1 1 785790 785790 0 2619 232 2710 6202 5188 5188 1 15465 0 DNPNLLFNMCGFECR TTVQWENSFVSVYSKDNPNLLFNMCGFECR DNPNLLFNMCGFECRILPKCRTSYEEFTHK K D N C R I 0 1 3 1 2 0 1 1 0 0 2 0 1 2 1 0 0 0 0 0 0 0 15 0 1885.791 Q6P2Q9 Q6P2Q9 1181 1195 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00048317 161.87 By MS/MS 2 0 1 1 170080 170080 0 2620 1708 2711 6203 5189;5190 5190 911 2 57527 0 DNQTLSHSLK SLKTNTLAAQSVIKKDNQTLSHSLKMADQN SVIKKDNQTLSHSLKMADQNLEKLKTESER K D N L K M 0 0 1 1 0 1 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1141.5728 Q9NZ43 Q9NZ43 197 206 USE1 Vesicle transport protein USE1 yes yes 2 0.0055163 104.42 By MS/MS 8 0 1 1 785140 785140 0 2621 2644 2712 6204 5191 5191 1 9912.3 0 DNSDFDLLTVSETANEPPQDEGNSFNSPR IVVQRVGSKLFFDKRDNSDFDLLTVSETAN NEPPQDEGNSFNSPRNLAMEATYINHNFSQ R D N P R N 1 1 4 4 0 1 3 1 0 0 2 0 0 2 3 4 2 0 0 1 0 0 29 0 3194.3912 O15371 O15371 282 310 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 3.4784E-13 173.25 By MS/MS 5.5 0.5 1 1 2 6988400 6988400 0 2622 185 2713 6205;6206 5192;5193;5194;5195 5194 4 53819 0 DNSHPFVGLAFK DDSKEKTKILMNSSRDNSHPFVGLAFKLEV SSRDNSHPFVGLAFKLEVGRFGQLTYVRSY R D N F K L 1 0 1 1 0 0 0 1 1 0 1 1 0 2 1 1 0 0 0 1 0 0 12 0 1330.667 Q96RP9 Q96RP9 348 359 GFM1 Elongation factor G, mitochondrial yes yes 2;3 0.00056281 145.23 By MS/MS 5.75 0.829 2 1 1 4 6202100 6202100 0 2623 2223 2714 6207;6208;6209;6210 5196;5197 5197 2 60975 0 DNSNIILLGDSQGDLR HDGALRNTEYFNQLKDNSNIILLGDSQGDL NSNIILLGDSQGDLRMADGVANVEHILKIG K D N L R M 0 1 2 3 0 1 0 2 0 2 3 0 0 0 0 2 0 0 0 0 0 0 16 0 1728.8642 Q9H0P0 Q9H0P0 268 283 NT5C3A Cytosolic 5-nucleotidase 3A yes yes 2 8.4915E-18 269.88 By MS/MS 7 0 1 1 937380 937380 0 2624 2412 2715 6211 5198 5198 1 14715 0 DNSTMGYMAAK WTANMERIMKAQALRDNSTMGYMAAKKHLE QALRDNSTMGYMAAKKHLEINPDHSIIETL R D N A K K 2 0 1 1 0 0 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 11 0 1187.4951 P07900 P07900 621 631 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.00024275 139.38 By MS/MS 4 0 1 1 850080 850080 0 2625 513 2716 6212 5199 5199 1 79998 0 DNSTMGYMMAK WTANMERIMKAQALRDNSTMGYMMAKKHLE QALRDNSTMGYMMAKKHLEINPDHPIVETL R D N A K K 1 0 1 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 1 0 0 0 11 0 1247.4985 P08238;Q58FF7 P08238 613 623 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 4.0645E-13 233.09 By MS/MS 4 0 1 1 919590 919590 0 2626 521 2717 6213 5200 5200 1 86540 0 DNTAKLFDSTTLEHQK IQLSRDMTMFVTASKDNTAKLFDSTTLEHQ NTAKLFDSTTLEHQKTFRTERPVNSAALSP K D N Q K T 1 0 1 2 0 1 1 0 1 0 2 2 0 1 0 1 3 0 0 0 0 0 16 1 1846.9061 Q13347 Q13347 209 224 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 3 0.00028519 148.18 By MS/MS 7 0 1 1 818950 818950 0 2627 1372 2718 6214 5201 5201 1 12856 0 DNTSVYHISGK VIPNSNFYVSRTACRDNTSVYHISGKKKTF TACRDNTSVYHISGKKKTFKDVGNLLRSHG R D N G K K 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 2 1 0 1 1 0 0 11 0 1219.5833 Q9NTJ3 Q9NTJ3 192 202 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.029201 80.834 By MS/MS 3 0 1 1 749140 749140 0 2628 2575 2719 6215 5202 5202 1 13707 0 DNVCYSR RWNRVRMPVGSPLLRDNVCYSRTPWKLYH_ PVGSPLLRDNVCYSRTPWKLYH________ R D N S R T 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 7 0 912.37597 Q9NVS2 Q9NVS2 183 189 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 0.013229 127.02 By MS/MS By matching 9.33 0.471 2 1 2 1 2508700 2477100 31578 2629 2602 2720 6216;6217;6218 5203;5204 5204 2 58278 72008 DNVDDPTGNFR WTKIEPSVNFLKSPKDNVDDPTGNFRSGPL KSPKDNVDDPTGNFRSGPLTGWRVFLLLLC K D N F R S 0 1 2 3 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 11 0 1248.5371 Q12907 Q12907 304 314 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 2 0.00015231 147.3 By MS/MS 7 0 1 1 1371400 1371400 0 2630 1339 2721 6219 5205 5205 1 21529 0 DNYPQSVPR LQQKAVASEIFKGKKDNYPQSVPRLFISTR IFKGKKDNYPQSVPRLFISTRLGTDEISPR K D N P R L 0 1 1 1 0 1 0 0 0 0 0 0 0 0 2 1 0 0 1 1 0 0 9 0 1074.5094 O00159 O00159 886 894 MYO1C Unconventional myosin-Ic yes yes 2 0.0047503 109.66 By MS/MS 4 0 1 1 1313500 1313500 0 2631 85 2722 6220 5206 5206 1 123610 0 DNYSPGWK RRLLSVNIRVRADLRDNYSPGWKFNHWELK RVRADLRDNYSPGWKFNHWELKGVPIRLEV R D N W K F 0 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 1 1 0 0 0 8 0 965.4243 P07814 P07814 1347 1354 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.021662 97.798 By MS/MS 3 0 1 1 711230 711230 0 2632 512 2723 6221 5207 5207 1 13014 0 DPAAAPATGNK RTTISRAKPVWYAGRDPAAAPATGNKKTHL YAGRDPAAAPATGNKKTHLTELQRLLDTAF R D P N K K 4 0 1 1 0 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 11 0 1011.4985 Q02218 Q02218 989 999 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.039116 75.652 By MS/MS 4 0 1 1 449530 449530 0 2633 1275 2724 6222 5208 5208 1 42304 0 DPATYNIATLK VKRVLALTETCLVERDPATYNIATLKPLGE LVERDPATYNIATLKPLGEVFALVCDSENP R D P L K P 2 0 1 1 0 0 0 0 0 1 1 1 0 0 1 0 2 0 1 0 0 0 11 0 1205.6292 O75165 O75165 266 276 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.035362 70.942 By MS/MS 7 0 1 1 676230 676230 0 2634 302 2725 6223 5209 5209 1 10616 0 DPEEIEKEEQAAAEK REHPWEVMPDLYFYRDPEEIEKEEQAAAEK DPEEIEKEEQAAAEKAVTKEEFQGEWTAPA R D P E K A 3 0 0 1 0 1 6 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 15 1 1714.7897 P08865 P08865 206 220 RPSA 40S ribosomal protein SA yes yes 2;3 7.9878E-16 240.18 By MS/MS 7 0 2 2 6927300 6927300 0 2635 529 2726 6224;6225 5210;5211 5210 2 108750 0 DPEFVFYDQLK YLKDVKQHHVKADKRDPEFVFYDQLKQVMN ADKRDPEFVFYDQLKQVMNAYRVKPAVFDL R D P L K Q 0 0 0 2 0 1 1 0 0 0 1 1 0 2 1 0 0 0 1 1 0 0 11 0 1399.666 Q969V3 Q969V3 501 511 NCLN Nicalin yes yes 2 0.001229 117.02 By MS/MS 6 0 1 1 766480 766480 0 2636 2096 2727 6226 5212 5212 1 5268.9 0 DPELGLK TPVIVGSALCALEGRDPELGLKSVQKLLDA ALCALEGRDPELGLKSVQKLLDAVDTYIPV R D P L K S 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 7 0 770.41742 P49411 P49411 228 234 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.0044037 157.99 By MS/MS 7.5 0.5 1 1 2 6606800 6606800 0 2637 949 2728 6227;6228 5213 5213 1 102810 0 DPENFPFVVLGNK LDSWRDEFLIQASPRDPENFPFVVLGNKID PRDPENFPFVVLGNKIDLENRQVATKRAQA R D P N K I 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 0 0 0 0 2 0 0 13 0 1474.7456 P51149 P51149 114 126 RAB7A Ras-related protein Rab-7a yes yes 2 0.00056942 133.89 By MS/MS 8.5 0.5 1 1 2 253560 253560 0 2638 990 2729 6229;6230 5214;5215;5216 5216 3 4794.4 0 DPESETDNDSQEIFK EQMYNILMWIHDNYRDPESETDNDSQEIFK DPESETDNDSQEIFKLAKDVLIQGLIDENP R D P F K L 0 0 1 3 0 1 3 0 0 1 0 1 0 1 1 2 1 0 0 0 0 0 15 0 1752.7326 P78527 P78527 2486 2500 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.6577E-43 322.23 By MS/MS 1.5 0.5 1 1 2 546310 546310 0 2639 1225 2730 6231;6232 5217 5217 1 167160 0 DPETLVGYSMVGCQR WVGVSGSETSEALSRDPETLVGYSMVGCQR DPETLVGYSMVGCQRAMMANRLSFFFDFRG R D P Q R A 0 1 0 1 1 1 1 2 0 0 1 0 1 0 1 1 1 0 1 2 0 0 15 0 1710.7705 P49327 P49327 123 137 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 4.9409E-24 284.1 By MS/MS 2.62 0.992 1 3 2 2 8 5396200 5396200 0 2640 946 2731;2732 6233;6234;6235;6236;6237;6238;6239;6240 5218;5219;5220;5221;5222;5223 5219 501 6 1275500 0 DPFSSSLQNR RCLHPLLVVVSCLTRDPFSSSLQNRAEVDK SCLTRDPFSSSLQNRAEVDKVKALLSHDSG R D P N R A 0 1 1 1 0 1 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 10 0 1149.5415 Q7L2E3 Q7L2E3 909 918 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00074222 128.6 By MS/MS 4 0.816 1 1 1 3 4289900 4289900 0 2641 1761 2733 6241;6242;6243 5224 5224 1 116580 0 DPGVITYDLPTPPGEK PPGEKKPKPEKREKRDPGVITYDLPTPPGE PGVITYDLPTPPGEKKDVSGPMPDSYSPRY R D P E K K 0 0 0 2 0 0 1 2 0 1 1 1 0 0 4 0 2 0 1 1 0 0 16 0 1697.8512 P26640 P26640 274 289 VARS Valine--tRNA ligase yes yes 2 0.0010944 117.79 By MS/MS 3 0 1 1 114170 114170 0 2642 735 2734 6244 5225 5225 1 2089.1 0 DPIYFTGLASEPGAR STDEGQCWQTYTFTRDPIYFTGLASEPGAR DPIYFTGLASEPGARSMNISIWGFTESFLT R D P A R S 2 1 0 1 0 0 1 2 0 1 1 0 0 1 2 1 1 0 1 0 0 0 15 0 1592.7835 Q99523 Q99523 565 579 SORT1 Sortilin yes yes 2 5.0384E-16 199.82 By MS/MS 4 0 1 1 662750 662750 0 2643 2248 2735 6245 5226 5226 0 62369 0 DPLAADESAPQR KKKAVSFHLVHRSQRDPLAADESAPQRVLL SQRDPLAADESAPQRVLLPTQKIDNEERRA R D P Q R V 3 1 0 2 0 1 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 12 0 1268.5997 Q96GA3 Q96GA3 27 38 LTV1 Protein LTV1 homolog yes yes 2 0.00036297 139.86 By MS/MS 5 0 1 1 811200 811200 0 2644 2157 2736 6246 5227 5227 1 8135.9 0 DPLLLAIIPK QMTWGALFRHEILSRDPLLLAIIPKYLRAS EILSRDPLLLAIIPKYLRASMTNLVKMGFP R D P P K Y 1 0 0 1 0 0 0 0 0 2 3 1 0 0 2 0 0 0 0 0 0 0 10 0 1091.6954 Q9HAV4 Q9HAV4 387 396 XPO5 Exportin-5 yes yes 2 0.012046 90.657 By MS/MS 4.5 1.12 1 1 1 1 4 318190 318190 0 2645 2495 2737 6247;6248;6249;6250 5228;5229;5230 5228 3 11362 0 DPNLFPFEK LQLESPKLHAEAIKRDPNLFPFEKEGPHYT AEAIKRDPNLFPFEKEGPHYTPPIPNYQPP R D P E K E 0 0 1 1 0 0 1 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 9 0 1105.5444 Q9NQ50 Q9NQ50 165 173 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2 0.037112 81.525 By MS/MS 9 0 1 1 697180 697180 0 2646 2536 2738 6251 5231 5231 1 13721 0 DPNNLFMVR RLAAMLRQLAQYHAKDPNNLFMVRLAQGLT AQYHAKDPNNLFMVRLAQGLTHLGKGTLTL K D P V R L 0 1 2 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 9 0 1104.5386 Q13200 Q13200 755 763 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 2.6307E-05 175.91 By MS/MS 4 0 2 2 2433200 2433200 0 2647 1365 2739;2740 6252;6253 5232;5233 5232 789 2 228980 0 DPNNLLNDWSQK KVDRLAGIINFQRPKDPNNLLNDWSQKLNS RPKDPNNLLNDWSQKLNSLMSLVNKTTHLI K D P Q K L 0 0 3 2 0 1 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 12 0 1442.679 O00232 O00232 420 431 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.00024969 147.24 By MS/MS 6 0 1 1 2202100 2202100 0 2648 94 2741 6254 5234 5234 1 15138 0 DPNTQSVGNPQR FHSHPGTHCPSPAVKDPNTQSVGNPQRIGW AVKDPNTQSVGNPQRIGWPHFKEIFMLSAL K D P Q R I 0 1 2 1 0 2 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 0 12 0 1311.6167 O75616 O75616 285 296 ERAL1 GTPase Era, mitochondrial yes yes 2 6.6521E-18 256.48 By MS/MS 7.5 0.5 1 1 2 3086600 3086600 0 2649 339 2742 6255;6256 5235 5235 1 48091 0 DPQLVPILIEAAR FLTTAIRPHGIFGPRDPQLVPILIEAARNG PRDPQLVPILIEAARNGKMKFVIGNGKNLV R D P A R N 2 1 0 1 0 1 1 0 0 2 2 0 0 0 2 0 0 0 0 1 0 0 13 0 1433.8242 Q15738 Q15738 208 220 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.029707 76.588 By MS/MS 7 0 1 1 109170 109170 0 2650 1526 2743 6257 5236 5236 1 1713.8 0 DPSASPGDAGEQAIR ASIDSKLNQAKGWLRDPSASPGDAGEQAIR DPSASPGDAGEQAIRQILDEAGKVGELCAG R D P I R Q 3 1 0 2 0 1 1 2 0 1 0 0 0 0 2 2 0 0 0 0 0 0 15 0 1469.6746 P18206 P18206 286 300 VCL Vinculin yes yes 2 0.0023706 110.98 By MS/MS 3 0 1 1 128770 128770 0 2651 653 2744 6258 5237 5237 1 2356.2 0 DPSGLLISVIR EAAGGKYRSTVSKSKDPSGLLISVIRTLST SKSKDPSGLLISVIRTLSTSDDVEDRENEK K D P I R T 0 1 0 1 0 0 0 1 0 2 2 0 0 0 1 2 0 0 0 1 0 0 11 0 1168.6816 Q96A65 Q96A65 19 29 EXOC4 Exocyst complex component 4 yes yes 2 0.037911 76.282 By MS/MS 4 0 1 1 126470 126470 0 2652 2104 2745 6259 5238 5238 1 11902 0 DPSKNQGGGLSSSGAGEGQGPK EKQNKPQKQNDGQRKDPSKNQGGGLSSSGA GGLSSSGAGEGQGPKKQTRLGLEAKKEENL K D P P K K 1 0 1 1 0 2 1 7 0 0 1 2 0 0 2 4 0 0 0 0 0 0 22 1 2013.9352 P07814 P07814 988 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.00025257 100.95 By MS/MS 3 0 1 1 381580 381580 0 2653 512 2746 6260 5239 5239 1 6981.9 0 DPSQIDNNEPYMK KQMGYQCFVSFFDLRDPSQIDNNEPYMKIP LRDPSQIDNNEPYMKIPCNDSKITSAVWGP R D P M K I 0 0 2 2 0 1 1 0 0 1 0 1 1 0 2 1 0 0 1 0 0 0 13 0 1549.6719 Q13347 Q13347 129 141 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 1.6814E-17 266.26 By MS/MS 7.5 0.5 2 2 4 8637500 8637500 0 2654 1372 2747;2748 6261;6262;6263;6264 5240;5241 5241 799 2 133000 0 DPSQQELPR LKMVVPGLDGAQIPRDPSQQELPRLLSAAC GAQIPRDPSQQELPRLLSAACRLQLNGNLQ R D P P R L 0 1 0 1 0 2 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1068.52 P49327 P49327 1172 1180 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.5956E-22 249.93 By MS/MS 2 0.816 1 1 1 3 23578000 23578000 0 2655 946 2749 6265;6266;6267 5242;5243;5244 5243 3 5500100 0 DPSSVPNADNAFTLFYVK TVNTLQTLTSQLLKRDPSSVPNADNAFTLF SVPNADNAFTLFYVKFRAAAPKVRTLIEQI R D P V K F 2 0 2 2 0 0 0 0 0 0 1 1 0 2 2 2 1 0 1 2 0 0 18 0 1983.9578 Q96JB2 Q96JB2 282 299 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 9.4821E-05 181.58 By MS/MS 4 0 1 1 283520 283520 0 2656 2176 2750 6268 5245 5245 1 26681 0 DPTAEQFQEELEK EHMFRQLRFESTMKRDPTAEQFQEELEKFQ KRDPTAEQFQEELEKFQQAIDSREDPVSCA R D P E K F 1 0 0 1 0 2 4 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 13 0 1562.71 P31944 P31944 55 67 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2 1.5732E-13 211.63 By MS/MS 3 0 1 1 365410 0 365410 2657 792 2751 6269 5246 5246 1 0 46512 DPTGASIALFTAR RSEILSGKFTILNVRDPTGASIALFTARLH VRDPTGASIALFTARLHHPHKSVQHVVLQA R D P A R L 3 1 0 1 0 0 0 1 0 1 1 0 0 1 1 1 2 0 0 0 0 0 13 0 1318.6881 P43378 P43378 103 115 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 2 0.00041156 140.78 By MS/MS 5.5 0.5 1 1 2 913690 913690 0 2658 898 2752 6270;6271 5247 5247 1 6651.4 0 DPVQLNLLYVQAR LRRKFFYSDQNVDSRDPVQLNLLYVQARDD SRDPVQLNLLYVQARDDILNGSHPVSFDKA R D P A R D 1 1 1 1 0 2 0 0 0 0 3 0 0 0 1 0 0 0 1 2 0 0 13 0 1527.8409 Q9Y490;Q9Y4G6 Q9Y490 208 220 TLN1;TLN2 Talin-1;Talin-2 no no 2 1.1982E-12 247.31 By MS/MS 2 0 1 1 175090 175090 0 2659 2888;2895 2753 6272 5248;5249 5249 2 59223 0 DPVSIEER FESGDRTSIFWNDVKDPVSIEERARWTETY IFWNDVKDPVSIEERARWTETYVRWSPKGT K D P E R A 0 1 0 1 0 0 2 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 8 0 943.46108 P55884 P55884 325 332 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0039801 130.22 By MS/MS 4 0 1 1 666150 666150 0 2660 1065 2754 6273 5250 5250 1 62689 0 DQAAEGINLIK YHVLHPDGQSAQGAKDQAAEGINLIKVFAK QGAKDQAAEGINLIKVFAKTEAQKGAYIEL K D Q I K V 2 0 1 1 0 1 1 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1170.6245 P82650 P82650 319 329 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 4.4633E-07 197.79 By MS/MS By MS/MS 7 0 2 1 1 14583000 14512000 71460 2661 1229 2755 6274;6275 5251;5252 5252 2 227810 128700 DQAAEGINLIKVFAK YHVLHPDGQSAQGAKDQAAEGINLIKVFAK DQAAEGINLIKVFAKTEAQKGAYIELTLQT K D Q A K T 3 0 1 1 0 1 1 1 0 2 1 2 0 1 0 0 0 0 0 1 0 0 15 1 1615.8934 P82650 P82650 319 333 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 6.8075E-07 221.09 By MS/MS 7 0 1 1 147100 147100 0 2662 1229 2756 6276 5253;5254 5253 2 2309.3 0 DQDELNPYAAWR PDKVLRMLYVWALCRDQDELNPYAAWRLLD LCRDQDELNPYAAWRLLDISASSTEQIL__ R D Q W R L 2 1 1 2 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 12 0 1476.6634 O43615 O43615 428 439 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 3.4925E-06 192.44 By MS/MS 7 0 1 1 1623000 1623000 0 2663 221 2757 6277 5255 5255 1 25478 0 DQDLEPGAPSMGAK GEIDCEDWIKKTTARDQDLEPGAPSMGAKS RDQDLEPGAPSMGAKSLCIPFKPLCELQPG R D Q A K S 2 0 0 2 0 1 1 2 0 0 1 1 1 0 2 1 0 0 0 0 0 0 14 0 1414.6398 P07814 P07814 1464 1477 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00040685 155.47 By MS/MS 3.5 0.5 2 2 4 4028700 4028700 0 2664 512 2758;2759 6278;6279;6280;6281 5256;5257;5258 5257 215 3 154960 0 DQDLITIIGK DSTGARVIFPAAEDKDQDLITIIGKEDAVR AAEDKDQDLITIIGKEDAVREAQKELEALI K D Q G K E 0 0 0 2 0 1 0 1 0 3 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1114.6234 Q00341 Q00341 770 779 HDLBP Vigilin yes yes 2 0.00041942 134.84 By MS/MS 3 0 1 1 52486 52486 0 2665 1260 2760 6282 5259 5259 1 960.35 0 DQDNMQAELNR TQMLDQEELLASTRRDQDNMQAELNRLQAE STRRDQDNMQAELNRLQAENDASKEEVKEV R D Q N R L 1 1 2 2 0 2 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 11 0 1332.5728 P33176 P33176 466 476 KIF5B Kinesin-1 heavy chain yes yes 2 8.7057E-07 192.44 By MS/MS 4 0 1 1 564740 564740 0 2666 800 2761 6283 5260 5260 1 53146 0 DQEALEAVKR NKQAEVKKMDSGYRKDQEALEAVKRLKEKL SGYRKDQEALEAVKRLKEKLEAEMKKLNYE K D Q K R L 2 1 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1157.6041 O95347 O95347 447 456 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.040007 90.827 By MS/MS 3 0 1 1 579470 579470 0 2667 405 2762 6284 5261 5261 1 10603 0 DQFGFINYEVGDSK YNITPLRRATVECVKDQFGFINYEVGDSKK KDQFGFINYEVGDSKKLFFHVKEVQDGIEL K D Q S K K 0 0 1 2 0 1 1 2 0 1 0 1 0 2 0 1 0 0 1 1 0 0 14 0 1617.7311 O75534 O75534 683 696 CSDE1 Cold shock domain-containing protein E1 yes yes 2 6.4148E-06 201.48 By MS/MS 4 0 1 1 418310 418310 0 2668 333 2763 6285 5262 5262 1 39365 0 DQGTYEDYVEGLR FEHFLPMLQTVAKNKDQGTYEDYVEGLRVF NKDQGTYEDYVEGLRVFDKEGNGTVMGAEI K D Q L R V 0 1 0 2 0 1 2 2 0 0 1 0 0 0 0 0 1 0 2 1 0 0 13 0 1543.6791 P60660 P60660 82 94 MYL6 Myosin light polypeptide 6 yes yes 2 1.0354E-07 212.68 By MS/MS 10 0 1 1 424820 424820 0 2669 1094 2764 6286 5263 5263 1 22896 0 DQIIELDQTGNQLK IEEHKVFANEVNAHRDQIIELDQTGNQLKF RDQIIELDQTGNQLKFLSQKQDVVLIKNLL R D Q L K F 0 0 1 2 0 3 1 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 14 0 1613.8261 Q9UPN3 Q9UPN3 6497 6510 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 0.0065479 102.87 By MS/MS 1 0 1 1 109520 109520 0 2670 2798 2765 6287 5264 5264 0 26391 0 DQITAGNAAR YELLDSPGKVLLQSKDQITAGNAARKNHLE LLQSKDQITAGNAARKNHLEGKAAISNKIT K D Q A R K 3 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1015.5047 P22234 P22234 37 46 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.00013993 151.22 By MS/MS 6.5 0.5 1 1 2 7611300 7611300 0 2671 689 2766 6288;6289 5265 5265 1 116190 0 DQIVDLTVGNNK QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF K D Q N K T 0 0 2 2 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1314.6779 P35527;CON__P35527 P35527 213 224 KRT9 Keratin, type I cytoskeletal 9 yes no 2 6.0207E-28 293.88 By MS/MS By MS/MS 4.18 2.66 2 2 1 1 2 1 1 1 3 8 3480800 1314800 2166100 + 2672 822 2767 6290;6291;6292;6293;6294;6295;6296;6297;6298;6299;6300 5266;5267;5268;5269;5270;5271;5272;5273;5274;5275;5276 5272 11 219860 2054600 DQIYDIFQK FVLDEADEMLSRGFKDQIYDIFQKLNSNTQ LSRGFKDQIYDIFQKLNSNTQVVLLSATMP K D Q Q K L 0 0 0 2 0 2 0 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 9 0 1168.5764 P60842 P60842 194 202 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 5.0732E-07 191.17 By MS/MS 5.18 2.29 1 1 1 1 1 2 2 2 11 36302000 36302000 0 2673 1097 2768 6301;6302;6303;6304;6305;6306;6307;6308;6309;6310;6311 5277;5278;5279;5280;5281;5282;5283 5282 7 627920 0 DQKWHDK CRGLRTARKLRSHRRDQKWHDKQYKKAHLG RKLRSHRRDQKWHDKQYKKAHLGTALKANP R D Q D K Q 0 0 0 2 0 1 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 7 1 955.45118 P62266 P62266 19 25 RPS23 40S ribosomal protein S23 yes yes 3 0.047822 97.473 By MS/MS 10 0 1 1 96617 96617 0 2674 1148 2769 6312 5284 5284 1 5207.3 0 DQKWHDKQYK CRGLRTARKLRSHRRDQKWHDKQYKKAHLG RSHRRDQKWHDKQYKKAHLGTALKANPFGG R D Q Y K K 0 0 0 2 0 2 0 0 1 0 0 3 0 0 0 0 0 1 1 0 0 0 10 2 1374.668 P62266 P62266 19 28 RPS23 40S ribosomal protein S23 yes yes 3 0.0078338 96.171 By MS/MS 9.5 0.5 1 1 2 1211900 1211900 0 2675 1148 2770 6313;6314 5285 5285 1 43997 0 DQLALAIGK LSGLPAGPDREGSLKDQLALAIGKLGENMI REGSLKDQLALAIGKLGENMILKRAAWVKV K D Q G K L 2 0 0 1 0 1 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 927.53893 P43897 P43897 184 192 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.015066 101.65 By MS/MS 7.5 0.5 1 1 2 2048600 2048600 0 2676 901 2771 6315;6316 5286 5286 1 29668 0 DQLIYNLLKEEQTPQNK ______________________________ LIYNLLKEEQTPQNKITVVGVGAVGMACAI K D Q N K I 0 0 2 1 0 3 2 0 0 1 3 2 0 0 1 0 1 0 1 0 0 0 17 1 2073.0742 P00338 P00338 6 22 LDHA L-lactate dehydrogenase A chain yes yes 3 0.0002699 130.02 By MS/MS 8 0 1 1 203080 203080 0 2677 440 2772 6317 5287;5288 5287 2 2563.8 0 DQLLLGPTYATPK KAYLRDFMYVSQDPKDQLLLGPTYATPKVL PKDQLLLGPTYATPKVLEKAGLTMNDIDAF K D Q P K V 1 0 0 1 0 1 0 1 0 0 3 1 0 0 2 0 2 0 1 0 0 0 13 0 1415.766 P55084 P55084 349 361 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 1.6338E-07 205.07 By MS/MS By matching 6.33 0.471 2 1 2 1 12835000 12792000 43023 2678 1055 2773 6318;6319;6320 5289;5290;5291 5291 3 124970 44087 DQLNDQYLELLEK RMKMEKKKQENKMRRDQLNDQYLELLEKQR RRDQLNDQYLELLEKQRLYFKTVKEFKEEG R D Q E K Q 0 0 1 2 0 2 2 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 13 0 1619.8043 Q567U6 Q567U6 589 601 CCDC93 Coiled-coil domain-containing protein 93 yes yes 2 7.7964E-17 249.69 By MS/MS 5 0 1 1 484460 484460 0 2679 1595 2774 6321 5292 5292 1 4858.9 0 DQLQTFSEEHPVLLTEAPLNPR DWNDMERIWQYVYSKDQLQTFSEEHPVLLT EEHPVLLTEAPLNPRKNRERAAEVFFETFN K D Q P R K 1 1 1 1 0 2 3 0 1 0 4 0 0 1 3 1 2 0 0 1 0 0 22 0 2533.2813 P61163 P61163 97 118 ACTR1A Alpha-centractin yes yes 3 3.6611E-06 141.93 By MS/MS 6.5 0.5 1 1 2 1919000 1919000 0 2680 1113 2775 6322;6323 5293 5293 1 22519 0 DQNILLGTTYR NNVSSYLSKNILAFRDQNILLGTTYRIIAN LAFRDQNILLGTTYRIIANALSSEPACLAE R D Q Y R I 0 1 1 1 0 1 0 1 0 1 2 0 0 0 0 0 2 0 1 0 0 0 11 0 1292.6725 P78527 P78527 3325 3335 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.1114E-13 244.16 By MS/MS 2.5 1.12 1 1 1 1 4 4098100 4098100 0 2681 1225 2776 6324;6325;6326;6327 5294;5295;5296;5297 5294 4 795950 0 DQPYYDIPDAPYR ILQTLSLSLSADIHKDQPYYDIPDAPYRIT HKDQPYYDIPDAPYRITVPDTYEARESIVK K D Q Y R I 1 1 0 3 0 1 0 0 0 1 0 0 0 0 3 0 0 0 3 0 0 0 13 0 1611.7205 P42356 P42356 1028 1040 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0055776 101.89 By MS/MS 2.5 0.5 1 1 2 306420 306420 0 2682 880 2777 6328;6329 5298 5298 1 82166 0 DQSAVVVQGLPEGVAFK GKSTVVPVPYEKMLRDQSAVVVQGLPEGVA SAVVVQGLPEGVAFKHPENYDLATLKWILE R D Q F K H 2 0 0 1 0 2 1 2 0 0 1 1 0 1 1 1 0 0 0 4 0 0 17 0 1742.9203 P78347 P78347 144 160 GTF2I General transcription factor II-I yes yes 2 1.8405E-05 200.76 By MS/MS 3.5 0.5 1 1 2 403810 403810 0 2683 1221 2778 6330;6331 5299 5299 1 28610 0 DQSTYISAIRER EELWLDGNSLCDTFRDQSTYISAIRERFPK TFRDQSTYISAIRERFPKLLRLDGHELPPP R D Q E R F 1 2 0 1 0 1 1 0 0 2 0 0 0 0 0 2 1 0 1 0 0 0 12 1 1437.7212 Q9UBU9 Q9UBU9 333 344 NXF1 Nuclear RNA export factor 1 yes yes 3 0.031042 69.815 By MS/MS 6 0 1 1 1969800 1969800 0 2684 2705 2779 6332 5300 5300 1 13541 0 DQTIVDPFSSK MYIKQVIIQGFRSYRDQTIVDPFSSKHNVI RSYRDQTIVDPFSSKHNVIVGRNGSGKSNF R D Q S K H 0 0 0 2 0 1 0 0 0 1 0 1 0 1 1 2 1 0 0 1 0 0 11 0 1235.6034 Q9UQE7 Q9UQE7 16 26 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.001116 119.27 By MS/MS 3 0 1 1 380800 380800 0 2685 2807 2780 6333 5301 5301 1 6967.5 0 DQTPDENDQVIVK NELQNLTAAEVVVPRDQTPDENDQVIVKII PRDQTPDENDQVIVKIIGHFYASQMAQRKI R D Q V K I 0 0 1 3 0 2 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1499.7104 Q9NZI8 Q9NZI8 526 538 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 2.4629E-11 227.36 By MS/MS By matching 5 0 2 1 1 4314900 4284700 30212 2686 2649 2781 6334;6335 5302 5302 1 42973 25372 DQVANSAFVER KENQKHIYYITGETKDQVANSAFVERLRKH GETKDQVANSAFVERLRKHGLEVIYMIEPI K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 1.5516E-06 183.85 By MS/MS By matching 5 2.14 1 2 1 1 1 1 6 1 40566000 40380000 185340 2687 513 2782 6336;6337;6338;6339;6340;6341;6342 5303;5304;5305;5306;5307 5305 3 3436600 394890 DQVIYPDGR FYVPQRPYMTLGTLRDQVIYPDGREDQKRK TLGTLRDQVIYPDGREDQKRKGISDLVLKE R D Q G R E 0 1 0 2 0 1 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 9 0 1061.5142 P28288 P28288 521 529 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.021746 88.177 By MS/MS By matching 3.25 1.79 1 1 2 3 1 3326500 3276200 50259 2688 752 2783 6343;6344;6345;6346 5308;5309 5308 2 172490 42207 DQVIYPDGREDQK FYVPQRPYMTLGTLRDQVIYPDGREDQKRK LRDQVIYPDGREDQKRKGISDLVLKEYLDN R D Q Q K R 0 1 0 3 0 2 1 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 13 1 1561.7372 P28288 P28288 521 533 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.0010852 160.72 By MS/MS 5 0 1 1 471260 471260 0 2689 752 2784 6347 5310 5310 1 4726.5 0 DQVLHEHIQR FKLAFYPNQDGDILRDQVLHEHIQRLSKVV GDILRDQVLHEHIQRLSKVVTANHRALQIP R D Q Q R L 0 1 0 1 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1273.6527 Q14C86 Q14C86 1341 1350 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 3 0.035824 76.228 By MS/MS 2 0 1 1 523110 523110 0 2690 1466 2785 6348 5311 5311 1 176940 0 DQVYPQYVIEYTEDK VDTRSNPSVFVIFQKDQVYPQYVIEYTEDK DQVYPQYVIEYTEDKACVIS__________ K D Q D K A 0 0 0 2 0 2 2 0 0 1 0 1 0 0 1 0 1 0 3 2 0 0 15 0 1888.8731 Q7Z2W4 Q7Z2W4 883 897 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 8.1392E-11 228.17 By MS/MS 4.5 0.5 1 1 2 2248400 2248400 0 2691 1778 2786 6349;6350 5312 5312 1 190800 0 DQYSVIFESGDR DLGNLRYWLEEAECRDQYSVIFESGDRTSI ECRDQYSVIFESGDRTSIFWNDVKDPVSIE R D Q D R T 0 1 0 2 0 1 1 1 0 1 0 0 0 1 0 2 0 0 1 1 0 0 12 0 1414.6365 P55884 P55884 304 315 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 8.1226E-13 240.85 By MS/MS By MS/MS 3.43 1.4 1 1 1 2 2 5 2 12307000 12219000 88387 2692 1065 2787 6351;6352;6353;6354;6355;6356;6357 5313;5314;5315;5316;5317;5318 5317 5 941320 147630 DREEALHQFR EGYACTSIHGDRSQRDREEALHQFRSGKSP DRSQRDREEALHQFRSGKSPILVATAVAAR R D R F R S 1 2 0 1 0 1 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1299.632 O00571;O15523 O00571 479 488 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.0015967 112.71 By MS/MS 5.94 2.51 1 1 1 1 3 2 2 2 2 1 16 74575000 74575000 0 2693 116 2788 6358;6359;6360;6361;6362;6363;6364;6365;6366;6367;6368;6369;6370;6371;6372;6373 5319;5320;5321;5322;5323;5324;5325;5326;5327 5322 9 894050 0 DRGEEDADGSK EKAWKPSSKRTAADKDRGEEDADGSKTQDL AADKDRGEEDADGSKTQDLFRRVRSILNKL K D R S K T 1 1 0 3 0 0 2 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 11 1 1177.4847 Q04637 Q04637 746 756 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00052958 162.36 By MS/MS 2 0 1 1 272190 272190 0 2694 1291 2789 6374 5328 5328 1 92064 0 DRGEEDADGSKTQDLFR EKAWKPSSKRTAADKDRGEEDADGSKTQDL GEEDADGSKTQDLFRRVRSILNKLTPQMFQ K D R F R R 1 2 0 4 0 1 2 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 17 2 1937.8715 Q04637 Q04637 746 762 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.00034311 130.64 By MS/MS 2.5 0.5 1 1 2 2041400 2041400 0 2695 1291 2790 6375;6376 5329 5329 1 629780 0 DRGVAASAGSSGENKK FLKGTSISTKPPLTKDRGVAASAGSSGENK RGVAASAGSSGENKKAKPVPWVEKYRPKCV K D R K K A 3 1 1 1 0 0 1 3 0 0 0 2 0 0 0 3 0 0 0 1 0 0 16 2 1532.7543 P35249 P35249 19 34 RFC4 Replication factor C subunit 4 yes yes 3 0.033471 71.263 By MS/MS 7 0 1 1 342190 342190 0 2696 816 2791 6377 5330 5330 1 5371.7 0 DRNENEIGHSR PMMRQQELIKGICVKDRNENEIGHSRRAAA ICVKDRNENEIGHSRRAAAIGITQVVISRI K D R S R R 0 2 2 1 0 0 2 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 11 1 1325.6072 Q96NB2 Q96NB2 208 218 SFXN2 Sideroflexin-2 yes yes 3 0.01427 94.402 By MS/MS 8 0 1 1 1906400 1906400 0 2697 2202 2792 6378 5331 5331 1 24068 0 DRPFFPGLVK RASEEHLKQHYIDLKDRPFFPGLVKYMNSG YIDLKDRPFFPGLVKYMNSGPVVAMVWEGL K D R V K Y 0 1 0 1 0 0 0 1 0 0 1 1 0 2 2 0 0 0 0 1 0 0 10 1 1174.6499 P22392;O60361 P22392 57 66 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 0.054007 75.378 By MS/MS 9.5 0.5 1 1 2 2629300 2629300 0 2698 692 2793 6379;6380 5332 5332 1 134250 0 DRPQEADGIDSVIVVDNVPQVGPDRLEK VDDVSEEELLGDVLKDRPQEADGIDSVIVV VVDNVPQVGPDRLEKLKNVIHKIFSKFGKI K D R E K L 1 2 1 5 0 2 2 2 0 2 1 1 0 0 3 1 0 0 0 5 0 0 28 2 3059.5524 P55884 P55884 175 202 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3;4 9.5387E-13 163.67 By MS/MS 4.75 0.829 2 1 1 4 3768900 3768900 0 2699 1065 2794 6381;6382;6383;6384 5333;5334 5334 2 217810 0 DRVTDALNATR LKVGGTSDVEVNEKKDRVTDALNATRAAVE NEKKDRVTDALNATRAAVEEGIVLGGGCAL K D R T R A 2 2 1 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 11 1 1230.6317 P10809 P10809 419 429 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0037685 116.74 By MS/MS 5.5 0.5 1 1 2 7678900 7678900 0 2700 569 2795 6385;6386 5335 5335 1 54807 0 DRYDSDRYR YPPRRGDDSFGDKYRDRYDSDRYRDGYRDG FGDKYRDRYDSDRYRDGYRDGYRDGPRRDM R D R Y R D 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 9 2 1244.5534 P23588 P23588 226 234 EIF4B Eukaryotic translation initiation factor 4B yes no 2;3 0.009227 105.1 By MS/MS 5.33 0.471 2 1 3 9700400 9700400 0 2701 708 2796 6387;6388;6389 5336;5337 5336 2 95526 0 DSAATTDEER FLGAENAFNLFVCQKDSAATTDEERQHLQE FVCQKDSAATTDEERQHLQEVGLFHLGEFV K D S E R Q 2 1 0 2 0 0 2 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 10 0 1093.4524 Q16531 Q16531 980 989 DDB1 DNA damage-binding protein 1 yes yes 2 0.0059061 103.55 By MS/MS 2 0 1 1 102210 102210 0 2702 1549 2797 6390 5338 5338 1 34571 0 DSAIQQQVANLQMK IEGEWGAFNDIMRRKDSAIQQQVANLQMKI KDSAIQQQVANLQMKIVQEDRAVESRTTDL K D S M K I 2 0 1 1 0 4 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 14 0 1572.793 Q14204 Q14204 1229 1242 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 6.3479E-24 279.9 By MS/MS 1.67 0.471 1 2 3 569830 569830 0 2703 1433 2798;2799 6391;6392;6393 5339;5340 5339 828 2 160440 0 DSALEFLTQLSR PVLQKRLCHPCWEVRDSALEFLTQLSRHWG EVRDSALEFLTQLSRHWGGQADFRCALLAS R D S S R H 1 1 0 1 0 1 1 0 0 0 3 0 0 1 0 2 1 0 0 0 0 0 12 0 1378.7092 Q6PJG6 Q6PJG6 518 529 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.00082005 128.51 By MS/MS 5 0 1 1 55814 55814 0 2704 1720 2800 6394 5341 5341 1 559.78 0 DSAQNSVIIVDK SKVWRDQHFVKIQVKDSAQNSVIIVDKNGR QVKDSAQNSVIIVDKNGRLVYLVENPGGYV K D S D K N 1 0 1 2 0 1 0 0 0 2 0 1 0 0 0 2 0 0 0 2 0 0 12 0 1287.667 P02786 P02786 194 205 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0010418 124.39 By MS/MS 3.5 0.5 1 1 2 1545300 1545300 0 2705 458 2801 6395;6396 5342;5343 5342 2 98337 0 DSAQTSVTQAQR LEILQQQLQVANEARDSAQTSVTQAQREKA EARDSAQTSVTQAQREKAELSRKVEELQAC R D S Q R E 2 1 0 1 0 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 12 0 1290.6164 Q14980 Q14980 632 643 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 2 5.3696E-05 166.29 By MS/MS 2 0 1 1 200030 200030 0 2706 1463 2802 6397 5344 5344 1 67659 0 DSAVAISGADSR EDSSPPASSESSSTRDSAVAISGADSRGIL STRDSAVAISGADSRGILEEPLPSTSSEEE R D S S R G 3 1 0 2 0 0 0 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 12 0 1147.5469 Q7Z6Z7 Q7Z6Z7 2930 2941 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 7.0858E-05 160.91 By MS/MS 1 0 1 1 232680 232680 0 2707 1802 2803 6398 5345 5345 1 56068 0 DSAYQSITHYRPVSASR SEEECKDRERPMYGRDSAYQSITHYRPVSA AYQSITHYRPVSASRSSLDLSYYPTSSSTS R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402 P50402 158 174 EMD Emerin yes yes 3 0.010879 83.729 By MS/MS 8.5 1.12 1 1 1 1 4 23623000 23623000 0 2708 973 2804 6399;6400;6401;6402 5346;5347;5348;5349 5347 4 371830 0 DSCPLDCK ______________________________ ______________________________ R D S C K V 0 0 0 2 2 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 993.38957 P84103 P84103 4 11 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 2 0.029286 90.37 By MS/MS 9 0 1 1 395710 395710 0 2709 1248 2805 6403 5350 5350 1 7787.6 0 DSDAGSSTPTTSTR EEEVRQKKSSRKRKRDSDAGSSTPTTSTRS RDSDAGSSTPTTSTRSRDKDDESKKQKKRG R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 P51532 P51532 1416 1429 SMARCA4 Transcription activator BRG1 yes yes 2 8.1159E-17 262.07 By MS/MS 2 0 1 1 282820 282820 0 2710 995 2806 6404 5351 5351 1 95661 0 DSDEADLVLAK ATDSSGELMFLMKWKDSDEADLVLAKEANM MKWKDSDEADLVLAKEANMKCPQIVIAFYE K D S A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1174.5717 Q13185 Q13185 144 154 CBX3 Chromobox protein homolog 3 yes yes 2 0.011237 100.25 By MS/MS 9 0 1 1 351500 351500 0 2711 1362 2807 6405 5352 5352 0 6917.5 0 DSEEAEIIRK VNYEKLKTDIKVVDRDSEEAEIIRKYVKNT KVVDRDSEEAEIIRKYVKNTHATTHNAYDL R D S R K Y 1 1 0 1 0 0 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 10 1 1188.5986 P09874 P09874 807 816 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.036403 93.598 By MS/MS 4 0 1 1 0 0 0 2712 543 2808 6406 5353 5353 1 0 0 DSFLGSIPGK KPGLEEAVESACAMRDSFLGSIPGKNAAEY ACAMRDSFLGSIPGKNAAEYKVITVIEPGL R D S G K N 0 0 0 1 0 0 0 2 0 1 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1019.5288 Q9NSE4 Q9NSE4 887 896 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0073726 100.25 By MS/MS 4 0 1 1 1821100 1821100 0 2713 2570 2809 6407 5354 5354 1 171380 0 DSFPNFLACK DYCAHHLIRLLKCKRDSFPNFLACKQERHD LKCKRDSFPNFLACKQERHDWDYCEHRDYV R D S C K Q 1 0 1 1 1 0 0 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 10 0 1197.5488 P17568 P17568 72 81 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 2 0.00069986 129.42 By MS/MS 9 0 1 1 151020 151020 0 2714 643 2810 6408 5355 5355 1 2972.1 0 DSGEDVSSPK MIGQDDRNMQITINRDSGEDVSSPKHGKED ITINRDSGEDVSSPKHGKEDPDNMPHVGGN R D S P K H 0 0 0 2 0 0 1 1 0 0 0 1 0 0 1 3 0 0 0 1 0 0 10 0 1019.4407 A3KMH1 A3KMH1 1543 1552 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0014095 115.7 By MS/MS 2 0 1 1 104370 104370 0 2715 14 2811 6409 5356 5356 1 35303 0 DSGITYLGIK GRSFMHVNTNANFYKDSGITYLGIKANDTQ ANFYKDSGITYLGIKANDTQEFNLSAYFER K D S I K A 0 0 0 1 0 0 0 2 0 2 1 1 0 0 0 1 1 0 1 0 0 0 10 0 1065.5706 P51452 P51452 80 89 DUSP3 Dual specificity protein phosphatase 3 yes yes 2 3.3204E-05 159.28 By MS/MS 9.5 0.5 1 1 2 659140 659140 0 2716 994 2812 6410;6411 5357 5357 1 17497 0 DSGNIPEAIASYR PAFADAHSNLASIHKDSGNIPEAIASYRTA HKDSGNIPEAIASYRTALKLKPDFPDAYCN K D S Y R T 2 1 1 1 0 0 1 1 0 2 0 0 0 0 1 2 0 0 1 0 0 0 13 0 1391.6681 O15294 O15294 441 453 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.00079943 129.74 By MS/MS 4 0 1 1 803020 803020 0 2717 179 2813 6412 5358 5358 1 75570 0 DSGPLFNTDYDILK TASIHVYSIQKAMLKDSGPLFNTDYDILKS KDSGPLFNTDYDILKSNLQNCSKFSAIQCA K D S L K S 0 0 1 3 0 0 0 1 0 1 2 1 0 1 1 1 1 0 1 0 0 0 14 0 1596.7672 Q15054 Q15054 110 123 POLD3 DNA polymerase delta subunit 3 yes yes 2 1.3892E-05 199.12 By MS/MS 5 0 1 1 187880 187880 0 2718 1484 2814 6413 5359 5359 1 1884.4 0 DSGSFLLR QRLLDRLVRRYAETKDSGSFLLRNLKDSER RRYAETKDSGSFLLRNLKDSERMQLLLTLA K D S L R N 0 1 0 1 0 0 0 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 8 0 893.46068 Q8NDZ4 Q8NDZ4 188 195 C3orf58 Deleted in autism protein 1 yes yes 2 0.0001415 173.68 By MS/MS 7 0 1 1 751930 751930 0 2719 1957 2815 6414 5360 5360 1 11804 0 DSGVVPVGTEEAPK ______________________________ RDSGVVPVGTEEAPKVFKMAASMHGQPSPS R D S P K V 1 0 0 1 0 0 2 2 0 0 0 1 0 0 2 1 1 0 0 3 0 0 14 0 1383.6882 Q8IUX1 Q8IUX1 14 27 TMEM126B Complex I assembly factor TMEM126B, mitochondrial yes yes 2 0.00010995 179.19 By MS/MS 8.5 0.5 1 1 2 1055600 1055600 0 2720 1861 2816 6415;6416 5361 5361 1 19495 0 DSHGVAQVR AKKGLTPSQIGVILRDSHGVAQVRFVTGNK IGVILRDSHGVAQVRFVTGNKILRILKSKG R D S V R F 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 2 0 0 9 0 967.48354 P62277 P62277 56 64 RPS13 40S ribosomal protein S13 yes yes 2;3 0.011034 111.74 By MS/MS By matching 9.4 0.49 3 2 4 1 27573000 27433000 140820 2721 1151 2817 6417;6418;6419;6420;6421 5362;5363;5364;5365 5363 4 1029100 321110 DSIEKEHVEEISELFYDAK QLLTPANLLAKINGKDSIEKEHVEEISELF KEHVEEISELFYDAKSSAKILADQQDKYMK K D S A K S 1 0 0 2 0 0 5 0 1 2 1 2 0 1 0 2 0 0 1 1 0 0 19 1 2280.0798 Q9Y265 Q9Y265 423 441 RUVBL1 RuvB-like 1 yes yes 3 4.8241E-05 175.8 By MS/MS 6 0 1 1 2233200 2233200 0 2722 2815 2818 6422 5366 5366 1 15352 0 DSIVAELDR AVRMFADYLAHESRRDSIVAELDREMSRSV AHESRRDSIVAELDREMSRSVDVTNTTFLL R D S D R E 1 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1016.5138 O14579 O14579 98 106 COPE Coatomer subunit epsilon yes yes 2 0.00081181 137.13 By MS/MS 8 0 1 1 3479000 3479000 0 2723 127 2819 6423 5367 5367 1 43921 0 DSIVAELDREMSR AVRMFADYLAHESRRDSIVAELDREMSRSV RRDSIVAELDREMSRSVDVTNTTFLLMAAS R D S S R S 1 2 0 2 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 1 0 0 13 1 1519.7301 O14579 O14579 98 110 COPE Coatomer subunit epsilon yes yes 2;3 0.0056269 123.62 By MS/MS 8 0 2 2 2321600 2321600 0 2724 127 2820 6424;6425 5368;5369 5368 2 29310 0 DSIVQGFQWGTR TLPSEVDKALLGSVKDSIVQGFQWGTREGP SVKDSIVQGFQWGTREGPLCDELIRNVKFK K D S T R E 0 1 0 1 0 2 0 2 0 1 0 0 0 1 0 1 1 1 0 1 0 0 12 0 1392.6786 Q15029 Q15029 764 775 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0010559 124.12 By MS/MS 4 0 1 1 1095200 1095200 0 2725 1476 2821 6426 5370 5370 1 103070 0 DSLDQFDCK LEIRAVMEQIPEIQKDSLDQFDCKLLNPSL IPEIQKDSLDQFDCKLLNPSLQKVADKRRK K D S C K L 0 0 0 3 1 1 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1126.4601 Q9HAV4 Q9HAV4 1124 1132 XPO5 Exportin-5 yes yes 2 0.011601 97.635 By MS/MS 3 0 1 1 408490 408490 0 2726 2495 2822 6427 5371 5371 1 7474.3 0 DSLENTLTESEAR VNALEIELQAQHNLRDSLENTLTESEARYS LRDSLENTLTESEARYSSQLSQVQSLITNV R D S A R Y 1 1 1 1 0 0 3 0 0 0 2 0 0 0 0 2 2 0 0 0 0 0 13 0 1463.674 CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009;Q14532;CON__Q14532 CON__Q9UE12 294 306 KRT31;KRT33A;KRT32 Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha2 yes no 2 7.5453E-29 267.07 By MS/MS 10 0 1 1 191190 0 191190 + 2727 61 2823 6428 5372 5372 1 0 244770 DSLHQPQYVEK AEWIQQNNILSIVLRDSLHQPQYVEKLEKI IVLRDSLHQPQYVEKLEKILRFVIKEKALT R D S E K L 0 0 0 1 0 2 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 11 0 1342.6517 Q93008 Q93008 402 412 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 0.0032766 133.42 By MS/MS 2.75 0.829 2 1 1 4 1265200 1265200 0 2728 2085 2824 6429;6430;6431;6432 5373;5374 5374 2 349910 0 DSLHQPQYVEKLEK AEWIQQNNILSIVLRDSLHQPQYVEKLEKI RDSLHQPQYVEKLEKILRFVIKEKALTLQD R D S E K I 0 0 0 1 0 2 2 0 1 0 2 2 0 0 1 1 0 0 1 1 0 0 14 1 1712.8733 Q93008 Q93008 402 415 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.025953 71.529 By MS/MS 2 0 1 1 568750 568750 0 2729 2085 2825 6433 5375 5375 1 192370 0 DSLIFLVDASK EENLEASGDYKYSGRDSLIFLVDASKAMFE YSGRDSLIFLVDASKAMFESQSEDELTPFD R D S S K A 1 0 0 2 0 0 0 0 0 1 2 1 0 1 0 2 0 0 0 1 0 0 11 0 1206.6496 P12956 P12956 36 46 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 3.2132E-09 212.21 By MS/MS 5 0 1 1 1267500 1267500 0 2730 596 2826 6434 5376 5376 1 12712 0 DSLIIIDELGR AEMLETASILRSATKDSLIIIDELGRGTST SATKDSLIIIDELGRGTSTYDGFGLAWAIS K D S G R G 0 1 0 2 0 0 1 1 0 3 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1242.682 P43246 P43246 742 752 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.00014069 148.32 By MS/MS 4 0 1 1 386560 386560 0 2731 894 2827 6435 5377 5377 1 36378 0 DSLILPFQFSSEK LTFNLHLSKKEREARDSLILPFQFSSEKQQ ARDSLILPFQFSSEKQQALLRPRPGQATSH R D S E K Q 0 0 0 1 0 1 1 0 0 1 2 1 0 2 1 3 0 0 0 0 0 0 13 0 1509.7715 Q8TE02 Q8TE02 267 279 ELP5 Elongator complex protein 5 yes yes 2 0.0076825 113.63 By MS/MS 7 0 1 1 127420 127420 0 2732 1998 2828 6436 5378 5378 1 2000.3 0 DSLINLK YLAVRPFLPKKKQQKDSLINLKIQKENPKV LPKKKQQKDSLINLKIQKENPKVVNEINIE K D S L K I 0 0 1 1 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 801.45962 Q8N5K1 Q8N5K1 68 74 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 0.011789 130.77 By MS/MS 10 0 1 1 2693400 2693400 0 2733 1923 2829 6437 5379 5379 1 145170 0 DSLLQDGEFSMDLR VNGLTLGGQKCSVIRDSLLQDGEFSMDLRT RDSLLQDGEFSMDLRTKSTGGAPTFNVTVT R D S L R T 0 1 0 3 0 1 1 1 0 0 3 0 1 1 0 2 0 0 0 0 0 0 14 0 1624.7403 P07737 P07737 76 89 PFN1 Profilin-1 yes yes 2 7.0667E-24 278.38 By MS/MS 10 0 1 1 399510 399510 0 2734 510 2830 6438 5380;5381 5380 212 2 21532 0 DSLTLVFVETK DKRSFLLDLLNATGKDSLTLVFVETKKGAD ATGKDSLTLVFVETKKGADSLEDFLYHEGY K D S T K K 0 0 0 1 0 0 1 0 0 0 2 1 0 1 0 1 2 0 0 2 0 0 11 0 1250.6758 O00571 O00571 441 451 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 1.7804E-06 208.25 By MS/MS 5 0 1 1 554570 554570 0 2735 116 2831 6439 5382 5382 1 5562 0 DSLTLVFVETKK DKRSFLLDLLNATGKDSLTLVFVETKKGAD TGKDSLTLVFVETKKGADSLEDFLYHEGYA K D S K K G 0 0 0 1 0 0 1 0 0 0 2 2 0 1 0 1 2 0 0 2 0 0 12 1 1378.7708 O00571 O00571 441 452 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.00074472 149.33 By MS/MS 5 0 1 1 601270 601270 0 2736 116 2832 6440 5383 5383 1 6030.4 0 DSLVDIIGICK QFDFTGIDDLENKSKDSLVDIIGICKSYED NKSKDSLVDIIGICKSYEDATKITVRSNNR K D S C K S 0 0 0 2 1 0 0 1 0 3 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1231.6482 P27694 P27694 314 324 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 1.3488E-06 186.41 By MS/MS 5 0 1 1 947330 947330 0 2737 744 2833 6441 5384 5384 1 9501.3 0 DSLYAQGK GKHQPHKVTQYKKGKDSLYAQGKRRYDRKQ TQYKKGKDSLYAQGKRRYDRKQSGYGGQTK K D S G K R 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 880.42905 P83881 P83881 31 38 RPL36A 60S ribosomal protein L36a yes yes 2 0.00178 145.34 By MS/MS 9.5 0.5 1 1 2 1900800 1900800 0 2738 1242 2834 6442;6443 5385;5386 5386 2 90874 0 DSNFAGDLVR RAGEKGVAYTLLTPKDSNFAGDLVRNLEGA LLTPKDSNFAGDLVRNLEGANQHVSKELLD K D S V R N 1 1 1 2 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 10 0 1092.52 Q86XP3 Q86XP3 606 615 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.00038299 135.55 By MS/MS 3.5 0.5 1 1 2 764690 764690 0 2739 1846 2835 6444;6445 5387 5387 1 39690 0 DSNVLSVIIK RKEQIPLKPKEKRERDSNVLSVIIKGDVDG EKRERDSNVLSVIIKGDVDGSVEAILNIID R D S I K G 0 0 1 1 0 0 0 0 0 2 1 1 0 0 0 2 0 0 0 2 0 0 10 0 1086.6285 P46199 P46199 512 521 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 8.4724E-08 194.06 By MS/MS 5 0 1 1 695920 695920 0 2740 910 2836 6446 5388 5388 1 6979.7 0 DSPDLLLLLR VRHLQELVGQETLPRDSPDLLLLLRLLALG ETLPRDSPDLLLLLRLLALGQGAWDMIDSQ R D S L R L 0 1 0 2 0 0 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 10 0 1153.6707 Q8WX92 Q8WX92 334 343 NELFB Negative elongation factor B yes yes 2 0.00017955 148.52 By MS/MS 5.5 0.5 1 1 2 468950 468950 0 2741 2038 2837 6447;6448 5389;5390 5389 2 4490.6 0 DSPFGLSFVR RWDRVKIVCSQPYSKDSPFGLSFVRFHSPP QPYSKDSPFGLSFVRFHSPPDKDEAEAPSQ K D S V R F 0 1 0 1 0 0 0 1 0 0 1 0 0 2 1 2 0 0 0 1 0 0 10 0 1123.5662 P18887 P18887 139 148 XRCC1 DNA repair protein XRCC1 yes yes 2 0.0010691 122.28 By MS/MS 4.5 0.5 1 1 2 249750 249750 0 2742 658 2838 6449;6450 5391;5392 5391 2 13165 0 DSPLLLQQISAMR PGQAPGSVPGPGLVKDSPLLLQQISAMRLH VKDSPLLLQQISAMRLHISQLQHENSILKG K D S M R L 1 1 0 1 0 2 0 0 0 1 3 0 1 0 1 2 0 0 0 0 0 0 13 0 1470.7864 Q14203 Q14203 1089 1101 DCTN1 Dynactin subunit 1 yes yes 2 0.00026215 155.33 By MS/MS 3 0 1 1 176240 176240 0 2743 1432 2839 6451 5393;5394 5393 825 2 3224.7 0 DSPQPVEEK LNRKYHTTRKLSTTKDSPQPVEEKVGAFTK KLSTTKDSPQPVEEKVGAFTKIIEAMGFTG K D S E K V 0 0 0 1 0 1 2 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 9 0 1027.4822 Q9NVA1 Q9NVA1 81 89 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 2 0.0026023 113.66 By MS/MS By matching 8.67 0.471 1 2 1 2 756180 724020 32159 2744 2591 2840 6452;6453;6454 5395 5395 1 14249 58631 DSQADDPENIKTQELFR HLKKAENAWKPSQKRDSQADDPENIKTQEL QADDPENIKTQELFRKVRSILNKLTPQMFN R D S F R K 1 1 1 3 0 2 2 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 17 1 2004.9389 O43432 O43432 740 756 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 3 0.00038811 125.22 By MS/MS 2.5 0.5 1 1 2 951030 951030 0 2745 210 2841 6455;6456 5396 5396 1 292050 0 DSQDGSSYR RMGPSGGEGMEPERRDSQDGSSYRRPLEQQ MEPERRDSQDGSSYRRPLEQQQPHHIPTSA R D S Y R R 0 1 0 2 0 1 0 1 0 0 0 0 0 0 0 3 0 0 1 0 0 0 9 0 1013.405 Q14847 Q14847 145 153 LASP1 LIM and SH3 domain protein 1 yes yes 2 0.0213 88.37 By MS/MS 7 0 1 1 317310 317310 0 2746 1460 2842 6457 5397 5397 1 4981.2 0 DSQLYAVDYETLTR ARRVRALREQLNRPRDSQLYAVDYETLTRP RDSQLYAVDYETLTRPFSGRRLPVRAWADV R D S T R P 1 1 0 2 0 1 1 0 0 0 2 0 0 0 0 1 2 0 2 1 0 0 14 0 1672.7944 P82930 P82930 30 43 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 1.9025E-43 320.07 By MS/MS 8 0 1 1 677530 677530 0 2747 1237 2843 6458 5398 5398 1 8553.8 0 DSQTQAILTK KAESTPEIAEQRGERDSQTQAILTKLKCAA QRGERDSQTQAILTKLKCAAGLAELAARKY R D S T K L 1 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1103.5823 Q13098 Q13098 239 248 GPS1 COP9 signalosome complex subunit 1 yes yes 2 0.0085778 113.44 By MS/MS 6 0 1 1 2126000 2126000 0 2748 1352 2844 6459 5399 5399 0 14615 0 DSQVVQVVLDGLK QQNVIPPFCNLLSVKDSQVVQVVLDGLKNI VKDSQVVQVVLDGLKNILIMAGDEASTIAE K D S L K N 0 0 0 2 0 2 0 1 0 0 2 1 0 0 0 1 0 0 0 4 0 0 13 0 1398.7718 O00505 O00505 424 436 KPNA3 Importin subunit alpha-4 yes yes 2 0.00012274 184.98 By MS/MS 6 0 1 1 412310 412310 0 2749 111 2845 6460 5400 5400 1 2834.3 0 DSSNVEEAFLR AEHYDILCAIETSAKDSSNVEEAFLRVATE TSAKDSSNVEEAFLRVATELIMRHGGPLFS K D S L R V 1 1 1 1 0 0 2 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 0 1265.5888 Q86YS6 Q86YS6 165 175 RAB43 Ras-related protein Rab-43 yes yes 2 7.2764E-06 194.94 By MS/MS 9 0 1 1 358960 358960 0 2750 1854 2846 6461 5401 5401 1 7064.5 0 DSSNVEEAFLRVATELIMR AEHYDILCAIETSAKDSSNVEEAFLRVATE VEEAFLRVATELIMRHGGPLFSEKSPDHIQ K D S M R H 2 2 1 1 0 0 3 0 0 1 2 0 1 1 0 2 1 0 0 2 0 0 19 1 2179.0943 Q86YS6 Q86YS6 165 183 RAB43 Ras-related protein Rab-43 yes yes 5 0.05301 29.274 By MS/MS 5 0 1 1 695250 695250 0 2751 1854 2847 6462 5402 5402 1 6973 0 DSSTEKLLQK KSCAFAMGHLVRTSRDSSTEKLLQKLNGWY VRTSRDSSTEKLLQKLNGWYMEKEEPIYKT R D S Q K L 0 0 0 1 0 1 1 0 0 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1147.6085 Q5VYK3 Q5VYK3 1433 1442 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0030204 123.35 By MS/MS 2 0 1 1 0 0 0 2752 1656 2848 6463 5403 5403 1 0 0 DSSVEVR FGVRQKWDQKSQKPRDSSVEVRSDWEVKEE DQKSQKPRDSSVEVRSDWEVKEEMDFPQLM R D S V R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 7 0 790.3821 O15371 O15371 159 165 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.048731 90.777 By MS/MS By matching 6.33 0.471 2 1 2 1 2022800 1978900 43977 2753 185 2849 6464;6465;6466 5404 5404 1 26151 45064 DSTDISAVLGTK FSKISIVRPFSIETKDSTDISAVLGTKAAH ETKDSTDISAVLGTKAAHGCVTAVSGKALP K D S T K A 1 0 0 2 0 0 0 1 0 1 1 1 0 0 0 2 2 0 0 1 0 0 12 0 1205.6139 O75410 O75410 158 169 TACC1 Transforming acidic coiled-coil-containing protein 1 yes yes 2 0.00073987 130.01 By MS/MS 3 0 1 1 158600 158600 0 2754 324 2850 6467 5405 5405 1 2901.9 0 DSTEVEISTGER IHLMNIVSSAGSLERDSTEVEISTGERKGS LERDSTEVEISTGERKGSWSERRNSSIVGR R D S E R K 0 1 0 1 0 0 3 1 0 1 0 0 0 0 0 2 2 0 0 1 0 0 12 0 1321.5998 Q96N67 Q96N67 418 429 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 5.1521E-05 166.97 By MS/MS 2 0.816 1 1 1 3 3466900 3466900 0 2755 2201 2851 6468;6469;6470 5406;5407;5408 5408 2 973790 0 DSTGAADPPQPHIVGIQSPDQQAALAR DLSARVTIYQVPLPKDSTGAADPPQPHIVG IVGIQSPDQQAALARHNPARPVFVEGPFSL K D S A R H 5 1 0 3 0 4 0 2 1 2 1 0 0 0 4 2 1 0 0 1 0 0 27 0 2739.3576 Q9BQ95 Q9BQ95 252 278 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 3 3.7327E-13 136.11 By MS/MS 6.5 0.5 1 1 2 1900300 1900300 0 2756 2285 2852 6471;6472 5409 5409 1 23164 0 DSTLIMQLLR DAIAELDTLSEESYKDSTLIMQLLRDNLTL EESYKDSTLIMQLLRDNLTLWTSDMQGDGE K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 P27348;P63104;P61981;Q04917;P62258;P31947;P31946 P62258 216 225 YWHAQ;YWHAZ;YWHAG;YWHAH;YWHAE;SFN;YWHAB 14-3-3 protein theta;14-3-3 protein zeta/delta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein epsilon;14-3-3 protein sigma;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 2 1.1922E-05 172.94 By MS/MS 8 0 2 2 207300 207300 0 2757 1146;1195;739;1136;1294;793;794 2853;2854 6473;6474 5410;5411;5412 5411 368 3 2617.2 0 DSTLTEPVVMALLK YHPQLAYCVVQFLEKDSTLTEPVVMALLKY KDSTLTEPVVMALLKYWPKTHSPKEVMFLN K D S L K Y 1 0 0 1 0 0 1 0 0 0 3 1 1 0 1 1 2 0 0 2 0 0 14 0 1515.8218 Q13362 Q13362 278 291 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 2 0.0071095 98.04 By MS/MS 6 0 1 1 90830 90830 0 2758 1373 2855 6475 5413 5413 1 624.39 0 DSTQAEEDLSEQEQNQLNVLKK PTPYRMFKRHQRLKKDSTQAEEDLSEQEQN DLSEQEQNQLNVLKKHGYVVGRVGRTFLYS K D S K K H 1 0 2 2 0 4 4 0 0 0 3 2 0 0 0 2 1 0 0 1 0 0 22 1 2545.2144 Q8NC60 Q8NC60 410 431 NOA1 Nitric oxide-associated protein 1 yes yes 3 0.00771 71.592 By MS/MS 5 0 1 1 1486700 1486700 0 2759 1949 2856 6476 5414 5414 1 14911 0 DSVFLSCSEDNR AHAAQVTCVAASPHKDSVFLSCSEDNRILL PHKDSVFLSCSEDNRILLWDTRCPKPASQI K D S N R I 0 1 1 2 1 0 1 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 12 0 1427.5987 Q9BQA1 Q9BQA1 180 191 WDR77 Methylosome protein 50 yes yes 2 6.9027E-28 256.38 By MS/MS By MS/MS 7.33 0.471 2 1 1 2 2007700 1628800 378910 2760 2286 2857 6477;6478;6479 5415;5416;5417 5415 3 25570 639300 DSVGQLQLYR PVKAVPIQPPGPPERDSVGQLQLYRHPDRS GPPERDSVGQLQLYRHPDRSQPAFLDAIDR R D S Y R H 0 1 0 1 0 2 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1177.6091 Q99941 Q99941 563 572 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.0021026 112.11 By MS/MS 3.5 0.5 1 1 2 740830 740830 0 2761 2272 2858 6480;6481 5418 5418 1 60052 0 DSVVLSLLK VSTGEFTDLKQQLERDSVVLSLLKQLQEFS KQQLERDSVVLSLLKQLQEFSTAIEEYNCA R D S L K Q 0 0 0 1 0 0 0 0 0 0 3 1 0 0 0 2 0 0 0 2 0 0 9 0 972.58555 O43264 O43264 102 110 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 8.2117E-08 201.39 By MS/MS 4.5 0.5 1 1 2 2003800 2003800 0 2762 200 2859 6482;6483 5419;5420 5419 2 180100 0 DSYLILETLPTEYDSR DAEKLKPGDLVGVNKDSYLILETLPTEYDS SYLILETLPTEYDSRVKAMEVDERPTEQYS K D S S R V 0 1 0 2 0 0 2 0 0 1 3 0 0 0 1 2 2 0 2 0 0 0 16 0 1913.9258 P17980 P17980 156 171 PSMC3 26S protease regulatory subunit 6A yes yes 2 3.3883E-14 248.32 By MS/MS 6.5 0.5 1 1 2 3023600 3023600 0 2763 647 2860 6484;6485 5421;5422 5422 2 21376 0 DSYNLLLVAAR QVWRLMLSLGLQPSRDSYNLLLVAARDCGL QPSRDSYNLLLVAARDCGLGDPQVASELLL R D S A R D 2 1 1 1 0 0 0 0 0 0 3 0 0 0 0 1 0 0 1 1 0 0 11 0 1233.6717 O75127 O75127 320 330 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 1.0436E-06 198.61 By MS/MS 5 0 1 1 820950 820950 0 2764 293 2861 6486 5423 5423 1 8233.7 0 DSYVGDEAQSK GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL MGQKDSYVGDEAQSKRGILTLKYPIEHGIV K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P60709;P63267;P68133;P68032;P62736;P63261 P63261 51 61 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 1.7276E-18 255.39 By MS/MS By MS/MS 8 1.2 4 2 1 5 2 43833000 43673000 159560 2765 1095;1203 2862 6487;6488;6489;6490;6491;6492;6493 5424;5425;5426;5427;5428;5429;5430 5426 6 699020 324060 DSYVGDEAQSKR GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL GQKDSYVGDEAQSKRGILTLKYPIEHGIVT K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P60709;P63267;P68133;P68032;P62736;P63261 P63261 51 62 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 3.4723E-08 192.44 By MS/MS By MS/MS 8 1.22 2 1 1 3 1 29692000 29061000 630540 2766 1095;1203 2863 6494;6495;6496;6497 5431;5432;5433 5431 3 462330 1135600 DTAASGYGTQNIR NCTAGAVYTYHEKKKDTAASGYGTQNIRLS KKDTAASGYGTQNIRLSRDAVKDFDCCCLS K D T I R L 2 1 1 1 0 1 0 2 0 1 0 0 0 0 0 1 2 0 1 0 0 0 13 0 1352.6321 Q9Y314 Q9Y314 22 34 NOSIP Nitric oxide synthase-interacting protein yes yes 2 6.8927E-17 252.14 By MS/MS 8 0 1 1 965910 965910 0 2767 2854 2864 6498 5434 5434 1 12195 0 DTAAWTVGR PTLIELMKDPSVVVRDTAAWTVGRICELLP PSVVVRDTAAWTVGRICELLPEAAINDVYL R D T G R I 2 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 2 1 0 1 0 0 9 0 975.47739 Q14974 Q14974 426 434 KPNB1 Importin subunit beta-1 yes yes 2 5.0348E-05 171.53 By MS/MS 4 0 1 1 1453200 1453200 0 2768 1462 2865 6499 5435 5435 1 136760 0 DTALETALNAK FQRQLRQEVVVCMRRDTALETALNAKAYKR CMRRDTALETALNAKAYKRSKRQSLREARI R D T A K A 3 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1145.5928 P51532 P51532 427 437 SMARCA4 Transcription activator BRG1 yes yes 2 1.1294E-06 189.18 By MS/MS 2 0 1 1 642390 642390 0 2769 995 2866 6500 5436 5436 1 217280 0 DTASLSTTPSESPR IPDSIISRGVQVLPRDTASLSTTPSESPRA RDTASLSTTPSESPRAQATSRLSTASCPTP R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 Q9NQX3 Q9NQX3 259 272 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 2 3.4067E-07 208.72 By MS/MS 4.5 0.5 1 1 2 1234000 1234000 0 2770 2542 2867 6501;6502 5437 5437 1 103900 0 DTDIVDEAIYYFK PIRSQFKGPAPRETKDTDIVDEAIYYFKAN TKDTDIVDEAIYYFKANVFFKNYEIKNEAD K D T F K A 1 0 0 3 0 0 1 0 0 2 0 1 0 1 0 0 1 0 2 1 0 0 13 0 1590.7454 O15145 O15145 38 50 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 2 0.00016526 166.55 By MS/MS 9 0 1 1 62517 62517 0 2771 164 2868 6503 5438 5438 1 1230.3 0 DTEEALLINLR RDQYLRVQKDIFILKDTEEALLINLRDSQV FILKDTEEALLINLRDSQVLQHKENLEWNW K D T L R D 1 1 1 1 0 0 2 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1285.6878 Q6R327 Q6R327 523 533 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.0012037 117.53 By MS/MS 2 0 1 1 54492 54492 0 2772 1724 2869 6504 5439;5440 5440 2 18431 0 DTEPLIQTAK EHLDKISDSVLVDIKDTEPLIQTAKTTLGS LVDIKDTEPLIQTAKTTLGSKVVNSCHRQM K D T A K T 1 0 0 1 0 1 1 0 0 1 1 1 0 0 1 0 2 0 0 0 0 0 10 0 1114.587 P48643 P48643 161 170 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.024743 98.582 By matching By MS/MS 6 0 2 1 1 1862400 1797800 64619 2773 940 2870 6505;6506 5441 5441 1 12358 66216 DTGDIFCTR PGVDKEPFNLFYIEKDTGDIFCTRSIDREK LFYIEKDTGDIFCTRSIDREKYEQFALYGY K D T T R S 0 1 0 2 1 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 9 0 1083.4655 Q08554 Q08554 190 198 DSC1 Desmocollin-1 yes yes 2 5.4319E-05 178.94 By MS/MS 3 0.816 1 1 1 3 655650 0 655650 2774 1311 2871 6507;6508;6509 5442 5442 1 0 261740 DTGEKLTVAENEAETK GPRDMKSCQFVAVRRDTGEKLTVAENEAET TGEKLTVAENEAETKLQAILEDIQVTLFTR R D T T K L 2 0 1 1 0 0 4 1 0 0 1 2 0 0 0 0 3 0 0 1 0 0 16 1 1733.8319 P07814 P07814 1385 1400 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 6.3364E-11 252.2 By MS/MS 3.5 0.5 1 1 2 1183400 1183400 0 2775 512 2872 6510;6511 5443 5443 1 42810 0 DTGKTPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 P60866 P60866 5 19 RPS20 40S ribosomal protein S20 yes yes 2;3;4 1.8123E-07 215.96 By MS/MS By MS/MS 9.62 0.696 1 1 6 7 1 57089000 57029000 60593 2776 1098 2873 6512;6513;6514;6515;6516;6517;6518;6519 5444;5445;5446;5447;5448;5449 5445 6 3037700 77576 DTGKTPVEPEVAIHRIR ______________________________ GKTPVEPEVAIHRIRITLTSRNVKSLEKVC K D T I R I 1 2 0 1 0 0 2 1 1 2 0 1 0 0 2 0 2 0 0 2 0 0 17 2 1917.0432 P60866 P60866 5 21 RPS20 40S ribosomal protein S20 yes yes 4 0.013855 70.373 By MS/MS 10 0 1 1 343720 343720 0 2777 1098 2874 6520 5450 5450 1 18525 0 DTGLGLSPTASLR DTITEWKAGALCLSRDTGLGLSPTASLRVF SRDTGLGLSPTASLRVFQPFFVELTMPYSV R D T L R V 1 1 0 1 0 0 0 2 0 0 3 0 0 0 1 2 2 0 0 0 0 0 13 0 1286.683 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 780 792 yes yes 2 0.0013358 120.06 By MS/MS 5.5 4.03 1 1 1 1 4 1176300 1176300 0 + 2778 32 2875 6521;6522;6523;6524 5451;5452;5453 5452 3 98688 0 DTGQIFAMKMLHKWEMLK IGRGAFGEVTVVRQRDTGQIFAMKMLHKWE QIFAMKMLHKWEMLKRAETACFREERDVLV R D T L K R 1 0 0 1 0 1 1 1 1 1 2 3 3 1 0 0 1 1 0 0 0 0 18 2 2206.1101 Q6DT37 Q6DT37 92 109 CDC42BPG Serine/threonine-protein kinase MRCK gamma yes yes 3 0.049778 50.305 By matching By MS/MS 2 0 2 1 1 268840 85635 183210 2779 1677 2876 6525;6526 5454 5454 905;906 1 28965 259090 DTHDGAFYR GQWDSMEEYTCMIPRDTHDGAFYRAVLALH TCMIPRDTHDGAFYRAVLALHQDLFSLAQQ R D T Y R A 1 1 0 2 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 0 9 0 1080.4625 P42345 P42345 1539 1547 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.041299 79.713 By MS/MS 2 0 1 1 340410 340410 0 2780 879 2877 6527 5455 5455 1 115140 0 DTHKSEIAHR LLLFSSAYSRGVFRRDTHKSEIAHRFKDLG GVFRRDTHKSEIAHRFKDLGEEHFKGLVLI R D T H R F 1 1 0 1 0 0 1 0 2 1 0 1 0 0 0 1 1 0 0 0 0 0 10 1 1192.5949 CON__P02769 CON__P02769 25 34 yes yes 2;3 0.0010776 145.9 By MS/MS 5.5 0.5 2 2 4 1831800 1831800 0 + 2781 43 2878 6528;6529;6530;6531 5456;5457;5458;5459 5458 4 17186 0 DTLGLFLR TGKTARAIRDMCLEKDTLGLFLREGSASTE RDMCLEKDTLGLFLREGSASTEVLRTEAEQ K D T L R E 0 1 0 1 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 8 0 933.52837 O75643 O75643 746 753 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.015888 104.21 By MS/MS 1.5 0.5 1 1 2 118510 118510 0 2782 340 2879 6532;6533 5460 5460 1 36458 0 DTLMISR LLGGPSVFLFPPKPKDTLMISRTPEVTCVV FLFPPKPKDTLMISRTPEVTCVVVDVSHED K D T S R T 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 7 0 834.42694 P0DOX5;P01857;P01860;P01861;P01859 P0DOX5 251 257 IGHG1;IGHG3;IGHG4;IGHG2 Ig gamma-1 chain C region;Ig gamma-3 chain C region;Ig gamma-4 chain C region;Ig gamma-2 chain C region no no 2 0.050875 98.418 By MS/MS 1.5 0.5 1 1 2 162230 0 162230 2783 453;454 2880 6534;6535 5461 5461 172 1 0 193980 DTLQSELVGQLYK SVPKAVMHFLVNHVKDTLQSELVGQLYKSS VKDTLQSELVGQLYKSSLLDDLLTESEDMA K D T Y K S 0 0 0 1 0 2 1 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 13 0 1492.7773 O00429 O00429 680 692 DNM1L Dynamin-1-like protein yes yes 2 0.0003924 142.76 By MS/MS 5 0 1 1 513200 513200 0 2784 105 2881 6536 5462 5462 1 5147.1 0 DTLVADNLDQATR VKDEKIRQAFYFALRDTLVADNLDQATRVA LRDTLVADNLDQATRVAYQKDRRWRVVTLQ R D T T R V 2 1 1 3 0 1 0 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 13 0 1430.7001 Q9NTJ3 Q9NTJ3 714 726 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 1.0659E-05 199.12 By MS/MS 2.5 1.12 1 1 1 1 4 3663900 3663900 0 2785 2575 2882 6537;6538;6539;6540 5463 5463 1 194980 0 DTLYEAVR ______________________________ MSSKVSRDTLYEAVREVLHGNQRKRRKFLE R D T V R E 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 8 0 965.48181 P62906 P62906 8 15 RPL10A 60S ribosomal protein L10a yes yes 2 0.0053896 123.69 By MS/MS 8 0 1 1 1746100 1746100 0 2786 1184 2883 6541 5464 5464 1 22044 0 DTMLQALR ELLNGIRAMEDPGVRDTMLQALRFVIQGAG MEDPGVRDTMLQALRFVIQGAGAKVDAVIR R D T L R F 1 1 0 1 0 1 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 8 0 946.4906 Q92616 Q92616 2402 2409 GCN1L1 Translational activator GCN1 yes yes 2 8.462E-05 176.66 By MS/MS 2 0 1 1 161690 161690 0 2787 2064 2884 6542 5465 5465 1 54692 0 DTNGSQFFITTVK KHYGPGWVSMANAGKDTNGSQFFITTVKTA GKDTNGSQFFITTVKTAWLDGKHVVFGKVL K D T V K T 0 0 1 1 0 1 0 1 0 1 0 1 0 2 0 1 3 0 0 1 0 0 13 0 1456.7198 P23284 P23284 146 158 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 6.8031E-08 232.17 By MS/MS 9.5 0.5 1 1 2 1658500 1658500 0 2788 702 2885 6543;6544 5466 5466 1 34227 0 DTNVMLVALAAK DYADLVKALKKVVGKDTNVMLVALAAKCLT VGKDTNVMLVALAAKCLTGLAVGLRKKFGQ K D T A K C 3 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 2 0 0 12 0 1244.6799 Q14008 Q14008 331 342 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.9532E-33 294.93 By MS/MS 2 0 1 1 462690 462690 0 2789 1417 2886 6545 5467 5467 1 156500 0 DTPDEPWAFPAR GNLARRAAATQPDAKDTPDEPWAFPAREFL DAKDTPDEPWAFPAREFLRKKLIGKEVCFT K D T A R E 2 1 0 2 0 0 1 0 0 0 0 0 0 1 3 0 1 1 0 0 0 0 12 0 1400.6361 Q7KZF4 Q7KZF4 72 83 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0062299 99.973 By MS/MS 4 0 1 1 641870 641870 0 2790 1755 2887 6546 5468 5468 1 60404 0 DTQEVPLEK IRLENNENKPVTNSRDTQEVPLEKAKQVLK PVTNSRDTQEVPLEKAKQVLKIIASYKHTT R D T E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 9 0 1057.5292 Q9Y5A9;Q7Z739 Q9Y5A9 528 536 YTHDF2;YTHDF3 YTH domain-containing family protein 2;YTH domain-containing family protein 3 no no 2 0.0014259 128.6 By MS/MS 5 0 1 1 1960400 1960400 0 2791 2908;1803 2888 6547 5469 5469 1 19662 0 DTQLQQIVDK ELFQVLKMMVGNNLKDTQLQQIVDKTIINA GNNLKDTQLQQIVDKTIINADKDGDGRISF K D T D K T 0 0 0 2 0 3 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 10 0 1186.6194 P63098 P63098 126 135 PPP3R1 Calcineurin subunit B type 1 yes yes 2 0.00074681 128.51 By MS/MS 10 0 1 1 880660 880660 0 2792 1194 2889 6548 5470 5470 1 47465 0 DTQSGSLLFIGR PKLFYADHPFIFLVRDTQSGSLLFIGRLVR LVRDTQSGSLLFIGRLVRPKGDKMRDEL__ R D T G R L 0 1 0 1 0 1 0 2 0 1 2 0 0 1 0 2 1 0 0 0 0 0 12 0 1292.6725 P50454 P50454 394 405 SERPINH1 Serpin H1 yes yes 2 5.544E-06 185.99 By MS/MS 6.5 0.5 1 1 2 6853100 6853100 0 2793 975 2890 6549;6550 5471;5472 5472 2 67565 0 DTQTSITDSCAVYR GKTLLFVRLLTGLYRDTQTSITDSCAVYRV RDTQTSITDSCAVYRVNNNRGNSLTLIDLP R D T Y R V 1 1 0 2 1 1 0 0 0 1 0 0 0 0 0 2 3 0 1 1 0 0 14 0 1615.7148 Q9Y5M8 Q9Y5M8 91 104 SRPRB Signal recognition particle receptor subunit beta yes yes 2 4.5822E-33 307.03 By MS/MS By matching 8.75 0.829 2 1 1 3 1 13881000 13828000 53324 2794 2917 2891 6551;6552;6553;6554 5473 5473 1 187300 71959 DTSASAVAVGLK KMQLLEIITTEKTSKDTSASAVAVGLKQGK TSKDTSASAVAVGLKQGKVIIVVKDGPGFY K D T L K Q 3 0 0 1 0 0 0 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 12 0 1117.5979 P40939 P40939 520 531 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 4.0374E-13 244.61 By MS/MS 5 0 1 1 11403000 11403000 0 2795 865 2892 6555 5474 5474 1 114370 0 DTSASAVAVGLKQGK KMQLLEIITTEKTSKDTSASAVAVGLKQGK DTSASAVAVGLKQGKVIIVVKDGPGFYTTR K D T G K V 3 0 0 1 0 1 0 2 0 0 1 2 0 0 0 2 1 0 0 2 0 0 15 1 1430.7729 P40939 P40939 520 534 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 7.34E-08 236.22 By MS/MS By matching 5 0 2 1 1 1993400 1962300 31166 2796 865 2893 6556;6557 5475 5475 1 19680 26172 DTSATTALELVAGER RNCVKGLVASLISVKDTSATTALELVAGER DTSATTALELVAGERLYNVVVDTEVTGKKL K D T E R L 3 1 0 1 0 0 2 1 0 0 2 0 0 0 0 1 3 0 0 1 0 0 15 0 1532.7682 O95347 O95347 534 548 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00096033 118.61 By MS/MS 3 0 1 1 748070 748070 0 2797 405 2894 6558 5476 5476 0 13688 0 DTSEDIEELVEPVAAHGPK QPFKPLSIGGIIILKDTSEDIEELVEPVAA DIEELVEPVAAHGPKIEEEEQEPEPPEPFE K D T P K I 2 0 0 2 0 0 4 1 1 1 1 1 0 0 2 1 1 0 0 2 0 0 19 0 2034.9746 Q99460 Q99460 916 934 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 4.164E-17 249.33 By MS/MS 4 0 1 1 699650 699650 0 2798 2246 2895 6559 5477 5477 1 65842 0 DTSFEQHVLWHTGGK ARFPQLDSTSFANSRDTSFEQHVLWHTGGK DTSFEQHVLWHTGGKGVDLVLNSLAEEKLQ R D T G K G 0 0 0 1 0 1 1 2 2 0 1 1 0 1 0 1 2 1 0 1 0 0 15 0 1740.822 P49327 P49327 1725 1739 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.034893 69.92 By MS/MS 3 0.816 1 1 1 3 1212600 1212600 0 2799 946 2896 6560;6561;6562 5478 5478 1 267180 0 DTSLYRPALEELRR LQDELEMLVERLGEKDTSLYRPALEELRRQ KDTSLYRPALEELRRQIRSSTTSMTSVPKP K D T R R Q 1 3 0 1 0 0 2 0 0 0 3 0 0 0 1 1 1 0 1 0 0 0 14 2 1717.9111 Q13200 Q13200 67 80 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.010255 89.44 By MS/MS 4.5 0.5 1 1 2 3096700 3096700 0 2800 1365 2897 6563;6564 5479 5479 1 196550 0 DTSVEDALER RADGIVPETWIDGPKDTSVEDALERTYVPC IDGPKDTSVEDALERTYVPCLKTLQEEVME K D T E R T 1 1 0 2 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1133.52 Q96A35 Q96A35 176 185 MRPL24 39S ribosomal protein L24, mitochondrial yes yes 2 0.015788 106.88 By matching By MS/MS 8.33 0.471 2 1 2 1 1928900 1890200 38668 2801 2102 2898 6565;6566;6567 5480 5480 1 27401 52180 DTTINEIEDTFR ELNKNRHPNFLVVEKDTTINEIEDTFRQFL VEKDTTINEIEDTFRQFLNRDDIGIILINQ K D T F R Q 0 1 1 2 0 0 2 0 0 2 0 0 0 1 0 0 3 0 0 0 0 0 12 0 1452.6733 Q16864 Q16864 42 53 ATP6V1F V-type proton ATPase subunit F yes yes 2 0.0002338 148.28 By MS/MS 10 0 1 1 87601 87601 0 2802 1562 2899 6568 5481 5481 1 4721.4 0 DTTVGTLSQR EAEEVGVEHLLRDIKDTTVGTLSQRITNQV LRDIKDTTVGTLSQRITNQVHGLKGLNSKL K D T Q R I 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 3 0 0 1 0 0 10 0 1076.5462 P51665 P51665 181 190 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 2.2827E-05 166.07 By MS/MS 7 0 1 1 720590 720590 0 2803 1005 2900 6569 5482 5482 1 11312 0 DTTVQTLTLQPSVK LHLLNRPREYIQLHRDTTVQTLTLQPSVKD RDTTVQTLTLQPSVKDGLIVYEDSPLVKAV R D T V K D 0 0 0 1 0 2 0 0 0 0 2 1 0 0 1 1 4 0 0 2 0 0 14 0 1529.8301 A3KMH1 A3KMH1 810 823 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 7.2606E-08 222.2 By MS/MS 3 0.816 1 1 1 3 1518000 1518000 0 2804 14 2901 6570;6571;6572 5483 5483 1 314990 0 DTVELQLLK FAVYKPPGLKWKHLRDTVELQLLKGLNARK KWKHLRDTVELQLLKGLNARKPPAPKQRVR R D T L K G 0 0 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1057.6019 O95900 O95900 28 36 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 6.1601E-05 176.6 By MS/MS 7 0 1 1 607720 607720 0 2805 432 2902 6573 5484 5484 1 9540.2 0 DTVKQGISR QLVRPPIRSHHSNTRDTVKQGISRTSANVT HHSNTRDTVKQGISRTSANVTIRKGPHEKE R D T S R T 0 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 9 1 1002.5458 Q8WWK9 Q8WWK9 266 274 CKAP2 Cytoskeleton-associated protein 2 yes yes 3 0.021809 80.165 By MS/MS By MS/MS 3.5 2.16 2 2 2 1 1 1 1 7 3 33751000 18936000 14815000 2806 2035 2903 6574;6575;6576;6577;6578;6579;6580;6581;6582;6583 5485;5486;5487;5488;5489 5487 5 1445400 4242500 DTVVVQDLGNIFTR APCAGGVPSHFRYEKDTVVVQDLGNIFTRL KDTVVVQDLGNIFTRLPLKRMWHQALLRSG K D T T R L 0 1 1 2 0 1 0 1 0 1 1 0 0 1 0 0 2 0 0 3 0 0 14 0 1575.8257 P10619 P10619 294 307 CTSA Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes yes 2 1.7682E-16 251.75 By MS/MS 6 0 1 1 144150 144150 0 2807 565 2904 6584 5490 5490 1 990.89 0 DTYGVRPLFK FVLLDTANKKVFLGRDTYGVRPLFKAMTED VFLGRDTYGVRPLFKAMTEDGFLAVCSEAK R D T F K A 0 1 0 1 0 0 0 1 0 0 1 1 0 1 1 0 1 0 1 1 0 0 10 1 1194.6397 P08243 P08243 138 147 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 9.4262E-07 156.75 By MS/MS 6 0 1 1 7200900 7200900 0 2808 523 2905 6585 5491 5491 1 49501 0 DTYIENEKLISGK SAVEAERLVAGKLKKDTYIENEKLISGKRQ KKDTYIENEKLISGKRQELVTKIDHILDAL K D T G K R 0 0 1 1 0 0 2 1 0 2 1 2 0 0 0 1 1 0 1 0 0 0 13 1 1508.7722 P04843 P04843 580 592 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 9.6569E-11 214.04 By MS/MS 5 0 2 2 10065000 10065000 0 2809 478 2906 6586;6587 5492;5493 5493 2 100950 0 DTYIENEKLISGKR SAVEAERLVAGKLKKDTYIENEKLISGKRQ KDTYIENEKLISGKRQELVTKIDHILDAL_ K D T K R Q 0 1 1 1 0 0 2 1 0 2 1 2 0 0 0 1 1 0 1 0 0 0 14 2 1664.8733 P04843 P04843 580 593 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.0058042 98.902 By MS/MS 5 0 1 1 1406600 1406600 0 2810 478 2907 6588 5494 5494 1 14107 0 DVAAYSASLEDVK VMARSLSPPPELEERDVAAYSASLEDVKTA ERDVAAYSASLEDVKTAVLGLLVILQTKLY R D V V K T 3 0 0 2 0 0 1 0 0 0 1 1 0 0 0 2 0 0 1 2 0 0 13 0 1366.6616 P49815 P49815 549 561 TSC2 Tuberin yes yes 2 0.051902 67.214 By MS/MS 2 0 1 1 119810 119810 0 2811 965 2908 6589 5495 5495 0 40525 0 DVAEQLEK YEIIIIDDGSPDGTRDVAEQLEKIYGSDRI GSPDGTRDVAEQLEKIYGSDRILLRPREKK R D V E K I 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 930.46583 O60762 O60762 73 80 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0034326 132.76 By MS/MS By matching 8.33 0.471 2 1 2 1 5635900 5476500 159320 2812 275 2909 6590;6591;6592 5496 5496 1 71852 214990 DVAEQLEKIYGSDR YEIIIIDDGSPDGTRDVAEQLEKIYGSDRI RDVAEQLEKIYGSDRILLRPREKKLGLGTA R D V D R I 1 1 0 2 0 1 2 1 0 1 1 1 0 0 0 1 0 0 1 1 0 0 14 1 1621.7948 O60762 O60762 73 86 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0024138 144.51 By MS/MS 8 0 1 1 396800 396800 0 2813 275 2910 6593 5497 5497 1 5009.5 0 DVAIKEPLVDVVDPK HWWENVYGFDMSCIKDVAIKEPLVDVVDPK DVAIKEPLVDVVDPKQLVTNACLIKEVDIY K D V P K Q 1 0 0 3 0 0 1 0 0 1 1 2 0 0 2 0 0 0 0 4 0 0 15 1 1635.9083 Q99873 Q99873 229 243 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.0023465 146.67 By MS/MS 7 0 1 1 1003000 1003000 0 2814 2271 2911 6594 5498 5498 1 15745 0 DVALLQER PNSRASQNPGAAQPRDVALLQERANKLVKY PGAAQPRDVALLQERANKLVKYLMLKDYTK R D V E R A 1 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 942.51345 Q9Y5V3 Q9Y5V3 467 474 MAGED1 Melanoma-associated antigen D1 yes yes 2 0.022428 96.948 By MS/MS 4.5 0.5 1 1 2 2323700 2323700 0 2815 2924 2912 6595;6596 5499 5499 1 201320 0 DVALSVLSK EGMEIYSTTLWHLQKDVALSVLSKDLTDMD LWHLQKDVALSVLSKDLTDMDKNSPEAWCA K D V S K D 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 9 0 930.5386 P30260 P30260 549 557 CDC27 Cell division cycle protein 27 homolog yes yes 2 0.013494 94.309 By MS/MS 4.5 0.5 1 1 2 1278000 1278000 0 2816 771 2913 6597;6598 5500 5500 1 103850 0 DVAYQYVK KTTWHRISVFRPGLRDVAYQYVKKGSRIYL VFRPGLRDVAYQYVKKGSRIYLEGKIDYGE R D V V K K 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 8 0 984.49165 Q04837 Q04837 96 103 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.0040034 135.77 By MS/MS By MS/MS 10 0 2 1 1 9278800 8343500 935380 2817 1293 2914 6599;6600 5501;5502 5501 2 449680 1197500 DVCTFLR EFDDGTPATMSQIAKDVCTFLRWASEPEHD ATMSQIAKDVCTFLRWASEPEHDHRKRMGL K D V L R W 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 909.43784 P08574 P08574 269 275 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 0.039458 97.602 By MS/MS 8.5 0.5 1 1 2 4200200 4200200 0 2818 525 2915 6601;6602 5503 5503 1 55451 0 DVDAYLLQLH NHLTLVPGYTGNIAKDVDAYLLQLH_____ GNIAKDVDAYLLQLH_______________ K D V L H - 1 0 0 2 0 1 0 0 1 0 3 0 0 0 0 0 0 0 1 1 0 0 10 0 1185.603 Q9H079 Q9H079 295 304 KATNBL1 KATNB1-like protein 1 yes yes 2 0.0008733 126.07 By MS/MS 9 0 1 1 54826 54826 0 2819 2403 2916 6603 5504 5504 1 1079 0 DVDETGITVASLER SVSVNDIDLSLYIPRDVDETGITVASLERF RDVDETGITVASLERFSTYTSDKDENKLSE R D V E R F 1 1 0 2 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 14 0 1503.7417 Q8WU90 Q8WU90 341 354 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 2 3.4443E-05 228.12 By MS/MS 6 0 1 1 2451800 2451800 0 2820 2012 2917 6604 5505 5505 1 16854 0 DVDFEGTDEPIFGK GKLQSESTNNGKNKRDVDFEGTDEPIFGKK RDVDFEGTDEPIFGKKPRIEESITEDLSLA R D V G K K 0 0 0 3 0 0 2 2 0 1 0 1 0 2 1 0 1 0 0 1 0 0 14 0 1567.7042 P42285 P42285 65 78 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 6.1581E-05 205.52 By MS/MS 4 0 1 1 647800 647800 0 2821 878 2918 6605 5506 5506 1 60962 0 DVDFELIK IAVNAVLTVADMERRDVDFELIKVEGKVGG VADMERRDVDFELIKVEGKVGGRLEDTKLI R D V I K V 0 0 0 2 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 977.50696 P48643 P48643 203 210 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0063562 132.08 By MS/MS 6.5 1.12 1 1 1 1 4 10172000 10172000 0 2822 940 2919 6606;6607;6608;6609 5507 5507 1 75571 0 DVDFELIKVEGK IAVNAVLTVADMERRDVDFELIKVEGKVGG ERRDVDFELIKVEGKVGGRLEDTKLIKGVI R D V G K V 0 0 0 2 0 0 2 1 0 1 1 2 0 1 0 0 0 0 0 2 0 0 12 1 1390.7344 P48643 P48643 203 214 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00017189 172.21 By MS/MS 4.82 2.04 1 1 1 1 2 3 1 1 11 278400000 278400000 0 2823 940 2920 6610;6611;6612;6613;6614;6615;6616;6617;6618;6619;6620 5508;5509;5510;5511;5512 5509 5 2110300 0 DVDFMYVELIQR GYGLFAGPCKVINAKDVDFMYVELIQRCKQ NAKDVDFMYVELIQRCKQMFLTQTDTGDDR K D V Q R C 0 1 0 2 0 1 1 0 0 1 1 0 1 1 0 0 0 0 1 2 0 0 12 0 1526.7439 P78527 P78527 380 391 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.9855E-05 166.97 By MS/MS 1.5 0.5 1 1 2 362160 362160 0 2824 1225 2921 6621;6622 5513;5514;5515 5515 720 3 100910 0 DVDGAYMTK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K D V T K V 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 9 0 998.4379 CON__P04264;P04264 P04264 290 298 KRT1 Keratin, type II cytoskeletal 1 no no 2 5.4257E-05 176.6 By MS/MS By MS/MS 5.36 2.89 3 3 2 4 4 2 2 2 3 3 12 16 79693000 58038000 21655000 + 2825 471;45 2922;2923 6623;6624;6625;6626;6627;6628;6629;6630;6631;6632;6633;6634;6635;6636;6637;6638;6639;6640;6641;6642;6643;6644;6645;6646;6647;6648;6649;6650 5516;5517;5518;5519;5520;5521;5522;5523;5524;5525;5526;5527;5528;5529;5530;5531;5532;5533;5534;5535;5536;5537;5538;5539;5540 5525 26 25 4923300 16044000 DVDGAYMTKVDLQAK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK DVDGAYMTKVDLQAKLDNLQQEIDFLTALY K D V A K L 2 0 0 3 0 1 0 1 0 0 1 2 1 0 0 0 1 0 1 2 0 0 15 1 1652.808 CON__P04264;P04264 P04264 290 304 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 5.9966E-30 241.35 By MS/MS By MS/MS 3.06 1.3 3 2 4 5 2 8 8 25458000 18762000 6695900 + 2826 471;45 2924;2925 6651;6652;6653;6654;6655;6656;6657;6658;6659;6660;6661;6662;6663;6664;6665;6666 5541;5542;5543;5544;5545;5546;5547 5546 26 7 1729400 1648400 DVDGLTSINAGR SINTEEVINAIAPEKDVDGLTSINAGRLAR PEKDVDGLTSINAGRLARGDLNDCFIPCTP K D V G R L 1 1 1 2 0 0 0 2 0 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1216.6048 P11586 P11586 123 134 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.000344 141.1 By MS/MS 4 0 1 1 670870 670870 0 2827 582 2926 6667 5548 5548 1 63133 0 DVDGVFLSK HRRATLENDFVVLKKDVDGVFLSKMELEGK FVVLKKDVDGVFLSKMELEGKLEALREYLY K D V S K M 0 0 0 2 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 2 0 0 9 0 978.50221 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 221 229 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.0039984 127.68 By MS/MS 3 0 1 1 475350 0 475350 + 2828 70 2927 6668 5549 5549 1 0 60505 DVDGVTDINLGK NLFSNKVLNALKPEKDVDGVTDINLGKLVR PEKDVDGVTDINLGKLVRGDAHECFVSPVA K D V G K L 0 0 1 3 0 0 0 2 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1244.6248 Q6UB35 Q6UB35 178 189 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.014976 93.096 By MS/MS By matching 4 0 2 1 1 2902500 2766700 135770 2829 1728 2928 6669;6670 5550 5550 0 260370 289290 DVDIIDHHDNTYTVK LDVQFSGLTKGDAVRDVDIIDHHDNTYTVK DVDIIDHHDNTYTVKYTPVQQGPVGVNVTY R D V V K Y 0 0 1 4 0 0 0 0 2 2 0 1 0 0 0 0 2 0 1 2 0 0 15 0 1783.8377 P21333 P21333 922 936 FLNA Filamin-A yes yes 3 0.0012139 115.34 By MS/MS 1.5 0.5 1 1 2 2067300 2067300 0 2830 677 2929 6671;6672 5551 5551 1 662360 0 DVDLEFLAK VAILKANLRKSPVAKDVDLEFLAKMTNGFS KSPVAKDVDLEFLAKMTNGFSGADLTEICQ K D V A K M 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1048.5441 P55072 P55072 669 677 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00037977 150.4 By MS/MS 7 2 1 1 1 1 1 1 1 7 12208000 12208000 0 2831 1054 2930 6673;6674;6675;6676;6677;6678;6679 5552;5553;5554;5555;5556;5557 5553 6 799930 0 DVDNAYMIK NKRTAAENDFVTLKKDVDNAYMIKVELQSK FVTLKKDVDNAYMIKVELQSKVDLLNQEIE K D V I K V 1 0 1 2 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 9 0 1067.4957 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 288 296 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.41E-07 204.62 By MS/MS By MS/MS 5.78 2.74 1 2 1 1 1 1 1 1 3 6 12442000 6025700 6416700 + 2832 55 2931;2932 6680;6681;6682;6683;6684;6685;6686;6687;6688 5558;5559;5560;5561 5560 45 4 542730 1836700 DVDVYSQILR SEMVPSCPFIYIIRKDVDVYSQILRKLFNE YIIRKDVDVYSQILRKLFNESHGIFLGLQR K D V L R K 0 1 0 2 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 2 0 0 10 0 1206.6245 Q9BW27 Q9BW27 60 69 NUP85 Nuclear pore complex protein Nup85 yes yes 2 3.2414E-05 159.79 By MS/MS 5 0 1 1 620670 620670 0 2833 2342 2933 6689 5562 5562 1 6225 0 DVEDFLSPLLGK TVIRKVEGDIWALQKDVEDFLSPLLGKTPV LQKDVEDFLSPLLGKTPVTQVNEVTGTLRI K D V G K T 0 0 0 2 0 0 1 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 12 0 1331.6973 Q13405 Q13405 123 134 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 0.0059199 100.88 By MS/MS 10 0 1 1 108400 108400 0 2834 1378 2934 6690 5563;5564 5564 2 5842.3 0 DVEKGELVAK KELAQRGARVYLACRDVEKGELVAKEIQTT YLACRDVEKGELVAKEIQTTTGNQQVLVRK R D V A K E 1 0 0 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 2 0 0 10 1 1086.5921 Q8TC12 Q8TC12 74 83 RDH11 Retinol dehydrogenase 11 yes yes 3 0.017985 94.409 By MS/MS 8 0 1 1 1092400 1092400 0 2835 1988 2935 6691 5565 5565 1 13792 0 DVEQQFK VSGTFLCLDCQTVIRDVEQQFKYTQPNICR LDCQTVIRDVEQQFKYTQPNICRNPVCANR R D V F K Y 0 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 892.42905 Q14566 Q14566 167 173 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.044235 94.006 By MS/MS 4 0 1 1 791480 791480 0 2836 1444 2936 6692 5566 5566 1 74484 0 DVERDVFLYR CINEAQRVKLSSPERDVERDVFLYRAYLAQ SSPERDVERDVFLYRAYLAQRKFGVVLDEI R D V Y R A 0 2 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 10 1 1310.6619 O14579 O14579 49 58 COPE Coatomer subunit epsilon yes yes 2;3 0.0011609 112.71 By MS/MS 8 0 2 2 17645000 17645000 0 2837 127 2937 6693;6694 5567;5568 5567 2 222770 0 DVEVTKEEFAQSAIR ELVRKIYSTLAGTRKDVEVTKEEFAQSAIR DVEVTKEEFAQSAIRYGQVTPLEIDILYQL K D V I R Y 2 1 0 1 0 1 3 0 0 1 0 1 0 1 0 1 1 0 0 2 0 0 15 1 1720.8632 O75746 O75746 245 259 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2;3 9.9061E-11 243.37 By MS/MS 5 0 2 2 9965300 9965300 0 2838 344 2938 6695;6696 5569;5570 5570 2 99947 0 DVEVTKEEFVLAAQK ELIRKIYSTLAGTRKDVEVTKEEFVLAAQK DVEVTKEEFVLAAQKFGQVTPMEVDILFQL K D V Q K F 2 0 0 1 0 1 3 0 0 0 1 2 0 1 0 0 1 0 0 3 0 0 15 1 1704.8934 Q9UJS0 Q9UJS0 246 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 3.5927E-16 215.02 By MS/MS 5.29 1.91 1 2 2 2 7 53465000 53465000 0 2839 2748 2939 6697;6698;6699;6700;6701;6702;6703 5571;5572;5573;5574 5573 3 564480 0 DVGGEGVQQGLLK EVDKIGSVPGIHQLRDVGGEGVQQGLLKLL LRDVGGEGVQQGLLKLLEGTIVNVPEKNSR R D V L K L 0 0 0 1 0 2 1 4 0 0 2 1 0 0 0 0 0 0 0 2 0 0 13 0 1298.683 O76031 O76031 374 386 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 4.523E-08 220.1 By MS/MS By MS/MS 5.33 0.471 2 1 1 2 7723800 7622600 101200 2840 360 2940 6704;6705;6706 5575;5576;5577 5577 3 76450 84986 DVGIEDNQLGAFLTK LDFEKDIKQMLLFLKDVGIEDNQLGAFLTK DVGIEDNQLGAFLTKNHAIFSEDLENLKTR K D V T K N 1 0 1 2 0 1 1 2 0 1 2 1 0 1 0 0 1 0 0 1 0 0 15 0 1618.8203 Q96E29 Q96E29 197 211 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 6.716E-05 211.83 By MS/MS 7 0 1 1 270540 270540 0 2841 2141 2941 6707 5578 5578 1 4247 0 DVGNLLR NTSVYHISGKKKTFKDVGNLLRSHGIDLDH SGKKKTFKDVGNLLRSHGIDLDHNRFLILQ K D V L R S 0 1 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 785.43955 Q9NTJ3 Q9NTJ3 208 214 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.022145 110.63 By MS/MS 3 0 1 1 370400 370400 0 2842 2575 2942 6708 5579 5579 1 6777.3 0 DVGRPNFEEGGPTSVGR WEERGDRRFEKPGRKDVGRPNFEEGGPTSV GRPNFEEGGPTSVGRKHEFIRSESENWRIF K D V G R K 0 2 1 1 0 0 2 4 0 0 0 0 0 1 2 1 1 0 0 2 0 0 17 1 1772.8442 Q6Y7W6 Q6Y7W6 176 192 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.00021721 132.15 By MS/MS 2.5 0.5 1 1 2 833600 833600 0 2843 1738 2943 6709;6710 5580 5580 1 118500 0 DVHMPKHPELADK IYELLFKEGVMVAKKDVHMPKHPELADKNV KKDVHMPKHPELADKNVPNLHVMKAMQSLK K D V D K N 1 0 0 2 0 0 1 0 2 0 1 2 1 0 2 0 0 0 0 1 0 0 13 1 1515.7504 P46783;Q9NQ39 P46783 26 38 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 3 0.022789 75.89 By MS/MS 9 0 1 1 218370 218370 0 2844 920 2944 6711 5581 5581 1 4297.6 0 DVIEEYFK SCVVVKDYGKESQAKDVIEEYFKCKK____ GKESQAKDVIEEYFKCKK____________ K D V F K C 0 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1041.5019 P25398 P25398 122 129 RPS12 40S ribosomal protein S12 yes yes 2 0.0063643 119.17 By MS/MS By matching 10 0 2 1 1 18746000 18642000 103500 2845 721 2945 6712;6713 5582 5582 1 1004800 132510 DVKDGKYSQVLANGLDNK PRQYKIPDWFLNRQKDVKDGKYSQVLANGL DGKYSQVLANGLDNKLREDLERLKKIRAHR K D V N K L 1 0 2 3 0 1 0 2 0 0 2 3 0 0 0 1 0 0 1 2 0 0 18 2 1963.0011 P62269 P62269 89 106 RPS18 40S ribosomal protein S18 yes yes 3 0.016452 78.917 By MS/MS 9 0 1 1 959470 959470 0 2846 1149 2946 6714 5583 5583 1 18883 0 DVLDFYNVPIQDR HVVPNSRLHQMCRVRDVLDFYNVPIQDRSK VRDVLDFYNVPIQDRSKFDELSASNLPPNL R D V D R S 0 1 1 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 13 0 1592.7835 Q8N5N7 Q8N5N7 125 137 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2 0.00041035 140.91 By MS/MS 10 0 1 1 217050 217050 0 2847 1925 2947 6715 5584 5584 1 11698 0 DVLDVYIEHR QELLPQYKEREVVNKDVLDVYIEHRLMMEQ EVVNKDVLDVYIEHRLMMEQRSRDPGMVRS K D V H R L 0 1 0 2 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 2 0 0 10 0 1257.6354 P33993 P33993 97 106 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.0047276 106.2 By MS/MS 5 0 1 1 422830 422830 0 2848 808 2948 6716 5585 5585 1 4240.8 0 DVLENKLLPLR VITKLDLMDEGTDARDVLENKLLPLRRGYI TDARDVLENKLLPLRRGYIGVVNRSQKDIE R D V L R R 0 1 1 1 0 0 1 0 0 0 4 1 0 0 1 0 0 0 0 1 0 0 11 1 1308.7765 P50570;Q05193;Q9UQ16 P50570 218 228 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 yes no 2 0.019532 106.68 By MS/MS 4.5 0.5 1 1 2 297460 297460 0 2849 977 2949 6717;6718 5586 5586 1 23443 0 DVLEYVVFEK DRFGRLMYGQEDVPKDVLEYVVFEKQLTNP EDVPKDVLEYVVFEKQLTNPYGSWRMHTKI K D V E K Q 0 0 0 1 0 0 2 0 0 0 1 1 0 1 0 0 0 0 1 3 0 0 10 0 1239.6387 Q9BRJ2 Q9BRJ2 241 250 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 2.45E-05 175.51 By MS/MS 8 0 1 1 346930 346930 0 2850 2295 2950 6719 5587;5588 5587 2 4379.9 0 DVLLFEHDR PLLTCRPLQGTTLQRDVLLFEHDRGRFFTI GTTLQRDVLLFEHDRGRFFTILGLFCAGQG R D V D R G 0 1 0 2 0 0 1 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1142.572 A0PJW6 A0PJW6 33 41 TMEM223 Transmembrane protein 223 yes yes 2 0.0022754 117.81 By MS/MS 9.5 0.5 1 1 2 925010 925010 0 2851 7 2951 6720;6721 5589;5590 5589 2 25431 0 DVLNDTAPR AQTTMEPHLLEACVRDVLNDTAPRAMAVLE LEACVRDVLNDTAPRAMAVLESLRVIITNF R D V P R A 1 1 1 2 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 9 0 999.49852 P47897 P47897 559 567 QARS Glutamine--tRNA ligase yes yes 2 0.00071905 139.98 By MS/MS 4.5 0.5 1 1 2 2396200 2396200 0 2852 928 2952 6722;6723 5591 5591 1 170470 0 DVLNPVYVER QVLVEEAFGCQLQNRDVLNPVYVERILLLR QLQNRDVLNPVYVERILLLRQGHICRLQDL R D V E R I 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 10 0 1202.6295 Q5JPH6 Q5JPH6 392 401 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.0055117 104.43 By MS/MS 7 0.816 1 1 1 3 7398700 7398700 0 2853 1605 2953 6724;6725;6726 5592 5592 1 58105 0 DVLSVAFSSDNR LTTGTTTRRFVGHTKDVLSVAFSSDNRQIV HTKDVLSVAFSSDNRQIVSGSRDKTIKLWN K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 P63244 P63244 107 118 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 1.3345E-37 315.8 By MS/MS By MS/MS 8.33 0.943 1 3 1 1 5 1 33631000 33563000 67911 2854 1202 2954 6727;6728;6729;6730;6731;6732 5593;5594;5595;5596;5597;5598;5599 5598 7 447150 91643 DVLVGADSVR GFCFLTNQWAVTNPKDVLVGADSVRAAITF VTNPKDVLVGADSVRAAITFSFFSIFSWGV K D V V R A 1 1 0 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 3 0 0 10 0 1029.5455 O43760 O43760 137 146 SYNGR2 Synaptogyrin-2 yes yes 2 0.024469 84.213 By MS/MS 8.5 0.5 1 1 2 1897700 1897700 0 2855 233 2955 6733;6734 5600 5600 1 27636 0 DVMDSTTTQK YKWNVSRPSLLADSKDVMDSTTTQKYWIDI LADSKDVMDSTTTQKYWIDIQLRWGDYDSH K D V Q K Y 0 0 0 2 0 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 0 0 10 0 1124.502 Q6P2Q9 Q6P2Q9 1650 1659 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00059151 131.52 By MS/MS 2 0 2 2 606100 606100 0 2856 1708 2956;2957 6735;6736 5601;5602 5602 912 2 205010 0 DVNAAIATIK YMACCLLYRGDVVPKDVNAAIATIKTKRTI DVVPKDVNAAIATIKTKRTIQFVDWCPTGF K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 327 336 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2 5.0789E-08 197.79 By MS/MS By MS/MS 6.07 2.57 1 1 1 1 1 3 2 2 2 1 10 5 597500000 592950000 4543200 2857 1210;1751;2290 2958 6737;6738;6739;6740;6741;6742;6743;6744;6745;6746;6747;6748;6749;6750;6751 5603;5604;5605;5606;5607;5608;5609;5610;5611;5612;5613;5614 5605 12 5738900 4962300 DVNAAIATIKTK YMACCLLYRGDVVPKDVNAAIATIKTKRTI VPKDVNAAIATIKTKRTIQFVDWCPTGFKV K D V T K R 3 0 1 1 0 0 0 0 0 2 0 2 0 0 0 0 2 0 0 1 0 0 12 1 1243.7136 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 327 338 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2 0.0077164 114.71 By MS/MS By matching 6 0 2 1 1 1894400 1792300 102120 2858 1210;1751;2290 2959 6752;6753 5615 5615 1 12321 104640 DVNGELIAVQR AQETDVRAQIRLQFRDVNGELIAVQRSMVC LQFRDVNGELIAVQRSMVCTQKSKKTEFKT R D V Q R S 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1212.6463 Q92878 Q92878 88 98 RAD50 DNA repair protein RAD50 yes yes 2 1.3881E-05 169.58 By MS/MS 3 0 1 1 521430 521430 0 2859 2074 2960 6754 5616 5616 1 9540.7 0 DVNQQEFVR ______________________________ PGVTVKDVNQQEFVRALAAFLKKSGKLKVP K D V V R A 0 1 1 1 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 9 0 1133.5465 P39019 P39019 8 16 RPS19 40S ribosomal protein S19 yes yes 2 2.7157E-05 175.91 By MS/MS By matching 9.67 0.471 1 2 2 1 54332000 53798000 534170 2860 853 2961 6755;6756;6757 5617;5618 5618 2 2859400 683890 DVNVVVVEGGPK NAGQLYLTGVVVLHKDVNVVVVEGGPKAQK LHKDVNVVVVEGGPKAQKKFKRLMLHRIKW K D V P K A 0 0 1 1 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 5 0 0 12 0 1210.6558 O43395 O43395 578 589 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.0021332 111.94 By MS/MS 4 0 1 1 590190 590190 0 2861 206 2962 6758 5619 5619 1 55541 0 DVPAYSQDTFK NPTRSEDLLDYGPFRDVPAYSQDTFKVHYE GPFRDVPAYSQDTFKVHYENNSPFLTITSM R D V F K V 1 0 0 2 0 1 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 0 11 0 1269.5877 P04843 P04843 205 215 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0046675 104.79 By MS/MS By matching 5.33 0.471 2 1 2 1 6255100 6210000 45147 2862 478 2963 6759;6760;6761 5620 5620 1 61218 37914 DVPLGTPLCIIVEK EEGYLAKILVPEGTRDVPLGTPLCIIVEKE RDVPLGTPLCIIVEKEADISAFADYRPTEV R D V E K E 0 0 0 1 1 0 1 1 0 2 2 1 0 0 2 0 1 0 0 2 0 0 14 0 1552.8535 P10515 P10515 283 296 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0031282 118.9 By MS/MS 5 0 1 1 225720 0 225720 2863 561 2964 6762 5621 5621 1 0 189560 DVPLTAEEVEFVVEK RWDQQYVIQLTSMFKDVPLTAEEVEFVVEK DVPLTAEEVEFVVEKALSMFSKMNLQEIPP K D V E K A 1 0 0 1 0 0 4 0 0 0 1 1 0 1 1 0 1 0 0 4 0 0 15 0 1702.8665 Q9NVI1 Q9NVI1 183 197 FANCI Fanconi anemia group I protein yes yes 2 0.0025912 128.68 By MS/MS 3 0 1 1 61115 61115 0 2864 2597 2965 6763 5622;5623 5622 2 1118.2 0 DVPVVAILGSGGGFR KLLGPKNSEGLHSARDVPVVAILGSGGGFR DVPVVAILGSGGGFRAMVGFSGVMKALYES R D V F R A 1 1 0 1 0 0 0 4 0 1 1 0 0 1 1 1 0 0 0 3 0 0 15 0 1442.7882 P47712 P47712 186 200 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.0039626 136.53 By MS/MS 4 0 1 1 0 0 0 2865 924 2966 6764 5624 5624 1 0 0 DVQELLTQYTK GRIQRVARGSGVSTRDVQELLTQYTKFAQM VSTRDVQELLTQYTKFAQMVKKMGGIKGLF R D V T K F 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 2 0 1 1 0 0 11 0 1336.6874 P61011 P61011 416 426 SRP54 Signal recognition particle 54 kDa protein yes yes 2 2.5679E-05 158.56 By MS/MS 7.25 0.829 1 1 2 4 3737300 3737300 0 2866 1104 2967 6765;6766;6767;6768 5625;5626 5625 2 28290 0 DVQGTDASLDEELDR PVPGTPDSLSSGSSRDVQGTDASLDEELDR DVQGTDASLDEELDRVKMS___________ R D V D R V 1 1 0 4 0 1 2 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 15 0 1661.738 Q9UJZ1 Q9UJZ1 338 352 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 8.6597E-25 291.75 By MS/MS By matching 7 0 2 1 1 2011500 1967000 44531 2867 2755 2968 6769;6770 5627;5628 5627 2 30878 80200 DVQGTDASLDEELDRVK PVPGTPDSLSSGSSRDVQGTDASLDEELDR QGTDASLDEELDRVKMS_____________ R D V V K M 1 1 0 4 0 1 2 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 17 1 1888.9014 Q9UJZ1 Q9UJZ1 338 354 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2;3 1.3609E-32 298.78 By MS/MS By matching 7.6 0.8 3 1 1 4 1 16861000 16784000 76756 2868 2755 2969 6771;6772;6773;6774;6775 5629;5630 5630 2 262570 138240 DVQIGDIVTVGECR KRHKNMSVHLSPCFRDVQIGDIVTVGECRP RDVQIGDIVTVGECRPLSKTVRFNVLKVTK R D V C R P 0 1 0 2 1 1 1 2 0 2 0 0 0 0 0 0 1 0 0 3 0 0 14 0 1559.7614 P62280 P62280 119 132 RPS11 40S ribosomal protein S11 yes yes 2 0.00020826 173.59 By MS/MS 9 0 1 1 530980 530980 0 2869 1152 2970 6776 5631 5631 1 10450 0 DVQIGDIVTVGECRPLSK KRHKNMSVHLSPCFRDVQIGDIVTVGECRP IGDIVTVGECRPLSKTVRFNVLKVTKAAGT R D V S K T 0 1 0 2 1 1 1 2 0 2 1 1 0 0 1 1 1 0 0 3 0 0 18 1 1985.0252 P62280 P62280 119 136 RPS11 40S ribosomal protein S11 yes yes 2 0.00013931 196.97 By MS/MS 9 0 1 1 993810 993810 0 2870 1152 2971 6777 5632 5632 1 19558 0 DVRPYIVGAVVR ENPVPLTVRVSPEVRDVRPYIVGAVVRGMD EVRDVRPYIVGAVVRGMDLQPGNALKRFLT R D V V R G 1 2 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 4 0 0 12 1 1342.7721 Q8N1G4 Q8N1G4 331 342 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 3 0.025508 74.46 By MS/MS 5 0 1 1 579710 579710 0 2871 1906 2972 6778 5633 5633 1 5814.2 0 DVSHPEAELQK TLEDVAHSDLILHVRDVSHPEAELQKCSVL LHVRDVSHPEAELQKCSVLSTLRGLQLPAP R D V Q K C 1 0 0 1 0 1 2 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1251.6095 O43824 O43824 383 393 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.00043379 132.88 By MS/MS 6 0 1 1 2222600 2222600 0 2872 240 2973 6779 5634 5634 1 15279 0 DVSLGTYGSR SSQDADEQDWEFQKRDVSLGTYGSRAAEPQ EFQKRDVSLGTYGSRAAEPQEQEFGKSAWI R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.011362 91.265 By MS/MS 2 0 1 1 364580 364580 0 2873 2390 2974 6780 5635 5635 1 123320 0 DVSPFDHSR RVAKLPKNKNRNRYRDVSPFDHSRIKLHQE NRNRYRDVSPFDHSRIKLHQEDNDYINASL R D V S R I 0 1 0 2 0 0 0 0 1 0 0 0 0 1 1 2 0 0 0 1 0 0 9 0 1058.4781 P18031 P18031 48 56 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.036129 81.95 By MS/MS 6.5 0.5 1 1 2 3672000 3672000 0 2874 649 2975 6781;6782 5636 5636 1 29485 0 DVSVEEEKVR RAGHDQVVVLLHDVRDVSVEEEKVRYFGKG LHDVRDVSVEEEKVRYFGKGYMVVLRLATG R D V V R Y 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 0 3 0 0 10 1 1188.5986 Q9BQA9 Q9BQA9 109 118 C17orf62 Uncharacterized protein C17orf62 yes yes 2 0.00054398 153.24 By MS/MS 9 0 1 1 561830 561830 0 2875 2287 2976 6783 5637 5637 1 11057 0 DVVGNDVATILSR FQLRRVEEQREQEKRDVVGNDVATILSRRI KRDVVGNDVATILSRRIAVEYSDSEDDSSE R D V S R R 1 1 1 2 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 3 0 0 13 0 1357.7201 Q9Y6W5 Q9Y6W5 463 475 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 2 5.7161E-06 199.4 By MS/MS 4.5 0.5 1 1 2 1198300 1198300 0 2876 2952 2977 6784;6785 5638 5638 1 21140 0 DVVQAYPEVR HERDINTDFLLVVLRDVVQAYPEVRIVLMS LVVLRDVVQAYPEVRIVLMSATIDTSMFCE R D V V R I 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 3 0 0 10 0 1174.5982 Q08211 Q08211 529 538 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0098736 94.616 By MS/MS 3.5 0.5 1 1 2 1725200 1725200 0 2877 1307 2978 6786;6787 5639 5639 1 68884 0 DVVVDLVCYR YVCKVAAEWRSTFHKDVVVDLVCYRRNGHN STFHKDVVVDLVCYRRNGHNEMDEPMFTQP K D V Y R R 0 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 4 0 0 10 0 1236.6173 Q02218;Q9ULD0 Q02218 500 509 OGDH;OGDHL 2-oxoglutarate dehydrogenase, mitochondrial;2-oxoglutarate dehydrogenase-like, mitochondrial yes no 2 0.046186 74.173 By MS/MS 4 0 1 1 317500 317500 0 2878 1275 2979 6788 5640 5640 1 29878 0 DVYVDSKDPVSSLQVK GEIARKDEKLLSFLKDVYVDSKDPVSSLQV VYVDSKDPVSSLQVKAAETCQEPKEFRLPK K D V V K A 0 0 0 3 0 1 0 0 0 0 1 2 0 0 1 3 0 0 1 4 0 0 16 1 1777.9098 Q9P032 Q9P032 67 82 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.0023696 164.22 By MS/MS 9 0 1 1 243420 243420 0 2879 2660 2980 6789 5641 5641 1 4790.5 0 DVYVPNTTYR SRVRPTREILEFPARDVYVPNTTYRNLLYI EFPARDVYVPNTTYRNLLYIYPQSLNFANR R D V Y R N 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 2 0 2 2 0 0 10 0 1226.5932 Q96N67 Q96N67 552 561 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.043121 75.652 By MS/MS 2.5 0.5 1 1 2 2786700 2786700 0 2880 2201 2981 6790;6791 5642 5642 1 757230 0 DWNTLIVGK RPGPQTRSDLLLSGRDWNTLIVGKLSPWIR LLLSGRDWNTLIVGKLSPWIRPDSKVEKIR R D W G K L 0 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 9 0 1044.5604 O14744 O14744 77 85 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0016451 125.82 By MS/MS 5.5 0.5 1 1 2 1033100 1033100 0 2881 137 2982 6792;6793 5643 5643 1 9836.2 0 DWVLNEFK WPAMGIHGDKSQQERDWVLNEFKHGKAPIL DKSQQERDWVLNEFKHGKAPILIATDVASR R D W F K H 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 8 0 1049.5182 P17844 P17844 381 388 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.0065454 118.33 By MS/MS 5 0 1 1 510640 510640 0 2882 646 2983 6794 5644 5644 1 5121.4 0 DWVLNEFR WPAMCIHGDKSQPERDWVLNEFRSGKAPIL DKSQPERDWVLNEFRSGKAPILIATDVASR R D W F R S 0 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 8 0 1077.5243 Q92841 Q92841 458 465 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.0027952 147.29 By MS/MS 5 0 1 1 225880 225880 0 2883 2073 2984 6795 5645 5645 1 2265.5 0 DYAAYNVLDDPELR FSNAVVQILRLHGVRDYAAYNVLDDPELRQ RDYAAYNVLDDPELRQGIKDYSNWPTIPQV R D Y L R Q 2 1 1 3 0 0 1 0 0 0 2 0 0 0 1 0 0 0 2 1 0 0 14 0 1652.7682 Q86SX6 Q86SX6 84 97 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes yes 2 0.0085061 98.337 By MS/MS 10 0 1 1 84483 84483 0 2884 1811 2985 6796 5646 5646 0 4553.3 0 DYAVVLNQLGAR QELIFFLHRLTSVSRDYAVVLNQLGARDAI VSRDYAVVLNQLGARDAISKALEKHLGKLE R D Y A R D 2 1 1 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 1 2 0 0 12 0 1317.7041 Q14999 Q14999 741 752 CUL7 Cullin-7 yes yes 2 0.00031639 151.83 By MS/MS 2 0 1 1 130690 130690 0 2885 1464 2986 6797 5647 5647 1 44206 0 DYDRGYDSR DRYGGRDRYDDRGSRDYDRGYDSRIGSGRR DDRGSRDYDRGYDSRIGSGRRAFGSGYRRD R D Y S R I 0 2 0 3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 9 1 1145.4738 P23588 P23588 265 273 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.02614 85.958 By MS/MS By MS/MS 5.8 0.748 2 2 1 3 2 5513000 5110400 402640 2886 708 2987 6798;6799;6800;6801;6802 5648;5649 5648 2 51473 350240 DYEAGQLYGLEK FRLDIFKDFQEETVKDYEAGQLYGLEKFWA TVKDYEAGQLYGLEKFWAFLKYSKAKNLDI K D Y E K F 1 0 0 1 0 1 2 2 0 0 2 1 0 0 0 0 0 0 2 0 0 0 12 0 1384.6511 Q6PKG0 Q6PKG0 981 992 LARP1 La-related protein 1 yes yes 2 6.0366E-06 184.44 By MS/MS 3 0 1 1 460220 460220 0 2887 1722 2988 6803 5650 5650 1 8420.7 0 DYGKESQAK GKPRKVVGCSCVVVKDYGKESQAKDVIEEY SCVVVKDYGKESQAKDVIEEYFKCKK____ K D Y A K D 1 0 0 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 1 0 0 0 9 1 1024.4825 P25398 P25398 113 121 RPS12 40S ribosomal protein S12 yes yes 2 0.0062468 130.66 By MS/MS 10 0 1 1 793180 793180 0 2888 721 2989 6804 5651 5651 1 42749 0 DYGVLLEGSGLALR MNIALLSDLTKQISRDYGVLLEGSGLALRG RDYGVLLEGSGLALRGLFIIDPNGVIKHLS R D Y L R G 1 1 0 1 0 0 1 3 0 0 4 0 0 0 0 1 0 0 1 1 0 0 14 0 1461.7827 P30048 P30048 171 184 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 5.0706E-11 246.08 By MS/MS 9 0.816 1 1 1 3 1895000 1895000 0 2889 764 2990 6805;6806;6807 5652;5653;5654 5653 3 36750 0 DYGVYLEDSGHTLR IRIPLLSDLTHQISKDYGVYLEDSGHTLRG KDYGVYLEDSGHTLRGLFIIDDKGILRQIT K D Y L R G 0 1 0 2 0 0 1 2 1 0 2 0 0 0 0 1 1 0 2 1 0 0 14 0 1623.7529 Q13162 Q13162 187 200 PRDX4 Peroxiredoxin-4 yes yes 2 5.8913E-11 229 By MS/MS 9 0.816 1 1 1 3 3597100 3597100 0 2890 1361 2991 6808;6809;6810 5655;5656 5655 2 65909 0 DYILEGEPGK IQVVREELKPDQKQRDYILEGEPGKVSNLQ DQKQRDYILEGEPGKVSNLQYLHSYLTYIK R D Y G K V 0 0 0 1 0 0 2 2 0 1 1 1 0 0 1 0 0 0 1 0 0 0 10 0 1119.5448 Q9UHB9 Q9UHB9 363 372 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0045412 111.46 By MS/MS 5 0 1 1 2006000 2006000 0 2891 2728 2992 6811 5657 5657 1 20119 0 DYIPVDQEELR KAMSRPILYSNWLSKDYIPVDQEELRDYVK WLSKDYIPVDQEELRDYVKARLKVFYEEEL K D Y L R D 0 1 0 2 0 1 2 0 0 1 1 0 0 0 1 0 0 0 1 1 0 0 11 0 1375.662 Q14204 Q14204 2880 2890 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0079533 96.113 By MS/MS 1.5 0.5 1 1 2 1517700 1517700 0 2892 1433 2993 6812;6813 5658 5658 1 409800 0 DYIWNTLNSGR LQKEVGKDVSDEKLRDYIWNTLNSGRVVPG EKLRDYIWNTLNSGRVVPGYGHAVLRKTDP R D Y G R V 0 1 2 1 0 0 0 1 0 1 1 0 0 0 0 1 1 1 1 0 0 0 11 0 1337.6364 O75390 O75390 330 340 CS Citrate synthase, mitochondrial yes yes 2 0.017821 89.827 By MS/MS 7 0 1 1 140270 140270 0 2893 321 2994 6814 5659 5659 0 2202 0 DYKVDQEIINIMQDR EDIMCMYEAEMQWKRDYKVDQEIINIMQDR DYKVDQEIINIMQDRLKACQQREGQNYQQN R D Y D R L 0 1 1 3 0 2 1 0 0 3 0 1 1 0 0 0 0 0 1 1 0 0 15 1 1878.9146 O96000 O96000 89 103 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.0082239 88.507 By MS/MS 9 0 1 1 85808 85808 0 2894 436 2995 6815 5660 5660 1 1688.7 0 DYLEDQQGGR ANSMGLFLQKTNIIRDYLEDQQGGREFWPQ TNIIRDYLEDQQGGREFWPQEVWSRYVKKL R D Y G R E 0 1 0 2 0 2 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 0 1179.5156 P37268 P37268 219 228 FDFT1 Squalene synthase yes yes 2 0.00046342 133.99 By MS/MS 7 0 1 1 797370 797370 0 2895 845 2996 6816 5661 5661 1 12517 0 DYLHLPPEIVPATLR HFYWYLTNEGIQYLRDYLHLPPEIVPATLR DYLHLPPEIVPATLRRSRPETGRPRPKGLE R D Y L R R 1 1 0 1 0 0 1 0 1 1 3 0 0 0 3 0 1 0 1 1 0 0 15 0 1732.9512 P46783 P46783 81 95 RPS10 40S ribosomal protein S10 yes yes 2;3 0.010047 84.605 By MS/MS 9.5 0.5 2 2 4 1450300 1450300 0 2896 920 2997 6817;6818;6819;6820 5662;5663;5664;5665 5662 4 34724 0 DYLHLPPEIVPATLRR HFYWYLTNEGIQYLRDYLHLPPEIVPATLR YLHLPPEIVPATLRRSRPETGRPRPKGLEG R D Y R R S 1 2 0 1 0 0 1 0 1 1 3 0 0 0 3 0 1 0 1 1 0 0 16 1 1889.0523 P46783 P46783 81 96 RPS10 40S ribosomal protein S10 yes yes 3 0.0038126 99.991 By MS/MS 9 0 1 1 139960 139960 0 2897 920 2998 6821 5666 5666 1 2754.5 0 DYLHYIRK VVTKMKMQRTIVIRRDYLHYIRKYNRFEKR RTIVIRRDYLHYIRKYNRFEKRHKNMSVHL R D Y R K Y 0 1 0 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 2 0 0 0 8 1 1106.5873 P62280 P62280 91 98 RPS11 40S ribosomal protein S11 yes yes 2 0.021774 91.626 By MS/MS 9 0 1 1 2431900 2431900 0 2898 1152 2999 6822 5667 5667 1 47859 0 DYLKEAVTTLK NDAANSRLIITQVRRDYLKEAVTTLKTVLD QVRRDYLKEAVTTLKTVLDQQQTPSRLAVT R D Y L K T 1 0 0 1 0 0 1 0 0 0 2 2 0 0 0 0 2 0 1 1 0 0 11 1 1279.7024 P42704 P42704 1118 1128 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 6.0452E-06 187.99 By MS/MS By MS/MS 3.67 0.745 3 2 1 5 1 9326600 9236800 89809 2899 886 3000 6823;6824;6825;6826;6827;6828 5668;5669;5670;5671;5672 5669 5 356030 11431 DYLSPVLADLAQR QVLEPLMNLEVTVARDYLSPVLADLAQRRG ARDYLSPVLADLAQRRGNIQEIQTRQDNKV R D Y Q R R 2 1 0 2 0 1 0 0 0 0 3 0 0 0 1 1 0 0 1 1 0 0 13 0 1459.7671 Q969S9 Q969S9 699 711 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 4.2816E-05 168.22 By MS/MS 4.5 0.5 1 1 2 245120 245120 0 2900 2095 3001 6829;6830 5673;5674 5674 2 13938 0 DYNEAYNYYTK AETFKEQGNAYYAKKDYNEAYNYYTKAIDM YAKKDYNEAYNYYTKAIDMCPKNASYYGNR K D Y T K A 1 0 2 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 4 0 0 0 11 0 1442.599 Q99615 Q99615 43 53 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 3.9434E-13 233.54 By MS/MS 6 0 1 1 2051400 2051400 0 2901 2253 3002 6831 5675;5676 5676 2 14102 0 DYQDNKADVILK KVWINTSDIILVGLRDYQDNKADVILKYNA GLRDYQDNKADVILKYNADEARSLKAYGEL R D Y L K Y 1 0 1 3 0 1 0 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1420.7198 P47813;O14602 P47813 83 94 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2;3 1.1245E-11 227.36 By MS/MS By matching 9.2 0.4 4 1 3 2 31543000 31454000 89541 2902 927 3003 6832;6833;6834;6835;6836 5677;5678;5679 5678 3 638580 204180 DYQELMNTK DALQQAKEDLARLLRDYQELMNTKLALDLE LARLLRDYQELMNTKLALDLEIATYRTLLE R D Y T K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1140.5121 CON__P04264;P04264;CON__Q3TTY5;CON__ENSEMBL:ENSBTAP00000038253 P04264 464 472 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.0223E-06 195.57 By MS/MS By MS/MS 3.32 1.69 4 3 3 3 4 2 5 14 4615800 2505800 2109900 + 2903 471;45;65;34 3004;3005 6837;6838;6839;6840;6841;6842;6843;6844;6845;6846;6847;6848;6849;6850;6851;6852;6853;6854;6855 5680;5681;5682;5683;5684;5685;5686;5687;5688;5689;5690;5691;5692;5693;5694;5695 5683 12 16 213250 1214300 DYQELMNVK EALQQAKEDLARLLRDYQELMNVKLALDVE LARLLRDYQELMNVKLALDVEIATYRKLLE R D Y V K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 9 0 1138.5329 CON__P35908v2;CON__P35908;P35908;CON__P12035;P12035;CON__Q5XKE5;Q5XKE5 CON__P35908v2 462 470 KRT2;KRT3;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79 no no 2 0.00061562 146.69 By MS/MS By MS/MS 3.78 1.47 2 3 1 1 2 2 7 2157700 245120 1912600 + 2904 55;48;68 3006;3007 6856;6857;6858;6859;6860;6861;6862;6863;6864 5696;5697;5698;5699;5700;5701;5702;5703 5701 34 7 48900 825490 DYQNVPGIEK QSRLDDDPPPSTLLKDYQNVPGIEKVDDVV STLLKDYQNVPGIEKVDDVVKRLLSLEMAN K D Y E K V 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 10 0 1161.5666 P82914 P82914 75 84 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.0099862 94.363 By MS/MS 8.5 0.5 1 1 2 2735100 2735100 0 2905 1235 3008 6865;6866 5704 5704 1 42721 0 DYRQSSGASSSSFSSSR GRSKSSRFSGGFGARDYRQSSGASSSSFSS RQSSGASSSSFSSSRASSSRSGGGGHGSSR R D Y S R A 1 2 0 1 0 1 0 1 0 0 0 0 0 1 0 9 0 0 1 0 0 0 17 1 1794.7769 O00571 O00571 601 617 DDX3X ATP-dependent RNA helicase DDX3X yes yes 3 0.00033689 127.3 By MS/MS 5 0 1 1 1172900 1172900 0 2906 116 3009 6867 5705 5705 1 11763 0 DYSAPVNFISAGLK DSDDERPSFGGKRARDYSAPVNFISAGLKK RDYSAPVNFISAGLKKGAAEEAELEDSDDE R D Y L K K 2 0 1 1 0 0 0 1 0 1 1 1 0 1 1 2 0 0 1 1 0 0 14 0 1480.7562 Q9UBB9 Q9UBB9 73 86 TFIP11 Tuftelin-interacting protein 11 yes yes 2 0.00079758 128.85 By MS/MS 4 0 1 1 121050 121050 0 2907 2695 3010 6868 5706 5706 1 11391 0 DYTGALAVFTR LQALGEAASCQLLARDYTGALAVFTRMQRL LLARDYTGALAVFTRMQRLAREHGSHPVQS R D Y T R M 2 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 1 1 0 0 11 0 1212.6139 P23610 P23610 196 206 F8A1 Factor VIII intron 22 protein yes yes 2 0.0012201 124.67 By MS/MS 7 0 1 1 368070 368070 0 2908 709 3011 6869 5707 5707 1 5778 0 DYTYEELLNR SFSNQTGPAWAGSERDYTYEELLNRVFNIM AGSERDYTYEELLNRVFNIMREKNPDMVAG R D Y N R V 0 1 1 1 0 0 2 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 10 0 1314.6092 P20042 P20042 173 182 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 3.3414E-08 199.7 By MS/MS 7.33 1.25 1 1 1 3 8372300 8372300 0 2909 668 3012 6870;6871;6872 5708;5709;5710 5708 3 64675 0 DYVAPTANLDQK AAERFAKERRLRIWRDYVAPTANLDQKDKQ IWRDYVAPTANLDQKDKQFVAKVMQVLNAD R D Y Q K D 2 0 1 2 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 12 0 1333.6514 Q7KZF4 Q7KZF4 328 339 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0011159 123.01 By MS/MS 4 0 1 1 2957200 2957200 0 2910 1755 3013 6873 5711 5711 1 278290 0 DYVDEQTGDGPVK QEYDSDSDVPEELKRDYVDEQTGDGPVKSV KRDYVDEQTGDGPVKSVSRETLKSRKKSDY R D Y V K S 0 0 0 3 0 1 1 2 0 0 0 1 0 0 1 0 1 0 1 2 0 0 13 0 1421.6311 Q96JG6 Q96JG6 570 582 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 4.6189E-08 241.39 By MS/MS 4 0 1 1 812070 812070 0 2911 2178 3014 6874 5712 5712 1 76421 0 DYVDHSETLQK IIADPPLPPASFTLRDYVDHSETLQKLVLL FTLRDYVDHSETLQKLVLLGVDLSKIEKHP R D Y Q K L 0 0 0 2 0 1 1 0 1 0 1 1 0 0 0 1 1 0 1 1 0 0 11 0 1333.615 Q96E29 Q96E29 148 158 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.00014866 126.31 By MS/MS 7 0 1 1 601900 601900 0 2912 2141 3015 6875 5713 5713 1 9448.7 0 DYVDLFR SGEVRTGKWKVPTYKDYVDLFRHLLSSDQM KWKVPTYKDYVDLFRHLLSSDQMMDSILAD K D Y F R H 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 926.44978 P78527 P78527 526 532 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.016725 117.93 By MS/MS 2.5 1.12 1 1 1 1 4 739060 739060 0 2913 1225 3016 6876;6877;6878;6879 5714;5715 5714 2 176110 0 DYVIVSHPMSSEK D Y E K 0 0 0 1 0 0 1 0 1 1 0 1 1 0 1 3 0 0 1 2 0 0 13 0 1490.7075 REV__Q7Z3Z3 yes yes 2;3 0.034276 76.221 By MS/MS 6.8 0.748 2 2 1 5 135290000 135290000 0 + 2914 2972 3017 6880;6881;6882;6883;6884 5716;5717 5716 1225 2 984970 0 DYYEILGVSR TAEQVAAVKRVKQCKDYYEILGVSRGASDE VKQCKDYYEILGVSRGASDEDLKKAYRRLA K D Y S R G 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 2 1 0 0 10 0 1213.5979 Q9NXW2 Q9NXW2 110 119 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.00052756 145.89 By MS/MS 7 0 1 1 0 0 0 2915 2630 3018 6885 5718 5718 1 0 0 EAAAALVEEETRR ALPYFDQGYEAPGVREAAAALVEEETRRYR VREAAAALVEEETRRYRPTKNYLSYLTAPD R E A R R Y 4 2 0 0 0 0 4 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 13 1 1443.7318 O75934 O75934 30 42 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 2 0.0047311 131.09 By MS/MS 8 0 1 1 4172400 4172400 0 2916 354 3019 6886 5719 5719 1 52676 0 EAAATEIRR PHTAWYSEQASLEMREAAATEIRRAITGRI ASLEMREAAATEIRRAITGRIPESLRNCVN R E A R R A 3 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 1 1015.5411 P56545 P56545 335 343 CTBP2 C-terminal-binding protein 2 yes yes 2 0.008077 116.73 By MS/MS 7 0 1 1 600080 600080 0 2917 1073 3020 6887 5720 5720 1 9420.1 0 EAACAQNFR QALQQELAWECDYRREAACAQNFRQLLAND ECDYRREAACAQNFRQLLANDPFFRVPAVV R E A F R Q 3 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 9 0 1065.4662 Q96D53 Q96D53 290 298 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.00029391 153.04 By MS/MS 6 0 1 1 1714200 1714200 0 2918 2132 3021 6888 5721 5721 1 11784 0 EAAEAEAEVPVVQYVGER GRGHWTAARRSRSRREAAEAEAEVPVVQYV EAEAEVPVVQYVGERAARADRVFVWGFSFS R E A E R A 4 1 0 0 0 1 5 1 0 0 0 0 0 0 1 0 0 0 1 4 0 0 18 0 1944.9429 Q96I51 Q96I51 37 54 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 2.8418E-11 237.21 By MS/MS 7 0 1 1 1466700 1466700 0 2919 2170 3022 6889 5722 5722 1 23025 0 EAAEAGAEAR EEARKLQQKRAQMLREAAEAGAEARLALDG AQMLREAAEAGAEARLALDGETLGEEEQED R E A A R L 5 1 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 973.44649 Q14160 Q14160 1406 1415 SCRIB Protein scribble homolog yes yes 2 0.0092438 96.034 By MS/MS 1.5 0.5 1 1 2 3530100 3530100 0 2920 1425 3023 6890;6891 5723 5723 1 1191600 0 EAAENSLVAYK YHRYLAEFATGNDRKEAAENSLVAYKAASD NDRKEAAENSLVAYKAASDIAMTELPPTHP K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258 P62258 143 153 YWHAE 14-3-3 protein epsilon yes yes 2 1.1557E-05 174.02 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 19522000 19226000 296140 2921 1146 3024 6892;6893;6894 5724;5725 5724 2 245690 399630 EAAEVLQNNR QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ DPLNKEAAEVLQNNRRLFEQNVQRSMRGGY K E A N R R 2 1 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1142.568 P61081 P61081 148 157 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 4.2832E-15 253.05 By MS/MS 9.5 0.5 1 1 2 2116900 2116900 0 2922 1108 3025 6895;6896 5726 5726 1 51280 0 EAAEVLQNNRR QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ PLNKEAAEVLQNNRRLFEQNVQRSMRGGYI K E A R R L 2 2 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 1 1298.6691 P61081 P61081 148 158 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.00088205 138.06 By MS/MS 9 0 1 1 1681500 1681500 0 2923 1108 3026 6897 5727 5727 1 33092 0 EAAEYIAQAR LGKYGQKKIREIQEREAAEYIAQARRQYHF EIQEREAAEYIAQARRQYHFESNQRTCNMT R E A A R R 4 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1120.5513 P56589 P56589 44 53 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 1.5726E-11 224.36 By MS/MS By MS/MS 4 2.71 2 1 1 2 3 3 6596000 4382400 2213600 2924 1075 3027 6898;6899;6900;6901;6902;6903 5728;5729;5730 5730 3 180510 2300100 EAAHLLNDALAIR LNILALVYRDQNKYKEAAHLLNDALAIREK YKEAAHLLNDALAIREKTLGKDHPAVAATL K E A I R E 4 1 1 1 0 0 1 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 13 0 1405.7678 Q9H0B6 Q9H0B6 258 270 KLC2 Kinesin light chain 2 yes yes 2;3 0.00015897 171.67 By MS/MS 5 0 2 2 2392700 2392700 0 2925 2405 3028 6904;6905 5731;5732 5731 2 23997 0 EAAHLLNDALSIR LNILALVYRDQNKYKEAAHLLNDALSIRES YKEAAHLLNDALSIRESTLGPDHPAVAATL K E A I R E 3 1 1 1 0 0 1 0 1 1 3 0 0 0 0 1 0 0 0 0 0 0 13 0 1421.7627 Q9NSK0 Q9NSK0 271 283 KLC4 Kinesin light chain 4 yes yes 2 0.02568 83.081 By MS/MS 5 0 1 1 515920 515920 0 2926 2572 3029 6906 5733 5733 0 5174.4 0 EAAIWELEER ERECLNNKQQLMRAREAAIWELEERHLQEK LMRAREAAIWELEERHLQEKHQLLKQQLKD R E A E R H 2 1 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 10 0 1244.6037 Q9H2G2 Q9H2G2 1005 1014 SLK STE20-like serine/threonine-protein kinase yes yes 2 7.1444E-06 176.33 By MS/MS 2 0 1 1 281840 281840 0 2927 2429 3030 6907 5734 5734 1 95329 0 EAAKALDKR LKTALIHDGLARGIREAAKALDKRQAHLCV LARGIREAAKALDKRQAHLCVLASNCDEPM R E A K R Q 3 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 2 1000.5665 P25398 P25398 37 45 RPS12 40S ribosomal protein S12 yes yes 2 0.012231 126.24 By MS/MS 10 0 1 1 358090 358090 0 2928 721 3031 6908 5735 5735 1 19300 0 EAALEAAVLNKEE NPHLNALSTDSACRREAALEAAVLNKEE__ RREAALEAAVLNKEE_______________ R E A E E - 4 0 1 0 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 13 1 1385.7038 Q9NZB2 Q9NZB2 1106 1118 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 4.5859E-07 214.04 By MS/MS 3 0 1 1 1076600 1076600 0 2929 2647 3032 6909 5736 5736 1 19699 0 EAALGAGFSDK FGTVIQEVKTSNVAREAALGAGFSDKTPAH NVAREAALGAGFSDKTPAHTVTMACISANQ R E A D K T 3 0 0 1 0 0 1 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1064.5138 P55084 P55084 118 128 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.0072241 98.04 By MS/MS 6.5 0.5 1 1 2 8762200 8762200 0 2930 1055 3033 6910;6911 5737 5737 1 90584 0 EAALILGVSPTANK GGYYRGGFEPKMTKREAALILGVSPTANKG REAALILGVSPTANKGKIRDAHRRIMLLNH R E A N K G 3 0 1 0 0 0 1 1 0 1 2 1 0 0 1 1 1 0 0 1 0 0 14 0 1382.7769 Q96DA6 Q96DA6 62 75 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 0.031288 103.21 By MS/MS 10 0 1 1 838410 838410 0 2931 2133 3034 6912 5738 5738 0 45187 0 EAALPPVSPLK SLTEDRDRGRDAVKREAALPPVSPLKAALS AVKREAALPPVSPLKAALSEEELEKKSKAI R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 Q04637 Q04637 1224 1234 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00022616 140.83 By MS/MS 3 1.41 1 1 1 1 1 5 26436000 26436000 0 2932 1291 3035 6913;6914;6915;6916;6917 5739;5740;5741;5742;5743;5744;5745;5746 5741 8 7255700 0 EAANAYQR FTMLGYLNEHLQLKKEAANAYQRAILLLQT EHLQLKKEAANAYQRAILLLQTAEDQDTYN K E A Q R A 3 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 8 0 921.43044 Q6PGP7 Q6PGP7 998 1005 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.022758 106.42 By MS/MS 3 0 1 1 0 0 0 2933 1716 3036 6918 5747 5747 1 0 0 EAAPQDYEAVAR RLAQPLHACLVQCSREAAPQDYEAVARGSF CSREAAPQDYEAVARGSFSLLWKGAEALLE R E A A R G 4 1 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 12 0 1318.6153 Q14674 Q14674 134 145 ESPL1 Separin yes yes 2 0.036784 76.332 By MS/MS 2 0 1 1 326190 326190 0 2934 1449 3037 6919 5748 5748 1 110330 0 EAAQAMYIDSYNSR DDELYQRTRISLLQREAAQAMYIDSYNSRG REAAQAMYIDSYNSRGFMINGNRVLGPCAL R E A S R G 3 1 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 2 0 0 0 14 0 1617.7093 Q9BU61 Q9BU61 53 66 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 8.8593E-24 278.27 By MS/MS 10 0 2 2 2613600 2613600 0 2935 2321 3038;3039 6920;6921 5749;5750 5749 1070 2 140860 0 EAASQRPLSSSASNR VSSPDVSSVSELTNKEAASQRPLSSSASNR EAASQRPLSSSASNRLSVSSLLAAGAPMSS K E A N R L 3 2 1 0 0 1 1 0 0 0 1 0 0 0 1 5 0 0 0 0 0 0 15 1 1559.7652 Q9ULT8 Q9ULT8 1501 1515 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0025385 162.93 By MS/MS 2 0.816 1 1 1 3 331050 331050 0 2936 2774 3040 6922;6923;6924 5751 5751 1 75782 0 EAAYHPEVAPDVR NLSRRAIADMLRACKEAAYHPEVAPDVRLR CKEAAYHPEVAPDVRLRALHYGRECANGYL K E A V R L 3 1 0 1 0 0 2 0 1 0 0 0 0 0 2 0 0 0 1 2 0 0 13 0 1452.6997 Q9Y490 Q9Y490 2221 2233 TLN1 Talin-1 yes yes 2 0.0062219 99.973 By MS/MS 2.5 0.5 1 1 2 431490 431490 0 2937 2888 3041 6925;6926 5752 5752 1 123320 0 EACGVIVELIK AKQAASGLVGQENAREACGVIVELIKSKKM ENAREACGVIVELIKSKKMAGRAVLLAGPP R E A I K S 1 0 0 0 1 0 2 1 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1229.669 Q9Y265 Q9Y265 47 57 RUVBL1 RuvB-like 1 yes yes 2 4.8901E-09 205.09 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 35037000 35037000 0 2938 2815 3042 6927;6928;6929;6930;6931;6932 5753;5754;5755;5756;5757;5758 5754 6 252020 0 EACNQDALQEAGTFR KQEESQFHPLEWLAREACNQDALQEAGTFR EACNQDALQEAGTFRHTLWKRVQGAVTPLL R E A F R H 3 1 1 1 1 2 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 15 0 1708.7475 Q63HN8 Q63HN8 3607 3621 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 1.9442E-16 253.42 By MS/MS 1.5 0.5 1 1 2 568520 568520 0 2939 1664 3043 6933;6934 5759 5759 1 166230 0 EACWTISNITAGNR SLLHLLSSPKESIKKEACWTISNITAGNRA KEACWTISNITAGNRAQIQTVIDANIFPAL K E A N R A 2 1 2 0 1 0 1 1 0 2 0 0 0 0 0 1 2 1 0 0 0 0 14 0 1591.7413 P52294;O60684 P52294 357 370 KPNA1;KPNA6 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7 yes no 2 6.0502E-05 184.44 By MS/MS 6 0 1 1 2059500 2059500 0 2940 1014 3044 6935 5760 5760 1 14157 0 EADAALFSELHR LVAEKIKKELIRQRREADAALFSELHRKLH QRREADAALFSELHRKLHSQGVLKNKWSIL R E A H R K 3 1 0 1 0 0 2 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 12 0 1357.6626 Q96CW5 Q96CW5 68 79 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 1.2E-05 159.83 By MS/MS 4 0 1 1 1135400 1135400 0 2941 2128 3045 6936 5761 5761 1 106840 0 EADASPASAGICR VLQGRLDEARQMLSKEADASPASAGICRIM SKEADASPASAGICRIMGDLMRTMPILSPG K E A C R I 4 1 0 1 1 0 1 1 0 1 0 0 0 0 1 2 0 0 0 0 0 0 13 0 1303.5827 Q9BW27 Q9BW27 219 231 NUP85 Nuclear pore complex protein Nup85 yes yes 2 0.00021918 160.77 By MS/MS 5 0 1 1 483290 483290 0 2942 2342 3046 6937 5762 5762 1 4847.1 0 EADDIVNWLK RNGDTASPKEYTAGREADDIVNWLKKRTGP YTAGREADDIVNWLKKRTGPAATTLPDGAA R E A L K K 1 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1201.5979 P07237 P07237 121 130 P4HB Protein disulfide-isomerase yes yes 2 0.0014087 115.71 By MS/MS 6 0 1 1 1651800 1651800 0 2943 507 3047 6938 5763 5763 1 11355 0 EADEDAVQFANR WAIVCSVWYLPPMTREADEDAVQFANRVKS MTREADEDAVQFANRVKSAIARQGGLVDLL R E A N R V 3 1 1 2 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 12 0 1363.6004 Q86UL3 Q86UL3 394 405 AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes yes 2 1.6538E-12 233.09 By MS/MS 2 0.816 1 1 1 3 1201600 1201600 0 2944 1822 3048 6939;6940;6941 5764;5765 5764 2 282380 0 EADESLNFEEQILEAAK AAKKLEQLKPRAKPKEADESLNFEEQILEA DESLNFEEQILEAAKSIAAATSALVKAASA K E A A K S 3 0 1 1 0 1 5 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 17 0 1934.9109 Q9Y490 Q9Y490 2334 2350 TLN1 Talin-1 yes yes 2 3.038E-33 297.03 By MS/MS 2 0 1 1 180410 180410 0 2945 2888 3049 6942 5766 5766 1 61022 0 EADGSETPEPFAAEAK VTVMLSGIKCPTFRREADGSETPEPFAAEA ADGSETPEPFAAEAKFFTESRLLQRDVQII R E A A K F 4 0 0 1 0 0 4 1 0 0 0 1 0 1 2 1 1 0 0 0 0 0 16 0 1647.7264 Q7KZF4 Q7KZF4 234 249 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 6.7893E-11 231.66 By MS/MS By MS/MS 4 0 2 1 1 5524300 5438700 85529 2946 1755 3050 6943;6944 5767;5768 5768 2 511820 182230 EADGSLQPLPQR QLVELWNLVFMQHNREADGSLQPLPQRHVD HNREADGSLQPLPQRHVDTGMGLERLVAVL R E A Q R H 1 1 0 1 0 2 1 1 0 0 2 0 0 0 2 1 0 0 0 0 0 0 12 0 1309.6626 Q5JTZ9 Q5JTZ9 251 262 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 2.3837E-05 175.65 By MS/MS By matching 4.67 0.745 3 2 1 5 1 9473700 9443700 30018 2947 1613 3051 6945;6946;6947;6948;6949;6950 5769;5770;5771 5770 3 707530 63958 EADLAAQEEAAK AAFQKERAIFLAAQKEADLAAQEEAAKK__ AQKEADLAAQEEAAKK______________ K E A A K K 5 0 0 1 0 1 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 0 1244.5885 Q9Y3B7 Q9Y3B7 180 191 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 6.3691E-18 257.09 By MS/MS 9 0 1 1 1967500 1967500 0 2948 2866 3052 6951 5772 5772 1 38720 0 EADLLAAQSLVR LSAEKDALSGAVRQREADLLAAQSLVRETE RQREADLLAAQSLVRETEAALSREQQRSSQ R E A V R E 3 1 0 1 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 12 0 1284.7038 O75146 O75146 567 578 HIP1R Huntingtin-interacting protein 1-related protein yes yes 2 3.3518E-05 172.61 By MS/MS 2.5 0.5 1 1 2 290270 290270 0 2949 296 3053 6952;6953 5773 5773 1 29955 0 EAEDGIIAYDDCGVK FSNPKTTSPNKGKEKEAEDGIIAYDDCGVK EAEDGIIAYDDCGVKLTIAFQAKDVEGSTS K E A V K L 2 0 0 3 1 0 2 2 0 2 0 1 0 0 0 0 0 0 1 1 0 0 15 0 1653.7192 O75534 O75534 453 467 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.034549 75.819 By MS/MS 4 0 1 1 2680700 2680700 0 2950 333 3054 6954 5774 5774 0 252270 0 EAEEAEREER KLRKLEEKQARKAQREAEEAEREERKRLES RKAQREAEEAEREERKRLESQREAEWKKEE R E A E R K 2 2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 1246.5426 Q96HY6 Q96HY6 136 145 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 0.0043404 101.25 By MS/MS 7 0 1 1 5179400 5179400 0 2951 2169 3055 6955 5775 5775 1 81308 0 EAEILEVLR TARWEYMHSPSENSKEAEILEVLRHPRDWV PSENSKEAEILEVLRHPRDWVR________ K E A L R H 1 1 0 0 0 0 3 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1070.5972 P36551 P36551 439 447 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 0.00034583 151.44 By MS/MS 7.5 0.5 1 1 2 1050100 1050100 0 2952 837 3056 6956;6957 5776 5776 1 15904 0 EAELLEPLMPAIR EFIRGSTLRFLCKLKEAELLEPLMPAIRAC LKEAELLEPLMPAIRACLEHRHSYVRRNAV K E A I R A 2 1 0 0 0 0 3 0 0 1 3 0 1 0 2 0 0 0 0 0 0 0 13 0 1480.796 P53618 P53618 129 141 COPB1 Coatomer subunit beta yes yes 2 0.00022442 159.4 By MS/MS 4.8 0.748 2 2 1 5 4108800 4108800 0 2953 1033 3057;3058 6958;6959;6960;6961;6962 5777;5778;5779;5780 5777 569 4 289000 0 EAEMEEHREHIK RRGDQGPKTIDQIHKEAEMEEHREHIKVQQ IHKEAEMEEHREHIKVQQLMAKGSDKRRGG K E A I K V 1 1 0 0 0 0 5 0 2 1 0 1 1 0 0 0 0 0 0 0 0 0 12 1 1536.6991 Q04637 Q04637 1008 1019 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.033737 73.499 By MS/MS 2 0 1 1 539550 539550 0 2954 1291 3059 6963 5781 5781 770 1 182500 0 EAEPDLLAVLR LLVGLLAAAETQCWKEAEPDLLAVLRGLSE QCWKEAEPDLLAVLRGLSEDFQKAEDASKF K E A L R G 2 1 0 1 0 0 2 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1224.6714 Q9UBB6 Q9UBB6 213 223 NCDN Neurochondrin yes yes 2 1.6379E-06 182.76 By MS/MS 5.5 0.5 1 1 2 2199200 2199200 0 2955 2694 3060 6964;6965 5782;5783 5782 2 20943 0 EAEPYYLLLPR IPTCFTLYQDEITEREAEPYYLLLPRVSYL ITEREAEPYYLLLPRVSYLTLVTDKVKKHF R E A P R V 1 1 0 0 0 0 2 0 0 0 3 0 0 0 2 0 0 0 2 0 0 0 11 0 1362.7184 Q9H1Y0 Q9H1Y0 31 41 ATG5 Autophagy protein 5 yes yes 2 0.0049632 104.01 By MS/MS 6.5 0.5 1 1 2 728830 728830 0 2956 2423 3061 6966;6967 5784 5784 1 5486.8 0 EAEREGATEEAVRER NMARAARDLADVAAREAEREGATEEAVRER EAEREGATEEAVRERVICCTEDMLEKDLRD R E A E R V 3 3 0 0 0 0 6 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 15 2 1730.8184 Q9BV20 Q9BV20 110 124 MRI1 Methylthioribose-1-phosphate isomerase yes yes 3 0.0060616 120.9 By MS/MS 7 0 1 1 1539700 1539700 0 2957 2328 3062 6968 5785 5785 1 24171 0 EAESLIAK DGTTSVTVLAAELLREAESLIAKKIHPQTI LAAELLREAESLIAKKIHPQTIIAGWREAT R E A A K K 2 0 0 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 859.4651 P78371 P78371 112 119 CCT2 T-complex protein 1 subunit beta yes yes 1 0.018236 111.65 By MS/MS 6 0 1 1 5783800 5783800 0 2958 1222 3063 6969 5786 5786 0 39759 0 EAESLIAKK DGTTSVTVLAAELLREAESLIAKKIHPQTI AAELLREAESLIAKKIHPQTIIAGWREATK R E A K K I 2 0 0 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 987.56006 P78371 P78371 112 120 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0041725 131.22 By MS/MS By matching 6.33 0.471 2 1 2 1 30081000 30036000 44263 2959 1222 3064 6970;6971;6972 5787 5787 1 211860 45357 EAESSPFVER EKQDKIYFMAGSSRKEAESSPFVERLLKKG GSSRKEAESSPFVERLLKKGYEVIYLTEPV K E A E R L 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 10 0 1149.5302 P14625 P14625 548 557 HSP90B1 Endoplasmin yes yes 2 0.0079202 99.013 By MS/MS By matching 4.75 0.829 2 1 1 3 1 5623300 5540600 82766 2960 615 3065 6973;6974;6975;6976 5788 5788 1 455840 176350 EAETFKEQGNAYYAK AATEPELLDDQEAKREAETFKEQGNAYYAK EAETFKEQGNAYYAKKDYNEAYNYYTKAID R E A A K K 3 0 1 0 0 1 3 1 0 0 0 2 0 1 0 0 1 0 2 0 0 0 15 1 1747.8053 Q99615 Q99615 27 41 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 8.5921E-07 205.12 By MS/MS 6 0 2 2 6052100 6052100 0 2961 2253 3066 6977;6978 5789;5790 5790 2 41603 0 EAEYFELPELVR LVLPDYFPERSRLQREAEYFELPELVRRLG LQREAEYFELPELVRRLGAPQQPGPGPPPS R E A V R R 1 1 0 0 0 0 4 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 12 0 1493.7402 Q96CX2 Q96CX2 116 127 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2 0.0014795 125.75 By MS/MS 7 0 1 1 92687 92687 0 2962 2129 3067 6979 5791 5791 1 1455 0 EAFGFIER KKKQARCQGVVCAMKEAFGFIERGDVVKEI GVVCAMKEAFGFIERGDVVKEIFFHYSEFK K E A E R G 1 1 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 8 0 967.47633 O75534 O75534 195 202 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.044696 84.498 By MS/MS 4.5 0.5 1 1 2 3853500 3853500 0 2963 333 3068 6980;6981 5792 5792 1 314520 0 EAFLEQFR LFERTCRQYDKLRKREAFLEQFRKEDMFKD YDKLRKREAFLEQFRKEDMFKDNFDEMDTS R E A F R K 1 1 0 0 0 1 2 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1038.5134 P23258 P23258 402 409 TUBG1 Tubulin gamma-1 chain yes yes 2 1.8016E-06 194.44 By MS/MS 6.5 0.5 1 1 2 1508100 1508100 0 2964 701 3069 6982;6983 5793 5793 1 18566 0 EAFNIIGR IGPKRTAVVRGIMHREAFNIIGRRIVQVAQ VRGIMHREAFNIIGRRIVQVAQAMSLTEDV R E A G R R 1 1 1 0 0 0 1 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 8 0 918.49232 Q96S52 Q96S52 177 184 PIGS GPI transamidase component PIG-S yes yes 2 0.005242 124.37 By MS/MS 5 0 1 1 2238000 2238000 0 2965 2230 3070 6984 5794 5794 1 22446 0 EAFNLLLR ILIHNAGISSCGRTREAFNLLLRVNHIGPF SSCGRTREAFNLLLRVNHIGPFLLTHLLLP R E A L R V 1 1 1 0 0 0 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 974.55492 Q6UX07 Q6UX07 133 140 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.0040193 130.04 By MS/MS 7.5 0.5 1 1 2 370710 370710 0 2966 1733 3071 6985;6986 5795 5795 1 5689.1 0 EAFQLFDR ______________________________ DQTAEFKEAFQLFDRTGDGKILYSQCGDVM K E A D R T 1 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1024.4978 P60660 P60660 14 21 MYL6 Myosin light polypeptide 6 yes yes 2 0.0013052 149.94 By MS/MS 10 0 1 1 727310 727310 0 2967 1094 3072 6987 5796 5796 1 39199 0 EAGAGGLAIAVEGPSK RAEAGVPAEFSIWTREAGAGGLAIAVEGPS AGAGGLAIAVEGPSKAEISFEDRKDGSCGV R E A S K A 4 0 0 0 0 0 2 4 0 1 1 1 0 0 1 1 0 0 0 1 0 0 16 0 1425.7464 P21333 P21333 2265 2280 FLNA Filamin-A yes yes 2 0.000272 144.51 By MS/MS 2 0.816 1 1 1 3 766060 766060 0 2968 677 3073 6988;6989;6990 5797;5798 5797 2 196160 0 EAGEDEEGFLSK GGSTMDSSAGSKARREAGEDEEGFLSKLKK ARREAGEDEEGFLSKLKKMFTS________ R E A S K L 1 0 0 1 0 0 4 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 12 0 1309.5674 Q96EY1 Q96EY1 462 473 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.00013071 155 By MS/MS 7 0 1 1 3995200 3995200 0 2969 2150 3074 6991 5799 5799 1 62718 0 EAGELKPEEEITVGPVQK RSLGEIPIVESEIKKEAGELKPEEEITVGP ELKPEEEITVGPVQKLVTEMGTYATQSALS K E A Q K L 1 0 0 0 0 1 5 2 0 1 1 2 0 0 2 0 1 0 0 2 0 0 18 1 1952.0102 P53618 P53618 496 513 COPB1 Coatomer subunit beta yes yes 2;3 2.6929E-10 222.81 By MS/MS 3.8 1.47 1 2 2 5 26254000 26254000 0 2970 1033 3075 6992;6993;6994;6995;6996 5800;5801;5802;5803;5804 5802 5 1938400 0 EAGEQGDIEPR QRINIPPQRGPRPIREAGEQGDIEPRRMVR RPIREAGEQGDIEPRRMVRHPDSHQLFIGN R E A P R R 1 1 0 1 0 1 3 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 11 0 1199.5418 Q13283 Q13283 321 331 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.0013358 114.89 By MS/MS 7 0 1 1 472980 472980 0 2971 1368 3076 6997 5805 5805 1 7424.9 0 EAGGGGVGGPGAK SDPFEVLKAAENKKKEAGGGGVGGPGAKSA KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG K E A A K S 2 0 0 0 0 0 1 7 0 0 0 1 0 0 1 0 0 0 0 1 0 0 13 0 1012.4938 Q8NC51 Q8NC51 40 52 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.0035929 107.79 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 9667400 9509700 157710 2972 1946 3077 6998;6999;7000;7001;7002;7003 5806;5807;5808 5807 3 76138 161600 EAGISDYLTIEELVK ENCMTIDKLSWGYRREAGISDYLTIEELVK EAGISDYLTIEELVKQLVETVSCGGNLLMN R E A V K Q 1 0 0 1 0 0 3 1 0 2 2 1 0 0 0 1 1 0 1 1 0 0 15 0 1678.8665 Q9BTY2 Q9BTY2 307 321 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.00034436 137.4 By MS/MS 6 0 1 1 0 0 0 2973 2320 3078 7004 5809 5809 1 0 0 EAGLQMFGQLAR RGEWDSLTPEARREKEAGLQMFGQLARFHN REKEAGLQMFGQLARFHNIMSNETIGTLAF K E A A R F 2 1 0 0 0 2 1 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 12 0 1319.6656 Q14139 Q14139 833 844 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.00017362 151.83 By MS/MS 3 0 1 1 398390 398390 0 2974 1421 3079 7005 5810 5810 811 1 7289.5 0 EAGNINQSLLTLGR SENIGRSGAVDKRAREAGNINQSLLTLGRV REAGNINQSLLTLGRVITALVERTPHVPYR R E A G R V 1 1 2 0 0 1 1 2 0 1 3 0 0 0 0 1 1 0 0 0 0 0 14 0 1484.7947 P52732 P52732 284 297 KIF11 Kinesin-like protein KIF11 yes yes 2 1.197E-09 225.79 By MS/MS 4 0.816 1 1 1 3 1052000 1052000 0 2975 1021 3080 7006;7007;7008 5811;5812 5811 2 70658 0 EAGVEMGDEDDLSTPNEK PTLRLEYCEALAMLREAGVEMGDEDDLSTP VEMGDEDDLSTPNEKLLGHLVKEKYDTDFY R E A E K L 1 0 1 3 0 0 4 2 0 0 1 1 1 0 1 1 1 0 0 1 0 0 18 0 1934.8051 P14868 P14868 357 374 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 1.1845E-33 304.08 By MS/MS 6 0 1 1 5288300 5288300 0 2976 620 3081 7009 5813 5813 1 36353 0 EAIDSYIK WSQLAKAQLQKGMVKEAIDSYIKADDPSSY LQKGMVKEAIDSYIKADDPSSYMEVVQAAN K E A I K A 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 8 0 937.47566 Q00610 Q00610 1123 1130 CLTC Clathrin heavy chain 1 yes yes 2 0.052652 91.9 By MS/MS 1 0 1 1 0 0 0 2977 1262 3082 7010 5814 5814 1 0 0 EAIEGTYIDK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL K E A D K K 1 0 0 1 0 0 2 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 10 0 1137.5554 P62280 P62280 49 58 RPS11 40S ribosomal protein S11 yes yes 2 0.0011712 120.31 By MS/MS By matching 9.33 0.471 2 1 2 1 12045000 11994000 51144 2978 1152 3083 7011;7012;7013 5815 5815 1 245980 116620 EAIEGTYIDKK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT KTPKEAIEGTYIDKKCPFTGNVSIRGRILS K E A K K C 1 0 0 1 0 0 2 1 0 2 0 2 0 0 0 0 1 0 1 0 0 0 11 1 1265.6503 P62280 P62280 49 59 RPS11 40S ribosomal protein S11 yes yes 2;3 1.1668E-08 194.94 By MS/MS By matching 9.25 0.433 3 1 3 1 39960000 39895000 64867 2979 1152 3084 7014;7015;7016;7017 5816;5817;5818 5816 3 824950 147920 EAIHSQLLEK NMYEGVGRMFILQSKEAIHSQLLEKQKIAE ILQSKEAIHSQLLEKQKIAEEKIKELEQKK K E A E K Q 1 0 0 0 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1166.6295 O60925 O60925 74 83 PFDN1 Prefoldin subunit 1 yes yes 2 1.3428E-05 179.1 By MS/MS 10 0 1 1 379660 379660 0 2980 286 3085 7018 5819 5819 1 20463 0 EAIIVGSIITK GILIPLCESGTCTLREAIIVGSIITKCSIP CTLREAIIVGSIITKCSIPVLHSSAAMLKI R E A T K C 1 0 0 0 0 0 1 1 0 4 0 1 0 0 0 1 1 0 0 1 0 0 11 0 1142.6911 Q13895 Q13895 304 314 BYSL Bystin yes yes 2 7.164E-05 138.66 By MS/MS 6 0 1 1 3119900 3119900 0 2981 1413 3086 7019 5820 5820 0 21447 0 EAINLLEPMTNDPVNYVR AAMALGICCAGTGNKEAINLLEPMTNDPVN NLLEPMTNDPVNYVRQGALIASALIMIQQT K E A V R Q 1 1 3 1 0 0 2 0 0 1 2 0 1 0 2 0 1 0 1 2 0 0 18 0 2087.0357 Q99460 Q99460 667 684 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 2.9057E-24 272.77 By MS/MS 4 0 1 1 1291100 1291100 0 2982 2246 3087 7020 5821 5821 1040 1 121500 0 EAINVEQAFQTIAR CYSKNNIPYFETSAKEAINVEQAFQTIARN KEAINVEQAFQTIARNALKQETEVELYNEF K E A A R N 3 1 1 0 0 2 2 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 14 0 1588.8209 P51149 P51149 158 171 RAB7A Ras-related protein Rab-7a yes yes 2 2.2209E-44 336.16 By MS/MS 9 0.816 1 1 1 3 1497100 1497100 0 2983 990 3088 7021;7022;7023 5822;5823 5823 2 31507 0 EALCGCTVNVPTLDGR RDGSDVIYPARISLREALCGCTVNVPTLDG ALCGCTVNVPTLDGRTIPVVFKDVIRPGMR R E A G R T 1 1 1 1 2 0 1 2 0 0 2 0 0 0 1 0 2 0 0 2 0 0 16 0 1760.8186 P25685 P25685 264 279 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 3.996E-07 214.42 By MS/MS 7 0 1 1 2065100 2065100 0 2984 722 3089 7024 5824 5824 1 32418 0 EALDVLGAVLK MEKVAASPEDIKLCREALDVLGAVLKALTS KLCREALDVLGAVLKALTSADGASEEQSQN R E A L K A 2 0 0 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1126.6598 Q92552 Q92552 278 288 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 1.1036E-05 172.23 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 12186000 12129000 56737 2985 2054 3090 7025;7026;7027 5825;5826;5827;5828 5827 4 188880 102180 EALEHLCTYEK LLYQNQVLREAGLYREALEHLCTYEKQICD GLYREALEHLCTYEKQICDKLAVEETKGEL R E A E K Q 1 0 0 0 1 0 3 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 11 0 1391.6391 Q9BXJ9 Q9BXJ9 208 218 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.0013605 114.4 By MS/MS 4 0 1 1 1138200 1138200 0 2986 2357 3091 7028 5829 5829 1 107110 0 EALELTDTGLLSGSEER FGRLKDDREKCAKAKEALELTDTGLLSGSE LELTDTGLLSGSEERVQVALEELQDLKGVW K E A E R V 1 1 0 1 0 0 4 2 0 0 4 0 0 0 0 2 2 0 0 0 0 0 17 0 1818.8847 Q14204 Q14204 1302 1318 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 5.2114E-57 346.65 By MS/MS 1.5 0.5 1 1 2 1705700 1705700 0 2987 1433 3092 7029;7030 5830;5831;5832 5832 3 456520 0 EALENCITLQDFNR ELKMAEIKVKLIEAKEALENCITLQDFNRA KEALENCITLQDFNRASELKEEIKALEDAR K E A N R A 1 1 2 1 1 1 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1721.8043 Q9BPX3 Q9BPX3 504 517 NCAPG Condensin complex subunit 3 yes yes 2 5.0403E-05 187.62 By MS/MS 4 0.816 1 1 1 3 1488000 1488000 0 2988 2279 3093 7031;7032;7033 5833 5833 1 109110 0 EALETERVR ATARLGDPSGRTKEREALETERVRANARAL GRTKEREALETERVRANARALRLGLEALAA R E A V R A 1 2 0 0 0 0 3 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 1 1101.5778 Q9Y2Z4 Q9Y2Z4 130 138 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.011851 116.25 By MS/MS By matching 7 0 2 1 1 2828600 2807600 21041 2989 2852 3094 7034;7035 5834 5834 1 44074 37895 EALGDAQQSVR YGNRAATLMMLGRFREALGDAQQSVRLDDS GRFREALGDAQQSVRLDDSFVRGHLREGKC R E A V R L 2 1 0 1 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1172.5786 Q99615 Q99615 80 90 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 8.6106E-05 153.1 By MS/MS By matching 6 0 2 1 1 5720800 5670500 50282 2990 2253 3095 7036;7037 5835 5835 1 38980 51524 EALIAASETLK LSRHNTAVSQLTKAKEALIAASETLKERKA TKAKEALIAASETLKERKAAIRDIEGKLPQ K E A L K E 3 0 0 0 0 0 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1144.634 Q9NTJ3 Q9NTJ3 525 535 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0012037 117.53 By MS/MS 3 0 1 1 765910 765910 0 2991 2575 3096 7038 5836 5836 1 14014 0 EALIAASETLKER LSRHNTAVSQLTKAKEALIAASETLKERKA AKEALIAASETLKERKAAIRDIEGKLPQTE K E A E R K 3 1 0 0 0 0 3 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 1 1429.7777 Q9NTJ3 Q9NTJ3 525 537 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0041531 129 By MS/MS 3 0 1 1 738940 738940 0 2992 2575 3097 7039 5837 5837 1 13521 0 EALLELLR TLVQRYKADLATDQKEALLELLRLQPHPQL DLATDQKEALLELLRLQPHPQLSPEIRREL K E A L R L 1 1 0 0 0 0 2 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 955.57023 Q13895 Q13895 399 406 BYSL Bystin yes yes 2 0.003262 133.55 By MS/MS 6.5 1.12 1 1 1 1 4 1771000 1771000 0 2993 1413 3098 7040;7041;7042;7043 5838 5838 1 12927 0 EALLGDTGTGDFLK WDDSHLDSAGREGDREALLGDTGTGDFLKA REALLGDTGTGDFLKAPQSFRAELSSILLL R E A L K A 1 0 0 2 0 0 1 3 0 0 3 1 0 1 0 0 2 0 0 0 0 0 14 0 1435.7195 O00400 O00400 50 63 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 5.1068E-05 187.42 By MS/MS 1.5 0.5 1 1 2 353800 353800 0 2994 102 3099 7044;7045 5839;5840 5839 2 103410 0 EALLGVQEDVDEYVK ELHYPLGERRSDYDREALLGVQEDVDEYVK EALLGVQEDVDEYVKLGHEEQQKRLQAIIK R E A V K L 1 0 0 2 0 1 3 1 0 0 2 1 0 0 0 0 0 0 1 3 0 0 15 0 1705.841 Q14257 Q14257 42 56 RCN2 Reticulocalbin-2 yes yes 2 9.528E-24 276.12 By MS/MS By MS/MS 6 0 2 1 1 4332300 4296100 36238 2995 1436 3100 7046;7047 5841;5842 5842 2 29532 37134 EALLLLEDIK YSLLIRGLIHSDRWREALLLLEDIKKVITP SDRWREALLLLEDIKKVITPSKKNYNDCIQ R E A I K K 1 0 0 1 0 0 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1155.6751 O15091 O15091 228 237 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 0.051823 71.451 By MS/MS 6 0 1 1 105400 105400 0 2996 159 3101 7048 5843 5843 1 724.55 0 EALLLLEDIKK YSLLIRGLIHSDRWREALLLLEDIKKVITP DRWREALLLLEDIKKVITPSKKNYNDCIQG R E A K K V 1 0 0 1 0 0 2 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 11 1 1283.7701 O15091 O15091 228 238 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 8.0641E-05 160.53 By MS/MS 6 0 1 1 1577000 1577000 0 2997 159 3102 7049 5844 5844 1 10840 0 EALLSSAVDHGSDEVK QTIIAGWREATKAAREALLSSAVDHGSDEV ALLSSAVDHGSDEVKFRQDLMNIAGTTLSS R E A V K F 2 0 0 2 0 0 2 1 1 0 2 1 0 0 0 3 0 0 0 2 0 0 16 0 1655.8002 P78371 P78371 139 154 CCT2 T-complex protein 1 subunit beta yes yes 2;3 8.5445E-09 238.07 By MS/MS By matching 6.43 0.728 5 1 1 6 1 65705000 65630000 75511 2998 1222 3103 7050;7051;7052;7053;7054;7055;7056 5845;5846;5847;5848 5848 4 468440 77377 EALLSSAVDHGSDEVKFR QTIIAGWREATKAAREALLSSAVDHGSDEV LSSAVDHGSDEVKFRQDLMNIAGTTLSSKL R E A F R Q 2 1 0 2 0 0 2 1 1 0 2 1 0 1 0 3 0 0 0 2 0 0 18 1 1958.9698 P78371 P78371 139 156 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 8.5341E-24 286.53 By MS/MS 6 0 3 3 45048000 45048000 0 2999 1222 3104 7057;7058;7059 5849;5850;5851 5851 3 309670 0 EALNSCNKR KGYAFIEFASFEDAKEALNSCNKREIEGRA SFEDAKEALNSCNKREIEGRAIRLELQGPR K E A K R E 1 1 2 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 1 1090.5189 P19338 P19338 538 546 NCL Nucleolin yes yes 2 0.015363 110.12 By MS/MS By matching 4 0 2 1 1 224480 194590 29886 3000 659 3105 7060;7061 5852 5852 1 18312 63677 EALNVINTHTK LHCKVVCLIQNGSFKEALNVINTHTKVLAN GSFKEALNVINTHTKVLANNSLSFEKAYCE K E A T K V 1 0 2 0 0 0 1 0 1 1 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1238.6619 O76094 O76094 63 73 SRP72 Signal recognition particle subunit SRP72 yes yes 2 4.9367E-13 229.82 By MS/MS 5 0 1 1 1440700 1440700 0 3001 362 3106 7062 5853 5853 1 14449 0 EALPDILTSIIR PAVAKLRRLLDSLPREALPDILTSIIRTSN LPREALPDILTSIIRTSNKEKLQILDAVSL R E A I R T 1 1 0 1 0 0 1 0 0 3 2 0 0 0 1 1 1 0 0 0 0 0 12 0 1339.7711 Q86WA8 Q86WA8 181 192 LONP2 Lon protease homolog 2, peroxisomal yes yes 2 0.028911 94.692 By MS/MS 4 0 1 1 0 0 0 3002 1838 3107 7063 5854 5854 1 0 0 EALQLMATYLPK TATASLGVIHKGHEKEALQLMATYLPKDTS HEKEALQLMATYLPKDTSPGSAYQEGGGLY K E A P K D 2 0 0 0 0 1 1 0 0 0 3 1 1 0 1 0 1 0 1 0 0 0 12 0 1376.7374 Q99460 Q99460 418 429 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 2.4333E-05 175.49 By MS/MS 4 0 1 1 511150 511150 0 3003 2246 3108 7064 5855 5855 1 48102 0 EALQPLLTQR KEYHRELERNYCRLREALQPLLTQRLPQLM YCRLREALQPLLTQRLPQLMAPTPPGLRNS R E A Q R L 1 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 10 0 1167.6612 Q96HP0 Q96HP0 2012 2021 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0097832 82.831 By MS/MS 2.5 0.5 1 1 2 491950 491950 0 3004 2166 3109 7065;7066 5856 5856 1 123850 0 EALSGGEASLVEK KATSTSTSGAGDVGKEALSGGEASLVEKVK GKEALSGGEASLVEKVKRGQRTATSLPVVN K E A E K V 2 0 0 0 0 0 3 2 0 0 2 1 0 0 0 2 0 0 0 1 0 0 13 0 1288.6511 Q96T17 Q96T17 243 255 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.0032177 108.9 By MS/MS 4 0 1 1 823670 823670 0 3005 2237 3110 7067 5857;5858 5858 2 77513 0 EALSPCPSTVSTK SKFLQDYDIRTGNTREALSPCPSTVSTKSQ TREALSPCPSTVSTKSQPGSSASSSSGVKM R E A T K S 1 0 0 0 1 0 1 0 0 0 1 1 0 0 2 3 2 0 0 1 0 0 13 0 1375.6653 Q08AD1 Q08AD1 670 682 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.039971 73.666 By MS/MS 2 0 1 1 190920 190920 0 3006 1314 3111 7068 5859 5859 1 64578 0 EALTYDGALLGDR KGFCYVEFDEVDSLKEALTYDGALLGDRSL LKEALTYDGALLGDRSLRVDIAEGRKQDKG K E A D R S 2 1 0 2 0 0 1 2 0 0 3 0 0 0 0 0 1 0 1 0 0 0 13 0 1392.6885 Q15056 Q15056 97 109 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.00034542 147.62 By MS/MS 8.5 0.5 1 1 2 5266700 5266700 0 3007 1485 3112 7069;7070 5860 5860 1 67700 0 EANAFEEQLLK HEQWVNEDRHYMKRKEANAFEEQLLKQKMD MKRKEANAFEEQLLKQKMDELHKKLHQVVE K E A L K Q 2 0 1 0 0 1 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 11 0 1290.6456 O43683 O43683 280 290 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 3.7161E-09 210.08 By MS/MS 3 0 1 1 229000 229000 0 3008 227 3113 7071 5861 5861 1 4190.1 0 EANEILQR KREDLVVAPAGITLKEANEILQRSKKGKLP PAGITLKEANEILQRSKKGKLPIVNEDDEL K E A Q R S 1 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 971.50361 P12268;P20839 P12268 196 203 IMPDH2;IMPDH1 Inosine-5-monophosphate dehydrogenase 2;Inosine-5-monophosphate dehydrogenase 1 yes no 2 0.0043283 128.61 By MS/MS By MS/MS 6 0 2 1 1 3696900 3644300 52571 3009 590 3114 7072;7073 5862;5863 5863 2 25052 53871 EANLAASFGK ARVCHAHPTLSEAFREANLAASFGKSINF_ SEAFREANLAASFGKSINF___________ R E A G K S 3 0 1 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1006.5084 P09622 P09622 496 505 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.010345 93.556 By MS/MS 6 0 1 1 2202900 2202900 0 3010 539 3115 7074 5864 5864 1 15144 0 EANLLNAVIVQR TFPNKELADESQTLKEANLLNAVIVQRLT_ TLKEANLLNAVIVQRLT_____________ K E A Q R L 2 1 2 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1338.7619 Q9UNZ2 Q9UNZ2 357 368 NSFL1C NSFL1 cofactor p47 yes yes 2 1.3636E-05 178.84 By MS/MS 7 0 1 1 348940 348940 0 3011 2796 3116 7075 5865 5865 1 5477.7 0 EANNFLWPFK EDLIHEIYTVGKRFKEANNFLWPFKLSSPR GKRFKEANNFLWPFKLSSPRGGMKKKTTHF K E A F K L 1 0 2 0 0 0 1 0 0 0 1 1 0 2 1 0 0 1 0 0 0 0 10 0 1264.6241 P18124 P18124 203 212 RPL7 60S ribosomal protein L7 yes yes 2 0.00025 143.73 By MS/MS 8 0 1 1 165130 165130 0 3012 652 3117 7076 5866 5866 1 2084.7 0 EANQAINPK PNNIKQVSDLISVLREANQAINPKLLQLVE LISVLREANQAINPKLLQLVEDRGSGRSRG R E A P K L 2 0 2 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 9 0 983.50361 P17844 P17844 462 470 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.0051212 109.01 By MS/MS 4.5 0.5 1 1 2 1786600 1786600 0 3013 646 3118 7077;7078 5867 5867 1 30641 0 EANSIIITPGYGLCAAK THTEINLDNAIDMIREANSIIITPGYGLCA NSIIITPGYGLCAAKAQYPIADLVKMLTEQ R E A A K A 3 0 1 0 1 0 1 2 0 3 1 1 0 0 1 1 1 0 1 0 0 0 17 0 1776.908 Q13423 Q13423 923 939 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 8.0086E-07 205.72 By MS/MS 1.5 0.5 1 1 2 199860 199860 0 3014 1381 3119 7079;7080 5868;5869 5868 2 57778 0 EAPASVVPFVR SPVRVKREFEPASAREAPASVVPFVRVKRE ASAREAPASVVPFVRVKREREVDEDSEPER R E A V R V 2 1 0 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 3 0 0 11 0 1170.6397 Q53GS9 Q53GS9 61 71 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 2 0.00063532 128.86 By MS/MS 5.5 0.5 1 1 2 1803500 1803500 0 3015 1588 3120 7081;7082 5870 5870 1 15576 0 EAPATQASSTTQLTDTQVLAAENK GVSKATEVSKTPEAREAPATQASSTTQLTD TTQLTDTQVLAAENKSLAADTKKQNADPQA R E A N K S 5 0 1 1 0 3 2 0 0 0 2 1 0 0 1 2 5 0 0 1 0 0 24 0 2474.2136 Q9UNF1 Q9UNF1 77 100 MAGED2 Melanoma-associated antigen D2 yes yes 3 2.4275E-12 222.54 By MS/MS 5 0 1 1 2321800 2321800 0 3016 2787 3121 7083 5871 5871 1 23287 0 EAPCVLIYIPDGHTK ICDQPYEPVSPYSCKEAPCVLIYIPDGHTK EAPCVLIYIPDGHTKEMPTSGSKEKTKVEA K E A T K E 1 0 0 1 1 0 1 1 1 2 1 1 0 0 2 0 1 0 1 1 0 0 15 0 1711.8603 P07814 P07814 694 708 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00060508 179.6 By MS/MS 3.5 0.5 1 1 2 682930 682930 0 3017 512 3122 7084;7085 5872;5873;5874 5874 3 58139 0 EAPDGCPDHVLR DAVGFTFPNRLLTTKEAPDGCPDHVLRALG TTKEAPDGCPDHVLRALGVALLACFCSDPE K E A L R A 1 1 0 2 1 0 1 1 1 0 1 0 0 0 2 0 0 0 0 1 0 0 12 0 1364.6143 Q9UBB6 Q9UBB6 93 104 NCDN Neurochondrin yes yes 2 0.0019642 94.616 By MS/MS 5 0 1 1 349950 349950 0 3018 2694 3123 7086 5875 5875 1 3509.8 0 EAPEGWQTPK FEKDLRRIWLKAGLKEAPEGWQTPKIYLRG KAGLKEAPEGWQTPKIYLRGK_________ K E A P K I 1 0 0 0 0 1 2 1 0 0 0 1 0 0 2 0 1 1 0 0 0 0 10 0 1141.5404 Q9NWT8 Q9NWT8 184 193 AURKAIP1 Aurora kinase A-interacting protein yes yes 2 0.00075884 128.28 By MS/MS 9.5 0.5 1 1 2 566890 566890 0 3019 2612 3124 7087;7088 5876 5876 1 26954 0 EAPETDTSPSLWDVEFAK TGKRLNIFDMMAVTKEAPETDTSPSLWDVE ETDTSPSLWDVEFAKQLATVNEQPLQNGFE K E A A K Q 2 0 0 2 0 0 3 0 0 0 1 1 0 1 2 2 2 1 0 1 0 0 18 0 2020.9266 Q92665 Q92665 267 284 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 5.3094E-12 246.25 By MS/MS 7.5 0.5 1 1 2 2064000 2064000 0 3020 2067 3125 7089;7090 5877;5878 5878 2 32068 0 EAPNPIHLTVDTSLQNGR DITEHSVLIHEYYSREAPNPIHLTVDTSLQ NPIHLTVDTSLQNGRMSIKAYVSTLMGVPG R E A G R M 1 1 2 1 0 1 1 1 1 1 2 0 0 0 2 1 2 0 0 1 0 0 18 0 1960.9967 O00303 O00303 193 210 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2;3 3.8799E-11 260.5 By MS/MS 6.33 0.471 2 1 3 16319000 16319000 0 3021 99 3126 7091;7092;7093 5879;5880;5881 5880 3 128960 0 EAPPMEKPEVVK RKQHSLLKRLRKAKKEAPPMEKPEVVKTHL AKKEAPPMEKPEVVKTHLRDMIILPEMVGS K E A V K T 1 0 0 0 0 0 3 0 0 0 0 2 1 0 3 0 0 0 0 2 0 0 12 1 1352.701 P62841 P62841 66 77 RPS15 40S ribosomal protein S15 yes yes 2 0.0012293 147.3 By MS/MS 9.5 0.5 1 1 2 2300000 2300000 0 3022 1174 3127 7094;7095 5882 5882 1 53116 0 EAPVDVLTQIGR AQSRRDFAPPGQQKREAPVDVLTQIGRSVR QKREAPVDVLTQIGRSVRGTLDAWIGPETM R E A G R S 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 12 0 1296.7038 Q9BVC6 Q9BVC6 48 59 TMEM109 Transmembrane protein 109 yes yes 2 2.5939E-06 195.27 By MS/MS By matching 9.25 0.433 3 1 3 1 11187000 11150000 36465 3023 2332 3128 7096;7097;7098;7099 5883;5884;5885 5883 3 222030 83151 EAQDTSDGIIQK SPANQRRHLLGFSAKEAQDTSDGIIQKNSY SAKEAQDTSDGIIQKNSYRYDHSVSNDKAL K E A Q K N 1 0 0 2 0 2 1 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 12 0 1303.6256 P18850 P18850 425 436 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.00012257 155.53 By MS/MS 4 0 1 1 720460 720460 0 3024 656 3129 7100 5886 5886 1 67800 0 EAQLQSR DTLSPEERRARLRKREAQLQSRKEYEQELS RRARLRKREAQLQSRKEYEQELSDDLHVER R E A S R K 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 830.42463 Q7Z7F7 Q7Z7F7 97 103 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 2 0.015165 121.99 By MS/MS 9.5 0.5 1 1 2 1980800 1980800 0 3025 1805 3130 7101;7102 5887 5887 1 102200 0 EAQNLSAMEIR HGLPIEIKVLSELGREAQNLSAMEIRKKAR ELGREAQNLSAMEIRKKARSFAKAAIEKQK R E A I R K 2 1 1 0 0 1 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 11 0 1260.6132 Q9NSE4 Q9NSE4 171 181 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 3.1519E-08 203.02 By MS/MS 4 0 2 2 2371200 2371200 0 3026 2570 3131;3132 7103;7104 5888;5889 5889 1112 2 223150 0 EAQQYSEALASTR KHGVPPLKLCKNLNREAQQYSEALASTRIL NREAQQYSEALASTRILKHSPESSRGQCGE R E A T R I 3 1 0 0 0 2 2 0 0 0 1 0 0 0 0 2 1 0 1 0 0 0 13 0 1452.6845 Q9H4G4 Q9H4G4 38 50 GLIPR2 Golgi-associated plant pathogenesis-related protein 1 yes yes 2 0.00019422 163.45 By MS/MS 10 0 1 1 302650 302650 0 3027 2445 3133 7105 5890 5890 1 16312 0 EAQTLDSQIQETSI GLNGHPTLSGGGDQREAQTLDSQIQETSI_ REAQTLDSQIQETSI_______________ R E A S I - 1 0 0 1 0 3 2 0 0 2 1 0 0 0 0 2 2 0 0 0 0 0 14 0 1561.7471 P27816 P27816 1139 1152 MAP4 Microtubule-associated protein 4 yes yes 2 3.2481E-11 237.67 By MS/MS 2.5 0.5 1 1 2 464130 464130 0 3028 746 3134 7106;7107 5891 5891 1 133460 0 EAREDLEVHQAK TEAEKVFMVARGLVREAREDLEVHQAKLKE LVREAREDLEVHQAKLKEVRDRLDRVSRED R E A A K L 2 1 0 1 0 1 3 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 12 1 1423.7056 Q96ER9 Q96ER9 118 129 CCDC51 Coiled-coil domain-containing protein 51 yes yes 3 0.00024695 128.88 By MS/MS 7 0 1 1 1207200 1207200 0 3029 2149 3135 7108 5892 5892 1 18951 0 EASADLSPYVR IRVPIIVPIMMLAIKEASADLSPYVRKNAA LAIKEASADLSPYVRKNAAHAIQKLYSLDP K E A V R K 2 1 0 1 0 0 1 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1206.5881 O00203 O00203 157 167 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.00036595 134.23 By MS/MS 3.5 0.5 1 1 2 2006700 2006700 0 3030 90 3136 7109;7110 5893 5893 1 106960 0 EASAVLFTITK ELLDKILRQKFFSEREASAVLFTITKTVEY FSEREASAVLFTITKTVEYLHAQGVVHRDL R E A T K T 2 0 0 0 0 0 1 0 0 1 1 1 0 1 0 1 2 0 0 1 0 0 11 0 1178.6547 P51812 P51812 515 525 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0018053 112.36 By MS/MS 5 0 1 1 430810 430810 0 3031 1008 3137 7111 5894 5894 1 4320.8 0 EASDPQPEEADGGLK DPRNKISFKFDHLRKEASDPQPEEADGGLK EASDPQPEEADGGLKSWRESCDSALRAYVK K E A L K S 2 0 0 2 0 1 3 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 15 0 1541.6845 P52907 P52907 104 118 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 2 3.5891E-05 195.77 By MS/MS 7 0 1 1 1545600 1545600 0 3032 1025 3138 7112 5895;5896 5896 2 24263 0 EASFEYLQNEGER FFVRAIIRHSDLVTKEASFEYLQNEGERLL TKEASFEYLQNEGERLLLEAMDELEVAFNN K E A E R L 1 1 1 0 0 1 4 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 13 0 1570.69 Q13085;O00763 Q13085 1436 1448 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 2 0.00044426 137.4 By MS/MS 1 0 1 1 211310 211310 0 3033 1351 3139 7113 5897;5898 5898 2 50919 0 EASKQADVNLVNAK AGNCLSPAVIVGLLKEASKQADVNLVNAKL KEASKQADVNLVNAKLLVKEAGLNVTTSHS K E A A K L 3 0 2 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 14 1 1485.7787 O43175 O43175 381 394 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 1.1173E-06 216.91 By MS/MS 6.33 0.471 2 1 3 4506100 4506100 0 3034 195 3140 7114;7115;7116 5899;5900 5900 2 33504 0 EATAGNPGGQTVR SDMELLFDIFLETVKEATAGNPGGQTVRER VKEATAGNPGGQTVRERLTERLCPPGIPTP K E A V R E 2 1 1 0 0 1 1 3 0 0 0 0 0 0 1 0 2 0 0 1 0 0 13 0 1256.6109 P27708 P27708 359 371 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.5324E-07 206.36 By MS/MS 3 1.41 1 1 1 1 1 5 2168400 2168400 0 3035 745 3141 7117;7118;7119;7120;7121 5901;5902;5903 5902 3 459080 0 EATAQKPTGSVGSTVTTPPPLVR KLVLLKKLRQSQIQKEATAQKPTGSVGSTV GSVGSTVTTPPPLVRGTQNIPAGKPSLQTS K E A V R G 2 1 0 0 0 1 1 2 0 0 1 1 0 0 4 2 5 0 0 3 0 0 23 1 2293.2278 Q86YP4 Q86YP4 173 195 GATAD2A Transcriptional repressor p66-alpha yes yes 3 0.0054305 71.001 By MS/MS 5 0 1 1 2053500 2053500 0 3036 1853 3142 7122 5904 5904 1 20596 0 EATEQEIR ______________________________ FIGNLPREATEQEIRSLFEQYGKVLECDII R E A I R S 1 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 8 0 974.46689 Q9BWF3;Q9BQ04 Q9BWF3 12 19 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.0075442 113.71 By MS/MS 7 0 1 1 1819600 1819600 0 3037 2347 3143 7123 5905 5905 1 28564 0 EATKGFYDKDSSGWSSSK TASKGRYIPPHLRNREATKGFYDKDSSGWS KGFYDKDSSGWSSSKDKDAYSSFGSRSDSR R E A S K D 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 5 1 1 1 0 0 0 18 2 1978.8909 O00571 O00571 47 64 DDX3X ATP-dependent RNA helicase DDX3X yes yes 3 0.01028 85.176 By MS/MS 5 0 1 1 1902500 1902500 0 3038 116 3144 7124 5906 5906 1 19081 0 EATPVVHETEPESGSQPR EEPVFTRQDSNRSEKEATPVVHETEPESGS PVVHETEPESGSQPRPAVLSGYFKQFQKSL K E A P R P 1 1 0 0 0 1 4 1 1 0 0 0 0 0 3 2 2 0 0 2 0 0 18 0 1948.9126 Q9Y520 Q9Y520 639 656 PRRC2C Protein PRRC2C yes yes 3 0.0042233 93.181 By MS/MS 2 0.816 1 1 1 3 912750 912750 0 3039 2905 3145 7125;7126;7127 5907;5908 5908 2 241550 0 EATQILSVPK RQLPSLACKYPVSSREATQILSVPKVDDEI PVSSREATQILSVPKVDDEILGFISEATPL R E A P K V 1 0 0 0 0 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1084.6128 P42166 P42166 526 535 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0098398 94.692 By MS/MS 5 0 1 1 1577400 1577400 0 3040 875 3146 7128 5909 5909 1 15820 0 EATTEFSVDAR VQCYGPGIEGQGVFREATTEFSVDARALTQ GVFREATTEFSVDARALTQTGGPHVKARVA R E A A R A 2 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 11 0 1224.5622 P21333 P21333 1273 1283 FLNA Filamin-A yes yes 2 1.2234E-06 187.99 By MS/MS 2 0.707 1 2 1 4 7223400 7223400 0 3041 677 3147 7129;7130;7131;7132 5910;5911;5912 5911 3 1798600 0 EATVQEVDVIPEDGAADVR LRVRLAGAQLSWLYKEATVQEVDVIPEDGA QEVDVIPEDGAADVRVIISNSAYGKFRKLF K E A V R V 3 1 0 3 0 1 3 1 0 1 0 0 0 0 1 0 1 0 0 4 0 0 19 0 2011.9698 O43824 O43824 481 499 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0091911 85.006 By MS/MS 6 0 1 1 4443700 4443700 0 3042 240 3148 7133 5913 5913 1 30547 0 EAVAHENNR KNAKQFEQAKDACLREAVAHENNRALFHAA KDACLREAVAHENNRALFHAAKAYEQAGMM R E A N R A 2 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1038.4843 Q99747 Q99747 61 69 NAPG Gamma-soluble NSF attachment protein yes yes 2 0.00075174 138.98 By MS/MS 7 0 1 1 210520 210520 0 3043 2265 3149 7134 5914 5914 1 3304.8 0 EAVAMESYAK MAHAVTQLANRTPGKEAVAMESYAKALRML RTPGKEAVAMESYAKALRMLPTIIADNAGY K E A A K A 3 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 10 0 1097.5063 P78371 P78371 432 441 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0075759 109.48 By MS/MS By matching 6.25 0.433 3 1 3 1 13985000 13940000 45647 3044 1222 3150;3151 7135;7136;7137;7138 5915;5916 5916 713 2 97694 46776 EAVAPVQEESDLEK RKEEERKKKETDQKKEAVAPVQEESDLEKK KEAVAPVQEESDLEKKRREAEALLQSMGLT K E A E K K 2 0 0 1 0 1 4 0 0 0 1 1 0 0 1 1 0 0 0 2 0 0 14 0 1542.7413 Q13409 Q13409 42 55 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 5.0812E-11 231.66 By MS/MS 5 0 1 1 2024900 2024900 0 3045 1379 3152 7139 5917 5917 1 20309 0 EAVCIVLSDDTCSDEK LFRGDTVLLKGKKRREAVCIVLSDDTCSDE AVCIVLSDDTCSDEKIRMNRVVRNNLRVRL R E A E K I 1 0 0 3 2 0 2 0 0 1 1 1 0 0 0 2 1 0 0 2 0 0 16 0 1839.7866 P55072 P55072 66 81 VCP Transitional endoplasmic reticulum ATPase yes yes 2 3.8296E-33 304.89 By MS/MS 4 0 1 1 2450900 2450900 0 3046 1054 3153 7140 5918 5918 1 230650 0 EAVELPLTHFELYK YADIGGMDIQKQEVREAVELPLTHFELYKQ REAVELPLTHFELYKQIGIDPPRGVLMYGP R E A Y K Q 1 0 0 0 0 0 3 0 1 0 3 1 0 1 1 0 1 0 1 1 0 0 14 0 1687.8821 P43686 P43686 179 192 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.00045448 148.28 By MS/MS 6 0 1 1 3988700 3988700 0 3047 900 3154 7141 5919 5919 1 27419 0 EAVGDLLDAFK SVPKRRRKIKELNKKEAVGDLLDAFKEANP LNKKEAVGDLLDAFKEANPAVPEVENQPPA K E A F K E 2 0 0 2 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1176.6027 Q04637 Q04637 525 535 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 3.0515E-05 177.7 By MS/MS 2.71 1.28 1 3 1 1 1 7 7194700 7194700 0 3048 1291 3155 7142;7143;7144;7145;7146;7147;7148 5920;5921;5922;5923;5924;5925 5923 6 2199900 0 EAVGGQAEDHLK EMQQRVIKKSKDMAKEAVGGQAEDHLKLKD MAKEAVGGQAEDHLKLKDGQQQNETKKKKG K E A L K L 2 0 0 1 0 1 2 2 1 0 1 1 0 0 0 0 0 0 0 1 0 0 12 0 1252.6048 Q8IWC1 Q8IWC1 640 651 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.0046216 130.01 By MS/MS 3 0 1 1 0 0 0 3049 1866 3156 7149 5926 5926 1 0 0 EAVLLNLK IKSEEAKRQQLGIEKEAVLLNLKSNQELSE QQLGIEKEAVLLNLKSNQELSEQGTSFSQT K E A L K S 1 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 898.54877 Q9H9J2 Q9H9J2 113 120 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.03848 86.866 By MS/MS By matching 8 0 2 1 1 4307000 4249600 57462 3050 2487 3157 7150;7151 5927 5927 1 53651 77542 EAVLNAYR RRMLPLIWSKEPGVREAVLNAYRQLYLNPK SKEPGVREAVLNAYRQLYLNPKGDSARAKA R E A Y R Q 2 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 934.48723 Q15021 Q15021 691 698 NCAPD2 Condensin complex subunit 1 yes yes 2 0.005242 124.37 By MS/MS 3.5 0.5 1 1 2 3088500 3088500 0 3051 1474 3158 7152;7153 5928 5928 1 121740 0 EAVLSCSQALK WYHLAEAQVKMHRPKEAVLSCSQALKIVDN HRPKEAVLSCSQALKIVDNLGASGNSLYQR K E A L K I 2 0 0 0 1 1 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1204.6122 Q6PGP7 Q6PGP7 324 334 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 7.5725E-05 154.01 By MS/MS 3 0 1 1 1518300 1518300 0 3052 1716 3159 7154 5929 5929 1 27780 0 EAVQLVNTR LHLLTQEALSIHGVKEAVQLVNTREEVEDL SIHGVKEAVQLVNTREEVEDLCRLDKMIDL K E A T R E 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 9 0 1028.5615 P54886 P54886 531 539 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0014259 128.6 By MS/MS By MS/MS 5 0 4 2 2 6590200 6378800 211460 3053 1048 3160 7155;7156;7157;7158 5930;5931 5931 2 63976 177580 EAVQLVNTREEVEDLCR LHLLTQEALSIHGVKEAVQLVNTREEVEDL VQLVNTREEVEDLCRLDKMIDLIIPRGSSQ K E A C R L 1 2 1 1 1 1 4 0 0 0 2 0 0 0 0 0 1 0 0 3 0 0 17 1 2059.0004 P54886 P54886 531 547 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.0028173 158.86 By MS/MS 5 0 2 2 9165800 9165800 0 3054 1048 3161 7159;7160 5932;5933 5933 2 91928 0 EAVQLVNTREEVEDLCRLDK LHLLTQEALSIHGVKEAVQLVNTREEVEDL VNTREEVEDLCRLDKMIDLIIPRGSSQLVR K E A D K M 1 2 1 2 1 1 4 0 0 0 3 1 0 0 0 0 1 0 0 3 0 0 20 2 2415.2064 P54886 P54886 531 550 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.0026091 89.374 By MS/MS 5 0 1 1 980620 980620 0 3055 1048 3162 7161 5934 5934 1 9835.2 0 EAVTFLR MYVALTYDHRLIDGREAVTFLRKIKAAVED DHRLIDGREAVTFLRKIKAAVEDPRVLLLD R E A L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 834.45995 P36957 P36957 431 437 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.043896 94.262 By MS/MS By matching 6 0 2 1 1 3569400 3364600 204740 3056 842 3163 7162;7163 5935 5935 1 23129 209800 EAVTHIGR KGDKIAIWTTECENREAVTHIGRVYKERLG TTECENREAVTHIGRVYKERLGLPPKIVIG R E A G R V 1 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 881.47191 P06730 P06730 174 181 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.00036994 161.68 By MS/MS 8.5 0.5 1 1 2 10763000 10763000 0 3057 499 3164 7164;7165 5936;5937 5936 2 147030 0 EAYMGNVLQGGEGQAPTR QGAIEKAGIPKEEVKEAYMGNVLQGGEGQA MGNVLQGGEGQAPTRQAVLGAGLPISTPCT K E A T R Q 2 1 1 0 0 2 2 4 0 0 1 0 1 0 1 0 1 0 1 1 0 0 18 0 1876.8738 P24752 P24752 88 105 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 3.2722E-57 346.06 By MS/MS By matching 7 0 3 2 1 5341900 5298400 43461 3058 716 3165;3166 7166;7167;7168 5938;5939 5938 354 2 83175 78272 EAYNQGLKK KGQIEEQKEMMEKAREAYNQGLKKCPHSTP MMEKAREAYNQGLKKCPHSTPLWLLLSRLE R E A K K C 1 0 1 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 9 1 1049.5506 O94906 O94906 730 738 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.049751 92.47 By MS/MS 4 0 1 1 666520 666520 0 3059 376 3167 7169 5940 5940 1 62724 0 EAYPEEAYIADLDAK KVKWGDIEFPPPFGREAYPEEAYIADLDAK EAYPEEAYIADLDAKSGASLKLTLLNPKGR R E A A K S 4 0 0 2 0 0 3 0 0 1 1 1 0 0 1 0 0 0 2 0 0 0 15 0 1696.7832 P53396 P53396 245 259 ACLY ATP-citrate synthase yes yes 2;3 2.6632E-06 216.84 By MS/MS 4.29 1.83 1 1 2 1 1 1 7 13466000 13466000 0 3060 1030 3168 7170;7171;7172;7173;7174;7175;7176 5941;5942;5943;5944;5945;5946 5945 6 1133200 0 EAYPGDVFYLHSR AYRQMSLLLRRPPGREAYPGDVFYLHSRLL GREAYPGDVFYLHSRLLERAAKMNDAFGGG R E A S R L 1 1 0 1 0 0 1 1 1 0 1 0 0 1 1 1 0 0 2 1 0 0 13 0 1552.731 P25705 P25705 335 347 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.00013302 169.82 By MS/MS 6.75 0.829 4 2 2 8 215610000 215610000 0 3061 723 3169 7177;7178;7179;7180;7181;7182;7183;7184 5947;5948;5949;5950;5951;5952;5953;5954 5948 8 1563300 0 EAYTAVVYHNR MPVIFGKSSCSEFSKEAYTAVVYHNRSPDF EFSKEAYTAVVYHNRSPDFHEEIKVKLPAT K E A N R S 2 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 2 2 0 0 11 0 1321.6415 Q96N67 Q96N67 614 624 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 5.7762E-05 155.58 By MS/MS 3 0.816 1 1 1 3 1765200 1765200 0 3062 2201 3170 7185;7186;7187 5955 5955 1 461620 0 EAYYWLR ARGGDGSRIIFDDFREAYYWLRHNTPEDAK RIIFDDFREAYYWLRHNTPEDAKVMSWWDY R E A L R H 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 7 0 999.48142 P46977 P46977 507 513 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.046647 92.191 By MS/MS 1.5 0.5 1 1 2 167700 167700 0 3063 923 3171 7188;7189 5956 5956 1 49197 0 ECADLWPR KGEMKGSAITGPVAKECADLWPRIASNAGS ITGPVAKECADLWPRIASNAGSIA______ K E C P R I 1 1 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 8 0 1045.4651 P62829 P62829 124 131 RPL23 60S ribosomal protein L23 yes yes 2 0.018523 101.28 By MS/MS 10 0 1 1 3020300 3020300 0 3064 1173 3172 7190 5957 5957 1 162780 0 ECEGIVPVPLAEK IRGNIVKHPLTQELKECEGIVPVPLAEKLY LKECEGIVPVPLAEKLYSTKKRKK______ K E C E K L 1 0 0 0 1 0 3 1 0 1 1 1 0 0 2 0 0 0 0 2 0 0 13 0 1439.733 P82932 P82932 104 116 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.00038068 170.52 By MS/MS 10 0 1 1 4794600 4794600 0 3065 1238 3173 7191 5958 5958 1 258410 0 ECELSPGVNR NIKEICWNLQNIRLRECELSPGVNRDLTRR NIRLRECELSPGVNRDLTRRVRNINGITQH R E C N R D 0 1 1 0 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1159.5292 Q9BXP5 Q9BXP5 489 498 SRRT Serrate RNA effector molecule homolog yes yes 2 0.0085324 97.635 By MS/MS 3 0 1 1 353370 353370 0 3066 2358 3174 7192 5959 5959 1 6465.7 0 ECGHDVTCPVAK ADKILSTGKYLNVVRECGHDVTCPVAKEII VVRECGHDVTCPVAKEIIYTLKERAYVEQI R E C A K E 1 0 0 1 2 0 1 1 1 0 0 1 0 0 1 0 1 0 0 2 0 0 12 0 1371.5911 Q9BSJ2 Q9BSJ2 462 473 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 3.266E-05 172.88 By MS/MS 4 0 1 1 901430 901430 0 3067 2307 3175 7193 5960 5960 1 84831 0 ECGNAHYQR MLTGQERVALANRKRECGNAHYQRADFVLA LANRKRECGNAHYQRADFVLAANSYDLAIK R E C Q R A 1 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1133.4672 Q14318 Q14318 226 234 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.00057591 144.38 By MS/MS 6 0 1 1 1273900 1273900 0 3068 1438 3176 7194 5961 5961 1 8756.9 0 ECLAETER ERLKRGIIHARGLVRECLAETERNARS___ HARGLVRECLAETERNARS___________ R E C E R N 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 1006.439 O14519;O75956 O14519 104 111 CDK2AP1;CDK2AP2 Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 yes no 2 0.044512 84.568 By MS/MS 10 0 1 1 984640 984640 0 3069 122 3177 7195 5962 5962 1 53068 0 ECLPLIIFLR GVFAPRPSTGPHKLRECLPLIIFLRNRLKY PHKLRECLPLIIFLRNRLKYALTGDEVKKI R E C L R N 0 1 0 0 1 0 1 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 10 0 1272.7264 P62701 P62701 40 49 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 7.3172E-05 155.75 By MS/MS 8 0 1 1 1208300 1208300 0 3070 1165 3178 7196 5963;5964 5963 2 15255 0 ECLTLLSQR EDEEELEKELYREARECLTLLSQRLGSQKF LYREARECLTLLSQRLGSQKFFFGDAPASL R E C Q R L 0 1 0 0 1 1 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1118.5754 Q13505 Q13505 325 333 MTX1 Metaxin-1 yes yes 2 1.6556E-05 157.91 By MS/MS 7.5 0.5 1 1 2 2025200 2025200 0 3071 1392 3179 7197;7198 5965;5966 5965 2 25568 0 ECPAIDYTR TEQWIFLCAAHKTPKECPAIDYTRHTLDGA AHKTPKECPAIDYTRHTLDGAACLLNSNKY K E C T R H 1 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 9 0 1123.4968 Q9Y3A3 Q9Y3A3 118 126 MOB4 MOB-like protein phocein yes yes 2 0.0047215 109.71 By MS/MS 8.5 0.5 1 1 2 1621700 1621700 0 3072 2861 3180 7199;7200 5967 5967 1 29043 0 ECPSDECGAGVFMASHFDR YYKVDENGKISRLRRECPSDECGAGVFMAS DECGAGVFMASHFDRHYCGKCCLTYCFNKP R E C D R H 2 1 0 2 2 0 2 2 1 0 0 0 1 2 1 2 0 0 0 1 0 0 19 0 2170.8507 P62979 P62979 120 138 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 3 0.0021765 97.214 By MS/MS 10 0 2 2 3302900 3302900 0 3073 1190 3181;3182 7201;7202 5968;5969;5970 5969 690 3 178010 0 ECREPELGLEELLR GALCSLVTDFPQGVRECREPELGLEELLRH RECREPELGLEELLRHRCQLLQQHEEYQEE R E C L R H 0 2 0 0 1 0 5 1 0 0 4 0 0 0 1 0 0 0 0 0 0 0 14 1 1741.8669 Q9NZL4 Q9NZL4 309 322 HSPBP1 Hsp70-binding protein 1 yes yes 3 0.00026369 162.48 By MS/MS 7 0 1 1 97318 97318 0 3074 2651 3183 7203 5971 5971 1 1527.7 0 ECSDVQPK VELKKANPDLPILIRECSDVQPKLWARYAF DLPILIRECSDVQPKLWARYAFGQETNVPL R E C P K L 0 0 0 1 1 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 8 0 961.4175 O43678 O43678 57 64 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 2 0.026461 92.47 By MS/MS 10 0 1 1 332210 332210 0 3075 225 3184 7204 5972;5973 5972 2 17905 0 ECSLQVPEDELVSTLK ______________________________ CSLQVPEDELVSTLKQLVSEKLNVPVRQQR R E C L K Q 0 0 0 1 1 1 3 0 0 0 3 1 0 0 1 2 1 0 0 2 0 0 16 0 1845.903 P11441 P11441 12 27 UBL4A Ubiquitin-like protein 4A yes yes 2 0.0047277 111.94 By MS/MS 9.5 0.5 1 1 2 138970 138970 0 3076 579 3185 7205;7206 5974 5974 1 5376.6 0 ECTIQEK VICGGPGVSDAYYCKECTIQEKDRDGCPKI VSDAYYCKECTIQEKDRDGCPKIVNLGSSK K E C E K D 0 0 0 0 1 1 2 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 7 0 906.41168 Q7RTV0 Q7RTV0 74 80 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 0.048731 90.777 By MS/MS 10 0 1 1 249920 249920 0 3077 1776 3186 7207 5975 5975 1 13470 0 ECVGASNQNCR PSTVALWLVDPLTVKECVGASNQNCRTPDA LTVKECVGASNQNCRTPDAVELCKKLGGSC K E C C R T 1 1 2 0 2 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1293.519 O00400 O00400 478 488 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 0.032828 78.939 By MS/MS 1.5 0.5 1 1 2 150050 150050 0 3078 102 3187 7208;7209 5976 5976 1 43506 0 ECVLPGGETAGDMGK QFSNLEALLIQIGPKECVLPGGETAGDMGK ECVLPGGETAGDMGKLRQIIQRGGILITER K E C G K L 1 0 0 1 1 0 2 4 0 0 1 1 1 0 1 0 1 0 0 1 0 0 15 0 1519.6647 P43246 P43246 198 212 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0062782 99.215 By MS/MS 4 0 2 2 1069800 1069800 0 3079 894 3188;3189 7210;7211 5977;5978 5977 475 2 100670 0 ECVQPATK ETLKFVARNYLEPGKECVQPATKSCSFSAC NYLEPGKECVQPATKSCSFSACTDGISWPF K E C T K S 1 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 8 0 931.44332 P16615 P16615 996 1003 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.025647 93.374 By MS/MS 2 0.816 1 1 1 3 572390 572390 0 3080 635 3190 7212;7213;7214 5979 5979 1 149840 0 ECVQQLAENTR SMKCIMGQDGTSLGKECVQQLAENTRYFRR SLGKECVQQLAENTRYFRRRLKEMGFIIYG K E C T R Y 1 1 1 0 1 2 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1346.6249 O15270 O15270 437 447 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 2.2275E-18 250.92 By MS/MS 6 0 1 1 3169700 3169700 0 3081 178 3191 7215 5980 5980 1 21790 0 EDAANNYAR TYRQLFHPEQLITGKEDAANNYARGHYTIG QLITGKEDAANNYARGHYTIGKEIIDLVLD K E D A R G 3 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1022.4417 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;A6NHL2 Q9BQE3 97 105 TUBA1B;TUBA4A;TUBA1A;TUBA8;TUBA1C;TUBAL3 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3 no no 2 5.391E-05 178.99 By MS/MS By MS/MS 6.71 2.71 1 2 1 1 1 1 6 1 29810000 29167000 642660 3082 1210;1751;2290;1211;22 3192 7216;7217;7218;7219;7220;7221;7222 5981;5982;5983;5984;5985;5986 5981 6 373370 658540 EDAENLAAAQR QTIDNIVFFPATSKKEDAENLAAAQRDAVD TSKKEDAENLAAAQRDAVDFDVRVDTQDQG K E D Q R D 4 1 1 1 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1186.5578 Q9Y6D6 Q9Y6D6 1644 1654 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 7.378E-07 194.12 By MS/MS 2 0 1 1 137810 137810 0 3083 2941 3193 7223 5987 5987 1 46612 0 EDAFYSWESSK LRMFFDALYDEDVVKEDAFYSWESSKDPAE DVVKEDAFYSWESSKDPAEQQGKGVALKSV K E D S K D 1 0 0 1 0 0 2 0 0 0 0 1 0 1 0 3 0 1 1 0 0 0 11 0 1347.5619 Q04637 Q04637 1557 1567 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0011186 119.22 By MS/MS 2 0 1 1 271200 271200 0 3084 1291 3194 7224 5988 5988 1 91731 0 EDAFYSWESSKDPAEQQGK LRMFFDALYDEDVVKEDAFYSWESSKDPAE YSWESSKDPAEQQGKGVALKSVTAFFKWLR K E D G K G 2 0 0 2 0 2 3 1 0 0 0 2 0 1 1 3 0 1 1 0 0 0 19 1 2200.9549 Q04637 Q04637 1557 1575 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.0013772 99.915 By MS/MS 2 0 1 1 241010 241010 0 3085 1291 3195 7225 5989 5989 1 81521 0 EDAGAEKIFR EKKQKASQNLVVLAREDAGAEKIFRSNGVQ VVLAREDAGAEKIFRSNGVQLLQRLLDMGE R E D F R S 2 1 0 1 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1134.5669 Q9H3U1 Q9H3U1 184 193 UNC45A Protein unc-45 homolog A yes yes 2 0.041271 72.607 By MS/MS 4 0 1 1 1147300 1147300 0 3086 2442 3196 7226 5990 5990 1 107960 0 EDAGGMIQR ESVASCLPPLVPAIKEDAGGMIQRLMQQLL LVPAIKEDAGGMIQRLMQQLLESDKYAERK K E D Q R L 1 1 0 1 0 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 9 0 975.44438 Q92616 Q92616 1372 1380 GCN1L1 Translational activator GCN1 yes yes 2 0.00014126 157.58 By MS/MS 2 0 2 2 899740 899740 0 3087 2064 3197;3198 7227;7228 5991;5992;5993 5992 996 3 304330 0 EDAPIGPHLQSMPSEQIR SRTLSFGSDLNYATREDAPIGPHLQSMPSE PIGPHLQSMPSEQIRNQLTAMSSVLAKALE R E D I R N 1 1 0 1 0 2 2 1 1 2 1 0 1 0 3 2 0 0 0 0 0 0 18 0 2003.9735 Q14152 Q14152 503 520 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.00021741 130.72 By MS/MS 3 1.41 1 1 1 1 1 5 6136500 6136500 0 3088 1422 3199 7229;7230;7231;7232;7233 5994;5995;5996;5997;5998 5996 5 376560 0 EDAVSFAEK TADPLSNMVLTFSTKEDAVSFAEKNGWSYD LTFSTKEDAVSFAEKNGWSYDIEERKVPKP K E D E K N 2 0 0 1 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 994.46074 O43181 O43181 132 140 NDUFS4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes yes 2 0.010746 99.136 By MS/MS 9 0 1 1 397020 397020 0 3089 196 3200 7234 5999 5999 1 7813.5 0 EDAVSKEVTR KNVKFVLKHKVAQKREDAVSKEVTRKLSEA VAQKREDAVSKEVTRKLSEADNRKMSRKEK R E D T R K 1 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 10 1 1132.5724 Q9UNL2 Q9UNL2 93 102 SSR3 Translocon-associated protein subunit gamma yes yes 2 6.4976E-07 188.91 By MS/MS 9 0 1 1 1534200 1534200 0 3090 2790 3201 7235 6000 6000 1 30193 0 EDCLPYAATVLR GTLQALAQIFKHGKREDCLPYAATVLRCLD GKREDCLPYAATVLRCLDGCRLPESNQTLL R E D L R C 2 1 0 1 1 0 1 0 0 0 2 0 0 0 1 0 1 0 1 1 0 0 12 0 1406.6864 Q9BTW9 Q9BTW9 267 278 TBCD Tubulin-specific chaperone D yes yes 2 0.00035335 140.49 By MS/MS 3 0 1 1 209170 209170 0 3091 2319 3202 7236 6001 6001 1 3827.1 0 EDDFNNRLNNR FRRWLGLPAGVLITREDDFNNRLNNRASFK LITREDDFNNRLNNRASFKGCTALHYAVLA R E D N R A 0 2 4 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 11 1 1405.6335 Q9H078 Q9H078 251 261 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.0024802 115.49 By MS/MS 6 0 1 1 2319700 2319700 0 3092 2402 3203 7237 6002 6002 1 15946 0 EDDVGTGAGLLEIK RACGARIVSRPEELREDDVGTGAGLLEIKK REDDVGTGAGLLEIKKIGDEYFTFITDCKD R E D I K K 1 0 0 2 0 0 2 3 0 1 2 1 0 0 0 0 1 0 0 1 0 0 14 0 1415.7144 P49368 P49368 340 353 CCT3 T-complex protein 1 subunit gamma yes yes 2 1.7941E-11 242.45 By MS/MS By matching 6 0.707 1 2 1 3 1 11311000 11270000 40600 3093 947 3204 7238;7239;7240;7241 6003;6004;6005 6004 3 98777 41604 EDDVRQYVVR PKRASRIRKLFNLSKEDDVRQYVVRKPLNK FNLSKEDDVRQYVVRKPLNKEGKKPRTKAP K E D V R K 0 2 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 10 1 1277.6364 P62753 P62753 150 159 RPS6 40S ribosomal protein S6 yes yes 2 0.039978 98.629 By MS/MS 8 0 1 1 3506200 3506200 0 3094 1169 3205 7242 6006 6006 1 44265 0 EDEEESLNEVGYDDIGGCR APDTVIHCEGEPIKREDEEESLNEVGYDDI ESLNEVGYDDIGGCRKQLAQIKEMVELPLR R E D C R K 0 1 1 3 1 0 5 3 0 1 1 0 0 0 0 1 0 0 1 1 0 0 19 0 2184.8753 P55072 P55072 192 210 VCP Transitional endoplasmic reticulum ATPase yes yes 2 9.2993E-72 361.61 By MS/MS 4.5 0.5 1 1 2 3975700 3975700 0 3095 1054 3206 7243;7244 6007 6007 1 298900 0 EDEEESLNEVGYDDIGGCRK APDTVIHCEGEPIKREDEEESLNEVGYDDI SLNEVGYDDIGGCRKQLAQIKEMVELPLRH R E D R K Q 0 1 1 3 1 0 5 3 0 1 1 1 0 0 0 1 0 0 1 1 0 0 20 1 2312.9703 P55072 P55072 192 211 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.00076357 99.747 By MS/MS 4.5 0.5 1 1 2 3553200 3553200 0 3096 1054 3207 7245;7246 6008 6008 1 256350 0 EDFDSLLQSAK AQTDLLQIDPNFGSKEDFDSLLQSAKKKSI FGSKEDFDSLLQSAKKKSIRVILDLTPNYR K E D A K K 1 0 0 2 0 1 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 11 0 1251.5983 P08195 P08195 288 298 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 3.9376E-14 246.86 By MS/MS 4.5 0.5 1 1 2 4447700 4447700 0 3097 519 3208 7247;7248 6009;6010 6010 2 162390 0 EDFLNICIEPDTISK LSITTRNNQLDPTSKEDFLNICIEPDTISK EDFLNICIEPDTISKGDFITIGSRKVRNPK K E D S K G 0 0 1 2 1 0 2 0 0 3 1 1 0 1 1 1 1 0 0 0 0 0 15 0 1792.8553 Q53H12 Q53H12 328 342 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.033077 107.85 By MS/MS 7 0 1 1 0 0 0 3098 1589 3209 7249 6011 6011 1 0 0 EDGAISTIVLR SEVGDTQVVVFKHEKEDGAISTIVLRGSTD KHEKEDGAISTIVLRGSTDNLMDDIERAVD K E D L R G 1 1 0 1 0 0 1 1 0 2 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1172.6401 P50990 P50990 368 378 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00036499 134.25 By MS/MS By MS/MS 6 2.39 1 1 2 1 1 1 6 1 19887000 19753000 134000 3099 984 3210 7250;7251;7252;7253;7254;7255;7256 6012;6013;6014;6015;6016;6017;6018 6018 7 156800 137310 EDGGYTFTATPEDFPK LANGDTLRVFKMTKREDGGYTFTATPEDFP DGGYTFTATPEDFPKKHKAPVIDIGIANTG R E D P K K 1 0 0 2 0 0 2 2 0 0 0 1 0 2 2 0 3 0 1 0 0 0 16 0 1773.7734 Q9Y4P3 Q9Y4P3 170 185 TBL2 Transducin beta-like protein 2 yes yes 2 0.00016741 138.42 By MS/MS 7 0 1 1 0 0 0 3100 2899 3211 7257 6019 6019 1 0 0 EDGLAQQQTQLNLR SKADEASELACPTPKEDGLAQQQTQLNLRS KEDGLAQQQTQLNLRSLLVNPEGPTLMRLN K E D L R S 1 1 1 1 0 4 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 14 0 1612.8169 P49327 P49327 2207 2220 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.6938E-43 322.07 By MS/MS By MS/MS 2.9 1.3 2 2 2 3 1 6 4 38831000 38239000 592370 3101 946 3212 7258;7259;7260;7261;7262;7263;7264;7265;7266;7267 6020;6021;6022;6023;6024;6025;6026;6027;6028;6029 6027 10 6928600 594130 EDGMVPFVFVGTK VRVRIEGDNENKLPREDGMVPFVFVGTKES PREDGMVPFVFVGTKESIGNVQVLLEYHIA R E D T K E 0 0 0 1 0 0 1 2 0 0 0 1 1 2 1 0 1 0 0 3 0 0 13 0 1424.701 P51114 P51114 329 341 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 2 0.0088911 113.69 By MS/MS 5 0 1 1 133110 133110 0 3102 987 3213 7268 6030 6030 1 1335 0 EDGNEEDKENQGDETQGQQPPQRR RPRFRRGPPRQRQPREDGNEEDKENQGDET NQGDETQGQQPPQRRYRRNFNYRRRRPENP R E D R R Y 0 2 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 24 2 2783.1979 P67809 P67809 257 280 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 4 0.042533 42.529 By MS/MS 6.5 0.5 1 1 2 989140 989140 0 3103 1206 3214 7269;7270 6031 6031 1 9509.2 0 EDGQEYAQVIK GKNENESEKRELVFKEDGQEYAQVIKMLGN LVFKEDGQEYAQVIKMLGNGRLEAMCFDGV K E D I K M 1 0 0 1 0 2 2 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 11 0 1278.6092 P47813;O14602 P47813 30 40 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 3.0953E-20 270.54 By MS/MS 9.5 0.5 1 1 2 13361000 13361000 0 3104 927 3215 7271;7272 6032 6032 1 270580 0 EDGSEVGVGGAQVTGSNTR GSADLNATFYGPVKKEDGSEVGVGGAQVTG EVGVGGAQVTGSNTRKHILQVSTFQMTILM K E D T R K 1 1 1 1 0 1 2 5 0 0 0 0 0 0 0 2 2 0 0 3 0 0 19 0 1818.8344 Q13618 Q13618 570 588 CUL3 Cullin-3 yes yes 2 5.4461E-35 314.55 By MS/MS 4.5 0.5 1 1 2 1657100 1657100 0 3105 1404 3216 7273;7274 6033 6033 1 81729 0 EDIEFICK FLNKMKIMVIKDIEREDIEFICKTIGTKPV VIKDIEREDIEFICKTIGTKPVAHIDQFTA R E D C K T 0 0 0 1 1 0 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1052.4848 P50991 P50991 331 338 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0024534 138.83 By MS/MS By matching 6.75 0.829 2 1 1 3 1 12922000 12848000 73445 3106 985 3217 7275;7276;7277;7278 6034;6035 6034 2 103130 75260 EDIQSVMTEIR YRGALWILGEYCSTKEDIQSVMTEIRRSLG CSTKEDIQSVMTEIRRSLGEIPIVESEIKK K E D I R R 0 1 0 1 0 1 2 0 0 2 0 0 1 0 0 1 1 0 0 1 0 0 11 0 1319.6391 P53618 P53618 470 480 COPB1 Coatomer subunit beta yes yes 2 3.6365E-08 202.96 By MS/MS 4.5 0.5 1 1 2 3555700 3555700 0 3107 1033 3218 7279;7280 6036;6037 6037 2 265380 0 EDITQEFPGK YDMEIIEEEAFLAWKEDITQEFPGKGKALF FLAWKEDITQEFPGKGKALFQVNQWLTWLE K E D G K G 0 0 0 1 0 1 2 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 10 0 1162.5506 P78344 P78344 871 880 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 1.5423E-07 186.41 By MS/MS 6.5 2.5 1 1 2 3604800 3604800 0 3108 1219 3219 7281;7282 6038;6039 6038 2 321120 0 EDIYSGGGGGGSR PIQGHRVEVKKAVPKEDIYSGGGGGGSRSS PKEDIYSGGGGGGSRSSRGGRGGRGRGGGR K E D S R S 0 1 0 1 0 0 1 6 0 1 0 0 0 0 0 2 0 0 1 0 0 0 13 0 1210.5214 Q13151 Q13151 177 189 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 2 0.030412 79.036 By MS/MS 7.5 0.5 1 1 2 815530 815530 0 3109 1359 3220 7283;7284 6040 6040 1 11531 0 EDLDKVEPAVIEAQNAVK HKQQEVIADKQMSVKEDLDKVEPAVIEAQN DKVEPAVIEAQNAVKSIKKQHLVEVRSMAN K E D V K S 3 0 1 2 0 1 3 0 0 1 1 2 0 0 1 0 0 0 0 3 0 0 18 1 1967.0211 Q14204 Q14204 3280 3297 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.00020938 127.66 By MS/MS 1 0 1 1 169030 169030 0 3110 1433 3221 7285 6041;6042 6042 2 40731 0 EDLILSLR IDFTPPPNDPHGIQREDLILSLRAVLASTP DPHGIQREDLILSLRAVLASTPRFAEFLLP R E D L R A 0 1 0 1 0 0 1 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 8 0 957.5495 Q96T76 Q96T76 239 246 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.00070398 155.75 By MS/MS 4.5 0.5 1 1 2 1210100 1210100 0 3111 2240 3222 7286;7287 6043 6043 1 100560 0 EDLNCQEEEDPMNK TTVSDDVSMTFITSKEDLNCQEEEDPMNKL KEDLNCQEEEDPMNKLKGQKIVSCRICKGD K E D N K L 0 0 2 2 1 1 4 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 14 0 1749.6822 O75821 O75821 135 148 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 2.609E-56 355.39 By MS/MS 7 0 2 2 2981000 2981000 0 3112 348 3223;3224 7288;7289 6044;6045 6045 144 2 46796 0 EDLNCQEEEDPMNKLK TTVSDDVSMTFITSKEDLNCQEEEDPMNKL DLNCQEEEDPMNKLKGQKIVSCRICKGDHW K E D L K G 0 0 2 2 1 1 4 0 0 0 2 2 1 0 1 0 0 0 0 0 0 0 16 1 1990.8612 O75821 O75821 135 150 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.053746 59.225 By MS/MS 7 0 1 1 2464800 2464800 0 3113 348 3225 7290 6046 6046 1 38693 0 EDLPGFVFESNR IAIHNSDGQQATILKEDLPGFVFESNRGTK ILKEDLPGFVFESNRGTKHSFTAETSLGSE K E D N R G 0 1 1 1 0 0 2 1 0 0 1 0 0 2 1 1 0 0 0 1 0 0 12 0 1408.6623 Q9ULT8 Q9ULT8 783 794 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00062507 130.01 By MS/MS 2 0.816 1 1 1 3 215890 215890 0 3114 2774 3226 7291;7292;7293 6047 6047 1 49369 0 EDLQLDKPASGVK IRFVIKKHELLNSTREDLQLDKPASGVKEE TREDLQLDKPASGVKEEWYARITKLRKMVD R E D V K E 1 0 0 2 0 1 1 1 0 0 2 2 0 0 1 1 0 0 0 1 0 0 13 1 1398.7355 P78347 P78347 444 456 GTF2I General transcription factor II-I yes yes 2 0.00046271 174.23 By MS/MS 3 0 1 1 519840 519840 0 3115 1221 3227 7294 6048 6048 1 9511.6 0 EDLRLPEGDLGK QDGYLSLLQDSGEVREDLRLPEGDLGKEIE EVREDLRLPEGDLGKEIEQKYDCGEEILIT R E D G K E 0 1 0 2 0 0 2 2 0 0 3 1 0 0 1 0 0 0 0 0 0 0 12 1 1340.6936 P63241 P63241 110 121 EIF5A Eukaryotic translation initiation factor 5A-1 yes yes 2;3 0.0053516 123.62 By MS/MS 9.5 0.5 2 2 4 18874000 18874000 0 3116 1201 3228 7295;7296;7297;7298 6049;6050;6051;6052 6049 4 900970 0 EDLRLPEGDLGKEIEQK QDGYLSLLQDSGEVREDLRLPEGDLGKEIE LRLPEGDLGKEIEQKYDCGEEILITVLSAM R E D Q K Y 0 1 0 2 0 1 4 2 0 1 3 2 0 0 1 0 0 0 0 0 0 0 17 2 1968.0164 P63241 P63241 110 126 EIF5A Eukaryotic translation initiation factor 5A-1 yes yes 3 0.00060531 122.75 By MS/MS 9.5 0.5 1 1 2 2936700 2936700 0 3117 1201 3229 7299;7300 6053 6053 1 143100 0 EDLYLKPIQR LKVRIMGPNYTPGKKEDLYLKPIQRTILMM TPGKKEDLYLKPIQRTILMMGRYVEPIEDV K E D Q R T 0 1 0 1 0 1 1 0 0 1 2 1 0 0 1 0 0 0 1 0 0 0 10 1 1273.703 P13639 P13639 440 449 EEF2 Elongation factor 2 yes yes 2 0.0013963 141.52 By MS/MS 4 2 1 1 1 1 1 1 1 7 36526000 36526000 0 3118 602 3230 7301;7302;7303;7304;7305;7306;7307 6054;6055;6056 6054 3 2210300 0 EDMAALEK YVGEGMEEGEFSEAREDMAALEKDYEEVGA GEFSEAREDMAALEKDYEEVGADSADGEDE R E D E K D 2 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 905.41643 P68363;P68366;Q71U36;Q9BQE3 Q9BQE3 423 430 TUBA1B;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 0.014237 106.04 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 6623000 6499000 123990 3119 1210;1751;2290;1211 3231 7308;7309;7310;7311;7312;7313 6057;6058 6057 2 85595 127060 EDNGIGILTLNNPSR KTLQQFPGGSIDLQKEDNGIGILTLNNPSR EDNGIGILTLNNPSRMNAFSGVMMLQLLEK K E D S R M 0 1 3 1 0 0 1 2 0 2 2 0 0 0 1 1 1 0 0 0 0 0 15 0 1611.8216 Q9NTX5 Q9NTX5 60 74 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 4.8098E-11 236.42 By MS/MS 8 0 1 1 552850 552850 0 3120 2578 3232 7314 6059 6059 1 6979.7 0 EDPTAVACTFSCMMK YNQPGTCYTLVALPKEDPTAVACTFSCMMK EDPTAVACTFSCMMKFTVKDCDPTTGETDD K E D M K F 2 0 0 1 2 0 1 0 0 0 0 1 2 1 1 1 2 0 0 1 0 0 15 0 1746.7085 Q9Y678 Q9Y678 715 729 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0005443 152.38 By MS/MS 4 0 1 1 356280 356280 0 3121 2933 3233 7315 6060 6060 1 33529 0 EDPVLLQGIR VIVLLLEGSLVWAPREDPVLLQGIRVSIAQ VWAPREDPVLLQGIRVSIAQWPALTFTPLV R E D I R V 0 1 0 1 0 1 1 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1138.6346 Q7LBC6 Q7LBC6 102 111 KDM3B Lysine-specific demethylase 3B yes yes 2 2.4524E-05 164.96 By MS/MS 2.5 0.5 1 1 2 282150 282150 0 3122 1773 3234 7316;7317 6061 6061 1 66629 0 EDQSILCTGESGAGK YAITDTAYRSMMQDREDQSILCTGESGAGK EDQSILCTGESGAGKTENTKKVIQYLAYVA R E D G K T 1 0 0 1 1 1 2 3 0 1 1 1 0 0 0 2 1 0 0 0 0 0 15 0 1550.6883 P35580;P35579;Q7Z406 P35579 166 180 MYH10;MYH9;MYH14 Myosin-10;Myosin-9;Myosin-14 no no 2 3.9825E-07 212.1 By MS/MS 2 0 1 1 590810 590810 0 3123 824;825;1788 3235 7318 6062 6062 1 199840 0 EDQTEYLEER GEPIGRGTKVILHLKEDQTEYLEERRVKEV ILHLKEDQTEYLEERRVKEVVKKHSQFIGY K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P07900;Q58FF6;P08238;Q58FF7 P08238 187 196 HSP90AA1;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 1.6408E-07 185.33 By MS/MS 4 0 1 1 1350700 1350700 0 3124 521;513 3236 7319 6063 6063 1 127110 0 EDQTEYLEERR GEPIGRGTKVILHLKEDQTEYLEERRVKEV LHLKEDQTEYLEERRVKEVVKKHSQFIGYP K E D R R V 0 2 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 11 1 1466.6638 P07900;P08238;Q58FF7 P08238 187 197 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 0.0036412 120.31 By MS/MS 4 0 1 1 624930 624930 0 3125 521;513 3237 7320 6064 6064 1 58810 0 EDSARPGAHAK AVDGNTVELKRAVSREDSARPGAHAKVKKL AVSREDSARPGAHAKVKKLFVGGLKGDVAE R E D A K V 3 1 0 1 0 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 11 1 1137.5527 Q13151 Q13151 86 96 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 2 0.0024834 131.5 By MS/MS 7.5 0.5 1 1 2 417930 417930 0 3126 1359 3238 7321;7322 6065;6066 6065 2 6021.4 0 EDSGLFSPIR LCDAPDSPRPVKASREDSGLFSPIRSSAFS VKASREDSGLFSPIRSSAFSPLGGCTPAEC R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.00020511 146.79 By MS/MS 2.5 0.5 1 1 2 502750 502750 0 3127 2758 3239 7323;7324 6067;6068 6068 2 129790 0 EDSLDSVLFLK QICEDHIKAQIHQFREDSLDSVLFLKKIDR HQFREDSLDSVLFLKKIDRCWQNHCRQMIM R E D L K K 0 0 0 2 0 0 1 0 0 0 3 1 0 1 0 2 0 0 0 1 0 0 11 0 1264.6551 Q13620;Q13619 Q13620 277 287 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.0091824 112.11 By MS/MS 4.5 0.5 1 1 2 522730 522730 0 3128 1405 3240 7325;7326 6069 6069 1 42816 0 EDSQRPGAHLTVKK KVDGRVVEPKRAVSREDSQRPGAHLTVKKI REDSQRPGAHLTVKKIFVGGIKEDTEEHHL R E D K K I 1 1 0 1 0 1 1 1 1 0 1 2 0 0 1 1 1 0 0 1 0 0 14 2 1564.8322 P09651;Q32P51 P09651 93 106 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3 0.0064348 96.82 By MS/MS 7.5 0.5 1 1 2 1515800 1515800 0 3129 540 3241 7327;7328 6070 6070 1 21761 0 EDTNNLFSVQFR LTHDDTGARYLHLAREDTNNLFSVQFRTTP LAREDTNNLFSVQFRTTPMDSTGVPHILEH R E D F R T 0 1 2 1 0 1 1 0 0 0 1 0 0 2 0 1 1 0 0 1 0 0 12 0 1468.6947 Q5JRX3 Q5JRX3 82 93 PITRM1 Presequence protease, mitochondrial yes yes 2 1.1113E-08 237.84 By MS/MS 4 0 1 1 762020 762020 0 3130 1607 3242 7329 6071 6071 1 71712 0 EDVLTLLLPVMGDSK GSIFGLGLAYAGSNREDVLTLLLPVMGDSK EDVLTLLLPVMGDSKSSMEVAGVTALACGM R E D S K S 0 0 0 2 0 0 1 1 0 0 4 1 1 0 1 1 1 0 0 2 0 0 15 0 1628.8695 Q13200 Q13200 495 509 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00057177 131.17 By MS/MS 4 0 1 1 87719 87719 0 3131 1365 3243 7330 6072;6073 6072 790 2 8255 0 EDYLYAVR YITAFFFAGYYLVKREDYLYAVRDREMFGY GYYLVKREDYLYAVRDREMFGYMKLHPEDF R E D V R D 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 1027.4975 O95298;E9PQ53 O95298 78 85 NDUFC2;NDUFC2-KCTD14 NADH dehydrogenase [ubiquinone] 1 subunit C2;NADH dehydrogenase [ubiquinone] 1 subunit C2, isoform 2 yes no 2 0.0018326 144.83 By MS/MS 10 0 1 1 993160 993160 0 3132 403 3244 7331 6074 6074 1 53528 0 EEAAAVPAAAPDDLALLK CAGARKKRRSPPRKREEAAAVPAAAPDDLA AAVPAAAPDDLALLKNLRSEEQKKKNRKKL R E E L K N 7 0 0 2 0 0 2 0 0 0 3 1 0 0 2 0 0 0 0 1 0 0 18 0 1763.9305 Q86UE4 Q86UE4 90 107 MTDH Protein LYRIC yes yes 2 0.0036067 99.531 By MS/MS 5 0 1 1 2095100 2095100 0 3133 1819 3245 7332 6075 6075 1 21013 0 EEACDCLFEVVNK FINMLLGHMSIEVLREEACDCLFEVVNKGM LREEACDCLFEVVNKGMDPVDKMKLVESLC R E E N K G 1 0 1 1 2 0 3 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 13 0 1611.6909 O43592 O43592 241 253 XPOT Exportin-T yes yes 2 2.8338E-13 248.09 By MS/MS 4 0 1 1 1841800 1841800 0 3134 220 3246 7333 6076 6076 1 173330 0 EEADLLLEQQR EKRLQDLENQYRKEKEEADLLLEQQRLYAD RKEKEEADLLLEQQRLYADSDSGDDSDKRS K E E Q R L 1 1 0 1 0 2 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1342.6729 O43896 O43896 659 669 KIF1C Kinesin-like protein KIF1C no no 2 0.0038782 106.88 By MS/MS 3 0 1 1 249520 249520 0 3135 244 3247 7334 6077 6077 1 4565.5 0 EEAEALYHSK AEVKAQYEEIAQRSKEEAEALYHSKYEELQ AQRSKEEAEALYHSKYEELQVTVGRHGDSL K E E S K Y 2 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1175.5459 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 365 374 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.741E-08 190.02 By MS/MS 4.2 1.83 1 1 2 1 2 2 1 10 1492800 0 1492800 + 3136 55 3248 7335;7336;7337;7338;7339;7340;7341;7342;7343;7344 6078;6079;6080;6081;6082 6078 5 0 600150 EEAQAEIEQYR SEARKRKNRRLKQAKEEAQAEIEQYRLQRE KQAKEEAQAEIEQYRLQREKEFKAKEAAAL K E E Y R L 2 1 0 0 0 2 4 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 11 0 1364.6208 O75348 O75348 38 48 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 2 1.8204E-25 280.09 By MS/MS 10 0 1 1 1142500 1142500 0 3137 313 3249 7345 6083 6083 1 61575 0 EEASDYLELDTIK GNTLGRGTTITLVLKEEASDYLELDTIKNL LKEEASDYLELDTIKNLVKKYSQFINFPIY K E E I K N 1 0 0 2 0 0 3 0 0 1 2 1 0 0 0 1 1 0 1 0 0 0 13 0 1524.7195 P14625 P14625 253 265 HSP90B1 Endoplasmin yes yes 2 0.0001124 172.21 By MS/MS 4 0 1 1 508300 508300 0 3138 615 3250 7346 6084 6084 1 47835 0 EEATVLQPPVSR LGDPQVASELLLKPREEATVLQPPVSRQRP KPREEATVLQPPVSRQRPRRTAQAKAGNLM R E E S R Q 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 1 0 0 2 0 0 12 0 1324.6987 O75127 O75127 349 360 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 6.133E-05 163.9 By MS/MS 5 0 1 1 2493900 2493900 0 3139 293 3251 7347 6085 6085 1 25012 0 EECDKYALQSQQR AMTAENLAVKHKISREECDKYALQSQQRWK SREECDKYALQSQQRWKAANDAGYFNDEMA R E E Q R W 1 1 0 1 1 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 13 1 1653.7417 P42765 P42765 177 189 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.00022634 146.36 By MS/MS 7 0 1 1 925470 925470 0 3140 887 3252 7348 6086 6086 1 14528 0 EECGPLPIVVASPR QQLADKKGLHVVEIREECGPLPIVVASPRG REECGPLPIVVASPRGPLRKDPEPEDEVPD R E E P R G 1 1 0 0 1 0 2 1 0 1 1 0 0 0 3 1 0 0 0 2 0 0 14 0 1522.7814 P82675 P82675 375 388 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.0004167 149.49 By MS/MS 7.5 0.5 1 1 2 3018600 3018600 0 3141 1233 3253 7349;7350 6087;6088 6087 2 46853 0 EECKSPKAECWSQK VKYQQRKHDPHRKFKEECKSPKAECWSQKM KEECKSPKAECWSQKMSNKQPNSGIENFLA K E E Q K M 1 0 0 0 2 1 3 0 0 0 0 3 0 0 1 2 0 1 0 0 0 0 14 2 1765.7764 Q8IZH2 Q8IZH2 1295 1308 XRN1 5-3 exoribonuclease 1 yes yes 2 0.041876 102.52 By MS/MS 7 0 1 1 1513500 1513500 0 3142 1893 3254 7351 6089 6089 1 23759 0 EEDGSLSLDGADSTGVVAK EEWSCSLCHVLPDLKEEDGSLSLDGADSTG SLSLDGADSTGVVAKLSPANQRKCERVLLA K E E A K L 2 0 0 3 0 0 2 3 0 0 2 1 0 0 0 3 1 0 0 2 0 0 19 0 1848.8589 Q13263 Q13263 677 695 TRIM28 Transcription intermediary factor 1-beta yes yes 2 1.2025E-24 274.39 By MS/MS By MS/MS 5.11 1.52 4 3 1 1 8 1 9959200 9840300 118960 3143 1367 3255 7352;7353;7354;7355;7356;7357;7358;7359;7360 6090;6091;6092;6093;6094 6091 4 762040 253470 EEEAIQLDGLNASQIR KSREGSRTDDEVVQREEEAIQLDGLNASQI EEAIQLDGLNASQIRELREKSEKFAFQAEV R E E I R E 2 1 1 1 0 2 3 1 0 2 2 0 0 0 0 1 0 0 0 0 0 0 16 0 1784.8905 P14625 P14625 52 67 HSP90B1 Endoplasmin yes yes 2 0.00044679 165.78 By MS/MS 4 0 1 1 958070 958070 0 3144 615 3256 7361 6095 6095 1 90161 0 EEEIAALVIDNGSGMCK ______________________________ EIAALVIDNGSGMCKAGFAGDDAPRAVFPS M E E C K A 2 0 1 1 1 0 3 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 17 0 1834.8441 P63261 P63261 2 18 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 2 3.5212E-57 338.47 By MS/MS 6.33 0.471 2 1 3 1799000 1799000 0 3145 1203 3257;3258 7362;7363;7364 6096;6097;6098 6098 701 3 26449 0 EEEIEFLYNENTVR NAYRFLIQNVLRLQKEEEIEFLYNENTVRE KEEEIEFLYNENTVRESPNITDRWILSFMQ K E E V R E 0 1 2 0 0 0 5 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 14 0 1783.8265 P41252 P41252 673 686 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.2731E-16 257.09 By MS/MS 3 0 1 1 109510 109510 0 3146 871 3259 7365 6099 6099 1 2003.7 0 EEEKLELQK RVFSLSSEFKNITVREEEKLELQKLLERVP KNITVREEEKLELQKLLERVPIPVKESIEE R E E Q K L 0 0 0 0 0 1 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 9 1 1144.5976 O75643 O75643 1031 1039 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.033853 105.52 By MS/MS 1.5 0.5 1 1 2 443670 443670 0 3147 340 3260 7366;7367 6100 6100 1 137820 0 EEELREYQER LKEREERERAERAKREEELREYQERVKKLE ERAKREEELREYQERVKKLEEVERKKRQRE R E E E R V 0 2 0 0 0 1 5 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 1 1379.6317 Q14152 Q14152 838 847 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 8.4885E-05 148.52 By MS/MS 3 0.816 1 1 1 3 2973000 2973000 0 3148 1422 3261 7368;7369;7370 6101 6101 1 130810 0 EEETSIDVAGKPNEVTK LAKEQKANEQKKESKEEETSIDVAGKPNEV ETSIDVAGKPNEVTKAAESPDQKDTDGGPK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 2;3 1.3392E-06 201.08 By MS/MS 2.29 1.03 2 2 2 1 7 4551000 4551000 0 3149 1038 3262 7371;7372;7373;7374;7375;7376;7377 6102;6103 6102 2 1084200 0 EEFEHQQK NEIINWLDKNQTAEKEEFEHQQKELEKVCN KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K E E Q K E 0 0 0 0 0 2 3 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1073.4778 P11142 P11142 590 597 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.05045 82.305 By MS/MS 5 0 1 1 363790 363790 0 3150 572 3263 7378 6104 6104 1 3648.6 0 EEFVLAAQK YSTLAGTRKDVEVTKEEFVLAAQKFGQVTP DVEVTKEEFVLAAQKFGQVTPMEVDILFQL K E E Q K F 2 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1033.5444 Q9UJS0 Q9UJS0 252 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00010134 161.9 By MS/MS 5 0 1 1 2123200 2123200 0 3151 2748 3264 7379 6105 6105 1 21294 0 EEGMVPFIFVGTR VRVRVEGDNDKKNPREEGMVPFIFVGTREN PREEGMVPFIFVGTRENISNAQALLEYHLS R E E T R E 0 1 0 0 0 0 2 2 0 1 0 0 1 2 1 0 1 0 0 2 0 0 13 0 1480.7384 P51116 P51116 339 351 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 0.0016474 113.44 By MS/MS 4 0 1 1 104150 104150 0 3152 988 3265 7380 6106 6106 547 1 9801.2 0 EEGVLTLWR RGYKNVFNALIRITREEGVLTLWRGCIPTM LIRITREEGVLTLWRGCIPTMARAVVVNAA R E E W R G 0 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 1 1 0 1 0 0 9 0 1101.5819 Q02978 Q02978 174 182 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 5.0348E-05 171.53 By MS/MS 8.5 0.5 1 1 2 4332000 4332000 0 3153 1284 3266 7381;7382 6107;6108 6108 2 55126 0 EEIAQLAR VVWLWLGTQSFVFQREEIAQLARQYAGLDH QSFVFQREEIAQLARQYAGLDHELAFSRLI R E E A R Q 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 928.49779 Q99720 Q99720 40 47 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 2 0.0073252 114.72 By MS/MS 8 0 1 1 4572600 4572600 0 3154 2262 3267 7383 6109 6109 1 57729 0 EEIDHAEYYLYK SSLTISRLIDNISSREEIDHAEYYLYKFRH SSREEIDHAEYYLYKFRHSPNCWYLRNWTI R E E Y K F 1 0 0 1 0 0 3 0 1 1 1 1 0 0 0 0 0 0 3 0 0 0 12 0 1571.7144 Q92552 Q92552 83 94 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 5.6695E-06 185.6 By MS/MS 7 0 1 1 2752500 2752500 0 3155 2054 3268 7384 6110 6110 1 43210 0 EEIFGPVMQILK PTVFGDVQDGMTIAKEEIFGPVMQILKFKT IAKEEIFGPVMQILKFKTIEEVVGRANNST K E E L K F 0 0 0 0 0 1 2 1 0 2 1 1 1 1 1 0 0 0 0 1 0 0 12 0 1402.753 P05091 P05091 415 426 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 2.9016E-05 174.02 By MS/MS 6 0 1 1 69529 69529 0 3156 485 3269 7385 6111 6111 1 477.96 0 EEIFGPVQPLFK PTVFGGVQDDMRIAKEEIFGPVQPLFKFKK IAKEEIFGPVQPLFKFKKIEEVVERANNTR K E E F K F 0 0 0 0 0 1 2 1 0 1 1 1 0 2 2 0 0 0 0 1 0 0 12 0 1402.7497 P30837 P30837 415 426 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 8.1519E-07 200.86 By MS/MS 6 0 1 1 1768100 1768100 0 3157 780 3270 7386 6112 6112 1 12154 0 EEIINYEFDTK RQYQLLFTQGSGENKEEIINYEFDTKDLVC GENKEEIINYEFDTKDLVCLGLSSIVGVWY K E E T K D 0 0 1 1 0 0 3 0 0 2 0 1 0 1 0 0 1 0 1 0 0 0 11 0 1399.6507 Q8TCT9 Q8TCT9 151 161 HM13 Minor histocompatibility antigen H13 yes yes 2 1.4952E-09 219.5 By MS/MS 2 0.816 1 1 1 3 451000 451000 0 3158 1993 3271 7387;7388;7389 6113 6113 1 108020 0 EEIIPVAAEYDK EQQKEFQATARKFAREEIIPVAAEYDKTGE FAREEIIPVAAEYDKTGEYPVPLIRRAWEL R E E D K T 2 0 0 1 0 0 3 0 0 2 0 1 0 0 1 0 0 0 1 1 0 0 12 0 1375.6871 P11310 P11310 58 69 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00095371 126.03 By MS/MS 7 0 1 1 2961600 2961600 0 3159 577 3272 7390 6114 6114 1 46491 0 EELEEVIK LATVQPGQNFHMFTKEELEEVIKDI_____ NFHMFTKEELEEVIKDI_____________ K E E I K D 0 0 0 0 0 0 4 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 987.51244 P28066 P28066 232 239 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0008839 154.01 By MS/MS By matching 8 0 2 1 1 1622300 1571300 51003 3160 748 3273 7391;7392 6115 6115 1 19838 68826 EELEEVIKDI LATVQPGQNFHMFTKEELEEVIKDI_____ HMFTKEELEEVIKDI_______________ K E E D I - 0 0 0 1 0 0 4 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1215.6234 P28066 P28066 232 241 PSMA5 Proteasome subunit alpha type-5 yes yes 2 1.5672E-07 199.89 By MS/MS 8 0 1 1 536450 536450 0 3161 748 3274 7393 6116 6116 1 6772.6 0 EELEQREAELQK ERKERLESLNIQREKEELEQREAELQKVRK REKEELEQREAELQKVRKAEEERLRQEAKE K E E Q K V 1 1 0 0 0 2 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1500.742 Q14152 Q14152 592 603 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 7.5568E-12 228.84 By MS/MS 3 0 3 3 873190 873190 0 3162 1422 3275 7394;7395;7396 6117;6118;6119 6118 3 15977 0 EELGFRPEYSASQLK MIDRWYHPGCFVKNREELGFRPEYSASQLK EELGFRPEYSASQLKGFSLLATEDKEALKK R E E L K G 1 1 0 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 15 1 1752.8683 P09874 P09874 168 182 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 1.8858E-10 225.55 By MS/MS 3.67 0.471 1 2 3 8204400 8204400 0 3163 543 3276 7397;7398;7399 6120;6121 6120 2 758230 0 EELGLIEQAYDNPHEALSR KEAYSVKSRLNQSQREELGLIEQAYDNPHE LIEQAYDNPHEALSRIKRHLLTQRAFKEVG R E E S R I 2 1 1 1 0 1 4 1 1 1 3 0 0 0 1 1 0 0 1 0 0 0 19 0 2183.0495 Q6P2Q9 Q6P2Q9 862 880 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.00025734 115.26 By MS/MS 2 0 1 1 333550 333550 0 3164 1708 3277 7400 6122 6122 1 112820 0 EELSMIQSPTLQK E E Q K 0 0 0 0 0 2 2 0 0 1 2 1 1 0 1 2 1 0 0 0 0 0 13 0 1502.765 REV__Q00059 yes yes 2 0.0017804 113.18 By MS/MS 8 0 2 2 606000 606000 0 + 3165 2963 3278 7401;7402 6123 6123 1 7650.7 0 EELSNVLAAMR IKKRVGTHIRAKRKREELSNVLAAMRKAAA KRKREELSNVLAAMRKAAAKKD________ R E E M R K 2 1 1 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 11 0 1231.6231 Q9Y3U8 Q9Y3U8 88 98 RPL36 60S ribosomal protein L36 yes yes 2 2.9548E-09 213.31 By MS/MS 10 0 2 2 919210 919210 0 3166 2885 3279;3280 7403;7404 6124;6125 6125 1193 2 49542 0 EELTLEGIR TKKFMRDPIRILVKKEELTLEGIRQFYINV RILVKKEELTLEGIRQFYINVEREEWKLDT K E E I R Q 0 1 0 0 0 0 3 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1058.5608 P60842 P60842 239 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 2.525E-08 184.38 By MS/MS 6 2.92 1 1 1 1 1 1 2 1 1 2 12 312750000 312750000 0 3167 1097 3281 7405;7406;7407;7408;7409;7410;7411;7412;7413;7414;7415;7416 6126;6127;6128;6129;6130;6131;6132;6133;6134;6135 6132 10 4214600 0 EELVAEQALK LLWTCIMNAVEWNKKEELVAEQALKHLKQY EWNKKEELVAEQALKHLKQYAPLLAVFSSQ K E E L K H 2 0 0 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1128.6027 Q9Y6E2 Q9Y6E2 311 320 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.0014511 114.89 By MS/MS 7 0 1 1 2304700 2304700 0 3168 2942 3282 7417 6136 6136 1 36180 0 EENAEQQALAAK NKKDELQSERNYLWREENAEQQALAAKRED LWREENAEQQALAAKREDLEKKQQLLRAAT R E E A K R 4 0 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 0 1300.6259 Q9UQE7 Q9UQE7 475 486 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 7.9995E-25 275.13 By MS/MS 2.5 0.5 1 1 2 389040 389040 0 3169 2807 3283 7418;7419 6137 6137 1 30997 0 EEPDPLQDK VFSSSATAQGTPEKKEEPDPLQDKSISLYQ GTPEKKEEPDPLQDKSISLYQRFKKTFRQY K E E D K S 0 0 0 2 0 1 2 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 9 0 1069.4928 Q96ND0 Q96ND0 110 118 FAM210A Protein FAM210A yes yes 2 0.021746 88.177 By MS/MS 9 0 1 1 614340 614340 0 3170 2203 3284 7420 6138 6138 1 12090 0 EEPEPLSPELEYIPR NRTRALQSHSSPEGKEEPEPLSPELEYIPR EEPEPLSPELEYIPRKRGKNPMKAVGLAWY K E E P R K 0 1 0 0 0 0 5 0 0 1 2 0 0 0 4 1 0 0 1 0 0 0 15 0 1796.8832 Q8N490 Q8N490 51 65 PNKD Probable hydrolase PNKD yes yes 2 0.00045212 155.48 By MS/MS 9.5 0.5 1 1 2 920540 920540 0 3171 1915 3285 7421;7422 6139;6140;6141;6142 6140 4 27105 0 EEPGSDSGTTAVVALIR EEEEEEMMVPGMEGKEEPGSDSGTTAVVAL PGSDSGTTAVVALIRGKQLIVANAGDSRCV K E E I R G 2 1 0 1 0 0 2 2 0 1 1 0 0 0 1 2 2 0 0 2 0 0 17 0 1700.8581 O15355 O15355 321 337 PPM1G Protein phosphatase 1G yes yes 2 0.00060668 154.67 By MS/MS 5 0 1 1 752410 752410 0 3172 184 3286 7423 6143 6143 1 7546.3 0 EEQAQREHEEYLK RLEEEQKEEEERKAREEQAQREHEEYLKLK AREEQAQREHEEYLKLKEAFVVEEEGVGET R E E L K L 1 1 0 0 0 2 5 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 13 1 1687.7802 Q96HY6 Q96HY6 179 191 DDRGK1 DDRGK domain-containing protein 1 yes yes 3 0.024651 74.237 By MS/MS 7 0 1 1 2773800 2773800 0 3173 2169 3287 7424 6144 6144 1 43543 0 EEQFNSTFR YVDGVEVHNAKTKPREEQFNSTFRVVSVLT AKTKPREEQFNSTFRVVSVLTVVHQDWLNG R E E F R V 0 1 1 0 0 1 2 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 9 0 1156.5149 P01859 P01859 172 180 IGHG2 Ig gamma-2 chain C region yes yes 2 0.0050657 109.11 By MS/MS By MS/MS 6 0 2 1 1 7078300 6858500 219760 3174 454 3288 7425;7426 6145;6146 6146 2 47147 225190 EEQHQLAVTAYLK KALEVIKPAHILQEKEEQHQLAVTAYLKNS EKEEQHQLAVTAYLKNSRKEHQRILARRQT K E E L K N 2 0 0 0 0 2 2 0 1 0 2 1 0 0 0 0 1 0 1 1 0 0 13 0 1528.7886 Q14152 Q14152 547 559 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 3.1061E-05 181.31 By MS/MS 3.5 0.5 1 1 2 693660 693660 0 3175 1422 3289 7427;7428 6147 6147 1 35702 0 EERLQKSR QSRGAPVSVYQLVVKEERLQKSRRAADIIE VYQLVVKEERLQKSRRAADIIECFSVPVSY K E E S R R 0 2 0 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 2 1044.5676 O14522 O14522 630 637 PTPRT Receptor-type tyrosine-protein phosphatase T yes yes 2 0.0027427 138.83 By matching By MS/MS 3.2 1.33 1 2 1 1 3 2 11105000 2662700 8442100 3176 123 3290 7429;7430;7431;7432;7433 6148 6148 1 131070 1093600 EESAASGGAAYTK KSPPSTGSTYGSSQKEESAASGGAAYTKRY QKEESAASGGAAYTKRYLEEQKTENGKDKE K E E T K R 4 0 0 0 0 0 2 2 0 0 0 1 0 0 0 2 1 0 1 0 0 0 13 0 1240.5572 Q9Y2W1 Q9Y2W1 334 346 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 8.1845E-05 175.49 By MS/MS 3 0 1 1 161500 161500 0 3177 2846 3291 7434 6149 6149 1 2955 0 EESFGPIMVISK PTVFTDVEDYMYLAKEESFGPIMVISKFQN LAKEESFGPIMVISKFQNGDIDGVLQRANS K E E S K F 0 0 0 0 0 0 2 1 0 2 0 1 1 1 1 2 0 0 0 1 0 0 12 0 1335.6744 Q3SY69 Q3SY69 824 835 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.00018878 151.22 By MS/MS 4 0 1 1 367500 367500 0 3178 1578 3292 7435 6150 6150 1 34584 0 EESGKPGAHVTVKK SIDGRVVEPKRAVAREESGKPGAHVTVKKL REESGKPGAHVTVKKLFVGGIKEDTEEHHL R E E K K L 1 0 0 0 0 0 2 2 1 0 0 3 0 0 1 1 1 0 0 2 0 0 14 2 1465.7889 P22626 P22626 100 113 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 3 0.028482 76.24 By MS/MS 7.5 0.5 1 1 2 621860 621860 0 3179 694 3293 7436;7437 6151 6151 1 9472.1 0 EESIHCK CVPRVVAEYLNGAVREESIHCKSVEEISTL EYLNGAVREESIHCKSVEEISTLVQKLADQ R E E C K S 0 0 0 0 1 0 2 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 901.39637 Q8N983 Q8N983 86 92 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.01405 124.89 By MS/MS 9.5 0.5 1 1 2 1253400 1253400 0 3180 1933 3294 7438;7439 6152;6153 6153 2 45347 0 EESTSSGNVSNR KKEPAITSQNSPEAREESTSSGNVSNRKDE EAREESTSSGNVSNRKDETNARDTYVSSFP R E E N R K 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 4 1 0 0 1 0 0 12 0 1265.5484 P23193 P23193 105 116 TCEA1 Transcription elongation factor A protein 1 yes yes 2 5.7558E-06 185.33 By MS/MS 7 0 1 1 551320 551320 0 3181 699 3295 7440 6154 6154 1 8654.7 0 EETQPPVALK RKNPLPPSVGVVDKKEETQPPVALKKEGIR VVDKKEETQPPVALKKEGIRRVGRRPDQQL K E E L K K 1 0 0 0 0 1 2 0 0 0 1 1 0 0 2 0 1 0 0 1 0 0 10 0 1110.5921 Q8NC51 Q8NC51 93 102 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00035984 136.27 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 2566700 2499500 67184 3182 1946 3296 7441;7442;7443 6155;6156 6156 2 17925 68845 EEVDLTGSVPVHAK KGQTFRLPSGQYLQREEVDLTGSVPVHAKT REEVDLTGSVPVHAKTKEKLEVTWEKMSKS R E E A K T 1 0 0 1 0 0 2 1 1 0 1 1 0 0 1 1 1 0 0 3 0 0 14 0 1479.7569 Q15031 Q15031 615 628 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0011412 135.8 By MS/MS 4 0 1 1 1304500 1304500 0 3183 1477 3297 7444 6157 6157 1 122770 0 EEVEDLCRLDK SIHGVKEAVQLVNTREEVEDLCRLDKMIDL VNTREEVEDLCRLDKMIDLIIPRGSSQLVR R E E D K M 0 1 0 2 1 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 1 1404.6555 P54886 P54886 540 550 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 2.2335E-12 231.38 By MS/MS 5 0 1 1 3208800 3208800 0 3184 1048 3298 7445 6158 6158 1 32182 0 EEVHGEAQR IPSRYLLLLAAGDPREEVHGEAQRVLRCLP AAGDPREEVHGEAQRVLRCLPGRNRKESTS R E E Q R V 1 1 0 0 0 1 3 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1053.4839 Q5VYK3 Q5VYK3 528 536 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00018086 156.51 By MS/MS 2 0 1 1 546110 546110 0 3185 1656 3299 7446 6159 6159 1 184720 0 EEVTELLAR ITEHELVPEHVVMTKEEVTELLARYKLREN HVVMTKEEVTELLARYKLRENQLPRIQAGD K E E A R Y 1 1 0 0 0 0 3 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1058.5608 P19388 P19388 154 162 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 0.00026972 153.78 By MS/MS 8 0 1 1 1976200 1976200 0 3186 661 3300 7447 6160 6160 1 24949 0 EEYPDRIMNTFSVVPSPK GTGSGMGTLLISKIREEYPDRIMNTFSVVP PDRIMNTFSVVPSPKVSDTVVEPYNATLSV R E E P K V 0 1 1 1 0 0 2 0 0 1 0 1 1 1 3 2 1 0 1 2 0 0 18 1 2108.0248 P68371;P07437;Q13509 P68371 157 174 TUBB4B;TUBB;TUBB3 Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain no no 2;3 0.00116 141.65 By MS/MS 6 0 2 2 3545700 3545700 0 3187 1212;509;1393 3301 7448;7449 6161;6162 6162 2 24374 0 EFADSLGIPFLETSAK CDLTTKKVVDYTTAKEFADSLGIPFLETSA FADSLGIPFLETSAKNATNVEQSFMTMAAE K E F A K N 2 0 0 1 0 0 2 1 0 1 2 1 0 2 1 2 1 0 0 0 0 0 16 0 1723.8669 P62820;Q9H0U4;Q92928 P62820 141 156 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 2 0.00017346 199.8 By MS/MS 8.5 0.5 1 1 2 333190 333190 0 3188 1171;2416 3302 7450;7451 6163;6164;6165 6164 3 5853.4 0 EFAGEDTSDLFLEER PAFKEHLRDFLVQIKEFAGEDTSDLFLEER EFAGEDTSDLFLEEREIALRQADEEKHKRQ K E F E R E 1 1 0 2 0 0 4 1 0 0 2 0 0 2 0 1 1 0 0 0 0 0 15 0 1756.7792 O14980 O14980 1024 1038 XPO1 Exportin-1 yes yes 2 1.1447E-16 260.57 By MS/MS 4 0 1 1 3353800 3353800 0 3189 153 3303 7452 6166 6166 1 315620 0 EFDELNPSAQR FGQDEDVTSKAFTGREFDELNPSAQRDACL FTGREFDELNPSAQRDACLNARCFARVEPS R E F Q R D 1 1 1 1 0 1 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1304.5997 P16615 P16615 656 666 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 2.5414E-09 215.06 By MS/MS By MS/MS 3.17 1.34 1 1 1 2 1 5 1 14425000 14359000 66440 3190 635 3304 7453;7454;7455;7456;7457;7458 6167;6168;6169;6170;6171;6172 6170 6 2337600 141560 EFDRHSGSDR RGMGRGDGFDSRGKREFDRHSGSDRSSFSH SRGKREFDRHSGSDRSSFSHYSGLKHEDKR R E F D R S 0 2 0 2 0 0 1 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 10 1 1204.5221 Q8NC51 Q8NC51 192 201 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.012688 111.06 By MS/MS 6.5 0.5 1 1 2 2775300 2775300 0 3191 1946 3305 7459;7460 6173 6173 1 19729 0 EFDYLPPVDSR ELLSMHHQPDPALTKEFDYLPPVDSRSSSG ALTKEFDYLPPVDSRSSSGFVGLRNGGATC K E F S R S 0 1 0 2 0 0 1 0 0 0 1 0 0 1 2 1 0 0 1 1 0 0 11 0 1336.6299 Q9UPU5 Q9UPU5 1673 1683 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0020893 111.61 By MS/MS 1.5 0.5 1 1 2 345850 345850 0 3192 2802 3306 7461;7462 6174;6175 6175 2 109300 0 EFEEESKQPGVSEQQR DISSSLNSLADSNAREFEEESKQPGVSEQQ FEEESKQPGVSEQQRHQLKHRELFLSRQFE R E F Q R H 0 1 0 0 0 3 5 1 0 0 0 1 0 1 1 2 0 0 0 1 0 0 16 1 1905.8704 O94776 O94776 65 80 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.00021712 170.74 By MS/MS 5 0 1 1 2538200 2538200 0 3193 365 3307 7463 6176 6176 1 25457 0 EFEFSQLPLK DSSSTAPAQLGKKGKEFEFSQLPLKVEFLE GKKGKEFEFSQLPLKVEFLECSAKGGRGDV K E F L K V 0 0 0 0 0 1 2 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 10 0 1236.639 Q9Y5M8 Q9Y5M8 231 240 SRPRB Signal recognition particle receptor subunit beta yes yes 2 1.9842E-07 181.55 By MS/MS 8 0 1 1 360190 360190 0 3194 2917 3308 7464 6177 6177 1 4547.4 0 EFEKDKDDDEVFEK VTVNFRKLLLNRCQKEFEKDKDDDEVFEKK KEFEKDKDDDEVFEKKQKEMDEAATAEERG K E F E K K 0 0 0 4 0 0 4 0 0 0 0 3 0 2 0 0 0 0 0 1 0 0 14 2 1771.7788 Q04637 Q04637 850 863 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 5.5488E-23 286.19 By MS/MS 2 0 2 2 6614400 6614400 0 3195 1291 3309 7465;7466 6178;6179 6179 2 2237300 0 EFFNGKEPSR VGGSTRIPKIQQLVKEFFNGKEPSRGINPD QQLVKEFFNGKEPSRGINPDEAVAYGAAVQ K E F S R G 0 1 1 0 0 0 2 1 0 0 0 1 0 2 1 1 0 0 0 0 0 0 10 1 1209.5778 P11021 P11021 377 386 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00013688 162.88 By MS/MS 5 0 1 1 1200100 1200100 0 3196 571 3310 7467 6180 6180 1 12036 0 EFGFSGLNVK KNQSETLNWLSNAIKEFGFSGLNVKAFISN SNAIKEFGFSGLNVKAFISNVKTALAATNP K E F V K A 0 0 1 0 0 0 1 2 0 0 1 1 0 2 0 1 0 0 0 1 0 0 10 0 1096.5553 Q14008 Q14008 745 754 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0011422 120.87 By MS/MS 2 0 1 1 619630 619630 0 3197 1417 3311 7468 6181 6181 1 209590 0 EFGPVVIDYGK IRKARGTFDNAETKKEFGPVVIDYGKVQSK ETKKEFGPVVIDYGKVQSKVNLKYDSWHKE K E F G K V 0 0 0 1 0 0 1 2 0 1 0 1 0 1 1 0 0 0 1 2 0 0 11 0 1222.6234 Q14204 Q14204 1101 1111 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.048536 70.399 By MS/MS 2 0.816 1 1 1 3 1491600 1491600 0 3198 1433 3312 7469;7470;7471 6182 6182 1 400460 0 EFHGLGDCIIK RTRLAADVGKGAAQREFHGLGDCIIKIFKS AAQREFHGLGDCIIKIFKSDGLRGLYQGFN R E F I K I 0 0 0 1 1 0 1 2 1 2 1 1 0 1 0 0 0 0 0 0 0 0 11 0 1287.6282 P12235 P12235 153 163 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.00014728 148.52 By MS/MS 3.5 2.69 1 1 1 1 4 497010 497010 0 3199 588 3313 7472;7473;7474;7475 6183;6184 6183 2 124720 0 EFIQDFQK VCVRLLLESKEKKIREFIQDFQKLTAADDK SKEKKIREFIQDFQKLTAADDKTAQVEDFL R E F Q K L 0 0 0 1 0 2 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 8 0 1053.5131 Q14C86 Q14C86 1267 1274 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0048311 126.28 By MS/MS 2 0 1 1 296520 296520 0 3200 1466 3314 7476 6185 6185 1 100300 0 EFIQEPAK FDFLCMPVFHPRFKREFIQEPAKNRPGPQT FHPRFKREFIQEPAKNRPGPQTRSDLLLSG R E F A K N 1 0 0 0 0 1 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 8 0 960.49165 O14744 O14744 53 60 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.018484 101.33 By MS/MS 5 0 1 1 3252300 3252300 0 3201 137 3315 7477 6186 6186 1 32619 0 EFLHAQEEVKR VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI NLKKEFLHAQEEVKRIQSIPLVIGQFLEAV K E F K R I 1 1 0 0 0 1 3 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 11 1 1384.7099 P43686 P43686 71 81 PSMC4 26S protease regulatory subunit 6B yes yes 2;3 1.5764E-12 226.09 By MS/MS 6.33 0.471 2 1 3 7492100 7492100 0 3202 900 3316 7478;7479;7480 6187;6188;6189 6188 3 56719 0 EFLNELLK HGLDEAGIDGGGIFREFLNELLKSGFNPNQ DGGGIFREFLNELLKSGFNPNQGFFKTTNE R E F L K S 0 0 1 0 0 0 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 Q15386 Q15386 775 782 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.042434 85.359 By MS/MS 4 0 1 1 152830 152830 0 3203 1505 3317 7481 6190 6190 1 14383 0 EFLPEGQDIGAFVAEQK KKVGTLWREAGLSWKEFLPEGQDIGAFVAE LPEGQDIGAFVAEQKVEYTLGEESEAPGQR K E F Q K V 2 0 0 1 0 2 3 2 0 1 1 1 0 2 1 0 0 0 0 1 0 0 17 0 1876.9207 Q04637 Q04637 1405 1421 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 3.7052E-07 249.58 By MS/MS 2.83 1.34 1 2 1 1 1 6 2532400 2532400 0 3204 1291 3318 7482;7483;7484;7485;7486;7487 6191;6192;6193;6194 6191 4 761240 0 EFLVAGGEDFK EAPATINSASLHPEKEFLVAGGEDFKLYKY HPEKEFLVAGGEDFKLYKYDYNSGEELESY K E F F K L 1 0 0 1 0 0 2 2 0 0 1 1 0 2 0 0 0 0 0 1 0 0 11 0 1210.587 Q9Y3F4 Q9Y3F4 236 246 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.00054512 130.66 By MS/MS 7 0 1 1 2062300 2062300 0 3205 2877 3319 7488 6195 6195 1 32374 0 EFLVPSREPGK IETPTLFKRTPGGAKEFLVPSREPGKFYSL GGAKEFLVPSREPGKFYSLPQSPQQFKQLL K E F G K F 0 1 0 0 0 0 2 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 11 1 1257.6717 Q6PI48 Q6PI48 225 235 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00033775 131.52 By MS/MS 5 0 1 1 571970 571970 0 3206 1717 3320 7489 6196 6196 1 5736.6 0 EFNAEVHRK PHSTKRFPGYDSESKEFNAEVHRKHIMGQN YDSESKEFNAEVHRKHIMGQNVADYMRYLM K E F R K H 1 1 1 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 9 1 1128.5676 P46777 P46777 189 197 RPL5 60S ribosomal protein L5 yes yes 2 0.0069612 120.87 By MS/MS 7.5 0.5 1 1 2 993560 993560 0 3207 915 3321 7490;7491 6197 6197 1 13753 0 EFNLNELYQR GRAVSWTFSEENVIREFNLNELYQRAKKLS ENVIREFNLNELYQRAKKLSKAGDNIPEEQ R E F Q R A 0 1 2 0 0 1 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 10 0 1324.6412 Q9Y320 Q9Y320 254 263 TMX2 Thioredoxin-related transmembrane protein 2 yes yes 2 7.025E-15 238.51 By MS/MS 8 0 1 1 591260 591260 0 3208 2856 3322 7492 6198 6198 1 7464.6 0 EFPVISVVGYTNCGK LRKKRHLLRRQRTRREFPVISVVGYTNCGK EFPVISVVGYTNCGKTTLIKALTGDAAIQP R E F G K T 0 0 1 0 1 0 1 2 0 1 0 1 0 1 1 1 1 0 1 3 0 0 15 0 1668.8181 O43824 O43824 293 307 GTPBP6 Putative GTP-binding protein 6 yes yes 2 7.0723E-11 230.81 By MS/MS 6 0 1 1 1175500 1175500 0 3209 240 3323 7493 6199;6200 6199 2 8080.8 0 EFQAPIGSEEGLR ISNYYDNHLKQQLAKEFQAPIGSEEGLRLL AKEFQAPIGSEEGLRLLEDPERRQVRSGAR K E F L R L 1 1 0 0 0 1 3 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1431.6994 Q9NVH0 Q9NVH0 480 492 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 0.00034588 147.58 By MS/MS 5 0 1 1 2007400 2007400 0 3210 2594 3324 7494 6201 6201 1 20133 0 EFQITCGPDSFATDPSK PSTVVPAQTPWDKPREFQITCGPDSFATDP QITCGPDSFATDPSKQTTISVSFLLPDITD R E F S K Q 1 0 0 2 1 1 1 1 0 1 0 1 0 2 2 2 2 0 0 0 0 0 17 0 1898.8356 Q5JRX3 Q5JRX3 308 324 PITRM1 Presequence protease, mitochondrial yes yes 2 2.2537E-24 283.66 By MS/MS 4 0 1 1 1176500 1176500 0 3211 1607 3325 7495 6202 6202 1 110720 0 EFQSPGLR APEPPTFKKEPPKEKEFQSPGLRGVRTTTL KEPPKEKEFQSPGLRGVRTTTLFRAVNPEL K E F L R G 0 1 0 0 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 8 0 932.47158 Q96KF7 Q96KF7 19 26 SMIM8 Small integral membrane protein 8 yes yes 2 0.043599 84.916 By MS/MS 10 0 1 1 428330 428330 0 3212 2187 3326 7496 6203 6203 1 23085 0 EFRGLGDCLVK RTRLAADVGKAGAEREFRGLGDCLVKIYKS GAEREFRGLGDCLVKIYKSDGIKGLYQGFN R E F V K I 0 1 0 1 1 0 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 1 1292.6547 P05141;P12236 P05141 153 163 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 0.0011175 140.83 By MS/MS By matching 4.1 2.91 2 2 2 1 2 1 9 1 33352000 33325000 26948 3213 487;589 3327 7497;7498;7499;7500;7501;7502;7503;7504;7505;7506 6204;6205;6206;6207;6208 6204 5 1262100 36364 EFSEIQLAR KALYNRLVPLVNGVREFSEIQLARLKKLGI LVNGVREFSEIQLARLKKLGINKTDPSTLT R E F A R L 1 1 0 0 0 1 2 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1091.5611 Q6UB35 Q6UB35 531 539 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0016847 125.31 By MS/MS By matching 4 0.707 1 2 1 3 1 13006000 12796000 210320 3214 1728 3328 7507;7508;7509;7510 6209;6210;6211 6210 3 1189000 448120 EFSITEFSEGAK RTRIKAFLIWAYFDKEFSITEFSEGAKQAF FDKEFSITEFSEGAKQAFAHVSKLLSQCKF K E F A K Q 1 0 0 0 0 0 3 1 0 1 0 1 0 2 0 2 1 0 0 0 0 0 12 0 1343.6245 Q8WWC4 Q8WWC4 138 149 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 6.1398E-05 163.88 By MS/MS 9 0 1 1 455910 455910 0 3215 2034 3329 7511 6212 6212 1 8972.4 0 EFSPFGSITSAK IKNLDDTIDDEKLRKEFSPFGSITSAKVML LRKEFSPFGSITSAKVMLEDGRSKGFGFVC K E F A K V 1 0 0 0 0 0 1 1 0 1 0 1 0 2 1 3 1 0 0 0 0 0 12 0 1269.6241 Q13310 Q13310 313 324 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.0044059 130.98 By MS/MS 5 0 1 1 0 0 0 3216 1369 3330 7512 6213 6213 1 0 0 EFSPFGTITSAK VKNLDDGIDDERLRKEFSPFGTITSAKVMM LRKEFSPFGTITSAKVMMEGGRSKGFGFVC K E F A K V 1 0 0 0 0 0 1 1 0 1 0 1 0 2 1 2 2 0 0 0 0 0 12 0 1283.6398 P11940 P11940 313 324 PABPC1 Polyadenylate-binding protein 1 yes yes 2 6.8545E-06 181.87 By MS/MS 5.5 1.12 1 1 1 1 4 16262000 16262000 0 3217 586 3331 7513;7514;7515;7516 6214;6215 6214 2 180000 0 EFTAQNLGK LLIAGQINTYCQNIKEFTAQNLGKLFMAQA YCQNIKEFTAQNLGKLFMAQALQEYNN___ K E F G K L 1 0 1 0 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1006.5084 O15372 O15372 332 340 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 1;2 0.00047952 147.34 By MS/MS 4.25 2.77 1 1 2 4 46132000 46132000 0 3218 186 3332 7517;7518;7519;7520 6216;6217;6218 6217 3 792770 0 EFTEAVEAK LILDDVSLTHLTFGKEFTEAVEAKQVAQQE HLTFGKEFTEAVEAKQVAQQEAERARFVVE K E F A K Q 2 0 0 0 0 0 3 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1022.492 P35232 P35232 178 186 PHB Prohibitin yes yes 2 0.008708 115.49 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 8909200 8564900 344290 3219 814 3333 7521;7522;7523 6219;6220 6219 2 109500 464600 EFTLEFSR RANACNSVIKQLMKKEFTLEFSRDRKSMSV IKQLMKKEFTLEFSRDRKSMSVYCTPNKPS K E F S R D 0 1 0 0 0 0 2 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 8 0 1027.4975 P16615;O14983;Q93084 P16615 482 489 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 0.0023351 139.97 By MS/MS 2.5 1.12 1 1 1 1 4 7141300 7141300 0 3220 635 3334 7524;7525;7526;7527 6221;6222;6223 6221 3 1222500 0 EFTNVYIK KSRKEREAELGARAKEFTNVYIKNFGEDMD ELGARAKEFTNVYIKNFGEDMDDERLKDLF K E F I K N 0 0 1 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 1 0 0 8 0 1012.5229 P11940;Q13310 P11940 189 196 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2 0.025077 94.006 By MS/MS 5 0 1 1 4365000 4365000 0 3221 586;1369 3335 7528 6224 6224 1 43779 0 EFVAQNNTVQIK EKRKVAALEIEKLVREFVAQNNTVQIKHVI LVREFVAQNNTVQIKHVIQTLSQEFALSQH R E F I K H 1 0 2 0 0 2 1 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 12 0 1389.7252 Q08AM6 Q08AM6 39 50 VAC14 Protein VAC14 homolog yes yes 2 9.4967E-09 233.09 By MS/MS 4.5 0.5 1 1 2 3613000 3613000 0 3222 1316 3336 7529;7530 6225 6225 1 287310 0 EFVFENVK RMENDFLPSLELSRREFVFENVKFRQLQKE SLELSRREFVFENVKFRQLQKEKFQISNNG R E F V K F 0 0 1 0 0 0 2 0 0 0 0 1 0 2 0 0 0 0 0 2 0 0 8 0 1010.5073 Q01968 Q01968 571 578 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.0085009 113.41 By MS/MS 4 0 1 1 1465900 1465900 0 3223 1273 3337 7531 6226 6226 1 137950 0 EFYSEILDK SKRLKKVWKPQLFEREFYSEILDKKFTVTV PQLFEREFYSEILDKKFTVTVTMRTLDLID R E F D K K 0 0 0 1 0 0 2 0 0 1 1 1 0 1 0 1 0 0 1 0 0 0 9 0 1142.5496 Q13084 Q13084 113 121 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.0027047 113.26 By MS/MS 8.5 0.5 1 1 2 1210100 1210100 0 3224 1350 3338 7532;7533 6227 6227 1 15601 0 EGAFSNFPISEETIK ESNSEIEQEIPVEQKEGAFSNFPISEETIK EGAFSNFPISEETIKLLKGRGVTFLFPIQA K E G I K L 1 0 1 0 0 0 3 1 0 2 0 1 0 2 1 2 1 0 0 0 0 0 15 0 1667.8043 Q9NR30;Q9BQ39 Q9NR30 185 199 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 yes no 2 5.3612E-07 207.34 By MS/MS 4 0 1 1 394390 394390 0 3225 2545 3339 7534 6228 6228 1 37115 0 EGAIIVDPAR FDALKEGVKKGFRGKEGAIIVDPARELKVL GFRGKEGAIIVDPARELKVLISNLLDLLTE K E G A R E 2 1 0 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1039.5662 Q9H3U1 Q9H3U1 280 289 UNC45A Protein unc-45 homolog A yes yes 2 0.00028316 141.48 By MS/MS 4.5 0.5 1 1 2 1234600 1234600 0 3226 2442 3340 7535;7536 6229 6229 1 79190 0 EGALCEENMR EIKDSVVAGFQWATKEGALCEENMRGVRFD QWATKEGALCEENMRGVRFDVHDVTLHADA K E G M R G 1 1 1 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1207.4962 P13639 P13639 689 698 EEF2 Elongation factor 2 yes yes 2 1.3005E-14 229.55 By MS/MS 4.67 0.943 2 1 3 10072000 10072000 0 3227 602 3341;3342 7537;7538;7539 6230;6231;6232 6230 283 3 899260 0 EGALDLSGLR GEDSARETPIGLVPKEGALDLSGLRAIDTT GLVPKEGALDLSGLRAIDTTQLFSLPKDFW K E G L R A 1 1 0 1 0 0 1 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1029.5455 Q16822 Q16822 579 588 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.00016765 137.05 By MS/MS By MS/MS 6.17 1.07 2 2 1 1 4 2 10570000 10455000 115400 3228 1560 3343 7540;7541;7542;7543;7544;7545 6233;6234;6235;6236 6234 4 104170 105450 EGALGFFK RYKGLMDCAKQVLQKEGALGFFKGLSPSLL AKQVLQKEGALGFFKGLSPSLLKAALSTGF K E G F K G 1 0 0 0 0 0 1 2 0 0 1 1 0 2 0 0 0 0 0 0 0 0 8 0 867.44905 Q9HC21 Q9HC21 276 283 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0066318 117.93 By MS/MS 8 0 1 1 1106400 1106400 0 3229 2509 3344 7546 6237 6237 1 13968 0 EGATLVYGGR AHLEKLLQYCETGVKEGATLVYGGRQVQRP ETGVKEGATLVYGGRQVQRPGFFMEPTVFT K E G G R Q 1 1 0 0 0 0 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1021.5193 Q3SY69 Q3SY69 789 798 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 1.3376E-05 172.25 By MS/MS 4 0 1 1 1244100 1244100 0 3230 1578 3345 7547 6238 6238 1 117080 0 EGATVYATGTHAQVEDGR PRVIRCMTNTPVVVREGATVYATGTHAQVE TVYATGTHAQVEDGRLMEQLLSSVGFCTEV R E G G R L 3 1 0 1 0 1 2 3 1 0 0 0 0 0 0 0 3 0 1 2 0 0 18 0 1860.8602 P32322 P32322 130 147 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.012606 82.837 By MS/MS 8 0 1 1 10870000 10870000 0 3231 797 3346 7548 6239 6239 1 137230 0 EGAVLKPELK KMYKVYLGDIPLKTKEGAVLKPELKRDPVS PLKTKEGAVLKPELKRDPVSTRVKLKIVPH K E G L K R 1 0 0 0 0 0 2 1 0 0 2 2 0 0 1 0 0 0 0 1 0 0 10 1 1082.6336 Q5VYK3 Q5VYK3 316 325 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 8.5704E-05 169.65 By MS/MS 2 0 1 1 1194300 1194300 0 3232 1656 3347 7549 6240 6240 1 403950 0 EGCLAFGTDDGK GVKSKVTALCWHPTKEGCLAFGTDDGKVGL PTKEGCLAFGTDDGKVGLYDTYSNKPPQIS K E G G K V 1 0 0 2 1 0 1 3 0 0 1 1 0 1 0 0 1 0 0 0 0 0 12 0 1268.5343 Q8TEQ6 Q8TEQ6 439 450 GEMIN5 Gem-associated protein 5 yes yes 2 3.4786E-05 172.21 By MS/MS 3 0 1 1 591620 591620 0 3233 2002 3348 7550 6241 6241 1 10825 0 EGDAHPLGALPVGTLINNVESEPGR ILNSNHIGRMAVAAREGDAHPLGALPVGTL PVGTLINNVESEPGRGAQYIRAAGTCGVLL R E G G R G 2 1 2 1 0 0 3 4 1 1 3 0 0 0 3 1 1 0 0 2 0 0 25 0 2541.2823 Q5T653 Q5T653 178 202 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 3 2.8778E-05 104.3 By MS/MS 8 0 1 1 183880 183880 0 3234 1634 3349 7551 6242 6242 1 2321.4 0 EGDLITLLVPEAR FSHAAGDNSTLLSFKEGDLITLLVPEARDG FKEGDLITLLVPEARDGWHYGESEKTKMRG K E G A R D 1 1 0 1 0 0 2 1 0 1 3 0 0 0 1 0 1 0 0 1 0 0 13 0 1424.7875 Q9UQB8 Q9UQB8 398 410 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 2 0.00040852 141.1 By MS/MS 6 0 1 1 208660 208660 0 3235 2806 3350 7552 6243 6243 1 1434.4 0 EGDLLFTVAK LQGHERSITQIKYNREGDLLFTVAKDPIVN IKYNREGDLLFTVAKDPIVNVWYSVNGERL R E G A K D 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1091.5863 Q13347 Q13347 21 30 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.00017955 148.52 By MS/MS 8.5 1.12 1 1 1 1 4 12247000 12247000 0 3236 1372 3351 7553;7554;7555;7556 6244 6244 1 199020 0 EGDLTNLLQNQAVK EKTADKLQEFLQTLREGDLTNLLQNQAVKG REGDLTNLLQNQAVKGKVAGALLRAIFKGS R E G V K G 1 0 2 1 0 2 1 1 0 0 3 1 0 0 0 0 1 0 0 1 0 0 14 0 1541.8049 Q9NVI1 Q9NVI1 26 39 FANCI Fanconi anemia group I protein yes yes 2 1.6687E-07 261.35 By MS/MS 3.5 0.5 1 1 2 876880 876880 0 3237 2597 3352 7557;7558 6245 6245 1 59600 0 EGDPGTIFFFR DAANILVMGVENSAKEGDPGTIFFFREGAA NSAKEGDPGTIFFFREGAAVFWNVKDKTMK K E G F R E 0 1 0 1 0 0 1 2 0 1 0 0 0 3 1 0 1 0 0 0 0 0 11 0 1284.6139 Q9NWS8 Q9NWS8 220 230 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 0.00012362 149.82 By MS/MS 7.5 0.5 1 1 2 880990 880990 0 3238 2611 3353 7559;7560 6246;6247 6247 2 12534 0 EGDQTSNNIPADIVFVLK VKKGWKEGTKITFPKEGDQTSNNIPADIVF QTSNNIPADIVFVLKDKPHNIFKRDGSDVI K E G L K D 1 0 2 2 0 1 1 1 0 2 1 1 0 1 1 1 1 0 0 2 0 0 18 0 1958.9949 P25685 P25685 223 240 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.0049169 94.023 By MS/MS 7.5 0.5 1 1 2 437810 437810 0 3239 722 3354 7561;7562 6248 6248 0 6670.5 0 EGDVLTLLESER DTSRSIIRNVKGPVREGDVLTLLESEREAR PVREGDVLTLLESEREARRLR_________ R E G E R E 0 1 0 1 0 0 3 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1359.6882 P62857 P62857 52 63 RPS28 40S ribosomal protein S28 yes yes 2 1.3326E-08 211.64 By MS/MS By MS/MS 10 0 2 1 1 5596100 5389200 206990 3240 1178 3355 7563;7564 6249;6250 6250 2 290460 265000 EGDVLTLLESEREAR DTSRSIIRNVKGPVREGDVLTLLESEREAR EGDVLTLLESEREARRLR____________ R E G A R R 1 2 0 1 0 0 4 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 15 1 1715.869 P62857 P62857 52 66 RPS28 40S ribosomal protein S28 yes yes 2;3 0.00017867 169.21 By MS/MS 10 0 2 2 662880 662880 0 3241 1178 3356 7565;7566 6251;6252 6252 2 35727 0 EGDYVLFHHEGGVDVGDVDAK HSQAEEFYVCIYATREGDYVLFHHEGGVDV FHHEGGVDVGDVDAKAQKLLVGVDEKLNPE R E G A K A 1 0 0 4 0 0 2 4 2 0 1 1 0 1 0 0 0 0 1 4 0 0 21 0 2257.0287 P53396 P53396 128 148 ACLY ATP-citrate synthase yes yes 3 0.0063459 81.788 By MS/MS 4 0 1 1 1624600 1624600 0 3242 1030 3357 7567 6253 6253 1 152890 0 EGEEAGPGDPLLEAVPK DSGLWVPNSKASEAKEGEEAGPGDPLLEAV EEAGPGDPLLEAVPKTGDEKDVSV______ K E G P K T 2 0 0 1 0 0 4 3 0 0 2 1 0 0 3 0 0 0 0 1 0 0 17 0 1706.8363 Q16543 Q16543 353 369 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 2 0.00012929 184.34 By MS/MS 6.5 0.5 1 1 2 2198800 2198800 0 3243 1551 3358 7568;7569 6254 6254 1 16862 0 EGEEEQAINR KLVPDLLAIVQRKKKEGEEEQAINRQTALY QRKKKEGEEEQAINRQTALYTLKLLCKNFG K E G N R Q 1 1 1 0 0 1 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 10 0 1173.5262 Q9H583 Q9H583 1658 1667 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 1.7344E-05 169.65 By MS/MS 2 0 1 1 728640 728640 0 3244 2451 3359 7570 6255 6255 1 246460 0 EGELLCGVLDK GFNPDSMCESQVIIREGELLCGVLDKAHYG VIIREGELLCGVLDKAHYGSSAYGLVHCCY R E G D K A 0 0 0 1 1 0 2 2 0 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1231.6118 O95602 O95602 741 751 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 8.1158E-05 169.76 By MS/MS 2.5 0.5 1 1 2 418290 418290 0 3245 418 3360 7571;7572 6256;6257 6256 2 108390 0 EGELYFPEDR CGYGSQEALPMRPAREGELYFPEDREVNLV MRPAREGELYFPEDREVNLVELALATNIPK R E G D R E 0 1 0 1 0 0 3 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1253.5564 Q9Y6J9 Q9Y6J9 96 105 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 2 0.054298 70.256 By MS/MS 5 0 1 1 350410 350410 0 3246 2946 3361 7573 6258 6258 1 3514.4 0 EGERPSLR EALIESLCEKLVKFREGERPSLRLQLLSNL EKLVKFREGERPSLRLQLLSNLFHGMDKNT R E G L R L 0 2 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 8 1 942.48829 Q7L2H7 Q7L2H7 95 102 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 0.050132 63.419 By MS/MS 7 0 1 1 9720200 9720200 0 3247 1762 3362 7574 6259 6259 1 152590 0 EGFDSISSSSK MMQQLFLDRLQTLTKEGFDSISSSSKELLV TLTKEGFDSISSSSKELLVSALQELESSTS K E G S K E 0 0 0 1 0 0 1 1 0 1 0 1 0 1 0 5 0 0 0 0 0 0 11 0 1142.5091 Q8WTW3 Q8WTW3 432 442 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.043234 73.499 By MS/MS 4 0 1 1 1510200 1510200 0 3248 2010 3363 7575 6260 6260 1 142120 0 EGFTQASLGLLANQR AVICTNGRRHLNIAKEGFTQASLGLLANQR EGFTQASLGLLANQRKRQLLIGLLKSLRTI K E G Q R K 2 1 1 0 0 2 1 2 0 0 3 0 0 1 0 1 1 0 0 0 0 0 15 0 1603.8318 Q96JG6 Q96JG6 148 162 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 1.5499E-16 256.95 By MS/MS 4.5 0.5 1 1 2 919430 919430 0 3249 2178 3364 7576;7577 6261 6261 1 72951 0 EGFVEYTEQVVK STACQMLVCYAKELKEGFVEYTEQVVKLMV ELKEGFVEYTEQVVKLMVPLLKFYFHDGVR K E G V K L 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 0 1 0 1 3 0 0 12 0 1426.698 O00410 O00410 694 705 IPO5 Importin-5 no no 2 1.6022E-13 246.86 By MS/MS 5 0.816 1 1 1 3 7708000 7708000 0 3250 103 3365 7578;7579;7580 6262;6263 6262 2 517580 0 EGGAGAVDEDDFIK KPGSAGGPKVGGASKEGGAGAVDEDDFIKA KEGGAGAVDEDDFIKAFTDVPSIQIYSSRE K E G I K A 2 0 0 3 0 0 2 3 0 1 0 1 0 1 0 0 0 0 0 1 0 0 14 0 1421.6311 O75122 O75122 59 72 CLASP2 CLIP-associating protein 2 yes yes 2 0.0088181 113.67 By MS/MS 3 0 1 1 634120 634120 0 3251 292 3366 7581 6264 6264 1 11603 0 EGGGDEPLNFLDPK EQRKLARQRSRAWLKEGGGDEPLNFLDPKV KEGGGDEPLNFLDPKVAQRVLATQPGPGRG K E G P K V 0 0 1 2 0 0 2 3 0 0 2 1 0 1 2 0 0 0 0 0 0 0 14 0 1486.694 Q5JTH9 Q5JTH9 1111 1124 RRP12 RRP12-like protein yes yes 2 6.9333E-05 181.66 By MS/MS 3 0 1 1 194680 194680 0 3252 1610 3367 7582 6265;6266 6266 2 3562.1 0 EGGGNNLYGEEMVQALKQLK EALAAPSRFVLKPQREGGGNNLYGEEMVQA NLYGEEMVQALKQLKDSEERASYILMEKIE R E G L K D 1 0 2 0 0 2 3 4 0 0 3 2 1 0 0 0 0 0 1 1 0 0 20 1 2177.0787 P48637 P48637 368 387 GSS Glutathione synthetase yes yes 3 0.01717 68.129 By MS/MS By MS/MS 5.78 2.1 1 1 2 2 2 1 6 3 65439000 60919000 4520000 3253 939 3368 7583;7584;7585;7586;7587;7588;7589;7590;7591 6267;6268;6269;6270;6271;6272 6271 492 6 2139700 5566700 EGGPNPEHNSNLANILEVCR RIFSKLCLNIRLAVKEGGPNPEHNSNLANI PEHNSNLANILEVCRSKHMPKSTIETALKM K E G C R S 1 1 4 0 1 0 3 2 1 1 2 0 0 0 2 1 0 0 0 1 0 0 20 0 2219.0389 Q9BSH4 Q9BSH4 94 113 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 3 2.0855E-05 166.77 By MS/MS 8 0 1 1 2264300 2264300 0 3254 2306 3369 7592 6273 6273 1 28587 0 EGIPALDNFLDK PSQVVAETRKRKGLKEGIPALDNFLDKL__ GLKEGIPALDNFLDKL______________ K E G D K L 1 0 1 2 0 0 1 1 0 1 2 1 0 1 1 0 0 0 0 0 0 0 12 0 1330.6769 P13639 P13639 846 857 EEF2 Elongation factor 2 yes yes 2 0.04476 72.096 By MS/MS 4.5 0.5 1 1 2 411320 411320 0 3255 602 3370 7593;7594 6274 6274 1 31622 0 EGIPALDNFLDKL PSQVVAETRKRKGLKEGIPALDNFLDKL__ LKEGIPALDNFLDKL_______________ K E G K L - 1 0 1 2 0 0 1 1 0 1 3 1 0 1 1 0 0 0 0 0 0 0 13 1 1443.7609 P13639 P13639 846 858 EEF2 Elongation factor 2 yes yes 2 0.0012848 158.08 By MS/MS 4.67 0.943 2 1 3 225850 225850 0 3256 602 3371 7595;7596;7597 6275;6276;6277;6278 6277 4 12023 0 EGIREETVSLR DVYTGDALRICIVTKEGIREETVSLRKD__ IVTKEGIREETVSLRKD_____________ K E G L R K 0 2 0 0 0 0 3 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 1 1287.6783 P20618 P20618 229 239 PSMB1 Proteasome subunit beta type-1 yes yes 2 5.0574E-05 172.98 By MS/MS 8.5 0.5 1 1 2 1172300 1172300 0 3257 672 3372 7598;7599 6279 6279 1 20737 0 EGITGLYR MYSGTFDCFRKTLFREGITGLYRGMAAPII FRKTLFREGITGLYRGMAAPIIGVTPMFAV R E G Y R G 0 1 0 0 0 0 1 2 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 907.47633 O43772 O43772 66 73 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.021662 97.798 By MS/MS 8.5 0.5 1 1 2 5237800 5237800 0 3258 234 3373 7600;7601 6280 6280 1 67564 0 EGIVALRR NQKGIDPFSLDALSKEGIVALRRAKRRNME SLDALSKEGIVALRRAKRRNMERLTLACGG K E G R R A 1 2 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 1 912.5505 P40227 P40227 308 315 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.025161 114.59 By MS/MS By matching 6 0 2 1 1 67894000 67797000 96274 3259 858 3374 7602;7603 6281 6281 1 466050 98654 EGIVLHSTK ILGVGISTGGRVNPREGIVLHSTKLIQEWN GRVNPREGIVLHSTKLIQEWNSVDLRTPLS R E G T K L 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 982.54475 Q9Y223 Q9Y223 482 490 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.048307 76.679 By MS/MS 5 0 1 1 866300 866300 0 3260 2808 3375 7604 6282 6282 1 8688.6 0 EGIVTATEQEVK EKYAKFFEDYGLFMREGIVTATEQEVKEDI FMREGIVTATEQEVKEDIAKLLRYESSALP R E G V K E 1 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 2 0 0 2 0 0 12 0 1302.6667 Q12931 Q12931 450 461 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 6.8545E-06 181.87 By MS/MS By MS/MS 5 0 2 1 1 2534700 2484900 49786 3261 1340 3376 7605;7606 6283;6284 6284 2 24922 41810 EGIVTATEQEVKEDIAK EKYAKFFEDYGLFMREGIVTATEQEVKEDI IVTATEQEVKEDIAKLLRYESSALPSGQLT R E G A K L 2 0 0 1 0 1 4 1 0 2 0 2 0 0 0 0 2 0 0 2 0 0 17 1 1858.9524 Q12931 Q12931 450 466 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.00048215 190.34 By MS/MS 5.5 0.5 2 2 4 3615200 3615200 0 3262 1340 3377 7607;7608;7609;7610 6285;6286 6286 2 31462 0 EGLAELYEYK LAEIFKKIGSKENTKEGLAELYEYKKKYSD KENTKEGLAELYEYKKKYSDADIEPFLKNS K E G Y K K 1 0 0 0 0 0 3 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1213.5867 Q14008 Q14008 1848 1857 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.036043 85.862 By MS/MS 2.5 0.5 1 1 2 787520 787520 0 3263 1417 3378 7611;7612 6287 6287 1 250180 0 EGLDEVAGIINDAK ELVSKIGDKNWKIRKEGLDEVAGIINDAKF KEGLDEVAGIINDAKFIQPNIGELPTALKG K E G A K F 2 0 1 2 0 0 2 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 14 0 1442.7253 Q14008 Q14008 879 892 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00054037 162.68 By MS/MS 2.5 0.5 1 1 2 933210 933210 0 3264 1417 3379 7613;7614 6288;6289 6288 2 279000 0 EGLEFAVIR CRYILEMYCEEPFVREGLEFAVIRVKGQSF EEPFVREGLEFAVIRVKGQSFMMHQIRKMV R E G I R V 1 1 0 0 0 0 2 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1032.5604 Q9Y606 Q9Y606 275 283 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.00078032 138.1 By MS/MS 7 0 1 1 598930 598930 0 3265 2929 3380 7615 6290 6290 1 9402.1 0 EGLELPEDEEEKKK QLKEFDGKSLVSVTKEGLELPEDEEEKKKM KEGLELPEDEEEKKKMEESKAKFENLCKLM K E G K K M 0 0 0 1 0 0 6 1 0 0 2 3 0 0 1 0 0 0 0 0 0 0 14 2 1671.8203 P07900;Q58FG0;P08238;Q58FF7 P08238 539 552 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 0.002334 168.3 By MS/MS 4 0 1 1 1525700 1525700 0 3266 521;513 3381 7616 6291 6291 1 143580 0 EGLEYIPLR PWFFKHVENYLKTNREGLEYIPLRHYYHRH YLKTNREGLEYIPLRHYYHRHTRSIFWELQ R E G L R H 0 1 0 0 0 0 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 9 0 1088.5866 Q15392 Q15392 317 325 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0025362 114.5 By MS/MS 3.83 2.11 1 1 1 1 1 1 6 4329500 4329500 0 3267 1507 3382 7617;7618;7619;7620;7621;7622 6292;6293;6294 6293 3 347840 0 EGLLFEGR YLGELVRLILVKMAKEGLLFEGRITPELLT ILVKMAKEGLLFEGRITPELLTRGKFNTSD K E G G R I 0 1 0 0 0 0 2 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 919.47633 P19367 P19367 316 323 HK1 Hexokinase-1 yes yes 2 0.00070398 155.75 By MS/MS 4.5 0.5 1 1 2 1812200 1812200 0 3268 660 3383 7623;7624 6295 6295 1 148870 0 EGLNLPSQLAHR SIEDICHVLSTVCKKEGLNLPSQLAHRLAE CKKEGLNLPSQLAHRLAEKSCRNLRKALLM K E G H R L 1 1 1 0 0 1 1 1 1 0 3 0 0 0 1 1 0 0 0 0 0 0 12 0 1333.7102 P40938 P40938 203 214 RFC3 Replication factor C subunit 3 yes yes 2 0.00038811 138.22 By MS/MS 7 0 1 1 811520 811520 0 3269 864 3384 7625 6296 6296 1 12739 0 EGLPVALDK ERLTQDAVAKANQTKEGLPVALDKHILGFD KANQTKEGLPVALDKHILGFDTGDAVLNEA K E G D K H 1 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 9 0 940.52295 Q9Y224 Q9Y224 177 185 C14orf166 UPF0568 protein C14orf166 yes yes 2 0.002535 119.21 By MS/MS 8 0 1 1 841650 841650 0 3270 2809 3385 7626 6297 6297 1 10626 0 EGLSFLGGLR DLKQLNQVNFTLPKKEGLSFLGGLRSKNDV TLPKKEGLSFLGGLRSKNDVLSRSNVCING K E G L R S 0 1 0 0 0 0 1 3 0 0 3 0 0 1 0 1 0 0 0 0 0 0 10 0 1047.5713 Q6WKZ4 Q6WKZ4 297 306 RAB11FIP1 Rab11 family-interacting protein 1 yes yes 2 0.0022662 111.74 By MS/MS 5 0 1 1 125140 125140 0 3271 1735 3386 7627 6298 6298 1 1255 0 EGLTCPVGIALTPK ILHFPKGGGYSVLIREGLTCPVGIALTPKG REGLTCPVGIALTPKGQLLVLDCWDHCIKI R E G P K G 1 0 0 0 1 0 1 2 0 1 2 1 0 0 2 0 2 0 0 1 0 0 14 0 1454.7803 Q13049 Q13049 614 627 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 2 0.0004236 136.81 By MS/MS 5 0 1 1 1015400 1015400 0 3272 1349 3387 7628 6299 6299 1 10184 0 EGLVDTAVK GLTPTEFFFHTMAGREGLVDTAVKTAETGY HTMAGREGLVDTAVKTAETGYMQRRLVKSL R E G V K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 0 930.50221 O95602;O14802 O14802 856 864 POLR1A;POLR3A DNA-directed RNA polymerase I subunit RPA1;DNA-directed RNA polymerase III subunit RPC1 no no 2 0.028713 85.161 By MS/MS 2.5 0.5 1 1 2 1434200 1434200 0 3273 139;418 3388 7629;7630 6300 6300 1 119380 0 EGLVPVSEDPVAIK PAISPLVSEKQVEVKEGLVPVSEDPVAIKI KEGLVPVSEDPVAIKIAELLENVTLIHKPV K E G I K I 1 0 0 1 0 0 2 1 0 1 1 1 0 0 2 1 0 0 0 3 0 0 14 0 1451.7872 Q14694 Q14694 382 395 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 0.0053189 103.08 By MS/MS 4 0 1 1 904420 904420 0 3274 1453 3389 7631 6301 6301 1 85112 0 EGLVVRPQR AALDSRKNYNWAITREGLVVRPQRRDS___ NWAITREGLVVRPQRRDS____________ R E G Q R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 9 1 1052.6091 Q9BYN8 Q9BYN8 194 202 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.0088047 120.62 By MS/MS 8.5 0.5 1 1 2 5713700 5713700 0 3275 2374 3390 7632;7633 6302;6303 6303 2 88848 0 EGLYITEEIYK TPATGTPVVGGLTYREGLYITEEIYKTGLL LTYREGLYITEEIYKTGLLSGLDIMEVNPS R E G Y K T 0 0 0 0 0 0 3 1 0 2 1 1 0 0 0 0 1 0 2 0 0 0 11 0 1356.6813 P05089 P05089 256 266 ARG1 Arginase-1 yes yes 2 0.0096035 111.06 By matching By MS/MS 3.5 0.5 1 1 1 1 175730 90800 84934 3276 484 3391 7634;7635 6304 6304 1 8544.9 10811 EGLYQYK YLELCVDLRKSHLAKEGLYQYKNICQQVNI LRKSHLAKEGLYQYKNICQQVNIKSLEDVV K E G Y K N 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 2 0 0 0 7 0 899.43888 Q14152 Q14152 69 75 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.018013 114.59 By MS/MS By matching 3.75 0.829 2 1 1 3 1 47991000 47643000 347350 3277 1422 3392 7636;7637;7638;7639 6305 6305 1 1085000 44212 EGMFNNANVLFK RTHFTHSQFIVVSLKEGMFNNANVLFKTKF SLKEGMFNNANVLFKTKFVDGVSTVARFTQ K E G F K T 1 0 3 0 0 0 1 1 0 0 1 1 1 2 0 0 0 0 0 1 0 0 12 0 1382.6653 O95347 O95347 1147 1158 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 3.3606E-05 172.23 By MS/MS 3 0 1 1 165370 165370 0 3278 405 3393 7640 6306 6306 157 1 3025.8 0 EGMNIVEAMER TEWLDGKHVVFGKVKEGMNIVEAMERFGSR GKVKEGMNIVEAMERFGSRNGKTSKKITIA K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00064335 115.7 By MS/MS 10 0 3 3 1146900 1146900 0 3279 1188 3394;3395;3396 7641;7642;7643 6307;6308;6309;6310 6307 688;689 4 61812 0 EGNAVAVR ______________________________ DIFTQCREGNAVAVRLWLDNTENDLNQGDD R E G V R L 2 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 8 0 814.42972 Q13418 Q13418 10 17 ILK Integrin-linked protein kinase yes yes 2 0.036473 106.42 By MS/MS 8 0 1 1 55976 0 55976 3280 1380 3397 7644 6311 6311 0 0 75537 EGNDLYHEMIESGVINLK HGGYSVFAGVGERTREGNDLYHEMIESGVI DLYHEMIESGVINLKDATSKVALVYGQMNE R E G L K D 0 0 2 1 0 0 3 2 1 2 2 1 1 0 0 1 0 0 1 1 0 0 18 0 2059.9885 P06576 P06576 242 259 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 2.0173E-71 365.6 By MS/MS 6.25 0.433 3 1 4 16457000 16457000 0 3281 497 3398;3399 7645;7646;7647;7648 6312;6313;6314 6314 197 3 115440 0 EGNDLYHEMIESGVINLKDATSK HGGYSVFAGVGERTREGNDLYHEMIESGVI MIESGVINLKDATSKVALVYGQMNEPPGAR R E G S K V 1 0 2 2 0 0 3 2 1 2 2 2 1 0 0 2 1 0 1 1 0 0 23 1 2562.2272 P06576 P06576 242 264 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3;4 4.9715E-15 243.23 By MS/MS 6 0 2 2 5610900 5610900 0 3282 497 3400 7649;7650 6315;6316 6316 2 38570 0 EGNFDIVSGTR SHHPKFIPEFIRKQKEGNFDIVSGTRYKGN RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK K E G T R Y 0 1 1 1 0 0 1 2 0 1 0 0 0 1 0 1 1 0 0 1 0 0 11 0 1193.5677 O60762 O60762 137 147 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 8.8498E-08 202.31 By MS/MS By MS/MS 8.6 0.8 3 1 1 4 1 38366000 38179000 187140 3283 275 3401 7651;7652;7653;7654;7655 6317;6318;6319;6320 6318 4 508400 252540 EGNQIPGFPDR SRFFDKVIEKRYFLREGNQIPGFPDRKRFG YFLREGNQIPGFPDRKRFGAGTLKSLHYD_ R E G D R K 0 1 1 1 0 1 1 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 11 0 1228.5836 Q5HYI8 Q5HYI8 212 222 RABL3 Rab-like protein 3 yes yes 2 0.0085771 94.465 By MS/MS 8 0 1 1 1704100 1704100 0 3284 1601 3402 7656 6321 6321 1 21514 0 EGNVLGHSR SRSLESIKGIAVMDKEGNVLGHSRIAGTKA IAVMDKEGNVLGHSRIAGTKAVRETLASRI K E G S R I 0 1 1 0 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 967.48354 Q6P4A7 Q6P4A7 231 239 SFXN4 Sideroflexin-4 yes yes 2 0.0016061 126.31 By MS/MS 7 0 1 1 1070600 1070600 0 3285 1710 3403 7657 6322 6322 1 16807 0 EGNVPNIIIAGPPGTGK VGNEDTVSRLEVFAREGNVPNIIIAGPPGT NVPNIIIAGPPGTGKTTSILCLARALLGPA R E G G K T 1 0 2 0 0 0 1 4 0 3 0 1 0 0 3 0 1 0 0 1 0 0 17 0 1632.8835 P35250 P35250 66 82 RFC2 Replication factor C subunit 2 yes yes 2 3.442E-07 217.2 By MS/MS 8 0.816 1 1 1 3 6580800 6580800 0 3286 817 3404 7658;7659;7660 6323;6324 6323 2 101190 0 EGPALLLLSR PGRSPAAAIEEPWGREGPALLLLSRFSQAP EPWGREGPALLLLSRFSQAPDPSGALVTGP R E G S R F 1 1 0 0 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 0 0 0 10 0 1067.6339 Q96C12 Q96C12 522 531 ARMC5 Armadillo repeat-containing protein 5 yes yes 2 0.0061118 107.21 By MS/MS 4.5 0.5 1 1 2 331890 331890 0 3287 2119 3405 7661;7662 6325 6325 1 25165 0 EGPAVVGQFIQDVK SIAKCVAALTRACPKEGPAVVGQFIQDVKN KEGPAVVGQFIQDVKNSRSTDSIRLLALLS K E G V K N 1 0 0 1 0 2 1 2 0 1 0 1 0 1 1 0 0 0 0 3 0 0 14 0 1485.7827 Q86VP6 Q86VP6 813 826 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00041322 194.48 By MS/MS 4 0.816 1 1 1 3 1755500 1755500 0 3288 1831 3406 7663;7664;7665 6326;6327;6328 6327 3 103770 0 EGPEPPEEVPPPTTPPVPK GSFEASPVEPQLPSKEGPEPPEEVPPPTTP PPEEVPPPTTPPVPKVEPKGDGIGPTRQPP K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2 0.00013301 140.33 By MS/MS 2 0 1 1 685820 685820 0 3289 938 3407 7666 6329 6329 1 231970 0 EGPHYTPPIPNYQPPEGR AEAIKRDPNLFPFEKEGPHYTPPIPNYQPP HYTPPIPNYQPPEGRYNDITKVYTQVEFKR K E G G R Y 0 1 1 0 0 1 2 2 1 1 0 0 0 0 6 0 1 0 2 0 0 0 18 0 2047.9752 Q9NQ50 Q9NQ50 174 191 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 3 0.0033887 97.823 By MS/MS 9 0 1 1 1279700 1279700 0 3290 2536 3408 7667 6330 6330 1 25185 0 EGPITEDFFK FQLTSDEMSLLRGTREGPITEDFFKALGRV LRGTREGPITEDFFKALGRVKQIHNDVKVL R E G F K A 0 0 0 1 0 0 2 1 0 1 0 1 0 2 1 0 1 0 0 0 0 0 10 0 1181.5605 Q9Y2V7 Q9Y2V7 175 184 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.008962 96.668 By MS/MS 5 0 1 1 1676200 1676200 0 3291 2845 3409 7668 6331 6331 1 16812 0 EGPLCDELIR SVKDSIVQGFQWGTREGPLCDELIRNVKFK QWGTREGPLCDELIRNVKFKILDAVVAQEP R E G I R N 0 1 0 1 1 0 2 1 0 1 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1200.5809 Q15029 Q15029 776 785 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0010691 122.28 By MS/MS 3 1.41 1 1 1 1 1 5 10703000 10703000 0 3292 1476 3410 7669;7670;7671;7672;7673 6332;6333;6334 6333 3 680740 0 EGPPFISEAAVR ______________________________ AKREGPPFISEAAVRGNAAVLDYCRTSVSA R E G V R G 2 1 0 0 0 0 2 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 12 0 1271.651 Q9BV81 Q9BV81 9 20 EMC6 ER membrane protein complex subunit 6 yes yes 2 6.5358E-05 162.64 By MS/MS By matching 10 0 2 1 1 4028000 3977100 50878 3293 2330 3411 7674;7675 6335;6336 6336 2 214350 65137 EGPSGSGDSQLSASSR PPVPQGEAEEDSQGKEGPSGSGDSQLSASS GPSGSGDSQLSASSRSESGRMKKSDNKMGI K E G S R S 1 1 0 1 0 1 1 3 0 0 1 0 0 0 1 6 0 0 0 0 0 0 16 0 1520.6703 Q12789 Q12789 743 758 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00053691 164.92 By MS/MS 2.5 0.5 1 1 2 600290 600290 0 3294 1328 3412 7676;7677 6337 6337 1 154580 0 EGPVLATSSGAGVFK TEAGTQPQKGVSQVKEGPVLATSSGAGVFK EGPVLATSSGAGVFKMGRFQVSVAADGAQK K E G F K M 2 0 0 0 0 0 1 3 0 0 1 1 0 1 1 2 1 0 0 2 0 0 15 0 1418.7405 Q9H4A3 Q9H4A3 1842 1856 WNK1 Serine/threonine-protein kinase WNK1 yes yes 2 0.00039313 168.22 By MS/MS 1.5 0.5 1 1 2 316200 316200 0 3295 2443 3413 7678;7679 6338 6338 1 84168 0 EGPYSISVLYGDEEVPR DNADGTQTVNYVPSREGPYSISVLYGDEEV PYSISVLYGDEEVPRSPFKVKVLPTHDASK R E G P R S 0 1 0 1 0 0 3 2 0 1 1 0 0 0 2 2 0 0 2 2 0 0 17 0 1908.9105 P21333 P21333 1516 1532 FLNA Filamin-A yes yes 2 0.00021063 177.81 By MS/MS 1.5 0.5 1 1 2 321990 321990 0 3296 677 3414 7680;7681 6339;6340;6341 6340 3 102020 0 EGQNFIFR YDFDRSSFVFVRKLREGQNFIFRHQHDFDE VFVRKLREGQNFIFRHQHDFDENGIIYWIG R E G F R H 0 1 1 0 0 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 8 0 1009.4981 Q9ULT8 Q9ULT8 1059 1066 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.018523 101.28 By MS/MS 2 0.816 1 1 1 3 1316500 1316500 0 3297 2774 3415 7682;7683;7684 6342;6343;6344 6343 3 315420 0 EGQNYQQNCIK IINIMQDRLKACQQREGQNYQQNCIKEVEQ CQQREGQNYQQNCIKEVEQFTQVAKAYQDR R E G I K E 0 0 2 0 1 3 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 11 0 1380.6092 O96000 O96000 111 121 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 2.1935E-25 272.66 By MS/MS By matching 9.33 0.471 2 1 2 1 3621900 3595000 26950 3298 436 3416 7685;7686;7687 6345 6345 1 72670 61455 EGQNYQQNCIKEVEQFTQVAK IINIMQDRLKACQQREGQNYQQNCIKEVEQ QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA R E G A K A 1 0 2 0 1 5 3 1 0 1 0 2 0 1 0 0 1 0 1 2 0 0 21 1 2540.1966 O96000 O96000 111 131 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.00057013 97.271 By MS/MS 9 0 1 1 288620 288620 0 3299 436 3417 7688 6346;6347 6346 2 5680.1 0 EGRLEDVENLGCR YLIKGMDVYGYLLAREGRLEDVENLGCRLF AREGRLEDVENLGCRLFNISDQHAEPWVVS R E G C R L 0 2 1 1 1 0 3 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 13 1 1545.7206 Q9UJX3 Q9UJX3 318 330 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2;3 0.0010239 158.56 By MS/MS 5.8 0.748 2 2 1 5 6285300 6285300 0 3300 2752 3418 7689;7690;7691;7692;7693 6348;6349 6348 2 56292 0 EGSALSHVR VVITPPYQVENCKGKEGSALSHVRKIVEKH ENCKGKEGSALSHVRKIVEKHFRDVESQKI K E G V R K 1 1 0 0 0 0 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 954.48829 Q3MHD2 Q3MHD2 155 163 LSM12 Protein LSM12 homolog yes yes 2 0.026461 86.136 By MS/MS 8.5 0.5 1 1 2 2088300 2088300 0 3301 1577 3419 7694;7695 6350;6351 6351 2 37374 0 EGSASTEVLR RDMCLEKDTLGLFLREGSASTEVLRTEAEQ GLFLREGSASTEVLRTEAEQCKNLELKDLL R E G L R T 1 1 0 0 0 0 2 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 10 0 1047.5197 O75643 O75643 754 763 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.046202 74.165 By MS/MS 2.5 0.5 1 1 2 793630 793630 0 3302 340 3420 7696;7697 6352 6352 1 239960 0 EGSDGPLATSKPVPAEK PKEKAKNSKKKGAKKEGSDGPLATSKPVPA SDGPLATSKPVPAEKSGLPVGPENGVELSK K E G E K S 2 0 0 1 0 0 2 2 0 0 1 2 0 0 3 2 1 0 0 1 0 0 17 1 1681.8523 P08240 P08240 175 191 SRPR Signal recognition particle receptor subunit alpha yes yes 3 0.039581 63.29 By MS/MS 5 0 1 1 637390 637390 0 3303 522 3421 7698 6353 6353 1 6392.7 0 EGSGLFPDLLVR DPERAIQDAILEVLKEGSGLFPDLLVRETE VLKEGSGLFPDLLVRETEAVIHKHRSATYC K E G V R E 0 1 0 1 0 0 1 2 0 0 3 0 0 1 1 1 0 0 0 1 0 0 12 0 1301.698 Q86Y56 Q86Y56 815 826 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.00028948 144.65 By MS/MS 4.5 0.5 1 1 2 502700 502700 0 3304 1850 3422 7699;7700 6354;6355;6356 6355 3 40501 0 EGSGNPTPLINPLAGR LDLSDFPALADRNRREGSGNPTPLINPLAG GSGNPTPLINPLAGRAPYVGMVTKPANEQS R E G G R A 1 1 2 0 0 0 1 3 0 1 2 0 0 0 3 1 1 0 0 0 0 0 16 0 1591.8318 Q9NZN8 Q9NZN8 240 255 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 2 0.00021492 176.87 By MS/MS 7 0.816 1 1 1 3 3467300 3467300 0 3305 2653 3423 7701;7702;7703 6357;6358 6357 2 28709 0 EGSIEIDIPVPK AKLIILENTIYLFSKEGSIEIDIPVPKYLS FSKEGSIEIDIPVPKYLSSVSSQETQGGPL K E G P K Y 0 0 0 1 0 0 2 1 0 3 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1295.6973 Q96RQ3 Q96RQ3 624 635 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 2.9867E-05 210.08 By MS/MS 5 0 1 1 609630 609630 0 3306 2224 3424 7704 6359 6359 1 6114.3 0 EGSLKDQLALAIGK LNSSELSGLPAGPDREGSLKDQLALAIGKL REGSLKDQLALAIGKLGENMILKRAAWVKV R E G G K L 2 0 0 1 0 1 1 2 0 1 3 2 0 0 0 1 0 0 0 0 0 0 14 1 1441.814 P43897 P43897 179 192 TSFM Elongation factor Ts, mitochondrial yes yes 2;3 5.3812E-07 189.17 By MS/MS 8 0 2 2 1292000 1292000 0 3307 901 3425 7705;7706 6360;6361 6361 2 16312 0 EGSPVLLNCLMYK ENDYYTPTGEFRVDREGSPVLLNCLMYKMC DREGSPVLLNCLMYKMCYYRFGQVYTEAKR R E G Y K M 0 0 1 0 1 0 1 1 0 0 3 1 1 0 1 1 0 0 1 1 0 0 13 0 1522.7524 P46977 P46977 629 641 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 2.2638E-05 186.78 By MS/MS 1.5 0.5 1 1 2 440460 440460 0 3308 923 3426 7707;7708 6362;6363 6362 486 2 131260 0 EGTALVPYGLPCIR YVNPRGVRFTQSSQKEGTALVPYGLPCIRE KEGTALVPYGLPCIRELFRFLISLTNPHDR K E G I R E 1 1 0 0 1 0 1 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 14 0 1544.8021 Q92538 Q92538 392 405 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0045797 105.17 By MS/MS 2 0 1 1 133630 133630 0 3309 2050 3427 7709 6364 6364 1 45200 0 EGTDSSQGIPQLVSNISACQVIAEAVR ______________________________ VSNISACQVIAEAVRTTLGPRGMDKLIVDG K E G V R T 3 1 1 1 1 3 2 2 0 3 1 0 0 0 1 4 1 0 0 3 0 0 27 0 2828.3974 Q99832 Q99832 11 37 CCT7 T-complex protein 1 subunit eta yes yes 3 0.00032226 83.317 By MS/MS 6 0 1 1 151990 151990 0 3310 2270 3428 7710 6365 6365 1 1044.8 0 EGTETFADHREGILK LDTTIMFATAGTLNREGTETFADHREGILK EGTETFADHREGILKTAKVLVEDTKVLVQN R E G L K T 1 1 0 1 0 0 3 2 1 1 1 1 0 1 0 0 2 0 0 0 0 0 15 1 1701.8322 Q9Y490 Q9Y490 2007 2021 TLN1 Talin-1 yes yes 3 0.036848 65.295 By MS/MS 2.5 0.5 1 1 2 1922400 1922400 0 3311 2888 3429 7711;7712 6366 6366 1 552470 0 EGTGSTATSSSSTAGAAGK ______________________________ STATSSSSTAGAAGKGKGKGGSGDSAVKQV K E G G K G 4 0 0 0 0 0 1 4 0 0 0 1 0 0 0 5 4 0 0 0 0 0 19 0 1626.7333 O15372 O15372 6 24 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 5.107E-05 209.25 By MS/MS By MS/MS 5.67 2.9 2 1 1 2 3 1 1 1 9 3 103540000 103220000 323040 3312 186 3430 7713;7714;7715;7716;7717;7718;7719;7720;7721;7722;7723;7724 6367;6368;6369;6370;6371;6372;6373;6374;6375;6376;6377;6378 6376 12 1970500 549420 EGTQEEAASTLLLAEAQQGK LLPPGAPFIELLPVKEGTQEEAASTLLLAE EAASTLLLAEAQQGKEYELVLTDRASLTRC K E G G K E 4 0 0 0 0 3 4 2 0 0 3 1 0 0 0 1 2 0 0 0 0 0 20 0 2073.0226 Q8N2G8 Q8N2G8 328 347 GHDC GH3 domain-containing protein yes yes 2 1.1643E-12 305.14 By MS/MS 6 0 1 1 2809100 2809100 0 3313 1908 3431 7725 6379 6379 1 19310 0 EGVECEVINMR RPVGHCLEAAAVLSKEGVECEVINMRTIRP VLSKEGVECEVINMRTIRPMDMETIEASVM K E G M R T 0 1 1 0 1 0 3 1 0 1 0 0 1 0 0 0 0 0 0 2 0 0 11 0 1334.5959 P11177 P11177 259 269 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 4.2317E-09 207.29 By MS/MS By MS/MS 8.3 1.1 3 3 2 2 8 2 25777000 25679000 98524 3314 575 3432;3433 7726;7727;7728;7729;7730;7731;7732;7733;7734;7735 6380;6381;6382;6383;6384;6385 6381 265 6 391690 154680 EGVHGGLINK TVTKTDKTLVLLMGKEGVHGGLINKKCYEM LLMGKEGVHGGLINKKCYEMASHLRRSQY_ K E G N K K 0 0 1 0 0 0 1 3 1 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1022.5509 P07737 P07737 117 126 PFN1 Profilin-1 yes yes 2 0.011101 91.853 By MS/MS 10 0 1 1 844870 844870 0 3315 510 3434 7736 6386 6386 1 45536 0 EGVHGGLINKK TVTKTDKTLVLLMGKEGVHGGLINKKCYEM LMGKEGVHGGLINKKCYEMASHLRRSQY__ K E G K K C 0 0 1 0 0 0 1 3 1 1 1 2 0 0 0 0 0 0 0 1 0 0 11 1 1150.6459 P07737 P07737 117 127 PFN1 Profilin-1 yes yes 2 0.0036732 120.12 By MS/MS 10 0 1 1 512680 512680 0 3316 510 3435 7737 6387 6387 1 27631 0 EGVLTGSPEQKEEAAK CLPKKGVTSILPVLREGVLTGSPEQKEEAA GVLTGSPEQKEEAAKALGLVIRLTSADALR R E G A K A 2 0 0 0 0 1 4 2 0 0 1 2 0 0 1 1 1 0 0 1 0 0 16 1 1671.8315 Q92616 Q92616 2270 2285 GCN1L1 Translational activator GCN1 yes yes 2 2.4533E-23 227.48 By MS/MS 3 0.816 1 1 1 3 1266800 1266800 0 3317 2064 3436 7738;7739;7740 6388 6388 1 321900 0 EGVREVFETATR RIQAYDYLECSAKTKEGVREVFETATRAAL KTKEGVREVFETATRAALQKRYGSQNGCIN K E G T R A 1 2 0 0 0 0 3 1 0 0 0 0 0 1 0 0 2 0 0 2 0 0 12 1 1392.6997 P62745 P62745 165 176 RHOB Rho-related GTP-binding protein RhoB yes yes 3 0.030716 70.089 By MS/MS 9 0 1 1 288580 288580 0 3318 1167 3437 7741 6389 6389 1 5679.2 0 EGVSAAFAVK NASILNSLYNENLVKEGVSAAFAVKLFKSW ENLVKEGVSAAFAVKLFKSWINEKDINAVA K E G V K L 3 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 10 0 977.5182 Q7L1Q6 Q7L1Q6 179 188 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.0043683 107.01 By MS/MS 7 0 1 1 3331900 3331900 0 3319 1760 3438 7742 6390 6390 1 52304 0 EGVTAMHK DYAIMTGGDVAPMGREGVTAMHKLFDWANT DVAPMGREGVTAMHKLFDWANTSRRGLLLF R E G H K L 1 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 0 8 0 871.42219 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 387 394 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2 0.028218 90.777 By MS/MS 5.33 0.471 2 1 3 5246700 5246700 0 3320 2598;1638 3439;3440 7743;7744;7745 6391;6392 6392 893 2 50882 0 EGYNNPPISGENLIGLSR DAPVDYFYRPETQHREGYNNPPISGENLIG NNPPISGENLIGLSRARRPHNAIFVNFEDE R E G S R A 0 1 3 0 0 0 2 3 0 2 2 0 0 0 2 2 0 0 1 0 0 0 18 0 1928.9592 Q9Y5Q8 Q9Y5Q8 192 209 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 9.3813E-17 249.58 By MS/MS 6 0.816 1 1 1 3 4283400 4283400 0 3321 2919 3441 7746;7747;7748 6393;6394 6393 2 33920 0 EGYSALPQLDIER TTEKRNRNLLYEYAREGYSALPQLDIERFC AREGYSALPQLDIERFCACPEEAAHALELR R E G E R F 1 1 0 1 0 1 2 1 0 1 2 0 0 0 1 1 0 0 1 0 0 0 13 0 1489.7413 Q9NP81 Q9NP81 50 62 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 0.022123 90.614 By MS/MS 6 0 1 1 1501200 1501200 0 3322 2527 3442 7749 6395 6395 1 10320 0 EHALLAYTLGVK VGEFEAGISKNGQTREHALLAYTLGVKQLI QTREHALLAYTLGVKQLIVGVNKMDSTEPP R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 Q5VTE0;P68104;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 8.6315E-07 200.71 By MS/MS 6.36 2.5 1 1 2 3 2 2 11 40447000 40447000 0 3323 1209 3443 7750;7751;7752;7753;7754;7755;7756;7757;7758;7759;7760 6396;6397;6398;6399;6400;6401;6402;6403 6398 8 657010 0 EHALTSGTIK VKLISSDGHEFIVKREHALTSGTIKAMLSG FIVKREHALTSGTIKAMLSGPGQFAENETN R E H I K A 1 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1055.5611 Q15369 Q15369 34 43 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 2 0.00029974 140.35 By MS/MS 10 0 1 1 1408600 1408600 0 3324 1502 3444 7761 6404 6404 1 75917 0 EHCPAGQPVK TRRALDIPLVKNWYREHCPAGQPVKVRVSY KNWYREHCPAGQPVKVRVSYQKLLKYYVLN R E H V K V 1 0 0 0 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 10 0 1121.5288 Q6P2Q9 Q6P2Q9 433 442 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0006166 131.03 By MS/MS 2 0.816 1 1 1 3 924710 924710 0 3325 1708 3445 7762;7763;7764 6405;6406;6407 6406 3 308630 0 EHDPVGQMVNNPK GYQTAFSQLAFAGKKEHDPVGQMVNNPKIH KKEHDPVGQMVNNPKIHLAQSLHKLSTACP K E H P K I 0 0 2 1 0 1 1 1 1 0 0 1 1 0 2 0 0 0 0 2 0 0 13 0 1463.6827 P55060 P55060 913 925 CSE1L Exportin-2 yes yes 2;3 0.0001948 163.38 By MS/MS 4 0 2 2 788770 788770 0 3326 1053 3446;3447 7765;7766 6408;6409 6409 585 2 74229 0 EHFAQFGHVR FVRRIPWTAASSQLKEHFAQFGHVRRCILP SSQLKEHFAQFGHVRRCILPFDKETGFHRG K E H V R R 1 1 0 0 0 1 1 1 2 0 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1226.5945 Q9GZT3 Q9GZT3 37 46 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 6.9625E-06 176.44 By MS/MS 10 0 2 2 6715400 6715400 0 3327 2398 3448 7767;7768 6410;6411 6411 2 361940 0 EHGAFDAVK TDTESELDLISRLSREHGAFDAVKCTHWAE ISRLSREHGAFDAVKCTHWAEGGKGALALA R E H V K C 2 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 9 0 972.46649 P11586 P11586 776 784 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.022856 87.696 By MS/MS 4.5 0.5 1 1 2 2882700 2882700 0 3328 582 3449 7769;7770 6412 6412 1 247240 0 EHIDKYKN IYEGTSQIQRLIVAREHIDKYKN_______ QRLIVAREHIDKYKN_______________ R E H K N - 0 0 1 1 0 0 1 0 1 1 0 2 0 0 0 0 0 0 1 0 0 0 8 2 1045.5193 P11310 P11310 414 421 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.01862 138.83 By MS/MS 7.5 0.5 1 1 2 1132800 1132800 0 3329 577 3450 7771;7772 6413 6413 1 17597 0 EHLLLAR ILVVAANDGPMPQTREHLLLARQIGVEHVV DGPMPQTREHLLLARQIGVEHVVVYVNKAD R E H A R Q 1 1 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 850.50249 P49411 P49411 163 169 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.012539 128.82 By MS/MS By MS/MS 7.83 1.34 1 2 1 1 1 5 1 71364000 71204000 160320 3330 949 3451 7773;7774;7775;7776;7777;7778 6414;6415;6416;6417;6418 6416 5 1116000 288730 EHQHEEIQNVR LQGGMAFLDKRLQVKEHQHEEIQNVRNHIH LQVKEHQHEEIQNVRNHIHSCFSDVTCFLL K E H V R N 0 1 1 0 0 2 3 0 2 1 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1417.6698 Q6DD88 Q6DD88 240 250 ATL3 Atlastin-3 yes yes 3 0.0011942 121.61 By MS/MS 6 0 1 1 2868500 2868500 0 3331 1674 3452 7779 6419 6419 1 19719 0 EHQLASASELPLGSR DNPALNAQAALSQAREHQLASASELPLGSR EHQLASASELPLGSRPAPQPPVPRPEHCEG R E H S R P 2 1 0 0 0 1 2 1 1 0 3 0 0 0 1 3 0 0 0 0 0 0 15 0 1593.8111 O60232 O60232 98 112 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 3.1995E-13 208.82 By MS/MS 9 0 1 1 0 0 0 3332 250 3453 7780 6420 6420 1 0 0 EHTALLK KAIFAGYKRGLRNQREHTALLKIEGVYARD KRGLRNQREHTALLKIEGVYARDETEFYLG R E H L K I 1 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 810.45995 P18077 P18077 23 29 RPL35A 60S ribosomal protein L35a yes yes 2 0.029363 105.2 By MS/MS 10 0 1 1 1051100 1051100 0 3333 650 3454 7781 6421 6421 1 56652 0 EHTEEDFKGR IIQSSLPEGVRLSVKEHTEEDFKGRFKARP RLSVKEHTEEDFKGRFKARPELEELLAKLK K E H G R F 0 1 0 1 0 0 3 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 10 1 1246.5578 Q96GC5 Q96GC5 188 197 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2;3 0.0049078 120.87 By MS/MS 9 0 2 2 2302100 2302100 0 3334 2158 3455 7782;7783 6422;6423 6423 2 45306 0 EHVDKLK WTALDSLQKWASVVREHVDKLKIPPEEMKQ QKWASVVREHVDKLKIPPEEMKQMEQKLIR R E H L K I 0 0 0 1 0 0 1 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 7 1 867.48142 Q9Y6G9 Q9Y6G9 171 177 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.022705 157.21 By MS/MS 6 0 1 1 606870 606870 0 3335 2943 3456 7784 6424 6424 1 4171.8 0 EHVIEALR IGQVIMSIRTKLQNKEHVIEALRRAKFKFP RTKLQNKEHVIEALRRAKFKFPGRQKIHIS K E H L R R 1 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 965.52943 P27635 P27635 146 153 RPL10 60S ribosomal protein L10 yes yes 2 0.025808 93.195 By MS/MS 8.5 0.5 1 1 2 1892900 1892900 0 3336 743 3457 7785;7786 6425 6425 1 31536 0 EHVVAASK VGERQPLLGPPESMREHVVAASKAMKMGDW GPPESMREHVVAASKAMKMGDWKTCHSFII R E H S K A 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 8 0 839.45012 Q99613;B5ME19 Q99613 735 742 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0029997 137.9 By MS/MS By matching 5 2.14 1 2 1 1 1 1 6 1 1892500 1848300 44151 3337 2252 3458 7787;7788;7789;7790;7791;7792;7793 6426;6427;6428 6427 3 35250 94072 EIAAFFPDFSEQR RNTTHGSDSVVSASREIAAFFPDFSEQRWY SREIAAFFPDFSEQRWYEEEEPQLRCGPVC R E I Q R W 2 1 0 1 0 1 2 0 0 1 0 0 0 3 1 1 0 0 0 0 0 0 13 0 1555.7307 O75414 O75414 140 152 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.00042692 131.42 By MS/MS 9 0 1 1 95966 95966 0 3338 325 3459 7794 6429;6430 6430 2 1888.6 0 EIAAVFQDNR SPPQEEIGLIRLLRREIAAVFQDNRMIAVC RLLRREIAAVFQDNRMIAVCQNVALSAEDK R E I N R M 2 1 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1161.5778 Q7Z7H8 Q7Z7H8 85 94 MRPL10 39S ribosomal protein L10, mitochondrial yes yes 2 7.1444E-06 176.33 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 16432000 16371000 60516 3339 1807 3460 7795;7796;7797;7798 6431;6432 6432 2 214790 81663 EIAEAYLGK FYPEEVSSMVLTKMKEIAEAYLGKTVTNAV VLTKMKEIAEAYLGKTVTNAVVTVPAYFND K E I G K T 2 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 992.51786 P11142 P11142 129 137 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.0077269 104.44 By MS/MS 5 0 1 1 7362700 7362700 0 3340 572 3461 7799 6433 6433 1 73844 0 EIAEPLFDLK LQLWAFKLDYDSMEREIAEPLFDLKVGMEQ DSMEREIAEPLFDLKVGMEQLVQNATFRCI R E I L K V 1 0 0 1 0 0 2 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1173.6281 Q9Y613 Q9Y613 796 805 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.02141 86.136 By MS/MS 3 0 1 1 131430 131430 0 3341 2930 3462 7800 6434 6434 1 2404.7 0 EIAQDFK TELLIRKLPFQRLVREIAQDFKTDLRFQSS LPFQRLVREIAQDFKTDLRFQSSAVMALQE R E I F K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 849.42323 Q71DI3;Q16695;P84243;P68431 Q71DI3 74 80 HIST2H3A;HIST3H3;H3F3A;HIST1H3A Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.043363 94.662 By MS/MS 10 0 1 1 421440 421440 0 3342 1215 3463 7801 6435 6435 1 22714 0 EIAQDFKTDLR TELLIRKLPFQRLVREIAQDFKTDLRFQSS RLVREIAQDFKTDLRFQSSAVMALQEASEA R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 Q71DI3;Q16695;P84243;P68431 Q71DI3 74 84 HIST2H3A;HIST3H3;H3F3A;HIST1H3A Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.0025048 131.42 By MS/MS 10 0 1 1 1058900 1058900 0 3343 1215 3464 7802 6436 6436 1 57072 0 EICCYSISCK KQLIEKMNLSAIQDREICCYSISCKEKDNI AIQDREICCYSISCKEKDNIDITLQWLIQH R E I C K E 0 0 0 0 3 0 1 0 0 2 0 1 0 0 0 2 0 0 1 0 0 0 10 0 1318.5356 Q96BM9;Q9NVJ2 Q9NVJ2 156 165 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B no no 2 0.0012813 118.18 By MS/MS 9 0 1 1 837660 837660 0 3344 2599;2114 3465 7803 6437 6437 1 16485 0 EICSLFGEAPQNLSQTQR RTNDKWVIPALKQIREICSLFGEAPQNLSQ SLFGEAPQNLSQTQRSPHVFYRHDLINQLQ R E I Q R S 1 1 1 0 1 3 2 1 0 1 2 0 0 1 1 2 1 0 0 0 0 0 18 0 2076.9899 Q93008 Q93008 575 592 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 1.2831E-07 273.07 By MS/MS 2 0 2 2 597950 597950 0 3345 2085 3466 7804;7805 6438;6439 6438 2 202250 0 EIDDSVLGQTGPYR AAFRALSQGVESVKKEIDDSVLGQTGPYRR KEIDDSVLGQTGPYRRPQRLRKRTEFAGDK K E I Y R R 0 1 0 2 0 1 1 2 0 1 1 0 0 0 1 1 1 0 1 1 0 0 14 0 1548.742 O43615 O43615 189 202 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 4.1973E-24 284.73 By MS/MS 7.5 0.5 1 1 2 11309000 11309000 0 3346 221 3467 7806;7807 6440;6441 6440 2 173820 0 EIDDTYIEDAADVDAR EIVLPENAEKELEEREIDDTYIEDAADVDA IDDTYIEDAADVDARKQAIRDAERVKEMKR R E I A R K 3 1 0 5 0 0 2 0 0 2 0 0 0 0 0 0 1 0 1 1 0 0 16 0 1809.7905 Q99459 Q99459 506 521 CDC5L Cell division cycle 5-like protein yes yes 2 0.035729 74.392 By MS/MS 4 0 1 1 730270 730270 0 3347 2245 3468 7808 6442 6442 0 68723 0 EIDEVGDLLQLK LSAAHTKEILDTALKEIDEVGDLLQLKYSR ALKEIDEVGDLLQLKYSRHRLVPLLDRPFD K E I L K Y 0 0 0 2 0 1 2 1 0 1 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1370.7293 O15270 O15270 527 538 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 5.7509E-09 219.72 By MS/MS 6 0 1 1 1115000 1115000 0 3348 178 3469 7809 6443 6443 1 7664.5 0 EIDGGLETLR ASQVTLEGDKLKVEREIDGGLETLRLKLPA LKVEREIDGGLETLRLKLPAVVTADLRLNE R E I L R L 0 1 0 1 0 0 2 2 0 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1101.5666 P38117 P38117 165 174 ETFB Electron transfer flavoprotein subunit beta yes yes 2 0.037713 78.264 By MS/MS 8 0 1 1 1964900 1964900 0 3349 847 3470 7810 6444 6444 1 24807 0 EIDLFQAR SCNRQLQIDIDCLTKEIDLFQARGPHFNPS DIDCLTKEIDLFQARGPHFNPSAIHNFYDN K E I A R G 1 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 990.51345 Q9NYJ8 Q9NYJ8 612 619 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 8.9402E-05 176.41 By MS/MS 5 0 1 1 1128200 1128200 0 3350 2634 3471 7811 6445 6445 1 11316 0 EIEDFDSLEALR SLKLNTAEDAKDVIKEIEDFDSLEALRLEG VIKEIEDFDSLEALRLEGNTVGVEAARVIA K E I L R L 1 1 0 2 0 0 3 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 12 0 1435.6831 P46060 P46060 44 55 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 5.8061E-25 280.11 By MS/MS 4.5 0.5 1 1 2 1580200 1580200 0 3351 908 3472 7812;7813 6446 6446 1 28112 0 EIEIDIEPTDKVER ______________________________ KEIEIDIEPTDKVERIKERVEEKEGIPPQQ K E I E R I 0 1 0 2 0 0 4 0 0 3 0 1 0 0 1 0 1 0 0 1 0 0 14 1 1684.8519 Q15843 Q15843 12 25 NEDD8 NEDD8 yes yes 2 9.0417E-05 197.73 By MS/MS 4 0 1 1 1420400 1420400 0 3352 1538 3473 7814 6447 6447 1 133670 0 EIELLCQEHGQENDDLVQR EGVEKERDFYFGKLREIELLCQEHGQENDD LCQEHGQENDDLVQRLMDILYASEEHEGHT R E I Q R L 0 1 1 2 1 3 4 1 1 1 3 0 0 0 0 0 0 0 0 1 0 0 19 0 2324.0703 Q15555 Q15555 274 292 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 3 0.00015006 157.58 By MS/MS 7 0 1 1 2710300 2710300 0 3353 1520 3474 7815 6448 6448 1 42547 0 EIEQEAAVELSQLR KWRGKPLFVRHRTQKEIEQEAAVELSQLRD KEIEQEAAVELSQLRDPQHDLDRVKKPEWV K E I L R D 2 1 0 0 0 2 4 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 14 0 1613.8261 P47985 P47985 183 196 UQCRFS1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 2 2.3565E-07 214 By MS/MS 9 0 1 1 142570 142570 0 3354 931 3475 7816 6449 6449 1 2805.9 0 EIESSPQYR EEFRQRELRAAQLAREIESSPQYRLRIAME AAQLAREIESSPQYRLRIAMENDDGRTEEE R E I Y R L 0 1 0 0 0 1 2 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1107.5197 Q8WWM7 Q8WWM7 302 310 ATXN2L Ataxin-2-like protein yes yes 2 0.0014254 128.61 By MS/MS 3 0 1 1 1938000 1938000 0 3355 2036 3476 7817 6450 6450 1 35461 0 EIETYHNLLEGGQEDFESSGAGK QEYSLLLSIKMRLEKEIETYHNLLEGGQED LEGGQEDFESSGAGKIGLGGRGGSGGSYGR K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 0 23 0 2509.1245 P35527;CON__P35527 P35527 450 472 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 1.3065E-41 276.88 By MS/MS By MS/MS 4.8 2.84 3 2 3 2 2 3 1 1 1 2 12 8 44042000 40959000 3083600 + 3356 822 3477 7818;7819;7820;7821;7822;7823;7824;7825;7826;7827;7828;7829;7830;7831;7832;7833;7834;7835;7836;7837 6451;6452;6453;6454;6455;6456;6457;6458;6459;6460;6461;6462;6463;6464;6465;6466;6467;6468;6469 6454 19 1543600 1453900 EIEVGGGR DLKAQLRELNITAAKEIEVGGGRKAIIIFV LNITAAKEIEVGGGRKAIIIFVPVPQLKSF K E I G R K 0 1 0 0 0 0 2 3 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 815.41373 P62081 P62081 50 57 RPS7 40S ribosomal protein S7 yes yes 2 0.021104 98.418 By MS/MS 8.5 0.5 1 1 2 9014700 9014700 0 3357 1138 3478 7838;7839 6470 6470 1 175740 0 EIEVGGGRK DLKAQLRELNITAAKEIEVGGGRKAIIIFV NITAAKEIEVGGGRKAIIIFVPVPQLKSFQ K E I R K A 0 1 0 0 0 0 2 3 0 1 0 1 0 0 0 0 0 0 0 1 0 0 9 1 943.50869 P62081 P62081 50 58 RPS7 40S ribosomal protein S7 yes yes 2 0.0051854 111.65 By MS/MS 9 0 1 1 14985000 14985000 0 3358 1138 3479 7840 6471 6471 1 294910 0 EIEVPDQYGTIR DRKIILWDHDLNPEREIEVPDQYGTIRAVA PEREIEVPDQYGTIRAVAEGKADQFLVGTS R E I I R A 0 1 0 1 0 1 2 1 0 2 0 0 0 0 1 0 1 0 1 1 0 0 12 0 1418.7042 Q9HC35 Q9HC35 545 556 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.0012478 112.85 By MS/MS 1.5 0.5 1 1 2 471960 471960 0 3359 2510 3480 7841;7842 6472;6473 6473 2 130270 0 EIFAQEALAPFR ETDIEDFRLCVKLTREIFAQEALAPFRGKE LTREIFAQEALAPFRGKELQPGSHIQSDKE R E I F R G 3 1 0 0 0 1 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 0 12 0 1390.7245 Q8NE62 Q8NE62 471 482 CHDH Choline dehydrogenase, mitochondrial yes yes 2 0.00017613 152.04 By MS/MS 6 0 1 1 1190100 1190100 0 3360 1959 3481 7843 6474 6474 1 8180.7 0 EIFEQPESVVNTMR LQQIMKGNFSSFMQKEIFEQPESVVNTMRG KEIFEQPESVVNTMRGRVNFDDYTVNLGGL K E I M R G 0 1 1 0 0 1 3 0 0 1 0 0 1 1 1 1 1 0 0 2 0 0 14 0 1677.8032 Q06210 Q06210 346 359 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 6.2765E-11 262.11 By MS/MS 5 0 1 1 1835200 1835200 0 3361 1295 3482 7844 6475 6475 1 18406 0 EIFGLYGQTTGK NKIDRTDAISEEKLREIFGLYGQTTGKGNV KLREIFGLYGQTTGKGNVTLKELNARPMEV R E I G K G 0 0 0 0 0 1 1 3 0 1 1 1 0 1 0 0 2 0 1 0 0 0 12 0 1312.6663 Q9NR31 Q9NR31 149 160 SAR1A GTP-binding protein SAR1a yes yes 2 0.00012562 155.33 By MS/MS 9.5 0.5 1 1 2 4393900 4393900 0 3362 2546 3483 7845;7846 6476 6476 1 90328 0 EIFITFR GVEDGQTVRMPVGKREIFITFRVQKSPVFR VRMPVGKREIFITFRVQKSPVFRRDGADIH R E I F R V 0 1 0 0 0 0 1 0 0 2 0 0 0 2 0 0 1 0 0 0 0 0 7 0 924.5069 Q96EY1 Q96EY1 326 332 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.012635 128.57 By MS/MS 8 0.816 1 1 1 3 5191900 5191900 0 3363 2150 3484 7847;7848;7849 6477 6477 1 80840 0 EIFNFVLK CNFTKSMEEDPQTSREIFNFVLKAIRPQID EDPQTSREIFNFVLKAIRPQIDLKRYAVPS R E I L K A 0 0 1 0 0 0 1 0 0 1 1 1 0 2 0 0 0 0 0 1 0 0 8 0 1008.5644 P78527 P78527 247 254 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.002762 135.87 By MS/MS 3 1.58 1 1 1 1 4 1515400 1515400 0 3364 1225 3485 7850;7851;7852;7853 6478;6479;6480;6481 6481 4 270170 0 EIFRNEK KVARVANPRLDTFSREIFRNEKLKKVVRLA PRLDTFSREIFRNEKLKKVVRLARVRDHYI R E I E K L 0 1 1 0 0 0 2 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 1 934.48723 O15160 O15160 286 292 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.039776 143.11 By MS/MS 7 0 1 1 1013800 1013800 0 3365 166 3486 7854 6482 6482 1 15915 0 EIGLLADEIEIYGK ISRGQTPKAVDVLAKEIGLLADEIEIYGKS KEIGLLADEIEIYGKSKAKVRLSVLERLKD K E I G K S 1 0 0 1 0 0 3 2 0 3 2 1 0 0 0 0 0 0 1 0 0 0 14 0 1561.8239 Q6UB35 Q6UB35 380 393 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 9.8632E-12 201.46 By MS/MS 5 0.816 1 1 1 3 347290 347290 0 3366 1728 3487 7855;7856;7857 6483;6484;6485 6483 3 2807.6 0 EIGLLSEEVELYGETK ISRSCKPKPIGKLAREIGLLSEEVELYGET IGLLSEEVELYGETKAKVLLSALERLKHRP R E I T K A 0 0 0 0 0 0 5 2 0 1 3 1 0 0 0 1 1 0 1 1 0 0 16 0 1807.9091 P11586 P11586 337 352 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.5762E-16 253.42 By MS/MS 4 0 1 1 160110 160110 0 3367 582 3488 7858 6486;6487 6486 2 15068 0 EIGNIISDAMK EEIAQVATISANGDKEIGNIISDAMKKVGR NGDKEIGNIISDAMKKVGRKGVITVKDGKT K E I M K K 1 0 1 1 0 0 1 1 0 3 0 1 1 0 0 1 0 0 0 0 0 0 11 0 1189.6013 P10809 P10809 181 191 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.00024536 139.15 By MS/MS 5.5 0.5 2 2 4 8245100 8245100 0 3368 569 3489;3490 7859;7860;7861;7862 6488;6489 6489 247 2 58214 0 EIIDLVLDR DAANNYARGHYTIGKEIIDLVLDRIRKLAD HYTIGKEIIDLVLDRIRKLADQCTGLQGFL K E I D R I 0 1 0 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1084.6128 P68363;Q71U36;Q9BQE3 Q9BQE3 113 121 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 5.2584E-07 190.73 By MS/MS 5.27 2.42 1 1 1 1 1 2 2 1 1 11 206450000 206450000 0 3369 1210;1751;2290 3491 7863;7864;7865;7866;7867;7868;7869;7870;7871;7872;7873 6490;6491;6492;6493;6494;6495;6496;6497;6498;6499;6500;6501;6502;6503;6504;6505;6506;6507 6497 18 1567400 0 EIIDLVLDRIR DAANNYARGHYTIGKEIIDLVLDRIRKLAD TIGKEIIDLVLDRIRKLADQCTGLQGFLVF K E I I R K 0 2 0 2 0 0 1 0 0 3 2 0 0 0 0 0 0 0 0 1 0 0 11 1 1353.798 P68363;Q71U36;Q9BQE3 Q9BQE3 113 123 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 9.9895E-05 134.77 By MS/MS 6 0 1 1 2193300 2193300 0 3370 1210;1751;2290 3492 7874 6508 6508 1 15077 0 EIIQDVTLHDLDVANAR EEYVPLPKGDVHKKKEIIQDVTLHDLDVAN IQDVTLHDLDVANARPQGGQDILSMMGQLM K E I A R P 2 1 1 3 0 1 1 0 1 2 2 0 0 0 0 0 1 0 0 2 0 0 17 0 1920.9905 Q9Y265 Q9Y265 233 249 RUVBL1 RuvB-like 1 yes yes 2;3 4.0097E-24 261.45 By MS/MS 6 0 2 2 12498000 12498000 0 3371 2815 3493 7875;7876 6509;6510 6510 2 85912 0 EIISFGSGYGGNSLLGK CNPEKTLIGHVPDQREIISFGSGYGGNSLL ISFGSGYGGNSLLGKKCFALRIASRLARDE R E I G K K 0 0 1 0 0 0 1 5 0 2 2 1 0 1 0 3 0 0 1 0 0 0 17 0 1697.8625 Q16822;P35558 Q16822 245 261 PCK2;PCK1 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial;Phosphoenolpyruvate carboxykinase, cytosolic [GTP] yes no 2 4.9789E-09 225.72 By MS/MS 5 0 1 1 715020 715020 0 3372 1560 3494 7877 6511 6511 1 7171.3 0 EIISNLAK PLLIDEDYYARVEGREIISNLAKAAGLATM YARVEGREIISNLAKAAGLATMISTMRPDI R E I A K A 1 0 1 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 8 0 886.51238 O75533 O75533 595 602 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.027798 90.986 By MS/MS 3 0 1 1 2060700 2060700 0 3373 332 3495 7878 6512 6512 1 37705 0 EIKDFFEVAK LTKNYMDYLSRLYEREIKDFFEVAKIKMTG RLYEREIKDFFEVAKIKMTGTTKESKKFAT R E I A K I 1 0 0 1 0 0 2 0 0 1 0 2 0 2 0 0 0 0 0 1 0 0 10 1 1224.639 Q9NV70 Q9NV70 421 430 EXOC1 Exocyst complex component 1 yes yes 2 0.0052705 122.33 By MS/MS 4 0 1 1 1120100 1120100 0 3374 2589 3496 7879 6513 6513 1 105400 0 EIKDILIQYDR LVAYYQKYVDEASKKEIKDILIQYDRTLLV ASKKEIKDILIQYDRTLLVADPRRCESKKF K E I D R T 0 1 0 2 0 1 1 0 0 3 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1404.7613 P62249 P62249 107 117 RPS16 40S ribosomal protein S16 yes yes 2;3 2.1949E-12 252.14 By MS/MS 9.6 0.49 2 3 5 33391000 33391000 0 3375 1145 3497 7880;7881;7882;7883;7884 6514;6515;6516;6517;6518 6516 5 1757300 0 EILAELTGR YRAHGFTFTRGLSVREILAELTGRKGGCAK RGLSVREILAELTGRKGGCAKGKGGSMHMY R E I G R K 1 1 0 0 0 0 2 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1000.5553 P08559 P08559 133 141 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 7.6897E-05 166.52 By MS/MS 8.33 1.25 1 1 1 3 10089000 10089000 0 3376 524 3498 7885;7886;7887 6519;6520;6521 6519 3 160640 0 EILDESLR DQLIKELPELLQRNREILDESLRLLDEEEA ELLQRNREILDESLRLLDEEEATDNDLRAK R E I L R L 0 1 0 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 973.50803 Q8WUM4 Q8WUM4 449 456 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.017181 102.77 By MS/MS 7 0 1 1 2176900 2176900 0 3377 2018 3499 7888 6522 6522 1 34174 0 EILDKKVEK EESKAKFENLCKLMKEILDKKVEKVTISNR LCKLMKEILDKKVEKVTISNRLVSSPCCIV K E I E K V 0 0 0 1 0 0 2 0 0 1 1 3 0 0 0 0 0 0 0 1 0 0 9 2 1100.6441 P08238;Q58FF7 P08238 569 577 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 6.713E-05 179.37 By MS/MS 4 0 1 1 2375000 2375000 0 3378 521 3500 7889 6523 6523 1 223500 0 EILEFPAR LQVKLYPDSRVRPTREILEFPARDVYVPNT SRVRPTREILEFPARDVYVPNTTYRNLLYI R E I A R D 1 1 0 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 8 0 973.52328 Q96N67;Q96HP0 Q96N67 544 551 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 0.015747 104.37 By MS/MS 2.5 1.12 1 1 1 1 4 2101700 2101700 0 3379 2201;2166 3501 7890;7891;7892;7893 6524 6524 1 502110 0 EILETLIK GIFAYLNYHVPRTRREILETLIKGLQRLEY HVPRTRREILETLIKGLQRLEYRGYDSAGV R E I I K G 0 0 0 0 0 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 8 0 957.57465 Q06210 Q06210 18 25 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.018199 101.64 By MS/MS 5 0 1 1 3066100 3066100 0 3380 1295 3502 7894 6525 6525 1 30752 0 EILGTAQSVGCNVDGR MRHRSLARELSGTIKEILGTAQSVGCNVDG ILGTAQSVGCNVDGRHPHDIIDDINSGAVE K E I G R H 1 1 1 1 1 1 1 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1674.7995 P30050 P30050 131 146 RPL12 60S ribosomal protein L12 yes yes 2 0.00047561 157.09 By MS/MS 9 0 1 1 972310 972310 0 3381 766 3503 7895 6526 6526 1 19135 0 EILSELGK RFAGKVTTASVKERREILSELGKCVAGKDL ASVKERREILSELGKCVAGKDLPEGAVKGL R E I G K C 0 0 0 0 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 887.4964 Q92616 Q92616 28 35 GCN1L1 Translational activator GCN1 yes yes 2 0.031438 89.55 By MS/MS 2.5 0.5 1 1 2 1712400 1712400 0 3382 2064 3504 7896;7897 6527 6527 1 436450 0 EILSEVER KDPKACTILLRGASKEILSEVERNLQDAMQ LLRGASKEILSEVERNLQDAMQVCRNVLLD K E I E R N 0 1 0 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 973.50803 P49368 P49368 382 389 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0068256 117.04 By MS/MS 7.5 2.06 1 1 1 1 4 49015000 49015000 0 3383 947 3505 7898;7899;7900;7901 6528;6529;6530;6531 6530 4 428920 0 EILVEESNVQR LIKESEVKALCAKAREILVEESNVQRVDSP AKAREILVEESNVQRVDSPVTVCGDIHGQF R E I Q R V 0 1 1 0 0 1 3 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 11 0 1314.6779 P60510 P60510 34 44 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 2 1.6257E-06 192.64 By MS/MS 8 0 1 1 560870 560870 0 3384 1092 3506 7902 6532 6532 1 7080.9 0 EIPVESIEEVSK PGIEVLWTGPKVVSKEIPVESIEEVSKIIK VSKEIPVESIEEVSKIIKRAPVIWDNIHAN K E I S K I 0 0 0 0 0 0 4 0 0 2 0 1 0 0 1 2 0 0 0 2 0 0 12 0 1357.6977 O60502 O60502 258 269 MGEA5 Protein O-GlcNAcase yes yes 2 0.012609 89.171 By MS/MS 3.5 0.5 1 1 2 2370700 2370700 0 3385 260 3507 7903;7904 6533 6533 1 83095 0 EIQEPDPTYEEK EMEEIFDDASPGKQKEIQEPDPTYEEKMQT KQKEIQEPDPTYEEKMQTDRANRFEYLLKQ K E I E K M 0 0 0 1 0 1 4 0 0 1 0 1 0 0 2 0 1 0 1 0 0 0 12 0 1476.662 O60264 O60264 72 83 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.00079385 129 By MS/MS 3 0 1 1 384820 384820 0 3386 251 3508 7905 6534 6534 1 7041.1 0 EIQGFLDCAAR ACWKQNEFRDDACRKEIQGFLDCAARAQEA ACRKEIQGFLDCAARAQEARKMRSIQETLG K E I A R A 2 1 0 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 11 0 1278.6027 Q96BP2 Q96BP2 69 79 CHCHD1 Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 yes yes 2 0.0014771 113.22 By MS/MS 10 0 1 1 441150 441150 0 3387 2116 3509 7906 6535 6535 1 23777 0 EIQNASHR VVSCPLKADSKAVIREIQNASHRVVMITGD DSKAVIREIQNASHRVVMITGDNPLTACHV R E I H R V 1 1 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 8 0 953.46789 Q9HD20 Q9HD20 735 742 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0027177 136.27 By MS/MS 2 0.816 1 1 1 3 279400 279400 0 3388 2517 3510 7907;7908;7909 6536;6537 6536 2 63008 0 EIQPCLAESR EDLKVQLEHVQTRLREIQPCLAESRAAREK QTRLREIQPCLAESRAAREKESFNLKRAQE R E I S R A 1 1 0 0 1 1 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1201.5761 O75150 O75150 886 895 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 8.6476E-05 154.85 By MS/MS 3 0 1 1 368950 368950 0 3389 297 3511 7910 6538 6538 1 6750.7 0 EIQQALVDAGDKPATFVGSR FKHQGYTERSIPTHREIQQALVDAGDKPAT LVDAGDKPATFVGSRQWIGSIEVQLVLNQL R E I S R Q 3 1 0 2 0 2 1 2 0 1 1 1 0 1 1 1 1 0 0 2 0 0 20 1 2101.0804 Q9NUQ7 Q9NUQ7 329 348 UFSP2 Ufm1-specific protease 2 yes yes 3 0.0008863 96.096 By MS/MS 6.5 0.5 1 1 2 10543000 10543000 0 3390 2585 3512 7911;7912 6539 6539 1 82082 0 EIQTAVR SRLAHYNKRSTITSREIQTAVRLLLPGELA KRSTITSREIQTAVRLLLPGELAKHAVSEG R E I V R L 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 815.45012 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q96A08 Q99880 94 100 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-A yes no 2 0.027749 106.42 By MS/MS By matching 9.25 0.829 1 1 2 1 3 5710000 5468100 241840 3391 279 3513 7913;7914;7915;7916 6540 6540 1 294710 331990 EIQTTTGNQQVLVR YLACRDVEKGELVAKEIQTTTGNQQVLVRK KEIQTTTGNQQVLVRKLDLSDTKSIRAFAK K E I V R K 0 1 1 0 0 3 1 1 0 1 1 0 0 0 0 0 3 0 0 2 0 0 14 0 1585.8424 Q8TC12 Q8TC12 84 97 RDH11 Retinol dehydrogenase 11 yes yes 2;3 1.9471E-16 278.35 By MS/MS By MS/MS 8.33 0.943 1 3 1 1 5 1 24060000 23898000 162080 3392 1988 3514 7917;7918;7919;7920;7921;7922 6541;6542;6543;6544 6542 4 324680 218720 EIQVQHPAAK MGGIVMTNDGNAILREIQVQHPAAKSMIEI NAILREIQVQHPAAKSMIEISRTQDEEVGD R E I A K S 2 0 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 10 0 1119.6037 P49368 P49368 69 78 CCT3 T-complex protein 1 subunit gamma yes yes 2 2.0684E-08 199.89 By MS/MS By MS/MS 5.5 0.5 2 2 2 2 37241000 37049000 192100 3393 947 3515 7923;7924;7925;7926 6545;6546;6547;6548 6545 4 310460 190100 EIRPTYAGSK SKYAELLAIIEELGKEIRPTYAGSKSAMER EELGKEIRPTYAGSKSAMERLKRGIIHARG K E I S K S 1 1 0 0 0 0 1 1 0 1 0 1 0 0 1 1 1 0 1 0 0 0 10 1 1120.5877 O14519;O75956 O14519 76 85 CDK2AP1;CDK2AP2 Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 yes no 2 0.020603 107.45 By MS/MS 10 0 1 1 327290 327290 0 3394 122 3516 7927 6549 6549 1 17640 0 EISEGDEVEVYSR PFNEVRLPPPPDIKKEISEGDEVEVYSRAN KKEISEGDEVEVYSRANDQEPCGWWLAKVR K E I S R A 0 1 0 1 0 0 4 1 0 1 0 0 0 0 0 2 0 0 1 2 0 0 13 0 1510.6787 P51114 P51114 58 70 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 2 2.1748E-11 229.82 By MS/MS 5 0 1 1 1316400 1316400 0 3395 987 3517 7928 6550;6551 6550 2 13203 0 EISGHTSGIKK LLRIYDLNKPEAEPKEISGHTSGIKKALWC AEPKEISGHTSGIKKALWCSEDKQILSADD K E I K K A 0 0 0 0 0 0 1 2 1 2 0 2 0 0 0 2 1 0 0 0 0 0 11 1 1155.6248 Q9Y3F4 Q9Y3F4 138 148 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 0.00019962 152.06 By MS/MS 7 0 2 2 3155000 3155000 0 3396 2877 3518 7929;7930 6552;6553 6553 2 49529 0 EISLLKELR RLESEEEGVPSTAIREISLLKELRHPNIVS PSTAIREISLLKELRHPNIVSLQDVLMQDS R E I L R H 0 1 0 0 0 0 2 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 1 1099.6601 P06493 P06493 51 59 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.0091439 123.21 By MS/MS 8 0 1 1 715170 715170 0 3397 496 3519 7931 6554 6554 1 9029 0 EISLLPDNLLR FLRQELPVRLANIMKEISLLPDNLLRTPSV NIMKEISLLPDNLLRTPSVQLVQSWYIQSL K E I L R T 0 1 1 1 0 0 1 0 0 1 4 0 0 0 1 1 0 0 0 0 0 0 11 0 1281.7293 Q15118 Q15118 93 103 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.026422 82.287 By MS/MS 7 0 1 1 328420 328420 0 3398 1489 3520 7932 6555 6555 1 5155.7 0 EISYENTQISR SSNNVRISMINNPAKEISYENTQISRAIWA NPAKEISYENTQISRAIWAALQTQTSNAAK K E I S R A 0 1 1 0 0 1 2 0 0 2 0 0 0 0 0 2 1 0 1 0 0 0 11 0 1338.6416 Q9NYU2 Q9NYU2 802 812 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 1.1505E-06 188.91 By MS/MS 3 0 1 1 736330 736330 0 3399 2638 3521 7933 6556 6556 1 13473 0 EITALAPSTMK GGTTMYPGIADRMQKEITALAPSTMKIKII RMQKEITALAPSTMKIKIIAPPERKYSVWI K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P60709;P63267;P68133;P68032;P62736;P63261 P63261 316 326 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0035347 107.79 By MS/MS By MS/MS 5 2.4 1 1 1 1 4 2 6 17375000 16915000 460340 3400 1095;1203 3522;3523 7934;7935;7936;7937;7938;7939;7940;7941 6557;6558;6559;6560 6560 616 4 265540 568900 EITGIGPSTTTETETIAK VRIKIQHMELQLIKKEITGIGPSTTTETET GIGPSTTTETETIAKYEIMDGAPVKGESIP K E I A K Y 1 0 0 0 0 0 3 2 0 3 0 1 0 0 1 1 6 0 0 0 0 0 18 0 1847.9364 O75436 O75436 215 232 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.00018723 173.59 By MS/MS 7 0 1 1 3228200 3228200 0 3401 328 3524 7942 6561 6561 1 50677 0 EITKPLRPLGK PILQEGGVPMGELFREITKPLRPLGKAASL ELFREITKPLRPLGKAASLLLEILGLLCKS R E I G K A 0 1 0 0 0 0 1 1 0 1 2 2 0 0 2 0 1 0 0 0 0 0 11 2 1250.7711 Q04637 Q04637 1361 1371 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0018622 134.77 By MS/MS 2 0 1 1 1388000 1388000 0 3402 1291 3525 7943 6562 6562 1 469490 0 EITTCLPDYYK RKQLDRLGLCFSWDREITTCLPDYYKWTQY SWDREITTCLPDYYKWTQYLFIKLYEAGLA R E I Y K W 0 0 0 1 1 0 1 0 0 1 1 1 0 0 1 0 2 0 2 0 0 0 11 0 1401.6486 Q15031 Q15031 173 183 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0066005 99.688 By MS/MS 4 0 1 1 883290 883290 0 3403 1477 3526 7944 6563 6563 1 83124 0 EIVHLQAGQCGNQIGAK ______________________________ VHLQAGQCGNQIGAKFWEVISDEHGIDPTG R E I A K F 2 0 1 0 1 3 1 3 1 2 1 1 0 0 0 0 0 0 0 1 0 0 17 0 1821.9156 P04350;P68371 P68371 3 19 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain no no 2;3 3.8458E-44 378.97 By MS/MS 7.67 1.49 2 1 1 1 1 6 74983000 74983000 0 3404 1212;472 3527 7945;7946;7947;7948;7949;7950 6564;6565;6566;6567;6568 6565 5 544850 0 EIVLADVIDNDSWR LVDMKIEFGVDVTTKEIVLADVIDNDSWRL KEIVLADVIDNDSWRLWPSGDRSQQKDKQS K E I W R L 1 1 1 3 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 2 0 0 14 0 1643.8155 P22234 P22234 202 215 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 4.1267E-11 234.79 By MS/MS 7 0.816 1 1 1 3 615820 615820 0 3405 689 3528 7951;7952;7953 6569;6570 6570 2 6840.8 0 EIVRDIKEK ILTERGYSFTTTAEREIVRDIKEKLCYVAL TTTAEREIVRDIKEKLCYVALDFEQEMATA R E I E K L 0 1 0 1 0 0 2 0 0 2 0 2 0 0 0 0 0 0 0 1 0 0 9 2 1128.6503 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261 P63261 207 215 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 9.9367E-05 175.91 By MS/MS By matching 7 0 4 2 2 9570900 9402400 168550 3406 1095;1203 3529 7954;7955;7956;7957 6571;6572 6572 2 147600 303560 EIVREQGLK TSPNPKYRGFFHGVREIVREQGLKGTYQGL FFHGVREIVREQGLKGTYQGLTATVLKQGS R E I L K G 0 1 0 0 0 1 2 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1070.6084 P53007 P53007 170 178 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0054291 132.76 By MS/MS 8 0 1 1 4569400 4569400 0 3407 1026 3530 7958 6573 6573 1 57688 0 EIVTNFLAGFEA RADGKISEQSDAKLKEIVTNFLAGFEA___ KLKEIVTNFLAGFEA_______________ K E I E A - 2 0 1 0 0 0 2 1 0 1 1 0 0 2 0 0 1 0 0 1 0 0 12 0 1309.6554 P25705 P25705 542 553 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 4.2618E-05 169.76 By MS/MS By MS/MS 6 0 2 1 1 411400 367180 44225 3408 723 3531 7959;7960 6574;6575;6576 6576 3 2524.1 45318 EIVVIHQDPEALK VIRDRKTIPIKYPLKEIVVIHQDPEALKDI LKEIVVIHQDPEALKDIKSLEKYIIEELNV K E I L K D 1 0 0 1 0 1 2 0 1 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1489.814 P41252 P41252 849 861 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.3671E-11 236.69 By MS/MS 3.5 0.5 1 1 2 1814100 1814100 0 3409 871 3532 7961;7962 6577 6577 1 49054 0 EIYNEKELLQGK DRHLVFPLLEFLSVKEIYNEKELLQGKLDL SVKEIYNEKELLQGKLDLLSDTNMVDFAMD K E I G K L 0 0 1 0 0 1 3 1 0 1 2 2 0 0 0 0 0 0 1 0 0 0 12 1 1462.7668 P60228 P60228 30 41 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 6.2897E-08 212.28 By MS/MS 6.5 0.5 1 1 2 11754000 11754000 0 3410 1090 3533 7963;7964 6578 6578 1 93441 0 EKAEEKER KQRAKEAQERELRKREKAEEKERRRKEYDA ERELRKREKAEEKERRRKEYDALKAAKREQ R E K E R R 1 1 0 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 8 2 1017.5091 Q96AG4 Q96AG4 191 198 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.00054928 154.12 By MS/MS 8 1 1 1 2 807740 807740 0 3411 2107 3534 7965;7966 6579;6580 6579 2 12972 0 EKALEHK EQQEEERITTMQLEREKALEHKNRMSRMLE ITTMQLEREKALEHKNRMSRMLEDRDLFVM R E K H K N 1 0 0 0 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 7 1 853.46577 Q14152 Q14152 741 747 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.018055 161.9 By MS/MS 3 0.707 1 2 1 4 1173000 1173000 0 3412 1422 3535 7967;7968;7969;7970 6581;6582 6581 2 73955 0 EKALEHKNR EQQEEERITTMQLEREKALEHKNRMSRMLE TMQLEREKALEHKNRMSRMLEDRDLFVMRL R E K N R M 1 1 1 0 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 9 2 1123.6098 Q14152 Q14152 741 749 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 5.6115E-06 176.44 By MS/MS 3.5 0.5 2 2 4 1053300 1053300 0 3413 1422 3536 7971;7972;7973;7974 6583;6584;6585 6583 3 28119 0 EKALQFLEEVK GLHPRIITEGFEAAKEKALQFLEEVKVSRE EAAKEKALQFLEEVKVSREMDRETLIDVAR K E K V K V 1 0 0 0 0 1 3 0 0 0 2 2 0 1 0 0 0 0 0 1 0 0 11 1 1332.7289 P40227 P40227 128 138 CCT6A T-complex protein 1 subunit zeta yes yes 2 3.647E-05 175.65 By MS/MS 6 0 1 1 945970 945970 0 3414 858 3537 7975 6586 6586 1 6502.8 0 EKAPSIIFIDELDAIGTK GDGAKLVRDAFALAKEKAPSIIFIDELDAI PSIIFIDELDAIGTKRFDSEKAGDREVQRT K E K T K R 2 0 0 2 0 0 2 1 0 4 1 2 0 1 1 1 1 0 0 0 0 0 18 1 1959.0565 P17980 P17980 277 294 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 0.00015466 154.81 By MS/MS 6 0 2 2 2936600 2936600 0 3415 647 3538 7976;7977 6587;6588 6587 2 20187 0 EKAVRDEAK LKPIIKVLPKLFESREKAVRDEAKLIAVEI KLFESREKAVRDEAKLIAVEIYRWIRDALR R E K A K L 2 1 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 2 1044.5564 Q14008 Q14008 177 185 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0037752 146.79 By MS/MS 2 0 1 1 97221 97221 0 3416 1417 3539 7978 6589 6589 1 32884 0 EKDFSPEALKK LKAYRLTPKLMEVCKEKDFSPEALKKANIT EVCKEKDFSPEALKKANITFEYMFEEVPIV K E K K K A 1 0 0 1 0 0 2 0 0 0 1 3 0 1 1 1 0 0 0 0 0 0 11 2 1290.682 O15372 O15372 179 189 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2;3 7.8488E-05 172.88 By MS/MS 7.33 0.471 2 1 3 7359000 7359000 0 3417 186 3540 7979;7980;7981 6590;6591 6590 2 114130 0 EKDILTAIAADLCK RLQQLEALRRMVQEREKDILTAIAADLCKS REKDILTAIAADLCKSEFNVYSQEVITVLG R E K C K S 3 0 0 2 1 0 1 0 0 2 2 2 0 0 0 0 1 0 0 0 0 0 14 1 1559.8229 P51648 P51648 38 51 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2;3 9.8709E-16 249.28 By MS/MS 6 0 2 2 6559000 6559000 0 3418 1002 3541 7982;7983 6592;6593 6592 2 45088 0 EKDIQEESTFSSR GGLLSPARLYAIAAKEKDIQEESTFSSRKI AKEKDIQEESTFSSRKISNQFDWALMRLDL K E K S R K 0 1 0 1 0 1 3 0 0 1 0 1 0 1 0 3 1 0 0 0 0 0 13 1 1554.7162 P42704 P42704 65 77 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 2.8683E-55 345.57 By MS/MS By MS/MS 6.11 2.42 4 2 2 2 2 2 2 2 16 2 34513000 34154000 358750 3419 886 3542 7984;7985;7986;7987;7988;7989;7990;7991;7992;7993;7994;7995;7996;7997;7998;7999;8000;8001 6594;6595;6596;6597;6598;6599;6600;6601;6602;6603;6604;6605;6606 6597 12 826540 45664 EKDIQEESTFSSRK GGLLSPARLYAIAAKEKDIQEESTFSSRKI KEKDIQEESTFSSRKISNQFDWALMRLDLS K E K R K I 0 1 0 1 0 1 3 0 0 1 0 2 0 1 0 3 1 0 0 0 0 0 14 2 1682.8111 P42704 P42704 65 78 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.033937 113.52 By MS/MS 3 0 1 1 3433600 3433600 0 3420 886 3543 8002 6607 6607 1 62826 0 EKDRDPEAQFEMPYVVR PISSSKLYNEVRACREKDRDPEAQFEMPYV DRDPEAQFEMPYVVRLHNFHQLSAPQPCFT R E K V R L 1 2 0 2 0 1 3 0 0 0 0 1 1 1 2 0 0 0 1 2 0 0 17 2 2107.9997 O14744 O14744 489 505 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.0035373 102.72 By MS/MS 5 0 1 1 1013500 1013500 0 3421 137 3544 8003 6608 6608 1 10165 0 EKEAEDGIIAYDDCGVK ATFSNPKTTSPNKGKEKEAEDGIIAYDDCG EAEDGIIAYDDCGVKLTIAFQAKDVEGSTS K E K V K L 2 0 0 3 1 0 3 2 0 2 0 2 0 0 0 0 0 0 1 1 0 0 17 1 1910.8568 O75534 O75534 451 467 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.014499 79.471 By MS/MS 4 0 1 1 1184200 1184200 0 3422 333 3545 8004 6609 6609 1 111440 0 EKEEADLLLEQQR EMEKRLQDLENQYRKEKEEADLLLEQQRLY RKEKEEADLLLEQQRLYADSDSGDDSDKRS K E K Q R L 1 1 0 1 0 2 4 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 13 1 1599.8104 O43896 O43896 657 669 KIF1C Kinesin-like protein KIF1C no no 2;3 1.157E-08 225.55 By MS/MS 3.33 0.471 2 1 3 1043300 1043300 0 3423 244 3546 8005;8006;8007 6610;6611 6611 2 46492 0 EKEEEEQR RKRQRKEERRITYYREKEEEEQRRAEEQML RRITYYREKEEEEQRRAEEQMLKEREERER R E K Q R R 0 1 0 0 0 1 5 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 1 1075.4782 Q14152 Q14152 809 816 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0048666 153.04 By MS/MS 2.5 0.5 1 1 2 230620 230620 0 3424 1422 3547 8008;8009 6612 6612 1 54784 0 EKEELEQR IEERKERLESLNIQREKEELEQREAELQKV ESLNIQREKEELEQREAELQKVRKAEEERL R E K Q R E 0 1 0 0 0 1 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1059.5197 Q14152 Q14152 590 597 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0015417 164.72 By MS/MS 2.5 0.5 1 1 2 1475600 1475600 0 3425 1422 3548 8010;8011 6613;6614 6613 2 346000 0 EKEELEQREAELQK IEERKERLESLNIQREKEELEQREAELQKV REKEELEQREAELQKVRKAEEERLRQEAKE R E K Q K V 1 1 0 0 0 2 6 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 14 2 1757.8796 Q14152 Q14152 590 603 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 5.1341E-32 295.34 By MS/MS By matching 3.33 0.943 1 3 1 1 4 2 31084000 30694000 389470 3426 1422 3549 8012;8013;8014;8015;8016;8017 6615;6616;6617 6616 3 824730 110830 EKEELIEEWQPEPLVPPVPK SKTYKLQERSDLTVKEKEELIEEWQPEPLV IEEWQPEPLVPPVPKDHPALNYNIVSGPPS K E K P K D 0 0 0 0 0 1 6 0 0 1 2 2 0 0 5 0 0 1 0 2 0 0 20 1 2385.2468 O15269 O15269 56 75 SPTLC1 Serine palmitoyltransferase 1 yes yes 3 1.7418E-05 164.2 By MS/MS 6 0 1 1 8058200 8058200 0 3427 177 3550 8018 6618 6618 1 55394 0 EKEIKSELK LSLMYARKGVAEQKREKEIKSELKMKQDAQ VAEQKREKEIKSELKMKQDAQVVLYRSYRH R E K L K M 0 0 0 0 0 0 3 0 0 1 1 3 0 0 0 1 0 0 0 0 0 0 9 2 1102.6234 P78527 P78527 2754 2762 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.048935 106.68 By MS/MS 1 0 1 1 60813 60813 0 3428 1225 3551 8019 6619 6619 1 14654 0 EKELEKEQEQER PEEIREREREKEREREKELEKEQEQEREKE REREKELEKEQEQEREKEREKDRERQQEKE R E K E R E 0 1 0 0 0 2 6 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 12 2 1573.7584 Q9Y520 Q9Y520 516 527 PRRC2C Protein PRRC2C yes yes 3 0.011349 88.803 By MS/MS 2 0 1 1 136630 136630 0 3429 2905 3552 8020 6620 6620 1 46215 0 EKEPVVVETVEEK VSGTPCREFWSRFRKEKEPVVVETVEEKKE RKEKEPVVVETVEEKKEPILVCPPLRSRAY K E K E K K 0 0 0 0 0 0 5 0 0 0 0 2 0 0 1 0 1 0 0 4 0 0 13 1 1513.7876 Q8N5N7 Q8N5N7 33 45 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2;3 0.0022331 129.34 By MS/MS 10 0 2 2 1144000 1144000 0 3430 1925 3553 8021;8022 6621;6622 6621 2 61657 0 EKFEEMIQQIK VTSVEDYKALQKYEKEKFEEMIQQIKETGA KYEKEKFEEMIQQIKETGANLAICQWGFDD K E K I K E 0 0 0 0 0 2 3 0 0 2 0 2 1 1 0 0 0 0 0 0 0 0 11 1 1421.7225 P48643 P48643 283 293 CCT5 T-complex protein 1 subunit epsilon yes yes 2 3.5458E-45 285.16 By MS/MS 6 0 1 1 0 0 0 3431 940 3554 8023 6623 6623 1 0 0 EKGSDSFKSEK NEKDKEKNKSKSSGKEKGSDSFKSEKMDKI SSGKEKGSDSFKSEKMDKISSGGKKESRHD K E K E K M 0 0 0 1 0 0 2 1 0 0 0 3 0 1 0 3 0 0 0 0 0 0 11 2 1240.5935 Q8NI27 Q8NI27 1539 1549 THOC2 THO complex subunit 2 yes yes 3 0.0095079 98.754 By MS/MS 5 0 1 1 238170 238170 0 3432 1971 3555 8024 6624 6624 0 2388.7 0 EKGSSASLVLKR IVSHPADSVVSVLNKEKGSSASLVLKRLGF LNKEKGSSASLVLKRLGFKGVWKGLFARII K E K K R L 1 1 0 0 0 0 1 1 0 0 2 2 0 0 0 3 0 0 0 1 0 0 12 2 1273.7354 Q00325 Q00325 294 305 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 3 0.0011799 112.84 By MS/MS 2 0.816 1 1 1 3 408100 408100 0 3433 1259 3556 8025;8026;8027 6625 6625 1 100730 0 EKHFQQQEQERQER EARSREEAERQRLEREKHFQQQEQERQERR REKHFQQQEQERQERRKRLEEIMKRTRKSE R E K E R R 0 2 0 0 0 5 4 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 14 2 1898.8983 Q3KQU3 Q3KQU3 695 708 MAP7D1 MAP7 domain-containing protein 1 yes yes 3 0.033014 72.958 By MS/MS 3 0 1 1 289750 289750 0 3434 1575 3557 8028 6626 6626 1 5301.6 0 EKLEATINELV FKKGQKVGEFSGANKEKLEATINELV____ GANKEKLEATINELV_______________ K E K L V - 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 11 1 1257.6816 P10599 P10599 95 105 TXN Thioredoxin yes yes 2 2.2281E-12 231.42 By MS/MS By matching 10 0 2 1 1 431810 402810 29002 3435 563 3558 8029;8030 6627 6627 1 21710 37131 EKLEEKIEPR KMKEQEKECELEKEREKLEEKIEPREPNLE LEKEREKLEEKIEPREPNLEPMVEKQESEN R E K P R E 0 1 0 0 0 0 4 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 10 2 1269.6929 Q9Y520 Q9Y520 594 603 PRRC2C Protein PRRC2C yes yes 2;3 0.027468 85.29 By MS/MS 1.75 0.829 2 1 1 4 1243500 1243500 0 3436 2905 3559 8031;8032;8033;8034 6628;6629 6629 2 327990 0 EKLPGELEPVQATQNK QKELAEQLGLSTGEKEKLPGELEPVQATQN KLPGELEPVQATQNKTGKYVPPSLRDGASR K E K N K T 1 0 1 0 0 2 3 1 0 0 2 2 0 0 2 0 1 0 0 1 0 0 16 1 1779.9367 O75821 O75821 194 209 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 2.3671E-32 292.12 By MS/MS 7.75 0.829 2 1 1 4 16819000 16819000 0 3437 348 3560 8035;8036;8037;8038 6630;6631;6632;6633;6634 6631 5 262630 0 EKNVQGIIEILK IRPHYFWPLLVGRRKEKNVQGIIEILKGMQ RRKEKNVQGIIEILKGMQELGVHPDQETYT K E K L K G 0 0 1 0 0 1 2 1 0 3 1 2 0 0 0 0 0 0 0 1 0 0 12 1 1382.8133 P42704 P42704 452 463 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0076383 115 By MS/MS 3.5 0.5 1 1 2 406260 406260 0 3438 886 3561 8039;8040 6635 6635 1 30651 0 EKQEEEEAKCLEK EEVACRKEEEERKAREKQEEEEAKCLEKFQ AREKQEEEEAKCLEKFQDADPLEQDELHTF R E K E K F 1 0 0 0 1 1 6 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 13 2 1648.7614 Q7Z6Z7 Q7Z6Z7 1412 1424 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.00035236 140.63 By MS/MS 2 0 1 1 348950 348950 0 3439 1802 3562 8041 6636 6636 1 118030 0 EKQLAAENR EEEMMAKEEELVKVREKQLAAENRLTEMET ELVKVREKQLAAENRLTEMETLQSQLMAEK R E K N R L 2 1 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1057.5516 P35579 P35579 859 867 MYH9 Myosin-9 yes yes 2 1.5581E-06 195.79 By MS/MS By matching 1.67 0.471 1 2 1 2 711430 539760 171680 3440 824 3563 8042;8043;8044 6637 6637 1 182570 178240 EKQLQELQQQQEEEERQR LFPEYILDPEPQPTREKQLQELQQQQEEEE LQELQQQQEEEERQRQQRREERRQQNLRAR R E K Q R Q 0 2 0 0 0 7 6 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 18 2 2355.1415 Q8NC60 Q8NC60 88 105 NOA1 Nitric oxide-associated protein 1 yes yes 3 0.020003 75.316 By MS/MS 5 0 1 1 879280 879280 0 3441 1949 3564 8045 6638 6638 1 8818.7 0 EKQPPIDNIIR NQLQATQAARKLLSREKQPPIDNIIRAGLI LLSREKQPPIDNIIRAGLIPKFVSFLGRTD R E K I R A 0 1 1 1 0 1 1 0 0 3 0 1 0 0 2 0 0 0 0 0 0 0 11 1 1321.7354 P52292 P52292 107 117 KPNA2 Importin subunit alpha-1 yes yes 2;3 0.00084527 132.32 By MS/MS By matching 6 0 3 2 1 11689000 11668000 21737 3442 1013 3565 8046;8047;8048 6639;6640 6640 2 80205 22275 EKRQEQIAK AEYAKLLAKRMKEAKEKRQEQIAKRRRLSS RMKEAKEKRQEQIAKRRRLSSLRASTSKSE K E K A K R 1 1 0 0 0 2 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1128.6251 P62753 P62753 222 230 RPS6 40S ribosomal protein S6 yes yes 2 0.019033 109.48 By MS/MS 8 0 1 1 2328900 2328900 0 3443 1169 3566 8049 6641 6641 1 29402 0 EKSPQMGANK RLMEEEKENQPADPKEKSPQMGANKKVKKE PADPKEKSPQMGANKKVKKEPPKKKQEDKK K E K N K K 1 0 1 0 0 1 1 1 0 0 0 2 1 0 1 1 0 0 0 0 0 0 10 1 1088.5284 Q9C093 Q9C093 1290 1299 SPEF2 Sperm flagellar protein 2 yes yes 2 0.050515 51.193 By MS/MS 10 0 1 1 36564 0 36564 3444 2387 3567 8050 6642 6642 1085 0 0 46812 EKTACAINK QDLSKILRTSSGSIREKTACAINKVLMGRV SSGSIREKTACAINKVLMGRVPDRGGRPNE R E K N K V 2 0 1 0 1 0 1 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 9 1 1033.5226 Q8NCA5;Q52LJ0 Q8NCA5 288 296 FAM98A;FAM98B Protein FAM98A;Protein FAM98B yes no 2 0.010214 120.46 By MS/MS 6.5 0.5 1 1 2 402030 402030 0 3445 1950 3568 8051;8052 6643 6643 1 4196.9 0 EKYEITEQR RKPRHQEGEIFDTEKEKYEITEQRKIDQKA IFDTEKEKYEITEQRKIDQKAVDSQILPKI K E K Q R K 0 1 0 0 0 1 3 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1194.5881 Q02878 Q02878 238 246 RPL6 60S ribosomal protein L6 yes yes 2 0.0083845 125.16 By MS/MS By matching 7 0 2 1 1 814160 774570 39599 3446 1281 3569 8053;8054 6644 6644 1 12159 71317 EKYIDQEELNK DDSGKDKKKKTKKIKEKYIDQEELNKTKPI KKIKEKYIDQEELNKTKPIWTRNPDDITQE K E K N K T 0 0 1 1 0 1 3 0 0 1 1 2 0 0 0 0 0 0 1 0 0 0 11 1 1407.6882 P07900;Q14568;P08238;Q58FF8 P08238 274 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2;3 5.6633E-45 357.06 By MS/MS 4 0 2 2 6855100 6855100 0 3447 521;513 3570 8055;8056 6645;6646;6647 6647 3 645110 0 ELAALLEAQK EERKFQQHILGQQKKELAALLEAQKRTYKL GQQKKELAALLEAQKRTYKLRKEQLKEELQ K E L Q K R 3 0 0 0 0 1 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1084.6128 Q9UL54 Q9UL54 575 584 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.0015125 113.71 By MS/MS 3 0 1 1 150580 150580 0 3448 2770 3571 8057 6648 6648 1 2755.3 0 ELAAQLNEEAK RNEMTAEEKRRAHQKELAAQLNEEAKRRLT AHQKELAAQLNEEAKRRLTEQKGEQQIQKA K E L A K R 3 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1214.6143 Q9Y5B9 Q9Y5B9 480 490 SUPT16H FACT complex subunit SPT16 yes yes 2 2.9969E-19 256.48 By MS/MS 2 0.816 1 1 1 3 1620600 1620600 0 3449 2909 3572 8058;8059;8060 6649;6650 6649 2 315450 0 ELAEDDSILK AEEKKKQDELKRIARELAEDDSILK_____ KRIARELAEDDSILK_______________ R E L L K - 1 0 0 2 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5659 P56385 P56385 60 69 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 7.3253E-08 195.32 By MS/MS By matching 10 0 4 3 1 19097000 18902000 194570 3450 1072 3573 8061;8062;8063;8064 6651;6652;6653;6654;6655 6655 5 1018800 249100 ELAEDGYSGVEVR ADGIFKAELNEFLTRELAEDGYSGVEVRVT TRELAEDGYSGVEVRVTPTRTEIIILATRT R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 P23396 P23396 28 40 RPS3 40S ribosomal protein S3 yes yes 2 2.2502E-28 267.39 By MS/MS By MS/MS 6.87 2.92 2 1 3 5 2 2 12 3 199650000 198170000 1488800 3451 703 3574 8065;8066;8067;8068;8069;8070;8071;8072;8073;8074;8075;8076;8077;8078;8079 6656;6657;6658;6659;6660;6661;6662;6663;6664;6665;6666;6667;6668;6669;6670;6671;6672;6673 6659 17 3406300 2009000 ELAEQLGLSTGEK TTRCPYKDTLGPMQKELAEQLGLSTGEKEK QKELAEQLGLSTGEKEKLPGELEPVQATQN K E L E K E 1 0 0 0 0 1 3 2 0 0 3 1 0 0 0 1 1 0 0 0 0 0 13 0 1373.7038 O75821 O75821 181 193 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 1.5236E-18 257.09 By MS/MS By MS/MS 7.33 0.943 1 3 1 1 5 1 69856000 69511000 345640 3452 348 3575 8080;8081;8082;8083;8084;8085 6674;6675;6676;6677;6678;6679 6677 6 1066000 622480 ELAEQLGLSTGEKEK TTRCPYKDTLGPMQKELAEQLGLSTGEKEK ELAEQLGLSTGEKEKLPGELEPVQATQNKT K E L E K L 1 0 0 0 0 1 4 2 0 0 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1630.8414 O75821 O75821 181 195 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 5.6545E-32 295.29 By MS/MS By matching 7.33 0.471 2 1 2 1 11790000 11732000 58690 3453 348 3576 8086;8087;8088 6680;6681 6680 2 181380 105700 ELAEQTLNNIK FLPNAPKALIVEPSRELAEQTLNNIKQFKK EPSRELAEQTLNNIKQFKKYIDNPKLRELL R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 Q92499 Q92499 297 307 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 3.5835E-09 210.64 By MS/MS 5 0.816 1 1 1 3 7249800 7249800 0 3454 2046 3577 8089;8090;8091 6682;6683 6682 2 213380 0 ELAESDFASTFR GVYVFGELLDMPNVRELAESDFASTFRLLT NVRELAESDFASTFRLLTVFAYGTYADYLA R E L F R L 2 1 0 1 0 0 2 0 0 0 1 0 0 2 0 2 1 0 0 0 0 0 12 0 1371.6307 Q9UBW8 Q9UBW8 54 65 COPS7A COP9 signalosome complex subunit 7a yes yes 2 6.2082E-05 163.66 By MS/MS 8 0 1 1 2190800 2190800 0 3455 2708 3578 8092 6684 6684 1 27659 0 ELAFATEQDPPDAK TPVEVAIEDMQKKTRELAFATEQDPPDAKM RELAFATEQDPPDAKMLQMVLQGSVGPTVN R E L A K M 3 0 0 2 0 1 2 0 0 0 1 1 0 1 2 0 1 0 0 0 0 0 14 0 1530.7202 Q96HP0 Q96HP0 1915 1928 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 4.2959E-11 234.24 By MS/MS 2.5 0.5 1 1 2 1129500 1129500 0 3456 2166 3579 8093;8094 6685 6685 1 312790 0 ELAICTVGR QALFVALNDQVFEIRELAICTVGRLSSMNP QVFEIRELAICTVGRLSSMNPAFVMPFLRK R E L G R L 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1017.5277 P42345 P42345 709 717 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0015156 127.46 By MS/MS 2.5 0.5 1 1 2 1032500 1032500 0 3457 879 3580 8095;8096 6686 6686 1 276190 0 ELALALQEALEPAVR AGRRRRAPPGGCEERELALALQEALEPAVR ELALALQEALEPAVRLGRYPRAQLEVSALL R E L V R L 4 1 0 0 0 1 3 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 15 0 1621.9039 Q5RKV6 Q5RKV6 121 135 EXOSC6 Exosome complex component MTR3 yes yes 2 0.0005968 131.06 By MS/MS 8 0 1 1 112420 112420 0 3458 1617 3581 8097 6687 6687 1 1419.3 0 ELALNTAQFAK RKLHAVVETLVNHRKELALNTAQFAKSLAM NHRKELALNTAQFAKSLAMLGSSEDNTALS K E L A K S 3 0 1 0 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1204.6452 Q13596 Q13596 339 349 SNX1 Sorting nexin-1 yes yes 2 0.046469 74.165 By MS/MS 5 0 1 1 708840 708840 0 3459 1401 3582 8098 6688 6688 0 7109.3 0 ELALPGELTQSR FNDKSNTHEFVNLVKELALPGELTQSRSYD LVKELALPGELTQSRSYDFEFMQVEKPYES K E L S R S 1 1 0 0 0 1 2 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1312.6987 O75436 O75436 94 105 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 3.4925E-06 192.44 By MS/MS 8 0.816 1 1 1 3 3724500 3724500 0 3460 328 3583 8099;8100;8101 6689 6689 1 58167 0 ELAMPGEDLK LTWDMACRIILPPEKELAMPGEDLKFNLIL LPPEKELAMPGEDLKFNLILRQPMILEKGQ K E L L K F 1 0 0 1 0 0 2 1 0 0 2 1 1 0 1 0 0 0 0 0 0 0 10 0 1101.5376 P49411 P49411 396 405 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.0030634 109.71 By MS/MS 7.33 0.471 2 1 3 2372500 2372500 0 3461 949 3584;3585 8102;8103;8104 6690;6691 6690 522 2 36912 0 ELAPLFEELR ASSSANTGLIVSLEKELAPLFEELRQVVEV VSLEKELAPLFEELRQVVEVS_________ K E L L R Q 1 1 0 0 0 0 3 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 10 0 1215.6499 Q9UHA4 Q9UHA4 109 118 LAMTOR3 Ragulator complex protein LAMTOR3 yes yes 2 0.0023249 111.61 By MS/MS 10 0 1 1 119480 119480 0 3462 2727 3586 8105 6692 6692 1 6439.4 0 ELAPLQELIEK HFIFFVQEFNLIDRRELAPLQELIEKLGSK IDRRELAPLQELIEKLGSKDR_________ R E L E K L 1 0 0 0 0 1 3 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1281.718 Q9H8S9;Q7L9L4 Q9H8S9 200 210 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 2 3.8123E-07 198.61 By MS/MS 8.5 0.5 1 1 2 1651000 1651000 0 3463 1772 3587 8106;8107 6693;6694 6693 2 26999 0 ELAPYDENWFYTR KVPEWVDTVKLAKHKELAPYDENWFYTRAA HKELAPYDENWFYTRAASTARHLYLRGGAG K E L T R A 1 1 1 1 0 0 2 0 0 0 1 0 0 1 1 0 1 1 2 0 0 0 13 0 1702.7627 P39019 P39019 44 56 RPS19 40S ribosomal protein S19 yes yes 2 9.3641E-05 174.23 By MS/MS 10 0 1 1 764910 764910 0 3464 853 3588 8108 6695 6695 1 41226 0 ELAQQIEEETIK ESDQGPYAIILAPTRELAQQIEEETIKFGK PTRELAQQIEEETIKFGKPLGIRTVAVIGG R E L I K F 1 0 0 0 0 2 4 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 12 0 1429.73 Q9BUQ8 Q9BUQ8 479 490 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 4.2424E-05 169.82 By MS/MS 4.5 0.5 1 1 2 2771200 2771200 0 3465 2326 3589 8109;8110 6696 6696 1 224240 0 ELAQQIQK LDLKATQALVLAPTRELAQQIQKVVMALGD LVLAPTRELAQQIQKVVMALGDYMGASCHA R E L Q K V 1 0 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 956.5291 P60842;Q14240 P60842 111 118 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.0056E-21 252.58 By MS/MS By MS/MS 5.36 2.74 2 1 1 1 1 3 2 1 1 1 11 3 649000000 648720000 277820 3466 1097 3590 8111;8112;8113;8114;8115;8116;8117;8118;8119;8120;8121;8122;8123;8124 6697;6698;6699;6700;6701;6702;6703;6704;6705;6706;6707;6708;6709;6710;6711;6712;6713;6714;6715 6712 19 12730000 309120 ELAQQVQQVAAEYCR ERGDGPICLVLAPTRELAQQVQQVAAEYCR ELAQQVQQVAAEYCRACRLKSTCIYGGAPK R E L C R A 3 1 0 0 1 4 2 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 15 0 1791.8574 P17844 P17844 178 192 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 8.7861E-08 222.81 By MS/MS 5 0 1 1 3440300 3440300 0 3467 646 3591 8125 6716 6716 1 34504 0 ELAQQVQQVADDYGK ERGDGPICLVLAPTRELAQQVQQVADDYGK ELAQQVQQVADDYGKCSRLKSTCIYGGAPK R E L G K C 2 0 0 2 0 4 1 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 15 0 1690.8162 Q92841 Q92841 255 269 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 6.6447E-24 281.32 By MS/MS 5 0 1 1 4444900 4444900 0 3468 2073 3592 8126 6717 6717 1 44580 0 ELAQTTR SGLEEAVYRNIQACKELAQTTRTAYGPNGM YRNIQACKELAQTTRTAYGPNGMNKMVINH K E L T R T 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 7 0 817.42938 P50990 P50990 38 44 CCT8 T-complex protein 1 subunit theta yes yes 2 0.034145 101.6 By MS/MS 6.5 1.12 1 1 1 1 4 20237000 20237000 0 3469 984 3593 8127;8128;8129;8130 6718 6718 1 158720 0 ELATVLSDQPGLLGPK SMHRERRKFLRSALKELATVLSDQPGLLGP LATVLSDQPGLLGPKALFVFMALSFARDEI K E L P K A 1 0 0 1 0 1 1 2 0 0 4 1 0 0 2 1 1 0 0 1 0 0 16 0 1636.9036 Q9Y2A7 Q9Y2A7 352 367 NCKAP1 Nck-associated protein 1 yes yes 2 7.8848E-17 262.11 By MS/MS 4 0 1 1 678840 678840 0 3470 2824 3594 8131 6719 6719 1 63883 0 ELAVQIYEEAR RRKQYPISLVLAPTRELAVQIYEEARKFSY APTRELAVQIYEEARKFSYRSRVRPCVVYG R E L A R K 2 1 0 0 0 1 3 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1319.6721 O00571;O15523 O00571 277 287 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 2.5745E-10 224.75 By MS/MS By MS/MS 4 1.73 1 3 3 1 17218000 17110000 108060 3471 116 3595 8132;8133;8134;8135 6720;6721;6722 6722 2 202680 90749 ELAVQIYEEARK RRKQYPISLVLAPTRELAVQIYEEARKFSY PTRELAVQIYEEARKFSYRSRVRPCVVYGG R E L R K F 2 1 0 0 0 1 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 12 1 1447.7671 O00571;O15523 O00571 277 288 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 6.3284E-09 223.87 By MS/MS 5 0 1 1 10883000 10883000 0 3472 116 3596 8136 6723 6723 1 109150 0 ELCGTPGYLAPEILK DFGFSCHLEPGEKLRELCGTPGYLAPEILK ELCGTPGYLAPEILKCSMDETHPGYGKEVD R E L L K C 1 0 0 0 1 0 2 2 0 1 3 1 0 0 2 0 1 0 1 0 0 0 15 0 1659.8542 P15735 P15735 186 200 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 2 0.00119 119.74 By MS/MS 7 0 1 1 594380 594380 0 3473 626 3597 8137 6724 6724 1 9330.7 0 ELCQGLGQPGSVLR ELQISNNRLEDAGVRELCQGLGQPGSVLRV RELCQGLGQPGSVLRVLWLADCDVSDSSCS R E L L R V 0 1 0 0 1 2 1 3 0 0 3 0 0 0 1 1 0 0 0 1 0 0 14 0 1512.7719 P13489 P13489 360 373 RNH1 Ribonuclease inhibitor yes yes 2 6.8328E-05 181.98 By MS/MS 7.5 0.5 1 1 2 15135000 15135000 0 3474 601 3598 8138;8139 6725;6726 6726 2 233550 0 ELDAEGLEAVQQTVGSR HRGRNVLTAILLLLRELDAEGLEAVQQTVG DAEGLEAVQQTVGSRLQALRGEEVQEHAE_ R E L S R L 2 1 0 1 0 2 3 2 0 0 2 0 0 0 0 1 1 0 0 2 0 0 17 0 1800.8854 O43822 O43822 226 242 C21orf2 Protein C21orf2 yes yes 2 2.4136E-53 295.29 By MS/MS 8 0 1 1 0 0 0 3475 239 3599 8140 6727 6727 1 0 0 ELDALDANDELTPLGR PPPLDAVIEAEHTLRELDALDANDELTPLG LDALDANDELTPLGRILAKLPIEPRFGKMM R E L G R I 2 1 1 3 0 0 2 1 0 0 4 0 0 0 1 0 1 0 0 0 0 0 16 0 1740.853 Q08211 Q08211 838 853 DHX9 ATP-dependent RNA helicase A yes yes 2 5.3071E-07 249.98 By MS/MS 3.43 1.59 1 1 2 1 1 1 7 2621300 2621300 0 3476 1307 3600 8141;8142;8143;8144;8145;8146;8147 6728;6729;6730;6731;6732 6728 5 221920 0 ELDALLEQQNTIESK AVYERLCGEEKVVERELDALLEQQNTIESK ELDALLEQQNTIESKMVTLHRMGPNLQLIE R E L S K M 1 0 1 1 0 2 3 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 15 0 1729.8734 Q9H9E3 Q9H9E3 59 73 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 3.8617E-24 286.34 By MS/MS 4 0 1 1 1116200 1116200 0 3477 2486 3601 8148 6733 6733 1 105040 0 ELDDATEANEGLSR EEATRANASRRKLQRELDDATEANEGLSRE RELDDATEANEGLSREVSTLKNRLRRGGPI R E L S R E 2 1 1 2 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1518.6798 P35580 P35580 1906 1919 MYH10 Myosin-10 yes yes 2 7.3112E-24 312.95 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 1613700 1530600 83014 3478 825 3602 8149;8150;8151 6734;6735 6735 2 454810 117400 ELDIMEPK MSNVQLNSNFLALARELDIMEPKVPDDIYK NFLALARELDIMEPKVPDDIYKTHLENNRF R E L P K V 0 0 0 1 0 0 2 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 8 0 973.47903 Q13200 Q13200 336 343 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.015747 104.37 By MS/MS 4 0 1 1 1083700 1083700 0 3479 1365 3603 8152 6736 6736 1 101990 0 ELDLASLR GPEPGVSGVGELIVRELDLASLRSVRAFCQ VGELIVRELDLASLRSVRAFCQEMLQEEPR R E L L R S 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 915.50255 Q9HBH5 Q9HBH5 113 120 RDH14 Retinol dehydrogenase 14 yes yes 2 0.017415 101.28 By MS/MS 8 0 1 1 2560500 2560500 0 3480 2505 3604 8153 6737 6737 1 32326 0 ELDMEPYTVAGVAK RECAIKFNDYFEFPRELDMEPYTVAGVAKL RELDMEPYTVAGVAKLEGDNVNPESQLIQQ R E L A K L 2 0 0 1 0 0 2 1 0 0 1 1 1 0 1 0 1 0 1 2 0 0 14 0 1521.7385 Q93008 Q93008 1821 1834 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 7.3524E-13 248.09 By MS/MS 2.4 1.02 1 2 1 1 5 1538800 1538800 0 3481 2085 3605;3606 8154;8155;8156;8157;8158 6738;6739;6740 6739 1004 3 432370 0 ELDPILTEVTLMNAR NNLMRNSTTEKIEPRELDPILTEVTLMNAR ELDPILTEVTLMNARSELYLRFLKKRISSD R E L A R S 1 1 1 1 0 0 2 0 0 1 3 0 1 0 1 0 2 0 0 1 0 0 15 0 1713.8971 Q9H9E3 Q9H9E3 351 365 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 3.4243E-07 213.63 By MS/MS 4.75 0.829 2 1 1 4 420120 420120 0 3482 2486 3607;3608 8159;8160;8161;8162 6741;6742;6743;6744;6745 6742 1103 4 27096 0 ELDRNELFEK FNLETEWKNNYPRLRELDRNELFEKAKNEI YPRLRELDRNELFEKAKNEILDEVISLSQV R E L E K A 0 1 1 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 10 1 1291.6408 O60313 O60313 587 596 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.032443 102.06 By MS/MS By matching 3.5 0.5 1 1 1 1 1431200 704380 726840 3483 254 3609 8163;8164 6746 6746 1 66287 92516 ELDSITPEVLPGWK QYHELVVQARDDFKRELDSITPEVLPGWKG RELDSITPEVLPGWKGMSVSDLADKLSTDD R E L W K G 0 0 0 1 0 0 2 1 0 1 2 1 0 0 2 1 1 1 0 1 0 0 14 0 1582.8243 Q16891 Q16891 372 385 IMMT MICOS complex subunit MIC60 yes yes 2 0.00023959 171.92 By MS/MS 4 0 1 1 712540 712540 0 3484 1563 3610 8165 6747 6747 1 67055 0 ELDTVTLEDIKEHVK ADGKTAAAAAEHSQRELDTVTLEDIKEHVK ELDTVTLEDIKEHVKQLEKAVSGKEPRFVL R E L V K Q 0 0 0 2 0 0 3 0 1 1 2 2 0 0 0 0 2 0 0 2 0 0 15 1 1767.9254 O43242 O43242 66 80 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00035369 171.67 By MS/MS 6 0 1 1 1663100 1663100 0 3485 198 3611 8166 6748 6748 1 11432 0 ELEAASAPEER EKDKADDDVFEKKQKELEAASAPEERTRLH KKQKELEAASAPEERTRLHDELEEAKDKAR K E L E R T 3 1 0 0 0 0 4 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1200.5622 O43432 O43432 861 871 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 2.1875E-13 240.13 By MS/MS 2 0 1 1 1480000 1480000 0 3486 210 3612 8167 6749 6749 1 500580 0 ELEAEER GVVPGSLWPSPEQLRELEAEEREWYPSLAT WPSPEQLRELEAEEREWYPSLATMQESLRV R E L E R E 1 1 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 874.40323 Q8TAE8 Q8TAE8 84 90 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.039458 97.602 By MS/MS 9 0 1 1 1196400 1196400 0 3487 1974 3613 8168 6750 6750 1 23546 0 ELEAELEDERKQR EQNEEKKRLLIKQVRELEAELEDERKQRAL VRELEAELEDERKQRALAVASKKKMEIDLK R E L Q R A 1 2 0 1 0 1 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 13 2 1643.8115 P35580 P35580 1600 1612 MYH10 Myosin-10 yes yes 3 0.032132 74.962 By MS/MS 2.5 0.5 1 1 2 1315300 1315300 0 3488 825 3614 8169;8170 6751 6751 1 412640 0 ELEAFSILQK WFCGNVNEQNVLSERELEAFSILQKSGKPI VLSERELEAFSILQKSGKPILEGAALDEAL R E L Q K S 1 0 0 0 0 1 2 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1176.639 Q68CZ6 Q68CZ6 57 66 HAUS3 HAUS augmin-like complex subunit 3 yes yes 2 2.1049E-05 167.23 By MS/MS 5 0 1 1 364360 364360 0 3489 1672 3615 8171 6752 6752 1 3654.4 0 ELEANVLATAPDK QRLIEQEEYLNVQVKELEANVLATAPDKKK VKELEANVLATAPDKKKQKLLEENVSAFKT K E L D K K 3 0 1 1 0 0 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1369.7089 Q9NTJ3 Q9NTJ3 841 853 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 4.2619E-17 272.1 By MS/MS 3 0 1 1 632450 632450 0 3490 2575 3616 8172 6753 6753 1 11572 0 ELEASEELDTICPK LYVSGELIGGLDIIKELEASEELDTICPKA KELEASEELDTICPKAPKLEERLKVLTNKA K E L P K A 1 0 0 1 1 0 4 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 14 0 1632.7553 O76003 O76003 218 231 GLRX3 Glutaredoxin-3 yes yes 2 1.9992E-24 289.22 By MS/MS 7 0 1 1 1494500 1494500 0 3491 358 3617 8173 6754 6754 1 23460 0 ELEDATETADAMNR EEAQRANASRRKLQRELEDATETADAMNRE RELEDATETADAMNREVSSLKNKLRRGDLP R E L N R E 3 1 1 2 0 0 3 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 14 0 1564.6675 P35579 P35579 1899 1912 MYH9 Myosin-9 yes yes 2 1.7239E-43 321.23 By MS/MS By matching 2.2 0.4 4 1 3 2 1481300 1406600 74722 3492 824 3618;3619 8174;8175;8176;8177;8178 6755;6756 6755 409 2 414870 105670 ELEDEILR DSLVINIAAGKRKLKELEDEILRLLNEATG AGKRKLKELEDEILRLLNEATGSLLDDVQL K E L L R L 0 1 0 1 0 0 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1015.5186 Q9P225 Q9P225 3550 3557 DNAH2 Dynein heavy chain 2, axonemal yes yes 2 0.021955 97.473 By MS/MS 8 0 1 1 7532600 7532600 0 3493 2675 3620 8179 6757 6757 1 95099 0 ELEDYIDNLLVR LKQKETISKKEFQVRELEDYIDNLLVRVME QVRELEDYIDNLLVRVMEETPNILRIPTQV R E L V R V 0 1 1 2 0 0 2 0 0 1 3 0 0 0 0 0 0 0 1 1 0 0 12 0 1490.7617 Q6WKZ4;Q7L804 Q6WKZ4 1250 1261 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 no no 2 1.9761E-06 197.21 By MS/MS 5 0.816 1 1 1 3 349350 349350 0 3494 1735;1769 3621 8180;8181;8182 6758;6759 6759 2 6653.6 0 ELEEIVQPIISK SHQDADIEDFKAKKKELEEIVQPIISKLYG KKKELEEIVQPIISKLYGSAGPPPTGEEDT K E L S K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 1 0 0 0 1 0 0 12 0 1396.7813 P11021 P11021 622 633 HSPA5 78 kDa glucose-regulated protein yes yes 2 2.8164E-13 211.64 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 18645000 18515000 130080 3495 571 3622 8183;8184;8185 6760;6761 6760 2 182960 109240 ELEELSLEAQGIK KEKKKQDFDEDDILKELEELSLEAQGIKAD LKELEELSLEAQGIKADRETVAVKPTENNE K E L I K A 1 0 0 0 0 1 4 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1457.7613 O60841 O60841 61 73 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 6.9443E-08 217.02 By MS/MS 2.5 0.5 1 1 2 184250 184250 0 3496 283 3623 8186;8187 6762;6763 6763 2 3371.3 0 ELEEQVVSVVNK SLDQEYDSESSQQWRELEEQVVSVVNKGVI QWRELEEQVVSVVNKGVIPSNFHPTQYCLN R E L N K G 0 0 1 0 0 1 3 0 0 0 1 1 0 0 0 1 0 0 0 4 0 0 12 0 1371.7246 Q9Y2L5 Q9Y2L5 712 723 TRAPPC8 Trafficking protein particle complex subunit 8 yes yes 2 5.4453E-18 259.08 By MS/MS 1.5 0.5 1 1 2 319620 319620 0 3497 2835 3624 8188;8189 6764 6764 1 86352 0 ELEFYLR PGQCGRADGYVLEGKELEFYLRKIKARKGK DGYVLEGKELEFYLRKIKARKGK_______ K E L L R K 0 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 7 0 968.49673 P62241 P62241 194 200 RPS8 40S ribosomal protein S8 yes yes 2 0.022174 110.61 By MS/MS By matching 9 0.816 1 1 1 2 1 2241000 2160000 81001 3498 1143 3625 8190;8191;8192 6765 6765 1 56942 109310 ELEFYLRK PGQCGRADGYVLEGKELEFYLRKIKARKGK GYVLEGKELEFYLRKIKARKGK________ K E L R K I 0 1 0 0 0 0 2 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 8 1 1096.5917 P62241 P62241 194 201 RPS8 40S ribosomal protein S8 yes yes 2 0.04478 107.32 By MS/MS 9 0.816 1 1 1 3 13282000 13282000 0 3499 1143 3626 8193;8194;8195 6766 6766 1 178640 0 ELEIEERER RVKKLEEVERKKRQRELEIEERERRREEER RKKRQRELEIEERERRREEERRLGDSSLSR R E L E R R 0 2 0 0 0 0 5 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1201.5939 Q14152 Q14152 862 870 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.3096E-06 196.99 By MS/MS 3 0.816 1 1 1 3 8772200 8772200 0 3500 1422 3627 8196;8197;8198 6767;6768 6767 2 432350 0 ELEKVCNPIITK KNQTAEKEEFEHQQKELEKVCNPIITKLYQ QQKELEKVCNPIITKLYQSAGGMPGGMPGG K E L T K L 0 0 1 0 1 0 2 0 0 2 1 2 0 0 1 0 1 0 0 1 0 0 12 1 1442.7803 P11142 P11142 598 609 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.6978E-08 222.18 By MS/MS 5 0 1 1 4586800 4586800 0 3501 572 3628 8199 6769 6769 1 46004 0 ELELDELALR EHKIQTNRYTVKVQRELELDELALRALKED VKVQRELELDELALRALKEDRKRFLCKAVE R E L L R A 1 1 0 1 0 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1199.6398 Q13315 Q13315 2444 2453 ATM Serine-protein kinase ATM yes yes 2 0.00033505 147.29 By MS/MS 1 0 1 1 77281 77281 0 3502 1370 3629 8200 6770;6771 6770 2 18622 0 ELELEVINLQK SQLQPIQYQYQDNIKELELEVINLQKEKEE DNIKELELEVINLQKEKEELVLELQTAKKD K E L Q K E 0 0 1 0 0 1 3 0 0 1 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1326.7395 O95239 O95239 563 573 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 4.8245E-13 230.24 By MS/MS 3 0 1 1 133440 133440 0 3503 397 3630 8201 6772 6772 1 2441.7 0 ELELKVPLVVR VNCAIIANGITKACRELELKVPLVVRLEGT KACRELELKVPLVVRLEGTNVQEAQKILNN R E L V R L 0 1 0 0 0 0 2 0 0 0 3 1 0 0 1 0 0 0 0 3 0 0 11 1 1293.802 Q96I99 Q96I99 382 392 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 3 0.018959 84.817 By MS/MS 7 0 1 1 327040 327040 0 3504 2172 3631 8202 6773 6773 1 5134 0 ELELQILTEAIR FKNLSAQCQEVRKRKELELQILTEAIRNWE KRKELELQILTEAIRNWEGDDIKTLGNVTY K E L I R N 1 1 0 0 0 1 3 0 0 2 3 0 0 0 0 0 1 0 0 0 0 0 12 0 1426.8031 Q14155 Q14155 456 467 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 3.2195E-06 193.3 By MS/MS 5 0 1 1 45730 45730 0 3505 1423 3632 8203 6774 6774 1 458.65 0 ELEPITTSQALQIAGR FYSLIKPSINEKGERELEPITTSQALQIAG LEPITTSQALQIAGRAGRFSSRFKEGEVTT R E L G R A 2 1 0 0 0 2 2 1 0 2 2 0 0 0 1 1 2 0 0 0 0 0 16 0 1725.9261 Q8IYB8 Q8IYB8 455 470 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 9.1046E-44 322.7 By MS/MS 5 0 1 1 3098300 3098300 0 3506 1885 3633 8204 6775 6775 1 31074 0 ELEQIFCQFDSK PHRGRLNVLANVIRKELEQIFCQFDSKLEA IRKELEQIFCQFDSKLEAADEGSGDVKYHL K E L S K L 0 0 0 1 1 2 2 0 0 1 1 1 0 2 0 1 0 0 0 0 0 0 12 0 1542.7024 Q02218 Q02218 325 336 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 5.2105E-09 220.29 By MS/MS 4.5 0.5 1 1 2 316360 316360 0 3507 1275 3634 8205;8206 6776 6776 1 26198 0 ELESVCVVEAGPGTCTFDHR LHCTPGDGQRFGHSRELESVCVVEAGPGTC CVVEAGPGTCTFDHRHLYTKKVTEDALIRT R E L H R H 1 1 0 1 2 0 3 2 1 0 1 0 0 1 1 1 2 0 0 3 0 0 20 0 2262.0045 Q6L8Q7 Q6L8Q7 263 282 PDE12 2,5-phosphodiesterase 12 yes yes 3 0.00048208 106.82 By MS/MS 5.5 0.5 1 1 2 3354100 3354100 0 3508 1686 3635 8207;8208 6777 6777 1 31398 0 ELEVLLMCNK MLPSGFRKFLVHNVKELEVLLMCNKSYCAE VHNVKELEVLLMCNKSYCAEIAHNVSSKNR K E L N K S 0 0 1 0 1 0 2 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 10 0 1247.6254 P62910 P62910 84 93 RPL32 60S ribosomal protein L32 yes yes 2 2.673E-27 275.71 By MS/MS 9 0 2 2 669340 669340 0 3509 1185 3636;3637 8209;8210 6778;6779 6779 686 2 13173 0 ELEVQHPAAK LEKLFVTNDAATILRELEVQHPAAKMIVMA ATILRELEVQHPAAKMIVMASHMQEQEVGD R E L A K M 2 0 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1120.5877 P50990 P50990 75 84 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00028257 141.52 By MS/MS 6.5 1.12 1 1 1 1 4 32584000 32584000 0 3510 984 3638 8211;8212;8213;8214 6780;6781;6782 6781 3 238640 0 ELFEDLLR FVGVVLSSELPEDDRELFEDLLRQMSDLRL ELPEDDRELFEDLLRQMSDLRLQANWNRAE R E L L R Q 0 1 0 1 0 0 2 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 1033.5444 Q8N0X7 Q8N0X7 321 328 SPG20 Spartin yes yes 2 0.021839 97.602 By MS/MS 4.5 0.5 1 1 2 150340 150340 0 3511 1897 3639 8215;8216 6783 6783 1 6921.8 0 ELFGKDEQQR VPEPYYPESGWDRLRELFGKDEQQRISKDL WDRLRELFGKDEQQRISKDLANICKTAATA R E L Q R I 0 1 0 1 0 2 2 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 10 1 1248.6099 Q9NPL8 Q9NPL8 60 69 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 0.0065527 117.31 By MS/MS 8 0 1 1 1557600 1557600 0 3512 2534 3640 8217 6784 6784 1 19664 0 ELFPVLQK PGCSDLGPLIPQFLRELFPVLQKRLCHPCW LIPQFLRELFPVLQKRLCHPCWEVRDSALE R E L Q K R 0 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 8 0 972.56442 Q6PJG6 Q6PJG6 500 507 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.010369 110.34 By MS/MS 5 0 1 1 214720 214720 0 3513 1720 3641 8218 6785 6785 1 2153.5 0 ELFSNLQEFAGPSGK RFTVIYNEQMASKKRELFSNLQEFAGPSGK ELFSNLQEFAGPSGKLSLLEVGCGTGANFK R E L G K L 1 0 1 0 0 1 2 2 0 0 2 1 0 2 1 2 0 0 0 0 0 0 15 0 1622.794 Q9H8H3 Q9H8H3 57 71 METTL7A Methyltransferase-like protein 7A yes yes 2 0.01401 87.831 By MS/MS 8.5 0.5 1 1 2 329590 329590 0 3514 2476 3642 8219;8220 6786 6786 1 5573.7 0 ELFVMAR ELVQKFIGEGARMVRELFVMAREHAPSIIF GEGARMVRELFVMAREHAPSIIFMDEIDSI R E L A R E 1 1 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 7 0 864.45276 P62195 P62195 233 239 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.032313 102.98 By MS/MS 7 0 1 1 1065600 1065600 0 3515 1142 3643 8221 6787 6787 1 16728 0 ELGENLDQILR FVGRLVSTLISKAGRELGENLDQILRAILS KAGRELGENLDQILRAILSKMQQAETLSVM R E L L R A 0 1 1 1 0 1 2 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1298.683 Q96P70 Q96P70 777 787 IPO9 Importin-9 yes yes 2 2.1058E-05 162.88 By MS/MS 3.5 0.5 1 1 2 284030 284030 0 3516 2208 3644 8222;8223 6788;6789 6789 2 19495 0 ELGEYGLQAYTEVK AQSPFGGYKMSGSGRELGEYGLQAYTEVKT RELGEYGLQAYTEVKTVTVKVPQKNS____ R E L V K T 1 0 0 0 0 1 3 2 0 0 2 1 0 0 0 0 1 0 2 1 0 0 14 0 1598.7828 P05091 P05091 493 506 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 1.9956E-16 266.74 By MS/MS 6 0 1 1 4860700 4860700 0 3517 485 3645 8224 6790 6790 1 33413 0 ELGHGALAEK YATNEIGKVTGLNRRELGHGALAEKALYPV GLNRRELGHGALAEKALYPVIPRDFPFTIR R E L E K A 2 0 0 0 0 0 2 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1023.5349 Q8TCS8 Q8TCS8 447 456 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.010664 92.838 By MS/MS 5 0 1 1 1040600 1040600 0 3518 1992 3646 8225 6791 6791 1 10437 0 ELGICPDDAAVIPIK TNRTVQIAAVVDVIRELGICPDDAAVIPIK ELGICPDDAAVIPIKNNRFYTIEILKVE__ R E L I K N 2 0 0 2 1 0 1 1 0 3 1 1 0 0 2 0 0 0 0 1 0 0 15 0 1609.8385 P12273 P12273 119 133 PIP Prolactin-inducible protein yes yes 2 0.00057803 131.42 By MS/MS 9.5 0.5 1 1 2 438270 438270 0 3519 591 3647 8226;8227 6792;6793 6792 2 15242 0 ELGITALHIK YAAMLAAQDVAQRCKELGITALHIKLRATG AQRCKELGITALHIKLRATGGNRTKTPGPG K E L I K L 1 0 0 0 0 0 1 1 1 2 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1093.6495 P62263 P62263 87 96 RPS14 40S ribosomal protein S14 yes yes 2 9.9413E-05 153.08 By MS/MS 10 0 2 2 12844000 12844000 0 3520 1147 3648 8228;8229 6794;6795 6794 2 692230 0 ELGIWEPLAVK TWGVNGETGTLVDMKELGIWEPLAVKLQTY VDMKELGIWEPLAVKLQTYKTAVETAVLLL K E L V K L 1 0 0 0 0 0 2 1 0 1 2 1 0 0 1 0 0 1 0 1 0 0 11 0 1253.702 P49368 P49368 492 502 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.3475E-09 207.29 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 24500000 24500000 0 3521 947 3649 8230;8231;8232;8233;8234;8235 6796;6797;6798;6799;6800;6801;6802;6803;6804 6796 9 195360 0 ELGLPEELVSR PLKDFHKDEVRILGRELGLPEELVSRHPFP ILGRELGLPEELVSRHPFPGPGLAIRVICA R E L S R H 0 1 0 0 0 0 3 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 11 0 1240.6663 P49915 P49915 425 435 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.00015282 136.96 By MS/MS 5 0 1 1 553990 553990 0 3522 968 3650 8236 6805 6805 1 5556.3 0 ELGQSLAQEVK TRLLAVTGEQAQQARELGQSLAQEVKAATE QQARELGQSLAQEVKAATERLSLGSRDVAE R E L V K A 1 0 0 0 0 2 2 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1200.635 Q5JTZ9 Q5JTZ9 791 801 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 1.3552E-25 280.55 By MS/MS By matching 5.6 1.62 2 1 1 1 4 1 8394000 8343200 50847 3523 1613 3651 8237;8238;8239;8240;8241 6806;6807;6808 6806 3 641000 108340 ELGSECGIEFDEEK SVLVAASSDIGDPLRELGSECGIEFDEEKT RELGSECGIEFDEEKTAVIDHHNYDISDLG R E L E K T 0 0 0 1 1 0 5 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 14 0 1640.6876 P39656 P39656 140 153 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 4.9672E-05 187.85 By MS/MS 6.5 0.5 1 1 2 5026200 5026200 0 3524 855 3652 8242;8243 6809 6809 1 42113 0 ELGSLPLPLSTSEQR HSTNQLAKETNELLKELGSLPLPLSTSEQR ELGSLPLPLSTSEQRQQRLQKERLMNDFSA K E L Q R Q 0 1 0 0 0 1 2 1 0 0 4 0 0 0 2 3 1 0 0 0 0 0 15 0 1625.8625 Q86Y82 Q86Y82 83 97 STX12 Syntaxin-12 yes yes 2 0.0005364 161.93 By MS/MS 7 0 1 1 1046200 1046200 0 3525 1851 3653 8244 6810 6810 1 16424 0 ELGSSPSGPLNIQR ELLPSSLQSRLYSNRELGSSPSGPLNIQRI RELGSSPSGPLNIQRIDNFSVVSYLLNPSY R E L Q R I 0 1 1 0 0 1 1 2 0 1 2 0 0 0 2 3 0 0 0 0 0 0 14 0 1453.7525 Q5SWA1 Q5SWA1 199 212 PPP1R15B Protein phosphatase 1 regulatory subunit 15B yes yes 2 0.00065476 131.42 By MS/MS 4.5 0.5 1 1 2 1045600 1045600 0 3526 1624 3654 8245;8246 6811 6811 1 74033 0 ELGSSVALYSR FYVPDMKPSMFDVSRELGSSVALYSRKVLI DVSRELGSSVALYSRKVLIQTKATDILPKW R E L S R K 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 3 0 0 1 1 0 0 11 0 1180.6088 Q12931 Q12931 358 368 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00033501 134.84 By MS/MS By matching 5 0 2 1 1 10538000 10435000 102650 3527 1340 3655 8247;8248 6812 6812 1 104660 86204 ELHAQAQER VRRHLGSPMSDVVSRELHAQAQERLQHYFM SDVVSRELHAQAQERLQHYFMGRALEERAQ R E L E R L 2 1 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1080.5312 Q15051 Q15051 481 489 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.051009 66.299 By MS/MS 5 0 1 1 342750 342750 0 3528 1482 3656 8249 6813 6813 1 3437.6 0 ELHINLIPNKQDR RYESLTDPSKLDSGKELHINLIPNKQDRTL GKELHINLIPNKQDRTLTIVDTGIGMTKAD K E L D R T 0 1 2 1 0 1 1 0 1 2 2 1 0 0 1 0 0 0 0 0 0 0 13 1 1588.8685 P07900 P07900 75 87 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.028364 88.101 By MS/MS 4.5 0.5 1 1 2 3423500 3423500 0 3529 513 3657 8250;8251 6814 6814 1 286170 0 ELHNTPYGTASEPSEK YGNEDQAEFLCVVSKELHNTPYGTASEPSE LHNTPYGTASEPSEKAKILQERGSRM____ K E L E K A 1 0 1 0 0 0 3 1 1 0 1 1 0 0 2 2 2 0 1 0 0 0 16 0 1758.8061 Q9NXV2 Q9NXV2 208 223 KCTD5 BTB/POZ domain-containing protein KCTD5 yes yes 3 0.051892 94.339 By MS/MS 9 0.816 1 1 1 3 1508700 1508700 0 3530 2629 3658 8252;8253;8254 6815 6815 1 24520 0 ELHQLQNEK NQMRDLQLQCEANVRELHQLQNEKCHLLVE CEANVRELHQLQNEKCHLLVEHETQKLKEL R E L E K C 0 0 1 0 0 2 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1137.5778 Q9H2G2 Q9H2G2 1144 1152 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0011886 131.62 By MS/MS 2 0 1 1 455280 455280 0 3531 2429 3659 8255 6816 6816 1 153990 0 ELIDHSPK VRGDGPWYYYETIDKELIDHSPKATPDN__ YYETIDKELIDHSPKATPDN__________ K E L P K A 0 0 0 1 0 0 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 0 8 0 937.4869 O43674 O43674 177 184 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 0.0051944 124.59 By MS/MS 9.5 0.5 1 1 2 920550 920550 0 3532 223 3660 8256;8257 6817 6817 1 36919 0 ELIDYLR TKSFGASGGYIGGKKELIDYLRTHSHSAVY GGYIGGKKELIDYLRTHSHSAVYATSLSPP K E L L R T 0 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 7 0 920.49673 O15270 O15270 393 399 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.016696 118.01 By MS/MS 5.5 0.5 1 1 2 2022200 2022200 0 3533 178 3661 8258;8259 6818 6818 1 14106 0 ELIEEFGQPK DIMVRTEHAFQLIQKELIEEFGQPKSGDAA QLIQKELIEEFGQPKSGDAAAAADASPSLN K E L P K S 0 0 0 0 0 1 3 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 10 0 1188.6027 Q3B7T1 Q3B7T1 1124 1133 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 1.2321E-05 172.94 By MS/MS 3 0 1 1 349080 349080 0 3534 1574 3662 8260 6819 6819 1 6387.1 0 ELIEELIAK TQQEGEEREKPKSRKELIEELIAKSKQEKR KPKSRKELIEELIAKSKQEKRERQAQREDA K E L A K S 1 0 0 0 0 0 3 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1056.6067 P78316 P78316 191 199 NOP14 Nucleolar protein 14 yes yes 2 0.014027 93.374 By MS/MS 4 0 1 1 290810 290810 0 3535 1217 3663 8261 6820 6820 1 27368 0 ELIEIISGAAALD LTLTFNRTRQAVITKELIEIISGAAALD__ TKELIEIISGAAALD_______________ K E L L D - 3 0 0 1 0 0 2 1 0 3 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1313.7078 P36542 P36542 286 298 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.00096749 117.01 By MS/MS 8 0 1 1 489890 489890 0 3536 835 3664 8262 6821 6821 1 6184.8 0 ELIEPVLTCFNDADSR ACSIALGKDSGLYLKELIEPVLTCFNDADS LIEPVLTCFNDADSRLRYYACEALYNIVKV K E L S R L 1 1 1 2 1 0 2 0 0 1 2 0 0 1 1 1 1 0 0 1 0 0 16 0 1877.8829 Q08AM6 Q08AM6 93 108 VAC14 Protein VAC14 homolog yes yes 2 5.8213E-11 234.04 By MS/MS 5 0.816 1 1 1 3 1177800 1177800 0 3537 1316 3665 8263;8264;8265 6822 6822 1 82448 0 ELIIGDR IKAVDSLVPIGRGQRELIIGDRQTGKTSIA VPIGRGQRELIIGDRQTGKTSIAIDTIINQ R E L D R Q 0 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.45487 P25705 P25705 208 214 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.042447 95.352 By MS/MS 6 0 1 1 59323000 59323000 0 3538 723 3666 8266 6823 6823 1 407800 0 ELIIGDRQTGK IKAVDSLVPIGRGQRELIIGDRQTGKTSIA RGQRELIIGDRQTGKTSIAIDTIINQKRFN R E L G K T 0 1 0 1 0 1 1 2 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1228.6776 P25705 P25705 208 218 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 5.8218E-13 232.72 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 30165000 29936000 229460 3539 723 3667 8267;8268;8269;8270 6824;6825;6826;6827 6825 4 218580 235130 ELILFSNSDNER GQTTTYLTYNDFINKELILFSNSDNERSIP INKELILFSNSDNERSIPSMVDGLKPGQRK K E L E R S 0 1 2 1 0 0 2 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 12 0 1435.6943 Q02880;P11388 P11388 702 713 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2-alpha no no 2 5.3877E-13 248.98 By MS/MS 2.5 1.12 1 1 1 1 4 1193900 1193900 0 3540 578;1282 3668 8271;8272;8273;8274 6828;6829 6829 2 142790 0 ELIRDEGVTSLYK APPGKYPNGFRDVLRELIRDEGVTSLYKGF LRELIRDEGVTSLYKGFNAVMIRAFPANAA R E L Y K G 0 1 0 1 0 0 2 1 0 1 2 1 0 0 0 1 1 0 1 1 0 0 13 1 1521.8039 O43772 O43772 255 267 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.023266 123.67 By MS/MS 8 0 1 1 6568400 6568400 0 3541 234 3669 8275 6830 6830 0 82926 0 ELISDNQYR LDDEEDQGIYQSKVRELISDNQYRLIVNVN YQSKVRELISDNQYRLIVNVNDLRRKNEKR R E L Y R L 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1136.5462 P25205 P25205 38 46 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.00085683 135.83 By MS/MS 4 0 1 1 1938100 1938100 0 3542 719 3670 8276 6831;6832 6832 2 182390 0 ELISNASDALDK LIINTFYSNKEIFLRELISNASDALDKIRY FLRELISNASDALDKIRYESLTDPSKLDSG R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;P14625 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 1.9547E-13 243.91 By MS/MS By MS/MS 5.55 2.68 1 1 2 2 1 1 1 1 1 9 2 33218000 32979000 238320 3543 521;615 3671 8277;8278;8279;8280;8281;8282;8283;8284;8285;8286;8287 6833;6834;6835;6836;6837;6838;6839;6840;6841 6833 8 2804200 476190 ELISNASDALDKIR LIINTFYSNKEIFLRELISNASDALDKIRY RELISNASDALDKIRYESLTDPSKLDSGKE R E L I R Y 2 1 1 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 14 1 1543.8206 P08238;P14625 P08238 42 55 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2;3 0.00014937 171.62 By MS/MS 4.8 0.748 2 2 1 5 26084000 26084000 0 3544 521;615 3672 8288;8289;8290;8291;8292 6842;6843 6842 2 2196300 0 ELISNASDALEK IVARSLYSEKEVFIRELISNASDALEKLRH FIRELISNASDALEKLRHKLVSDGQALPEM R E L E K L 2 0 1 1 0 0 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1288.6511 Q12931 Q12931 115 126 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.029062 82.749 By MS/MS 5 0 1 1 3713800 3713800 0 3545 1340 3673 8293 6844 6844 0 37247 0 ELISNASDALEKLR IVARSLYSEKEVFIRELISNASDALEKLRH RELISNASDALEKLRHKLVSDGQALPEMEI R E L L R H 2 1 1 1 0 0 2 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 14 1 1557.8362 Q12931 Q12931 115 128 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 1.1797E-06 213.84 By MS/MS 5 0 1 1 645450 645450 0 3546 1340 3674 8294 6845 6845 1 6473.6 0 ELISNSSDALDK LIINTFYSNKEIFLRELISNSSDALDKIRY FLRELISNSSDALDKIRYESLTDPSKLDSG R E L D K I 1 0 1 2 0 0 1 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1290.6303 P07900;Q14568 P07900 47 58 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 2 5.8415E-05 172.88 By MS/MS By MS/MS 5.75 2.49 2 1 1 3 1 13732000 13593000 139050 3547 513 3675 8295;8296;8297;8298 6846;6847;6848;6849;6850 6850 5 1232600 296270 ELISNSSDALDKIR LIINTFYSNKEIFLRELISNSSDALDKIRY RELISNSSDALDKIRYESLTDPSKLDSGKE R E L I R Y 1 1 1 2 0 0 1 0 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1559.8155 P07900 P07900 47 60 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.002395 158.86 By MS/MS 4 0 1 1 9414400 9414400 0 3548 513 3676 8299 6851 6851 1 885960 0 ELIVGEIFVR DKTYGSEFVYSDHAKELIVGEIFVRVYNEV SDHAKELIVGEIFVRVYNEVPTFQLEVPKA K E L V R V 0 1 0 0 0 0 2 1 0 2 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1173.6758 O75165 O75165 1685 1694 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 2.9363E-05 161.79 By MS/MS 2 0 1 1 86506 86506 0 3549 302 3677 8300 6852 6852 1 29260 0 ELKEGFVEYTEQVVK EEKSTACQMLVCYAKELKEGFVEYTEQVVK ELKEGFVEYTEQVVKLMVPLLKFYFHDGVR K E L V K L 0 0 0 0 0 1 4 1 0 0 1 2 0 1 0 0 1 0 1 3 0 0 15 1 1796.9196 O00410 O00410 691 705 IPO5 Importin-5 yes yes 2 6.1152E-23 306.44 By MS/MS 4 0 1 1 848690 848690 0 3550 103 3678 8301 6853 6853 1 79868 0 ELKIDIIPNPQER RYESLTDPSKLDSGKELKIDIIPNPQERTL GKELKIDIIPNPQERTLTLVDTGIGMTKAD K E L E R T 0 1 1 1 0 1 2 0 0 3 1 1 0 0 2 0 0 0 0 0 0 0 13 1 1563.8621 P08238;Q58FF7 P08238 70 82 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0019001 155.47 By MS/MS 4.5 0.5 1 1 2 2160700 2160700 0 3551 521 3679 8302;8303 6854 6854 1 184010 0 ELKTHYQADIER PETGLVTDAFKLKRKELKTHYQADIERMYG KRKELKTHYQADIERMYGRK__________ K E L E R M 1 1 0 1 0 1 2 0 1 1 1 1 0 0 0 0 1 0 1 0 0 0 12 1 1501.7525 O95573 O95573 704 715 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.026191 83.137 By MS/MS 5 0 1 1 2404100 2404100 0 3552 417 3680 8304 6855 6855 1 24112 0 ELKVGIPVTDENGNR VAAANCINIPLMRQRELKVGIPVTDENGNR ELKVGIPVTDENGNRLGESANAAKQAITQV R E L N R L 0 1 2 1 0 0 2 2 0 1 1 1 0 0 1 0 1 0 0 2 0 0 15 1 1639.8529 Q9H9B4 Q9H9B4 200 214 SFXN1 Sideroflexin-1 yes yes 3 0.00023322 137.93 By MS/MS 8 0 1 1 883320 883320 0 3553 2485 3681 8305 6856 6856 1 11152 0 ELLAALQK LINDVLHHCQRKQARELLAALQKVVVPIYC CQRKQARELLAALQKVVVPIYCTSFLAVEE R E L Q K V 2 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 884.53312 Q8IWX8 Q8IWX8 232 239 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 2 0.026464 92.467 By MS/MS 3 0.816 1 1 1 3 1240400 1240400 0 3554 1871 3682 8306;8307;8308 6857 6857 1 131450 0 ELLAFQTSEK GIEETILEGHLGVTKELLAFQTSEKKFHIG LGVTKELLAFQTSEKKFHIGCEKGGANLIK K E L E K K 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1164.6027 Q93008;O00507 Q93008 1436 1445 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 7.7433E-06 175.93 By MS/MS 1.5 0.5 1 1 2 2483200 2483200 0 3555 2085 3683 8309;8310 6858;6859 6859 2 812370 0 ELLAFQTSEKK GIEETILEGHLGVTKELLAFQTSEKKFHIG GVTKELLAFQTSEKKFHIGCEKGGANLIKE K E L K K F 1 0 0 0 0 1 2 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 11 1 1292.6976 Q93008;O00507 Q93008 1436 1446 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 3.7105E-07 172.56 By MS/MS 2 0 1 1 1263400 1263400 0 3556 2085 3684 8311 6860 6860 1 427320 0 ELLARKDSETGENIR ADECNKLKEEISKMRELLARKDSETGENIR ELLARKDSETGENIRQAASSLQQASLKLFE R E L I R Q 1 2 1 1 0 0 3 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 15 2 1729.8959 P38646 P38646 620 634 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.0093065 113.54 By MS/MS 5 0 1 1 1170200 1170200 0 3557 850 3685 8312 6861 6861 1 11736 0 ELLDGGANPLQR ALHYAVLADDYRTVKELLDGGANPLQRNEM TVKELLDGGANPLQRNEMGHTPLDYAREGE K E L Q R N 1 1 1 1 0 1 1 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 12 0 1281.6677 Q9H078 Q9H078 284 295 CLPB Caseinolytic peptidase B protein homolog yes yes 2 6.4509E-13 242.39 By MS/MS By MS/MS 6 0 3 2 1 12000000 11941000 58844 3558 2402 3686 8313;8314;8315 6862;6863;6864 6864 3 82084 60298 ELLDQLQQK DIYTRKGPLENPKRRELLDQLQQKLYLIQM ENPKRRELLDQLQQKLYLIQMIPRQNLFTK R E L Q K L 0 0 0 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1113.603 Q9H5Q4 Q9H5Q4 287 295 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 2 2.7347E-22 261.71 By MS/MS 7 0 1 1 1520600 1520600 0 3559 2453 3687 8316 6865 6865 1 23871 0 ELLEKEFR KKDKNTDTLSKKELKELLEKEFRQILKNPD LSKKELKELLEKEFRQILKNPDDPDMVDVF K E L F R Q 0 1 0 0 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 8 1 1062.571 CON__P20930;P20930 CON__P20930 35 42 FLG Filaggrin yes no 2 0.038407 85.161 By MS/MS 3 0 1 1 898670 0 898670 + 3560 53 3688 8317 6866 6866 0 0 114390 ELLELASR IRIEGDPQGVQQAKRELLELASRMENERTK GVQQAKRELLELASRMENERTKDLIIEQRF R E L S R M 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 929.5182 Q00341 Q00341 496 503 HDLBP Vigilin yes yes 2 0.0012931 150.05 By MS/MS 3 0.816 1 1 1 3 4443400 4443400 0 3561 1260 3689 8318;8319;8320 6867;6868 6867 2 194360 0 ELLEPLFK GDEEEEKDYKGPNPRELLEPLFKQSSCSYR YKGPNPRELLEPLFKQSSCSYRIESYWTYE R E L F K Q 0 0 0 0 0 0 2 0 0 0 3 1 0 1 1 0 0 0 0 0 0 0 8 0 987.56408 Q96DZ1 Q96DZ1 102 109 ERLEC1 Endoplasmic reticulum lectin 1 yes yes 2 0.0067988 117.16 By MS/MS 6 0 1 1 461330 461330 0 3562 2139 3690 8321 6869 6869 1 3171.3 0 ELLESLPLSK DLLTSHHMLTAQEEKELLESLPLSKLCNEE AQEEKELLESLPLSKLCNEEQELLRFLFEN K E L S K L 0 0 0 0 0 0 2 0 0 0 4 1 0 0 1 2 0 0 0 0 0 0 10 0 1127.6438 Q13042 Q13042 183 192 CDC16 Cell division cycle protein 16 homolog yes yes 2 0.00064861 153.08 By MS/MS 5 0 1 1 903390 903390 0 3563 1347 3691 8322 6870 6870 1 9060.5 0 ELLESNFTLVGDDGTNK NKNSRLAQAWFNTHRELLESNFTLVGDDGT LESNFTLVGDDGTNKEATSTGKLNQENEHI R E L N K E 0 0 2 2 0 0 2 2 0 0 3 1 0 1 0 1 2 0 0 1 0 0 17 0 1850.8898 Q96A33 Q96A33 173 189 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 6.7965E-17 308.74 By MS/MS 6 0 1 1 2521600 2521600 0 3564 2101 3692 8323 6871 6871 1 17334 0 ELLETWGSSSAIR AMDSQRRPLLLQVLKELLETWGSSSAIRHT LKELLETWGSSSAIRHTPLPQQRHVSKAVL K E L I R H 1 1 0 0 0 0 2 1 0 1 2 0 0 0 0 3 1 1 0 0 0 0 13 0 1447.7307 Q9Y4R8 Q9Y4R8 338 350 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0052953 109.24 By MS/MS 4 0 1 1 508220 508220 0 3565 2900 3693 8324 6872 6872 1 47827 0 ELLEYDLQQR DELSKIIQKVFASRKELLEYDLQQREAATK FASRKELLEYDLQQREAATKSSRTSVQPTF K E L Q R E 0 1 0 1 0 2 2 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 10 0 1305.6565 Q5T4S7 Q5T4S7 3827 3836 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 2.0198E-10 213.85 By MS/MS 2 0.816 1 1 1 3 650870 650870 0 3566 1633 3694 8325;8326;8327 6873;6874;6875 6875 3 106690 0 ELLFLSNANPSLLER NWLQHEKAPTEEGKKELLFLSNANPSLLER ELLFLSNANPSLLERHCAYL__________ K E L E R H 1 1 2 0 0 0 2 0 0 0 5 0 0 1 1 2 0 0 0 0 0 0 15 0 1714.9254 P51398 P51398 379 393 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0079379 98 By MS/MS 7 0 1 1 1135900 1135900 0 3567 993 3695 8328 6876 6876 1 17831 0 ELLGLQQAEER DLEGPVIDESVLSTKELLGLQQAEERLKRD LSTKELLGLQQAEERLKRDCIDRLKRRPRN K E L E R L 1 1 0 0 0 2 3 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1284.6674 Q5VYS8 Q5VYS8 213 223 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 1.3975E-09 228.98 By MS/MS 2.5 0.5 1 1 2 416880 416880 0 3568 1657 3696 8329;8330 6877;6878 6877 2 90219 0 ELLGQGIDYEK MSSVKLRLLCSQVLKELLGQGIDYEKILKL QVLKELLGQGIDYEKILKLTADAKFESGDV K E L E K I 0 0 0 1 0 1 2 2 0 1 2 1 0 0 0 0 0 0 1 0 0 0 11 0 1263.6347 Q9H0A8 Q9H0A8 40 50 COMMD4 COMM domain-containing protein 4 yes yes 2 2.387E-09 215.72 By MS/MS 9 0 1 1 1176200 1176200 0 3569 2404 3697 8331 6879 6879 1 23147 0 ELLGQGLLLR AHNALLDIQSSGRAKELLGQGLLLRSLQER SGRAKELLGQGLLLRSLQERNQEQEKVERR K E L L R S 0 1 0 0 0 1 1 2 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1110.6761 Q99613;B5ME19 Q99613 644 653 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 3.6083E-15 243.29 By MS/MS 5.11 2.77 1 1 1 1 1 1 1 1 1 9 28265000 28265000 0 3570 2252 3698 8332;8333;8334;8335;8336;8337;8338;8339;8340 6880;6881;6882;6883;6884;6885;6886;6887;6888;6889 6883 10 2054800 0 ELLIFNK IKDELKKVCSTNDLKELLIFNKQQVPSGES VCSTNDLKELLIFNKQQVPSGESAILDRVA K E L N K Q 0 0 1 0 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 875.51165 P09874 P09874 263 269 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.041523 96.048 By MS/MS 4 0.816 1 1 1 3 2649400 2649400 0 3571 543 3699 8341;8342;8343 6890 6890 1 184700 0 ELLIIGGVAAR NIKQFKKYIDNPKLRELLIIGGVAARDQLS PKLRELLIIGGVAARDQLSVLENGVDIVVG R E L A R D 2 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1110.6761 Q92499 Q92499 320 330 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 1.5293E-05 168.26 By MS/MS 5 0.816 1 1 1 3 3891800 3891800 0 3572 2046 3700 8344;8345;8346 6891;6892 6892 2 162590 0 ELLILQGGPPQSCTDVK LRDMLDQVYQPLAVRELLILQGGPPQSCTD LILQGGPPQSCTDVKTQMRCRAPAWLRRLC R E L V K T 0 0 0 1 1 2 1 2 0 1 3 1 0 0 2 1 1 0 0 1 0 0 17 0 1853.9557 Q9C0B7 Q9C0B7 274 290 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 2 0.00049297 162.93 By MS/MS 3 0 1 1 96750 96750 0 3573 2389 3701 8347 6893 6893 1 1770.2 0 ELLLQPVTISR VERHNKPEVEVRSSKELLLQPVTISRNEKE RSSKELLLQPVTISRNEKEKVLIEGSINSV K E L S R N 0 1 0 0 0 1 1 0 0 1 3 0 0 0 1 1 1 0 0 1 0 0 11 0 1267.75 P59998 P59998 45 55 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 7.6032E-07 193.83 By MS/MS 9.5 0.5 1 1 2 2303100 2303100 0 3574 1088 3702 8348;8349 6894;6895 6895 2 56819 0 ELLLTGPGLEER ESWPELELAERERRRELLLTGPGLEERVRA RRRELLLTGPGLEERVRAAGGQLPPRLFTL R E L E R V 0 1 0 0 0 0 3 2 0 0 4 0 0 0 1 0 1 0 0 0 0 0 12 0 1325.7191 Q8N1G4 Q8N1G4 23 34 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 1.6788E-08 223.31 By MS/MS 5.5 0.5 1 1 2 4481900 4481900 0 3575 1906 3703 8350;8351 6896 6896 1 43271 0 ELLQDIGDTLSR SLIAQLEEKQQQPTRELLQDIGDTLSRAER PTRELLQDIGDTLSRAERIRIPEPWITPPD R E L S R A 0 1 0 2 0 1 1 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 0 1358.7042 P14373 P14373 246 257 TRIM27 Zinc finger protein RFP yes yes 2 5.9435E-18 258.01 By MS/MS 6 0 1 1 1807900 1807900 0 3576 613 3704 8352 6897 6897 1 12428 0 ELLQEQLEQLQR FQAERQAREKLAEKKELLQEQLEQLQREYS EKKELLQEQLEQLQREYSKLKASCQESARI K E L Q R E 0 1 0 0 0 4 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 12 0 1525.81 Q9Y6K9 Q9Y6K9 327 338 IKBKG NF-kappa-B essential modulator yes yes 2 1.0153E-08 218.55 By MS/MS 6.5 0.5 1 1 2 2109800 2109800 0 3577 2947 3705 8353;8354 6898 6898 1 16808 0 ELLQESALIR RGVVDSEDIPLNLSRELLQESALIRKLRDV LNLSRELLQESALIRKLRDVLQQRLIKFFI R E L I R K 1 1 0 0 0 1 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1170.6608 Q12931 Q12931 403 412 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 1.7867E-07 183.72 By MS/MS By MS/MS 5 0 2 1 1 11438000 11398000 40495 3578 1340 3706 8355;8356 6899;6900 6900 2 114310 34007 ELLSNVDEGIYQLEK EEERQDLTTALGLVKELLSNVDEGIYQLEK ELLSNVDEGIYQLEKGARLQEIYNRMDPRA K E L E K G 0 0 1 1 0 1 3 1 0 1 3 1 0 0 0 1 0 0 1 1 0 0 15 0 1748.8832 Q92974 Q92974 424 438 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 1.7986E-16 276.12 By MS/MS 3.5 0.5 1 1 2 412410 412410 0 3579 2083 3707 8357;8358 6901;6902 6902 2 34320 0 ELLTEFGYK VQDSEMVELVELEIRELLTEFGYKGEETPV VELEIRELLTEFGYKGEETPVIVGSALCAL R E L Y K G 0 0 0 0 0 0 2 1 0 0 2 1 0 1 0 0 1 0 1 0 0 0 9 0 1098.5597 P49411 P49411 201 209 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.00054444 145.34 By MS/MS 8 0.816 1 1 1 3 6049800 6049800 0 3580 949 3708 8359;8360;8361 6903;6904;6905 6903 3 94621 0 ELLTLDEK WRVKFTLAKIRKAARELLTLDEKDPRRLFE KIRKAARELLTLDEKDPRRLFEGNALLRRL R E L E K D 0 0 0 1 0 0 2 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 959.51753 P46781 P46781 59 66 RPS9 40S ribosomal protein S9 yes yes 2 0.010564 110.12 By MS/MS By matching 9.33 0.471 2 1 2 1 9879500 9847900 31573 3581 918 3709 8362;8363;8364 6906 6906 1 200460 71997 ELLTLDEKDPR WRVKFTLAKIRKAARELLTLDEKDPRRLFE KAARELLTLDEKDPRRLFEGNALLRRLVRI R E L P R R 0 1 0 2 0 0 2 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 11 1 1327.6983 P46781 P46781 59 69 RPS9 40S ribosomal protein S9 yes yes 2 0.016263 108.43 By MS/MS By matching 9.33 0.471 2 1 2 1 63195000 63109000 85597 3582 918 3710 8365;8366;8367 6907 6907 1 1248500 195190 ELLTLDEKDPRR WRVKFTLAKIRKAARELLTLDEKDPRRLFE AARELLTLDEKDPRRLFEGNALLRRLVRIG R E L R R L 0 2 0 2 0 0 2 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 12 2 1483.7995 P46781 P46781 59 70 RPS9 40S ribosomal protein S9 yes yes 3 0.01168 88.596 By MS/MS 8.5 0.5 1 1 2 34542000 34542000 0 3583 918 3711 8368;8369 6908 6908 1 666280 0 ELLVHLDDPER NAKSYYQSSVQYLYRELLVHLDDPERAIQD YLYRELLVHLDDPERAIQDAILEVLKEGSG R E L E R A 0 1 0 2 0 0 2 0 1 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1334.683 Q86Y56 Q86Y56 793 803 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.0044397 105.4 By MS/MS 4 0 1 1 1889600 1889600 0 3584 1850 3712 8370 6909 6909 1 177830 0 ELLVPLTSSMYVPGK AKDCLNVLNKSNEGKELLVPLTSSMYVPGK ELLVPLTSSMYVPGKLHDVEHVLIDVGTGY K E L G K L 0 0 0 0 0 0 1 1 0 0 3 1 1 0 2 2 1 0 1 2 0 0 15 0 1632.8797 Q99471 Q99471 61 75 PFDN5 Prefoldin subunit 5 yes yes 2 0.033676 73.951 By MS/MS 10 0 1 1 97874 97874 0 3585 2247 3713 8371 6910 6910 1043 1 5275 0 ELLVTETQEVVK TDVLEALNRLLDDNRELLVTETQEVVKAHP DNRELLVTETQEVVKAHPRFMLFATQNPPG R E L V K A 0 0 0 0 0 1 3 0 0 0 2 1 0 0 0 0 2 0 0 3 0 0 12 0 1386.7606 Q9NU22 Q9NU22 1173 1184 MDN1 Midasin yes yes 2 1.0249E-09 224.75 By MS/MS 2 0.816 1 1 1 3 509280 509280 0 3586 2580 3714 8372;8373;8374 6911 6911 1 116390 0 ELLYGGTSPTAETILK APNPAKATVTAMIARELLYGGTSPTAETIL LLYGGTSPTAETILKNNISSGHVPHGPLTR R E L L K N 1 0 0 0 0 0 2 2 0 1 3 1 0 0 1 1 3 0 1 0 0 0 16 0 1691.8982 O95793 O95793 458 473 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 1.6042E-17 277.15 By MS/MS 6 0 1 1 5590100 5590100 0 3587 426 3715 8375 6912 6912 1 38428 0 ELMAWNQAENR VLAERKALKDAAEHRELMAWNQAENRRLHE AEHRELMAWNQAENRRLHELRIARLRQEER R E L N R R 2 1 2 0 0 1 2 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 11 0 1360.6194 Q9BYN8 Q9BYN8 104 114 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.00021388 141.91 By MS/MS 9 0 1 1 218920 218920 0 3588 2374 3716 8376 6913 6913 1 4308.5 0 ELNFWAK FLPFCHSELIQLVNKELNFWAKRAKQRHNI ELIQLVNKELNFWAKRAKQRHNITLLWDRE K E L A K R 1 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 7 0 906.45995 Q9H078 Q9H078 583 589 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.02729 106.76 By MS/MS 6 0 1 1 2001900 2001900 0 3589 2402 3717 8377 6914 6914 1 13762 0 ELNITAAK LLELEMNSDLKAQLRELNITAAKEIEVGGG DLKAQLRELNITAAKEIEVGGGRKAIIIFV R E L A K E 2 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 858.48108 P62081 P62081 42 49 RPS7 40S ribosomal protein S7 yes yes 2 0.0071584 115.49 By MS/MS By matching 9.33 0.471 2 1 2 1 15337000 15240000 97374 3590 1138 3718 8378;8379;8380 6915 6915 1 303840 222040 ELNITAAKEIEVGGGR LLELEMNSDLKAQLRELNITAAKEIEVGGG LNITAAKEIEVGGGRKAIIIFVPVPQLKSF R E L G R K 2 1 1 0 0 0 3 3 0 2 1 1 0 0 0 0 1 0 0 1 0 0 16 1 1655.8842 P62081 P62081 42 57 RPS7 40S ribosomal protein S7 yes yes 2;3 9.9921E-11 243.37 By MS/MS 9 0 2 2 2502000 2502000 0 3591 1138 3719 8381;8382 6916;6917 6916 2 49239 0 ELNKEEAAQQK NISDYFFQRGETIEKELNKEEAAQQKQAEE TIEKELNKEEAAQQKQAEEKGVVLNRPFHP K E L Q K Q 2 0 1 0 0 2 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 11 1 1286.6466 Q7Z3U7 Q7Z3U7 989 999 MON2 Protein MON2 homolog yes yes 2 2.3839E-12 230.24 By MS/MS 2 0 1 1 462890 462890 0 3592 1787 3720 8383 6918 6918 1 156570 0 ELNLAISR APPGFGPEHMGDLQRELNLAISRDSRGGRE HMGDLQRELNLAISRDSRGGRELTGPAVLA R E L S R D 1 1 1 0 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 914.51853 P28340 P28340 167 174 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.023515 95.741 By MS/MS 3 0 1 1 212570 212570 0 3593 754 3721 8384 6919 6919 1 3889.4 0 ELNLSFCEIKR VAIADAIRGGLPKLKELNLSFCEIKRDAAL PKLKELNLSFCEIKRDAALAVAEAMADKAE K E L K R D 0 1 1 0 1 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 11 1 1407.718 P46060 P46060 297 307 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0031893 122.94 By MS/MS 5 0 1 1 1038100 1038100 0 3594 908 3722 8385 6920 6920 1 10412 0 ELNLVLSVR LDSLMSVEVRQTLERELNLVLSVREVRQLT RQTLERELNLVLSVREVRQLTLRKLQELSS R E L V R E 0 1 1 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 9 0 1041.6182 P49327 P49327 2169 2177 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.001839 123.35 By MS/MS 2 0.816 1 1 1 3 251060 251060 0 3595 946 3723 8386;8387;8388 6921 6921 1 71801 0 ELNVMFIETSAK DKRQVSIEEGERKAKELNVMFIETSAKAGY KAKELNVMFIETSAKAGYNVKQLFRRVAAA K E L A K A 1 0 1 0 0 0 2 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 12 0 1380.6959 P20340 P20340 147 158 RAB6A Ras-related protein Rab-6A yes yes 2 1.4661E-06 198.81 By MS/MS 9 0 1 1 182000 182000 0 3596 670 3724 8389 6922 6922 1 3581.8 0 ELPELLQR VIEQGGIQTVDQLIKELPELLQRNREILDE TVDQLIKELPELLQRNREILDESLRLLDEE K E L Q R N 0 1 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 8 0 996.5604 Q8WUM4 Q8WUM4 439 446 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.018199 101.64 By MS/MS 4.5 0.5 1 1 2 1249400 1249400 0 3597 2018 3725 8390;8391 6923 6923 1 106930 0 ELPEYYELIR GRQLSEVFIQLPSRKELPEYYELIRKPVDF LPSRKELPEYYELIRKPVDFKKIKERIRNH K E L I R K 0 1 0 0 0 0 3 0 0 1 2 0 0 0 1 0 0 0 2 0 0 0 10 0 1323.6711 P51532;P51531 P51532 1493 1502 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 0.0010136 123.35 By MS/MS 2 0 1 1 211030 211030 0 3598 995 3726 8392 6924 6924 1 71377 0 ELPPDQAEYCIAR LAGDKNFITAEELRRELPPDQAEYCIARMA RRELPPDQAEYCIARMAPYQGPDAVPGALD R E L A R M 2 1 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 13 0 1560.7242 O43707;P12814 O43707 870 882 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 2 0.023274 83.045 By MS/MS 4 0 1 1 972000 972000 0 3599 229;595 3727 8393 6925 6925 1 91472 0 ELPTVVFR VPKENLESWLNYLKKELPTVVFRASTKPKD WLNYLKKELPTVVFRASTKPKDKGKITKRV K E L F R A 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 8 0 959.54402 Q9BVP2 Q9BVP2 198 205 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 2 0.037283 87.323 By MS/MS 5 0 1 1 466460 466460 0 3600 2337 3728 8394 6926 6926 1 4678.4 0 ELQALGFQPGPITDTTR ______________________________ QALGFQPGPITDTTRDVYRNKLRRLRGEAR R E L T R D 1 1 0 1 0 2 1 2 0 1 2 0 0 1 2 0 3 0 0 0 0 0 17 0 1842.9476 Q8NC56 Q8NC56 12 28 LEMD2 LEM domain-containing protein 2 yes yes 2 3.9159E-11 238.65 By MS/MS 6 0 1 1 2639900 2639900 0 3601 1948 3729 8395 6927 6927 1 18147 0 ELQALGFQPGPITDTTRDVYR ______________________________ FQPGPITDTTRDVYRNKLRRLRGEARLRDE R E L Y R N 1 2 0 2 0 2 1 2 0 1 2 0 0 1 2 0 3 0 1 1 0 0 21 1 2376.2074 Q8NC56 Q8NC56 12 32 LEMD2 LEM domain-containing protein 2 yes yes 3 0.0052158 80.585 By MS/MS 6 0 1 1 2046900 2046900 0 3602 1948 3730 8396 6928 6928 1 14071 0 ELQCLTPR ADVIQATGDAICIFRELQCLTPRGRYDIRI DAICIFRELQCLTPRGRYDIRIYPTFLHLH R E L P R G 0 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 8 0 1015.5121 Q08945 Q08945 204 211 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.01093 109.71 By MS/MS 5 0 1 1 1402000 1402000 0 3603 1313 3731 8397 6929 6929 1 14061 0 ELQELNELFKPVVAAQK QSEAEKKLKKDDKKKELQELNELFKPVVAA QELNELFKPVVAAQKISKGADPKSVVCAFF K E L Q K I 2 0 1 0 0 2 3 0 0 0 3 2 0 1 1 0 0 0 0 2 0 0 17 1 1955.0728 Q8WU90 Q8WU90 77 93 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 3 0.00012545 135.91 By MS/MS 6 0 1 1 1522400 1522400 0 3604 2012 3732 8398 6930 6930 1 10466 0 ELQELVQYPVEHPDK QVTWEDIGGLEDVKRELQELVQYPVEHPDK ELQELVQYPVEHPDKFLKFGMTPSKGVLFY R E L D K F 0 0 0 1 0 2 3 0 1 0 2 1 0 0 2 0 0 0 1 2 0 0 15 0 1822.9101 P55072 P55072 488 502 VCP Transitional endoplasmic reticulum ATPase yes yes 2;3 2.6789E-05 223.36 By MS/MS 4 0 2 2 1674900 1674900 0 3605 1054 3733 8399;8400 6931;6932 6932 2 157620 0 ELQEQMSR VRNQQTIGARKELQKELQEQMSRGDPFKDI ARKELQKELQEQMSRGDPFKDIILYVKEEM K E L S R G 0 1 0 0 0 2 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 1019.4706 Q7L1Q6 Q7L1Q6 260 267 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.025855 93.143 By MS/MS 8 0.816 1 1 1 3 1238100 1238100 0 3606 1760 3734 8401;8402;8403 6933 6933 1 20114 0 ELQGFLDGVK DACIRERFVDSKRARELQGFLDGVKKGQEQ SKRARELQGFLDGVKKGQEQVLGDLSMILC R E L V K K 0 0 0 1 0 1 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1104.5815 Q8WX92 Q8WX92 282 291 NELFB Negative elongation factor B yes yes 2 0.0010666 122.33 By MS/MS 5 0 1 1 366060 366060 0 3607 2038 3735 8404 6934 6934 1 3671.4 0 ELQHAALGGTATR EELNRKAEELDRRERELQHAALGGTATRQN ERELQHAALGGTATRQNNWPPLPSFCPVQP R E L T R Q 3 1 0 0 0 1 1 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 13 0 1323.6895 O14828 O14828 119 131 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 0.0085089 105.95 By MS/MS 8 0.816 1 1 1 3 2094800 2094800 0 3608 141 3736 8405;8406;8407 6935 6935 0 30241 0 ELQIDSLLQQEK KFILEQQEREKLQQKELQIDSLLQQEKELS QQKELQIDSLLQQEKELSSSLHQKLCSFQE K E L E K E 0 0 0 1 0 3 2 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 12 0 1442.7617 O75330 O75330 339 350 HMMR Hyaluronan mediated motility receptor yes yes 2 8.8851E-19 268.91 By MS/MS 4.5 0.5 1 1 2 838690 838690 0 3609 311 3737 8408;8409 6936 6936 1 61583 0 ELQLRPLAGR CEAIQGTLTAEQLERELQLRPLAGR_____ EQLERELQLRPLAGR_______________ R E L G R - 1 2 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 0 0 0 0 0 10 1 1151.6775 Q9NPB0 Q9NPB0 174 183 SAYSD1 SAYSvFN domain-containing protein 1 yes yes 2 0.0074739 113.71 By MS/MS 9 0 1 1 561550 561550 0 3610 2530 3738 8410 6937 6937 1 11051 0 ELQPQQQPR EKPSTLQRPQETVIRELQPQQQPRTIERRD QETVIRELQPQQQPRTIERRDLQYITVSKE R E L P R T 0 1 0 0 0 4 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 1122.5782 P55196 P55196 1480 1488 MLLT4 Afadin yes yes 2 8.6601E-05 148.99 By MS/MS 2.5 0.5 1 1 2 470830 470830 0 3611 1057 3739 8411;8412 6938 6938 1 102070 0 ELQQAQTTRPESTQIQPQPGFCIK ADSARFEELLLQASKELQQAQTTRPESTQI PESTQIQPQPGFCIKTNSSEGKVFINICHS K E L I K T 1 1 0 0 1 6 2 1 0 2 1 1 0 1 3 1 3 0 0 0 0 0 24 1 2784.3865 Q9NWS0 Q9NWS0 34 57 PIH1D1 PIH1 domain-containing protein 1 yes yes 3 6.714E-09 179.07 By MS/MS 7 0 1 1 1172600 1172600 0 3612 2610 3740 8413 6939 6939 1 18407 0 ELQSAVPRDVEDVPITVE LRLQPHPQLSPEIRRELQSAVPRDVEDVPI SAVPRDVEDVPITVE_______________ R E L V E - 1 1 0 2 0 1 3 0 0 1 1 0 0 0 2 1 1 0 0 4 0 0 18 1 1995.0161 Q13895 Q13895 420 437 BYSL Bystin yes yes 2 0.0055693 111.31 By MS/MS 6 0 1 1 4758500 4758500 0 3613 1413 3741 8414 6940;6941 6941 2 32711 0 ELQSLLVEER VVDSADRQRMQDCQRELQSLLVEERLAGAT QDCQRELQSLLVEERLAGATLLIFANKQDL R E L E R L 0 1 0 0 0 1 3 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1214.6507 P36404 P36404 105 114 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 1.3082E-07 188.99 By MS/MS 9.5 0.5 1 1 2 2774800 2774800 0 3614 832 3742 8415;8416 6942;6943 6942 2 72466 0 ELQSMADQEK SLLINAVEASCIRTRELQSMADQEKISPAA CIRTRELQSMADQEKISPAALKKTLLDRVK R E L E K I 1 0 0 1 0 2 2 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 10 0 1177.5285 Q96C36 Q96C36 267 276 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 2.4755E-20 254.82 By MS/MS By matching 7.67 0.471 1 2 2 1 5526700 5500500 26196 3615 2120 3743 8417;8418;8419 6944;6945 6945 2 70975 35350 ELQSMADQEQVSPAAIK SLLINAVEASCIRTRELQSMADQEQVSPAA QSMADQEQVSPAAIKKTILDKVKLDSPAGT R E L I K K 3 0 0 1 0 3 2 0 0 1 1 1 1 0 1 2 0 0 0 1 0 0 17 0 1843.8986 P32322 P32322 267 283 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 1.9623E-24 284.91 By MS/MS 8 0 1 1 1238100 1238100 0 3616 797 3744 8420 6946 6946 1 15631 0 ELQSMADQEQVSPAAIKK SLLINAVEASCIRTRELQSMADQEQVSPAA SMADQEQVSPAAIKKTILDKVKLDSPAGTA R E L K K T 3 0 0 1 0 3 2 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 18 1 1971.9935 P32322 P32322 267 284 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.00023296 123.63 By MS/MS 8 0 2 2 5331500 5331500 0 3617 797 3745;3746 8421;8422 6947;6948 6947 392 2 67310 0 ELQSQIQEAR GYRVATFHDCEDAARELQSQIQEARADLAR EDAARELQSQIQEARADLARRGLRF_____ R E L A R A 1 1 0 0 0 3 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1200.6099 Q9P2X0 Q9P2X0 73 82 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes yes 2 9.7629E-08 192.64 By MS/MS 10 0 1 1 1501800 1501800 0 3618 2692 3747 8423 6949 6949 1 80939 0 ELQSVEQEVR LLGSLYALGIPKASKELQSVEQEVRWRMRK PKASKELQSVEQEVRWRMRKLKYKHLAFLA K E L V R W 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1215.6095 Q969Z0 Q969Z0 164 173 TBRG4 Protein TBRG4 yes yes 2 0.0033511 117.31 By MS/MS 6 0 1 1 0 0 0 3619 2099 3748 8424 6950 6950 1 0 0 ELQVGIPVADEAGQR VAAANCINIPLMRQRELQVGIPVADEAGQR ELQVGIPVADEAGQRLGYSVTAAKQGIFQV R E L Q R L 2 1 0 1 0 2 2 2 0 1 1 0 0 0 1 0 0 0 0 2 0 0 15 0 1580.8158 Q9BWM7 Q9BWM7 199 213 SFXN3 Sideroflexin-3 yes yes 2 0.0020556 111.88 By MS/MS 7.5 0.5 1 1 2 1736000 1736000 0 3620 2352 3749 8425;8426 6951 6951 1 24544 0 ELREQLKELTK RKKLLEHKEIDGRLKELREQLKELTKQYEK GRLKELREQLKELTKQYEKSENDLKALQSV K E L T K Q 0 1 0 0 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 11 2 1385.7878 P62333 P62333 28 38 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.013804 101.38 By MS/MS 7 0 1 1 2123000 2123000 0 3621 1159 3750 8427 6952 6952 1 33328 0 ELSANTAAFAK RKLHVSVEALVCHRKELSANTAAFAKSAAM CHRKELSANTAAFAKSAAMLGNSEDHTALS K E L A K S 4 0 1 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1121.5717 O60749 O60749 336 346 SNX2 Sorting nexin-2 yes yes 2 0.0043929 105.52 By MS/MS 5 0 1 1 1611300 1611300 0 3622 274 3751 8428 6953 6953 1 16160 0 ELSAQPEVHR ERADQRFVWNGHLLRELSAQPEVHRFALPV GHLLRELSAQPEVHRFALPVLHGFITMHSC R E L H R F 1 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1164.5887 Q9NTJ5 Q9NTJ5 175 184 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0002553 143.37 By MS/MS 1.5 0.5 1 1 2 507310 507310 0 3623 2576 3752 8429;8430 6954;6955 6954 2 151320 0 ELSAVTFPDIIR GGEPDFHAVEPYTKKELSAVTFPDIIRNYK TKKELSAVTFPDIIRNYKVMAAENIPENPL K E L I R N 1 1 0 1 0 0 1 0 0 2 1 0 0 1 1 1 1 0 0 1 0 0 12 0 1359.7398 P42224 P42224 638 649 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 3.1528E-05 173.24 By MS/MS 4.5 0.5 1 1 2 815010 815010 0 3624 877 3753 8431;8432 6956;6957;6958;6959 6959 4 45942 0 ELSDFISYLQR PANKKLNPKKYEGGRELSDFISYLQREATN EGGRELSDFISYLQREATNPPVIQEEKPKK R E L Q R E 0 1 0 1 0 1 1 0 0 1 2 0 0 1 0 2 0 0 1 0 0 0 11 0 1369.6878 P30101 P30101 472 482 PDIA3 Protein disulfide-isomerase A3 yes yes 2 2.2346E-07 200.6 By MS/MS 6 0 1 1 958200 958200 0 3625 768 3754 8433 6960 6960 1 6586.9 0 ELSDIAHR ______________________________ LTPEQKKELSDIAHRIVAPGKGILAADEST K E L H R I 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 939.47739 P04075 P04075 15 22 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.003205 133.81 By MS/MS By matching 7 0 2 1 1 3524800 3513600 11158 3626 467 3755 8434;8435 6961 6961 1 55158 20095 ELSDLESAR SRLLDTIGISQPQWRELSDLESARQFCQTV SQPQWRELSDLESARQFCQTVGYPCVVRPS R E L A R Q 1 1 0 1 0 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 1018.4931 P27708 P27708 1067 1075 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0035685 111.74 By MS/MS 2 0.816 1 1 1 3 3012700 3012700 0 3627 745 3756 8436;8437;8438 6962;6963 6963 2 751930 0 ELSDPAGAIIYTSR SLHDQGAGGNGNVLKELSDPAGAIIYTSRF KELSDPAGAIIYTSRFQLGDPTLNALEIWG K E L S R F 2 1 0 1 0 0 1 1 0 2 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1491.7569 O15067 O15067 528 541 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.00018995 174.57 By MS/MS 3 0 1 1 318070 318070 0 3628 157 3757 8439 6964 6964 1 5819.9 0 ELSEALGQIFDSQR CTNETRSTHTLDLSRELSEALGQIFDSQRG RELSEALGQIFDSQRGCDLSISVNVQGEDA R E L Q R G 1 1 0 1 0 2 2 1 0 1 2 0 0 1 0 2 0 0 0 0 0 0 14 0 1591.7842 Q08380 Q08380 138 151 LGALS3BP Galectin-3-binding protein yes yes 2 0.00048007 134.56 By MS/MS 5 0 1 1 300320 300320 0 3629 1309 3758 8440 6965 6965 1 3012 0 ELSEITTAEAEPVVPR EDSIEKDKEEAAISRELSEITTAEAEPVVP LSEITTAEAEPVVPRGGFDSPFYRDSLPGS R E L P R G 2 1 0 0 0 0 4 0 0 1 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1739.8941 Q92574 Q92574 485 500 TSC1 Hamartin yes yes 2 0.00027583 136.38 By MS/MS 3.5 0.5 1 1 2 679270 679270 0 3630 2057 3759 8441;8442 6966 6966 1 33943 0 ELSGVFR VWQVIVKPRGLGHRKELSGVFRLCLTDEEV PRGLGHRKELSGVFRLCLTDEEVVFVRLNT K E L F R L 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 7 0 806.42865 O14654 O14654 249 255 IRS4 Insulin receptor substrate 4 yes yes 2 0.029272 105.27 By MS/MS 3 0 1 1 638360 638360 0 3631 129 3760 8443 6967 6967 1 11680 0 ELSLAGNELGDEGAR CGDLCRVLRAKESLKELSLAGNELGDEGAR ELSLAGNELGDEGARLLCETLLEPGCQLES K E L A R L 2 1 1 1 0 0 3 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1529.7322 P13489 P13489 288 302 RNH1 Ribonuclease inhibitor yes yes 2 4.238E-07 211.22 By MS/MS 7.5 0.5 1 1 2 7558800 7558800 0 3632 601 3761 8444;8445 6968 6968 1 116880 0 ELSLDDPEVEQVSGR SVNEKIRDRLPVNVRELSLDDPEVEQVSGR ELSLDDPEVEQVSGRGLPDDHAGPIRVVNI R E L G R G 0 1 0 2 0 1 3 1 0 0 2 0 0 0 1 2 0 0 0 2 0 0 15 0 1671.7952 Q9BTE6 Q9BTE6 172 186 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 2 0.0084445 106.79 By MS/MS 7 0 1 1 529340 529340 0 3633 2316 3762 8446 6969 6969 0 8309.6 0 ELSPDFYQPGPDYVK LAARQECDIARAVARELSPDFYQPGPDYVK ELSPDFYQPGPDYVKQRFQEGVDAKENPEE R E L V K Q 0 0 0 2 0 1 1 1 0 0 1 1 0 1 3 1 0 0 2 1 0 0 15 0 1753.8199 Q9HDC5 Q9HDC5 411 425 JPH1 Junctophilin-1 yes yes 2 6.125E-06 202.18 By MS/MS 5.5 0.5 1 1 2 3871000 3871000 0 3634 2520 3763 8447;8448 6970 6970 1 37335 0 ELSPGIFGPMPNLR LPQLNRLTLFGNSLKELSPGIFGPMPNLRE KELSPGIFGPMPNLRELWLYDNHISSLPDN K E L L R E 0 1 1 0 0 0 1 2 0 1 2 0 1 1 3 1 0 0 0 0 0 0 14 0 1526.7915 Q8TF66 Q8TF66 283 296 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 0.00026514 146.11 By MS/MS 10 0 2 2 133160 0 133160 3635 2008 3764 8449;8450 6971;6972;6973 6973 973 3 0 170480 ELSQNTDESGLNDEAIAK SVQRSNKKMVASKRKELSQNTDESGLNDEA QNTDESGLNDEAIAKQLQLDEDAELERQLH K E L A K Q 2 0 2 2 0 1 3 1 0 1 2 1 0 0 0 2 1 0 0 0 0 0 18 0 1932.8912 P35251 P35251 188 205 RFC1 Replication factor C subunit 1 yes yes 2 0.00016985 175.01 By MS/MS 3 0 1 1 815480 815480 0 3636 818 3765 8451 6974 6974 1 14921 0 ELSRKPDIYER AEQKLFSEKRVELLKELSRKPDIYERLASA ELLKELSRKPDIYERLASALAPSIYEHEDI K E L E R L 0 2 0 1 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 11 2 1404.7361 P33991 P33991 451 461 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.040456 72.652 By MS/MS 4 0 1 1 0 0 0 3637 806 3766 8452 6975 6975 1 0 0 ELSTKEPGR SPASPKISLAPTDVKELSTKEPGRTLEPQE APTDVKELSTKEPGRTLEPQELARIAGKVP K E L G R T 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 1 1015.5298 Q8WWM7 Q8WWM7 508 516 ATXN2L Ataxin-2-like protein yes yes 2 0.0091439 123.21 By MS/MS 3.5 0.5 1 1 2 495500 495500 0 3638 2036 3767 8453;8454 6976 6976 1 34912 0 ELSTTLNADEAVTR RIPAVKEKISKFFGKELSTTLNADEAVTRG KELSTTLNADEAVTRGCALQCAILSPAFKV K E L T R G 2 1 1 1 0 0 2 0 0 0 2 0 0 0 0 1 3 0 0 1 0 0 14 0 1518.7526 P34932 P34932 361 374 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 0.00089628 140.45 By MS/MS 4 0 1 1 1055100 1055100 0 3639 810 3768 8455 6977 6977 1 99291 0 ELTASHATK VLCGRNGGALEELIRELTASHATKVQTHKP LEELIRELTASHATKVQTHKPYLVTFDLTD R E L T K V 2 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 9 0 956.49271 Q6IAN0 Q6IAN0 95 103 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 0.0048559 109.48 By MS/MS 8 0 1 1 1794300 1794300 0 3640 1681 3769 8456 6978 6978 1 22653 0 ELTASVTEAIPVSR SDLRLVVGDSLKAEKELTASVTEAIPVSRD KELTASVTEAIPVSRDWELLPSAAASAEPQ K E L S R D 2 1 0 0 0 0 2 0 0 1 1 0 0 0 1 2 2 0 0 2 0 0 14 0 1471.7882 P48634 P48634 1784 1797 PRRC2A Protein PRRC2A yes yes 2 0.012514 105.25 By MS/MS 1 0 1 1 164090 164090 0 3641 938 3770 8457 6979 6979 1 39540 0 ELTAVVQK TRTQNVLGEKGRRIRELTAVVQKRFGFPEG EKGRRIRELTAVVQKRFGFPEGSVELYAEK R E L Q K R 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 8 0 886.51238 P23396 P23396 68 75 RPS3 40S ribosomal protein S3 yes yes 2 0.03615 87.754 By MS/MS 8 0 1 1 14023000 14023000 0 3642 703 3771 8458 6980 6980 1 177040 0 ELTAVVQKR TRTQNVLGEKGRRIRELTAVVQKRFGFPEG KGRRIRELTAVVQKRFGFPEGSVELYAEKV R E L K R F 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 1 1042.6135 P23396 P23396 68 76 RPS3 40S ribosomal protein S3 yes yes 2 4.8276E-15 221.33 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 41616000 41478000 137940 3643 703 3772 8459;8460;8461;8462;8463 6981;6982;6983;6984 6983 4 581290 186150 ELTDEEAER LAKEAKSETSGPQIKELTDEEAERLQLEID SGPQIKELTDEEAERLQLEIDQKKDAENHE K E L E R L 1 1 0 1 0 0 4 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1090.4778 Q9Y266 Q9Y266 106 114 NUDC Nuclear migration protein nudC yes yes 2 0.0035685 111.74 By MS/MS 7 0 1 1 389420 389420 0 3644 2816 3773 8464 6985 6985 1 6113.2 0 ELTLGNLLR SNKFDHLTNRKPQSKELTLGNLLRMRLARL RKPQSKELTLGNLLRMRLARLSSTPRKADL K E L L R M 0 1 1 0 0 0 1 1 0 0 4 0 0 0 0 0 1 0 0 0 0 0 9 0 1027.6026 Q9H4H8 Q9H4H8 323 331 FAM83D Protein FAM83D yes yes 2 0.00066895 141.52 By MS/MS 5 0 1 1 385360 385360 0 3645 2446 3774 8465 6986 6986 1 3865 0 ELTLLGKPK IMDKHLKRKAMTKKKELTLLGKPKRPRSAY AMTKKKELTLLGKPKRPRSAYNVYVAERFQ K E L P K R 0 0 0 0 0 0 1 1 0 0 3 2 0 0 1 0 1 0 0 0 0 0 9 1 997.61718 Q00059 Q00059 148 156 TFAM Transcription factor A, mitochondrial yes yes 2 0.039251 104.06 By MS/MS 8.5 0.5 1 1 2 2186400 2186400 0 3646 1258 3775 8466;8467 6987 6987 1 36014 0 ELTNQQEASVER KKYRQLTAHLQDVNRELTNQQEASVERQQQ VNRELTNQQEASVERQQQPPPETFDFKIKF R E L E R Q 1 1 1 0 0 2 3 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1402.6688 Q14203 Q14203 533 544 DCTN1 Dynactin subunit 1 yes yes 2 9.7252E-25 271.21 By MS/MS By matching 3.75 0.829 2 1 1 3 1 5022400 4907600 114860 3647 1432 3776 8468;8469;8470;8471 6988 6988 1 148180 14621 ELTPQVVSAAR KSTVEGIQASVKTARELTPQVVSAARILLR KTARELTPQVVSAARILLRNPGNQAAYEHF R E L A R I 2 1 0 0 0 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 11 0 1169.6404 P18206 P18206 670 680 VCL Vinculin yes yes 2 0.00063292 128.91 By MS/MS 3 0 1 1 2017700 2017700 0 3648 653 3777 8472 6989 6989 1 36917 0 ELTTEIDNNIEQISSYK QNRKDAEAWFNEKSKELTTEIDNNIEQISS TTEIDNNIEQISSYKSEITELRRNVQALEI K E L Y K S 0 0 2 1 0 1 3 0 0 3 1 1 0 0 0 2 2 0 1 0 0 0 17 0 1995.9637 CON__P13645;P13645 CON__P13645 346 362 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 3.5362E-87 383.98 By MS/MS By MS/MS 5.5 2.47 1 1 1 2 1 4 1 1 1 1 5 9 14463000 9542300 4921000 + 3649 50 3778 8473;8474;8475;8476;8477;8478;8479;8480;8481;8482;8483;8484;8485;8486 6990;6991;6992;6993;6994;6995;6996;6997;6998;6999;7000;7001;7002;7003;7004;7005 7002 15 483050 3530400 ELTVSNNDINEAGVR CEPLASVLRAKPDFKELTVSNNDINEAGVR ELTVSNNDINEAGVRVLCQGLKDSPCQLEA K E L V R V 1 1 3 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 15 0 1629.7958 P13489 P13489 174 188 RNH1 Ribonuclease inhibitor yes yes 2 3.0434E-33 310.34 By MS/MS 7.5 0.5 1 1 2 10320000 10320000 0 3650 601 3779 8487;8488 7006 7006 1 158870 0 ELVFKEDGQEYAQVIK KNRRRGKNENESEKRELVFKEDGQEYAQVI LVFKEDGQEYAQVIKMLGNGRLEAMCFDGV R E L I K M 1 0 0 1 0 2 3 1 0 1 1 2 0 1 0 0 0 0 1 2 0 0 16 1 1894.9676 P47813;O14602 P47813 25 40 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2;3 3.0207E-33 320.07 By MS/MS 9 0 2 2 1642100 1642100 0 3651 927 3780 8489;8490 7007;7008 7008 2 32317 0 ELVGPPLAETVFTPK AKKCVSCQNLNPSNKELVGPPLAETVFTPK ELVGPPLAETVFTPKTSPENVQDRFALVTP K E L P K T 1 0 0 0 0 0 2 1 0 0 2 1 0 1 3 0 2 0 0 2 0 0 15 0 1596.8763 P49792 P49792 1384 1398 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0037307 107.09 By MS/MS 1.5 0.5 1 1 2 112390 112390 0 3652 964 3781 8491;8492 7009;7010;7011 7009 3 32044 0 ELVHYQQSPGEDTSLR VTTSTYTMEVERLKKELVHYQQSPGEDTSL LVHYQQSPGEDTSLRLQEEVESLRTELQRA K E L L R L 0 1 0 1 0 2 2 1 1 0 2 0 0 0 1 2 1 0 1 1 0 0 16 0 1857.8857 Q9ULV0 Q9ULV0 965 980 MYO5B Unconventional myosin-Vb yes yes 3 0.0267 85.976 By matching By MS/MS 2 0 2 1 1 347440 282070 65373 3653 2775 3782 8493;8494 7012 7012 1 95408 92450 ELVNVDAETFPGTQGQK ESGSVTKSKGLSMDRELVNVDAETFPGTQG VNVDAETFPGTQGQKGIQPWFGPGEETNMG R E L Q K G 1 0 1 1 0 2 2 2 0 0 1 1 0 1 1 0 2 0 0 2 0 0 17 0 1831.8952 Q96D09 Q96D09 174 190 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 6.8045E-05 225.33 By MS/MS 4 0 1 1 1087600 1087600 0 3654 2131 3783 8495 7013 7013 1 102350 0 ELVSCSNCTDYQAR KLDLEAWFPGSGAFRELVSCSNCTDYQARR RELVSCSNCTDYQARRLRIRYGQTKKMMDK R E L A R R 1 1 1 1 2 1 1 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 14 0 1701.7087 P49591 P49591 391 404 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 1.7262E-16 253.97 By MS/MS 6 0 1 1 1845100 1845100 0 3655 952 3784 8496 7014 7014 1 12684 0 ELVSDANQHVK CRENVIMSQILPCIKELVSDANQHVKSALA PCIKELVSDANQHVKSALASVIMGLSPILG K E L V K S 1 0 1 1 0 1 1 0 1 0 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1238.6255 P30153 P30153 332 342 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 9.0777E-05 136.99 By MS/MS 5 0 1 1 622230 622230 0 3656 769 3785 8497 7015 7015 1 6240.7 0 ELVVTQLGYDTR AIDTQNKPITSEKIKELVVTQLGYDTRVTI KIKELVVTQLGYDTRVTILGHVQRGGTPSA K E L T R V 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 2 0 1 2 0 0 12 0 1392.7249 Q01813 Q01813 290 301 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 8.014E-05 158.3 By MS/MS 5 0 1 1 652930 652930 0 3657 1271 3786 8498 7016 7016 1 6548.6 0 ELWFSDDPNVTK SEDPELPYMRPPLSKELWFSDDPNVTKTLR LSKELWFSDDPNVTKTLRFKQWNGKERSIY K E L T K T 0 0 1 2 0 0 1 0 0 0 1 1 0 1 1 1 1 1 0 1 0 0 12 0 1449.6776 O95831 O95831 178 189 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 2.4341E-06 208.15 By MS/MS 6 0.816 1 1 1 3 18324000 18324000 0 3658 429 3787 8499;8500;8501 7017;7018;7019 7017 3 176820 0 ELYDKGGEQAIK QISQAYEVLSDAKKRELYDKGGEQAIKEGG KKRELYDKGGEQAIKEGGAGGGFGSPMDIF R E L I K E 1 0 0 1 0 1 2 2 0 1 1 2 0 0 0 0 0 0 1 0 0 0 12 1 1349.6827 P31689 P31689 62 73 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 3.0759E-05 183.85 By MS/MS By matching 7.71 1.39 2 1 2 1 1 6 1 15935000 15916000 18823 3659 787 3788 8502;8503;8504;8505;8506;8507;8508 7020;7021;7022;7023 7020 4 154320 19288 ELYDRYGEQGLR EISFAYEVLSNPEKRELYDRYGEQGLREGS EKRELYDRYGEQGLREGSGGGGGMDDIFSH R E L L R E 0 2 0 1 0 1 2 2 0 0 2 0 0 0 0 0 0 0 2 0 0 0 12 1 1497.7212 O60884 O60884 64 75 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2;3 0.00014018 164.66 By MS/MS 6.5 0.5 2 2 4 17177000 17177000 0 3660 285 3789 8509;8510;8511;8512 7024;7025;7026 7026 3 237180 0 ELYDVYVDNQNVK SYVACTTEKIFEEKRELYDVYVDNQNVKTH KRELYDVYVDNQNVKTHHDHLQPLLKINSA R E L V K T 0 0 2 2 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 3 0 0 13 0 1597.7624 A4D1U4 A4D1U4 329 341 LCHN Protein LCHN yes yes 2 6.3659E-05 177.44 By MS/MS 1.5 0.5 1 1 2 191790 191790 0 3661 17 3790 8513;8514 7027 7027 1 55071 0 ELYGSILQENPQVVYK TKVLNIVKPNIAHFRELYGSILQENPQVVY LYGSILQENPQVVYKSQQGWLEIDKSPEGQ R E L Y K S 0 0 1 0 0 2 2 1 0 1 2 1 0 0 1 1 0 0 2 2 0 0 16 0 1878.9727 Q96BW9 Q96BW9 214 229 TAMM41 Phosphatidate cytidylyltransferase, mitochondrial yes yes 2 2.2627E-33 309.35 By MS/MS 7.5 0.5 1 1 2 1986900 1986900 0 3662 2117 3791 8515;8516 7028;7029 7029 2 29339 0 ELYIQHAK KTVKENWKNLSDSEKELYIQHAKEDETRYH NLSDSEKELYIQHAKEDETRYHNEMKSWEE K E L A K E 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1000.5342 Q00059 Q00059 198 205 TFAM Transcription factor A, mitochondrial yes yes 2 0.0014033 138.83 By MS/MS 8.5 0.5 1 1 2 886250 886250 0 3663 1258 3792 8517;8518 7030 7030 1 16154 0 ELYLEDSPLELK IVDLIHDIQIVSTTRELYLEDSPLELKIQA TTRELYLEDSPLELKIQALDSEGNTFSTLA R E L L K I 0 0 0 1 0 0 3 0 0 0 4 1 0 0 1 1 0 0 1 0 0 0 12 0 1447.7446 Q8TEM1 Q8TEM1 127 138 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 1.0117E-08 215.06 By MS/MS 1.5 0.5 1 1 2 195050 195050 0 3664 2001 3793 8519;8520 7031;7032;7033 7032 3 58122 0 ELYLEEALQNER PEVIRALKKSVCSGRELYLEEALQNERDLL SGRELYLEEALQNERDLLGTVWGGPANLEA R E L E R D 1 1 1 0 0 1 4 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 12 0 1505.7362 Q9NTX5 Q9NTX5 272 283 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 2.5342E-18 265.36 By MS/MS 8 0 1 1 435490 435490 0 3665 2578 3794 8521 7034 7034 1 5498.1 0 ELYLFDVLR PSPEKAEEESERLLRELYLFDVLRADRTTA SERLLRELYLFDVLRADRTTAAHGLELRVP R E L L R A 0 1 0 1 0 0 1 0 0 0 3 0 0 1 0 0 0 0 1 1 0 0 9 0 1166.6336 P08243 P08243 396 404 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 1.1753E-12 201.39 By MS/MS 6 0 1 1 0 0 0 3666 523 3795 8522 7035 7035 1 0 0 ELYPVEFR IPITLFMDLQAVLPRELYPVEFRNLLKWYA LQAVLPRELYPVEFRNLLKWYAKEFKDPLL R E L F R N 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 8 0 1051.5338 Q5BJF2 Q5BJF2 37 44 TMEM97 Transmembrane protein 97 yes yes 2 0.032104 89.296 By MS/MS 9.5 0.5 1 1 2 2969700 2969700 0 3667 1598 3796 8523;8524 7036 7036 1 70240 0 EMAIPVLEAR QSVRQALHSGQNQLKEMAIPVLEARACAAA QNQLKEMAIPVLEARACAAAGQSGLMALYE K E M A R A 2 1 0 0 0 0 2 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 10 0 1127.6009 P54886 P54886 150 159 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0092438 96.034 By MS/MS By matching 4.75 0.433 1 3 3 1 5463700 5394700 69046 3668 1048 3797;3798 8525;8526;8527;8528 7037;7038 7038 579 2 70510 57984 EMDEAATAEER EKDKDDDEVFEKKQKEMDEAATAEERGRLK KKQKEMDEAATAEERGRLKEELEEARDIAR K E M E R G 3 1 0 1 0 0 4 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 11 0 1250.5085 Q04637 Q04637 867 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 5.9289E-13 226.09 By MS/MS 2 0 3 3 17688000 17688000 0 3669 1291 3799;3800 8529;8530;8531 7039;7040;7041 7041 771 3 5982900 0 EMDEAATAEERGR EKDKDDDEVFEKKQKEMDEAATAEERGRLK QKEMDEAATAEERGRLKEELEEARDIARRR K E M G R L 3 2 0 1 0 0 4 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 13 1 1463.6311 Q04637 Q04637 867 879 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0012992 156.16 By MS/MS 2 0 2 2 1679200 1679200 0 3670 1291 3801;3802 8532;8533 7042;7043 7043 771 2 567980 0 EMDRETLIDVAR KEKALQFLEEVKVSREMDRETLIDVARTSL VSREMDRETLIDVARTSLRTKVHAELADVL R E M A R T 1 2 0 2 0 0 2 0 0 1 1 0 1 0 0 0 1 0 0 1 0 0 12 1 1446.7137 P40227 P40227 142 153 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 1.175E-08 223.31 By MS/MS By matching 6.69 1.26 2 5 3 1 2 12 1 127540000 127500000 42042 3671 858 3803;3804 8534;8535;8536;8537;8538;8539;8540;8541;8542;8543;8544;8545;8546 7044;7045;7046;7047;7048;7049;7050;7051;7052;7053 7046 441 10 956910 43081 EMDVVSQHK AGMLGLLVQFCTSHKEMDVVSQHKSALLDF FCTSHKEMDVVSQHKSALLDFYMKNILMSK K E M H K S 0 0 0 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 0 2 0 0 9 0 1071.5019 Q92616 Q92616 212 220 GCN1L1 Translational activator GCN1 yes yes 2 0.05048 75.738 By MS/MS 2 0 1 1 473400 473400 0 3672 2064 3805 8547 7054 7054 1 160120 0 EMEAELEDERKQR EQSEEKKKQLVRQVREMEAELEDERKQRSM VREMEAELEDERKQRSMAVAARKKLEMDLK R E M Q R S 1 2 0 1 0 1 5 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 13 2 1661.7679 P35579 P35579 1593 1605 MYH9 Myosin-9 yes yes 3 0.0050651 100.82 By MS/MS 2 0 1 1 898540 898540 0 3673 824 3806 8548 7055 7055 1 303920 0 EMENIIATVR ATEEDPKQWLNMDEREMENIIATVRDSNLK NMDEREMENIIATVRDSNLKLTLAFGIGMH R E M V R D 1 1 1 0 0 0 2 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1174.6016 Q8N3C0 Q8N3C0 1595 1604 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.052946 70.908 By MS/MS 2 0.816 1 1 1 3 224810 224810 0 3674 1911 3807 8549;8550;8551 7056 7056 1 35219 0 EMGTPDVR RAPRALKEIRKFAMKEMGTPDVRIDTRLNK IRKFAMKEMGTPDVRIDTRLNKAVWAKGIR K E M V R I 0 1 0 1 0 0 1 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 8 0 903.41202 P62899 P62899 56 63 RPL31 60S ribosomal protein L31 yes yes 2 0.022754 95.741 By MS/MS 9.5 0.5 1 1 2 522470 522470 0 3675 1183 3808 8552;8553 7057 7057 685 1 22789 0 EMLQQSK RGVVDSEDLPLNISREMLQQSKILKVIRKN DLPLNISREMLQQSKILKVIRKNIVKKCLE R E M S K I 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 7 0 862.42185 P07900;P08238;Q58FF7 P08238 393 399 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 0.043896 94.262 By MS/MS 4 0.816 1 1 1 3 9183500 9183500 0 3676 521;513 3809 8554;8555;8556 7058 7058 1 774930 0 EMNPALGIDCLHK NPIQTMTEVRARQVKEMNPALGIDCLHKGT VKEMNPALGIDCLHKGTNDMKQQHVIETLI K E M H K G 1 0 1 1 1 0 1 1 1 1 2 1 1 0 1 0 0 0 0 0 0 0 13 0 1496.7116 P48643 P48643 484 496 CCT5 T-complex protein 1 subunit epsilon yes yes 2 3.3315E-12 271.21 By MS/MS 6 0 1 1 4211500 4211500 0 3677 940 3810 8557 7059 7059 1 28951 0 EMQDLGGGER CIDNSGVYTNEYGGREMQDLGGGERMTGFE EYGGREMQDLGGGERMTGFELTEGVKTSGM R E M E R M 0 1 0 1 0 1 2 3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1090.4713 Q02413 Q02413 641 650 DSG1 Desmoglein-1 yes yes 2 0.0011037 137.05 By MS/MS 3.5 0.5 1 1 2 420690 0 420690 3678 1277 3811 8558;8559 7060 7060 1 0 115410 EMTADVIELK LMMASESTLLAQEPREMTADVIELKGKFLI AQEPREMTADVIELKGKFLINLEGGDIREE R E M L K G 1 0 0 1 0 0 2 0 0 1 1 1 1 0 0 0 1 0 0 1 0 0 10 0 1147.5795 Q9NSE4 Q9NSE4 948 957 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00044964 134.26 By MS/MS 4 0 2 2 1139100 1139100 0 3679 2570 3812;3813 8560;8561 7061;7062 7061 1113 2 107200 0 EMVFVAEQGVMADK ALRYERAVSMHNAAREMVFVAEQGVMADKN REMVFVAEQGVMADKNRLDPTWQEMLNHAT R E M D K N 2 0 0 1 0 1 2 1 0 0 0 1 2 1 0 0 0 0 0 3 0 0 14 0 1552.7266 Q7L8J4 Q7L8J4 149 162 SH3BP5L SH3 domain-binding protein 5-like yes yes 2 0.036598 73.499 By MS/MS 6 0 1 1 193060 193060 0 3680 1770 3814 8562 7063 7063 935 1 1327.1 0 EMVPEFVVPDLTGFK GIGFLTSGWRFVQIKEMVPEFVVPDLTGFK EMVPEFVVPDLTGFKLKPYVSYLAPESEET K E M F K L 0 0 0 1 0 0 2 1 0 0 1 1 1 2 2 0 1 0 0 3 0 0 15 0 1706.8589 Q8IXM3 Q8IXM3 55 69 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.00034569 147.26 By MS/MS 10 0 1 1 111190 111190 0 3681 1878 3815 8563 7064;7065;7066 7066 955 3 5992.5 0 ENADIIREQIR LRVETEARARAKAERENADIIREQIRLKAS KAERENADIIREQIRLKASEHRQTVLESIR R E N I R L 1 2 1 1 0 1 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 11 1 1355.7157 Q9NVI7;Q5T9A4 Q5T9A4 202 212 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 0.0027169 130.56 By MS/MS 5.5 0.5 1 1 2 11493000 11493000 0 3682 2598;1638 3816 8564;8565 7067 7067 1 108120 0 ENAGEDPGLAR PGSGNPCHEASAAQKENAGEDPGLARQAPK AAQKENAGEDPGLARQAPKPRKQRSSLLEK K E N A R Q 2 1 1 1 0 0 2 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 11 0 1127.5207 P81605 P81605 43 53 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 2 0.0016205 125.68 By MS/MS By MS/MS 5.53 3.18 2 2 1 2 1 2 1 2 2 6 9 3927600 2244000 1683600 3683 1228 3817 8566;8567;8568;8569;8570;8571;8572;8573;8574;8575;8576;8577;8578;8579;8580 7068;7069;7070;7071;7072;7073;7074;7075 7074 8 109460 1791400 ENALLELSK KIYQWINELSSPETRENALLELSKKRESVP SSPETRENALLELSKKRESVPDLAPMLWHS R E N S K K 1 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1015.555 Q92600 Q92600 36 44 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 0.011365 98.048 By MS/MS By matching 8 0 2 1 1 2609900 2593000 16915 3684 2060 3818 8581;8582 7076 7076 1 32736 22826 ENAPAIIFIDEIDAIATK GEGPRMVRDVFRLAKENAPAIIFIDEIDAI PAIIFIDEIDAIATKRFDAQTGADREVQRI K E N T K R 4 0 1 2 0 0 2 0 0 5 0 1 0 1 1 0 1 0 0 0 0 0 18 0 1943.0252 P43686 P43686 256 273 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.00058581 117.48 By MS/MS 6 0 1 1 112070 112070 0 3685 900 3819 8583 7077 7077 1 770.42 0 ENAYDLEANLAVLK ENLATLERYVETQAKENAYDLEANLAVLKL KENAYDLEANLAVLKLYQFNPAFFQTTVTA K E N L K L 3 0 2 1 0 0 2 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1561.7988 Q9UBQ5 Q9UBQ5 39 52 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 1.0378E-23 304.38 By MS/MS 8.67 0.471 1 2 3 18352000 18352000 0 3686 2703 3820 8584;8585;8586 7078;7079;7080;7081 7081 4 349710 0 ENCILNLLTEK VKDAHWFYDTPGITKENCILNLLTEKEVNI GITKENCILNLLTEKEVNIVLPTQSIVPRT K E N E K E 0 0 2 0 1 0 2 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 11 0 1345.6912 Q8NC60 Q8NC60 503 513 NOA1 Nitric oxide-associated protein 1 yes yes 2 2.7519E-13 238.01 By MS/MS 5 0 1 1 407810 407810 0 3687 1949 3821 8587 7082 7082 1 4090.2 0 ENDAVTIQVLNQLIQK LFIEILNRYIYFYEKENDAVTIQVLNQLIQ NDAVTIQVLNQLIQKIREDLPNLESSEETE K E N Q K I 1 0 2 1 0 3 1 0 0 2 2 1 0 0 0 0 1 0 0 2 0 0 16 0 1824.9945 Q96QK1 Q96QK1 734 749 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00010401 185.57 By MS/MS 5 0 1 1 66266 66266 0 3688 2217 3822 8588 7083 7083 1 664.61 0 ENDFDRLVLQYAPSA DAHRSHPFIKEYQAKENDFDRLVLQYAPSA ENDFDRLVLQYAPSA_______________ K E N S A - 2 1 1 2 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 15 1 1736.837 O14579 O14579 294 308 COPE Coatomer subunit epsilon yes yes 2 0.002574 150.46 By MS/MS 8 0 1 1 827390 827390 0 3689 127 3823 8589 7084 7084 1 10446 0 ENDYYTPTGEFR MVRIGGSTDTGKHIKENDYYTPTGEFRVDR HIKENDYYTPTGEFRVDREGSPVLLNCLMY K E N F R V 0 1 1 1 0 0 2 1 0 0 0 0 0 1 1 0 2 0 2 0 0 0 12 0 1490.6314 P46977 P46977 614 625 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 6.8401E-09 218.55 By MS/MS 3 1.41 1 1 1 1 1 5 4823500 4823500 0 3690 923 3824 8590;8591;8592;8593;8594 7085;7086;7087;7088 7086 4 991310 0 ENEFSFEDNAIR VVTYVGDKDSRAIIRENEFSFEDNAIRGGK IIRENEFSFEDNAIRGGKKASRMKKEASVK R E N I R G 1 1 2 1 0 0 3 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 12 0 1469.6423 Q14839;Q8TDI0 Q14839 818 829 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 1.4449E-08 242.35 By MS/MS 2 0.816 1 1 1 3 1425500 1425500 0 3691 1459 3825 8595;8596;8597 7089;7090 7090 2 437880 0 ENEVQSLHSK HEAAQQDLQSKFVAKENEVQSLHSKLTDTL KFVAKENEVQSLHSKLTDTLVSKQQLEQRL K E N S K L 0 0 1 0 0 1 2 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1169.5677 Q86UP2 Q86UP2 526 535 KTN1 Kinectin yes yes 2 0.051719 71.501 By MS/MS By matching 6.33 0.471 2 1 2 1 22329000 22263000 66742 3692 1823 3826 8598;8599;8600 7091 7091 1 176620 68392 ENFAGEATLQR QGTSKIDDIWNLEVKENFAGEATLQRIYSL LEVKENFAGEATLQRIYSLWEHSTKNHLQL K E N Q R I 2 1 1 0 0 1 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1234.5942 P04114 P04114 3548 3558 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 1.5516E-06 183.85 By MS/MS 7 0.816 1 1 1 3 2233800 2233800 0 3693 468 3827 8601;8602;8603 7092;7093;7094 7094 2 22141 0 ENFPNFLSACDK RDDKIEKPSLLTMMKENFPNFLSACDKKGT MMKENFPNFLSACDKKGTNYLADVFEKKDK K E N D K K 1 0 2 1 1 0 1 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 12 0 1440.6344 P31151;Q86SG5 P31151 38 49 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 2 0.00063124 132.03 By MS/MS 10 0 1 1 104150 104150 0 3694 784 3828 8604 7095 7095 1 5613.5 0 ENGADIFLYNANR LWLTLSLNSSSTGNKENGADIFLYNANRIP NKENGADIFLYNANRIPVISLNQASITSFL K E N N R I 2 1 3 1 0 0 1 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 13 0 1495.7056 Q9NR09 Q9NR09 2678 2690 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 1.809E-05 190.57 By MS/MS 1 0 1 1 108120 108120 0 3695 2543 3829 8605 7096;7097 7096 2 26054 0 ENGAFTVLVDNYVK GKKYRPLFDYFLKCKENGAFTVLVDNYVKE KENGAFTVLVDNYVKEEEGTGVVHQAPYFG K E N V K E 1 0 2 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 3 0 0 14 0 1567.7882 P41252 P41252 301 314 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.01219 89.805 By MS/MS 3 0 1 1 51137 51137 0 3696 871 3830 8606 7098 7098 0 935.66 0 ENGELLPILR KGELVGGLDIVKELKENGELLPILRGEN__ VKELKENGELLPILRGEN____________ K E N L R G 0 1 1 0 0 0 2 1 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1152.6503 O76003 O76003 323 332 GLRX3 Glutaredoxin-3 yes yes 2 0.0008733 126.07 By MS/MS 7 0 1 1 219960 219960 0 3697 358 3831 8607 7099 7099 1 3453 0 ENGELLPILRGEN KGELVGGLDIVKELKENGELLPILRGEN__ LKENGELLPILRGEN_______________ K E N E N - 0 1 2 0 0 0 3 2 0 1 3 0 0 0 1 0 0 0 0 0 0 0 13 1 1452.7573 O76003 O76003 323 335 GLRX3 Glutaredoxin-3 yes yes 2 0.0012075 158.08 By MS/MS 7 0 1 1 194240 194240 0 3698 358 3832 8608 7100 7100 1 3049.2 0 ENGLPLEYQEK PPSPQYKKIICMGAKENGLPLEYQEKLKAI MGAKENGLPLEYQEKLKAIEPNDYTGKVSE K E N E K L 0 0 1 0 0 1 3 1 0 0 2 1 0 0 1 0 0 0 1 0 0 0 11 0 1318.6405 O75223 O75223 149 159 GGCT Gamma-glutamylcyclotransferase yes yes 2 0.019186 99.788 By MS/MS 3 0 1 1 392550 0 392550 3699 306 3833 8609 7101 7101 1 0 49966 ENGQPQNCGGQWR NPCSQSYSQRGYGARENGQPQNCGGQWRTG ARENGQPQNCGGQWRTGSSQSSCCGQYGSG R E N W R T 0 1 2 0 1 3 1 3 0 0 0 0 0 0 1 0 0 1 0 0 0 0 13 0 1529.643 CON__Q5D862;Q5D862 CON__Q5D862 359 371 FLG2 Filaggrin-2 yes no 2 0.00048176 153.1 By matching By MS/MS 4.78 2.94 1 2 1 1 1 1 1 1 1 8 579330 59072 520260 + 3700 67 3834 8610;8611;8612;8613;8614;8615;8616;8617;8618 7102;7103;7104;7105;7106;7107;7108;7109;7110 7106 9 19980 494360 ENGVYLIDVK TEIDQDKYAVRFIPRENGVYLIDVKFNGTH RFIPRENGVYLIDVKFNGTHIPGSPFKIRV R E N V K F 0 0 1 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 1 2 0 0 10 0 1148.6077 P21333 P21333 2396 2405 FLNA Filamin-A yes yes 2 0.01814 102.06 By MS/MS 2 0.816 1 1 1 3 310450 310450 0 3701 677 3835 8619;8620;8621 7111;7112 7111 0 80741 0 ENINQKPVVLR LVLMHWRDRMGIAQKENINQKPVVLRKRRQ IAQKENINQKPVVLRKRRQRIKIEANWDLF K E N L R K 0 1 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 11 1 1308.7514 O75165 O75165 736 746 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0018003 134.26 By MS/MS 2 0 1 1 357740 357740 0 3702 302 3836 8622 7113 7113 1 121000 0 ENITIVDISR ______________________________ KSNNKENITIVDISRKINQLPEAERNLLEN K E N S R K 0 1 1 1 0 0 1 0 0 3 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 Q9H061 Q9H061 10 19 TMEM126A Transmembrane protein 126A yes yes 2 0.00012779 152.04 By MS/MS 9.5 0.5 1 1 2 612990 612990 0 3703 2401 3837 8623;8624 7114 7114 1 17717 0 ENKITITNDKGR NGILNVSAVDKSTGKENKITITNDKGRLSK TGKENKITITNDKGRLSKEDIERMVQEAEK K E N G R L 0 1 2 1 0 0 1 1 0 2 0 2 0 0 0 0 2 0 0 0 0 0 12 2 1387.7419 P11142;P54652 P11142 498 509 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.041526 123.51 By MS/MS 5 0 1 1 0 0 0 3704 572 3838 8625 7115 7115 1 0 0 ENLATVEGNFASIDER KDNTTLLTQVQTTMRENLATVEGNFASIDE NLATVEGNFASIDERMKKLGK_________ R E N E R M 2 1 2 1 0 0 3 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 16 0 1763.8326 Q13561 Q13561 380 395 DCTN2 Dynactin subunit 2 yes yes 2 6.0453E-44 327.94 By MS/MS 6.5 0.5 1 1 2 12700000 12700000 0 3705 1397 3839 8626;8627 7116 7116 1 88771 0 ENLEEEAIIMK LLQAETDRRTLQMLRENLEEEAIIMKDVPD QMLRENLEEEAIIMKDVPDWKVGESVFHTT R E N M K D 1 0 1 0 0 0 4 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 11 0 1317.6486 Q9P0J0 Q9P0J0 89 99 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2 1.5062E-18 256.91 By MS/MS 10 0 2 2 1827500 1827500 0 3706 2664 3840;3841 8628;8629 7117;7118 7117 1132 2 98498 0 ENLGVALEIDGLEEK ______________________________ ENLGVALEIDGLEEKLSQCRRDLEAVNSRL R E N E K L 1 0 1 1 0 0 4 2 0 1 3 1 0 0 0 0 0 0 0 1 0 0 15 0 1627.8305 Q9P0B6 Q9P0B6 7 21 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 9.1685E-05 214.42 By MS/MS 10 0 1 1 58273 58273 0 3707 2662 3842 8630 7119 7119 1 3140.7 0 ENLISALEEAK VVTHGGRVLAVTAIRENLISALEEAKKGLA TAIRENLISALEEAKKGLAAIKFEGAIYRK R E N A K K 2 0 1 0 0 0 3 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1215.6347 P22102 P22102 394 404 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00038179 133.91 By MS/MS 4 0 1 1 186570 186570 0 3708 688 3843 8631 7120 7120 1 17557 0 ENLKAAQEEYVKR RALQASALKAWGGKKENLKAAQEEYVKRAL KKENLKAAQEEYVKRALANSLACQGKYTPS K E N K R A 2 1 1 0 0 1 3 0 0 0 1 2 0 0 0 0 0 0 1 1 0 0 13 2 1576.8209 P04075 P04075 319 331 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.0018191 133.32 By MS/MS 7 0 1 1 730670 730670 0 3709 467 3844 8632 7121 7121 1 11470 0 ENLLDFIK KFDEGRNNFEGEVTKENLLDFIKHNQLPLV FEGEVTKENLLDFIKHNQLPLVIEFTEQTA K E N I K H 0 0 1 1 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 8 0 990.5386 P07237 P07237 223 230 P4HB Protein disulfide-isomerase yes yes 2 0.0046706 127.02 By MS/MS 6 0 1 1 305020 305020 0 3710 507 3845 8633 7122 7122 1 2096.8 0 ENLSYDLVPLK FHGRAFNDPFIQKEKENLSYDLVPLKNGGV QKEKENLSYDLVPLKNGGVGIKVMYMGEEH K E N L K N 0 0 1 1 0 0 1 0 0 0 3 1 0 0 1 1 0 0 1 1 0 0 11 0 1289.6867 Q92598 Q92598 85 95 HSPH1 Heat shock protein 105 kDa yes yes 2 0.0084913 94.692 By MS/MS 4 0 1 1 437460 437460 0 3711 2059 3846 8634 7123 7123 1 41168 0 ENLTELSGGQR LDGLEFKVALGNTWKENLTELSGGQRSLVA NTWKENLTELSGGQRSLVALSLILSMLLFK K E N Q R S 0 1 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1202.5891 O95347 O95347 1080 1090 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 9.2528E-05 152.54 By MS/MS 3 0 1 1 1116300 1116300 0 3712 405 3847 8635 7124 7124 1 20425 0 ENNVVFNR LHKDSKWYQQWKDFKENNVVFNRFFEMKMK QQWKDFKENNVVFNRFFEMKMKYDESDNAF K E N N R F 0 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 990.48829 O43615 O43615 250 257 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00774 113.26 By MS/MS 7 0 1 1 1236400 1236400 0 3713 221 3848 8636 7125 7125 1 19409 0 ENPCQEQGDVIQIK RPEKALILGFMAGSRENPCQEQGDVIQIKL RENPCQEQGDVIQIKLSEHTEDLPKADGQG R E N I K L 0 0 1 1 1 3 2 1 0 2 0 1 0 0 1 0 0 0 0 1 0 0 14 0 1656.7777 Q9H3P2 Q9H3P2 468 481 NELFA Negative elongation factor A yes yes 2 2.3874E-07 213.84 By MS/MS 5 0 1 1 1312700 1312700 0 3714 2439 3849 8637 7126 7126 1 13166 0 ENPGSGEYDFR GSEPGKQGTVYAQVKENPGSGEYDFRYIFV AQVKENPGSGEYDFRYIFVEIESYPRRTII K E N F R Y 0 1 1 1 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 0 0 0 11 0 1269.5262 Q9BVV7 Q9BVV7 214 224 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.00018125 144.77 By MS/MS 9.5 0.5 1 1 2 2596900 2596900 0 3715 2341 3850 8638;8639 7127 7127 1 53902 0 ENPLLPEEEEQR EFENRTRNVDVYDKRENPLLPEEEEQRAIA DKRENPLLPEEEEQRAIAKIKMLGNIKFIG R E N Q R A 0 1 1 0 0 1 5 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 12 0 1481.6998 P78344 P78344 189 200 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0052035 114.89 By MS/MS 4.5 0.5 1 1 2 6740300 6740300 0 3716 1219 3851 8640;8641 7128 7128 1 582580 0 ENPLLPEEEEQRAIAK EFENRTRNVDVYDKRENPLLPEEEEQRAIA NPLLPEEEEQRAIAKIKMLGNIKFIGELGK R E N A K I 2 1 1 0 0 1 5 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 16 1 1864.9531 P78344 P78344 189 204 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 2.0761E-06 181.98 By MS/MS 4.5 0.5 1 1 2 3245100 3245100 0 3717 1219 3852 8642;8643 7129 7129 1 274800 0 ENQEGAANVNVR HTLLEDYQIVDNSQRENQEGAANVNVRGEK SQRENQEGAANVNVRGEKDEQTKEVKEAKK R E N V R G 2 1 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 12 0 1299.6167 Q8N0X7 Q8N0X7 637 648 SPG20 Spartin yes yes 2 5.0916E-06 187.42 By MS/MS 4.5 0.5 1 1 2 941680 941680 0 3718 1897 3853 8644;8645 7130 7130 1 52825 0 ENQTAVDVFR LAESWNAAFLESSAKENQTAVDVFRRIILE ESSAKENQTAVDVFRRIILEAEKMDGAASQ K E N F R R 1 1 1 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 10 0 1177.5728 Q15382 Q15382 152 161 RHEB GTP-binding protein Rheb yes yes 2 0.0010339 122.96 By MS/MS 9.5 0.5 1 1 2 543600 543600 0 3719 1504 3854 8646;8647 7131 7131 1 15233 0 ENQVSIECDTTCK PCKRIKKELQCNKVRENQVSIECDTTCKEM VRENQVSIECDTTCKEMKRKASEIKEAEAK R E N C K E 0 0 1 1 2 1 2 0 0 1 0 1 0 0 0 1 2 0 0 1 0 0 13 0 1582.6603 Q6ZNB6 Q6ZNB6 816 828 NFXL1 NF-X1-type zinc finger protein NFXL1 yes yes 2 0.00022007 160.67 By MS/MS 1 0 1 1 87595 87595 0 3720 1741 3855 8648 7132 7132 1 21108 0 ENSETVVTGSLDDLVK HDDAIWSVAWGTNKKENSETVVTGSLDDLV NSETVVTGSLDDLVKVWKWRDERLDLQWSL K E N V K V 0 0 1 2 0 0 2 1 0 0 2 1 0 0 0 2 2 0 0 3 0 0 16 0 1704.8418 Q9GZS3 Q9GZS3 30 45 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2 2.1956E-44 334.53 By MS/MS 8 0 1 1 3142800 3142800 0 3721 2397 3856 8649 7133 7133 1 39678 0 ENSFYVDTVR HITKVEERLTTICQRENSFYVDTVRAFRDR TICQRENSFYVDTVRAFRDRRYEFKGLHKV R E N V R A 0 1 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 2 0 0 10 0 1228.5724 Q07864 Q07864 750 759 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.030752 94.409 By MS/MS 2 0 1 1 217460 217460 0 3722 1302 3857 8650 7134 7134 1 73554 0 ENTAAENGLTVR RNWIWTSYIINQAKKENTAAENGLTVRLQT AKKENTAAENGLTVRLQTFLSKRPMPLSAR K E N V R L 2 1 2 0 0 0 2 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1273.6262 Q12789 Q12789 1144 1155 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 2.8436E-06 194.48 By MS/MS 2 0.816 1 1 1 3 634360 634360 0 3723 1328 3858 8651;8652;8653 7135 7135 1 167090 0 ENVATTDTLESTTVGTSV KEVLLFPAMKPEDKKENVATTDTLESTTVG ATTDTLESTTVGTSV_______________ K E N S V - 1 0 1 1 0 0 2 1 0 0 1 0 0 0 0 2 6 0 0 3 0 0 18 0 1823.8636 Q15046 Q15046 580 597 KARS Lysine--tRNA ligase yes yes 2 1.9794E-24 279.77 By MS/MS 5 0 1 1 1615800 1615800 0 3724 1481 3859 8654 7136 7136 1 16206 0 ENVDYIIQELR IMKHLKAICFLRPTKENVDYIIQELRRPKY RPTKENVDYIIQELRRPKYTIYFIYFSNVI K E N L R R 0 1 1 1 0 1 2 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1390.7092 Q9NRW7 Q9NRW7 77 87 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 4.7296E-13 247.31 By MS/MS 5 0 1 1 677830 677830 0 3725 2559 3860 8655 7137 7137 1 6798.3 0 ENVFLSYQDK DIEWMQVNSDPAHHRENVFLSYQDKRINHG PAHHRENVFLSYQDKRINHGSLPHLQQRVR R E N D K R 0 0 1 1 0 1 1 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1241.5928 P0DPA2 P0DPA2 74 83 yes yes 2 1.0041E-05 169.93 By MS/MS 10 0 1 1 254500 0 254500 3726 554 3861 8656 7138 7138 1 0 325840 ENVFLSYQDKR DIEWMQVNSDPAHHRENVFLSYQDKRINHG AHHRENVFLSYQDKRINHGSLPHLQQRVRF R E N K R I 0 1 1 1 0 1 1 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 11 1 1397.6939 P0DPA2 P0DPA2 74 84 yes yes 2 0.00098853 133.75 By MS/MS 10 0 1 1 73569 0 73569 3727 554 3862 8657 7139 7139 0 0 94189 ENVLIGDGAGFK SDTRGIVFEDVKVPKENVLIGDGAGFKVAM VPKENVLIGDGAGFKVAMGAFDKTRPVVAA K E N F K V 1 0 1 1 0 0 1 3 0 1 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1218.6245 P11310 P11310 260 271 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0075516 96.113 By MS/MS 7 0 1 1 1211200 1211200 0 3728 577 3863 8658 7140 7140 1 19014 0 ENVLLSSELQR KEWNALETECHSLKRENVLLSSELQRQEKE SLKRENVLLSSELQRQEKELHNSQKQSLEL R E N Q R Q 0 1 1 0 0 1 2 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1286.683 Q14BN4 Q14BN4 679 689 SLMAP Sarcolemmal membrane-associated protein yes yes 2 3.242E-07 199.33 By MS/MS 4 0 1 1 3070800 3070800 0 3729 1465 3864 8659 7141 7141 1 288980 0 ENVNLAQIR DLIFAFDEIVALGYRENVNLAQIRTFTEMD VALGYRENVNLAQIRTFTEMDSHEEKVFRA R E N I R T 1 1 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1055.5724 P48444 P48444 123 131 ARCN1 Coatomer subunit delta yes yes 2 8.67E-07 182.53 By MS/MS By matching 4.33 2.36 1 2 2 1 7348300 7301200 47173 3730 934 3865 8660;8661;8662 7142;7143 7143 2 79557 48339 ENVVVIHPDFR DGRRIVANSANVNGRENVVVIHPDFRMIVL VNGRENVVVIHPDFRMIVLANRPGFPFLGN R E N F R M 0 1 1 1 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 3 0 0 11 0 1323.6935 A3KMH1 A3KMH1 888 898 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 1.848E-07 201.09 By MS/MS 2 0 1 1 406740 406740 0 3731 14 3866 8663 7144 7144 1 137580 0 ENYLEENLLYAPSLR AGWEEVLRWQDRSSRENYLEENLLYAPSLR ENYLEENLLYAPSLRFIHGLIKQFSENIYE R E N L R F 1 1 2 0 0 0 3 0 0 0 4 0 0 0 1 1 0 0 2 0 0 0 15 0 1822.9101 Q7L2E3 Q7L2E3 959 973 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0044844 124.21 By MS/MS 4 0.816 1 1 1 3 246550 246550 0 3732 1761 3867 8664;8665;8666 7145 7145 1 12999 0 EPELGLEELLR CSLVTDFPQGVRECREPELGLEELLRHRCQ RECREPELGLEELLRHRCQLLQQHEEYQEE R E P L R H 0 1 0 0 0 0 4 1 0 0 4 0 0 0 1 0 0 0 0 0 0 0 11 0 1296.6925 Q9NZL4 Q9NZL4 312 322 HSPBP1 Hsp70-binding protein 1 yes yes 2 0.028924 82.749 By MS/MS 7.5 0.5 1 1 2 323180 323180 0 3733 2651 3868 8667;8668 7146 7146 1 4840.2 0 EPENELTK SSQVLYKLEQSKSKREPENELTKQHPSVSL EQSKSKREPENELTKQHPSVSLQQYKNFMS R E P T K Q 0 0 1 0 0 0 3 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 8 0 958.46074 Q6YHU6 Q6YHU6 711 718 THADA Thyroid adenoma-associated protein yes yes 2 0.043519 95.741 By MS/MS 2 0 1 1 0 0 0 3734 1739 3869 8669 7147 7147 1 0 0 EPEVLSTMAIIVNK DAVLIDYQRNVPAAREPEVLSTMAIIVNKL REPEVLSTMAIIVNKLGGHITAEIPQIFDA R E P N K L 1 0 1 0 0 0 2 0 0 2 1 1 1 0 1 1 1 0 0 2 0 0 14 0 1542.8327 O14980 O14980 797 810 XPO1 Exportin-1 yes yes 2 0.00044281 145.28 By MS/MS 4 0 1 1 197240 197240 0 3735 153 3870 8670 7148 7148 1 18561 0 EPFLQQLK PVVPNYDNVHPNYHKEPFLQQLKVFSDEVQ VHPNYHKEPFLQQLKVFSDEVQQQAQLSTI K E P L K V 0 0 0 0 0 2 1 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 8 0 1001.5546 Q9Y262 Q9Y262 438 445 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.03867 97.068 By MS/MS 5 0 1 1 3863200 3863200 0 3736 2814 3871 8671 7149 7149 1 38746 0 EPLINTYISVPK EQANDDARTFYIIEREPLINTYISVPKENS IEREPLINTYISVPKENSTLNCASFTAGIV R E P P K E 0 0 1 0 0 0 1 0 0 2 1 1 0 0 2 1 1 0 1 1 0 0 12 0 1372.7602 Q8IUR0 Q8IUR0 121 132 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.0013191 119.22 By MS/MS 8.5 0.5 1 1 2 266740 266740 0 3737 1859 3872 8672;8673 7150 7150 1 4336.8 0 EPLSLINVR ARPGPGVWDPNWDRREPLSLINVRKRNVES PNWDRREPLSLINVRKRNVESGEEELASKL R E P V R K 0 1 1 0 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 9 0 1039.6026 Q96HS1 Q96HS1 66 74 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.0027047 113.26 By MS/MS 8 0.816 1 1 1 3 24767000 24767000 0 3738 2168 3873 8674;8675;8676 7151;7152 7152 2 334680 0 EPPLYYGVCPVYEDVPAR PSDTDTYRAGATASKEPPLYYGVCPVYEDV LYYGVCPVYEDVPARNERIYVYENKKEALQ K E P A R N 1 1 0 1 1 0 2 1 0 0 1 0 0 0 4 0 0 0 3 3 0 0 18 0 2123.0034 Q86XL3 Q86XL3 195 212 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 1.6768E-05 217.46 By MS/MS 4 0 1 1 405200 405200 0 3739 1845 3874 8677 7153 7153 1 38132 0 EPPYGADVLR IHPDVVVNGGQDQSKEPPYGADVLRWWVAD QDQSKEPPYGADVLRWWVADSNVFTEVAIG K E P L R W 1 1 0 1 0 0 1 1 0 0 1 0 0 0 2 0 0 0 1 1 0 0 10 0 1115.5611 Q9NSE4 Q9NSE4 688 697 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.022249 85.731 By MS/MS 4 0.816 1 1 1 3 1997600 1997600 0 3740 2570 3875 8678;8679;8680 7154 7154 1 159990 0 EPSITQGNTEDQGSGPSETKPVVSISR ESPKEIKKPLVTGSKEPSITQGNTEDQGSG GSGPSETKPVVSISRTQLVYVVADLDKLQE K E P S R T 0 1 1 1 0 2 3 3 0 2 0 1 0 0 3 5 3 0 0 2 0 0 27 1 2799.3523 Q14746 Q14746 484 510 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 3 0.020439 55.846 By MS/MS 5 0 1 1 1946100 1946100 0 3741 1457 3876 8681 7155 7155 1 19518 0 EPSSVLVQPLR PRKLSYAEVCQKPPKEPSSVLVQPLRELRS KPPKEPSSVLVQPLRELRSNVVSPTKNEDN K E P L R E 0 1 0 0 0 1 1 0 0 0 2 0 0 0 2 2 0 0 0 2 0 0 11 0 1223.6874 Q71RC2 Q71RC2 629 639 LARP4 La-related protein 4 yes yes 2 0.041946 74.173 By MS/MS 4 0 1 1 993150 993150 0 3742 1750 3877 8682 7156 7156 1 93462 0 EPSTASGGGQLNR PGVPGAAGVGGAGGREPSTASGGGQLNRAG GREPSTASGGGQLNRAGSISTLDSLDFARY R E P N R A 1 1 1 0 0 1 1 3 0 0 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1272.6058 Q9P260 Q9P260 165 177 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 2 0.0026344 112.71 By MS/MS 3 0 1 1 513260 513260 0 3743 2678 3878 8683 7157 7157 1 9391.2 0 EPSYFEIPTK QSAAANEEVLFPFCREPSYFEIPTKEFQQP FPFCREPSYFEIPTKEFQQPSQITESTIHE R E P T K E 0 0 0 0 0 0 2 0 0 1 0 1 0 1 2 1 1 0 1 0 0 0 10 0 1209.5918 Q5SW79;Q9Y4F5 Q5SW79 237 246 CEP170;CEP170B Centrosomal protein of 170 kDa;Centrosomal protein of 170 kDa protein B no no 2 0.026283 83.783 By MS/MS 2.5 0.5 1 1 2 388450 388450 0 3744 1623;2894 3879 8684;8685 7158 7158 1 116580 0 EPVICTPVSSGFEK REPELPCGLAPAVSREPVICTPVSSGFEKS REPVICTPVSSGFEKSKVTINNKVILLKKE R E P E K S 0 0 0 0 1 0 2 1 0 1 0 1 0 1 2 2 1 0 0 2 0 0 14 0 1548.7494 Q8TEQ6 Q8TEQ6 802 815 GEMIN5 Gem-associated protein 5 yes yes 2 0.017713 85.924 By MS/MS 3.5 1.12 1 1 1 1 4 2808600 2808600 0 3745 2002 3880 8686;8687;8688;8689 7159;7160 7160 2 178630 0 EPVQLETLSIR MNTHLKAVKMTLKNREPVQLETLSIRGNNI LKNREPVQLETLSIRGNNIRYFILPDSLPL R E P I R G 0 1 0 0 0 1 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1283.7085 P62314 P62314 51 61 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 2 0.00018125 144.77 By MS/MS 10 0 1 1 779530 779530 0 3746 1155 3881 8690 7161 7161 1 42014 0 EPVVVETVEEK GTPCREFWSRFRKEKEPVVVETVEEKKEPI RKEKEPVVVETVEEKKEPILVCPPLRSRAY K E P E K K 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 1 0 0 4 0 0 11 0 1256.65 Q8N5N7 Q8N5N7 35 45 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2 0.0048081 104.42 By MS/MS 10 0 1 1 394200 394200 0 3747 1925 3882 8691 7162 7162 1 21246 0 EQADFALEALAK RIKVGRDYVQKAQTKEQADFALEALAKATY QTKEQADFALEALAKATYERLFRWLVLRLN K E Q A K A 4 0 0 1 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1304.6612 Q7Z406 Q7Z406 434 445 MYH14 Myosin-14 yes yes 2 4.7189E-09 220.82 By MS/MS By matching 2.75 0.829 2 1 1 3 1 2159100 2075400 83711 3748 1788 3883 8692;8693;8694;8695 7163;7164;7165 7163 3 621610 118380 EQADFAVEALAK RIKVGRDYVQKAQTKEQADFAVEALAKATY QTKEQADFAVEALAKATYERLFRWLVHRIN K E Q A K A 4 0 0 1 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1290.6456 P35580 P35580 415 426 MYH10 Myosin-10 no no 2 2.4333E-05 175.49 By MS/MS By matching 2.33 0.471 2 1 2 1 992660 931440 61220 3749 825 3884 8696;8697;8698 7166;7167 7166 2 315050 86577 EQAEEERYFR GAGSIREAGGAFGKREQAEEERYFRAQSRE AFGKREQAEEERYFRAQSREQLAALKKHHE R E Q F R A 1 2 0 0 0 1 4 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 10 1 1355.6106 Q9UII2 Q9UII2 51 60 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 0.054007 80.455 By MS/MS By matching 10 0 2 1 1 5651900 5515900 135990 3750 2743 3885 8699;8700 7168 7168 1 297290 174100 EQAELTGLR DGSLEKDRTLTPLGREQAELTGLRLASLGL LTPLGREQAELTGLRLASLGLKFNKIVHSS R E Q L R L 1 1 0 0 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1015.5298 Q96HS1 Q96HS1 126 134 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.0014637 128.12 By MS/MS By matching 8.8 0.748 2 2 1 3 2 50723000 50391000 332020 3751 2168 3886 8701;8702;8703;8704;8705 7169;7170 7170 2 726340 482320 EQAKQEYQAQK HLDLVQLIQREQQQREQAKQEYQAQKAAKA QQQREQAKQEYQAQKAAKASA_________ R E Q Q K A 2 0 0 0 0 4 2 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 11 1 1349.6575 Q92552 Q92552 398 408 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 2.0084E-12 233.09 By MS/MS 7 0 1 1 2194700 2194700 0 3752 2054 3887 8706 7171 7171 1 34453 0 EQALAVSR PELPVPTGGPAVGAREQALAVSRNYLSQPR GPAVGAREQALAVSRNYLSQPRLTYKTVSG R E Q S R N 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 872.47158 P21281 P21281 30 37 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 0.042956 85.161 By MS/MS 6 0 1 1 2195500 2195500 0 3753 675 3888 8707 7172 7172 1 15092 0 EQALQLAQK AIIKEPIDIEEGIKKEQALQLAQKMGFPPN EEGIKKEQALQLAQKMGFPPNIVESAAENM K E Q Q K M 2 0 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1027.5662 Q9P2R7 Q9P2R7 217 225 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00081181 137.13 By MS/MS 7 0 1 1 4735000 4735000 0 3754 2690 3889 8708 7173 7173 1 74332 0 EQCCYNCGKPGHLAR GGHIAKDCKEPKREREQCCYNCGKPGHLAR EQCCYNCGKPGHLARDCDHADEQKCYSCGE R E Q A R D 1 1 1 0 3 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 0 0 15 1 1848.7818 P62633 P62633 95 109 CNBP Cellular nucleic acid-binding protein yes yes 3 0.0086093 88.101 By MS/MS 9.5 0.5 1 1 2 1985900 1985900 0 3755 1163 3890 8709;8710 7174 7174 1 54148 0 EQEAGLLQFLR TVRVKALFAISCLVREQEAGLLQFLRLDGF CLVREQEAGLLQFLRLDGFSVLMRAMQQQV R E Q L R L 1 1 0 0 0 2 2 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 11 0 1302.6932 Q9NZL4 Q9NZL4 218 228 HSPBP1 Hsp70-binding protein 1 yes yes 2 4.6483E-10 223.87 By MS/MS 7.5 0.5 1 1 2 945900 945900 0 3756 2651 3891 8711;8712 7175;7176;7177 7176 3 14114 0 EQEITAVQAR AAAGEAKVKKQLVAREQEITAVQARMQASY QLVAREQEITAVQARMQASYREHVKEVQQL R E Q A R M 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1143.5884 Q9P2E9 Q9P2E9 752 761 RRBP1 Ribosome-binding protein 1 yes yes 2 0.0025934 123.86 By MS/MS 2 0 1 1 0 0 0 3757 2682 3892 8713 7178 7178 1 0 0 EQEVNILKK TLDSTAAQQELRSKREQEVNILKKTLEEEA ELRSKREQEVNILKKTLEEEAKTHEAQIQE R E Q K K T 0 0 1 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1099.6237 P35579 P35579 1166 1174 MYH9 Myosin-9 yes yes 2 0.043378 95.741 By MS/MS By matching 2.33 0.471 2 1 2 1 1979900 1885500 94474 3758 824 3893 8714;8715;8716 7179 7179 1 539390 133600 EQFVEFR HDGNTDEPEWVKTEREQFVEFRDKNRDGKM PEWVKTEREQFVEFRDKNRDGKMDKEETKD R E Q F R D 0 1 0 0 0 1 2 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 7 0 953.46068 O43852 O43852 235 241 CALU Calumenin yes yes 2 0.017023 117.16 By MS/MS 7.5 0.5 1 1 2 4188400 4188400 0 3759 243 3894 8717;8718 7180 7180 1 64069 0 EQGFLSFWR KQYKGIIDCVVRIPKEQGFLSFWRGNLANV VVRIPKEQGFLSFWRGNLANVIRYFPTQAL K E Q W R G 0 1 0 0 0 1 1 1 0 0 1 0 0 2 0 1 0 1 0 0 0 0 9 0 1168.5665 P12235 P12235 64 72 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.010746 99.136 By MS/MS 8 0 1 1 151710 151710 0 3760 588 3895 8719 7181 7181 1 1915.3 0 EQGLKGTYQGLTATVLK PKYRGFFHGVREIVREQGLKGTYQGLTATV GLKGTYQGLTATVLKQGSNQAIRFFVMTSL R E Q L K Q 1 0 0 0 0 2 1 3 0 0 3 2 0 0 0 0 3 0 1 1 0 0 17 1 1805.9887 P53007 P53007 174 190 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.039522 63.31 By MS/MS 8 0 1 1 1343600 1343600 0 3761 1026 3896 8720 7182 7182 1 16963 0 EQGNIEEAVR PTHADSLNNLANIKREQGNIEEAVRLYRKA ANIKREQGNIEEAVRLYRKALEVFPEFAAA R E Q V R L 1 1 1 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 10 0 1143.552 O15294 O15294 339 348 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.0075696 99.802 By MS/MS 4 0 1 1 1185800 1185800 0 3762 179 3897 8721 7183 7183 1 111590 0 EQGPYETYEGSPVSK TIYYGALEASCDLAKEQGPYETYEGSPVSK EQGPYETYEGSPVSKGILQYDMWNVTPTDL K E Q S K G 0 0 0 0 0 1 3 2 0 0 0 1 0 0 2 2 1 0 2 1 0 0 15 0 1669.7471 P23921 P23921 549 563 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 2 6.8668E-12 246.63 By MS/MS 4.5 0.5 1 1 2 1393200 1393200 0 3763 711 3898 8722;8723 7184 7184 1 108670 0 EQGQAPITPQQGQALAK KKDLRAQPDTLRRLKEQGQAPITPQQGQAL GQAPITPQQGQALAKQIHAVRYLECSALQQ K E Q A K Q 3 0 0 0 0 5 1 2 0 1 1 1 0 0 2 0 1 0 0 0 0 0 17 0 1763.9166 P84095 P84095 131 147 RHOG Rho-related GTP-binding protein RhoG yes yes 2 1.6162E-05 201.09 By MS/MS 9 0 1 1 281690 281690 0 3764 1246 3899 8724 7185 7185 1 5543.7 0 EQGVEEHETLLLR TDDELNWLDHGRTLREQGVEEHETLLLRRK LREQGVEEHETLLLRRKFFYSDQNVDSRDP R E Q L R R 0 1 0 0 0 1 4 1 1 0 3 0 0 0 0 0 1 0 0 1 0 0 13 0 1551.7893 Q9Y490 Q9Y490 182 194 TLN1 Talin-1 yes yes 2 0.053634 72.2 By MS/MS 2 0 1 1 293360 293360 0 3765 2888 3900 8725 7186 7186 0 99225 0 EQGVLSFWR KQYKGIIDCVVRIPKEQGVLSFWRGNLANV VVRIPKEQGVLSFWRGNLANVIRYFPTQAL K E Q W R G 0 1 0 0 0 1 1 1 0 0 1 0 0 1 0 1 0 1 0 1 0 0 9 0 1120.5665 P05141;P12236 P05141 64 72 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 4.2706E-07 193.1 By MS/MS 5.73 2.83 1 1 1 1 1 1 1 2 1 1 11 77772000 77772000 0 3766 487;589 3901 8726;8727;8728;8729;8730;8731;8732;8733;8734;8735;8736 7187;7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198 7192 12 2051500 0 EQGVTFPSGDIQEQLIR YATILNAGTNTDGFKEQGVTFPSGDIQEQL GVTFPSGDIQEQLIRSLYQSAGVAPESFEY K E Q I R S 0 1 0 1 0 3 2 2 0 2 1 0 0 1 1 1 1 0 0 1 0 0 17 0 1915.964 P49327 P49327 258 274 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.9993E-17 263.72 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 2504000 2504000 0 3767 946 3902 8737;8738;8739;8740;8741;8742 7199;7200;7201 7201 3 318270 0 EQHQHSDLDSNQTHSSGTVTSSSSTANIDDLKK TDMLHSKLSQLRESREQHQHSDLDSNQTHS VTSSSSTANIDDLKKRLERIKSSRK_____ R E Q K K R 1 0 2 4 0 3 1 1 3 1 2 2 0 0 0 8 4 0 0 1 0 0 33 1 3553.6153 Q14008 Q14008 1990 2022 CKAP5 Cytoskeleton-associated protein 5 yes yes 4 0.0042268 54.581 By MS/MS 2 0 1 1 478350 478350 0 3768 1417 3903 8743 7202 7202 1 161800 0 EQIDNLATELCR DSHVHAVRESQVELREQIDNLATELCRINE ELREQIDNLATELCRINEDQKVALDLDPYV R E Q C R I 1 1 1 1 1 1 2 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1460.6929 O95295 O95295 56 67 SNAPIN SNARE-associated protein Snapin yes yes 2 1.5123E-12 234.39 By MS/MS 10 0 1 1 420280 420280 0 3769 402 3904 8744 7203 7203 1 22652 0 EQIKGGTGDEK VIQSTAVTTVSSGTKEQIKGGTGDEKKAKE SGTKEQIKGGTGDEKKAKEKIEKKGEKKEK K E Q E K K 0 0 0 1 0 1 2 3 0 1 0 2 0 0 0 0 1 0 0 0 0 0 11 1 1160.5673 Q12904 Q12904 111 121 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.0024555 131.62 By MS/MS 7 0 1 1 682820 682820 0 3770 1337 3905 8745 7204 7204 1 10719 0 EQIKGGTGDEKK VIQSTAVTTVSSGTKEQIKGGTGDEKKAKE GTKEQIKGGTGDEKKAKEKIEKKGEKKEKK K E Q K K A 0 0 0 1 0 1 2 3 0 1 0 3 0 0 0 0 1 0 0 0 0 0 12 2 1288.6623 Q12904 Q12904 111 122 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 2.3661E-05 175.65 By MS/MS 7 0 1 1 402740 402740 0 3771 1337 3906 8746 7205 7205 1 6322.3 0 EQIKTLNNK VKVDPEIQNVKAQEREQIKTLNNKFASFID VKAQEREQIKTLNNKFASFIDKVRFLEQQN R E Q N K F 0 0 2 0 0 1 1 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 9 1 1086.6033 CON__P13647;P13647;CON__P05787;P05787;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__Q9H552;CON__H-INV:HIT000292931;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q3TTY5;CON__Q5XKE5;Q5XKE5 CON__P35908v2 180 188 KRT5;KRT8;KRT84;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79 no no 2 2.3645E-08 184.49 By MS/MS By MS/MS 5.64 2.66 1 1 1 2 2 2 1 2 2 5 9 13006000 8952300 4053800 + 3772 55;52;44;56;40;74;48;65;68 3907 8747;8748;8749;8750;8751;8752;8753;8754;8755;8756;8757;8758;8759;8760 7206;7207;7208;7209;7210;7211;7212;7213;7214 7210 9 192990 2110200 EQISDIDDAVR RKGISLNPEQWSQLKEQISDIDDAVRKL__ SQLKEQISDIDDAVRKL_____________ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0010043 121.5 By MS/MS 9.5 0.5 1 1 2 689480 689480 0 3773 1040 3908 8761;8762 7215 7215 1 25222 0 EQISLYPEVK PSVAPRHPSTNSLLREQISLYPEVKGEIAR NSLLREQISLYPEVKGEIARKDEKLLSFLK R E Q V K G 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 10 0 1204.634 Q9P032 Q9P032 42 51 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 8.2571E-05 155.11 By MS/MS 9.5 0.5 1 1 2 5107000 5107000 0 3774 2660 3909 8763;8764 7216;7217 7217 2 106940 0 EQISLYPEVKGEIAR PSVAPRHPSTNSLLREQISLYPEVKGEIAR EQISLYPEVKGEIARKDEKLLSFLKDVYVD R E Q A R K 1 1 0 0 0 1 3 1 0 2 1 1 0 0 1 1 0 0 1 1 0 0 15 1 1730.9203 Q9P032 Q9P032 42 56 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 3 0.0231 72.815 By MS/MS 9 0 1 1 437640 437640 0 3775 2660 3910 8765 7218 7218 1 8612.8 0 EQIVPKPEEEVAQK YMSSPCHIEMILTEKEQIVPKPEEEVAQKK KEQIVPKPEEEVAQKKKISQKKLKKQKLMA K E Q Q K K 1 0 0 0 0 2 4 0 0 1 0 2 0 0 2 0 0 0 0 2 0 0 14 1 1622.8516 P18621 P18621 154 167 RPL17 60S ribosomal protein L17 yes yes 2 7.0991E-05 198.97 By MS/MS 9 0 1 1 1359400 1359400 0 3776 654 3911 8766 7219 7219 1 26753 0 EQKYEDGIALLR DYIKAVVKKAELLSREQKYEDGIALLRNAL LSREQKYEDGIALLRNALANQSDCVLHRIL R E Q L R N 1 1 0 1 0 1 2 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 12 1 1433.7514 Q9UJX3 Q9UJX3 489 500 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2;3 0.0051216 131.42 By MS/MS 5.33 0.471 2 1 3 4608800 4608800 0 3777 2752 3912 8767;8768;8769 7220;7221 7221 2 40634 0 EQLAIAEFAR LSIYLENYATSMGSREQLAIAEFARSLLVI SMGSREQLAIAEFARSLLVIPNTLAVNAAQ R E Q A R S 3 1 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 10 0 1146.6033 P17987 P17987 434 443 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.5071E-14 227.27 By MS/MS By MS/MS 5.3 2.76 1 1 1 1 1 2 1 1 1 9 1 159040000 158830000 212300 3778 648 3913 8770;8771;8772;8773;8774;8775;8776;8777;8778;8779 7222;7223;7224;7225;7226;7227;7228;7229;7230;7231;7232 7223 11 2249700 217540 EQLAQAVAR PPSVNRTEIVFTGEKEQLAQAVARIKKIYE VFTGEKEQLAQAVARIKKIYEEKKKKTTTI K E Q A R I 3 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 984.53524 Q00341 Q00341 275 283 HDLBP Vigilin yes yes 2 0.013996 93.429 By MS/MS 3 0 1 1 705030 705030 0 3779 1260 3914 8780 7233 7233 1 12900 0 EQLDMAGAR DELQENARETELELREQLDMAGARVREAQK TELELREQLDMAGARVREAQKRVEAAQETV R E Q A R V 2 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 9 0 989.46003 Q14203 Q14203 487 495 DCTN1 Dynactin subunit 1 yes yes 2 0.022987 87.639 By MS/MS 3 0 1 1 190350 190350 0 3780 1432 3915 8781 7234 7234 1 3482.8 0 EQLLQSNPVLEAFGNAK VAAVCGKGAEVNQVKEQLLQSNPVLEAFGN LLQSNPVLEAFGNAKTVRNDNSSRFGKYMD K E Q A K T 2 0 2 0 0 2 2 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 17 0 1856.9632 O43795;Q9UBC5 O43795 140 156 MYO1B;MYO1A Unconventional myosin-Ib;Unconventional myosin-Ia yes no 2 0.000299 194.86 By MS/MS 4 0 1 1 81341 81341 0 3781 235 3916 8782 7235;7236;7237 7236 3 7654.8 0 EQLQTEQDAPAATR QNIHPENQELVRVLREQLQTEQDAPAATRQ REQLQTEQDAPAATRQQFYTDMYCPICLHQ R E Q T R Q 3 1 0 1 0 3 2 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 14 0 1556.7431 Q96K19 Q96K19 65 78 RNF170 E3 ubiquitin-protein ligase RNF170 yes yes 2 2.1266E-11 241.35 By MS/MS 9 0 1 1 297790 297790 0 3782 2181 3917 8783 7238 7238 1 5860.5 0 EQLTEEAR IKGSLIITFDVDFPKEQLTEEAREGIKQLL FDVDFPKEQLTEEAREGIKQLLKQGSVQKV K E Q A R E 1 1 0 0 0 1 3 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 974.46689 Q9UBS4 Q9UBS4 329 336 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.023054 96.253 By MS/MS 7 0 1 1 839460 839460 0 3783 2704 3918 8784 7239 7239 1 13178 0 EQNIVFNAETYSNLIK LNQKKGAYDIFLNAKEQNIVFNAETYSNLI QNIVFNAETYSNLIKLLMSEDYFTQAMEVK K E Q I K L 1 0 3 0 0 1 2 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 16 0 1881.9472 P42704 P42704 1060 1075 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.0678E-43 320.01 By MS/MS 3.5 0.5 1 1 2 429860 429860 0 3784 886 3919 8785;8786 7240 7240 1 21559 0 EQQHVMEELFQSSFR QSPMLLELMTEVLCREQQHVMEELFQSSFR EQQHVMEELFQSSFRRIARRGSCVTQVGLL R E Q F R R 0 1 0 0 0 3 3 0 1 0 1 0 1 2 0 2 0 0 0 1 0 0 15 0 1893.8679 P78527 P78527 1769 1783 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0028432 106.55 By MS/MS 1.5 0.5 1 1 2 260490 260490 0 3785 1225 3920 8787;8788 7241;7242 7242 721 2 78732 0 EQQIVIQSSGGLSK NGIVHVSAKDKGTGREQQIVIQSSGGLSKD REQQIVIQSSGGLSKDDIENMVKNAEKYAE R E Q S K D 0 0 0 0 0 3 1 2 0 2 1 1 0 0 0 3 0 0 0 1 0 0 14 0 1472.7835 P38646 P38646 542 555 HSPA9 Stress-70 protein, mitochondrial yes yes 2 7.5535E-34 314.35 By MS/MS 5 0 1 1 3319800 3319800 0 3786 850 3921 8789 7243 7243 1 33296 0 EQQLAEIEAR ALVLGPLKSVQELRREQQLAEIEARRQERE QELRREQQLAEIEARRQEREKNGNEEGEER R E Q A R R 2 1 0 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1185.599 Q15155;P69849;Q5JPE7 Q15155 708 717 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 0.0013411 117.02 By MS/MS 2 0.816 1 1 1 3 1848600 1848600 0 3787 1216 3922 8790;8791;8792 7244;7245 7245 2 256920 0 EQQLPVNEETLFQK FEAEEKLAEWVLTQREQQLPVNEETLFQKA REQQLPVNEETLFQKATKIGRSLEGGFKIS R E Q Q K A 0 0 1 0 0 3 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 14 0 1701.8574 Q7Z3K3 Q7Z3K3 1040 1053 POGZ Pogo transposable element with ZNF domain yes yes 2 0.0083805 90.731 By MS/MS 3 0.816 1 1 1 3 576440 576440 0 3788 1785 3923 8793;8794;8795 7246 7246 1 76964 0 EQQQREQAKQEYQAQK NLQQWHLDLVQLIQREQQQREQAKQEYQAQ QQQREQAKQEYQAQKAAKASA_________ R E Q Q K A 2 1 0 0 0 7 3 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 16 2 2018.977 Q92552 Q92552 393 408 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 3 1.6369E-05 200.19 By MS/MS 7 0 1 1 1262300 1262300 0 3789 2054 3924 8796 7247 7247 1 19816 0 EQQVDGDLLLR WLQQIGFSKYCESFREQQVDGDLLLRLTEE ESFREQQVDGDLLLRLTEEELQTDLGMKSG R E Q L R L 0 1 0 2 0 2 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1284.6674 Q6SZW1 Q6SZW1 435 445 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.0075367 110.14 By MS/MS 5 0 1 1 611280 611280 0 3790 1726 3925 8797 7248 7248 1 6130.8 0 EQSELVDLAENIQQK NKTGTLHEACEQLLKEQSELVDLAENIQQK EQSELVDLAENIQQKLSYFNELETINTKLN K E Q Q K L 1 0 1 1 0 3 3 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 15 0 1742.8687 Q96JB2 Q96JB2 182 196 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 1.3595E-16 258.65 By MS/MS 4 0 1 1 264730 264730 0 3791 2176 3926 8798 7249 7249 1 24913 0 EQSGPSPLEETR FFLVLVMEQITLAYKEQSGPSPLEETRALL AYKEQSGPSPLEETRALLGTVNGGPQHWHD K E Q T R A 0 1 0 0 0 1 3 1 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 0 1328.6208 Q9NY26 Q9NY26 135 146 SLC39A1 Zinc transporter ZIP1 yes yes 2 0.00066404 131.42 By MS/MS 8 0 1 1 955230 955230 0 3792 2631 3927 8799 7250 7250 1 12060 0 EQSILELGSLLAK KRDIQENDEEAVQVKEQSILELGSLLAKTG VKEQSILELGSLLAKTGQAAELGGLLKYVR K E Q A K T 1 0 0 0 0 1 2 1 0 1 4 1 0 0 0 2 0 0 0 0 0 0 13 0 1399.7922 O00231 O00231 47 59 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 1.5324E-07 206.36 By MS/MS 7 0.816 1 1 1 3 2036200 2036200 0 3793 93 3928 8800;8801;8802 7251;7252;7253 7251 3 24561 0 EQSNDIAR NFSNSADDIKSKKKREQSNDIARGFERGLE IKSKKKREQSNDIARGFERGLEPEKIIGAT R E Q A R G 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 8 0 931.43592 P45973 P45973 108 115 CBX5 Chromobox protein homolog 5 yes yes 2 0.042451 96.19 By MS/MS 9 0 1 1 0 0 0 3794 905 3929 8803 7254 7254 1 0 0 EQSQLTATQTR SQQRQQIAEIEKQTKEQSQLTATQTRTVNK KQTKEQSQLTATQTRTVNKHGDEIITSTTS K E Q T R T 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 11 0 1261.6262 Q6P2Q9 Q6P2Q9 2035 2045 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 8.7057E-07 192.44 By MS/MS By matching 3.29 1.67 1 2 1 1 1 1 6 1 6484700 6434200 50526 3795 1708 3930 8804;8805;8806;8807;8808;8809;8810 7255;7256;7257 7255 3 1479000 71454 EQSSSSFSQGQSS SSSSSSSRQTRPILKEQSSSSFSQGQSS__ LKEQSSSSFSQGQSS_______________ K E Q S S - 0 0 0 0 0 3 1 1 0 0 0 0 0 1 0 7 0 0 0 0 0 0 13 0 1344.543 CON__P08779;P08779 CON__P08779 461 473 KRT16 Keratin, type I cytoskeletal 16 yes no 2 9.6333E-39 290.28 By MS/MS 10 0 1 1 451650 0 451650 + 3796 47 3931 8811 7258 7258 1 0 578240 EQTAQAIANTAR HGVRCLSSEHAVIVKEQTAQAIANTARAYE IVKEQTAQAIANTARAYEKSGVEAALSEVM K E Q A R A 4 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 12 0 1272.6422 Q96RU2 Q96RU2 744 755 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 2 0.035626 90.913 By MS/MS 3 0 1 1 0 0 0 3797 2228 3932 8812 7259 7259 1 0 0 EQTGLEAYALGLDTK GRQTWTYLQDERAGREQTGLEAYALGLDTK EQTGLEAYALGLDTKNYFKDLPKAHTAFEG R E Q T K N 2 0 0 1 0 1 2 2 0 0 3 1 0 0 0 0 2 0 1 0 0 0 15 0 1607.8043 P48449 P48449 47 61 LSS Lanosterol synthase yes yes 2 8.4974E-05 185.2 By MS/MS 5 0 1 1 908500 908500 0 3798 935 3933 8813 7260 7260 1 9111.8 0 EQTVYYAK EIENMGAHLNAYTSREQTVYYAKAFSKDLP LNAYTSREQTVYYAKAFSKDLPRAVEILAD R E Q A K A 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 2 1 0 0 8 0 1000.4866 O75439 O75439 137 144 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.043599 84.916 By MS/MS 6.5 0.5 1 1 2 1171600 1171600 0 3799 329 3934 8814;8815 7261 7261 1 16798 0 EQVANSAFVER KETQKSIYYITGESKEQVANSAFVERVRKR GESKEQVANSAFVERVRKRGFEVVYMTEPI K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 4.5049E-09 206.73 By MS/MS By MS/MS 3.71 1.83 1 1 1 2 1 1 6 1 70525000 70120000 404950 3800 521 3935 8816;8817;8818;8819;8820;8821;8822 7262;7263;7264;7265;7266;7267 7266 5 6201600 862810 EQVPGFTPR AQIRARLKNQVTQLKEQVPGFTPRLAILQV QVTQLKEQVPGFTPRLAILQVGNRDDSNLY K E Q P R L 0 1 0 0 0 1 1 1 0 0 0 0 0 1 2 0 1 0 0 1 0 0 9 0 1029.5243 P11586 P11586 29 37 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.021746 88.177 By MS/MS 4 0 1 1 4541800 4541800 0 3801 582 3936 8823 7268 7268 1 427410 0 EQVSPLETTLEK STEVQSLYREIKDAKEQVSPLETTLEKFQQ DAKEQVSPLETTLEKFQQEKEELINKKNTS K E Q E K F 0 0 0 0 0 1 3 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 12 0 1372.7086 Q92878 Q92878 910 921 RAD50 DNA repair protein RAD50 yes yes 2 0.025181 82.494 By MS/MS 3 0 1 1 429920 429920 0 3802 2074 3937 8824 7269 7269 1 7866.4 0 EQYGQYALAVR RNTGEIRTMNNFLDREQYGQYALAVRGSDR FLDREQYGQYALAVRGSDRDGGADGMSAEC R E Q V R G 2 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 2 1 0 0 11 0 1296.6463 Q02413 Q02413 228 238 DSG1 Desmoglein-1 yes yes 2 2.2218E-07 190.02 By MS/MS 3 0 1 1 0 0 0 3803 1277 3938 8825 7270 7270 1 0 0 EQYLELVSAALR LLSHHRRALRLQVSREQYLELVSAALRRPG VSREQYLELVSAALRRPGPSLVLYMVDLLD R E Q L R R 2 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 1 1 0 0 12 0 1390.7456 Q8NC60 Q8NC60 199 210 NOA1 Nitric oxide-associated protein 1 yes yes 2 0.00012058 169.82 By MS/MS 5 0 1 1 208850 208850 0 3804 1949 3939 8826 7271 7271 1 2094.7 0 ERDVIMR RDFTVSAMHGDMDQKERDVIMREFRSGSSR MHGDMDQKERDVIMREFRSGSSRVLITTDL K E R M R E 0 2 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 7 1 917.47529 P60842;Q14240 P60842 310 316 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2;3 0.022705 157.21 By MS/MS 6 0 2 2 41338000 41338000 0 3805 1097 3940 8827;8828 7272;7273 7272 2 284170 0 ERELDEELAQR E R Q R 1 2 0 1 0 1 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 11 1 1386.6739 REV__Q96SN8 yes yes 2 0.0064007 107.69 By MS/MS 6 0 1 1 11461000 11461000 0 + 3806 2981 3941 8829 7274 7274 1 78782 0 ERELQHAALGGTATR KQEELNRKAEELDRRERELQHAALGGTATR ERELQHAALGGTATRQNNWPPLPSFCPVQP R E R T R Q 3 2 0 0 0 1 2 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 15 1 1608.8332 O14828 O14828 117 131 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 3 0.0091164 87.566 By MS/MS 7.5 0.5 1 1 2 2683700 2683700 0 3807 141 3942 8830;8831 7275;7276 7276 2 37849 0 ERFAGVDIR TLQYKLLEPVLLLGKERFAGVDIRVRVKGG VLLLGKERFAGVDIRVRVKGGGHVAQIYAI K E R I R V 1 2 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 1 1061.5618 P62249 P62249 61 69 RPS16 40S ribosomal protein S16 yes yes 3 0.0057458 102.06 By MS/MS 10 0 1 1 1031700 1031700 0 3808 1145 3943 8832 7277 7277 1 55606 0 ERGVTMDVGMTK SFAYAWVLDETGEERERGVTMDVGMTKFET EERERGVTMDVGMTKFETTTKVITLMDAPG R E R T K F 0 1 0 1 0 0 1 2 0 0 0 1 2 0 0 0 2 0 0 2 0 0 12 1 1322.6323 Q9Y450 Q9Y450 321 332 HBS1L HBS1-like protein yes yes 2 0.050295 58.433 By MS/MS 5 0 1 1 77038 0 77038 3809 2887 3944 8833 7278 7278 1194;1195 1 0 64695 ERHPGSFDVVHVK TGGANLGRIGVITNRERHPGSFDVVHVKDA NRERHPGSFDVVHVKDANGNSFATRLSNIF R E R V K D 0 1 0 1 0 0 1 1 2 0 0 1 0 1 1 1 0 0 0 3 0 0 13 1 1505.7739 P62701;P22090 P62701 199 211 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 3;4 0.0089712 109.6 By MS/MS 8.75 0.829 2 1 1 4 30965000 30965000 0 3810 1165 3945 8834;8835;8836;8837 7279;7280 7280 2 421940 0 ERILQEHEQIK AEEERLRQEAKEREKERILQEHEQIKKKTV EREKERILQEHEQIKKKTVRERLEQIKKTE K E R I K K 0 1 0 0 0 2 3 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1421.7627 Q14152 Q14152 622 632 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.00047024 126.71 By MS/MS 3 0 1 1 634990 634990 0 3811 1422 3946 8838 7281 7281 1 11619 0 ERLELCDER VREQCEQLEKCVKARERLELCDERVSSRSH KCVKARERLELCDERVSSRSHTEEDCTEEL R E R E R V 0 2 0 1 1 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 1 1218.5663 P07919 P07919 48 56 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial yes yes 2 0.0092396 122.96 By MS/MS 10 0 1 1 847970 847970 0 3812 515 3947 8839 7282 7282 1 45703 0 ERLEQIKK RILQEHEQIKKKTVRERLEQIKKTELGAKA IKKKTVRERLEQIKKTELGAKAFKDIDIED R E R K K T 0 1 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 8 2 1042.6135 Q14152 Q14152 638 645 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00015554 171.53 By MS/MS 3.75 0.829 2 1 1 4 13433000 13433000 0 3813 1422 3948 8840;8841;8842;8843 7283;7284 7283 2 271860 0 ERLESLNIQR HQRILARRQTIEERKERLESLNIQREKEEL IEERKERLESLNIQREKEELEQREAELQKV K E R Q R E 0 2 1 0 0 1 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 1 1256.6837 Q14152 Q14152 580 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0027088 117.02 By MS/MS 3 0 2 2 3304100 3304100 0 3814 1422 3949 8844;8845 7285;7286 7286 2 60456 0 ERLSMYLMK YKAEPLETFPFDQSKERLSMYLMKADLMPF PFDQSKERLSMYLMKADLMPFLYWNMMLRG K E R M K A 0 1 0 0 0 0 1 0 0 0 2 1 2 0 0 1 0 0 1 0 0 0 9 1 1169.5937 Q9Y6N5 Q9Y6N5 410 418 SQRDL Sulfide:quinone oxidoreductase, mitochondrial yes yes 2 0.030557 86.833 By MS/MS 3 0 1 1 81363 0 81363 3815 2950 3950 8846 7287 7287 1217;1218 0 0 10356 ERPDCLDTVLAR YLDMNRFDLAKEYCRERPDCLDTVLAREAD YCRERPDCLDTVLAREADFCFRQRRYLESA R E R A R E 1 2 0 2 1 0 1 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 12 1 1443.714 Q9P253 Q9P253 417 428 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 0.00099035 150.46 By MS/MS 4 0 1 1 748860 748860 0 3816 2677 3951 8847 7288 7288 1 70473 0 ERPPDHQHSAQVK IKMKIALRVLHLEKRERPPDHQHSAQVKRP KRERPPDHQHSAQVKRPSVSKEGRKTSIKS R E R V K R 1 1 0 1 0 2 1 0 2 0 0 1 0 0 2 1 0 0 0 1 0 0 13 1 1527.7542 A0FGR8 A0FGR8 661 673 ESYT2 Extended synaptotagmin-2 yes yes 3 0.00062505 126.34 By MS/MS 4.5 0.5 1 1 2 282640 282640 0 3817 6 3952 8848;8849 7289;7290 7290 2 22758 0 ERPPEEVAAR PTPALSEEASSSSIRERPPEEVAARLAQQE SSSIRERPPEEVAARLAQQEKQEQVKIESL R E R A R L 2 2 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 10 1 1152.5887 Q16891 Q16891 196 205 IMMT MICOS complex subunit MIC60 yes yes 2 0.0044058 125.71 By MS/MS 4 0 1 1 2078600 2078600 0 3818 1563 3953 8850 7291 7291 1 195610 0 ERPSQPEGLR ATKRSFSKEVEERSRERPSQPEGLRKAASL EERSRERPSQPEGLRKAASLTEDRDRGRDA R E R L R K 0 2 0 0 0 1 2 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 10 1 1167.5996 Q04637 Q04637 1196 1205 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0070841 115.23 By MS/MS 2.4 1.02 1 2 1 1 5 6580200 6580200 0 3819 1291 3954 8851;8852;8853;8854;8855 7292;7293 7292 2 1964900 0 ERPSQPEGLRK ATKRSFSKEVEERSRERPSQPEGLRKAASL ERSRERPSQPEGLRKAASLTEDRDRGRDAV R E R R K A 0 2 0 0 0 1 2 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 2 1295.6946 Q04637 Q04637 1196 1206 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00015675 144.55 By MS/MS By matching 3.29 1.67 2 4 2 2 2 2 13 1 26280000 26236000 44386 3820 1291 3955 8856;8857;8858;8859;8860;8861;8862;8863;8864;8865;8866;8867;8868;8869 7294;7295;7296;7297;7298;7299;7300;7301;7302 7300 9 6584900 62771 ERQILFQHR AEACDIMVKRGDKKRERQILFQHRQALAEQ RGDKKRERQILFQHRQALAEQLKVTEDPAL R E R H R Q 0 2 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 9 1 1225.668 O94874 O94874 661 669 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.0052046 93.111 By MS/MS 4 0 1 1 686200 686200 0 3821 372 3956 8870 7303;7304 7304 2 64576 0 ERQTVALKR AAAAAATAAAAASIRERQTVALKRMLNFNV AAASIRERQTVALKRMLNFNVPHIKNSTGE R E R K R M 1 2 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 2 1099.6462 Q8WVM8 Q8WVM8 17 25 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.0081389 86.882 By MS/MS 5 0 1 1 772740 772740 0 3822 2028 3957 8871 7305 7305 1 7750.1 0 ERVEDVPIPIYFPPESQR PHGAKFKINPKNGQRERVEDVPIPIYFPPE EDVPIPIYFPPESQRGLWGGEGWILGQIYA R E R Q R G 0 2 0 1 0 1 3 0 0 2 0 0 0 1 4 1 0 0 1 2 0 0 18 1 2170.1059 Q13084 Q13084 60 77 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 3 0.00039417 116 By MS/MS 8 0 1 1 376110 376110 0 3823 1350 3958 8872 7306 7306 1 4748.3 0 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR AATVASATGDSASERESAAPAAAPTAEAPP VTRPEPQALPSPAIRAPLPDLYPFGTMRGG R E S I R A 9 2 0 0 0 1 3 0 0 1 1 0 0 0 9 3 2 0 0 2 0 0 33 1 3245.7044 Q92841 Q92841 36 68 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 3 2.5673E-05 69.578 By MS/MS 5 0 1 1 2960000 2960000 0 3824 2073 3959 8873 7307 7307 1 29687 0 ESAINVAEGK ERRKRATVLESEGTRESAINVAEGKKQAQI SEGTRESAINVAEGKKQAQILASEAEKAEQ R E S G K K 2 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 0 1016.5138 Q9UJZ1 Q9UJZ1 212 221 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.043418 75.509 By MS/MS By matching 7 0 2 1 1 2203000 2144800 58203 3825 2755 3960 8874;8875 7308 7308 1 33670 104820 ESATADAGYAILEK NSFQPISSLRDDERRESATADAGYAILEKK RESATADAGYAILEKKGALAERQHTSMDLP R E S E K K 4 0 0 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 14 0 1437.6987 P98175 P98175 686 699 RBM10 RNA-binding protein 10 yes yes 2 0.00018315 171.49 By matching By MS/MS 4 0 2 1 1 385470 317420 68054 3826 1252 3961 8876;8877 7309;7310 7310 2 29871 145000 ESCDSALR DPQPEEADGGLKSWRESCDSALRAYVKDHY GGLKSWRESCDSALRAYVKDHYSNGFCTVY R E S L R A 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 8 0 936.39709 P52907 P52907 122 129 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 2 0.03867 86.794 By MS/MS 7 0 1 1 1700500 1700500 0 3827 1025 3962 8878 7311 7311 1 26694 0 ESCLEAYTGIVQGLK DKSDYDMVDYLNELRESCLEAYTGIVQGLK ESCLEAYTGIVQGLKGDQENVHPDVMLVQP R E S L K G 1 0 0 0 1 1 2 2 0 1 2 1 0 0 0 1 1 0 1 1 0 0 15 0 1666.8236 Q14974 Q14974 763 777 KPNB1 Importin subunit beta-1 yes yes 2 6.6983E-44 331.8 By MS/MS 4 0 1 1 743650 743650 0 3828 1462 3963 8879 7312 7312 1 69982 0 ESDLPSAILQTSGVSEFTK GRDRKKDKQHLKRKKESDLPSAILQTSGVS PSAILQTSGVSEFTKKRSKLVLPAPQISDA K E S T K K 1 0 0 1 0 1 2 1 0 1 2 1 0 1 1 4 2 0 0 1 0 0 19 0 2008.0001 Q99459 Q99459 272 290 CDC5L Cell division cycle 5-like protein yes yes 2 6.4297E-18 267.5 By MS/MS 4 0 1 1 375980 375980 0 3829 2245 3964 8880 7313 7313 1 35383 0 ESDTGLAPPALWDLAADK IQQLLKKINELTGIKESDTGLAPPALWDLA TGLAPPALWDLAADKQTLQSEQPLQVARCT K E S D K Q 4 0 0 3 0 0 1 1 0 0 3 1 0 0 2 1 1 1 0 0 0 0 18 0 1868.9156 P35998 P35998 67 84 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.033239 68.033 By MS/MS 6 0 1 1 198530 198530 0 3830 831 3965 8881 7314 7314 1 1364.7 0 ESDVGFIPTSGLSGENLITR ITGKLGHFLKQAGFKESDVGFIPTSGLSGE FIPTSGLSGENLITRSQSSELTKWYKGLCL K E S T R S 0 1 1 1 0 0 2 3 0 2 2 0 0 1 1 3 2 0 0 1 0 0 20 0 2091.0484 Q9Y450 Q9Y450 436 455 HBS1L HBS1-like protein yes yes 2 8.9188E-06 179.56 By MS/MS 4.5 0.5 1 1 2 444210 444210 0 3831 2887 3966 8882;8883 7315 7315 1 11840 0 ESDYFTPQGEFR WMVRIAEGEHPKDIRESDYFTPQGEFRVDK DIRESDYFTPQGEFRVDKAGSPTLLNCLMY R E S F R V 0 1 0 1 0 1 2 1 0 0 0 0 0 2 1 1 1 0 1 0 0 0 12 0 1474.6365 Q8TCJ2 Q8TCJ2 692 703 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 4.4392E-05 169.21 By MS/MS 3 1.41 1 1 1 1 1 5 2027400 2027400 0 3832 1991 3967 8884;8885;8886;8887;8888 7316;7317;7318 7317 3 357400 0 ESEDFIVEQYK RYLLFARQFKPKISKESEDFIVEQYKHLRQ KISKESEDFIVEQYKHLRQRDGSGVTKSSW K E S Y K H 0 0 0 1 0 1 3 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1385.6351 Q14566 Q14566 589 599 MCM6 DNA replication licensing factor MCM6 yes yes 2 2.8858E-13 237.51 By MS/MS 4 0 1 1 2381800 2381800 0 3833 1444 3968 8889 7319 7319 1 224140 0 ESEGFEEHVPSDNS RYKEGRVILERALVRESEGFEEHVPSDNS_ RESEGFEEHVPSDNS_______________ R E S N S - 0 0 1 1 0 0 4 1 1 0 0 0 0 1 1 3 0 0 0 1 0 0 14 0 1561.6169 P62699 P62699 108 121 YPEL5 Protein yippee-like 5 yes yes 2 2.2416E-05 196.44 By MS/MS 10 0 1 1 495980 495980 0 3834 1164 3969 8890 7320 7320 1 26731 0 ESEITDEDIDGILER LQMIRHGATHVFASKESEITDEDIDGILER ESEITDEDIDGILERGAKKTAEMNEKLSKM K E S E R G 0 1 0 3 0 0 4 1 0 3 1 0 0 0 0 1 1 0 0 0 0 0 15 0 1732.8003 O60264 O60264 666 680 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 2.2993E-05 198.55 By MS/MS 4 0.816 1 1 1 3 638630 638630 0 3835 251 3970 8891;8892;8893 7321;7322 7322 2 36185 0 ESELLLFTER LINDLQKDIEGSRKRESELLLFTERLTSKN GSRKRESELLLFTERLTSKNAQLQSESNSL R E S E R L 0 1 0 0 0 0 3 0 0 0 3 0 0 1 0 1 1 0 0 0 0 0 10 0 1235.6398 Q7Z3E2 Q7Z3E2 585 594 CCDC186 Coiled-coil domain-containing protein 186 yes yes 2 0.0085922 104.05 By MS/MS 4 0 1 1 0 0 0 3836 1783 3971 8894 7323 7323 1 0 0 ESGSLSPEHGPVVVHCSAGIGR PESPASFLNFLFKVRESGSLSPEHGPVVVH EHGPVVVHCSAGIGRSGTFCLADTCLLLMD R E S G R S 1 1 0 0 1 0 2 4 2 1 1 0 0 0 2 4 0 0 0 3 0 0 22 0 2231.0753 P18031 P18031 200 221 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 3 0.00053625 93.5 By MS/MS 6 0 1 1 5429700 5429700 0 3837 649 3972 8895 7324;7325 7325 2 37325 0 ESHRLPVDIAYKR LLEAQIATGGIIDPKESHRLPVDIAYKRGY PKESHRLPVDIAYKRGYFNEELSEILSDPS K E S K R G 1 2 0 1 0 0 1 0 1 1 1 1 0 0 1 1 0 0 1 1 0 0 13 2 1582.858 P15924 P15924 2382 2394 DSP Desmoplakin yes yes 3 8.6385E-06 179.59 By MS/MS 3 0 1 1 624110 0 624110 3838 628 3973 8896 7326 7326 1 0 79440 ESINFSILNK VVGRLKTGTPPRIAKESINFSILNKHIPDN PRIAKESINFSILNKHIPDNPSIPFSFTNE K E S N K H 0 0 2 0 0 0 1 0 0 2 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1163.6186 Q9Y2Z2 Q9Y2Z2 246 255 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.00033344 138.06 By MS/MS 5 0 1 1 813530 813530 0 3839 2851 3974 8897 7327 7327 1 8159.3 0 ESISDVGFGMLK SHHHGVGKLRKQWLKESISDVGFGMLKSVK WLKESISDVGFGMLKSVKEYVDPNNIFGNR K E S L K S 0 0 0 1 0 0 1 2 0 1 1 1 1 1 0 2 0 0 0 1 0 0 12 0 1281.6275 O00116 O00116 629 640 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.00094073 125.68 By MS/MS 5 0 2 2 1207300 1207300 0 3840 80 3975;3976 8898;8899 7328;7329 7328 55 2 12109 0 ESIVDVEGVVR HASKQMVKFAANINKESIVDVEGVVRKVNQ NINKESIVDVEGVVRKVNQKIGSCTQQDVE K E S V R K 0 1 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 0 4 0 0 11 0 1200.635 P14868 P14868 111 121 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 8.8485E-07 192.26 By MS/MS By MS/MS 4.4 2.42 1 1 2 1 4 1 9452700 9379400 73252 3841 620 3977 8900;8901;8902;8903;8904 7330;7331;7332 7332 3 184880 75063 ESKEEETSIDVAGKPNEVTK YRLLAKEQKANEQKKESKEEETSIDVAGKP ETSIDVAGKPNEVTKAAESPDQKDTDGGPK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3;4 7.9036E-14 247.44 By MS/MS 3.8 2.23 2 2 1 1 1 1 2 10 8788500 8788500 0 3842 1038 3978 8905;8906;8907;8908;8909;8910;8911;8912;8913;8914 7333;7334;7335;7336;7337;7338;7339;7340;7341;7342 7340 10 1016900 0 ESLAQTSSTITESLMGISR LLQGGDLLRQRKTTKESLAQTSSTITESLM QTSSTITESLMGISRMMAQQVQQSEEAMQS K E S S R M 1 1 0 0 0 1 2 1 0 2 2 0 1 0 0 5 3 0 0 0 0 0 19 0 2009.9939 Q12981 Q12981 129 147 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.00027052 117.08 By MS/MS 8 0 1 1 95649 95649 0 3843 1343 3979 8915 7343 7343 786 1 1207.6 0 ESLDDLTNLVVK AYYSSNLMAVCVLGRESLDDLTNLVVKLFS LGRESLDDLTNLVVKLFSEVENKNVPLPEF R E S V K L 0 0 1 2 0 0 1 0 0 0 3 1 0 0 0 1 1 0 0 2 0 0 12 0 1344.7137 P14735 P14735 262 273 IDE Insulin-degrading enzyme yes yes 2 4.6154E-06 188.91 By MS/MS 4 0 1 1 648580 648580 0 3844 618 3980 8916 7344 7344 1 61036 0 ESLEALLQR VWLRAAYFEKNHGTRESLEALLQRAVAHCP KNHGTRESLEALLQRAVAHCPKAEVLWLMG R E S Q R A 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1057.5768 O94906 O94906 591 599 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.00078662 137.9 By MS/MS 4.5 0.5 1 1 2 3125100 3125100 0 3845 376 3981 8917;8918 7345;7346 7345 2 263670 0 ESLHEVSK EVLRKKLGELTGTVKESLHEVSKSDLGRKI ELTGTVKESLHEVSKSDLGRKIKEGVEEAA K E S S K S 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 8 0 927.46616 O43615 O43615 131 138 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.023448 84.916 By MS/MS 7 0 1 1 2376400 2376400 0 3846 221 3982 8919 7347 7347 1 37305 0 ESLHEVSKSDLGR EVLRKKLGELTGTVKESLHEVSKSDLGRKI VKESLHEVSKSDLGRKIKEGVEEAAKTAKQ K E S G R K 0 1 0 1 0 0 2 1 1 0 2 1 0 0 0 3 0 0 0 1 0 0 13 1 1455.7318 O43615 O43615 131 143 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.033306 67.749 By MS/MS 7.5 0.5 1 1 2 2219900 2219900 0 3847 221 3983 8920;8921 7348 7348 1 34259 0 ESLKELSLAGNELGDEGAR TAKGCGDLCRVLRAKESLKELSLAGNELGD ELSLAGNELGDEGARLLCETLLEPGCQLES K E S A R L 2 1 1 1 0 0 4 3 0 0 4 1 0 0 0 2 0 0 0 0 0 0 19 1 1986.9858 P13489 P13489 284 302 RNH1 Ribonuclease inhibitor yes yes 2;3 7.4098E-07 252.01 By MS/MS 7 0 2 2 4567200 4567200 0 3848 601 3984 8922;8923 7349;7350 7350 2 71697 0 ESLLLQVR RICVQNSTFSATWNRESLLLQVRGSGGARL FSATWNRESLLLQVRGSGGARLSTKDPLPT R E S V R G 0 1 0 0 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 8 0 956.56548 Q9BZE1 Q9BZE1 216 223 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 0.00028672 166.05 By MS/MS By matching 7.33 0.471 2 1 2 1 5996600 5961400 35151 3849 2376 3985 8924;8925;8926 7351 7351 1 91812 63306 ESLSTAAECVK GMFVDAFSKQVFDSKESLSTAAECVKVAKE FDSKESLSTAAECVKVAKEHCQQLGDIGLD K E S V K V 2 0 0 0 1 0 2 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1193.5598 Q8IYI6 Q8IYI6 513 523 EXOC8 Exocyst complex component 8 yes yes 2 0.0010957 119.68 By MS/MS 5 0 1 1 905040 905040 0 3850 1887 3986 8927 7352 7352 1 9077.1 0 ESLVVNYEDLAAR NVFKERISDMCKENRESLVVNYEDLAAREH NRESLVVNYEDLAAREHVLAYFLPEAPAEL R E S A R E 2 1 1 1 0 0 2 0 0 0 2 0 0 0 0 1 0 0 1 2 0 0 13 0 1477.7413 P49736 P49736 228 240 MCM2 DNA replication licensing factor MCM2 yes yes 2 5.8026E-33 294.01 By MS/MS 3.5 0.5 1 1 2 1628100 1628100 0 3851 958 3987 8928;8929 7353;7354 7353 2 109310 0 ESMIQLF ELQIPVKWIGVGKSRESMIQLF________ WIGVGKSRESMIQLF_______________ R E S L F - 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 7 0 866.42079 P30520;Q8N142 P30520 450 456 ADSS;ADSSL1 Adenylosuccinate synthetase isozyme 2;Adenylosuccinate synthetase isozyme 1 yes no 1 0.0099908 96.048 By MS/MS 7 0 1 1 79943 79943 0 3852 774 3988 8930 7355;7356 7356 383 2 1255 0 ESNVQEVR QVKSLCEKAKEILTKESNVQEVRCPVTVCG AKEILTKESNVQEVRCPVTVCGDVHGQFHD K E S V R C 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 8 0 959.46722 P67775;P62714 P67775 42 49 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 0.0064572 118.74 By MS/MS 8 0.816 1 1 1 3 1992300 1992300 0 3853 1166 3989 8931;8932;8933 7357 7357 1 31149 0 ESNYFGLSPEER KPDRERVEDFDHTSRESNYFGLSPEERREK TSRESNYFGLSPEERREKQAIEESRLLYEI R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.00024387 147.62 By MS/MS By MS/MS 3 0 2 1 1 288640 168580 120060 3854 1270 3990 8934;8935 7358;7359;7360 7360 3 3084.6 15281 ESPESEGPIYEGLIL NKHFHNTLEHLRLRRESPESEGPIYEGLIL ESPESEGPIYEGLIL_______________ R E S I L - 0 0 0 0 0 0 4 2 0 2 2 0 0 0 2 2 0 0 1 0 0 0 15 0 1631.793 Q96QK1 Q96QK1 782 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00036735 148.32 By MS/MS 6 1.41 1 1 1 1 1 5 1688500 1688500 0 3855 2217 3991 8936;8937;8938;8939;8940 7361;7362;7363;7364;7365;7366 7366 6 22199 0 ESPNPPNPSGQCPICR GKTTIIEGRITATPKESPNPPNPSGQCPIC SPNPPNPSGQCPICRWNLKHKYNYDDVLLL K E S C R W 0 1 2 0 2 1 1 1 0 1 0 0 0 0 5 2 0 0 0 0 0 0 16 0 1808.7934 Q9NVS2 Q9NVS2 59 74 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 7.448E-05 190.66 By MS/MS 9.5 0.5 1 1 2 3361400 3361400 0 3856 2602 3992 8941;8942 7367;7368;7369 7368 3 81124 0 ESQAKDVIEEYFK KVVGCSCVVVKDYGKESQAKDVIEEYFKCK GKESQAKDVIEEYFKCKK____________ K E S F K C 1 0 0 1 0 1 3 0 0 1 0 2 0 1 0 1 0 0 1 1 0 0 13 1 1584.7672 P25398 P25398 117 129 RPS12 40S ribosomal protein S12 yes yes 2;3 0.0023233 122.18 By MS/MS 10 0 2 2 3961900 3961900 0 3857 721 3993 8943;8944 7370;7371 7371 2 213530 0 ESQDTSFTTLVER TETIAKLVKYMYDNRESQDTSFTTLVERVI NRESQDTSFTTLVERVIQQLEGAFALVFKS R E S E R V 0 1 0 1 0 1 2 0 0 0 1 0 0 1 0 2 3 0 0 1 0 0 13 0 1511.7104 Q06210 Q06210 164 176 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 5.7161E-06 199.4 By MS/MS 5 0 1 1 4688000 4688000 0 3858 1295 3994 8945 7372 7372 1 47018 0 ESQLLLNVVSQLAK VIDGLNVAKMFPKVRESQLLLNVVSQLAKR RESQLLLNVVSQLAKRNLRLLVLGRKHMLR R E S A K R 1 0 1 0 0 2 1 0 0 0 4 1 0 0 0 2 0 0 0 2 0 0 14 0 1540.8825 O15091 O15091 422 435 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 8.8705E-25 291.5 By MS/MS 6 0 1 1 107120 107120 0 3859 159 3995 8946 7373 7373 1 736.36 0 ESQNSLDESLPFR DDIISDPDSHFPAWRESQNSLDESLPFRGS WRESQNSLDESLPFRGSGTAIKPLPSYENL R E S F R G 0 1 1 1 0 1 2 0 0 0 2 0 0 1 1 3 0 0 0 0 0 0 13 0 1520.7107 Q8IXW5 Q8IXW5 425 437 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 0.0010157 136.81 By MS/MS 5 0 1 1 1363300 1363300 0 3860 1879 3996 8947 7374 7374 1 13673 0 ESQQQHGLR EFGDSLSLEILQIIKESQQQHGLRHGDFQR ILQIIKESQQQHGLRHGDFQRYRGYCSRRQ K E S L R H 0 1 0 0 0 3 1 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1081.5265 Q9UHB9 Q9UHB9 68 76 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00034583 151.44 By MS/MS 5.5 0.5 1 1 2 1465300 1465300 0 3861 2728 3997 8948;8949 7375 7375 1 14366 0 ESQSPDTTIQR KPDEQGLQQILQLLKESQSPDTTIQRTVQQ QLLKESQSPDTTIQRTVQQKLEQLNQYPDF K E S Q R T 0 1 0 1 0 2 1 0 0 1 0 0 0 0 1 2 2 0 0 0 0 0 11 0 1260.5946 Q92973 Q92973 29 39 TNPO1 Transportin-1 yes yes 2 0.00018125 144.77 By MS/MS 6 1.41 1 1 1 1 1 5 4922100 4922100 0 3862 2082 3998 8950;8951;8952;8953;8954 7376 7376 1 370880 0 ESQVSILQSLFGER ______________________________ RESQVSILQSLFGERHHFSFPSIFIYGHTA R E S E R H 0 1 0 0 0 2 2 1 0 1 2 0 0 1 0 3 0 0 0 1 0 0 14 0 1591.8206 O43913 O43913 12 25 ORC5 Origin recognition complex subunit 5 yes yes 2 0.00047573 153.75 By MS/MS 6 0 1 1 31840 31840 0 3863 245 3999 8955 7377 7377 1 218.88 0 ESSCLALNDLLR QDLVKNLTSNMWRVRESSCLALNDLLRGRP RVRESSCLALNDLLRGRPLDDIIDKLPEIW R E S L R G 1 1 1 1 1 0 1 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 12 0 1389.6922 Q5VYK3 Q5VYK3 1180 1191 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 2.9299E-09 225.22 By MS/MS 3.5 1.12 1 1 1 1 4 1390200 1390200 0 3864 1656 4000 8956;8957;8958;8959 7378;7379 7378 2 328690 0 ESSEAQVQK EHNQLEAHPKADFIRESSEAQVQKFLSRSV KADFIRESSEAQVQKFLSRSVEDVRPHHTD R E S Q K F 1 0 0 0 0 2 2 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 9 0 1004.4775 Q9Y520 Q9Y520 865 873 PRRC2C Protein PRRC2C yes yes 2 0.00010805 160.63 By MS/MS 2 0 1 1 431740 431740 0 3865 2905 4001 8960 7380 7380 1 146030 0 ESSEEPLAPSDPFSLK ESFSILCIAHPLEKRESSEEPLAPSDPFSL SSEEPLAPSDPFSLKTIEDVREFLGRHSER R E S L K T 1 0 0 1 0 0 3 0 0 0 2 1 0 1 3 4 0 0 0 0 0 0 16 0 1731.8203 Q96NW4 Q96NW4 121 136 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.0083747 91.202 By MS/MS 4 0 1 1 408510 408510 0 3866 2205 4002 8961 7381 7381 1 38444 0 ESSGLVLLSSCPQTASR GLREQELQVVRASGKESSGLVLLSSCPQTA SGLVLLSSCPQTASRLQKYFTHARRAQRPT K E S S R L 1 1 0 0 1 1 1 1 0 0 3 0 0 0 1 5 1 0 0 1 0 0 17 0 1790.8833 Q6P087 Q6P087 137 153 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 0.00011702 186.16 By MS/MS 7.5 0.5 1 1 2 885310 885310 0 3867 1696 4003 8962;8963 7382 7382 1 11921 0 ESSLTEPVIVGLLK YHPQLAYCVVQFLEKESSLTEPVIVGLLKF KESSLTEPVIVGLLKFWPKTHSPKEVMFLN K E S L K F 0 0 0 0 0 0 2 1 0 1 3 1 0 0 1 2 1 0 0 2 0 0 14 0 1483.8498 Q14738 Q14738 354 367 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 2 0.00038194 164.33 By MS/MS 5 0 1 1 297410 297410 0 3868 1455 4004 8964 7383;7384 7383 2 2982.8 0 ESSNVVVTER PSSSLPTSLTIHHPRESSNVVVTERVIQPT IHHPRESSNVVVTERVIQPTSGMIGSLSMH R E S E R V 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 1 0 0 3 0 0 10 0 1118.5568 Q02413 Q02413 916 925 DSG1 Desmoglein-1 yes yes 2 6.0447E-06 175.65 By matching By MS/MS 5.9 3.18 1 1 1 1 1 1 1 1 2 1 9 2370800 74422 2296400 3869 1277 4005 8965;8966;8967;8968;8969;8970;8971;8972;8973;8974 7385;7386;7387;7388;7389 7387 5 4011.1 1694800 ESSSEQYVPDVFYK CLLPCKDAPELGYAKESSSEQYVPDVFYKD KESSSEQYVPDVFYKDVDKFGNEITQLARP K E S Y K D 0 0 0 1 0 1 2 0 0 0 0 1 0 1 1 3 0 0 2 2 0 0 14 0 1676.757 Q8TAT6 Q8TAT6 414 427 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 3.6559E-07 207.47 By MS/MS 5.5 0.5 1 1 2 2965200 2965200 0 3870 1977 4006 8975;8976 7390 7390 1 28455 0 ESSSESFISR ETEKRCALLAAQANKESSSESFISRLLAIV AQANKESSSESFISRLLAIVADLYEQEQYS K E S S R L 0 1 0 0 0 0 2 0 0 1 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1127.5095 Q9P2R3 Q9P2R3 44 53 ANKFY1 Rabankyrin-5 yes yes 2 0.0014473 114.97 By MS/MS 3 0 1 1 1119500 1119500 0 3871 2689 4007 8977 7391 7391 1 20484 0 ESSTVFELKR LMIRRHKTTIFTDAKESSTVFELKRIVEGI FTDAKESSTVFELKRIVEGILKRPPDEQRL K E S K R I 0 1 0 0 0 0 2 0 0 0 1 1 0 1 0 2 1 0 0 1 0 0 10 1 1194.6245 Q15370 Q15370 20 29 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.052748 89.029 By MS/MS 10 0 1 1 1017300 1017300 0 3872 1503 4008 8978 7392 7392 1 54828 0 ESTEFLQQNPVTEYMK FESQFLADTERFYTRESTEFLQQNPVTEYM STEFLQQNPVTEYMKKAEARLLEEQRRVQV R E S M K K 0 0 1 0 0 2 3 0 0 0 1 1 1 1 1 1 2 0 1 1 0 0 16 0 1942.8982 Q13616 Q13616 247 262 CUL1 Cullin-1 yes yes 2 6.6814E-17 263.44 By MS/MS 4.5 0.5 1 1 2 527880 527880 0 3873 1402 4009 8979;8980 7393 7393 1 42616 0 ESTEKGSPLGEVVEQGITR LNQIKVQEKYVWNKRESTEKGSPLGEVVEQ KGSPLGEVVEQGITRVRNATDAVGIVLKEL R E S T R V 0 1 0 0 0 1 4 3 0 1 1 1 0 0 1 2 2 0 0 2 0 0 19 1 2015.0171 P51398 P51398 214 232 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 7.2622E-18 187.56 By MS/MS 7.5 0.5 1 1 2 6761200 6761200 0 3874 993 4010 8981;8982 7394 7394 0 104750 0 ESTGAQVQVAGDMLPNSTER GSLIGKGGCKIKEIRESTGAQVQVAGDMLP QVQVAGDMLPNSTERAITIAGIPQSIIECV R E S E R A 2 1 1 1 0 2 2 2 0 0 1 0 1 0 1 2 2 0 0 2 0 0 20 0 2088.9746 P57721;Q15365;Q15366 Q15366 125 144 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2;3 2.1143E-59 342.28 By MS/MS By matching 7.2 0.4 4 1 4 1 16532000 16492000 39541 3875 1501;1500;1080 4011;4012 8983;8984;8985;8986;8987 7395;7396;7397 7397 604 3 257510 71213 ESTLHLVLR QLEDGRTLSDYNIQKESTLHLVLRLRGGAK DYNIQKESTLHLVLRLRGGAKKRKKKSYTT K E S L R L 0 1 0 0 0 0 1 0 1 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1066.6135 P62979;P0CG47;P0CG48;P62987 P62979 64 72 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 2 8.7808E-05 148.99 By MS/MS By MS/MS 4.19 2.88 3 3 3 1 1 1 1 1 1 1 13 3 98877000 98219000 658020 3876 1190;1191 4013 8988;8989;8990;8991;8992;8993;8994;8995;8996;8997;8998;8999;9000;9001;9002;9003 7398;7399;7400;7401;7402;7403;7404;7405;7406;7407;7408;7409;7410 7404 13 10186000 447360 ESTTSEQSAR YQEYNLANIIYYSLKESTTSEQSARMTAMD YYSLKESTTSEQSARMTAMDNASKNASEMI K E S A R M 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 10 0 1094.484 P36542 P36542 244 253 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.0003892 135.43 By MS/MS 8.5 1.12 1 1 1 1 4 857970 857970 0 3877 835 4014 9004;9005;9006;9007 7411;7412;7413;7414 7411 4 23519 0 ESVAPVLSVLTECAR LIFLEKRLHKTHRLKESVAPVLSVLTECAR ESVAPVLSVLTECARMHRPARKFLKAQVLP K E S A R M 2 1 0 0 1 0 2 0 0 0 2 0 0 0 1 2 1 0 0 3 0 0 15 0 1629.8396 Q9NPQ8 Q9NPQ8 329 343 RIC8A Synembryn-A yes yes 2 0.00037703 193.62 By MS/MS 5 0 1 1 272590 272590 0 3878 2535 4015 9008 7415 7415 1 2733.9 0 ESVDHLTIPSR ELEELSGAKISDLHRESVDHLTIPSRCGKG DLHRESVDHLTIPSRCGKGSLHRISEVFDC R E S S R C 0 1 0 1 0 0 1 0 1 1 1 0 0 0 1 2 1 0 0 1 0 0 11 0 1252.6412 P41252 P41252 501 511 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 3.9568E-06 178.84 By MS/MS 3 0 1 1 3089800 3089800 0 3879 871 4016 9009 7416 7416 1 56535 0 ESVEQQADSFK NLSLAVSDCFWKMVRESVEQQADSFKATRF KMVRESVEQQADSFKATRFNLETEWKNNYP R E S F K A 1 0 0 1 0 2 2 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 11 0 1266.5728 O60313 O60313 558 568 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0072241 98.04 By MS/MS 4.5 0.5 1 1 2 2228500 2228500 0 3880 254 4017 9010;9011 7417 7417 1 169280 0 ESVFTVEGGHR LKLLLGAGAVAYGVRESVFTVEGGHRAIFF YGVRESVFTVEGGHRAIFFNRIGGVQQDTI R E S H R A 0 1 0 0 0 0 2 2 1 0 0 0 0 1 0 1 1 0 0 2 0 0 11 0 1216.5836 Q99623 Q99623 38 48 PHB2 Prohibitin-2 yes yes 2 2.1316E-05 162.64 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 70254000 69889000 364510 3881 2254 4018 9012;9013;9014;9015;9016;9017 7418;7419;7420;7421;7422 7420 5 1040600 565740 ESVLTATSILNNPIVK DHIKGKQAYKEQIKRESVLTATSILNNPIV SVLTATSILNNPIVKARYERFVKGENPFEI R E S V K A 1 0 2 0 0 0 1 0 0 2 2 1 0 0 1 2 2 0 0 2 0 0 16 0 1697.9564 Q5BKZ1 Q5BKZ1 444 459 ZNF326 DBIRD complex subunit ZNF326 yes yes 2 7.083E-05 191.29 By MS/MS 5 0 1 1 273150 273150 0 3882 1600 4019 9018 7423 7423 1 2739.6 0 ESVPLDDQEKLPFTVVHER LQLRLMVPVTVVFTRESVPLDDQEKLPFTV LDDQEKLPFTVVHEREIPLKYKMKIKCRFQ R E S E R E 0 1 0 2 0 1 3 0 1 0 2 1 0 1 2 1 1 0 0 3 0 0 19 1 2237.1328 Q96S52 Q96S52 72 90 PIGS GPI transamidase component PIG-S yes yes 3 0.0020713 91.932 By MS/MS 5 0 1 1 2786700 2786700 0 3883 2230 4020 9019 7424 7424 1 27950 0 ESVVDYCNR WAKAKKGEEALFTTRESVVDYCNRLLKKQF ALFTTRESVVDYCNRLLKKQFFHRALKVMK R E S N R L 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 2 0 0 9 0 1140.487 Q99442 Q99442 76 84 SEC62 Translocation protein SEC62 yes yes 2 0.00042575 148.99 By MS/MS 6.5 0.5 1 1 2 1222300 1222300 0 3884 2244 4021 9020;9021 7425 7425 1 9497.9 0 ETAEALLQVLK GYVFQKAYLEFFTSRETAEALLQVLKKYEL FTSRETAEALLQVLKKYELRVNYHLVNVKG R E T L K K 2 0 0 0 0 1 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 11 0 1213.6918 P42898 P42898 520 530 MTHFR Methylenetetrahydrofolate reductase yes yes 2 0.0029661 109.29 By MS/MS 5.5 0.5 1 1 2 313070 313070 0 3885 891 4022 9022;9023 7426 7426 1 2456 0 ETAENYLGHTAK YSPSQIGAFVLMKMKETAENYLGHTAKNAV KMKETAENYLGHTAKNAVITVPAYFNDSQR K E T A K N 2 0 1 0 0 0 2 1 1 0 1 1 0 0 0 0 2 0 1 0 0 0 12 0 1332.631 P38646 P38646 176 187 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.5479E-14 217.02 By MS/MS 5 0 1 1 3615900 3615900 0 3886 850 4023 9024 7427;7428 7427 2 36265 0 ETAKELAQR GKVVVVTGANTGIGKETAKELAQRGARVYL NTGIGKETAKELAQRGARVYLACRDVEKGE K E T Q R G 2 1 0 0 0 1 2 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1044.5564 Q8TC12 Q8TC12 56 64 RDH11 Retinol dehydrogenase 11 yes yes 2 0.0046481 134.77 By MS/MS 8 0 1 1 1578900 1578900 0 3887 1988 4024 9025 7429 7429 1 19933 0 ETANAIVSQQTPQR ADQEIPETDWEVYLRETANAIVSQQTPQRL RETANAIVSQQTPQRLLEVRGRLYELLTHC R E T Q R L 2 1 1 0 0 3 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 14 0 1541.7798 P40938 P40938 257 270 RFC3 Replication factor C subunit 3 yes yes 2 9.6711E-18 313.05 By MS/MS 7.5 0.5 1 1 2 4376400 4376400 0 3888 864 4025 9026;9027 7430 7430 1 67974 0 ETAQALK CAAQGNEHYTGVAARETAQALKTLAQAARG HYTGVAARETAQALKTLAQAARGVAASTTD R E T L K T 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 759.41267 Q9Y4G6 Q9Y4G6 1125 1131 TLN2 Talin-2 yes yes 2 0.032313 102.98 By MS/MS 9 0 1 1 1777500 1777500 0 3889 2895 4026 9028 7431 7431 1 34982 0 ETARPSCEIVDGTR CQAKVLNSLTQQEKKETARPSCEIVDGTRE KETARPSCEIVDGTREASNTERTASDGKAV K E T T R E 1 2 0 1 1 0 2 1 0 1 0 0 0 0 1 1 2 0 0 1 0 0 14 1 1589.7468 Q92538 Q92538 607 620 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2;3 0.0020526 124.12 By MS/MS 2.33 0.471 2 1 3 744920 744920 0 3890 2050 4027 9029;9030;9031 7432;7433 7433 2 209250 0 ETCAQTLGVVLK RFGDFVSDEVVAPVRETCAQTLGVVLKHMN PVRETCAQTLGVVLKHMNETGVHKTVDVLL R E T L K H 1 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 2 0 0 2 0 0 12 0 1317.6962 O14981 O14981 369 380 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 3.266E-05 172.88 By MS/MS 3 0.816 1 1 1 3 489000 489000 0 3891 154 4028 9032;9033;9034 7434 7434 1 99139 0 ETDCGVHINAGPEIGVASTK LTVGITNTVGSSISRETDCGVHINAGPEIG VHINAGPEIGVASTKAYTSQFVSLVMFALM R E T T K A 2 0 1 1 1 0 2 3 1 2 0 1 0 0 1 1 2 0 0 2 0 0 20 0 2053.9739 Q06210;O94808 Q06210 475 494 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes no 3 0.0025207 89.507 By MS/MS 5 0 1 1 4966700 4966700 0 3892 1295 4029 9035 7435 7435 1 49814 0 ETEGDVTSVK GISSSSVLHGMVFKKETEGDVTSVKDAKIA MVFKKETEGDVTSVKDAKIAVYSCPFDGMI K E T V K D 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 1 2 0 0 2 0 0 10 0 1063.5033 P50990 P50990 226 235 CCT8 T-complex protein 1 subunit theta yes yes 2 0.040689 76.827 By MS/MS By matching 6.33 0.471 2 1 2 1 8330400 8297800 32587 3893 984 4030 9036;9037;9038 7436 7436 1 96648 33392 ETEGDVTSVKDAK GISSSSVLHGMVFKKETEGDVTSVKDAKIA KKETEGDVTSVKDAKIAVYSCPFDGMITET K E T A K I 1 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 2 0 0 2 0 0 13 1 1377.6624 P50990 P50990 226 238 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0001005 169.82 By MS/MS By matching 6.33 0.471 2 1 2 1 19459000 19404000 55742 3894 984 4031 9039;9040;9041 7437;7438 7437 2 152970 57120 ETENDDLTNVIQK PFIRPVMQALLHIIRETENDDLTNVIQKMI IRETENDDLTNVIQKMICEYSEEVTPIAVE R E T Q K M 0 0 2 2 0 1 2 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1517.7209 O95373 O95373 552 564 IPO7 Importin-7 yes yes 2 9.7811E-12 240 By MS/MS 4 0.816 1 1 1 3 6392600 6392600 0 3895 406 4032 9042;9043;9044 7439;7440;7441 7439 3 289810 0 ETENDDVTNVIQK PHVRPIMQELLHIVRETENDDVTNVIQKMI VRETENDDVTNVIQKMICEYSQEVASIAVD R E T Q K M 0 0 2 2 0 1 2 0 0 1 0 1 0 0 0 0 2 0 0 2 0 0 13 0 1503.7053 O15397 O15397 553 565 IPO8 Importin-8 yes yes 2 1.928E-11 231.92 By MS/MS 4 0.816 1 1 1 3 2736900 2736900 0 3896 188 4033 9045;9046;9047 7442 7442 1 217070 0 ETESQLLPDVGAIVTCK KSSENGALPVVSVVRETESQLLPDVGAIVT ESQLLPDVGAIVTCKVSSINSRFAKVHILY R E T C K V 1 0 0 1 1 1 2 1 0 1 2 1 0 0 1 1 2 0 0 2 0 0 17 0 1858.9346 Q9Y3B2 Q9Y3B2 58 74 EXOSC1 Exosome complex component CSL4 yes yes 2 0.00033308 171.36 By MS/MS 9 0 1 1 107340 107340 0 3897 2863 4034 9048 7443;7444 7443 2 2112.4 0 ETFLTSPEELYR RPVGVKIPTCKITLKETFLTSPEELYRVFT TLKETFLTSPEELYRVFTTQELVQAFTHAP K E T Y R V 0 1 0 0 0 0 3 0 0 0 2 0 0 1 1 1 2 0 1 0 0 0 12 0 1483.7195 O95433 O95433 213 224 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 2 4.3751E-05 169.41 By MS/MS 7 0 1 1 961740 961740 0 3898 411 4035 9049 7445 7445 1 15098 0 ETGEHLVHVK KRLRNGHVGISFVPKETGEHLVHVKKNGQH SFVPKETGEHLVHVKKNGQHVASSPIPVVI K E T V K K 0 0 0 0 0 0 2 1 2 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1147.5986 P21333 P21333 2015 2024 FLNA Filamin-A yes yes 2 0.052156 80.438 By MS/MS 2 0.816 1 1 1 3 624960 624960 0 3899 677 4036 9050;9051;9052 7446 7446 0 159810 0 ETGENVLHVR FGTPVINLGTRQIGRETGENVLHVRDADTQ RQIGRETGENVLHVRDADTQDKILQALHLQ R E T V R D 0 1 1 0 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1152.5887 Q9Y223 Q9Y223 326 335 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0014095 115.7 By MS/MS 5 0 1 1 1538800 1538800 0 3900 2808 4037 9053 7447 7447 1 15433 0 ETGGAEGTGDAVLGEK PVVPAEKRSSGERARETGGAEGTGDAVLGE TGGAEGTGDAVLGEKVLEEALLSREHVLEL R E T E K V 2 0 0 1 0 0 3 5 0 0 1 1 0 0 0 0 2 0 0 1 0 0 16 0 1489.6896 Q92667 Q92667 198 213 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.00029092 171.49 By MS/MS 3 0 1 1 453770 453770 0 3901 2068 4038 9054 7448 7448 1 8302.8 0 ETGVDLTKDNMALQR FDQALLRHIVKEFKRETGVDLTKDNMALQR ETGVDLTKDNMALQRVREAAEKAKCELSSS R E T Q R V 1 1 1 2 0 1 1 1 0 0 2 1 1 0 0 0 2 0 0 1 0 0 15 1 1689.8356 P38646 P38646 293 307 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 7.9546E-33 294.01 By MS/MS 5.4 0.49 3 2 5 17230000 17230000 0 3902 850 4039;4040 9055;9056;9057;9058;9059 7449;7450;7451 7451 434 3 169100 0 ETGVPIAGR CFIPCTPKGCLELIKETGVPIAGRHAVVVG CLELIKETGVPIAGRHAVVVGRSKIVGAPM K E T G R H 1 1 0 0 0 0 1 2 0 1 0 0 0 0 1 0 1 0 0 1 0 0 9 0 898.48723 P11586 P11586 158 166 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.02928 84.916 By MS/MS 4 0 1 1 1022600 1022600 0 3903 582 4041 9060 7452 7452 1 96238 0 ETGYTYILPK HLRTNHIYVSSDDIKETGYTYILPKNVLKK SDDIKETGYTYILPKNVLKKFICISDLRAQ K E T P K N 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 2 0 2 0 0 0 10 0 1183.6125 Q6P2Q9 Q6P2Q9 2099 2108 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0069251 101.25 By MS/MS 2 0.816 1 1 1 3 1079100 1079100 0 3904 1708 4042 9061;9062;9063 7453 7453 1 322920 0 ETHASAPVK VKRRMKVEMERGLSKETHASAPVKMLPTYV ERGLSKETHASAPVKMLPTYVCATPDGTEK K E T V K M 2 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 9 0 938.48214 P52789 P52789 502 510 HK2 Hexokinase-2 yes yes 2 0.0031858 112.41 By MS/MS 4 0 1 1 685990 685990 0 3905 1023 4043 9064 7454 7454 1 64556 0 ETIDNNSVSSPLQSLQQR MQNWDAAMEDLTRLKETIDNNSVSSPLQSL DNNSVSSPLQSLQQRTWLIHWSLFVFFNHP K E T Q R T 0 1 2 1 0 3 1 0 0 1 2 0 0 0 1 4 1 0 0 1 0 0 18 0 2014.992 P60228 P60228 194 211 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 9.1739E-17 250.05 By MS/MS 7 0.816 1 1 1 3 18592000 18592000 0 3906 1090 4044 9065;9066;9067 7455;7456 7455 2 152630 0 ETIIAFAWEPNGSK RMREKQVPVDVVEMKETIIAFAWEPNGSKF KETIIAFAWEPNGSKFAVLHGEAPRISVSF K E T S K F 2 0 1 0 0 0 2 1 0 2 0 1 0 1 1 1 1 1 0 0 0 0 14 0 1561.7777 P55884 P55884 563 576 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.014165 88.155 By MS/MS 4 0 1 1 128980 128980 0 3907 1065 4045 9068 7457 7457 0 12138 0 ETIPLQETSLYTQDR VDSEWFGFYRSGQAKETIPLQETSLYTQDR ETIPLQETSLYTQDRLGLKEMDNAGQLVFL K E T D R L 0 1 0 1 0 2 2 0 0 1 2 0 0 0 1 1 3 0 1 0 0 0 15 0 1792.8843 P50897 P50897 254 268 PPT1 Palmitoyl-protein thioesterase 1 yes yes 2 0.00056687 154.23 By MS/MS 7.5 0.5 1 1 2 1632400 1632400 0 3908 982 4046 9069;9070 7458 7458 1 23504 0 ETITAPVPFDFTHK YGCPCITGKPKVAFRETITAPVPFDFTHKK RETITAPVPFDFTHKKQSGGAGQYGKVIGV R E T H K K 1 0 0 1 0 0 1 0 1 1 0 1 0 2 2 0 3 0 0 1 0 0 14 0 1601.809 Q96RP9 Q96RP9 527 540 GFM1 Elongation factor G, mitochondrial yes yes 2 0.023263 82.494 By MS/MS 5 0 1 1 640550 640550 0 3909 2223 4047 9071 7459 7459 1 6424.4 0 ETLAQLQQEFQR ESQLRDLERQSEQQRETLAQLQQEFQRAQA QQRETLAQLQQEFQRAQAAKAGAPGKA___ R E T Q R A 1 1 0 0 0 4 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 12 0 1489.7525 O15212 O15212 106 117 PFDN6 Prefoldin subunit 6 yes yes 2 6.8401E-09 218.55 By MS/MS 10 0 1 1 300930 300930 0 3910 170 4048 9072 7460 7460 1 16219 0 ETLDQINQELIQAK NTLLNFTDNFDDFRRETLDQINQELIQAKK RETLDQINQELIQAKKLLQDISEARCKGLQ R E T A K K 1 0 1 1 0 3 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 14 0 1641.8574 Q63HN8 Q63HN8 1391 1404 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 7.9125E-05 196.11 By MS/MS 1 0 1 1 113920 113920 0 3911 1664 4049 9073 7461 7461 1 27450 0 ETLEQQKR IVGLSVETERKKLPKETLEQQKRICEMAAY ERKKLPKETLEQQKRICEMAAYFTHSNLQP K E T K R I 0 1 0 0 0 2 2 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 1 1030.5407 P53621 P53621 1076 1083 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.007989 139.97 By MS/MS 2 1 1 1 2 963840 963840 0 3912 1034 4050 9074;9075 7462;7463 7463 2 17636 0 ETLKNSALSAQLR LSLFTSLGLSEQKARETLKNSALSAQLREA ARETLKNSALSAQLREAATQAQQTLGSTID R E T L R E 2 1 1 0 0 1 1 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 13 1 1429.7889 P47897 P47897 22 34 QARS Glutamine--tRNA ligase yes yes 2;3 0.0022225 142.97 By MS/MS 4 0 2 2 3655000 3655000 0 3913 928 4051 9076;9077 7464;7465 7465 2 343960 0 ETLLNSATTSLNSK EILTDMSRPVELSDRETLLNSATTSLNSKV RETLLNSATTSLNSKVVSQYSSLLSPMSVN R E T S K V 1 0 2 0 0 0 1 0 0 0 3 1 0 0 0 3 3 0 0 0 0 0 14 0 1477.7624 P50991 P50991 161 174 CCT4 T-complex protein 1 subunit delta yes yes 2 1.0105E-23 272.65 By MS/MS By MS/MS 6.57 2.72 1 3 1 1 1 6 1 36553000 36405000 148180 3914 985 4052 9078;9079;9080;9081;9082;9083;9084 7466;7467;7468;7469;7470 7469 5 324930 151840 ETLPELPSVTR AGADPQQVINIDQIRETLPELPSVTREKLV DQIRETLPELPSVTREKLVQQYGMLLEHSF R E T T R E 0 1 0 0 0 0 2 0 0 0 2 0 0 0 2 1 2 0 0 1 0 0 11 0 1240.6663 O75879 O75879 371 381 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.00033955 117.02 By MS/MS 6 0 1 1 2707500 2707500 0 3915 351 4053 9085 7471 7471 1 18612 0 ETLQQHK KGVVDSDDLPLNVSRETLQQHKLLKVIRKK DLPLNVSRETLQQHKLLKVIRKKLVRKTLD R E T H K L 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 882.45593 P14625 P14625 449 455 HSP90B1 Endoplasmin yes yes 2 0.043896 94.262 By MS/MS 4.5 0.5 1 1 2 981460 981460 0 3916 615 4054 9086;9087 7472 7472 1 83385 0 ETLVYLTHLDYVDTER FMKDTDSINLYKNMRETLVYLTHLDYVDTE TLVYLTHLDYVDTERIMTEKLHNQVNGTEW R E T E R I 0 1 0 2 0 0 2 0 1 0 3 0 0 0 0 0 3 0 2 2 0 0 16 0 1965.9684 O14980 O14980 459 474 XPO1 Exportin-1 yes yes 3 0.00049147 129.17 By MS/MS 4 0 1 1 417620 417620 0 3917 153 4055 9088 7473 7473 1 39301 0 ETMQFLNDR NCNWFCEGSFNGSEKETMQFLNDRLASYLE FNGSEKETMQFLNDRLASYLEKVRQLERDN K E T D R L 0 1 1 1 0 1 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 9 0 1152.5234 CON__O76011;CON__Q8IUT8;O76011;CON__Q6IFU5;Q6A162;CON__Q14525;Q14525;CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009;Q14532;CON__Q14532 CON__Q14525 58 66 KRT34;KRT40;KRT33B;KRT31;KRT33A;KRT32 Keratin, type I cuticular Ha4;Keratin, type I cytoskeletal 40;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha2 no no 2 0.00010701 168.25 By MS/MS 10 0 1 1 373610 0 373610 + 3918 59;36;61 4056 9089 7474 7474 14 1 0 478330 ETNISYSQEADDR TPPSVVNEDFLHDLKETNISYSQEADDRVF LKETNISYSQEADDRVFRAHGHCLHEIFLL K E T D R V 1 1 1 2 0 1 2 0 0 1 0 0 0 0 0 2 1 0 1 0 0 0 13 0 1526.6485 O00116 O00116 170 182 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 6.8966E-05 176.87 By MS/MS 5 0 1 1 568280 568280 0 3919 80 4057 9090 7475 7475 1 5699.6 0 ETNISYSQEADDRVFR TPPSVVNEDFLHDLKETNISYSQEADDRVF TNISYSQEADDRVFRAHGHCLHEIFLLREG K E T F R A 1 2 1 2 0 1 2 0 0 1 0 0 0 1 0 2 1 0 1 1 0 0 16 1 1928.8864 O00116 O00116 170 185 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 0.041617 63.185 By MS/MS 5 0 1 1 1314900 1314900 0 3920 80 4058 9091 7476 7476 1 13188 0 ETPALTINR IYLARHVGLRVGIPKETPALTINRLCGSGF RVGIPKETPALTINRLCGSGFQSIVNGCQE K E T N R L 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 9 0 1013.5506 P42765 P42765 82 90 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 0.0031858 112.41 By MS/MS 7 0 1 1 3062900 3062900 0 3921 887 4059 9092 7477 7477 1 48082 0 ETPPPLVPPAAR ______________________________ MRKETPPPLVPPAAREWNLPPNAPACMERQ K E T A R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 5 0 1 0 0 1 0 0 12 0 1243.6925 Q9BQA1 Q9BQA1 4 15 WDR77 Methylosome protein 50 yes yes 2 0.047169 70.816 By MS/MS By matching 7.33 0.471 2 1 2 1 5120300 4731000 389360 3922 2286 4060 9093;9094;9095 7478 7478 1 72239 701220 ETQALILAPTR TFSISVLQCLDIQVRETQALILAPTRELAV IQVRETQALILAPTRELAVQIQKGLLALGD R E T T R E 2 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 2 0 0 0 0 0 11 0 1211.6874 P38919 P38919 106 116 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 2 0.0071801 98.156 By MS/MS 6.5 0.5 1 1 2 3332700 3332700 0 3923 851 4061 9096;9097 7479 7479 1 27271 0 ETQDPTAQSLAASLSTR QEALDKLLSFTHKLRETQDPTAQSLAASLS QDPTAQSLAASLSTRQLLRISRRLSQYPNE R E T T R Q 3 1 0 1 0 2 1 0 0 0 2 0 0 0 1 3 3 0 0 0 0 0 17 0 1774.8697 A3KMH1 A3KMH1 644 660 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 2.2882E-07 238.67 By MS/MS 2 0 1 1 534240 534240 0 3924 14 4062 9098 7480 7480 1 180700 0 ETQELVSEAYPILEQK VIILEDELEKLVCTKETQELVSEAYPILEQ TQELVSEAYPILEQKLKLIQPHVQASNNCW K E T Q K L 1 0 0 0 0 2 4 0 0 1 2 1 0 0 1 1 1 0 1 1 0 0 16 0 1875.9466 Q9HBM0 Q9HBM0 459 474 VEZT Vezatin yes yes 2 7.7294E-07 203.74 By MS/MS 4 0 1 1 746970 746970 0 3925 2507 4063 9099 7481 7481 1 70295 0 ETQNMAWSKPR GAAFGAMNGLRLGLKETQNMAWSKPRNVQI LGLKETQNMAWSKPRNVQILNMVTRQGALW K E T P R N 1 1 1 0 0 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 11 1 1346.6401 O14925 O14925 102 112 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 2 0.0067225 114.4 By MS/MS 9 0 1 1 354160 354160 0 3926 145 4064 9100 7482 7482 1 6970 0 ETQSQLETER RIEERCRRKLEDSTRETQSQLETERSRYQR EDSTRETQSQLETERSRYQREIDKLRQRPY R E T E R S 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 10 0 1219.5681 P15924 P15924 1923 1932 DSP Desmoplakin yes yes 2 1.4779E-05 171.33 By MS/MS By MS/MS 5.43 3.5 1 1 1 1 2 1 5 2 3006700 2676600 330150 3927 628 4065 9101;9102;9103;9104;9105;9106;9107 7483;7484;7485;7486 7485 4 674520 188730 ETQVILLDTPGIISPGK VHTTRCQALGVITEKETQVILLDTPGIISP QVILLDTPGIISPGKQKRHHLELSLLEDPW K E T G K Q 0 0 0 1 0 1 1 2 0 3 2 1 0 0 2 1 2 0 0 1 0 0 17 0 1779.9982 O75616 O75616 160 176 ERAL1 GTPase Era, mitochondrial yes yes 2 3.9204E-44 316.12 By MS/MS 8 0.816 1 1 1 3 2352500 2352500 0 3928 339 4066 9108;9109;9110 7487 7487 1 36825 0 ETSAATLSPGASSR SDTSSVSLEVSPGSRETSAATLSPGASSRG RETSAATLSPGASSRGWDDGDTRSEHSYSE R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 Q9Y6I9 Q9Y6I9 237 250 TEX264 Testis-expressed sequence 264 protein yes yes 2 8.9327E-05 179.94 By MS/MS 7 0 1 1 4587600 4587600 0 3929 2945 4067 9111 7488 7488 1 72017 0 ETSALEASSPLLTGQILER SVEKIEKILNSQSSKETSALEASSPLLTGQ LEASSPLLTGQILERIATEFNQLQFHAVQS K E T E R I 2 1 0 0 0 1 3 1 0 1 4 0 0 0 1 3 2 0 0 0 0 0 19 0 2014.0582 Q14746 Q14746 154 172 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 2 4.5032E-34 305.48 By MS/MS 5 0 1 1 1068500 1068500 0 3930 1457 4068 9112 7489 7489 1 10716 0 ETSELGGSDVSILDTTR AEEAMETESSEKVGKETSELGGSDVSILDT SELGGSDVSILDTTRLLRSCVQSAVGMLRD K E T T R L 0 1 0 2 0 0 2 2 0 1 2 0 0 0 0 3 3 0 0 1 0 0 17 0 1778.8534 Q63HN8 Q63HN8 3518 3534 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0058422 103.97 By MS/MS 1.5 0.5 1 1 2 218030 218030 0 3931 1664 4069 9113;9114 7490 7490 0 63041 0 ETSESQDSEKENTKK SKKDKQSVRTEETSKETSESQDSEKENTKK ETSESQDSEKENTKKDLLGIIKGMKVELST K E T K K D 0 0 1 1 0 1 4 0 0 0 0 3 0 0 0 3 2 0 0 0 0 0 15 2 1738.7857 Q92665 Q92665 83 97 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0042928 146.36 By MS/MS 7 0 1 1 73972 73972 0 3932 2067 4070 9115 7491 7491 1 1161.2 0 ETSMVHELNR AKQLKEQQMVMRGHRETSMVHELNRYIPTA MRGHRETSMVHELNRYIPTAAAFGGLCIGA R E T N R Y 0 1 1 0 0 0 2 0 1 0 1 0 1 0 0 1 1 0 0 1 0 0 10 0 1214.5714 P61619 P61619 406 415 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.010764 89.029 By MS/MS 1 0 1 1 123070 123070 0 3933 1127 4071 9116 7492 7492 1 29655 0 ETSNLYK VDPRKDAHSTLLSKKETSNLYKIQFHNVKP HSTLLSKKETSNLYKIQFHNVKPEYLDAYN K E T Y K I 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 7 0 853.41815 Q9BPW8;O75323 Q9BPW8 67 73 NIPSNAP1;GBAS Protein NipSnap homolog 1;Protein NipSnap homolog 2 no no 2 0.051227 89.903 By MS/MS 8 0 1 1 6136400 6136400 0 3934 2278;310 4072 9117 7493 7493 1 77471 0 ETSSLESFVR APMSSSASVPNLSSRETSSLESFVRRVANI NLSSRETSSLESFVRRVANIARTNATNNMN R E T V R R 0 1 0 0 0 0 2 0 0 0 1 0 0 1 0 3 1 0 0 1 0 0 10 0 1153.5615 Q9ULT8 Q9ULT8 1541 1550 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00075469 128.36 By MS/MS 2.5 1.12 1 1 1 1 4 1911300 1911300 0 3935 2774 4073 9118;9119;9120;9121 7494;7495;7496 7495 3 359350 0 ETTDTDTADQVIASFK SGLVTFQAFIDFMSRETTDTDTADQVIASF TTDTDTADQVIASFKVLAGDKNFITAEELR R E T F K V 2 0 0 3 0 1 1 0 0 1 0 1 0 1 0 1 4 0 0 1 0 0 16 0 1740.8054 O43707 O43707 838 853 ACTN4 Alpha-actinin-4 yes yes 2 5.2497E-24 279.77 By MS/MS 4 0 1 1 1365300 1365300 0 3936 229 4074 9122 7497;7498 7497 2 128480 0 ETTIDGEELVK SSRSHSVFSVTIHMKETTIDGEELVKIGKL IHMKETTIDGEELVKIGKLNLVDLAGSENI K E T V K I 0 0 0 1 0 0 3 1 0 1 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1232.6136 P52732 P52732 247 257 KIF11 Kinesin-like protein KIF11 yes yes 2 0.0013953 113.71 By MS/MS 3.5 0.5 1 1 2 1029700 1029700 0 3937 1021 4075 9123;9124 7499 7499 1 50119 0 ETTNIFSNCGCVR ERVIDLLRVIHVAGKETTNIFSNCGCVRAE GKETTNIFSNCGCVRAEGDISNVANGFKSH K E T V R A 0 1 2 0 2 0 1 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 13 0 1556.6712 Q9UBB4 Q9UBB4 346 358 ATXN10 Ataxin-10 yes yes 2 5.7347E-08 218.55 By MS/MS 6.5 0.5 1 1 2 3575600 3575600 0 3938 2693 4076 9125;9126 7500 7500 1 47422 0 ETTVGAVTVTHK TFCRWLENSLKGLPKETTVGAVTVTHKQLT LPKETTVGAVTVTHKQLTDFHKQVTSAEEC K E T H K Q 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 4 0 0 3 0 0 12 0 1241.6616 Q9Y5L0 Q9Y5L0 882 893 TNPO3 Transportin-3 yes yes 2 5.1148E-05 167.09 By MS/MS 4 0 1 1 1325900 1325900 0 3939 2915 4077 9127 7501 7501 1 124780 0 ETVSEESNVLCLSK ACIPIKKSDPVVSYRETVSEESNVLCLSKS RETVSEESNVLCLSKSPNKHNRLYMKARPF R E T S K S 0 0 1 0 1 0 3 0 0 0 2 1 0 0 0 3 1 0 0 2 0 0 14 0 1593.7556 P13639 P13639 581 594 EEF2 Elongation factor 2 yes yes 2 4.3038E-24 278.35 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 90243000 90243000 0 3940 602 4078 9128;9129;9130;9131;9132;9133;9134;9135 7502;7503;7504;7505;7506;7507 7503 6 6677500 0 ETYCPVIVDNLIQLCK SHARLWQTTEEIPKRETYCPVIVDNLIQLC TYCPVIVDNLIQLCKSQILKHPSLARRICV R E T C K S 0 0 1 1 2 1 1 0 0 2 2 1 0 0 1 0 1 0 1 2 0 0 16 0 1963.9747 Q9BZE1 Q9BZE1 174 189 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 0.00011116 184.34 By MS/MS 7 0 1 1 87649 87649 0 3941 2376 4079 9136 7508 7508 1 1375.9 0 ETYTEDFIKK TAFVIPKKNVPTSKRETYTEDFIKKQIEEF PTSKRETYTEDFIKKQIEEFNIGKRHLANM R E T K K Q 0 0 0 1 0 0 2 0 0 1 0 2 0 1 0 0 2 0 1 0 0 0 10 1 1272.6238 P82933 P82933 67 76 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.00072962 146.23 By MS/MS 7 0 1 1 8605700 8605700 0 3942 1239 4080 9137 7509 7509 1 135090 0 ETYYLSDSPLLGPPVGEPR EKEKEMKKSPTSLKRETYYLSDSPLLGPPV LSDSPLLGPPVGEPRLLASSPALPSSGAQA R E T P R L 0 1 0 1 0 0 2 2 0 0 3 0 0 0 4 2 1 0 2 1 0 0 19 0 2089.0368 Q9NYZ3 Q9NYZ3 145 163 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 2.5206E-06 202.25 By MS/MS 4 0 1 1 241250 241250 0 3943 2641 4081 9138 7510;7511 7511 2 22703 0 EVAAGYLVPLLR ARGSGGAGALPEAAREVAAGYLVPLLRSLR AAREVAAGYLVPLLRSLRGRPAGGPDPSLQ R E V L R S 2 1 0 0 0 0 1 1 0 0 3 0 0 0 1 0 0 0 1 2 0 0 12 0 1299.7551 Q13395 Q13395 63 74 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.001271 120.12 By MS/MS 5 3 1 1 2 94149 94149 0 3944 1376 4082 9139;9140 7512;7513 7512 2 9373 0 EVADSYAQNAK TVSTIDEEEEEIEAREVADSYAQNAKVIEK IEAREVADSYAQNAKVIEKQLERKGMSKRR R E V A K V 3 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 11 0 1194.5517 Q9H5V9 Q9H5V9 173 183 CXorf56 UPF0428 protein CXorf56 yes yes 2 2.4361E-05 159.79 By MS/MS 8 0 1 1 733540 733540 0 3945 2454 4083 9141 7514 7514 1 9260.8 0 EVADVLVDGYNVHYGAR KRAKQRHNITLLWDREVADVLVDGYNVHYG ADVLVDGYNVHYGARSIKHEVERRVVNQLA R E V A R S 2 1 1 2 0 0 1 2 1 0 1 0 0 0 0 0 0 0 2 4 0 0 17 0 1875.9115 Q9H078 Q9H078 604 620 CLPB Caseinolytic peptidase B protein homolog yes yes 2 1.6993E-33 305.3 By MS/MS 6 0 1 1 2809100 2809100 0 3946 2402 4084 9142 7515 7515 1 19310 0 EVAESCKDIK NIMRMSDGLFLQKCREVAESCKDIKFNEMY LQKCREVAESCKDIKFNEMYLDTVCLNMVQ R E V I K F 1 0 0 1 1 0 2 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1177.5649 P50213 P50213 217 226 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.0017257 136.99 By MS/MS 7 0 1 1 3322900 3322900 0 3947 971 4085 9143 7516 7516 1 52163 0 EVAGAKPHITAAEGK ELEKMKSVIENAKKKEVAGAKPHITAAEGK EVAGAKPHITAAEGKLHNMIVDLDNVVKKV K E V G K L 4 0 0 0 0 0 2 2 1 1 0 2 0 0 1 0 1 0 0 1 0 0 15 1 1477.7889 Q16891 Q16891 316 330 IMMT MICOS complex subunit MIC60 yes yes 3 0.034028 66.215 By MS/MS 4.5 0.5 1 1 2 2553500 2553500 0 3948 1563 4086 9144;9145 7517 7517 1 188660 0 EVAGLVTLK KAAAGIEKGARQTGKEVAGLVTLKHVYEIA ARQTGKEVAGLVTLKHVYEIARIKAQDEAF K E V L K H 1 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 928.55933 Q9Y3B7 Q9Y3B7 107 115 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0014521 131.22 By MS/MS 9 0 1 1 1801300 1801300 0 3949 2866 4087 9146 7518 7518 1 35451 0 EVANSTANLVK TTNPTAKRQFVQSAKEVANSTANLVKTIKA QSAKEVANSTANLVKTIKALDGAFTEENRA K E V V K T 2 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1144.6088 Q9Y490;Q9Y4G6 Q9Y490 1531 1541 TLN1;TLN2 Talin-1;Talin-2 no no 2 0.00026942 137.05 By MS/MS 2.5 0.5 1 1 2 2442400 2442400 0 3950 2888;2895 4088 9147;9148 7519;7520 7519 2 706650 0 EVAQAVLL EQTEEELERAASTIKEVAQAVLL_______ RAASTIKEVAQAVLL_______________ K E V L L - 2 0 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 841.49092 O15269 O15269 466 473 SPTLC1 Serine palmitoyltransferase 1 yes yes 1 0.047583 81.381 By MS/MS 5.5 0.5 1 1 2 2544500 2544500 0 3951 177 4089 9149;9150 7521 7521 0 17744 0 EVAQGLCDAIR FQLVEEAWLLPAVGREVAQGLCDAIRLDGG AVGREVAQGLCDAIRLDGGLDLLLRLLQAP R E V I R L 2 1 0 1 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1230.6027 Q6SZW1 Q6SZW1 111 121 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.0035993 123.51 By MS/MS 5 0 1 1 0 0 0 3952 1726 4090 9151 7522 7522 1 0 0 EVASNSELVQSSR DAETWFLSKTEELNKEVASNSELVQSSRSE NKEVASNSELVQSSRSEVTELRRVLQGLEI K E V S R S 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 4 0 0 0 2 0 0 13 0 1404.6845 CON__P08779;P08779 CON__P08779 318 330 KRT16 Keratin, type I cytoskeletal 16 yes no 2 2.1444E-28 280.38 By MS/MS By MS/MS 2.2 0.748 1 2 2 2 3 726920 328530 398390 + 3953 47 4091 9152;9153;9154;9155;9156 7523;7524 7523 2 44463 154570 EVATNSELVQSGK DAEEWFFTKTEELNREVATNSELVQSGKSE NREVATNSELVQSGKSEISELRRTMQNLEI R E V G K S 1 0 1 0 0 1 2 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 13 0 1360.6834 CON__Q04695;Q04695;CON__P02533;P02533 CON__P02533 316 328 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2 1.5388E-20 244.71 By MS/MS By MS/MS 5.37 2.89 2 2 2 2 2 2 2 1 2 2 9 10 30876000 15579000 15298000 + 3954 39;57 4092 9157;9158;9159;9160;9161;9162;9163;9164;9165;9166;9167;9168;9169;9170;9171;9172;9173;9174;9175 7525;7526;7527;7528;7529;7530;7531;7532;7533;7534;7535;7536;7537;7538;7539;7540;7541;7542;7543;7544;7545;7546;7547 7528 21 1253300 7906700 EVATNSELVQSGKSEISELRR DAEEWFFTKTEELNREVATNSELVQSGKSE ELVQSGKSEISELRRTMQNLEIELQSQLSM R E V R R T 1 2 1 0 0 1 4 1 0 1 2 1 0 0 0 4 1 0 0 2 0 0 21 2 2331.203 CON__Q04695;Q04695;CON__P02533;P02533 CON__P02533 316 336 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 3 0.0051252 92.264 By matching By MS/MS 3.5 0.5 1 1 1 1 878070 338170 539900 + 3955 39;57 4093 9176;9177 7548 7548 1 31824 68722 EVCFTIENK AFPAREFLRKKLIGKEVCFTIENKTPQGRE KKLIGKEVCFTIENKTPQGREYGMIYLGKD K E V N K T 0 0 1 0 1 0 2 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1138.5329 Q7KZF4 Q7KZF4 94 102 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0015156 127.46 By MS/MS 4 0 1 1 1863100 1863100 0 3956 1755 4094 9178 7549 7549 1 175330 0 EVCGFAPYER GRLTKHTKFVRDMIREVCGFAPYERRAMEL RDMIREVCGFAPYERRAMELLKVSKDKRAL R E V E R R 1 1 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 10 0 1226.539 Q9Y3U8 Q9Y3U8 46 55 RPL36 60S ribosomal protein L36 yes yes 2 0.0012002 119.75 By MS/MS By matching 10 0 2 1 1 3243200 3181700 61556 3957 2885 4095 9179;9180 7550 7550 1 171480 78809 EVCQLLPFLVR ILGAWLAEETSSLRKEVCQLLPFLVRYAKT SLRKEVCQLLPFLVRYAKTLYEEAEEANDL K E V V R Y 0 1 0 0 1 1 1 0 0 0 3 0 0 1 1 0 0 0 0 2 0 0 11 0 1372.7537 Q9UBB6 Q9UBB6 413 423 NCDN Neurochondrin yes yes 2 0.0013375 114.86 By MS/MS 5.5 0.5 1 1 2 405900 405900 0 3958 2694 4096 9181;9182 7551 7551 1 3569.1 0 EVDDLGPEVGDIK TGQEEIDEACKRIKREVDDLGPEVGDIKII KREVDDLGPEVGDIKIIPLYSTLPPQQQQR R E V I K I 0 0 0 3 0 0 2 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1384.6722 O43143 O43143 372 384 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.00024942 189.58 By MS/MS 4 0 1 1 1202400 1202400 0 3959 190 4097 9183 7552 7552 1 113160 0 EVDEQMLAIQSK YLTVATVFRGRMSMKEVDEQMLAIQSKNSS SMKEVDEQMLAIQSKNSSYFVEWIPNNVKV K E V S K N 1 0 0 1 0 2 2 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1389.681 Q13509;Q9BUF5 Q13509 325 336 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 2 4.206E-18 261.75 By MS/MS 6.5 0.5 1 1 2 5333500 5333500 0 3960 1393;2324 4098 9184;9185 7553 7553 1 38847 0 EVDEQMLNVQNK YLTVAAVFRGRMSMKEVDEQMLNVQNKNSS SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 P68371;P07437;Q13885;Q9BVA1 P68371 325 336 TUBB4B;TUBB;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 1.2072E-56 355.82 By MS/MS By MS/MS 7 1.28 1 4 2 2 2 10 1 149480000 149310000 165930 3961 1212;509;1412;2331 4099;4100 9186;9187;9188;9189;9190;9191;9192;9193;9194;9195;9196 7554;7555;7556;7557;7558;7559;7560;7561;7562;7563;7564 7560 207 10 1165900 170030 EVDGLDVSK ANAIEEVNLAYENVKEVDGLDVSKEGTEAW AYENVKEVDGLDVSKEGTEAWEAAMKRYDE K E V S K E 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 0 960.47639 Q14204 Q14204 532 540 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.044646 78.264 By MS/MS 1.5 0.5 1 1 2 421520 421520 0 3962 1433 4101 9197;9198 7565 7565 1 115870 0 EVDIGIPDATGR NSIDPALRRFGRFDREVDIGIPDATGRLEI FDREVDIGIPDATGRLEILQIHTKNMKLAD R E V G R L 1 1 0 2 0 0 1 2 0 2 0 0 0 0 1 0 1 0 0 1 0 0 12 0 1241.6252 P55072 P55072 366 377 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00039976 137.46 By MS/MS By matching 4.33 0.471 2 1 2 1 5627700 5603900 23737 3963 1054 4102 9199;9200;9201 7566;7567 7566 2 412630 50577 EVDRPGSK TAFLGYKAGMTHIVREVDRPGSKVNKKEVV GMTHIVREVDRPGSKVNKKEVVEAVTIVET R E V S K V 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 8 1 886.45084 P39023 P39023 59 66 RPL3 60S ribosomal protein L3 yes yes 2 0.052202 110.12 By MS/MS By matching 7 0 2 1 1 1420200 1412800 7379 3964 854 4103 9202;9203 7568 7568 1 22179 13289 EVDVFSPLR ISPQLLLATQRFLSREVDVFSPLRISEKVL QRFLSREVDVFSPLRISEKVLLHLLKHPSV R E V L R I 0 1 0 1 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 9 0 1060.5553 Q8NE01 Q8NE01 507 515 CNNM3 Metal transporter CNNM3 yes yes 2 0.0012196 131.22 By MS/MS 5 0 1 1 396880 396880 0 3965 1958 4104 9204 7569 7569 1 3980.5 0 EVEDCVPVFLK RDKLYWTHGYVLISKEVEDCVPVFLKHIAH LISKEVEDCVPVFLKHIAHDIYVCGKTINL K E V L K H 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 0 0 0 0 3 0 0 11 0 1333.6588 Q96RT7 Q96RT7 579 589 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 0.00011739 150.36 By MS/MS 2 0 1 1 272340 272340 0 3966 2226 4105 9205 7570 7570 1 92115 0 EVEEDEYKAFYK ELMNDIKPIWQRPSKEVEEDEYKAFYKSFS PSKEVEEDEYKAFYKSFSKESDDPMAYIHF K E V Y K S 1 0 0 1 0 0 4 0 0 0 0 2 0 1 0 0 0 0 2 1 0 0 12 1 1548.6984 P14625 P14625 349 360 HSP90B1 Endoplasmin yes yes 2 8.5948E-18 266.03 By MS/MS 4 0 1 1 1891900 1891900 0 3967 615 4106 9206 7571 7571 1 178040 0 EVEETDEMDQVELVDFDPNQER PDKLSLLEKLLPERKEVEETDEMDQVELVD MDQVELVDFDPNQERRRHYNGEAYEDDEHH K E V E R R 0 1 1 4 0 2 6 0 0 0 1 0 1 1 1 0 1 0 0 3 0 0 22 0 2665.1337 P31689 P31689 351 372 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 7.061E-19 250.46 By MS/MS 6 0 1 1 1394700 1394700 0 3968 787 4107 9207 7572 7572 1 9587.6 0 EVELPLTNFR RLALTLKVTGLGTTREVELPLTNFRSTIFY LGTTREVELPLTNFRSTIFYYVQKLLQLSC R E V F R S 0 1 1 0 0 0 2 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 10 0 1216.6452 Q9ULT8 Q9ULT8 1831 1840 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 2.497E-05 143.37 By MS/MS 2 1 1 1 2 278080 278080 0 3969 2774 4108 9208;9209 7573;7574 7573 2 47510 0 EVEQFTQVAK CQQREGQNYQQNCIKEVEQFTQVAKAYQDR QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA K E V A K A 1 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1177.5979 O96000 O96000 122 131 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 2.1404E-10 205.59 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 10727000 10669000 58017 3970 436 4109 9210;9211;9212 7575;7576;7577 7576 2 216050 132300 EVESFQQLLNAR MMLGVLMERAADDSKEVESFQQLLNARTQE DSKEVESFQQLLNARTQEFIEELLSPPFGG K E V A R T 1 1 1 0 0 2 2 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1432.731 Q8N1B4 Q8N1B4 585 596 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 6.2665E-06 183.72 By MS/MS 4 0 1 1 273930 273930 0 3971 1902 4110 9213 7578 7578 1 25779 0 EVEYDELSAALK FDALIKDVFPGIELKEVEYDELSAALKQVF ELKEVEYDELSAALKQVFEEANYEIIPNQI K E V L K Q 2 0 0 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1365.6664 Q8NCM8 Q8NCM8 1933 1944 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00024221 147.73 By MS/MS 1.5 0.5 1 1 2 302470 302470 0 3972 1952 4111 9214;9215 7579 7579 1 83002 0 EVEYIALSR LRRSIAMQYLELTKREVEYIALSRDTTETD LELTKREVEYIALSRDTTETDLKQRREIRA R E V S R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1078.5659 A3KMH1 A3KMH1 130 138 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0092734 101.72 By MS/MS 3 0.816 1 1 1 3 1053400 1053400 0 3973 14 4112 9216;9217;9218 7580 7580 1 191980 0 EVFAEAVR VRYLECSALQQDGVKEVFAEAVRAVLNPTP LQQDGVKEVFAEAVRAVLNPTPIKRGRSCI K E V V R A 2 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 919.47633 P84095 P84095 167 174 RHOG Rho-related GTP-binding protein RhoG yes yes 2 0.006339 119.29 By MS/MS 9 0 1 1 826020 826020 0 3974 1246 4113 9219 7581 7581 1 16256 0 EVFEMATR FGYMECSAKTKDGVREVFEMATRAALQARR KTKDGVREVFEMATRAALQARRGKKKSGCL R E V T R A 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 8 0 981.45897 P61586;P08134 P61586 169 176 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.0038052 131.03 By MS/MS 9 0 2 2 3437900 3437900 0 3975 1125;518 4114;4115 9220;9221 7582;7583 7583 220 2 67659 0 EVFETATR YDYLECSAKTKEGVREVFETATRAALQKRY KTKEGVREVFETATRAALQKRYGSQNGCIN R E V T R A 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 8 0 951.46616 P62745 P62745 169 176 RHOB Rho-related GTP-binding protein RhoB yes yes 2 0.044696 84.498 By MS/MS 9 0 1 1 272500 272500 0 3976 1167 4116 9222 7584 7584 1 5362.9 0 EVFLGTLNDR AVLQRMMDASVYLQREVFLGTLNDRTNAID VYLQREVFLGTLNDRTNAIDFLMDRNNVVP R E V D R T 0 1 1 1 0 0 1 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1162.5982 Q9NYU1 Q9NYU1 656 665 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 0.003735 108.43 By MS/MS 3 0 1 1 220950 220950 0 3977 2637 4117 9223 7585 7585 1 4042.8 0 EVFNCMLR EMLQRFKDSTIKREREVFNCMLRNLFEEYR STIKREREVFNCMLRNLFEEYRFFPQYPDK R E V L R N 0 1 1 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 8 0 1067.4892 A5YKK6 A5YKK6 886 893 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.018199 101.64 By MS/MS 2.5 0.5 1 1 2 362450 362450 0 3978 19 4118 9224;9225 7586 7586 1 106420 0 EVFSMAGVVVR FVANLDYKVGWKKLKEVFSMAGVVVRADIL KKLKEVFSMAGVVVRADILEDKDGKSRGIG K E V V R A 1 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 4 0 0 11 0 1192.6274 P52272 P52272 222 232 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 2.4915E-05 159.28 By MS/MS 5 0 1 1 398650 398650 0 3979 1012 4119 9226 7587 7587 1 3998.3 0 EVFTSSSSSSSR HLSSQQASGQSYSSREVFTSSSSSSSRQTR SSREVFTSSSSSSSRQTRPILKEQSSSSFS R E V S R Q 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 7 1 0 0 1 0 0 12 0 1259.563 CON__P08779;P08779 CON__P08779 442 453 KRT16 Keratin, type I cytoskeletal 16 yes no 2 2.8167E-13 211.64 By MS/MS By MS/MS 5.44 2.81 1 2 2 2 1 2 2 1 1 2 6 10 31950000 5127300 26823000 + 3980 47 4120 9227;9228;9229;9230;9231;9232;9233;9234;9235;9236;9237;9238;9239;9240;9241;9242 7588;7589;7590;7591;7592;7593;7594;7595;7596;7597;7598;7599;7600 7590 13 276950 33905000 EVGAFGTPVINLGTR AHAGCMIGNSSCGVREVGAFGTPVINLGTR EVGAFGTPVINLGTRQIGRETGENVLHVRD R E V T R Q 1 1 1 0 0 0 1 3 0 1 1 0 0 1 1 0 2 0 0 2 0 0 15 0 1529.8202 Q9Y223 Q9Y223 307 321 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 2.9332E-07 215.72 By MS/MS 5 0 1 1 3619600 3619600 0 3981 2808 4121 9243 7601 7601 1 36303 0 EVGDGTTSVVIIAAELLK PAAKVLCELADLQDKEVGDGTTSVVIIAAE DGTTSVVIIAAELLKNADELVKQKIHPTSV K E V L K N 2 0 0 1 0 0 2 2 0 2 2 1 0 0 0 1 2 0 0 3 0 0 18 0 1814.0037 P17987 P17987 85 102 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.0089912 86.497 By MS/MS 6 0 1 1 41175 41175 0 3982 648 4122 9244 7602 7602 1 283.05 0 EVGDVIALSDITSSGAADR DYVSPLQLNGLGTPKEVGDVIALSDITSSG VIALSDITSSGAADRSQEPSPVGSRRGHVT K E V D R S 3 1 0 3 0 0 1 2 0 2 1 0 0 0 0 3 1 0 0 2 0 0 19 0 1874.9222 Q96CP6 Q96CP6 244 262 GRAMD1A GRAM domain-containing protein 1A yes yes 2 6.7716E-05 217.19 By MS/MS 3.33 1.7 1 1 1 3 1942400 1942400 0 3983 2123 4123 9245;9246;9247 7603;7604 7603 2 168440 0 EVGEAFTILSDPK GASAEVQKEEEKKFKEVGEAFTILSDPKKK FKEVGEAFTILSDPKKKTRYDSGQDLDEEG K E V P K K 1 0 0 1 0 0 2 1 0 1 1 1 0 1 1 1 1 0 0 1 0 0 13 0 1404.7137 Q99615 Q99615 430 442 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.0001124 172.21 By MS/MS 7.33 1.25 1 1 1 3 10553000 10553000 0 3984 2253 4124 9248;9249;9250 7605;7606;7607;7608 7605 4 77678 0 EVIDSIIKEK IKLTPTAEKRVQKSREVIDSIIKEKTVVYG VQKSREVIDSIIKEKTVVYGITTGFGKFAR R E V E K T 0 0 0 1 0 0 2 0 0 3 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1172.6653 P42357 P42357 151 160 HAL Histidine ammonia-lyase yes yes 2 1.1095E-07 196.79 By MS/MS 3 0 1 1 354340 0 354340 3985 881 4125 9251 7609 7609 1 0 45102 EVIELPLTNPELFQR YSEIGGLSEQIRELREVIELPLTNPELFQR EVIELPLTNPELFQRVGIIPPKGCLLYGPP R E V Q R V 0 1 1 0 0 1 3 0 0 1 3 0 0 1 2 0 1 0 0 1 0 0 15 0 1796.9672 P62333 P62333 147 161 PSMC6 26S protease regulatory subunit 10B yes yes 2 8.62E-09 225.55 By MS/MS 7 0.816 1 1 1 3 534530 534530 0 3986 1159 4126 9252;9253;9254 7610;7611;7612 7610 3 7382.5 0 EVIKTNNVSEHEDTDKYR VSSRNVEELVIVLKKEVIKTNNVSEHEDTD KTNNVSEHEDTDKYRQLLVRTLHSCSVRFP K E V Y R Q 0 1 2 2 0 0 3 0 1 1 0 2 0 0 0 1 2 0 1 2 0 0 18 2 2176.0396 P53618 P53618 363 380 COPB1 Coatomer subunit beta yes yes 3;4 0.0031018 99.392 By MS/MS 4.5 0.5 2 2 4 10385000 10385000 0 3987 1033 4127 9255;9256;9257;9258 7613;7614;7615 7614 3 727880 0 EVILDSSEEDFIR FYCRLYYAGEFHKMREVILDSSEEDFIRSL MREVILDSSEEDFIRSLSHSSPWQARGGKS R E V I R S 0 1 0 2 0 0 3 0 0 2 1 0 0 1 0 2 0 0 0 1 0 0 13 0 1550.7464 Q9Y2I7 Q9Y2I7 1835 1847 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 2 0.00056837 133.91 By MS/MS 2 0 1 1 108760 108760 0 3988 2830 4128 9259 7616 7616 1 36786 0 EVIPVNVPEAQEEMK VIDPVAPRYVALLKKEVIPVNVPEAQEEMK EVIPVNVPEAQEEMKEVAKHPKNPEVGLKP K E V M K E 1 0 1 0 0 1 4 0 0 1 0 1 1 0 2 0 0 0 0 3 0 0 15 0 1710.8498 P07814 P07814 514 528 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00051709 151.7 By MS/MS 3 0 2 2 1048000 1048000 0 3989 512 4129;4130 9260;9261 7617;7618 7618 216 2 19176 0 EVISHIGK RRSPRPKGDFSSRAREVISHIGKLRDFLLE DFSSRAREVISHIGKLRDFLLEHRKDYINA R E V G K L 0 0 0 0 0 0 1 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 8 0 881.49707 Q9P2W9 Q9P2W9 55 62 STX18 Syntaxin-18 yes yes 2 0.012395 108.09 By MS/MS 7 0 1 1 1175000 1175000 0 3990 2691 4131 9262 7619 7619 1 18445 0 EVITAQDTVIK KESVNKAQEEVTKQKEVITAQDTVIKAKYA TKQKEVITAQDTVIKAKYAEVAKHKEQNND K E V I K A 1 0 0 1 0 1 1 0 0 2 0 1 0 0 0 0 2 0 0 2 0 0 11 0 1215.6711 O95347 O95347 880 890 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 3.7161E-09 210.08 By MS/MS 3 0 1 1 2037000 2037000 0 3991 405 4132 9263 7620 7620 1 37272 0 EVIVEESIR QQPMNARVKSKREKREVIVEESIRTCKPAF SKREKREVIVEESIRTCKPAFLSEEKLYQE R E V I R T 0 1 0 0 0 0 3 0 0 2 0 0 0 0 0 1 0 0 0 2 0 0 9 0 1072.5764 Q9UPN3 Q9UPN3 2984 2992 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 0.0079434 104.06 By MS/MS 10 0 1 1 229220 229220 0 3992 2798 4133 9264 7621 7621 1 12354 0 EVLADFQR CKQGLPAFRQSQPSREVLADFQRREPYKFL RQSQPSREVLADFQRREPYKFLQFAYFKAN R E V Q R R 1 1 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 976.49779 O75718 O75718 137 144 CRTAP Cartilage-associated protein yes yes 2 0.02311 96.19 By MS/MS 7 0 1 1 604850 604850 0 3993 343 4134 9265 7622 7622 1 9495.1 0 EVLAELEALER IRSYLTEQVNQDLPKEVLAELEALERRVHK DLPKEVLAELEALERRVHKM__________ K E V E R R 2 1 0 0 0 0 4 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1270.6769 Q16822 Q16822 625 635 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 5.4532E-13 227.88 By MS/MS 5.5 0.5 1 1 2 750410 750410 0 3994 1560 4135 9266;9267 7623 7623 1 6846 0 EVLDSFLDLAR ASVGAAGSAENAPSKEVLDSFLDLARNIFP APSKEVLDSFLDLARNIFPSNLVSAAFRSY K E V A R N 1 1 0 2 0 0 1 0 0 0 3 0 0 1 0 1 0 0 0 1 0 0 11 0 1276.6663 Q15758 Q15758 179 189 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 2.3233E-18 250.06 By MS/MS 4.12 1.9 1 1 1 1 2 1 1 8 12038000 12038000 0 3995 1530 4136 9268;9269;9270;9271;9272;9273;9274;9275 7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635 7633 12 233170 0 EVLEKLIEK PGASDLTGSFRLYRKEVLEKLIEKCVSKGY FRLYRKEVLEKLIEKCVSKGYVFQMEMIVR K E V E K C 0 0 0 0 0 0 3 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 9 1 1099.6489 O60762 O60762 193 201 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0053834 124.92 By MS/MS 8 0 1 1 4099000 4099000 0 3996 275 4137 9276 7636 7636 1 51750 0 EVLEKQPVLSQTEAR LATGYGAYLAQPLLREVLEKQPVLSQTEAR EVLEKQPVLSQTEARDLVERCMRVLYYRDA R E V A R D 1 1 0 0 0 2 3 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 15 1 1725.9261 P28070 P28070 197 211 PSMB4 Proteasome subunit beta type-4 yes yes 2;3 3.3088E-10 231.74 By MS/MS By matching 8.67 0.745 3 2 1 5 1 5363700 5316600 47118 3997 749 4138 9277;9278;9279;9280;9281;9282 7637;7638;7639;7640;7641;7642 7637 6 74330 63584 EVLELDSIR NKQDLPGALSSNAIREVLELDSIRSHHWCI SSNAIREVLELDSIRSHHWCIQGCSAVTGE R E V I R S 0 1 0 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1072.5764 P36404 P36404 140 148 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.0010987 132.76 By MS/MS 9 0 1 1 1730700 1730700 0 3998 832 4139 9283 7643 7643 1 34060 0 EVLHALKEK LSQCKFDLLEELVAKEVLHALKEKVTSLPD EELVAKEVLHALKEKVTSLPDNHKNALAAN K E V E K V 1 0 0 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 9 1 1065.6182 Q8WWC4 Q8WWC4 174 182 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.0027202 145.16 By MS/MS 9 0 1 1 441910 441910 0 3999 2034 4140 9284 7644 7644 1 8696.9 0 EVLLASQK MMITNAERLRRKRAREVLLASQKTDAEATD LRRKRAREVLLASQKTDAEATDTEATET__ R E V Q K T 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 886.51238 Q9Y3D3 Q9Y3D3 117 124 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.018237 101.6 By MS/MS By matching 10 0 2 1 1 6886400 6796700 89684 4000 2871 4141 9285;9286 7645 7645 1 366320 114820 EVLLASQKTDAEATDTEATET MMITNAERLRRKRAREVLLASQKTDAEATD QKTDAEATDTEATET_______________ R E V E T - 4 0 0 2 0 1 4 0 0 0 2 1 0 0 0 1 5 0 0 1 0 0 21 1 2222.0438 Q9Y3D3 Q9Y3D3 117 137 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 1.937E-60 360.25 By MS/MS 10 0 1 1 4719300 4719300 0 4001 2871 4142 9287 7646 7646 1 254360 0 EVLLEAQDMAVR AQLEFNDKKGAKIIKEVLLEAQDMAVRDHN IIKEVLLEAQDMAVRDHNVEFRSNLYIAES K E V V R D 2 1 0 1 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 2 0 0 12 0 1372.7021 Q9NWU5 Q9NWU5 113 124 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 7.6143E-25 276 By MS/MS 9 0 2 2 2206200 2206200 0 4002 2614 4143;4144 9288;9289 7647;7648 7648 1122 2 43417 0 EVLNEEDEVQPNGK YAKNKFKNKRLLGTREVLNEEDEVQPNGKI REVLNEEDEVQPNGKIFKKVILGQYNWLSY R E V G K I 0 0 2 1 0 1 4 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 14 0 1598.7424 O95573 O95573 109 122 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 9.7196E-24 273.44 By MS/MS 5 0 1 1 901950 901950 0 4003 417 4145 9290 7649 7649 1 9046.1 0 EVLPHVPLGVIQR PSPDVQLATLAQRVKEVLPHVPLGVIQRDL VKEVLPHVPLGVIQRDLAKTGCVDLTITNL K E V Q R D 0 1 0 0 0 1 1 1 1 1 2 0 0 0 2 0 0 0 0 3 0 0 13 0 1455.8562 Q9Y679 Q9Y679 306 318 AUP1 Ancient ubiquitous protein 1 yes yes 3 0.025984 79.036 By MS/MS 7 0 1 1 595540 595540 0 4004 2934 4146 9291 7650 7650 1 9348.9 0 EVLPVDITTAK EPEETVEVPVLKKRREVLPVDITTAKDACV KKRREVLPVDITTAKDACVNNSALGGEVYR R E V A K D 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 2 0 0 2 0 0 11 0 1184.6653 Q96EA4 Q96EA4 454 464 SPDL1 Protein Spindly yes yes 2 0.051316 69.276 By MS/MS 5 0 1 1 839770 839770 0 4005 2142 4147 9292 7651 7651 1 8422.4 0 EVLQLQEEVK RKAEEVQAWAQRKEREVLQLQEEVKNFITR QRKEREVLQLQEEVKNFITRENLEARVEAA R E V V K N 0 0 0 0 0 2 3 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 10 0 1213.6554 Q9BYN8 Q9BYN8 156 165 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 2.8907E-20 246.93 By MS/MS 8.5 0.5 1 1 2 3374200 3374200 0 4006 2374 4148 9293;9294 7652;7653 7653 2 52519 0 EVLSLLQEK AARDSIVREVIQNSKEVLSLLQEKNPAFKP VIQNSKEVLSLLQEKNPAFKPVLAIIQAGD K E V E K N 0 0 0 0 0 1 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 9 0 1057.6019 Q6UB35 Q6UB35 84 92 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00062128 150.36 By MS/MS 4 0 1 1 2170500 2170500 0 4007 1728 4149 9295 7654 7654 1 204260 0 EVLTGNDEVIGQVLSTLK IRLPYTASSGLMAPREVLTGNDEVIGQVLS TGNDEVIGQVLSTLKSEDVPYTAALTAVRP R E V L K S 0 0 1 1 0 1 2 2 0 1 3 1 0 0 0 1 2 0 0 3 0 0 18 0 1914.031 Q15904 Q15904 194 211 ATP6AP1 V-type proton ATPase subunit S1 yes yes 2 0.00015529 176.19 By MS/MS 6 0 1 1 182970 182970 0 4008 1539 4150 9296 7655 7655 1 1257.7 0 EVLVLGLDGAGK DEEDEEPALEELEQREVLVLGLDGAGKSTF EQREVLVLGLDGAGKSTFLRVLSGKPPLEG R E V G K S 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1169.6656 Q8N8L6 Q8N8L6 79 90 ARL10 ADP-ribosylation factor-like protein 10 yes yes 2 0.00030869 143.4 By MS/MS 8.5 0.5 1 1 2 550060 550060 0 4009 1932 4151 9297;9298 7656;7657 7656 2 7687.3 0 EVMLILIR LIPLMDAEYANYYTREVMLILIREFQSPDE YANYYTREVMLILIREFQSPDEEMKKIVLK R E V I R E 0 1 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 0 0 1 0 0 8 0 985.59942 O75533 O75533 768 775 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0028731 135.35 By MS/MS 3 0 1 1 90799 90799 0 4010 332 4152 9299 7658 7658 1 1661.4 0 EVMLVGIGDK KQMKSEVATLTAAGKEVMLVGIGDKIRGIL TAAGKEVMLVGIGDKIRGILYRTHSDQFLV K E V D K I 0 0 0 1 0 0 1 2 0 1 1 1 1 0 0 0 0 0 0 2 0 0 10 0 1059.5634 P36542 P36542 127 136 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.0022497 111.61 By MS/MS 8.5 0.5 1 1 2 2850000 2850000 0 4011 835 4153 9300;9301 7659 7659 421 1 36640 0 EVMLVGIGDKIR KQMKSEVATLTAAGKEVMLVGIGDKIRGIL AGKEVMLVGIGDKIRGILYRTHSDQFLVAF K E V I R G 0 1 0 1 0 0 1 2 0 2 1 1 1 0 0 0 0 0 0 2 0 0 12 1 1328.7486 P36542 P36542 127 138 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2;3 2.5568E-05 187.16 By MS/MS 8 0.632 1 3 1 5 17130000 17130000 0 4012 835 4154;4155 9302;9303;9304;9305;9306 7660;7661;7662 7662 421 3 218130 0 EVMPLLLAYLK QFSENLQPHISSYSREVMPLLLAYLKSVPL SYSREVMPLLLAYLKSVPLGHTHHLAKACY R E V L K S 1 0 0 0 0 0 1 0 0 0 4 1 1 0 1 0 0 0 1 1 0 0 11 0 1288.7465 Q8TEX9 Q8TEX9 435 445 IPO4 Importin-4 yes yes 2 0.04864 69.825 By MS/MS 5 0 1 1 27131 27131 0 4013 2005 4156 9307 7663 7663 971 1 272.11 0 EVNIVLPTQSIVPR GITKENCILNLLTEKEVNIVLPTQSIVPRT KEVNIVLPTQSIVPRTFVLKPGMVLFLGAI K E V P R T 0 1 1 0 0 1 1 0 0 2 1 0 0 0 2 1 1 0 0 3 0 0 14 0 1563.8984 Q8NC60 Q8NC60 514 527 NOA1 Nitric oxide-associated protein 1 yes yes 2 2.8904E-05 194.39 By MS/MS 5 0 1 1 414080 414080 0 4014 1949 4157 9308 7664 7664 1 4153 0 EVNTVLADVIK AEVWVEYTCKHFTKREVNTVLADVIKHMTP FTKREVNTVLADVIKHMTPDRAFEDSYPQL R E V I K H 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 3 0 0 11 0 1199.6762 Q7Z3J2 Q7Z3J2 521 531 C16orf62 UPF0505 protein C16orf62 yes yes 2 4.2777E-06 178.54 By MS/MS 4 0 1 1 664120 664120 0 4015 1784 4158 9309 7665 7665 1 62498 0 EVPCYVFDEELR RTTAACKKDIFKANKEVPCYVFDEELRKHD ANKEVPCYVFDEELRKHDLNPLIKLSGAYL K E V L R K 0 1 0 1 1 0 3 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 12 0 1554.7024 P11717 P11717 171 182 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.052009 68.355 By MS/MS 1.5 0.5 1 1 2 138880 138880 0 4016 583 4159 9310;9311 7666 7666 1 40662 0 EVPEHITEEELK AATREFIEMWRLLGREVPEHITEEELKTLM LGREVPEHITEEELKTLMECVSNTAKKKYL R E V L K T 0 0 0 0 0 0 5 0 1 1 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1451.7144 Q7L0Y3 Q7L0Y3 107 118 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0012466 121.6 By MS/MS 7 0 1 1 2601000 2601000 0 4017 1759 4160 9312 7667 7667 1 40831 0 EVPNYKLITPAVVSER NLVLFDKATYDKLCKEVPNYKLITPAVVSE VPNYKLITPAVVSERLKIRGSLARAALQEL K E V E R L 1 1 1 0 0 0 2 0 0 1 1 1 0 0 2 1 1 0 1 3 0 0 16 1 1813.9938 P62851 P62851 61 76 RPS25 40S ribosomal protein S25 yes yes 3 0.00063991 119.62 By MS/MS 9.5 0.5 1 1 2 1520900 1520900 0 4018 1176 4161 9313;9314 7668;7669 7668 2 38599 0 EVPQDQHLEAPADQSK SVRPQTALEENETQKEVPQDQHLEAPADQS VPQDQHLEAPADQSKGLLPP__________ K E V S K G 2 0 0 2 0 3 2 0 1 0 1 1 0 0 2 1 0 0 0 1 0 0 16 0 1790.8435 Q9Y3D9 Q9Y3D9 170 185 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 8.6534E-24 263.89 By MS/MS 9 0 2 2 6544800 6544800 0 4019 2875 4162 9315;9316 7670;7671 7671 2 128800 0 EVQDGIAPR PVPESGDGERVPEQKEVQDGIAPRMFKALI RVPEQKEVQDGIAPRMFKALIGKGHPEFST K E V P R M 1 1 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 983.50361 P45974 P45974 407 415 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.013996 93.429 By MS/MS 4 0 1 1 437980 437980 0 4020 906 4163 9317 7672 7672 1 41217 0 EVQDLFEAQGNDR RRAATECMCNLAMSKEVQDLFEAQGNDRLK SKEVQDLFEAQGNDRLKLLVLYSGEDDELL K E V D R L 1 1 1 2 0 2 2 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 13 0 1519.6903 Q9H3U1 Q9H3U1 807 819 UNC45A Protein unc-45 homolog A yes yes 2 3.7396E-08 221.09 By MS/MS 4 0 1 1 3670700 3670700 0 4021 2442 4164 9318 7673 7673 1 345430 0 EVQDLFEAQGNDRLK RRAATECMCNLAMSKEVQDLFEAQGNDRLK EVQDLFEAQGNDRLKLLVLYSGEDDELLQR K E V L K L 1 1 1 2 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 15 1 1760.8693 Q9H3U1 Q9H3U1 807 821 UNC45A Protein unc-45 homolog A yes yes 3 0.022558 73.386 By MS/MS 4 0 1 1 1368900 1368900 0 4022 2442 4165 9319 7674 7674 1 128820 0 EVQDLTVR LAERALRVKAVKLEKEVQDLTVRYQRAIAD KAVKLEKEVQDLTVRYQRAIADCENIRRRT K E V V R Y 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 958.50836 Q8TAA5 Q8TAA5 72 79 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.0066583 118.74 By MS/MS By matching 5.88 2.85 1 1 1 1 1 1 2 1 7 1304300 391470 912790 4023 1973 4166 9320;9321;9322;9323;9324;9325;9326;9327 7675 7675 1 7704.3 1155600 EVQLEELEAAR QCEEVARALGKESLREVQLEELEAARDLVS ESLREVQLEELEAARDLVSKEGFRRARHVV R E V A R D 2 1 0 0 0 1 4 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1285.6514 P51570 P51570 257 267 GALK1 Galactokinase yes yes 2 2.0888E-18 252.16 By MS/MS 7 0 1 1 2566900 2566900 0 4024 997 4167 9328 7676 7676 1 40296 0 EVQPDVVVVELCQYR HFSDDSKRDVVKTIREVQPDVVVVELCQYR EVQPDVVVVELCQYRVSMLKMDESTLLREA R E V Y R V 0 1 0 1 1 2 2 0 0 0 1 0 0 0 1 0 0 0 1 5 0 0 15 0 1831.9138 Q9H4I3 Q9H4I3 97 111 TRABD TraB domain-containing protein yes yes 2 2.2679E-07 218.02 By MS/MS 7 0 1 1 171030 171030 0 4025 2447 4168 9329 7677 7677 1 2684.9 0 EVQTNDLK QVRQIRKKMMEIMTREVQTNDLKEVVNKLI MMEIMTREVQTNDLKEVVNKLIPDSIGKDI R E V L K E 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 945.47673 P61247 P61247 175 182 RPS3A 40S ribosomal protein S3a yes yes 2 0.0027177 136.27 By MS/MS By matching 8.33 0.471 2 1 2 1 10699000 10638000 60981 4026 1118 4169 9330;9331;9332 7678;7679 7678 2 141270 82290 EVQTNDLKEVVNK QVRQIRKKMMEIMTREVQTNDLKEVVNKLI TREVQTNDLKEVVNKLIPDSIGKDIEKACQ R E V N K L 0 0 2 1 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 3 0 0 13 1 1514.794 P61247 P61247 175 187 RPS3A 40S ribosomal protein S3a yes yes 2 1.1396E-10 227.36 By MS/MS 8 0.816 1 1 1 3 14394000 14394000 0 4027 1118 4170 9333;9334;9335 7680;7681 7680 2 184150 0 EVSFDVELPK NVVTTRAVNHANTAKEVSFDVELPKTAFIT ANTAKEVSFDVELPKTAFITNFTLTIDGVT K E V P K T 0 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 10 0 1161.5918 CON__Q0V8M9;Q06033 CON__Q0V8M9 76 85 ITIH3 Inter-alpha-trypsin inhibitor heavy chain H3 yes no 2 0.0014201 115.49 By MS/MS 10 0 1 1 113320 113320 0 + 4028 58 4171 9336 7682 7682 1 6107.6 0 EVSFQSTGESEWK VGQEDEAESDIFSIREVSFQSTGESEWKDT IREVSFQSTGESEWKDTNYTLNTDSLDWAL R E V W K D 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 3 1 1 0 1 0 0 13 0 1512.6733 Q07021 Q07021 208 220 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2 9.3641E-05 174.23 By MS/MS 8 0 1 1 2066500 2066500 0 4029 1299 4172 9337 7683 7683 1 26089 0 EVTAAQVAR SIEECRNIIVQFGVREVTAAQVARVLGMMA VQFGVREVTAAQVARVLGMMARTHSGLTDG R E V A R V 3 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 9 0 943.50869 A5YKK6 A5YKK6 284 292 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0087608 107.29 By MS/MS 2 0.816 1 1 1 3 1709100 1709100 0 4030 19 4173 9338;9339;9340 7684 7684 1 421540 0 EVTEVLQEATCK QVHAESLQQVVQSQREVTEVLQEATCKIAA SQREVTEVLQEATCKIAAQQSETARLTTDA R E V C K I 1 0 0 0 1 1 3 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 12 0 1405.6759 Q5VT06 Q5VT06 1422 1433 CEP350 Centrosome-associated protein 350 yes yes 2 7.3428E-09 261.35 By MS/MS 2 0.816 1 1 1 3 550630 550630 0 4031 1647 4174 9341;9342;9343 7685 7685 1 133320 0 EVTFVPGLYK QQMWVYDEDVGINYREVTFVPGLYKIFDEI GINYREVTFVPGLYKIFDEILVNAADNKQR R E V Y K I 0 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 1 0 1 2 0 0 10 0 1151.6227 Q02880;P11388 P11388 74 83 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2-alpha no no 2 0.005008 105.57 By MS/MS 2.5 0.5 1 1 2 563030 563030 0 4032 578;1282 4175 9344;9345 7686;7687 7686 2 95305 0 EVVATLLPSAK LQVSEQSQRKALGRKEVVATLLPSAKEQQK LGRKEVVATLLPSAKEQQKEEEEKRLKEHL K E V A K E 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 11 0 1126.6598 Q9UJG1 Q9UJG1 112 122 MOSPD1 Motile sperm domain-containing protein 1 yes yes 2 0.0012037 117.53 By MS/MS 9 0 1 1 482560 482560 0 4033 2746 4176 9346 7688 7688 1 9496.9 0 EVVDPTKCNLLAEK VSVEFAVAATDCIAKEVVDPTKCNLLAEKQ KEVVDPTKCNLLAEKQYGFCKGSVIQKALG K E V E K Q 1 0 1 1 1 0 2 0 0 0 2 2 0 0 1 0 1 0 0 2 0 0 14 1 1614.8287 CON__P12763 CON__P12763 212 225 yes yes 2 0.00023332 155.88 By MS/MS 6 0.816 1 1 1 3 4806000 4806000 0 + 4034 49 4177 9347;9348;9349 7689 7689 1 39829 0 EVVEAHVDQK TAEAIKALGAKHCVKEVVEAHVDQKNKVVT KHCVKEVVEAHVDQKNKVVTTPAFMCETAL K E V Q K N 1 0 0 1 0 1 2 0 1 0 0 1 0 0 0 0 0 0 0 3 0 0 10 0 1152.5775 P0DPI2;A0A0B4J2D5 P0DPI2 224 233 yes no 2 0.0011359 120.99 By MS/MS 8.5 0.5 1 1 2 1415800 1415800 0 4035 4 4178 9350;9351 7690 7690 1 20145 0 EVVFVEDVK PKEEEKVNEEQWSLREVVFVEDVKNVPVGK EQWSLREVVFVEDVKNVPVGKVLKVDGAYV R E V V K N 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 4 0 0 9 0 1062.5597 O95071 O95071 655 663 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.010744 99.139 By MS/MS 2.5 1.12 1 1 1 1 4 1525500 1525500 0 4036 384 4179 9352;9353;9354;9355 7691;7692 7691 2 251470 0 EVVFVEDVKNVPVGK PKEEEKVNEEQWSLREVVFVEDVKNVPVGK EVVFVEDVKNVPVGKVLKVDGAYVAVKFPG R E V G K V 0 0 1 1 0 0 2 1 0 0 0 2 0 1 1 0 0 0 0 6 0 0 15 1 1656.9087 O95071 O95071 655 669 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0035135 128.88 By MS/MS 1.5 0.5 1 1 2 266710 266710 0 4037 384 4180 9356;9357 7693 7693 1 78405 0 EVVHTVSLHEIDVINSR TKFVQCPDGELQKRKEVVHTVSLHEIDVIN VHTVSLHEIDVINSRTQGFLALFSGDTGEI K E V S R T 0 1 1 1 0 0 2 0 2 2 1 0 0 0 0 2 1 0 0 4 0 0 17 0 1946.0221 Q9Y230 Q9Y230 237 253 RUVBL2 RuvB-like 2 yes yes 2;3 0.00020717 203.29 By MS/MS 6.75 0.829 2 1 1 4 28448000 28448000 0 4038 2810 4181 9358;9359;9360;9361 7694;7695 7695 2 206680 0 EVVIVSATR IRYVERSYVSKPTLKEVVIVSATRTPIGSF SKPTLKEVVIVSATRTPIGSFLGSLSLLPA K E V T R T 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 9 0 972.5604 P24752 P24752 41 49 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.00022775 155.07 By MS/MS By matching 7 0 2 1 1 28373000 28326000 46557 4039 716 4182 9362;9363 7696 7696 1 444670 83847 EVVNKDVLDVYIEHR FADAVQELLPQYKEREVVNKDVLDVYIEHR EVVNKDVLDVYIEHRLMMEQRSRDPGMVRS R E V H R L 0 1 1 2 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 4 0 0 15 1 1826.9527 P33993 P33993 92 106 MCM7 DNA replication licensing factor MCM7 yes yes 3 3.1369E-11 236.05 By MS/MS 5 0 1 1 1421800 1421800 0 4040 808 4183 9364 7697 7697 1 14260 0 EVVTEHLINK MVLHKHGEKLYTGLREVVTEHLINKVREDV YTGLREVVTEHLINKVREDVLNSLNNNFLQ R E V N K V 0 0 1 0 0 0 2 0 1 1 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1180.6452 Q13618 Q13618 79 88 CUL3 Cullin-3 yes yes 2 2.1049E-05 167.23 By MS/MS 4.5 0.5 1 1 2 1548100 1548100 0 4041 1404 4184 9365;9366 7698;7699 7698 2 80780 0 EVVTEIRDK HAALQDIGKNIYTIREVVTEIRDKATRRRL NIYTIREVVTEIRDKATRRRLAVLPYELRF R E V D K A 0 1 0 1 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 9 1 1087.5873 Q9ULX3 Q9ULX3 32 40 NOB1 RNA-binding protein NOB1 yes yes 2 0.029017 107.69 By MS/MS 7 0 1 1 2287100 2287100 0 4042 2777 4185 9367 7700 7700 1 35903 0 EVYELLDSPGK EVLNIGKKLYEGKTKEVYELLDSPGKVLLQ GKTKEVYELLDSPGKVLLQSKDQITAGNAA K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 P22234 P22234 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.00018806 148.94 By MS/MS 8.5 1.5 1 1 2 4375100 4375100 0 4043 689 4186 9368;9369 7701;7702 7702 2 76177 0 EVYQQQQYGSGGR TVSGSKCEIKVAQPKEVYQQQQYGSGGRGN PKEVYQQQQYGSGGRGNRNRGNRGSGGGGG K E V G R G 0 1 0 0 0 4 1 3 0 0 0 0 0 0 0 1 0 0 2 1 0 0 13 0 1498.6801 Q99729 Q99729 233 245 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 2 1.7393E-11 255.41 By MS/MS 7 0 1 1 1762800 1762800 0 4044 2263 4187 9370 7703 7703 1 27673 0 EVYVPHPR KCLYALEEGIVRYTKEVYVPHPRNTEAVDL GIVRYTKEVYVPHPRNTEAVDLITRLPKGA K E V P R N 0 1 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 0 1 2 0 0 8 0 995.51886 Q9P0M9 Q9P0M9 102 109 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 0.03848 86.866 By MS/MS 10 0 1 1 249250 249250 0 4045 2666 4188 9371 7704 7704 1 13433 0 EWGSGSDTLR PMTSGVKQKIMSVIREWGSGSDTLRCLALA MSVIREWGSGSDTLRCLALATHDNPLRREE R E W L R C 0 1 0 1 0 0 1 2 0 0 1 0 0 0 0 2 1 1 0 0 0 0 10 0 1106.4993 P16615 P16615 550 559 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.026283 83.783 By MS/MS 2.5 1.12 1 1 1 1 4 4991300 4991300 0 4046 635 4189 9372;9373;9374;9375 7705;7706 7706 2 762990 0 EYEAAVEQLK MQEQTLQLEQQSKLKEYEAAVEQLKSEQIR QSKLKEYEAAVEQLKSEQIRAQAEERRKTL K E Y L K S 2 0 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1178.5819 Q5T9A4 Q5T9A4 95 104 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.00080317 143.7 By MS/MS 4.5 0.5 1 1 2 1357200 1357200 0 4047 1638 4190 9376;9377 7707 7707 1 58400 0 EYEAAVEQLKSEQIR MQEQTLQLEQQSKLKEYEAAVEQLKSEQIR EYEAAVEQLKSEQIRAQAEERRKTLSEETR K E Y I R A 2 1 0 0 0 2 4 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 15 1 1791.9003 Q5T9A4 Q5T9A4 95 109 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 6.1549E-32 293.47 By MS/MS 5 0 1 1 3049500 3049500 0 4048 1638 4191 9378 7708;7709 7708 2 30585 0 EYELFEFR AAKRLAECVKQVITKEYELFEFRRTEVPPL VKQVITKEYELFEFRRTEVPPLLLILDRCD K E Y F R R 0 1 0 0 0 0 3 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 8 0 1131.5237 Q9NRW7 Q9NRW7 198 205 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.001959 143.61 By MS/MS 5 0 1 1 279700 279700 0 4049 2559 4192 9379 7710 7710 1 2805.2 0 EYENELAK ERLRVLLQEEGTRKREYENELAKVRNHYNE EEGTRKREYENELAKVRNHYNEEMSNLRNK R E Y A K V 1 0 1 0 0 0 3 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 0 994.46074 P15924 P15924 1187 1194 DSP Desmoplakin yes yes 2 0.0053896 123.69 By MS/MS By matching 2 0.707 1 2 1 2 2 865090 750810 114280 4050 628 4193 9380;9381;9382;9383 7711 7711 1 187970 143750 EYFSWEGAFQHVGK RKLDPGSEETQTLVREYFSWEGAFQHVGKA REYFSWEGAFQHVGKAFNQGKIFK______ R E Y G K A 1 0 0 0 0 1 2 2 1 0 0 1 0 2 0 1 0 1 1 1 0 0 14 0 1683.7682 P26641 P26641 415 428 EEF1G Elongation factor 1-gamma yes yes 2 0.0024074 110.08 By MS/MS 6 0 1 1 1351000 1351000 0 4051 736 4194 9384 7712 7712 0 9287.2 0 EYGCPCITGKPK MGELHLEIYAQRLEREYGCPCITGKPKVAF LEREYGCPCITGKPKVAFRETITAPVPFDF R E Y P K V 0 0 0 0 2 0 1 2 0 1 0 2 0 0 2 0 1 0 1 0 0 0 12 1 1408.6479 Q96RP9 Q96RP9 511 522 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0071026 117.02 By MS/MS 5 0 1 1 291010 291010 0 4052 2223 4195 9385 7713 7713 1 2918.7 0 EYINECDSDYHEER RQEAVRMVRVLTVLREYINECDSDYHEERT REYINECDSDYHEERTILPMSRAFRGKHLS R E Y E R T 0 1 1 2 1 0 4 0 1 1 0 0 0 0 0 1 0 0 2 0 0 0 14 0 1857.7112 Q93008 Q93008 859 872 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 4.1093E-11 226.04 By MS/MS 2.75 0.829 2 1 1 4 2051100 2051100 0 4053 2085 4196 9386;9387;9388;9389 7714;7715;7716 7715 3 539410 0 EYIPGQPPLSQSSDSSPTR CLLSLKAQYKEKTGKEYIPGQPPLSQSSDS GQPPLSQSSDSSPTRNSEPAGLETPEAKVL K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 P07814 P07814 871 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00076072 110.22 By MS/MS 3.5 0.5 1 1 2 3536100 3536100 0 4054 512 4197 9390;9391 7717 7717 1 146540 0 EYIPTVFDNYSAQSAVDGR KTCLLICYTTNAFPKEYIPTVFDNYSAQSA TVFDNYSAQSAVDGRTVNLNLWDTAGQEEY K E Y G R T 2 1 1 2 0 1 1 1 0 1 0 0 0 1 1 2 1 0 2 2 0 0 19 0 2130.9858 P84095 P84095 31 49 RHOG Rho-related GTP-binding protein RhoG yes yes 2 9.1771E-05 173.19 By MS/MS 9 0 1 1 227870 227870 0 4055 1246 4198 9392 7718;7719 7718 2 4484.5 0 EYIQLHR NKIVDRFLHLLNRPREYIQLHRDTTVQTLT LHLLNRPREYIQLHRDTTVQTLTLQPSVKD R E Y H R D 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 957.50321 A3KMH1 A3KMH1 803 809 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.036184 100.07 By MS/MS 2 0 1 1 271050 271050 0 4056 14 4199 9393 7720 7720 1 91682 0 EYITPAQISK IAQKQLEVVHTLDGKEYITPAQISKEMRDE TLDGKEYITPAQISKEMRDELHVRGGRVNI K E Y S K E 1 0 0 0 0 1 1 0 0 2 0 1 0 0 1 1 1 0 1 0 0 0 10 0 1148.6077 O94874 O94874 55 64 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0045125 106.68 By MS/MS 4 0 1 1 1008600 1008600 0 4057 372 4200 9394 7721 7721 1 94916 0 EYLEFRR YPALMDCMNKLKNNKEYLEFRRERSQMLLS MNKLKNNKEYLEFRRERSQMLLSRRNQLLL K E Y R R E 0 2 0 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 7 1 1011.5138 Q9BPW8 Q9BPW8 147 153 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.049252 123.99 By MS/MS By matching 7.25 0.829 1 1 2 1 3 3493200 3304100 189180 4058 2278 4201 9395;9396;9397;9398 7722 7722 1 41713 264600 EYLLGSTAEEK GLTTIAAHLVKQANKEYLLGSTAEEKAIVQ QANKEYLLGSTAEEKAIVQQWLEYRVTQVD K E Y E K A 1 0 0 0 0 0 3 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 11 0 1238.603 O43324 O43324 58 68 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 5.3668E-13 228.2 By MS/MS 9.5 0.5 1 1 2 3111600 3111600 0 4059 204 4202 9399;9400 7723 7723 1 78479 0 EYLLQYNDPNR RAQAERLAIRAQLKREYLLQYNDPNRRGLI QLKREYLLQYNDPNRRGLIENPALLRWAYA R E Y N R R 0 1 2 1 0 1 1 0 0 0 2 0 0 0 1 0 0 0 2 0 0 0 11 0 1423.6732 O95168 O95168 46 56 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 2.5375E-09 195.36 By MS/MS 10 0 1 1 427200 427200 0 4060 389 4203 9401 7724 7724 1 23025 0 EYLLQYNDPNRR RAQAERLAIRAQLKREYLLQYNDPNRRGLI LKREYLLQYNDPNRRGLIENPALLRWAYAR R E Y R R G 0 2 2 1 0 1 1 0 0 0 2 0 0 0 1 0 0 0 2 0 0 0 12 1 1579.7743 O95168 O95168 46 57 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 0.0050496 116.3 By MS/MS 10 0 1 1 849220 849220 0 4061 389 4204 9402 7725 7725 1 45770 0 EYLQQLR KDLFIWDLDLPSRRREYLQQLRKDVVETTR LDLPSRRREYLQQLRKDVVETTRSPESVSR R E Y L R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 948.50288 Q9P2P6 Q9P2P6 4307 4313 STARD9 StAR-related lipid transfer protein 9 yes yes 2 0.025983 107.74 By MS/MS 9.5 0.5 1 1 2 12815000 12815000 0 4062 2687 4205 9403;9404 7726 7726 1 256390 0 EYLTTLGQR EAVILLQEIGVLDQREYLTTLGQRLAHIST GVLDQREYLTTLGQRLAHISTDPRLAKAIV R E Y Q R L 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 2 0 1 0 0 0 9 0 1079.5611 Q7L2E3 Q7L2E3 865 873 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00042575 148.99 By MS/MS 3.5 0.5 1 1 2 2362400 2362400 0 4063 1761 4206 9405;9406 7727;7728 7727 2 95013 0 EYNEFAEVFLK ARLFERYGSPGNVSKEYNEFAEVFLKAFAV NVSKEYNEFAEVFLKAFAVGVQQVLLKVLY K E Y L K A 1 0 1 0 0 0 3 0 0 0 1 1 0 2 0 0 0 0 1 1 0 0 11 0 1387.666 O95373 O95373 284 294 IPO7 Importin-7 yes yes 2 2.239E-13 239.93 By MS/MS 3.5 0.5 1 1 2 309390 309390 0 4064 406 4207 9407;9408 7729 7729 1 22981 0 EYNIGVLR QFEDKPALSKTEDRKEYNIGVLRHLQVIFG SKTEDRKEYNIGVLRHLQVIFGHLAASRLQ K E Y L R H 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 0 962.51853 Q93008;O00507 Q93008 1638 1645 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0033553 133.12 By MS/MS 2.5 0.5 1 1 2 844410 844410 0 4065 2085 4208 9409;9410 7730 7730 1 229980 0 EYPFILDAFQR EDYLPLKPRVGKAAKEYPFILDAFQREAIQ KAAKEYPFILDAFQREAIQCVDNNQSVLVS K E Y Q R E 1 1 0 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 11 0 1397.698 P42285 P42285 135 145 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.001332 114.97 By MS/MS 4 0 1 1 85602 85602 0 4066 878 4209 9411 7731 7731 1 8055.7 0 EYPSEQIIVTEK CKASNRRPSVYLPTREYPSEQIIVTEKTNI PTREYPSEQIIVTEKTNILLRYLHQQWDKK R E Y E K T 0 0 0 0 0 1 3 0 0 2 0 1 0 0 1 1 1 0 1 1 0 0 12 0 1434.7242 Q9BW61 Q9BW61 40 51 DDA1 DET1- and DDB1-associated protein 1 yes yes 2 0.00068327 155 By MS/MS 10 0 1 1 342570 342570 0 4067 2344 4210 9412 7732 7732 1 18463 0 EYQDAFLFNELK YSLFLDESRSTQYMKEYQDAFLFNELKGET YMKEYQDAFLFNELKGETMDTS________ K E Y L K G 1 0 1 1 0 1 2 0 0 0 2 1 0 2 0 0 0 0 1 0 0 0 12 0 1515.7246 Q9Y230 Q9Y230 445 456 RUVBL2 RuvB-like 2 yes yes 2 4.1574E-06 217.02 By MS/MS 6 0 1 1 758130 758130 0 4068 2810 4211 9413 7733 7733 1 5211.5 0 EYQDAFLFNELKGETMDTS YSLFLDESRSTQYMKEYQDAFLFNELKGET AFLFNELKGETMDTS_______________ K E Y T S - 1 0 1 2 0 1 3 1 0 0 2 1 1 2 0 1 2 0 1 0 0 0 19 1 2236.9834 Q9Y230 Q9Y230 445 463 RUVBL2 RuvB-like 2 yes yes 2 2.8152E-07 220.97 By MS/MS 6 0 1 1 573130 573130 0 4069 2810 4212 9414 7734 7734 1 3939.8 0 EYQEIENLDK EMLSESKNILDELKKEYQEIENLDKTKIKK DELKKEYQEIENLDKTKIKK__________ K E Y D K T 0 0 1 1 0 1 3 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 10 0 1279.5932 L0R819 L0R819 82 91 ASNSD1 yes yes 2 0.042202 84.817 By MS/MS 10 0 1 1 129360 129360 0 4070 79 4213 9415 7735 7735 0 6971.8 0 EYQELMNTK EALQKAKQDMARLLREYQELMNTKLALDVE MARLLREYQELMNTKLALDVEIATYRKLLE R E Y T K L 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1154.5278 CON__P13647;P13647;CON__Q922U2 CON__P13647 452 460 KRT5 Keratin, type II cytoskeletal 5 no no 2 4.1511E-05 172.94 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 1 6 1930700 1169600 761090 + 4071 52;74 4214;4215 9416;9417;9418;9419;9420;9421;9422 7736;7737;7738;7739;7740 7739 39 5 110070 262200 EYQEVMNSK GALQKAKQDMACLIREYQEVMNSKLGLDIE MACLIREYQEVMNSKLGLDIEIATYRRLLE R E Y S K L 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 9 0 1126.4965 CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__Q61726;CON__P78386;A6NCN2;P78386;CON__Q9NSB4;Q9NSB4 CON__O43790 388 396 KRT86;KRT81;KRT83;KRT87P;KRT85;KRT82 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Putative keratin-87 protein;Keratin, type II cuticular Hb5;Keratin, type II cuticular Hb2 yes no 2 8.1765E-05 172.25 By MS/MS 10 0 1 1 47879 0 47879 + 4072 35 4216 9423 7741 7741 13 1 0 61299 EYQISAGDFPEVK ELISRLPEIYIQLQREYQISAGDFPEVKAM QREYQISAGDFPEVKAMQEQLENYDFTKFH R E Y V K A 1 0 0 1 0 1 2 1 0 1 0 1 0 1 1 1 0 0 1 1 0 0 13 0 1481.7038 Q9H223 Q9H223 348 360 EHD4 EH domain-containing protein 4 yes yes 2 2.4569E-05 209.19 By MS/MS 5 0 1 1 1254400 1254400 0 4073 2425 4217 9424 7742 7742 1 12581 0 EYQTQLIQR FNALFVRPHIRGAIREYQTQLIQRVKDDIE IRGAIREYQTQLIQRVKDDIESLHDKFKVQ R E Y Q R V 0 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1177.6091 Q14204 Q14204 603 611 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.4634E-22 250.99 By MS/MS 2.5 1.12 1 1 1 1 4 6336900 6336900 0 4074 1433 4218 9425;9426;9427;9428 7743;7744 7743 2 1413800 0 EYSKEGWEYVK MTVMSALSVAPSKAREYSKEGWEYVKARTK SKAREYSKEGWEYVKARTK___________ R E Y V K A 0 0 0 0 0 0 3 1 0 0 0 2 0 0 0 1 0 1 2 1 0 0 11 1 1416.6561 Q5XKP0 Q5XKP0 104 114 QIL1 Protein QIL1 yes yes 2 1.2721E-09 224.75 By MS/MS 10 0 1 1 1825600 1825600 0 4075 1663 4219 9429 7745 7745 1 98395 0 EYTAAVEAK LILDDVAITELSFSREYTAAVEAKQVAQQE ELSFSREYTAAVEAKQVAQQEAQRAQFLVE R E Y A K Q 3 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 9 0 980.48148 Q99623 Q99623 192 200 PHB2 Prohibitin-2 yes yes 2 0.0034499 111.95 By MS/MS By matching 8.2 1.17 2 1 1 1 3 2 30763000 29924000 838790 4076 2254 4220 9430;9431;9432;9433;9434 7746;7747 7746 2 482360 1317100 EYTDVYPEIIER KIPIKRSDMLKDIIKEYTDVYPEIIERAGY IIKEYTDVYPEIIERAGYSLEKVFGIQLKE K E Y E R A 0 1 0 1 0 0 3 0 0 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1525.73 Q9Y5V3;Q9UNF1 Q9UNF1 312 323 MAGED1;MAGED2 Melanoma-associated antigen D1;Melanoma-associated antigen D2 no no 2 0.00053106 133.89 By MS/MS 4 0 1 1 2342300 2342300 0 4077 2787;2924 4221 9435 7748 7748 1 220430 0 EYTINIHKR EKKKGRSAINEVVTREYTINIHKRIHGVGF NEVVTREYTINIHKRIHGVGFKKRAPRALK R E Y K R I 0 1 1 0 0 0 1 0 1 2 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1172.6302 P62899 P62899 24 32 RPL31 60S ribosomal protein L31 yes yes 2 0.00078716 155 By MS/MS 10 0 1 1 430350 430350 0 4078 1183 4222 9436 7749 7749 1 23194 0 EYVAYSHTGR SGKQRYSYQYTVANKEYVAYSHTGRIIPAI TVANKEYVAYSHTGRIIPAIWFRYDLSPIT K E Y G R I 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 2 1 0 0 10 0 1181.5465 Q969X5 Q969X5 215 224 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 2.0511E-10 206.43 By MS/MS 8 0 1 1 775560 775560 0 4079 2097 4223 9437 7750 7750 1 9791.4 0 FAAATGATPIAGR SVISSRNTGQRAVLKFAAATGATPIAGRFT LKFAAATGATPIAGRFTPGTFTNQIQAAFR K F A G R F 5 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 0 0 0 0 13 0 1202.6408 P08865 P08865 90 102 RPSA 40S ribosomal protein SA yes yes 2 1.5527E-13 242.49 By MS/MS By MS/MS 8 1.49 2 2 1 2 2 5 4 183000000 181900000 1104500 4080 529 4224 9438;9439;9440;9441;9442;9443;9444;9445;9446 7751;7752;7753;7754;7755;7756;7757;7758;7759;7760;7761 7755 11 3085400 1900000 FAAKGEGQLGPAER WAFTLKQFAEMYVAKFAAKGEGQLGPAERA KFAAKGEGQLGPAERAKKVEDMMKKLWGDR K F A E R A 3 1 0 0 0 1 2 3 0 0 1 1 0 1 1 0 0 0 0 0 0 0 14 1 1429.7314 P13639 P13639 236 249 EEF2 Elongation factor 2 yes yes 2 0.0023543 139.78 By MS/MS 4 0 1 1 1067300 1067300 0 4081 602 4225 9447 7762;7763 7762 2 100440 0 FAANINKESIVDVEGVVR ALVAVGDHASKQMVKFAANINKESIVDVEG NINKESIVDVEGVVRKVNQKIGSCTQQDVE K F A V R K 2 1 2 1 0 0 2 1 0 2 0 1 0 1 0 1 0 0 0 4 0 0 18 1 1959.0425 P14868 P14868 104 121 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2;3 0.00018847 175.6 By MS/MS 6 0 2 2 7265100 7265100 0 4082 620 4226 9448;9449 7764;7765;7766 7764 3 49942 0 FAASNPCGNIQR HRPHYSLRTLCRALRFAASNPCGNIQRSLY ALRFAASNPCGNIQRSLYEGFCLGFLTQLD R F A Q R S 2 1 2 0 1 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 12 0 1333.6197 Q9NU22 Q9NU22 973 984 MDN1 Midasin yes yes 2 7.1316E-05 160.77 By MS/MS 2 0.816 1 1 1 3 1028300 1028300 0 4083 2580 4227 9450;9451;9452 7767;7768 7767 2 224850 0 FAATTVEEILAK GVRKAPAPFRPASERFAATTVEEILAKMEQ SERFAATTVEEILAKMEQPRKEVLASPDRL R F A A K M 3 0 0 0 0 0 2 0 0 1 1 1 0 1 0 0 2 0 0 1 0 0 12 0 1291.7024 Q9C0C2 Q9C0C2 156 167 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 4.2063E-05 169.93 By MS/MS 2 0 1 1 140450 140450 0 4084 2390 4228 9453 7769;7770 7770 2 47507 0 FACHSASLTVR ELDNMPLRGKQLRVRFACHSASLTVRNLPQ LRVRFACHSASLTVRNLPQYVSNELLEEAF R F A V R N 2 1 0 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1247.6081 Q15233 Q15233 143 153 NONO Non-POU domain-containing octamer-binding protein yes yes 3 0.005818 87.789 By MS/MS 6 0 1 1 1192500 1192500 0 4085 1496 4229 9454 7771 7771 1 8197.7 0 FADQHVPGSPFSVK TYCPTEPGNYIINIKFADQHVPGSPFSVKV KFADQHVPGSPFSVKVTGEGRVKESITRRR K F A V K V 1 0 0 1 0 1 0 1 1 0 0 1 0 2 2 2 0 0 0 2 0 0 14 0 1514.7518 P21333 P21333 2120 2133 FLNA Filamin-A yes yes 3 0.007895 92.039 By MS/MS 1.5 0.5 1 1 2 418040 418040 0 4086 677 4230 9455;9456 7772 7772 1 133310 0 FAEAFEAIPR YGETCPGLEQYAIKKFAEAFEAIPRALAEN YAIKKFAEAFEAIPRALAENSGVKANEVIS K F A P R A 3 1 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 10 0 1149.5819 P50990 P50990 441 450 CCT8 T-complex protein 1 subunit theta yes yes 2 9.342E-08 193.1 By MS/MS By MS/MS 5.11 2.85 1 1 1 1 1 2 1 1 8 1 200270000 200090000 187410 4087 984 4231 9457;9458;9459;9460;9461;9462;9463;9464;9465 7773;7774;7775;7776;7777;7778;7779;7780;7781;7782 7779 10 1749700 192040 FAEALGSTEAK ITKLRKMVDQLFCKKFAEALGSTEAKAVPY FCKKFAEALGSTEAKAVPYQKFEAHPNDLY K F A A K A 3 0 0 0 0 0 2 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1122.5557 P78347 P78347 478 488 GTF2I General transcription factor II-I yes yes 2 9.8794E-07 190.96 By MS/MS 3 0 1 1 3474500 3474500 0 4088 1221 4232 9466 7783 7783 1 63574 0 FAETQPK EVKLCEKMAQFDAKKFAETQPKKDTPRKEK MAQFDAKKFAETQPKKDTPRKEKGSREEKQ K F A P K K 1 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 7 0 819.41267 P26641 P26641 221 227 EEF1G Elongation factor 1-gamma yes yes 2 0.017129 116.88 By MS/MS 7 0.816 1 1 1 3 14612000 14612000 0 4089 736 4233 9467;9468;9469 7784;7785 7784 2 132410 0 FAEVECLAESHQHLSK MSEDPSHPSMALNTRFAEVECLAESHQHLS AEVECLAESHQHLSKESMAGNKPANAVLHK R F A S K E 2 0 0 0 1 1 3 0 2 0 2 1 0 1 0 2 0 0 0 1 0 0 16 0 1883.8836 Q14839 Q14839 1822 1837 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 3 0.006599 93.243 By MS/MS 2 0 1 1 1066300 1066300 0 4090 1459 4234 9470 7786 7786 1 360680 0 FAEVYFAQSQQK EVPIKEEGDYVLVLKFAEVYFAQSQQKVFD VLKFAEVYFAQSQQKVFDVRLNGHVVVKDL K F A Q K V 2 0 0 0 0 3 1 0 0 0 0 1 0 2 0 1 0 0 1 1 0 0 12 0 1444.6987 Q14165 Q14165 127 138 MLEC Malectin yes yes 2 4.5347E-06 189.17 By MS/MS 8 0 1 1 3485200 3485200 0 4091 1426 4235 9471 7787;7788 7788 2 44001 0 FAFQAEVNR LNASQIRELREKSEKFAFQAEVNRMMKLII REKSEKFAFQAEVNRMMKLIINSLYKNKEI K F A N R M 2 1 1 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 9 0 1080.5352 P14625 P14625 76 84 HSP90B1 Endoplasmin yes yes 2 0.0017156 124.92 By MS/MS 4 0 1 1 1641600 1641600 0 4092 615 4236 9472 7789 7789 1 154480 0 FAGVDIR QYKLLEPVLLLGKERFAGVDIRVRVKGGGH VLLLGKERFAGVDIRVRVKGGGHVAQIYAI R F A I R V 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 776.41809 P62249 P62249 63 69 RPS16 40S ribosomal protein S16 yes yes 2 0.026402 107.43 By MS/MS By matching 9.67 0.471 1 2 2 1 48553000 48177000 375730 4093 1145 4237 9473;9474;9475 7790;7791 7791 2 2545700 481030 FAGVDIRVR QYKLLEPVLLLGKERFAGVDIRVRVKGGGH LLGKERFAGVDIRVRVKGGGHVAQIYAIRQ R F A V R V 1 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 9 1 1031.5876 P62249 P62249 63 71 RPS16 40S ribosomal protein S16 yes yes 2 0.00039116 160.11 By MS/MS 10 0 1 1 1397700 1397700 0 4094 1145 4238 9476 7792 7792 1 75333 0 FAIQDISVEETSAK NAKMTLGMIWTIILRFAIQDISVEETSAKE RFAIQDISVEETSAKEGLLLWCQRKTAPYK R F A A K E 2 0 0 1 0 1 2 0 0 2 0 1 0 1 0 2 1 0 0 1 0 0 14 0 1536.7672 O43707;P35609;Q08043;P12814 O43707 153 166 ACTN4;ACTN2;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-1 no no 2 4.1764E-07 204.85 By MS/MS 4 0 1 1 3393900 3393900 0 4095 229;595 4239 9477 7793 7793 1 319390 0 FAIYETVR LSASLCRQMTYSLTRFAIYETVRDRVAKGS MTYSLTRFAIYETVRDRVAKGSQGPLPFHE R F A V R D 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 8 0 997.52328 Q9UBX3 Q9UBX3 79 86 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.0055942 122.74 By MS/MS 9 0.816 1 1 1 3 12593000 12593000 0 4096 2709 4240 9478;9479;9480 7794 7794 1 167530 0 FAIYETVRDR LSASLCRQMTYSLTRFAIYETVRDRVAKGS YSLTRFAIYETVRDRVAKGSQGPLPFHEKV R F A D R V 1 2 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 10 1 1268.6513 Q9UBX3 Q9UBX3 79 88 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.020955 107.29 By MS/MS 9 0.816 1 1 1 3 13391000 13391000 0 4097 2709 4241 9481;9482;9483 7795 7795 1 175330 0 FALEVPGLR HVLEGLAASGLRSIRFALEVPGLRSVVAND GLRSIRFALEVPGLRSVVANDASTRAVDLI R F A L R S 1 1 0 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 1 0 0 9 0 1000.5706 Q9NXH9 Q9NXH9 170 178 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.011132 98.458 By MS/MS 5 0 1 1 280440 280440 0 4098 2625 4242 9484 7796 7796 1 2812.6 0 FANSFIPK NLASTRKYFTQFCVKFANSFIPKFITHLFK FTQFCVKFANSFIPKFITHLFKCKPISMVG K F A P K F 1 0 1 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 0 8 0 922.49125 Q5VIR6 Q5VIR6 670 677 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0064572 118.74 By MS/MS 4 0 1 1 573940 573940 0 4099 1644 4243 9485 7797 7797 1 54012 0 FAQALGLTEAVK ITKLRKQVEEIFNLKFAQALGLTEAVKVPY NLKFAQALGLTEAVKVPYPVFESNPEFLYV K F A V K V 3 0 0 0 0 1 1 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1246.6921 P78347 P78347 583 594 GTF2I General transcription factor II-I yes yes 2 0.00040539 155.33 By MS/MS 3.5 0.5 1 1 2 2264700 2264700 0 4100 1221 4244 9486;9487 7798;7799;7800 7799 3 134520 0 FAQILTR LSDANLSRYGIHPAKFAQILTRDPQVNAFA RYGIHPAKFAQILTRDPQVNAFAIFIGSLG K F A T R D 1 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 7 0 847.49159 A3KMH1 A3KMH1 1844 1850 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.040933 96.492 By MS/MS 2 0 1 1 290900 290900 0 4101 14 4245 9488 7801 7801 1 98395 0 FAQIVQK CVDRFIDTTLAITSRFAQIVQKGGQ_____ TTLAITSRFAQIVQKGGQ____________ R F A Q K G 1 0 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 7 0 832.48069 Q9Y5J9 Q9Y5J9 74 80 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 0.0039751 160.17 By MS/MS 10 0 1 1 1808100 1808100 0 4102 2911 4246 9489 7802 7802 1 97452 0 FAQLALER PEDSDMPDHDLEPPRFAQLALERVLQDWNA HDLEPPRFAQLALERVLQDWNALKSMIMFG R F A E R V 2 1 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 946.52362 O95071 O95071 1324 1331 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0059503 121.09 By MS/MS 1.5 0.5 1 1 2 2512200 2512200 0 4103 384 4247 9490;9491 7803;7804 7803 2 797370 0 FAQPGSFEYEYAMR IKNQQFHKEREQPPRFAQPGSFEYEYAMRW RFAQPGSFEYEYAMRWKALIEMEKQQQDQV R F A M R W 2 1 0 0 0 1 2 1 0 0 0 0 1 2 1 1 0 0 2 0 0 0 14 0 1694.7399 Q15233 Q15233 257 270 NONO Non-POU domain-containing octamer-binding protein yes yes 2 0.015621 87.216 By MS/MS 6 0 1 1 1743000 1743000 0 4104 1496 4248 9492 7805 7805 1 11981 0 FAQQHQAR LIRHFRPELEERMQRFAQQHQARQAAS___ LEERMQRFAQQHQARQAAS___________ R F A A R Q 2 1 0 0 0 3 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 984.48896 P49821 P49821 453 460 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.0043372 128.57 By MS/MS 6.5 0.5 1 1 2 641240 641240 0 4105 966 4249 9493;9494 7806 7806 1 6053.2 0 FASEAEDKIR VYLTNSLELEHIEVKFASEAEDKIREDCCP HIEVKFASEAEDKIREDCCPGKPLNVFRIE K F A I R E 2 1 0 1 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 10 1 1164.5775 Q9P2J5 Q9P2J5 1040 1049 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2;3 0.00082841 137.05 By MS/MS 3 0 2 2 958260 958260 0 4106 2684 4250 9495;9496 7807;7808 7807 2 17533 0 FASEIAGVDDLGTTGR KTIMTRCIQCTRCIRFASEIAGVDDLGTTG ASEIAGVDDLGTTGRGNDMQVGTYIEKMFM R F A G R G 2 1 0 2 0 0 1 3 0 1 1 0 0 1 0 1 2 0 0 1 0 0 16 0 1607.7791 P28331 P28331 185 200 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 5.3055E-24 279.62 By MS/MS 5 0 1 1 5373900 5373900 0 4107 753 4251 9497 7809 7809 1 53897 0 FASENDLPEWK EDEEELFKMRAKLFRFASENDLPEWKERGT KLFRFASENDLPEWKERGTGDVKLLKHKEK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 P43487 P43487 58 68 RANBP1 Ran-specific GTPase-activating protein yes yes 2 1.9987E-05 163.88 By MS/MS 8 0 1 1 3065800 3065800 0 4108 899 4252 9498 7810 7810 1 38705 0 FASENDLPEWKER EDEEELFKMRAKLFRFASENDLPEWKERGT FRFASENDLPEWKERGTGDVKLLKHKEKGA R F A E R G 1 1 1 1 0 0 3 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 13 1 1619.758 P43487 P43487 58 70 RANBP1 Ran-specific GTPase-activating protein yes yes 2;3 1.6462E-11 232.56 By MS/MS 8 0 2 2 8554100 8554100 0 4109 899 4253 9499;9500 7811;7812 7812 2 107990 0 FASFIDK VKAQEREQIKTLNNKFASFIDKVRFLEQQN QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K F A D K V 1 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 7 0 826.4225 CON__P13647;P13647;CON__P05787;P05787;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__Q9H552;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q14CN4-1;CON__Q6IME9;Q14CN4;CON__Q3SY84;Q3SY84;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q3TTY5;CON__Q7Z794;Q7Z794;CON__Q5XKE5;Q5XKE5 CON__P35908v2 189 195 KRT5;KRT8;KRT84;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT72;KRT71;KRT74;KRT73;KRT77;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 79 no no 2 0.008165 158.36 By MS/MS By MS/MS 5.38 2.98 2 1 1 1 2 1 1 1 2 1 6 7 29495000 14993000 14501000 + 4110 55;52;44;56;40;74;48;65;72;68;62;60 4254 9501;9502;9503;9504;9505;9506;9507;9508;9509;9510;9511;9512;9513 7813;7814;7815;7816;7817;7818;7819 7816 7 1414600 4929900 FASFIDKVR VKAQEREQIKTLNNKFASFIDKVRFLEQQN KTLNNKFASFIDKVRFLEQQNQVLQTKWEL K F A V R F 1 1 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 1 0 0 9 1 1081.592 CON__P13647;P13647;CON__P05787;P05787;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q14CN4-1;CON__Q6IME9;Q14CN4;CON__Q3SY84;Q3SY84;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q3TTY5;CON__Q7Z794;Q7Z794;CON__Q5XKE5;Q5XKE5 CON__P35908v2 189 197 KRT5;KRT8;KRT84;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT72;KRT71;KRT74;KRT73;KRT77;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 79 no no 2;3 0.0015852 149.57 By MS/MS By MS/MS 4.81 2.69 4 4 4 2 4 5 3 1 2 2 20 11 77392000 44127000 33266000 + 4111 55;52;44;56;40;74;48;65;72;68;62;60 4255 9514;9515;9516;9517;9518;9519;9520;9521;9522;9523;9524;9525;9526;9527;9528;9529;9530;9531;9532;9533;9534;9535;9536;9537;9538;9539;9540;9541;9542;9543;9544 7820;7821;7822;7823;7824;7825;7826;7827;7828;7829;7830;7831;7832;7833;7834;7835;7836;7837;7838;7839 7832 20 2685200 6579100 FASGGCDNLIK LIDHPSGQKPNYIKRFASGGCDNLIKLWKE YIKRFASGGCDNLIKLWKEEEDGQWKEEQK R F A I K L 1 0 1 1 1 0 0 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1180.5547 P55735 P55735 182 192 SEC13 Protein SEC13 homolog yes yes 2 0.00037769 133.99 By MS/MS 7.5 0.5 1 1 2 2796800 2796800 0 4112 1060 4256 9545;9546 7840;7841 7840 2 42296 0 FASLQPVSNQIER KALFVKLKSCRPDSRFASLQPVSNQIERCN SRFASLQPVSNQIERCNSLAFGGYLSEVVE R F A E R C 1 1 1 0 0 2 1 0 0 1 1 0 0 1 1 2 0 0 0 1 0 0 13 0 1487.7732 Q9NQC7 Q9NQC7 545 557 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD yes yes 2 0.00022645 159.99 By MS/MS 4 0 1 1 1044400 1044400 0 4113 2537 4257 9547 7842 7842 1 98289 0 FASNVVEK VAEIRGNVLVLSQHKFASNVVEKCVTHASR LVLSQHKFASNVVEKCVTHASRTERAVLID K F A E K C 1 0 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 8 0 892.46543 Q14671;Q8TB72 Q14671 1077 1084 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 yes no 2 0.00032775 163.9 By MS/MS 4 0.816 1 1 1 3 2129500 2129500 0 4114 1448 4258 9548;9549;9550 7843 7843 1 86847 0 FASYLTFSPSEVK DMLRVEQVKIHAGPKFASYLTFSPSEVKSL PKFASYLTFSPSEVKSLRTEYGDLELCIEV K F A V K S 1 0 0 0 0 0 1 0 0 0 1 1 0 2 1 3 1 0 1 1 0 0 13 0 1474.7344 P54886 P54886 650 662 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 7.6988E-18 268.73 By MS/MS 6 1.41 1 1 1 1 1 5 12997000 12997000 0 4115 1048 4259 9551;9552;9553;9554;9555 7844;7845;7846 7845 3 175290 0 FATEAAITILR AGVFEPTIVKVKSLKFATEAAITILRIDDL KSLKFATEAAITILRIDDLIKLHPESKDDK K F A L R I 3 1 0 0 0 0 1 0 0 2 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1204.6816 P17987 P17987 516 526 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.032427 79.148 By MS/MS 1 0 1 1 59064 59064 0 4116 648 4260 9556 7847 7847 1 14233 0 FATEYCNTIEGTAK PVDDKSATLLQLITKFATEYCNTIEGTAKY KFATEYCNTIEGTAKYIETSELCGGARICY K F A A K Y 2 0 1 0 1 0 2 1 0 1 0 1 0 1 0 0 3 0 1 0 0 0 14 0 1603.7188 O00429 O00429 340 353 DNM1L Dynamin-1-like protein yes yes 2 1.6204E-43 322.77 By MS/MS 5 0 1 1 2834600 2834600 0 4117 105 4261 9557 7848 7848 1 28429 0 FATHAAALSVR ELDDTPMRGRQLRVRFATHAAALSVRNLSP LRVRFATHAAALSVRNLSPYVSNELLEEAF R F A V R N 4 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 1 0 0 11 0 1142.6196 P23246 P23246 366 376 SFPQ Splicing factor, proline- and glutamine-rich yes yes 3 0.0061963 119.27 By MS/MS 4 0 1 1 1206600 1206600 0 4118 700 4262 9558 7849 7849 1 113550 0 FAVFGLGNK YDWLQETDVDLSGVKFAVFGLGNKTYEHFN DLSGVKFAVFGLGNKTYEHFNAMGKYVDKR K F A N K T 1 0 1 0 0 0 0 2 0 0 1 1 0 2 0 0 0 0 0 1 0 0 9 0 951.5178 P16435 P16435 168 176 POR NADPH--cytochrome P450 reductase yes yes 2 0.00062006 143.02 By MS/MS 5 0 1 1 1741400 1741400 0 4119 634 4263 9559 7850 7850 1 17466 0 FAVGTAGLGAEER TWLARRGAPGDVWARFAVGTAGLGAEERRA ARFAVGTAGLGAEERRALEREQARHGDLLL R F A E R R 3 1 0 0 0 0 2 3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13 0 1276.6412 Q96L58 Q96L58 94 106 B3GALT6 Beta-1,3-galactosyltransferase 6 yes yes 2 0.033524 77.288 By MS/MS 7 0 1 1 1632700 1632700 0 4120 2193 4264 9560 7851 7851 1 25631 0 FAVLHGEAPR KETIIAFAWEPNGSKFAVLHGEAPRISVSF PNGSKFAVLHGEAPRISVSFYHVKNNGKIE K F A P R I 2 1 0 0 0 0 1 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 10 0 1095.5825 P55884 P55884 577 586 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0014511 114.89 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 26077000 26077000 0 4121 1065 4265 9561;9562;9563;9564;9565;9566;9567;9568 7852;7853;7854;7855;7856;7857;7858 7855 7 2011100 0 FAYVPFGAGR NPDRYLQDNPASGEKFAYVPFGAGRHRCIG ASGEKFAYVPFGAGRHRCIGENFAYVQIKT K F A G R H 2 1 0 0 0 0 0 2 0 0 0 0 0 2 1 0 0 0 1 1 0 0 10 0 1083.5502 Q16850 Q16850 437 446 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 0.0073981 100.19 By MS/MS 6 0 1 1 2162000 2162000 0 4122 1561 4266 9569 7859 7859 1 14862 0 FCADSDGFSQELR KSKDIVNKMTFHSQKFCADSDGFSQELRNF QKFCADSDGFSQELRNFNQEGTKLVEESVK K F C L R N 1 1 0 2 1 1 1 1 0 0 1 0 0 2 0 2 0 0 0 0 0 0 13 0 1530.6409 P52732 P52732 772 784 KIF11 Kinesin-like protein KIF11 yes yes 2 1.2666E-17 267.39 By MS/MS 3.5 0.5 1 1 2 662760 662760 0 4123 1021 4267 9570;9571 7860 7860 1 31973 0 FCAFTLSK ILDEMSHKLRLGAIRFCAFTLSKVFKQIFS LRLGAIRFCAFTLSKVFKQIFSKVCVNEEG R F C S K V 1 0 0 0 1 0 0 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 8 0 972.47389 O15228 O15228 121 128 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.018237 101.6 By MS/MS 5 0 1 1 648230 648230 0 4124 171 4268 9572 7861 7861 1 6501.4 0 FCAGILSTAR IVLLEQGRLAAGSTRFCAGILSTARHLTIE AGSTRFCAGILSTARHLTIEQKMADYSNKL R F C A R H 2 1 0 0 1 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 0 10 0 1094.5543 Q8NCN5 Q8NCN5 84 93 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 0.033175 80.455 By MS/MS 4 0 1 1 842730 842730 0 4125 1953 4269 9573 7862 7862 1 79307 0 FCANTCVECR VQKDGHHCCLKCFDKFCANTCVECRKPIGA KCFDKFCANTCVECRKPIGADSKEVHYKNR K F C C R K 1 1 1 0 3 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 10 0 1315.5108 Q13642 Q13642 35 44 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.010011 109.44 By MS/MS 8 0 1 1 405690 405690 0 4126 1407 4270 9574 7863 7863 0 5121.8 0 FCDNSSAIQGK IMSTQESSNPNNVLKFCDNSSAIQGKEVRF NVLKFCDNSSAIQGKEVRFLRPEDPTRPSR K F C G K E 1 0 1 1 1 1 0 1 0 1 0 1 0 1 0 2 0 0 0 0 0 0 11 0 1225.5397 O15067 O15067 269 279 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.00078022 125.97 By MS/MS 3 0 1 1 373620 373620 0 4127 157 4271 9575 7864 7864 1 6836.3 0 FCEDLFSQVAR YTMMGFSEEPGIIPRFCEDLFSQVARKQTQ IIPRFCEDLFSQVARKQTQEVSYHIEMSFF R F C A R K 1 1 0 1 1 1 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 11 0 1370.6289 Q15058 Q15058 470 480 KIF14 Kinesin-like protein KIF14 yes yes 2 0.00016733 145.99 By MS/MS 3.5 1.12 1 1 1 1 4 1423900 1423900 0 4128 1486 4272 9576;9577;9578;9579 7865 7865 1 163480 0 FCEEFKEK MDPNSTQRYRLEALKFCEEFKEKCPICVPC YRLEALKFCEEFKEKCPICVPCGLRLAEKT K F C E K C 0 0 0 0 1 0 3 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 8 1 1115.4957 Q9HAV4 Q9HAV4 36 43 XPO5 Exportin-5 yes yes 3 0.015724 109.01 By MS/MS 3 0 1 1 147690 147690 0 4129 2495 4273 9580 7866 7866 1 2702.3 0 FCEKAMELIRELHR ______________________________ MFCEKAMELIRELHRAPEGQLPAFNEDGLR M F C H R A 1 2 0 0 1 0 3 0 1 1 2 1 1 1 0 0 0 0 0 0 0 0 14 2 1830.9233 Q14691 Q14691 2 15 GINS1 DNA replication complex GINS protein PSF1 yes yes 4 0.032556 42.789 By MS/MS 8 0 1 1 623300 623300 0 4130 1452 4274 9581 7867 7867 1 7869.1 0 FCELLIGR RDTALTIAADKGHYKFCELLIGRGAHIDVR ADKGHYKFCELLIGRGAHIDVRNKKGNTPL K F C G R G 0 1 0 0 1 0 1 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 1006.527 O75179 O75179 1335 1342 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.018484 101.33 By MS/MS 2 0 1 1 179710 179710 0 4131 304 4275 9582 7868 7868 1 60786 0 FCFTPHTEEGCLSER APRRQQEQQVPILEKFCFTPHTEEGCLSER FCFTPHTEEGCLSERAALQEELQLCKGLVQ K F C E R A 0 1 0 0 2 0 3 1 1 0 1 0 0 2 1 1 2 0 0 0 0 0 15 0 1868.7822 P49327 P49327 1117 1131 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00010475 185.3 By MS/MS 4.1 2.21 1 2 2 1 1 1 1 1 10 13505000 13505000 0 4132 946 4276 9583;9584;9585;9586;9587;9588;9589;9590;9591;9592 7869;7870;7871;7872 7871 4 3292000 0 FCIQEIEK EKAPAHHPAAISTAKFCIQEIEKSGGSKEA AAISTAKFCIQEIEKSGGSKEATTTLHMLT K F C E K S 0 0 0 0 1 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1065.5165 Q5JTH9 Q5JTH9 287 294 RRP12 RRP12-like protein yes yes 2 0.0011916 151.04 By MS/MS 3 0 1 1 840060 840060 0 4133 1610 4277 9593 7873 7873 1 15371 0 FCLICNYLSK NALRRVIEKFTENTRFCLICNYLSKIIPAL TENTRFCLICNYLSKIIPALQSRCTRFRFG R F C S K I 0 0 1 0 2 0 0 0 0 1 2 1 0 1 0 1 0 0 1 0 0 0 10 0 1316.6257 P40937 P40937 151 160 RFC5 Replication factor C subunit 5 yes yes 2 0.0011712 120.31 By MS/MS 7 0 1 1 227000 227000 0 4134 863 4278 9594 7874 7874 1 3563.5 0 FCLICNYVSR AALRRTMEKESKTTRFCLICNYVSRIIEPL SKTTRFCLICNYVSRIIEPLTSRCSKFRFK R F C S R I 0 1 1 0 2 0 0 0 0 1 1 0 0 1 0 1 0 0 1 1 0 0 10 0 1330.6162 P35249 P35249 176 185 RFC4 Replication factor C subunit 4 yes yes 2 0.001315 117.53 By MS/MS 7 0 1 1 672520 672520 0 4135 816 4279 9595 7875 7875 1 10557 0 FCLQYTR RVERLYHDIAQQAFKFCLQYTRKAEFRKLC DIAQQAFKFCLQYTRKAEFRKLCDNLRMHL K F C T R K 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 7 0 986.46439 Q14152 Q14152 184 190 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.013192 127.12 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 25572000 25572000 0 4136 1422 4280 9596;9597;9598;9599;9600;9601;9602;9603 7876;7877;7878;7879 7876 4 960640 0 FCQLLWR WTFQGRLLQKNNKDRFCQLLWRPRPPTLLS LQKNNKDRFCQLLWRPRPPTLLSQEQIKQI R F C W R P 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 7 0 1021.5168 P55884 P55884 699 705 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.011038 132.72 By MS/MS 4.5 0.5 1 1 2 402470 402470 0 4137 1065 4281 9604;9605 7880 7880 1 27924 0 FCVQPQLLR KPQWLRAVAVESIHRFCVQPQLLRSFCQSY VESIHRFCVQPQLLRSFCQSYDMKQHSTKV R F C L R S 0 1 0 0 1 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 9 0 1159.6172 Q7Z3U7 Q7Z3U7 362 370 MON2 Protein MON2 homolog yes yes 2 0.00081022 137.18 By MS/MS 2 0 1 1 576030 576030 0 4138 1787 4282 9606 7881 7881 1 194840 0 FDAGELITQR LPSITTEILKSVVARFDAGELITQRELVSR SVVARFDAGELITQRELVSRQVSDDLTERA R F D Q R E 1 1 0 1 0 1 1 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1148.5826 P35232 P35232 134 143 PHB Prohibitin yes yes 2 1.2908E-07 189.18 By MS/MS By MS/MS 8.57 0.728 4 2 1 6 1 186470000 185390000 1077400 4139 814 4283 9607;9608;9609;9610;9611;9612;9613 7882;7883;7884;7885;7886;7887 7886 6 2453800 1453900 FDAGELITQRELVSR LPSITTEILKSVVARFDAGELITQRELVSR FDAGELITQRELVSRQVSDDLTERAATFGL R F D S R Q 1 2 0 1 0 1 2 1 0 1 2 0 0 1 0 1 1 0 0 1 0 0 15 1 1732.9108 P35232 P35232 134 148 PHB Prohibitin yes yes 2;3 0.0063683 117.86 By MS/MS 8 0 2 2 5722500 5722500 0 4140 814 4284 9614;9615 7888;7889 7889 2 72245 0 FDASFFGVHPK YGLPRRSGKLKDLSRFDASFFGVHPKQAHT DLSRFDASFFGVHPKQAHTMDPQLRLLLEV R F D P K Q 1 0 0 1 0 0 0 1 1 0 0 1 0 3 1 1 0 0 0 1 0 0 11 0 1250.6084 P49327 P49327 60 70 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 1.2849E-06 187.22 By MS/MS 4.93 2.6 1 2 2 2 2 2 2 1 14 13619000 13619000 0 4141 946 4285 9616;9617;9618;9619;9620;9621;9622;9623;9624;9625;9626;9627;9628;9629 7890;7891;7892;7893;7894;7895;7896;7897;7898 7896 9 2090900 0 FDDGAGGDNEVQR CLIFFDEIDAIGGARFDDGAGGDNEVQRTM ARFDDGAGGDNEVQRTMLELINQLDGFDPR R F D Q R T 1 1 1 3 0 1 1 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1378.5749 P35998 P35998 285 297 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.3897E-07 208.17 By MS/MS 7 0.632 1 3 1 5 9205100 9205100 0 4142 831 4286 9630;9631;9632;9633;9634 7899;7900;7901 7900 3 126220 0 FDDPLLGPR MNRGIKDLSKVKLMRFDDPLLGPRRVPVLG KVKLMRFDDPLLGPRRVPVLGKEYTEKTPI R F D P R R 0 1 0 2 0 0 0 1 0 0 2 0 0 1 2 0 0 0 0 0 0 0 9 0 1028.5291 Q9P2J5 Q9P2J5 1118 1126 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0017108 124.98 By MS/MS 4.17 2.91 1 1 1 1 1 1 6 5298300 5298300 0 4143 2684 4287 9635;9636;9637;9638;9639;9640 7902;7903;7904;7905;7906 7904 5 165590 0 FDDTNPEKEKEDFEK NQHYQVNFKGKLIMRFDDTNPEKEKEDFEK FDDTNPEKEKEDFEKVILEDVAMLHIKPDQ R F D E K V 0 0 1 3 0 0 4 0 0 0 0 3 0 2 1 0 1 0 0 0 0 0 15 2 1869.8269 P07814 P07814 236 250 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.012907 87.083 By MS/MS 5 1.41 1 1 1 1 1 5 6321900 6321900 0 4144 512 4288 9641;9642;9643;9644;9645 7907;7908;7909 7909 3 139940 0 FDEIFSATR DSNWPLSEGKALKQKFDEIFSATRYIKALE KALKQKFDEIFSATRYIKALETLRQVRQTQ K F D T R Y 1 1 0 1 0 0 1 0 0 1 0 0 0 2 0 1 1 0 0 0 0 0 9 0 1084.5189 Q92878 Q92878 176 184 RAD50 DNA repair protein RAD50 yes yes 2 0.0093162 101.65 By MS/MS 3 0 1 1 97427 97427 0 4145 2074 4289 9646 7910 7910 1 1782.6 0 FDEISFVNFAR ERGFIYVHKPPVHIRFDEISFVNFARGTTT VHIRFDEISFVNFARGTTTTRSFDFEIETK R F D A R G 1 1 1 1 0 0 1 0 0 1 0 0 0 3 0 1 0 0 0 1 0 0 11 0 1343.651 Q08945 Q08945 371 381 SSRP1 FACT complex subunit SSRP1 yes yes 2 3.2132E-09 212.21 By MS/MS 5.5 0.5 1 1 2 1487800 1487800 0 4146 1313 4290 9647;9648 7911;7912 7912 2 12793 0 FDEVLIR YVRCIKPNDAKQPGRFDEVLIRHQVKYLGL NDAKQPGRFDEVLIRHQVKYLGLLENLRVR R F D I R H 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 890.48617 O00159 O00159 637 643 MYO1C Unconventional myosin-Ic yes yes 2 0.032667 102.71 By MS/MS 4 0 1 1 1008700 1008700 0 4147 85 4291 9649 7913 7913 1 94921 0 FDEVLYK LQEPQSVSILQHLLRFDEVLYKSSQDFQPR SILQHLLRFDEVLYKSSQDFQPRHIVSYLL R F D Y K S 0 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 7 0 912.45928 Q5T160 Q5T160 505 511 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.048731 90.777 By MS/MS 6 0 1 1 1888400 1888400 0 4148 1627 4292 9650 7914 7914 1 12981 0 FDEYFSQSCAPGSDPR NIPMGLLFNQTGSCKFDEYFSQSCAPGSDP DEYFSQSCAPGSDPRSNLCALCIGDEQGEN K F D P R S 1 1 0 2 1 1 1 1 0 0 0 0 0 2 2 3 0 0 1 0 0 0 16 0 1861.7577 P02788 P02788 504 519 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 1.5491E-07 194.3 By MS/MS 1 0 1 1 113360 0 113360 4149 459 4293 9651 7915 7915 1 0 113360 FDGDVGVFPLEFNK VTGPGKRYLQVSKNRFDGDVGVFPLEFNKN RFDGDVGVFPLEFNKNSLTFSIPPKNKARL R F D N K N 0 0 1 2 0 0 1 2 0 0 1 1 0 3 1 0 0 0 0 2 0 0 14 0 1582.7668 Q96RR1 Q96RR1 610 623 PEO1 Twinkle protein, mitochondrial yes yes 2 0.0017181 113.22 By MS/MS 5 0 1 1 53116 53116 0 4150 2225 4294 9652 7916 7916 1 532.72 0 FDGGVEAIATR SYNRTFMKLGPEAFRFDGGVEAIATRQNEK EAFRFDGGVEAIATRQNEKYYILRPEVMET R F D T R Q 2 1 0 1 0 0 1 2 0 1 0 0 0 1 0 0 1 0 0 1 0 0 11 0 1134.5669 P33908 P33908 526 536 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes yes 2 0.0051721 113.44 By MS/MS 5 0 1 1 699910 699910 0 4151 804 4295 9653 7917 7917 1 7019.7 0 FDITIGPK VKHSISFKENSSCGRFDITIGPKQNMGKTI ENSSCGRFDITIGPKQNMGKTIEGITVTVH R F D P K Q 0 0 0 1 0 0 0 1 0 2 0 1 0 1 1 0 1 0 0 0 0 0 8 0 889.49092 Q9Y2T2 Q9Y2T2 291 298 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.018237 101.6 By MS/MS 7 0 1 1 677490 677490 0 4152 2843 4296 9654 7918 7918 1 10635 0 FDKEEEIRK EKNGLNLLRRLWVVKFDKEEEIRKLAERLW RLWVVKFDKEEEIRKLAERLWSMMGLDLQP K F D R K L 0 1 0 1 0 0 3 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 9 2 1192.6088 Q92616 Q92616 1135 1143 GCN1L1 Translational activator GCN1 yes yes 3 0.0094364 114.86 By MS/MS 2.5 0.5 1 1 2 827290 827290 0 4153 2064 4297 9655;9656 7919 7919 1 222820 0 FDLGIICVDNK RSKIEIVRRILGVQKFDLGIICVDNKNIQH GVQKFDLGIICVDNKNIQHINRIYRDRNVP K F D N K N 0 0 1 2 1 0 0 1 0 2 1 1 0 1 0 0 0 0 0 1 0 0 11 0 1292.6435 P58557 P58557 35 45 YBEY Putative ribonuclease yes yes 2 0.00048678 131.82 By MS/MS 9.5 0.5 1 1 2 162440 162440 0 4154 1086 4298 9657;9658 7920;7921;7922 7922 3 5843.1 0 FDLLEELVAK KQAFAHVSKLLSQCKFDLLEELVAKEVLHA LSQCKFDLLEELVAKEVLHALKEKVTSLPD K F D A K E 1 0 0 1 0 0 2 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1175.6438 Q8WWC4 Q8WWC4 164 173 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.0044249 106.88 By MS/MS 9 0 1 1 83289 83289 0 4155 2034 4299 9659 7923;7924 7924 2 1639.1 0 FDLPTEYR VEEGVDIPKCNLVVRFDLPTEYRSYVQSKG KCNLVVRFDLPTEYRSYVQSKGRARAPISN R F D Y R S 0 1 0 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 8 0 1039.4975 Q9UPY3 Q9UPY3 537 544 DICER1 Endoribonuclease Dicer yes yes 2 0.047932 83.265 By MS/MS 2.5 0.5 1 1 2 207550 207550 0 4156 2803 4300 9660;9661 7925 7925 1 59521 0 FDLQQLQR ______________________________ MFQYWKRFDLQQLQRELDATATVLANRQDE R F D Q R E 0 1 0 1 0 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 1046.5509 Q13948 Q13948 15 22 CUX1 Protein CASP yes yes 2 0.0067473 117.4 By MS/MS 5 0 1 1 403110 403110 0 4157 1415 4301 9662 7926 7926 1 4042.9 0 FDMIVPILEK LMKICMNEDPAKRPKFDMIVPILEKMQDK_ AKRPKFDMIVPILEKMQDK___________ K F D E K M 0 0 0 1 0 0 1 0 0 2 1 1 1 1 1 0 0 0 0 1 0 0 10 0 1203.6573 Q13418 Q13418 439 448 ILK Integrin-linked protein kinase yes yes 2 0.00093253 124.92 By MS/MS 6 0 1 1 432710 432710 0 4158 1380 4302 9663 7927 7927 1 2974.6 0 FDPTWESLDAR LLLPPPPCPAHSATRFDPTWESLDARQLPA SATRFDPTWESLDARQLPAWFDQAKFGIFI R F D A R Q 1 1 0 2 0 0 1 0 0 0 1 0 0 1 1 1 1 1 0 0 0 0 11 0 1335.6095 Q9BTY2 Q9BTY2 34 44 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.00092354 123.11 By MS/MS 6 0 1 1 1248300 1248300 0 4159 2320 4303 9664 7928 7928 1 8581.1 0 FDPVGPLPGPNPILPGR GPGETPSQFPPLRPRFDPVGPLPGPNPILP PVGPLPGPNPILPGRGGPNDRFPFRPSRGR R F D G R G 0 1 1 1 0 0 0 3 0 1 2 0 0 1 6 0 0 0 0 1 0 0 17 0 1741.9515 Q9Y3I1 Q9Y3I1 482 498 FBXO7 F-box only protein 7 yes yes 2 0.028844 77.597 By MS/MS 5 0 1 1 453030 453030 0 4160 2879 4304 9665 7929 7929 0 4543.6 0 FDPVRVDITSK PSGSYVVEVVSPAYRFDPVRVDITSKGKMR PAYRFDPVRVDITSKGKMRARYVNYIKTSE R F D S K G 0 1 0 2 0 0 0 0 0 1 0 1 0 1 1 1 1 0 0 2 0 0 11 1 1275.6823 Q9NPA0 Q9NPA0 105 115 EMC7 ER membrane protein complex subunit 7 yes yes 2 0.032839 99.568 By MS/MS 9 0 1 1 1165700 1165700 0 4161 2529 4305 9666 7930 7930 1 22941 0 FDQLFDDESDPFEVLK PGHLQEGFGCVVTNRFDQLFDDESDPFEVL DQLFDDESDPFEVLKAAENKKKEAGGGGVG R F D L K A 0 0 0 4 0 1 2 0 0 0 2 1 0 3 1 1 0 0 0 1 0 0 16 0 1942.8836 Q8NC51 Q8NC51 17 32 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 2.8202E-33 307.77 By MS/MS 6 0 1 1 6575100 6575100 0 4162 1946 4306 9667 7931;7932;7933 7932 3 45199 0 FDQLLAEEK HQRQSACNLEKKQKKFDQLLAEEKTISAKY EKKQKKFDQLLAEEKTISAKYAEERDRAEA K F D E K T 1 0 0 1 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1091.5499 P35580;P35579;Q7Z406 P35579 1446 1454 MYH10;MYH9;MYH14 Myosin-10;Myosin-9;Myosin-14 no no 2 6.6008E-07 187.5 By MS/MS By matching 2.33 0.471 2 1 2 1 1085100 1016000 69134 4163 824;825;1788 4307 9668;9669;9670 7934 7934 1 314180 97769 FDQPLEASTWLK KNCRDLLQSSYNKQRFDQPLEASTWLKNFK KQRFDQPLEASTWLKNFKTTNERFLNQIKV R F D L K N 1 0 0 1 0 1 1 0 0 0 2 1 0 1 1 1 1 1 0 0 0 0 12 0 1433.7191 P51398 P51398 178 189 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 7.7676E-18 254.07 By MS/MS 7.5 0.5 1 1 2 2713100 2713100 0 4164 993 4308 9671;9672 7935;7936 7935 2 42074 0 FDQSVDPEIIAR KGRTEILKWYLNKIKFDQSVDPEIIARGTV KIKFDQSVDPEIIARGTVGFSGAELENLVN K F D A R G 1 1 0 2 0 1 1 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 12 0 1388.6936 Q96TA2 Q96TA2 525 536 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.0043508 105.46 By MS/MS 6 0.816 1 1 1 3 3465300 3465300 0 4165 2241 4309 9673;9674;9675 7937 7937 1 28992 0 FDSDAASPR RFISVGYVDDTQFVRFDSDAASPRGEPRAP DTQFVRFDSDAASPRGEPRAPWVEQEGPEY R F D P R G 2 1 0 2 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 9 0 964.42502 P01889;P10321 P10321 60 68 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain no no 2 4.7935E-05 171.99 By MS/MS By matching 7 0 2 1 1 2465400 2447600 17850 4166 558;456 4310 9676;9677 7938 7938 1 38423 32148 FDSNNVVLIEDNGNPVGTR LIVGHCMPGPRMTPRFDSNNVVLIEDNGNP NVVLIEDNGNPVGTRIKTPIPTSLRKREGE R F D T R I 0 1 4 2 0 0 1 2 0 1 1 0 0 1 1 1 1 0 0 3 0 0 19 0 2058.997 Q6P1L8 Q6P1L8 100 118 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 6.4297E-18 267.5 By MS/MS 10 0 1 1 794980 794980 0 4167 1699 4311 9678 7939 7939 1 42847 0 FDTGNLCMVTGGANLGR IQIDLETGKITDFIKFDTGNLCMVTGGANL TGNLCMVTGGANLGRIGVITNRERHPGSFD K F D G R I 1 1 2 1 1 0 0 4 0 0 2 0 1 1 0 0 2 0 0 1 0 0 17 0 1781.8189 P62701 P62701 175 191 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 4.7267E-24 273.07 By MS/MS 8 0 1 1 1299300 1299300 0 4168 1165 4312 9679 7940 7940 1 16404 0 FDVQLKDLEK NLTGRLNKCGVISPRFDVQLKDLEKWQNNL VISPRFDVQLKDLEKWQNNLLPSRQFGFIV R F D E K W 0 0 0 2 0 1 1 0 0 0 2 2 0 1 0 0 0 0 0 1 0 0 10 1 1233.6605 P62244 P62244 79 88 RPS15A 40S ribosomal protein S15a yes yes 2;3 3.2001E-10 219.72 By MS/MS 9.5 0.5 2 2 4 11016000 11016000 0 4169 1144 4313 9680;9681;9682;9683 7941;7942 7942 2 585400 0 FDVSGYPTLK LAKVDATAETDLAKRFDVSGYPTLKIFRKG DLAKRFDVSGYPTLKIFRKGRPYDYNGPRE R F D L K I 0 0 0 1 0 0 0 1 0 0 1 1 0 1 1 1 1 0 1 1 0 0 10 0 1125.5706 P13667 P13667 247 256 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.001315 117.53 By MS/MS 5 0 1 1 1529200 1529200 0 4170 604 4314 9684 7943 7943 1 15337 0 FEAPLFNAR VEEADVVLLVGTNPRFEAPLFNARIRKSWL VGTNPRFEAPLFNARIRKSWLHNDLKVALI R F E A R I 2 1 1 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1063.5451 P28331 P28331 409 417 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.0063355 90.601 By MS/MS 5.5 0.5 1 1 2 3090700 3090700 0 4171 753 4315 9685;9686 7944 7944 1 30147 0 FEDENFILK TRHNGTGGKSIYGEKFEDENFILKHTGPGI SIYGEKFEDENFILKHTGPGILSMANAGPN K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 3.3469E-07 195.32 By MS/MS 10 0 1 1 6568100 6568100 0 4172 1188 4316 9687 7945 7945 1 354000 0 FEDPKFEVIEKPQA QMFGNADMNTFPTFKFEDPKFEVIEKPQA_ KFEDPKFEVIEKPQA_______________ K F E Q A - 1 0 0 1 0 1 3 0 0 1 0 2 0 2 2 0 0 0 0 1 0 0 14 2 1675.8457 P18859 P18859 95 108 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2;3 0.00038253 187.62 By MS/MS 10 0 2 2 2187800 2187800 0 4173 657 4317 9688;9689 7946;7947 7947 2 117920 0 FEDSPSYVK ELLTESSKATNVCTRFEDSPSYVKWGKLRD TNVCTRFEDSPSYVKWGKLRDYQVRGLNWL R F E V K W 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 2 0 0 1 1 0 0 9 0 1070.492 O60264 O60264 168 176 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.024046 87.181 By MS/MS 3 0 1 1 618060 618060 0 4174 251 4318 9690 7948 7948 1 11309 0 FEDTLEFVGFDAK SVAASSHVPIQKKLRFEDTLEFVGFDAKMA LRFEDTLEFVGFDAKMAEESSSSSSSSSPT R F E A K M 1 0 0 2 0 0 2 1 0 0 1 1 0 3 0 0 1 0 0 1 0 0 13 0 1516.7086 Q13620 Q13620 121 133 CUL4B Cullin-4B yes yes 2 0.00042564 139.32 By MS/MS 4 0 1 1 86947 86947 0 4175 1405 4319 9691 7949 7949 1 8182.3 0 FEDVVNQSSPK PAPKSTQENNTKQLRFEDVVNQSSPKNCTV KQLRFEDVVNQSSPKNCTVYCGGIASGLTD R F E P K N 0 0 1 1 0 1 1 0 0 0 0 1 0 1 1 2 0 0 0 2 0 0 11 0 1248.5986 Q01085 Q01085 193 203 TIAL1 Nucleolysin TIAR yes yes 2 2.5109E-06 180.19 By MS/MS 7 0 1 1 2233700 2233700 0 4176 1266 4320 9692 7950 7950 1 35066 0 FEEAVIAR KVTAHWHKGTTLMIKFEEAVIARDRALEGR GTTLMIKFEEAVIARDRALEGR________ K F E A R D 2 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 8 0 933.49198 Q8IUR0 Q8IUR0 174 181 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.0027294 136.16 By MS/MS 8.5 0.5 1 1 2 1165500 1165500 0 4177 1859 4321 9693;9694 7951 7951 1 20859 0 FEECRKEIEER IRFLNAENAQKFKTKFEECRKEIEEREKKA FKTKFEECRKEIEEREKKAGSGKNDHAEKV K F E E R E 0 2 0 0 1 0 5 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 11 2 1523.7038 P43487 P43487 155 165 RANBP1 Ran-specific GTPase-activating protein yes yes 3 0.0082846 91.469 By MS/MS 8 0 1 1 898000 898000 0 4178 899 4322 9695 7952 7952 1 11337 0 FEEFQNTLSK QETHLKQQLALYTEKFEEFQNTLSKSSEVF LYTEKFEEFQNTLSKSSEVFTTFKQEMEKM K F E S K S 0 0 1 0 0 1 2 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 10 0 1241.5928 P40222 P40222 394 403 TXLNA Alpha-taxilin yes yes 2 5.0789E-08 197.79 By MS/MS 5 0 1 1 2176100 2176100 0 4179 857 4323 9696 7953 7953 1 21825 0 FEELCSDLFR LFEGIDFYTSITRARFEELCSDLFRSTLEP ITRARFEELCSDLFRSTLEPVEKALRDAKL R F E F R S 0 1 0 1 1 0 2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 10 0 1314.5914 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 302 311 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 8.6622E-10 203.29 By MS/MS 5.75 0.829 2 1 1 4 17609000 17609000 0 4180 550;639 4324 9697;9698;9699;9700 7954;7955;7956 7954 3 171140 0 FEELLLQASK MGLSEAEAIGADSARFEELLLQASKELQQA ADSARFEELLLQASKELQQAQTTRPESTQI R F E S K E 1 0 0 0 0 1 2 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 10 0 1176.639 Q9NWS0 Q9NWS0 24 33 PIH1D1 PIH1 domain-containing protein 1 yes yes 2 0.00041942 134.84 By MS/MS 6.5 1.12 1 1 1 1 4 26103000 26103000 0 4181 2610 4325 9701;9702;9703;9704 7957 7957 1 192520 0 FEELNADLFR LYEGIDFYTSITRARFEELNADLFRGTLDP ITRARFEELNADLFRGTLDPVEKALRDAKL R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 P11142;P54652 P11142 302 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 1.9032E-10 207.83 By MS/MS By MS/MS 5.14 2.1 1 1 2 1 1 1 6 1 33838000 33777000 61309 4182 572 4326 9705;9706;9707;9708;9709;9710;9711 7958;7959;7960;7961;7962;7963;7964;7965;7966;7967 7965 10 366010 51487 FEELNMDLFR FYEGEDFSETLTRAKFEELNMDLFRSTMKP LTRAKFEELNMDLFRSTMKPVQKVLEDSDL K F E F R S 0 1 1 1 0 0 2 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 10 0 1312.6122 P11021 P11021 327 336 HSPA5 78 kDa glucose-regulated protein yes yes 2 4.3874E-05 157.75 By MS/MS 5 0 2 2 711940 711940 0 4183 571 4327;4328 9712;9713 7968;7969 7969 252 2 7140.4 0 FEELTNLIR EEDTKRVVRSAKDKRFEELTNLIRTIRNAM SAKDKRFEELTNLIRTIRNAMKIRDVTKCL R F E I R T 0 1 1 0 0 0 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1133.6081 Q99613;B5ME19 Q99613 57 65 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 2.6504E-07 196.99 By MS/MS 5.18 2.72 1 1 1 2 2 1 1 1 1 11 52477000 52477000 0 4184 2252 4329 9714;9715;9716;9717;9718;9719;9720;9721;9722;9723;9724 7970;7971;7972;7973;7974;7975;7976;7977;7978;7979;7980 7973 11 4094500 0 FEGQFSINK DNSMKIPLNNGAGCRFEGQFSINKVPGNFH NGAGCRFEGQFSINKVPGNFHVSTHSATAQ R F E N K V 0 0 1 0 0 1 1 1 0 1 0 1 0 2 0 1 0 0 0 0 0 0 9 0 1068.524 Q969X5 Q969X5 117 125 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 0.017798 89.886 By MS/MS 8 0 1 1 8185400 8185400 0 4185 2097 4330 9725 7981 7981 1 103340 0 FEHQEWK LEAQAYTAYLSGMLRFEHQEWKAAIEAFNK AYLSGMLRFEHQEWKAAIEAFNKCKTIYEK R F E W K A 0 0 0 0 0 1 2 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 7 0 1002.4559 Q9UHB9 Q9UHB9 199 205 SRP68 Signal recognition particle subunit SRP68 yes yes 3 0.053083 94.407 By MS/MS 5 0 1 1 606990 606990 0 4186 2728 4331 9726 7982 7982 1 6087.8 0 FEIEVLCK LAELHQEHDLKLNLKFEIEVLCKNLALDIN DLKLNLKFEIEVLCKNLALDINELKPGNLL K F E C K N 0 0 0 0 1 0 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 1036.5263 A5YKK6 A5YKK6 1281 1288 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.022839 96.492 By MS/MS 2.5 0.5 1 1 2 419880 419880 0 4187 19 4332 9727;9728 7983 7983 1 104210 0 FEINLISPDTK SDSEKNRTMLFQVGRFEINLISPDTKSVVL QVGRFEINLISPDTKSVVLEKNFKDISSCS R F E T K S 0 0 1 1 0 0 1 0 0 2 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1275.6711 O60343 O60343 364 374 TBC1D4 TBC1 domain family member 4 yes yes 2 1.9738E-05 172.8 By MS/MS 3 0 1 1 82407 82407 0 4188 256 4333 9729 7984 7984 1 1507.8 0 FEIWDTAGQER AFLTQTVCLDDTTVKFEIWDTAGQERYHSL TTVKFEIWDTAGQERYHSLAPMYYRGAQAA K F E E R Y 1 1 0 1 0 1 2 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 11 0 1350.6204 P51148;P61020;P20339 P51148 72 82 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 2 8.7749E-05 158.47 By MS/MS 8.5 0.5 1 1 2 1222500 1222500 0 4189 989;669 4334 9730;9731 7985;7986 7985 2 19486 0 FEKPLEEK IIDRRPERRPPRERRFEKPLEEKGEGGEFS RPPRERRFEKPLEEKGEGGEFSVDRPIIDR R F E E K G 0 0 0 0 0 0 3 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 8 1 1018.5335 Q8NC51 Q8NC51 138 145 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.0098007 120.87 By MS/MS By matching 6 0 4 2 2 4405600 4310000 95573 4190 1946 4335 9732;9733;9734;9735 7987;7988 7988 2 29628 97935 FELGKLMELHGEGSSSGK HDVFVRKVKMLKKPKFELGKLMELHGEGSS GKLMELHGEGSSSGKATGDETGAKVERADG K F E G K A 0 0 0 0 0 0 3 4 1 0 3 2 1 1 0 3 0 0 0 0 0 0 18 1 1904.9302 P61247 P61247 223 240 RPS3A 40S ribosomal protein S3a yes yes 3 0.051182 61.495 By MS/MS 8 0 1 1 1204900 1204900 0 4191 1118 4336 9736 7989 7989 634 1 15212 0 FELQDSGSSLLPK LGHEGKMAVEGVLKRFELQDSGSSLLPKEI KRFELQDSGSSLLPKEIVKVEKMMENHVSQ R F E P K E 0 0 0 1 0 1 1 1 0 0 3 1 0 1 1 3 0 0 0 0 0 0 13 0 1419.7246 A3KMH1 A3KMH1 362 374 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.01051 112.13 By MS/MS 2 0 1 1 0 0 0 4192 14 4337 9737 7990 7990 1 0 0 FELQHGTEEQQEEVR KIDSDLGDAWAFFYKFELQHGTEEQQEEVR FELQHGTEEQQEEVRKRCESAEPRHGELWC K F E V R K 0 1 0 0 0 3 5 1 1 0 1 0 0 1 0 0 1 0 0 1 0 0 15 0 1857.8493 O94906 O94906 884 898 PRPF6 Pre-mRNA-processing factor 6 yes yes 3 0.00059456 129.17 By MS/MS 4 0 1 1 661310 661310 0 4193 376 4338 9738 7991 7991 1 62234 0 FELSGIPPAPR EGERAMTKDNNLLGRFELSGIPPAPRGVPQ LLGRFELSGIPPAPRGVPQIEVTFDIDANG R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 3 1 0 0 0 0 0 0 11 0 1182.6397 P0DMV9;P0DMV8;P17066 P0DMV9 459 469 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2 0.0013302 128.28 By MS/MS 5 0 1 1 754080 754080 0 4194 550;639 4339 9739 7992 7992 1 7563 0 FELTGIPPAPR EGERAMTKDNNLLGKFELTGIPPAPRGVPQ LLGKFELTGIPPAPRGVPQIEVTFDIDANG K F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 3 0 1 0 0 0 0 0 11 0 1196.6554 P11142 P11142 459 469 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.0018999 112.11 By MS/MS 5 0 2 2 1376500 1376500 0 4195 572 4340 9740;9741 7993;7994 7993 2 13805 0 FEMEQNLR DIDNTRMTLDDFRIKFEMEQNLRQGVDADI LDDFRIKFEMEQNLRQGVDADINGLRQVLD K F E L R Q 0 1 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1065.4913 P35527;CON__P35527 P35527 243 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00065325 166.68 By MS/MS By MS/MS 4.72 2.75 3 4 3 3 3 2 2 1 3 1 9 16 8442300 4937500 3504700 + 4196 822 4341;4342 9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754;9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765;9766 7995;7996;7997;7998;7999;8000;8001;8002;8003;8004;8005;8006;8007;8008;8009;8010;8011 8006 404 17 508820 2434500 FETFCLDPSLVTK TSSSQVKDNKPLVERFETFCLDPSLVTKQA ERFETFCLDPSLVTKQANLVHFPPGFQPIP R F E T K Q 0 0 0 1 1 0 1 0 0 0 2 1 0 2 1 1 2 0 0 1 0 0 13 0 1555.7592 Q9UHB9 Q9UHB9 558 570 SRP68 Signal recognition particle subunit SRP68 yes yes 2 9.8306E-08 213.35 By MS/MS 5 0 2 2 8144400 8144400 0 4197 2728 4343 9767;9768 8012;8013 8012 2 81684 0 FFADDTQAALTK SNLYNNIRLFEKGMKFFADDTQAALTKHLL GMKFFADDTQAALTKHLLKSVCTDITNLIF K F F T K H 3 0 0 2 0 1 0 0 0 0 1 1 0 2 0 0 2 0 0 0 0 0 12 0 1326.6456 O94874 O94874 560 571 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00036447 139.76 By MS/MS 4 0 1 1 12142000 12142000 0 4198 372 4344 9769 8014 8014 1 1142600 0 FFDANYDGKDYDPVAAR GKFQDNFEFVQWFKKFFDANYDGKDYDPVA DANYDGKDYDPVAARQGQETAVAPSLVAPA K F F A R Q 3 1 1 4 0 0 0 1 0 0 0 1 0 2 1 0 0 0 2 1 0 0 17 1 1962.8748 Q15691 Q15691 114 130 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 3 0.00045187 122.63 By MS/MS 8 0 1 1 1329200 1329200 0 4199 1524 4345 9770 8015 8015 1 16781 0 FFDDDLLVSTSR MPASVLTGNVIIETKFFDDDLLVSTSRVRL ETKFFDDDLLVSTSRVRLFYV_________ K F F S R V 0 1 0 3 0 0 0 0 0 0 2 0 0 2 0 2 1 0 0 1 0 0 12 0 1413.6776 O43924 O43924 133 144 PDE6D Retinal rod rhodopsin-sensitive cGMP 3,5-cyclic phosphodiesterase subunit delta yes yes 2 0.00073192 143.24 By MS/MS 10 0 1 1 192660 192660 0 4200 246 4346 9771 8016 8016 1 10384 0 FFDDPMLLELAK TRRRKGLSEDVSISKFFDDPMLLELAKQDV ISKFFDDPMLLELAKQDVVLNYPM______ K F F A K Q 1 0 0 2 0 0 1 0 0 0 3 1 1 2 1 0 0 0 0 0 0 0 12 0 1437.7214 Q15029 Q15029 952 963 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.043313 72.096 By MS/MS 4 0 1 1 118830 118830 0 4201 1476 4347 9772 8017 8017 864 1 11182 0 FFDEESYSLLR SLDHKSAHAGTYEVRFFDEESYSLLRKAQR YEVRFFDEESYSLLRKAQRNNEDISIIPPL R F F L R K 0 1 0 1 0 0 2 0 0 0 2 0 0 2 0 2 0 0 1 0 0 0 11 0 1404.6561 P51571 P51571 106 116 SSR4 Translocon-associated protein subunit delta yes yes 2 4.8708E-13 230.06 By MS/MS 9.5 0.5 1 1 2 11068000 11068000 0 4202 998 4348 9773;9774 8018;8019 8018 2 390570 0 FFDEESYSLLRK SLDHKSAHAGTYEVRFFDEESYSLLRKAQR EVRFFDEESYSLLRKAQRNNEDISIIPPLF R F F R K A 0 1 0 1 0 0 2 0 0 0 2 1 0 2 0 2 0 0 1 0 0 0 12 1 1532.7511 P51571 P51571 106 117 SSR4 Translocon-associated protein subunit delta yes yes 2;3 2.4081E-13 208.63 By MS/MS 9.5 0.5 2 2 4 4224300 4224300 0 4203 998 4349 9775;9776;9777;9778 8020;8021;8022;8023 8021 3 134060 0 FFDKVIEKR RYLAAGSSNAVKLSRFFDKVIEKRYFLREG AVKLSRFFDKVIEKRYFLREGNQIPGFPDR R F F K R Y 0 1 0 1 0 0 1 0 0 1 0 2 0 2 0 0 0 0 0 1 0 0 9 2 1180.6604 Q5HYI8 Q5HYI8 199 207 RABL3 Rab-like protein 3 yes yes 3 0.001164 129.38 By MS/MS 8 0 1 1 1573300 1573300 0 4204 1601 4350 9779 8024 8024 1 19862 0 FFDTNTSVLMK VIGCLDLILKWLTLRFFDTNTSVLMKALEY LTLRFFDTNTSVLMKALEYLKLLFTLLSEE R F F M K A 0 0 1 1 0 0 0 0 0 0 1 1 1 2 0 1 2 0 0 1 0 0 11 0 1301.6326 Q14008 Q14008 1253 1263 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.2808E-05 160.53 By MS/MS 2.5 0.5 1 1 2 403320 403320 0 4205 1417 4351 9780;9781 8025 8025 808 1 124020 0 FFEDYGLFMR FFIDQSKKDAEKYAKFFEDYGLFMREGIVT EKYAKFFEDYGLFMREGIVTATEQEVKEDI K F F M R E 0 1 0 1 0 0 1 1 0 0 1 0 1 3 0 0 0 0 1 0 0 0 10 0 1323.5958 Q12931 Q12931 440 449 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 3.0426E-06 178.94 By MS/MS 5.33 0.471 2 1 3 1442900 1442900 0 4206 1340 4352;4353 9782;9783;9784 8026;8027 8026 785 2 14191 0 FFEFGSLEQK YQLMVDVFGNYVIQKFFEFGSLEQKLALAE YVIQKFFEFGSLEQKLALAERIRGHVLSLA K F F Q K L 0 0 0 0 0 1 2 1 0 0 1 1 0 3 0 1 0 0 0 0 0 0 10 0 1230.5921 Q14671 Q14671 905 914 PUM1 Pumilio homolog 1 yes yes 2 0.00035659 148.69 By MS/MS 4 0.816 1 1 1 3 486590 486590 0 4207 1448 4354 9785;9786;9787 8028 8028 1 27747 0 FFENYNQSLEK LALLSAVSASIKDEKFFENYNQSLEKWSLS KDEKFFENYNQSLEKWSLSQAVTGLIDTGR K F F E K W 0 0 2 0 0 1 2 0 0 0 1 1 0 2 0 1 0 0 1 0 0 0 11 0 1417.6514 Q6PGP7 Q6PGP7 1316 1326 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 2.9893E-10 224.58 By MS/MS 3 0 1 1 585180 585180 0 4208 1716 4355 9788 8029 8029 1 10707 0 FFGEDAEIAAR HKDAVLCVECGYKYRFFGEDAEIAARELNI YKYRFFGEDAEIAARELNIYCHLDHNFMTA R F F A R E 3 1 0 1 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1224.5775 P20585 P20585 258 268 MSH3 DNA mismatch repair protein Msh3 yes yes 2 0.0026297 119.75 By MS/MS 3 0 1 1 264930 264930 0 4209 671 4356 9789 8030 8030 0 4847.4 0 FFGGYVPEMVLTPDDQR NLGNFINRAGMFVSKFFGGYVPEMVLTPDD GGYVPEMVLTPDDQRLLAHVTLELQHYHQL K F F Q R L 0 1 0 2 0 1 1 2 0 0 1 0 1 2 2 0 1 0 1 2 0 0 17 0 1969.9244 P56192 P56192 664 680 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.00057905 126.1 By MS/MS 4 0 2 2 583020 583020 0 4210 1067 4357;4358 9790;9791 8031;8032;8033 8032 598 3 54866 0 FFHETEAPR EETIKVWKQRTHVMRFFHETEAPRPKDFLS RTHVMRFFHETEAPRPKDFLSKFYVGHDP_ R F F P R P 1 1 0 0 0 0 2 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 9 0 1132.5302 P56556 P56556 106 114 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 3 0.010751 93.649 By MS/MS 10 0 1 1 168880 168880 0 4211 1074 4359 9792 8034 8034 1 9102.3 0 FFHETEAPRPK EETIKVWKQRTHVMRFFHETEAPRPKDFLS HVMRFFHETEAPRPKDFLSKFYVGHDP___ R F F P K D 1 1 0 0 0 0 2 0 1 0 0 1 0 2 2 0 1 0 0 0 0 0 11 1 1357.6779 P56556 P56556 106 116 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 2;3;4 0.0060011 117.31 By MS/MS 10 0 3 3 2009500 2009500 0 4212 1074 4360 9793;9794;9795 8035;8036;8037 8037 3 108300 0 FFLAPCVEPGR EEFQLLHIFRRDALRFFLAPCVEPGRAGTF DALRFFLAPCVEPGRAGTFVFTVPAMQEYL R F F G R A 1 1 0 0 1 0 1 1 0 0 1 0 0 2 2 0 0 0 0 1 0 0 11 0 1291.6383 Q86UT6 Q86UT6 476 486 NLRX1 NLR family member X1 yes yes 2 0.001265 116.3 By MS/MS 4.5 0.5 1 1 2 2712100 2712100 0 4213 1825 4361 9796;9797 8038;8039 8038 2 224250 0 FFLGDLCSR NVFDIQQGFDNPQVRFFLGDLCSRQDLYPA DNPQVRFFLGDLCSRQDLYPALKGVNTVFH R F F S R Q 0 1 0 1 1 0 0 1 0 0 2 0 0 2 0 1 0 0 0 0 0 0 9 0 1113.5277 Q15738 Q15738 80 88 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.0073486 105.1 By MS/MS 8 0.816 1 1 1 3 5157900 5157900 0 4214 1526 4362 9798;9799;9800 8040;8041 8040 2 80915 0 FFLSSGLIDK VESFMATAPFVQIGRFFLSSGLIDKVDNFK VQIGRFFLSSGLIDKVDNFKSLSLSKLEDP R F F D K V 0 0 0 1 0 0 0 1 0 1 2 1 0 2 0 2 0 0 0 0 0 0 10 0 1125.607 Q9BTV4 Q9BTV4 190 199 TMEM43 Transmembrane protein 43 yes yes 2 0.0092084 100.02 By MS/MS 7.5 0.5 1 1 2 951460 951460 0 4215 2318 4363 9801;9802 8042 8042 1 14594 0 FFQEENTEK DYIRTQIISKKINTKFFQEENTEKLKLKYY KKINTKFFQEENTEKLKLKYYNLMIQLDQH K F F E K L 0 0 1 0 0 1 3 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 9 0 1170.5193 O00232 O00232 213 221 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 7.9161E-05 166.09 By MS/MS By matching 6 0 2 1 1 3805200 3763700 41444 4216 94 4364 9803;9804 8043;8044 8044 2 25873 42469 FFQEENTEKLK DYIRTQIISKKINTKFFQEENTEKLKLKYY INTKFFQEENTEKLKLKYYNLMIQLDQHEG K F F L K L 0 0 1 0 0 1 3 0 0 0 1 2 0 2 0 0 1 0 0 0 0 0 11 1 1411.6983 O00232 O00232 213 223 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2;3 1.6541E-08 211.64 By MS/MS 6 0 2 2 9843300 9843300 0 4217 94 4365 9805;9806 8045;8046 8045 2 67665 0 FFQELPGSDPVFK ILVEDELSSPVVVFRFFQELPGSDPVFKAV FRFFQELPGSDPVFKAVPVPNMTPSGVGRE R F F F K A 0 0 0 1 0 1 1 1 0 0 1 1 0 3 2 1 0 0 0 1 0 0 13 0 1509.7504 Q6P996;Q6P474 Q6P996 394 406 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 2 0.0010963 124.39 By MS/MS 5 0.816 1 1 1 3 3031100 3031100 0 4218 1715 4366 9807;9808;9809 8047;8048 8047 2 187030 0 FFQELSK FLEEIQIKEPAEKQKFFQELSKSLDAFPED KEPAEKQKFFQELSKSLDAFPEDFCRHKVL K F F S K S 0 0 0 0 0 1 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 7 0 897.45962 Q96KG9 Q96KG9 293 299 SCYL1 N-terminal kinase-like protein yes yes 2 0.02658 107.29 By MS/MS 4 0 1 1 1155500 1155500 0 4219 2188 4367 9810 8049 8049 1 108740 0 FFSASCVPGADK NWTGPPEPIEAAVARFFSASCVPGADKGQF VARFFSASCVPGADKGQFPNLCRLCAGTGE R F F D K G 2 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 1 0 0 12 0 1284.5809 P02788 P02788 171 182 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.0038038 126.39 By MS/MS 1 0 1 1 137600 0 137600 4220 459 4368 9811 8050 8050 1 0 137600 FFSEQQQSK MKAKQRAEVLQSTQRFFSEQQQSKQIGGGK LQSTQRFFSEQQQSKQIGGGKAQKVDSDSS R F F S K Q 0 0 0 0 0 3 1 0 0 0 0 1 0 2 0 2 0 0 0 0 0 0 9 0 1127.5247 Q9Y520 Q9Y520 2824 2832 PRRC2C Protein PRRC2C yes yes 2 0.00010468 161.27 By MS/MS 2 0.816 1 1 1 3 752880 752880 0 4221 2905 4369 9812;9813;9814 8051;8052;8053;8054 8052 4 167220 0 FFTTGSDSESESSLSGEELVTKPVGGNYGK ______________________________ GEELVTKPVGGNYGKQPLLLSEDEEDTKRV R F F G K Q 0 0 1 1 0 0 4 5 0 0 2 2 0 2 1 6 3 0 1 2 0 0 30 1 3108.4411 Q99613;B5ME19 Q99613 4 33 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 2.0678E-10 115.5 By MS/MS 4 0 1 1 739610 739610 0 4222 2252 4370 9815 8055 8055 1 69603 0 FFVADTANEALEAAK QSKKLMSDNGVRVQRFFVADTANEALEAAK FFVADTANEALEAAKRLNAKEIVLKAQILA R F F A K R 5 0 1 1 0 0 2 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 15 0 1595.7831 Q96I99 Q96I99 59 73 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 3.9105E-11 273.24 By MS/MS 7 0 1 1 694480 694480 0 4223 2172 4371 9816 8056 8056 1 10902 0 FFVMTSLR LTATVLKQGSNQAIRFFVMTSLRNWYRGDN GSNQAIRFFVMTSLRNWYRGDNPNKPMNPL R F F L R N 0 1 0 0 0 0 0 0 0 0 1 0 1 2 0 1 1 0 0 1 0 0 8 0 999.52117 P53007 P53007 199 206 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0010433 152.47 By MS/MS 8.33 0.471 2 1 3 2501600 2501600 0 4224 1026 4372;4373 9817;9818;9819 8057;8058 8058 561 2 32145 0 FFVSSSQGR TDSEDKALMNGSESRFFVSSSQGRSELHIE NGSESRFFVSSSQGRSELHIENLNMEADPG R F F G R S 0 1 0 0 0 1 0 1 0 0 0 0 0 2 0 3 0 0 0 1 0 0 9 0 1013.493 P35613 P35613 274 282 BSG Basigin yes yes 2 0.0016116 126.24 By MS/MS By matching 7.17 1.07 2 2 1 1 4 2 10613000 10530000 82560 4225 828 4374 9820;9821;9822;9823;9824;9825 8059;8060;8061 8059 3 131370 108410 FGAGTLK LREGNQIPGFPDRKRFGAGTLKSLHYD___ PGFPDRKRFGAGTLKSLHYD__________ R F G L K S 1 0 0 0 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 7 0 692.38573 Q5HYI8 Q5HYI8 225 231 RABL3 Rab-like protein 3 yes yes 2 0.03081 104.11 By MS/MS 7 0 1 1 887950 887950 0 4226 1601 4375 9826 8062 8062 1 13939 0 FGAPPHAGGGIGLER GIDLEKIKAYIDSFRFGAPPHAGGGIGLER FGAPPHAGGGIGLERVTMLFLGLHNVRQTS R F G E R V 2 1 0 0 0 0 1 5 1 1 1 0 0 1 2 0 0 0 0 0 0 0 15 0 1434.7368 P14868 P14868 461 475 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.048899 97.86 By MS/MS 6 0 1 1 6595600 6595600 0 4227 620 4376 9827 8063 8063 1 45340 0 FGAVEGAVAK TEALASFDYIVREGKFGAVEGAVAKYMGAA VREGKFGAVEGAVAKYMGAAAMYLISKRLK K F G A K Y 3 0 0 0 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 2 0 0 10 0 947.50763 Q9H7Z7 Q9H7Z7 270 279 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 2 0.054298 70.256 By MS/MS 8 0 1 1 463880 463880 0 4228 2469 4377 9828 8064 8064 1 5856.5 0 FGDDVVLVGGK TVPFTVESLLESSYKFGDDVVLVGGKSLTT SSYKFGDDVVLVGGKSLTTYGLSAYSGKVR K F G G K S 0 0 0 2 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 3 0 0 11 0 1104.5815 Q9NZJ5 Q9NZJ5 188 198 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes yes 2 0.0052503 103.26 By MS/MS 3 0 1 1 241220 241220 0 4229 2650 4378 9829 8065 8065 1 4413.6 0 FGDLDEQEFVYK RMFGTYFRVGFYGTKFGDLDEQEFVYKEPA GTKFGDLDEQEFVYKEPAITKLAEISHRLE K F G Y K E 0 0 0 2 0 1 2 1 0 0 1 1 0 2 0 0 0 0 1 1 0 0 12 0 1488.6773 Q96N67 Q96N67 1852 1863 DOCK7 Dedicator of cytokinesis protein 7 no no 2 2.2216E-06 196.44 By MS/MS 2 0 1 1 252350 252350 0 4230 2201 4379 9830 8066 8066 1 85356 0 FGDLDEQEFVYKEPAITK RMFGTYFRVGFYGTKFGDLDEQEFVYKEPA LDEQEFVYKEPAITKLAEISHRLEGFYGER K F G T K L 1 0 0 2 0 1 3 1 0 1 1 2 0 2 1 0 1 0 1 1 0 0 18 1 2128.0365 Q96N67 Q96N67 1852 1869 DOCK7 Dedicator of cytokinesis protein 7 no no 3 0.00026677 124.04 By MS/MS 2 0 1 1 577940 577940 0 4231 2201 4380 9831 8067 8067 1 195480 0 FGDLILK SELQLPFQACLKVEKFGDLILKATEPQMVL QACLKVEKFGDLILKATEPQMVLFNLYDDW K F G L K A 0 0 0 1 0 0 0 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 804.47454 Q6P2Q9 Q6P2Q9 1902 1908 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.014248 124.37 By MS/MS 3 1.41 1 1 1 1 1 5 2758700 2758700 0 4232 1708 4381 9832;9833;9834;9835;9836 8068;8069;8070 8069 3 671130 0 FGDPECQVILPLLK MLTKNGPKVLEFNCRFGDPECQVILPLLKS RFGDPECQVILPLLKSDLYEVIQSTLDGLL R F G L K S 0 0 0 1 1 1 1 1 0 1 3 1 0 1 2 0 0 0 0 1 0 0 14 0 1627.8644 P22102 P22102 293 306 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00045175 147.58 By MS/MS 5 1 1 1 2 710580 710580 0 4233 688 4382 9837;9838 8071;8072;8073;8074 8072 4 34111 0 FGDPVVQSDMK PQNTVFDAKRLIGRKFGDPVVQSDMKHWPF IGRKFGDPVVQSDMKHWPFQVINDGDKPKV K F G M K H 0 0 0 2 0 1 0 1 0 0 0 1 1 1 1 1 0 0 0 2 0 0 11 0 1221.57 P0DMV9;P0DMV8 P0DMV9 78 88 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.013887 88.596 By MS/MS 5 0 1 1 204320 204320 0 4234 550 4383 9839 8075 8075 241 1 2049.2 0 FGDSNTVMR LYDAKRRQDSLESMKFGDSNTVMRFLNEQK SLESMKFGDSNTVMRFLNEQKNLHSEISGK K F G M R F 0 1 1 1 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 9 0 1025.46 P15924 P15924 917 925 DSP Desmoplakin yes yes 2 2.7317E-05 180.87 By MS/MS By MS/MS 3.25 2.73 2 2 2 1 1 3 5 2035600 807390 1228200 4235 628 4384;4385 9840;9841;9842;9843;9844;9845;9846;9847 8076;8077;8078;8079;8080;8081 8076 301 6 159250 494370 FGEALKK WFQTECAQAYKAMNKFGEALKKCHEIERHF QAYKAMNKFGEALKKCHEIERHFIEITDDQ K F G K K C 1 0 0 0 0 0 1 1 0 0 1 2 0 1 0 0 0 0 0 0 0 0 7 1 791.45414 Q9BXJ9 Q9BXJ9 501 507 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.048746 124.37 By MS/MS 4.5 0.5 1 1 2 1092200 1092200 0 4236 2357 4386 9848;9849 8082 8082 1 65773 0 FGEDVVEVIK LAEISHRLEGFYGERFGEDVVEVIKDSNPV FYGERFGEDVVEVIKDSNPVDKCKLDPNKA R F G I K D 0 0 0 1 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 3 0 0 10 0 1133.5968 Q96N67 Q96N67 1885 1894 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.2791E-05 166.09 By MS/MS 2 0 1 1 1272800 1272800 0 4237 2201 4387 9850 8083 8083 1 430520 0 FGEDVVEVIKDSNPVDK LAEISHRLEGFYGERFGEDVVEVIKDSNPV EDVVEVIKDSNPVDKCKLDPNKAYIQITYV R F G D K C 0 0 1 3 0 0 2 1 0 1 0 2 0 1 1 1 0 0 0 4 0 0 17 1 1888.9418 Q96N67 Q96N67 1885 1901 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.0037061 96.773 By MS/MS 2 0 1 1 180270 180270 0 4238 2201 4388 9851 8084 8084 1 60973 0 FGELGGFAAIQAK FQKEPHGWVVDLVNKFGELGGFAAIQAKLH NKFGELGGFAAIQAKLHSEDIELGAVSALI K F G A K L 3 0 0 0 0 1 1 3 0 1 1 1 0 2 0 0 0 0 0 0 0 0 13 0 1307.6874 Q9UPU5 Q9UPU5 288 300 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0010054 126.03 By MS/MS 2 0 1 1 69710 69710 0 4239 2802 4389 9852 8085 8085 1 23579 0 FGELVMTK IEQGSDAGYLCESQKFGELVMTKESKALMG YLCESQKFGELVMTKESKALMGLYHGQVLC K F G T K E 0 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 1 0 0 8 0 923.47864 P40939 P40939 327 334 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0026631 136.8 By MS/MS 5 0 1 1 1176700 1176700 0 4240 865 4390 9853 8086 8086 1 11801 0 FGEMQLDFR PTLLNCLMYKMSYYRFGEMQLDFRTPPGFD KMSYYRFGEMQLDFRTPPGFDRTRNAEIGN R F G F R T 0 1 0 1 0 1 1 1 0 0 1 0 1 2 0 0 0 0 0 0 0 0 9 0 1141.5226 Q8TCJ2 Q8TCJ2 725 733 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.0048784 109.44 By MS/MS 2 0 1 1 96418 96418 0 4241 1991 4391 9854 8087 8087 1 32613 0 FGEPVLAGFAR VAIEASNGASDYGNKFGEPVLAGFARSLGL YGNKFGEPVLAGFARSLGLQLPDGQRREWI K F G A R S 2 1 0 0 0 0 1 2 0 0 1 0 0 2 1 0 0 0 0 1 0 0 11 0 1162.6135 O15067 O15067 396 406 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.0029661 109.29 By MS/MS 3 0 1 1 77712 77712 0 4242 157 4392 9855 8088;8089 8088 2 1421.9 0 FGEVVDCTIKTDPVTGR SWDTSKKDLTEYLSRFGEVVDCTIKTDPVT EVVDCTIKTDPVTGRSRGFGFVLFKDAASV R F G G R S 0 1 0 2 1 0 1 2 0 1 0 1 0 1 1 0 3 0 0 3 0 0 17 1 1892.9302 O14979 O14979 171 187 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2;3 0.0027541 157.09 By MS/MS 7 0 2 2 4523200 4523200 0 4243 152 4393 9856;9857 8090;8091 8091 2 71006 0 FGEVVDCTLK SWDTTKKDLKDYFSKFGEVVDCTLKLDPIT DYFSKFGEVVDCTLKLDPITGRSRGFGFVL K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 Q14103 Q14103 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 0.0021026 112.11 By MS/MS 7 0 2 2 7655000 7655000 0 4244 1419 4394 9858;9859 8092;8093 8093 2 120170 0 FGFAESIANQR KALENDQKVRKEGGKFGFAESIANQRITAF EGGKFGFAESIANQRITAFKMEKAPIDTSD K F G Q R I 2 1 1 0 0 1 1 1 0 1 0 0 0 2 0 1 0 0 0 0 0 0 11 0 1238.6044 Q06265 Q06265 282 292 EXOSC9 Exosome complex component RRP45 yes yes 2 1.651E-05 167.12 By MS/MS 5 0 1 1 889960 889960 0 4245 1296 4395 9860 8094 8094 1 8925.8 0 FGFDWESGR CIKSLPSVLVIHLMRFGFDWESGRSIKYDE VIHLMRFGFDWESGRSIKYDEQIRFPWMLN R F G G R S 0 1 0 1 0 0 1 2 0 0 0 0 0 2 0 1 0 1 0 0 0 0 9 0 1099.4723 Q9UPU5 Q9UPU5 1888 1896 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.021746 88.177 By MS/MS 2 0 1 1 105910 105910 0 4246 2802 4396 9861 8095 8095 1 35823 0 FGFGFGGTGK GWSTMQASLDLGTDKFGFGFGGTGKKSHNK LGTDKFGFGFGGTGKKSHNKQFDNYGEEFT K F G G K K 0 0 0 0 0 0 0 5 0 0 0 1 0 3 0 0 1 0 0 0 0 0 10 0 973.46577 Q92499 Q92499 163 172 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.0067515 101.64 By MS/MS 4.5 0.5 1 1 2 1085500 1085500 0 4247 2046 4397 9862;9863 8096;8097 8097 2 44691 0 FGFPEGSVELYAEK KGRRIRELTAVVQKRFGFPEGSVELYAEKV RFGFPEGSVELYAEKVATRGLCAIAQAESL R F G E K V 1 0 0 0 0 0 3 2 0 0 1 1 0 2 1 1 0 0 1 1 0 0 14 0 1571.7508 P23396 P23396 77 90 RPS3 40S ribosomal protein S3 yes yes 2 0.0004824 155.47 By MS/MS 8 0 1 1 1820200 1820200 0 4248 703 4398 9864 8098 8098 1 22980 0 FGFYEVFK WAPTFLGYSMQGLCKFGFYEVFKVLYSNML SMQGLCKFGFYEVFKVLYSNMLGEENTYLW K F G F K V 0 0 0 0 0 0 1 1 0 0 0 1 0 3 0 0 0 0 1 1 0 0 8 0 1035.5066 Q00325 Q00325 138 145 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.018199 101.64 By MS/MS 5.33 3.09 1 1 1 3 1514200 1514200 0 4249 1259 4399 9865;9866;9867 8099;8100 8100 2 49313 0 FGGALDAAAK LVSSLTSGLLTIGDRFGGALDAAAKMFSKA TIGDRFGGALDAAAKMFSKAFDSGIIPMEF R F G A K M 4 0 0 1 0 0 0 2 0 0 1 1 0 1 0 0 0 0 0 0 0 0 10 0 919.47633 P53396 P53396 935 944 ACLY ATP-citrate synthase yes yes 2 0.00028316 141.48 By MS/MS 4.5 0.5 1 1 2 9776000 9776000 0 4250 1030 4400 9868;9869 8101 8101 1 889180 0 FGGGNPELLTQMVSK AKHVAEDLGKVFGERFGGGNPELLTQMVSK FGGGNPELLTQMVSKGFLGRKSGKGFYIYQ R F G S K G 0 0 1 0 0 1 1 3 0 0 2 1 1 1 1 1 1 0 0 1 0 0 15 0 1576.7919 P40939 P40939 611 625 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 1.1901E-32 293.76 By MS/MS 6.67 1.49 2 1 1 1 1 6 10754000 10754000 0 4251 865 4401;4402 9870;9871;9872;9873;9874;9875 8102;8103;8104 8102 448 3 108370 0 FGGGQAK FQKLENDQIESLRQRFGGGQAKTSPKPAVV QIESLRQRFGGGQAKTSPKPAVVETVTTAK R F G A K T 1 0 0 0 0 1 0 3 0 0 0 1 0 1 0 0 0 0 0 0 0 0 7 0 663.33402 P56192 P56192 817 823 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.03591 100.27 By MS/MS By matching 4 0 2 1 1 1187900 1177700 10170 4252 1067 4403 9876;9877 8105 8105 1 110830 21668 FGGLAAGEDNGQR KVLQHEKQVYDIAAKFGGLAAGEDNGQRGY AKFGGLAAGEDNGQRGYLLTYVIAYIRDLA K F G Q R G 2 1 1 1 0 1 1 4 0 0 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1290.5953 O00116 O00116 491 503 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.00092287 127.51 By MS/MS 5 0 1 1 2206200 2206200 0 4253 80 4404 9878 8106 8106 1 22127 0 FGGLVLSPVGK LARLGLVRCLRLGHRFGGLVLSPVGKQYAS LGHRFGGLVLSPVGKQYASPADRQLVAQSG R F G G K Q 0 0 0 0 0 0 0 3 0 0 2 1 0 1 1 1 0 0 0 2 0 0 11 0 1072.6281 Q9UJK0 Q9UJK0 93 103 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 2 0.00091134 123.35 By MS/MS 7 0 1 1 360190 360190 0 4254 2747 4405 9879 8107 8107 1 5654.3 0 FGGNPGGFGNQGGFGNSR EPKHNSNRQLERSGRFGGNPGGFGNQGGFG NPGGFGNQGGFGNSRGGGAGLGNNQGSNMG R F G S R G 0 1 3 0 0 1 0 8 0 0 0 0 0 3 1 1 0 0 0 0 0 0 18 0 1725.7608 Q13148 Q13148 276 293 TARDBP TAR DNA-binding protein 43 yes yes 2 9.1739E-17 250.05 By MS/MS 7 0 1 1 4982100 4982100 0 4255 1358 4406 9880 8108 8108 1 78210 0 FGGPGAR RTLLVADPRRCESKKFGGPGARARYQKSYR PRRCESKKFGGPGARARYQKSYR_______ K F G A R A 1 1 0 0 0 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 7 0 660.33436 P62249 P62249 132 138 RPS16 40S ribosomal protein S16 yes yes 2 0.048105 91.093 By MS/MS By matching 10 0 2 1 1 20375000 20207000 167980 4256 1145 4407 9881;9882 8109 8109 1 1089100 215070 FGGSGSQVDSAR KVPDDIYKTHLENNRFGGSGSQVDSARMNL NNRFGGSGSQVDSARMNLASSFVNGFVNAA R F G A R M 1 1 0 1 0 1 0 3 0 0 0 0 0 1 0 3 0 0 0 1 0 0 12 0 1166.5316 Q13200 Q13200 358 369 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 1.4571E-12 234.9 By MS/MS 5 0.816 1 1 1 3 10460000 10460000 0 4257 1365 4408 9883;9884;9885 8110;8111 8110 2 794480 0 FGHGSAK WEQDQIAHMKNYIARFGHGSAKLARQAQSK HMKNYIARFGHGSAKLARQAQSKEKTLQKM R F G A K L 1 0 0 0 0 0 0 2 1 0 0 1 0 1 0 1 0 0 0 0 0 0 7 0 702.34492 Q9UG63 Q9UG63 345 351 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.054827 88.643 By MS/MS 5 0 1 1 987300 987300 0 4258 2719 4409 9886 8112 8112 1 9902.1 0 FGIQAQMVTTDFQK AMKGKNCVAIAADRRFGIQAQMVTTDFQKI RFGIQAQMVTTDFQKIFPMGDRLYIGLAGL R F G Q K I 1 0 0 1 0 3 0 1 0 1 0 1 1 2 0 0 2 0 0 1 0 0 14 0 1612.7919 P49720 P49720 28 41 PSMB3 Proteasome subunit beta type-3 yes yes 2 1.3902E-05 198.97 By MS/MS 9 0 1 1 632060 632060 0 4259 956 4410 9887 8113 8113 526 1 12439 0 FGISEPGNQEK TKEGFSIPVSADGFKFGISEPGNQEKKSEK DGFKFGISEPGNQEKKSEKPLENGTGFQAQ K F G E K K 0 0 1 0 0 1 2 2 0 1 0 1 0 1 1 1 0 0 0 0 0 0 11 0 1204.5724 P49792;P0DJD0;P0DJD1;Q7Z3J3;A6NKT7;Q99666;O14715 P49792 1900 1910 RANBP2;RGPD1;RGPD2;RGPD4;RGPD3;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 0.00666 99.53 By MS/MS 1 0 1 1 175570 175570 0 4260 964 4411 9888 8114 8114 1 42307 0 FGLEGCEVLIPALK RFEEFLQRKWSSEKRFGLEGCEVLIPALKT RFGLEGCEVLIPALKTIIDKSSENGVDYVI R F G L K T 1 0 0 0 1 0 2 2 0 1 3 1 0 1 1 0 0 0 0 1 0 0 14 0 1544.8273 Q02218 Q02218 278 291 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.00046955 165.63 By MS/MS 4 0 1 1 256400 256400 0 4261 1275 4412 9889 8115;8116 8116 2 24129 0 FGLFSAEIK MREMAGAWHMTVEQKFGLFSAEIKEADPLA MTVEQKFGLFSAEIKEADPLAASEASQPKP K F G I K E 1 0 0 0 0 0 1 1 0 1 1 1 0 2 0 1 0 0 0 0 0 0 9 0 1010.5437 P42356;A4QPH2;Q8N8J0 P42356 1264 1272 PI4KA;PI4KAP2;PI4KAP1 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2;Putative inactive phosphatidylinositol 4-kinase alpha-like protein P1 yes no 2 0.010816 104.06 By MS/MS 3 0.816 1 1 1 3 365160 365160 0 4262 880 4413 9890;9891;9892 8117;8118 8117 2 90741 0 FGLFTPGSR GRYVEFNLLYDRGTKFGLFTPGSRIESILM YDRGTKFGLFTPGSRIESILMSLPLTARWE K F G S R I 0 1 0 0 0 0 0 2 0 0 1 0 0 2 1 1 1 0 0 0 0 0 9 0 980.50797 P36551 P36551 405 413 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 0.028713 85.161 By MS/MS 7.5 0.5 1 1 2 1049200 1049200 0 4263 837 4414 9893;9894 8119 8119 1 16049 0 FGLLPLSMTSTR QEPHNILPLASSQIRFGLLPLSMTSTRKAK QIRFGLLPLSMTSTRKAKSTRNIETKAQVV R F G T R K 0 1 0 0 0 0 0 1 0 0 3 0 1 1 1 2 2 0 0 0 0 0 12 0 1321.7064 Q8WTW3 Q8WTW3 911 922 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.0085913 92.239 By MS/MS 4 0 1 1 383760 383760 0 4264 2010 4415 9895 8120 8120 975 1 36114 0 FGLYLPK GYRLATATFAGIENKFGLYLPKFKSPSVAV TFAGIENKFGLYLPKFKSPSVAVVQPKAAV K F G P K F 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 0 0 0 1 0 0 0 7 0 836.47963 O75746 O75746 653 659 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.017982 114.67 By MS/MS 5 0 1 1 1300500 1300500 0 4265 344 4416 9896 8121 8121 1 13043 0 FGMFEFLSNHMR LSSLLYGSIPKAAVRFGMFEFLSNHMRDAQ AVRFGMFEFLSNHMRDAQGRLDSTRGLLCG R F G M R D 0 1 1 0 0 0 1 1 1 0 1 0 2 3 0 1 0 0 0 0 0 0 12 0 1514.6799 P53007 P53007 102 113 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.033661 59.84 By MS/MS 8 0 1 1 313040 313040 0 4266 1026 4417 9897 8122 8122 562;563 0 3952.1 0 FGMTPSK ELVQYPVEHPDKFLKFGMTPSKGVLFYGPP EHPDKFLKFGMTPSKGVLFYGPPGCGKTLL K F G S K G 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 7 0 766.36836 P55072 P55072 506 512 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.020912 111.04 By MS/MS 4 0 1 1 631240 631240 0 4267 1054 4418 9898 8123 8123 588 1 59403 0 FGNEVIPVTVTVK INSYTRSKAAWEAGKFGNEVIPVTVTVKGQ GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR K F G V K G 0 0 1 0 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 4 0 0 13 0 1401.7868 P24752 P24752 231 243 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.001222 143.31 By MS/MS 7.5 0.5 1 1 2 10495000 10495000 0 4268 716 4419 9899;9900 8124;8125 8124 2 163180 0 FGNICVVR TASLLDYDTVAGADKFGNICVVRLPPNTND TVAGADKFGNICVVRLPPNTNDEVDEDPTG K F G V R L 0 1 1 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 8 0 963.49602 Q15393 Q15393 1050 1057 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.046084 94.662 By MS/MS 1 0 1 1 0 0 0 4269 1508 4420 9901 8126 8126 1 0 0 FGPALSVK GEDMDDERLKDLFGKFGPALSVKVMTDESG LKDLFGKFGPALSVKVMTDESGKSKGFGFV K F G V K V 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 8 0 817.46979 P11940;Q9H361 P11940 214 221 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.026461 92.47 By MS/MS 3.5 1.12 1 1 1 1 4 6381100 6381100 0 4270 586 4421 9902;9903;9904;9905 8127 8127 1 113030 0 FGPLTPELMVPR SKIIPALQSRCTRFRFGPLTPELMVPRLEH RFRFGPLTPELMVPRLEHVVEEEKVDISED R F G P R L 0 1 0 0 0 0 1 1 0 0 2 0 1 1 3 0 1 0 0 1 0 0 12 0 1355.7271 P40937 P40937 174 185 RFC5 Replication factor C subunit 5 yes yes 2 0.0075163 95.483 By MS/MS 7 0 2 2 1170500 1170500 0 4271 863 4422;4423 9906;9907 8128;8129 8128 445 2 18375 0 FGPVVAPK SVSVSAPAFYAPQKKFGPVVAPKPKVNPFR FYAPQKKFGPVVAPKPKVNPFRPGDSEPPP K F G P K P 1 0 0 0 0 0 0 1 0 0 0 1 0 1 2 0 0 0 0 2 0 0 8 0 813.47487 Q15942 Q15942 26 33 ZYX Zyxin yes yes 2 0.026261 92.692 By MS/MS 5 0 1 1 447080 447080 0 4272 1541 4424 9908 8130 8130 1 4484 0 FGPYYTEPVIAGLDPK YTLMSMVANLLYEKRFGPYYTEPVIAGLDP GPYYTEPVIAGLDPKTFKPFICSLDLIGCP R F G P K T 1 0 0 1 0 0 1 2 0 1 1 1 0 1 3 0 1 0 2 1 0 0 16 0 1765.8927 P49720 P49720 100 115 PSMB3 Proteasome subunit beta type-3 yes yes 2 7.7748E-07 203.61 By MS/MS 8.5 0.5 1 1 2 1210100 1210100 0 4273 956 4425 9909;9910 8131;8132;8133 8132 3 19702 0 FGQDIISPLLSVK NSTGEPVWKVLIYDRFGQDIISPLLSVKEL DRFGQDIISPLLSVKELRDMGITLHLLLHS R F G V K E 0 0 0 1 0 1 0 1 0 2 2 1 0 1 1 2 0 0 0 1 0 0 13 0 1415.8024 Q8WVM8 Q8WVM8 51 63 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.00024189 158.34 By MS/MS 5 0 1 1 503340 503340 0 4274 2028 4426 9911 8134 8134 1 5048.3 0 FGQGAHHAAGQAGNEAGR GIHHAAGQVGKEAEKFGQGAHHAAGQAGNE GAHHAAGQAGNEAGRFGQGVHHGLSEGWKE K F G G R F 5 1 1 0 0 2 1 5 2 0 0 0 0 1 0 0 0 0 0 0 0 0 18 0 1734.7935 Q6UWP8 Q6UWP8 242 259 SBSN Suprabasin yes no 3 9.0287E-07 156.72 By MS/MS 6 3.54 1 1 1 1 4 1146300 0 1146300 4275 1731 4427 9912;9913;9914;9915 8135;8136 8135 2 0 340340 FGQGGAGPVGGQGPR TMSGSMMGSDMRTERFGQGGAGPVGGQGPR FGQGGAGPVGGQGPRGMGPGTPAGYGRGRE R F G P R G 1 1 0 0 0 2 0 7 0 0 0 0 0 1 2 0 0 0 0 1 0 0 15 0 1340.6585 P23246 P23246 667 681 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0022697 111.27 By MS/MS By matching 4 0 2 1 1 2921300 2890400 30902 4276 700 4428 9916;9917 8137 8137 1 272010 65843 FGQGSGPIVLDDVR QLGCGWAMSAPGNAQFGQGSGPIVLDDVRC QFGQGSGPIVLDDVRCSGHESYLWSCPHNG Q F G V R C 0 1 0 2 0 1 0 3 0 1 1 0 0 1 1 1 0 0 0 2 0 0 14 0 1458.7467 Q9UGM3 Q9UGM3 289 302 DMBT1 Deleted in malignant brain tumors 1 protein yes no 2 0.001956 130.56 By MS/MS 1 0 1 1 196290 0 196290 4277 2722 4429 9918 8138 8138 0 0 196290 FGQGVDNAAGQAGNEAGR GVHHGANQAGSEAGKFGQGVDNAAGQAGNE GVDNAAGQAGNEAGRFGQGVHHAAGQAGNE K F G G R F 4 1 2 1 0 2 1 5 0 0 0 0 0 1 0 0 0 0 0 1 0 0 18 0 1717.7768 Q6UWP8 Q6UWP8 152 169 SBSN Suprabasin yes yes 2 1.0891E-25 273.07 By MS/MS 4.67 3.86 1 1 1 3 676500 0 676500 4278 1731 4430 9919;9920;9921 8139;8140;8141;8142 8140 4 0 188410 FGQGVHHAAGQAGNEAGR GVDNAAGQAGNEAGRFGQGVHHAAGQAGNE GVHHAAGQAGNEAGRFGQGVHHAAGQAGNE R F G G R F 4 1 1 0 0 2 1 5 2 0 0 0 0 1 0 0 0 0 0 1 0 0 18 0 1762.8248 Q6UWP8 Q6UWP8 170 187 SBSN Suprabasin yes no 3 0.00075584 118.5 By matching By MS/MS 1.75 0.829 2 1 1 2 2 1519400 106020 1413400 4279 1731 4431 9922;9923;9924;9925 8143;8144 8144 2 31656 212150 FGQLTYVR SHPFVGLAFKLEVGRFGQLTYVRSYQGELK FKLEVGRFGQLTYVRSYQGELKKGDTIYNT R F G V R S 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 8 0 982.52362 Q96RP9 Q96RP9 365 372 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0015788 147.29 By MS/MS 5.5 0.5 1 1 2 12267000 12267000 0 4280 2223 4432 9926;9927 8145;8146 8145 2 116790 0 FGQVYTEAK PVLLNCLMYKMCYYRFGQVYTEAKRPPGFD KMCYYRFGQVYTEAKRPPGFDRVRNAEIGN R F G A K R 1 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 1 1 0 0 9 0 1041.5131 P46977 P46977 647 655 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00060852 143.37 By MS/MS 2.5 1.12 1 1 1 1 4 4245000 4245000 0 4281 923 4433 9928;9929;9930;9931 8147;8148 8147 2 899410 0 FGQYNKEDPTSFR VLRWLDRQLIRLCQKFGQYNKEDPTSFRLS QKFGQYNKEDPTSFRLSDSFSLYPQFMFHL K F G F R L 0 1 1 1 0 1 1 1 0 0 0 1 0 2 1 1 1 0 1 0 0 0 13 1 1587.7318 Q15437 Q15437 559 571 SEC23B Protein transport protein Sec23B yes yes 3 0.0091228 88.021 By MS/MS 5 0 1 1 756190 756190 0 4282 1514 4434 9932 8149 8149 1 7584.2 0 FGSTADALVSDDETTR YKLLKKEMTLDLKTKFGSTADALVSDDETT GSTADALVSDDETTRLVTSLEDDFDEELDT K F G T R L 2 1 0 3 0 0 1 1 0 0 1 0 0 1 0 2 3 0 0 1 0 0 16 0 1683.7588 Q5JRA6 Q5JRA6 279 294 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 0.00059777 128.68 By MS/MS 1 0 1 1 268220 268220 0 4283 1606 4435 9933 8150 8150 1 64632 0 FGVQTDR KHESQKDYVKGFGGKFGVQTDRQDKCALGW YVKGFGGKFGVQTDRQDKCALGWDHQEKLQ K F G D R Q 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 7 0 821.40317 Q14247 Q14247 236 242 CTTN Src substrate cortactin yes yes 2 0.034026 101.69 By MS/MS By matching 5 0 2 1 1 652020 632260 19758 4284 1435 4436 9934;9935 8151 8151 1 6341.3 16592 FGVTSGSSELEK GQTLMINQLIDMEWKFGVTSGSSELEKVGS EWKFGVTSGSSELEKVGSIFLQLKLVVKKG K F G E K V 0 0 0 0 0 0 2 2 0 0 1 1 0 1 0 3 1 0 0 1 0 0 12 0 1239.5983 Q86VX2 Q86VX2 141 152 COMMD7 COMM domain-containing protein 7 yes yes 2 3.4595E-05 172.27 By MS/MS 9 0 1 1 693500 693500 0 4285 1834 4437 9936 8152 8152 1 13648 0 FGVVLDEIKPSSAPELQAVR ERDVFLYRAYLAQRKFGVVLDEIKPSSAPE DEIKPSSAPELQAVRMFADYLAHESRRDSI K F G V R M 2 1 0 1 0 1 2 1 0 1 2 1 0 1 2 2 0 0 0 3 0 0 20 1 2154.1685 O14579 O14579 66 85 COPE Coatomer subunit epsilon yes yes 3 1.2074E-05 129.05 By MS/MS 8 0 1 1 1134700 1134700 0 4286 127 4438 9937 8153 8153 1 14325 0 FGYVDFESAEDLEK NDLAVVDVRIGMTRKFGYVDFESAEDLEKA KFGYVDFESAEDLEKALELTGLKVFGNEIK K F G E K A 1 0 0 2 0 0 3 1 0 0 1 1 0 2 0 1 0 0 1 1 0 0 14 0 1647.7304 P19338 P19338 349 362 NCL Nucleolin yes yes 2 4.1224E-07 205.12 By MS/MS 4 0 1 1 363340 363340 0 4287 659 4439 9938 8154 8154 1 34192 0 FHDNFGFDDLVR EFGFGFSFSPGGGIRFHDNFGFDDLVRDFN GIRFHDNFGFDDLVRDFNSIFSDMGAWTLP R F H V R D 0 1 1 3 0 0 0 1 1 0 1 0 0 3 0 0 0 0 0 1 0 0 12 0 1480.6735 O00165 O00165 75 86 HAX1 HCLS1-associated protein X-1 yes yes 2;3 4.6375E-05 166.11 By MS/MS 7.33 0.471 2 1 3 991030 991030 0 4288 86 4440 9939;9940;9941 8155;8156 8155 2 15186 0 FHEICSNLVK RIFGSNKWTTEQQQRFHEICSNLVKTRRRA EQQQRFHEICSNLVKTRRRAVGWWKRLFTL R F H V K T 0 0 1 0 1 0 1 0 1 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1245.6176 Q15041 Q15041 105 114 ARL6IP1 ADP-ribosylation factor-like protein 6-interacting protein 1 yes yes 2;3 2.2791E-05 166.09 By MS/MS 9 0 2 2 6076100 6076100 0 4289 1478 4441 9942;9943 8157;8158 8157 2 119580 0 FHHTIGGSR TSAGRKSRGLGKGHKFHHTIGGSRRAAWRR LGKGHKFHHTIGGSRRAAWRRRNTLQLHRY K F H S R R 0 1 0 0 0 0 0 2 2 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1010.5046 P61313 P61313 180 188 RPL15 60S ribosomal protein L15 yes yes 3 0.0014613 131.5 By MS/MS 8 0 1 1 0 0 0 4290 1121 4442 9944 8159 8159 1 0 0 FHPEPYGLEDDQR QPQVRVGGSSVDLHRFHPEPYGLEDDQRSM HRFHPEPYGLEDDQRSMGYDDLDYGMMSDY R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 O60716 O60716 275 287 CTNND1 Catenin delta-1 yes yes 2 0.0011726 123.01 By MS/MS 4 0 1 1 1391500 1391500 0 4291 272 4443 9945 8160;8161 8160 2 130950 0 FHVEEEGKGK ANPAAGSVILLENLRFHVEEEGKGKDASGN LENLRFHVEEEGKGKDASGNKVKAEPAKIE R F H G K D 0 0 0 0 0 0 3 2 1 0 0 2 0 1 0 0 0 0 0 1 0 0 10 1 1158.5669 P00558 P00558 124 133 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.0064049 117.89 By MS/MS 7 0 1 1 604220 604220 0 4292 447 4444 9946 8162 8162 1 9485.1 0 FHVEEEGKGKDASGNK ANPAAGSVILLENLRFHVEEEGKGKDASGN HVEEEGKGKDASGNKVKAEPAKIEAFRASL R F H N K V 1 0 1 1 0 0 3 3 1 0 0 3 0 1 0 1 0 0 0 1 0 0 16 2 1730.8224 P00558 P00558 124 139 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.039936 67.102 By MS/MS 7 0 1 1 737810 737810 0 4293 447 4445 9947 8163 8163 1 11582 0 FIADQLDHLNVTK EAIKAAATSKFPPHRFIADQLDHLNVTKKW HRFIADQLDHLNVTKKWS____________ R F I T K K 1 0 1 2 0 1 0 0 1 1 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1512.7936 Q9BQC6 Q9BQC6 87 99 MRPL57 Ribosomal protein 63, mitochondrial yes yes 2;3 6.554E-17 227.48 By MS/MS 9.67 0.471 1 2 3 3092100 3092100 0 4294 2289 4446 9948;9949;9950 8164;8165 8165 2 164430 0 FIAGTGCLVR VGTNMDNRLPLENGRFIAGTGCLVRAVEMA LENGRFIAGTGCLVRAVEMAAQRQADIIGK R F I V R A 1 1 0 0 1 0 0 2 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1092.575 A6NDG6 A6NDG6 211 220 PGP Phosphoglycolate phosphatase yes yes 2 0.00091224 125.31 By MS/MS 8 0 1 1 2339000 2339000 0 4295 20 4447 9951 8166 8166 1 29530 0 FIAVGYVDDTQFVR YFFTSVSRPGRGEPRFIAVGYVDDTQFVRF RFIAVGYVDDTQFVRFDSDAASQRMEPRAP R F I V R F 1 1 0 2 0 1 0 1 0 1 0 0 0 2 0 0 1 0 1 3 0 0 14 0 1628.8199 P04439 P04439 46 59 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain yes yes 2 0.0004694 134.75 By MS/MS 7 0 1 1 298800 298800 0 4296 474 4448 9952 8167 8167 1 4690.6 0 FICDASSLHQVR DVKETEDEEERNVFKFICDASSLHQVRKKL VFKFICDASSLHQVRKKLDSLGLCSVSCAL K F I V R K 1 1 0 1 1 1 0 0 1 1 1 0 0 1 0 2 0 0 0 1 0 0 12 0 1431.6929 Q9BSH4 Q9BSH4 232 243 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2;3 4.3495E-07 191.4 By MS/MS 8 0 2 2 4756700 4756700 0 4297 2306 4449 9953;9954 8168;8169 8169 2 60053 0 FICISDLR ETGYTYILPKNVLKKFICISDLRAQIAGYL PKNVLKKFICISDLRAQIAGYLYGVSPPDN K F I L R A 0 1 0 1 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 8 0 1022.5219 Q6P2Q9 Q6P2Q9 2114 2121 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0033553 133.12 By MS/MS 1.5 0.5 1 1 2 1244700 1244700 0 4298 1708 4450 9955;9956 8170;8171 8171 2 414610 0 FICIYPAYLNNK ______________________________ QDRFICIYPAYLNNKKTIAEGRRIPISKAV R F I N K K 1 0 2 0 1 0 0 0 0 2 1 1 0 1 1 0 0 0 2 0 0 0 12 0 1514.7592 P09132 P09132 15 26 SRP19 Signal recognition particle 19 kDa protein yes yes 2 0.00036125 139.97 By MS/MS 10 0 1 1 113740 113740 0 4299 533 4451 9957 8172;8173 8172 2 6130.3 0 FICTTSAIQNR AKAISEQTGKELLYKFICTTSAIQNRFKYA LLYKFICTTSAIQNRFKYARVTPDTDWARL K F I N R F 1 1 1 0 1 1 0 0 0 2 0 0 0 1 0 1 2 0 0 0 0 0 11 0 1309.6449 P53396 P53396 18 28 ACLY ATP-citrate synthase yes yes 2 2.2911E-09 216.12 By MS/MS 4.17 2.91 1 1 1 1 1 1 6 23509000 23509000 0 4300 1030 4452 9958;9959;9960;9961;9962;9963 8174;8175;8176 8175 3 2124000 0 FIDTTLAITSR LDSRTENCLSSCVDRFIDTTLAITSRFAQI CVDRFIDTTLAITSRFAQIVQKGGQ_____ R F I S R F 1 1 0 1 0 0 0 0 0 2 1 0 0 1 0 1 3 0 0 0 0 0 11 0 1236.6714 Q9Y5J9 Q9Y5J9 63 73 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 5.6165E-13 227.27 By MS/MS 10 0 1 1 658020 658020 0 4301 2911 4453 9964 8177 8177 1 35465 0 FIEDELQIPVK RAFKELPVNAQNYVRFIEDELQIPVKWIGV NYVRFIEDELQIPVKWIGVGKSRESMIQLF R F I V K W 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 11 0 1329.718 P30520 P30520 431 441 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.00012088 158.79 By MS/MS 6.5 0.5 1 1 2 1168900 1168900 0 4302 774 4454 9965;9966 8178 8178 1 15521 0 FIEGCLENLGNNR CSLVCWFTDRQIRMRFIEGCLENLGNNRSV MRFIEGCLENLGNNRSVVISLRLLPKLFGT R F I N R S 0 1 3 0 1 0 2 2 0 1 2 0 0 1 0 0 0 0 0 0 0 0 13 0 1534.7198 Q70CQ2 Q70CQ2 903 915 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 2 0.0041415 106.16 By MS/MS 1 0 1 1 91012 91012 0 4303 1749 4455 9967 8179 8179 1 21931 0 FIEIAAR KLNTLLQRAPQCLGKFIEIAARKKRNFILD RAPQCLGKFIEIAARKKRNFILDQTNVSAA K F I A R K 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 818.46504 Q00839 Q00839 566 572 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.039458 97.602 By MS/MS 4 0.816 1 1 1 3 2514700 2514700 0 4304 1264 4456 9968;9969;9970 8180 8180 1 181380 0 FIGELFK EARDIARRRSLGNIKFIGELFKLKMLTEAI RRSLGNIKFIGELFKLKMLTEAIMHDCVVK K F I F K L 0 0 0 0 0 0 1 1 0 1 1 1 0 2 0 0 0 0 0 0 0 0 7 0 852.47454 Q04637;O43432 Q04637 901 907 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.012706 128.38 By MS/MS 2.5 1.12 1 1 1 1 4 16832000 16832000 0 4305 1291;210 4457 9971;9972;9973;9974 8181;8182 8182 2 5061700 0 FIGELFKLK EARDIARRRSLGNIKFIGELFKLKMLTEAI SLGNIKFIGELFKLKMLTEAIMHDCVVKLL K F I L K M 0 0 0 0 0 0 1 1 0 1 2 2 0 2 0 0 0 0 0 0 0 0 9 1 1093.6536 Q04637;O43432 Q04637 901 909 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.012378 110.12 By MS/MS 2 0 1 1 128600 128600 0 4306 1291;210 4458 9975 8183 8183 1 43496 0 FIGPSPEVVR ERADFAQACQDAGVRFIGPSPEVVRKMGDK DAGVRFIGPSPEVVRKMGDKVEARAIAIAA R F I V R K 0 1 0 0 0 0 1 1 0 1 0 0 0 1 2 1 0 0 0 2 0 0 10 0 1099.6026 P11498 P11498 138 147 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.022362 85.676 By MS/MS 3.5 0.5 1 1 2 1714000 1714000 0 4307 580 4459 9976;9977 8184 8184 1 51008 0 FIHDQTSPNPK EAVVVVCPMETIKVKFIHDQTSPNPKYRGF IKVKFIHDQTSPNPKYRGFFHGVREIVREQ K F I P K Y 0 0 1 1 0 1 0 0 1 1 0 1 0 1 2 1 1 0 0 0 0 0 11 0 1282.6306 P53007 P53007 150 160 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2;3 8.7057E-07 191.45 By MS/MS By matching 8.57 0.728 4 2 1 5 2 39041000 38913000 127830 4308 1026 4460 9978;9979;9980;9981;9982;9983;9984 8185;8186 8186 2 503730 172500 FIHGLIK ENYLEENLLYAPSLRFIHGLIKQFSENIYE LLYAPSLRFIHGLIKQFSENIYEAFLVGKP R F I I K Q 0 0 0 0 0 0 0 1 1 2 1 1 0 1 0 0 0 0 0 0 0 0 7 0 826.50651 Q7L2E3 Q7L2E3 974 980 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.042413 95.378 By MS/MS 3 0 1 1 571900 571900 0 4309 1761 4461 9985 8187 8187 1 10464 0 FIHVSHLNANIK PQAIAQLSKEAGVEKFIHVSHLNANIKSSS VEKFIHVSHLNANIKSSSRYLRNKAVGEKV K F I I K S 1 0 2 0 0 0 0 0 2 2 1 1 0 1 0 1 0 0 0 1 0 0 12 0 1391.7674 Q16795 Q16795 164 175 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 3 0.0076406 127.51 By MS/MS 7 0 1 1 3093300 3093300 0 4310 1559 4462 9986 8188 8188 1 48560 0 FIINSYPK RSFLLAKKSGENVAKFIINSYPKYFQKDIA SGENVAKFIINSYPKYFQKDIAEPHIPCLM K F I P K Y 0 0 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 0 8 0 980.53312 Q96EY7 Q96EY7 119 126 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.010393 110.31 By MS/MS 5 0 1 1 6319100 6319100 0 4311 2151 4463 9987 8189 8189 1 63378 0 FIIPNVVK ESRLNLVQRNVNIFKFIIPNVVKYSPNCKL RNVNIFKFIIPNVVKYSPNCKLLIVSNPVD K F I V K Y 0 0 1 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 0 2 0 0 8 0 928.57459 P00338 P00338 119 126 LDHA L-lactate dehydrogenase A chain yes yes 2 0.023468 95.793 By MS/MS 8 0.816 1 1 1 3 3885800 3885800 0 4312 440 4464 9988;9989;9990 8190 8190 1 53619 0 FILNALGEK QSCRHFCNKIWNALRFILNALGEKFVPQPA IWNALRFILNALGEKFVPQPAEELSPSSPM R F I E K F 1 0 1 0 0 0 1 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1003.5702 Q5ST30 Q5ST30 755 763 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.011061 98.582 By MS/MS 4 0 1 1 560540 560540 0 4313 1621 4465 9991 8191 8191 1 52751 0 FIMESGAK LGGLAVRRACYGVLRFIMESGAKGCEVVVS ACYGVLRFIMESGAKGCEVVVSGKLRGQRA R F I A K G 1 0 0 0 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 8 0 881.43169 P23396 P23396 125 132 RPS3 40S ribosomal protein S3 yes yes 2 0.043599 84.916 By MS/MS 8 0.816 1 1 1 3 5782300 5782300 0 4314 703 4466 9992;9993;9994 8192 8192 1 76739 0 FIMESGAKGCEVVVSGK LGGLAVRRACYGVLRFIMESGAKGCEVVVS MESGAKGCEVVVSGKLRGQRAKSMKFVDGL R F I G K L 1 0 0 0 1 0 2 3 0 1 0 2 1 1 0 2 0 0 0 3 0 0 17 1 1796.8801 P23396 P23396 125 141 RPS3 40S ribosomal protein S3 yes yes 3 0.02378 74.428 By MS/MS 8 0 1 1 1782500 1782500 0 4315 703 4467 9995 8193 8193 349 1 22504 0 FINDQYEK GDHINNENCWQPIMKFINDQYEKYLQEEVN CWQPIMKFINDQYEKYLQEEVNINRKKRIP K F I E K Y 0 0 1 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 8 0 1055.4924 Q9UHD8 Q9UHD8 382 389 SEPT9 Septin-9 yes yes 2 0.042822 85.212 By MS/MS 5 0 1 1 567310 567310 0 4316 2730 4468 9996 8194 8194 1 5689.9 0 FINNNAVTK NDAGFVAALDKACGRFINNNAVTKMAQSSS DKACGRFINNNAVTKMAQSSSKSPELLARY R F I T K M 1 0 3 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1019.54 Q13616 Q13616 402 410 CUL1 Cullin-1 yes yes 2 0.0095404 101.25 By MS/MS 4.5 0.5 1 1 2 3804400 3804400 0 4317 1402 4469 9997;9998 8195 8195 1 299280 0 FIQPNIGELPTALK KEGLDEVAGIINDAKFIQPNIGELPTALKG KFIQPNIGELPTALKGRLNDSNKILVQQTL K F I L K G 1 0 1 0 0 1 1 1 0 2 2 1 0 1 2 0 1 0 0 0 0 0 14 0 1539.8661 Q14008 Q14008 893 906 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00024444 171.67 By MS/MS 2 0 1 1 287800 287800 0 4318 1417 4470 9999 8196 8196 1 97347 0 FIQSEMSEAVER QSIEDKEDKPPPRQKFIQSEMSEAVERARK RQKFIQSEMSEAVERARKRREEEERRAREE K F I E R A 1 1 0 0 0 1 3 0 0 1 0 0 1 1 0 2 0 0 0 1 0 0 12 0 1424.6606 Q5JSZ5 Q5JSZ5 494 505 PRRC2B Protein PRRC2B yes yes 2 3.4881E-18 263.3 By MS/MS 1.5 0.5 1 1 2 486590 486590 0 4319 1609 4471 10000;10001 8197 8197 1 155850 0 FISENYLVR DAEVLMSLYDPVESKFISENYLVRWSSSGL DPVESKFISENYLVRWSSSGLPKDIDRLHN K F I V R W 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 1 1 0 0 9 0 1139.5975 Q14185 Q14185 254 262 DOCK1 Dedicator of cytokinesis protein 1 yes yes 2 0.0015511 132.76 By MS/MS 2 0 1 1 0 0 0 4320 1429 4472 10002 8198 8198 1 0 0 FISVGYVDDTQFVR YFDTAVSRPGRGEPRFISVGYVDDTQFVRF RFISVGYVDDTQFVRFDSDAASPRGEPRAP R F I V R F 0 1 0 2 0 1 0 1 0 1 0 0 0 2 0 1 1 0 1 3 0 0 14 0 1644.8148 P01889;P13747;P10321;P01893 P10321 46 59 HLA-B;HLA-E;HLA-C;HLA-H HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, alpha chain E;HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H no no 2 3.1414E-12 247.3 By MS/MS 7 0 1 1 425580 425580 0 4321 558;456 4473 10003 8199 8199 1 6680.9 0 FITDNTVEER RAHRIGQTKTVRVFRFITDNTVEERIVERA VRVFRFITDNTVEERIVERAEMKLRLDSIV R F I E R I 0 1 1 1 0 0 2 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1222.583 O60264 O60264 607 616 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 1.6408E-07 185.33 By MS/MS 4 0.816 1 1 1 3 4985000 4985000 0 4322 251 4474 10004;10005;10006 8200 8200 1 153280 0 FITLLADTSDSR AASSSVCKLDGLIHRFITLLADTSDSRALE IHRFITLLADTSDSRALENRGADASMACRK R F I S R A 1 1 0 2 0 0 0 0 0 1 2 0 0 1 0 2 2 0 0 0 0 0 12 0 1337.6827 Q8N201 Q8N201 1842 1853 INTS1 Integrator complex subunit 1 yes yes 2 1.2019E-13 247.22 By MS/MS 3 0.816 1 1 1 3 572090 572090 0 4323 1907 4475 10007;10008;10009 8201 8201 1 151530 0 FITPAHYSDVVDER LEENITEEFLMECGRFITPAHYSDVVDERS RFITPAHYSDVVDERSIVKLCGYPLCQKKL R F I E R S 1 1 0 2 0 0 1 0 1 1 0 0 0 1 1 1 1 0 1 2 0 0 14 0 1647.7893 Q8IXW5 Q8IXW5 81 94 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 3 0.030965 74.475 By MS/MS 5 0 1 1 1259900 1259900 0 4324 1879 4476 10010 8202 8202 1 12636 0 FKDLGEEHFK GVFRRDTHKSEIAHRFKDLGEEHFKGLVLI EIAHRFKDLGEEHFKGLVLIAFSQYLQQCP R F K F K G 0 0 0 1 0 0 2 1 1 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1248.6139 CON__P02769 CON__P02769 35 44 yes yes 3 0.0034908 126.03 By MS/MS 5.5 0.5 1 1 2 2656600 2656600 0 + 4325 43 4477 10011;10012 8203 8203 1 23681 0 FKEEGVRDVLK LYLINSPVVRAENLRFKEEGVRDVLKDVLL ENLRFKEEGVRDVLKDVLLPWYNAYRFLIQ R F K L K D 0 1 0 1 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 2 0 0 11 2 1318.7245 P41252 P41252 640 650 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.020321 132.32 By MS/MS 3.5 0.5 1 1 2 1119400 1119400 0 4326 871 4478 10013;10014 8204 8204 1 41448 0 FKEPLPEYVR KATRRRLAVLPYELRFKEPLPEYVRLVTEF PYELRFKEPLPEYVRLVTEFSKKTGDYPSL R F K V R L 0 1 0 0 0 0 2 0 0 0 1 1 0 1 2 0 0 0 1 1 0 0 10 1 1276.6816 Q9ULX3 Q9ULX3 55 64 NOB1 RNA-binding protein NOB1 yes yes 2 0.046898 99.973 By MS/MS 7 0 1 1 1091800 1091800 0 4327 2777 4479 10015 8205 8205 1 17140 0 FKESFAEMNR SSLSMDEKVELYRIKFKESFAEMNRGSNEW LYRIKFKESFAEMNRGSNEWKTVVGGAMFF K F K N R G 1 1 1 0 0 0 2 0 0 0 0 1 1 2 0 1 0 0 0 0 0 0 10 1 1257.5812 P13073 P13073 86 95 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.041271 98.04 By MS/MS 10 0 1 1 254150 254150 0 4328 598 4480 10016 8206 8206 1 13697 0 FKEVGEAFTILSDPK HSGASAEVQKEEEKKFKEVGEAFTILSDPK FKEVGEAFTILSDPKKKTRYDSGQDLDEEG K F K P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 2 1 1 1 0 0 1 0 0 15 1 1679.877 Q99615 Q99615 428 442 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.0029899 157.37 By MS/MS 6 0 1 1 1201600 1201600 0 4329 2253 4481 10017 8207 8207 1 8260.3 0 FKGFNDGLEELCK GVKLRDKERQIIKERFKGFNDGLEELCKIQ ERFKGFNDGLEELCKIQKAWAIPDTEQRDR R F K C K I 0 0 1 1 1 0 2 2 0 0 2 2 0 2 0 0 0 0 0 0 0 0 13 1 1555.7341 Q9UPT5 Q9UPT5 656 668 EXOC7 Exocyst complex component 7 yes yes 3 0.014687 110.15 By MS/MS 5 0 1 1 914240 914240 0 4330 2801 4482 10018 8208 8208 1 9169.4 0 FKKYEEIDNAPEER TAAITKILAEGGGAKFKKYEEIDNAPEERA KFKKYEEIDNAPEERARGITINAAHVEYST K F K E R A 1 1 1 1 0 0 4 0 0 1 0 2 0 1 1 0 0 0 1 0 0 0 14 2 1766.8475 P49411 P49411 89 102 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 3.196E-06 226.42 By MS/MS By matching 7.62 1.22 1 4 1 1 1 7 1 23115000 23094000 20914 4331 949 4483 10019;10020;10021;10022;10023;10024;10025;10026 8209;8210;8211;8212;8213;8214 8212 6 392580 37666 FKLITEDVQGK VSLADLQNDEVAFRKFKLITEDVQGKNCLT AFRKFKLITEDVQGKNCLTNFHGMDLTRDK K F K G K N 0 0 0 1 0 1 1 1 0 1 1 2 0 1 0 0 1 0 0 1 0 0 11 1 1276.7027 P61247 P61247 84 94 RPS3A 40S ribosomal protein S3a yes yes 2;3 1.602E-06 199.33 By MS/MS 8.5 0.957 1 2 2 1 6 25167000 25167000 0 4332 1118 4484 10027;10028;10029;10030;10031;10032 8215;8216 8215 2 327200 0 FKNELER KSTVVKAISGVHTVRFKNELERNITIKLGY ISGVHTVRFKNELERNITIKLGYANAKIYK R F K E R N 0 1 1 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 1 934.48723 P41091;Q2VIR3 P41091 69 75 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 3 0.026861 101.64 By MS/MS 6.5 0.5 1 1 2 8744000 8744000 0 4333 866 4485 10033;10034 8217;8218;8219 8218 3 63600 0 FKNTEAIGNEVTR AWSISPYLAVQLPARFKNTEAIGNEVTRLV ARFKNTEAIGNEVTRLVRLDPGAVSDVPEA R F K T R L 1 1 2 0 0 0 2 1 0 1 0 1 0 1 0 0 2 0 0 1 0 0 13 1 1477.7525 P42356 P42356 1562 1574 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 3 0.043862 64.374 By MS/MS 2 0 1 1 425430 425430 0 4334 880 4486 10035 8220 8220 1 143900 0 FKQISQAYEVLSDAK ALKYHPDKNPNEGEKFKQISQAYEVLSDAK FKQISQAYEVLSDAKKRELYDKGGEQAIKE K F K A K K 2 0 0 1 0 2 1 0 0 1 1 2 0 1 0 2 0 0 1 1 0 0 15 1 1725.8938 P31689 P31689 45 59 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 2.3958E-06 209.11 By MS/MS 6.33 0.471 2 1 3 4469300 4469300 0 4335 787 4487 10036;10037;10038 8221;8222 8222 2 33738 0 FKQLETEQR SVNTGPKGVINDWRRFKQLETEQREEQCRE INDWRRFKQLETEQREEQCREMERLIKKLS R F K Q R E 0 1 0 0 0 2 2 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 9 1 1177.6091 Q13371 Q13371 69 77 PDCL Phosducin-like protein yes yes 2 0.0095454 122.18 By MS/MS 7.5 0.5 2 2 4 7502300 7502300 0 4336 1375 4488 10039;10040;10041;10042 8223;8224;8225 8225 3 104150 0 FKQWNGK ELWFSDDPNVTKTLRFKQWNGKERSIYFQP PNVTKTLRFKQWNGKERSIYFQPPSFYVSA R F K G K E 0 0 1 0 0 1 0 1 0 0 0 2 0 1 0 0 0 1 0 0 0 0 7 1 906.47119 O95831 O95831 193 199 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.032418 95.793 By MS/MS 5 0 1 1 572840 572840 0 4337 429 4489 10043 8226 8226 1 5745.3 0 FLAALVQK F L Q K 2 0 0 0 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 888.54329 REV__Q96DM3 yes yes 2 0.005721 122.15 By MS/MS 4.67 0.471 1 2 3 1988900 1988900 0 + 4338 2980 4490 10044;10045;10046 8227 8227 1 54427 0 FLAEEGFYK VIHEFDPYFNYRTTRFLAEEGFYKFHNWFD NYRTTRFLAEEGFYKFHNWFDDRAWYPLGR R F L Y K F 1 0 0 0 0 0 2 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1102.5335 P46977 P46977 59 67 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00060852 153.04 By MS/MS 3.8 1.72 1 1 1 1 1 5 3033400 3033400 0 4339 923 4491 10047;10048;10049;10050;10051 8228;8229 8228 2 375020 0 FLAPYTTFSR KSIHISCPKENASSKFLAPYTTFSRIHTKS NASSKFLAPYTTFSRIHTKSITCLDISSRG K F L S R I 1 1 0 0 0 0 0 0 0 0 1 0 0 2 1 1 2 0 1 0 0 0 10 0 1201.6132 Q9BRP4 Q9BRP4 80 89 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 2 0.027893 83.005 By MS/MS 7 0 1 1 347300 347300 0 4340 2297 4492 10052 8230 8230 1 5452.1 0 FLASVLHNGLGR ______________________________ PSRFLASVLHNGLGRYVQQLQRLSFSVSRD R F L G R Y 1 1 1 0 0 0 0 2 1 0 3 0 0 1 0 1 0 0 0 1 0 0 12 0 1282.7146 Q8N983 Q8N983 10 21 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.00011521 123.11 By MS/MS 9.5 0.5 1 1 2 673080 673080 0 4341 1933 4493 10053;10054 8231;8232 8231 2 21734 0 FLAVGLVDNTVR CMSLANVPPGEQRSRFLAVGLVDNTVRIIS RSRFLAVGLVDNTVRIISLDPSDCLQPLSM R F L V R I 1 1 1 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 3 0 0 12 0 1302.7296 Q15393 Q15393 604 615 SF3B3 Splicing factor 3B subunit 3 yes yes 2 2.9598E-06 194.12 By MS/MS 2.5 1.12 1 1 1 1 4 1751300 1751300 0 4342 1508 4494 10055;10056;10057;10058 8233;8234;8235;8236;8237 8235 5 329410 0 FLDELEDEAK LAIYGYTFYSISQERFLDELEDEAKAARAR ISQERFLDELEDEAKAARARALARASGS__ R F L A K A 1 0 0 2 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 10 0 1207.5608 Q9Y2R0 Q9Y2R0 84 93 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 1.8737E-07 182.76 By MS/MS By MS/MS 10 0 2 1 1 5823400 5772100 51266 4343 2839 4495 10059;10060 8238;8239;8240 8240 3 311100 65634 FLDGIYVSEK LIQQATTVKNKDIRKFLDGIYVSEKGTVQQ KDIRKFLDGIYVSEKGTVQQADE_______ K F L E K G 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1169.5968 P32969 P32969 175 184 RPL9 60S ribosomal protein L9 yes yes 2 0.0001275 153.24 By MS/MS By MS/MS 9 0 2 1 1 3957100 3840300 116790 4344 798 4496 10061;10062 8241;8242 8242 2 75578 266310 FLDGQAVLR KHDLYIYAGHGAGARFLDGQAVLRLSCRAV HGAGARFLDGQAVLRLSCRAVALLFGCSSA R F L L R L 1 1 0 1 0 1 0 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1017.5607 Q14674 Q14674 2009 2017 ESPL1 Separin yes yes 2 0.00025866 154.12 By MS/MS 2 0 1 1 272790 272790 0 4345 1449 4497 10063 8243 8243 1 92268 0 FLDQNLQK RLARDANSENCNKNKFLDQNLQKYQAECSQ ENCNKNKFLDQNLQKYQAECSQFKAKLASL K F L Q K Y 0 0 1 1 0 2 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5291 P15924 P15924 1057 1064 DSP Desmoplakin yes yes 2 0.00033209 163.67 By MS/MS By MS/MS 2.33 1.11 2 1 2 1 4 2 6765400 3527100 3238300 4346 628 4498 10064;10065;10066;10067;10068;10069 8244;8245;8246;8247 8246 4 598380 549660 FLEEYLSSTPQR ______________________________ ISRFLEEYLSSTPQRLKLLDAYLLYILLTG R F L Q R L 0 1 0 0 0 1 2 0 0 0 2 0 0 1 1 2 1 0 1 0 0 0 12 0 1468.7198 P61803 P61803 12 23 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 1.5257E-06 198.62 By MS/MS 10 0 1 1 3945300 3945300 0 4347 1130 4499 10070 8248 8248 1 212640 0 FLENALAVSTK GLVLHGVMEYDLSLRFLENALAVSTKYHGP LSLRFLENALAVSTKYHGPKALKVALSHHL R F L T K Y 2 0 1 0 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 11 0 1191.6499 O75153 O75153 1126 1136 CLUH Clustered mitochondria protein homolog yes yes 2 1.7402E-05 166.29 By MS/MS 3 0 1 1 294250 294250 0 4348 300 4500 10071 8249 8249 1 5383.9 0 FLENLLEK RQEQLNKASLLSSKKFLENLLEKFNSHVDH SLLSSKKFLENLLEKFNSHVDHGTGALVIS K F L E K F 0 0 1 0 0 0 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 O75165 O75165 507 514 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0045756 127.46 By MS/MS 2.5 0.5 1 1 2 281830 281830 0 4349 302 4501 10072;10073 8250 8250 1 72224 0 FLENVAAAETEK PSADTSSERSIYKARFLENVAAAETEKQVA KARFLENVAAAETEKQVALAQGRAETLAGA R F L E K Q 3 0 1 0 0 0 3 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1320.6561 Q9Y613 Q9Y613 443 454 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 6.9157E-06 181.68 By MS/MS 3 0 1 1 357160 357160 0 4350 2930 4502 10074 8251 8251 1 6535 0 FLEQLQELDAK ALVTAILEAPVTEPRFLEQLQELDAKAAAV TEPRFLEQLQELDAKAAAVREQEARGTAAC R F L A K A 1 0 0 1 0 2 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 11 0 1332.6925 Q8N1B4 Q8N1B4 195 205 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 2.0108E-06 180.66 By MS/MS 4.5 0.5 1 1 2 3573400 3573400 0 4351 1902 4503 10075;10076 8252 8252 1 290250 0 FLEQQNK KTLNNKFASFIDKVRFLEQQNKVLDTKWTL ASFIDKVRFLEQQNKVLDTKWTLLQEQGTK R F L N K V 0 0 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 CON__P13647;P13647;CON__P05787;P05787;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__H-INV:HIT000292931;P14136;P08670;CON__Q922U2;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q5XKE5;Q5XKE5;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4;CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__Q61726;CON__P78386;P78386 CON__P13647 188 194 KRT5;KRT8;KRT84;GFAP;VIM;KRT6A;KRT75;KRT6C;KRT3;KRT79;KRT78;KRT86;KRT81;KRT83;KRT85 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Glial fibrillary acidic protein;Vimentin;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 78;Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb5 no no 2 0.015692 143.85 By MS/MS By MS/MS 5.57 3.06 2 1 1 2 1 1 1 2 1 2 4 10 50207000 17475000 32731000 + 4352 52;44;56;40;74;48;70;68;35 4504 10077;10078;10079;10080;10081;10082;10083;10084;10085;10086;10087;10088;10089;10090 8253;8254;8255;8256;8257;8258;8259;8260 8257 8 2051700 18114000 FLEQQNKVLDTK KTLNNKFASFIDKVRFLEQQNKVLDTKWTL KVRFLEQQNKVLDTKWTLLQEQGTKTVRQN R F L T K W 0 0 1 1 0 2 1 0 0 0 2 2 0 1 0 0 1 0 0 1 0 0 12 1 1461.7827 CON__P13647;P13647;CON__Q922U2;CON__P04259;CON__P48668;P48668 CON__P13647 188 199 KRT5;KRT6C Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C no no 2 2.9486E-19 243.91 By matching By MS/MS 5.29 2.81 1 2 1 1 1 1 2 5 3589500 1290800 2298600 + 4353 52;44;56;74 4505 10091;10092;10093;10094;10095;10096;10097 8261;8262;8263;8264;8265 8261 5 114610 695960 FLEQQNKVLETK KTLNNKFASFIDKVRFLEQQNKVLETKWTL KVRFLEQQNKVLETKWTLLQEQGTKTVRQN R F L T K W 0 0 1 0 0 2 2 0 0 0 2 2 0 1 0 0 1 0 0 1 0 0 12 1 1475.7984 CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P12035;P12035;CON__Q5XKE5;Q5XKE5;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__P02538 183 194 KRT6A;KRT75;KRT3;KRT79;KRT78 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 78 no no 2;3 1.5488E-12 218.55 By matching By MS/MS 5.16 3 2 2 4 2 2 2 2 3 4 15 16211000 1819100 14392000 + 4354 40;48;70;68 4506 10098;10099;10100;10101;10102;10103;10104;10105;10106;10107;10108;10109;10110;10111;10112;10113;10114;10115;10116 8266;8267;8268;8269;8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281;8282;8283 8272 18 30257 4475700 FLEQQNQVLETK KVLNDKFASFIDKVRFLEQQNQVLETKWEL KVRFLEQQNQVLETKWELLQQLDLNNCKKN R F L T K W 0 0 1 0 0 3 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1475.762 CON__Q14CN4-1;CON__Q6IME9;Q14CN4;CON__Q3SY84;Q3SY84;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46 CON__Q7RTS7 160 171 KRT72;KRT71;KRT74;KRT73 Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 no no 2 1.7081E-13 218.55 By MS/MS By MS/MS 4.09 2.39 4 3 3 4 3 2 2 1 1 7 16 13916000 6254200 7661700 + 4355 62;60 4507 10117;10118;10119;10120;10121;10122;10123;10124;10125;10126;10127;10128;10129;10130;10131;10132;10133;10134;10135;10136;10137;10138;10139 8284;8285;8286;8287;8288;8289;8290;8291;8292;8293;8294;8295;8296;8297;8298;8299;8300;8301 8284 17 590170 2384500 FLEQQNQVLQTK KTLNNKFASFIDKVRFLEQQNQVLQTKWEL KVRFLEQQNQVLQTKWELLQQMNVGTRPIN R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1474.778 CON__P04264;P04264;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__ENSEMBL:ENSBTAP00000038253;CON__Q7Z794;Q7Z794 CON__P35908v2 198 209 KRT1;KRT2;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 2 2.6383E-34 268.91 By MS/MS By MS/MS 4.59 2.63 2 2 12 2 2 2 1 2 2 2 10 19 880250000 768490000 111760000 + 4356 55;471;45;34;72 4508 10140;10141;10142;10143;10144;10145;10146;10147;10148;10149;10150;10151;10152;10153;10154;10155;10156;10157;10158;10159;10160;10161;10162;10163;10164;10165;10166;10167;10168 8302;8303;8304;8305;8306;8307;8308;8309;8310;8311;8312;8313;8314;8315;8316;8317;8318;8319;8320;8321;8322;8323;8324;8325;8326;8327;8328;8329;8330;8331;8332;8333;8334;8335;8336;8337;8338;8339;8340;8341;8342;8343 8306 42 62442000 140410000 FLESLPEEEQQR KCDQKKKDYEVELLRFLESLPEEEQQRVLG LLRFLESLPEEEQQRVLGEEKMLNINKKQA R F L Q R V 0 1 0 0 0 2 4 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1503.7205 P17480 P17480 361 372 UBTF Nucleolar transcription factor 1 yes yes 2 1.2629E-07 203.02 By MS/MS 3.5 1.12 1 1 1 1 4 2621200 2621200 0 4357 641 4509 10169;10170;10171;10172 8344 8344 1 226810 0 FLESPDFQPNIAK AAWPHLQLVYEFFLRFLESPDFQPNIAKKY LRFLESPDFQPNIAKKYIDQKFVLALLDLF R F L A K K 1 0 1 1 0 1 1 0 0 1 1 1 0 2 2 1 0 0 0 0 0 0 13 0 1504.7562 Q13362;Q14738 Q14738 220 232 PPP2R5C;PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform no no 2 1.2271E-06 208.84 By MS/MS 6 0.816 1 1 1 3 2761000 2761000 0 4358 1373;1455 4510 10173;10174;10175 8345 8345 1 24405 0 FLFDSVSSQNVGLR LIDEDGNNQWPEGLKFLFDSVSSQNVGLRE KFLFDSVSSQNVGLREAALHIFWNFPGIFG K F L L R E 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 3 0 0 0 2 0 0 14 0 1567.7995 O00410 O00410 135 148 IPO5 Importin-5 yes yes 2 4.8692E-33 306.48 By MS/MS 4 0 1 1 686210 686210 0 4359 103 4511 10176 8346 8346 1 64577 0 FLFNSNT CVATVLTAGAYLCYRFLFNSNT________ AGAYLCYRFLFNSNT_______________ R F L N T - 0 0 2 0 0 0 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 7 0 841.39702 P18031 P18031 429 435 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 1 0.046724 107.74 By MS/MS 6 0 1 1 3728900 3728900 0 4360 649 4512 10177 8347 8347 0 25634 0 FLFSLFGQK IQTMCPIEGEGNIARFLFSLFGQKHNAVNA EGNIARFLFSLFGQKHNAVNATLIDSWVDI R F L Q K H 0 0 0 0 0 1 0 1 0 0 2 1 0 3 0 1 0 0 0 0 0 0 9 0 1085.591 Q13155 Q13155 216 224 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.0011517 132.08 By MS/MS 7.5 0.5 1 1 2 274010 274010 0 4361 1360 4513 10178;10179 8348 8348 1 4182.8 0 FLFTTGFHTK EAEEITMISIQLAARFLFTTGFHTKKVVRG QLAARFLFTTGFHTKKVVRGSASDWYDALC R F L T K K 0 0 0 0 0 0 0 1 1 0 1 1 0 3 0 0 3 0 0 0 0 0 10 0 1197.6182 Q93008;O00507 Q93008 2051 2060 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.00044964 134.26 By MS/MS 2 0 1 1 220870 220870 0 4362 2085 4514 10180 8349 8349 1 74709 0 FLGATTDTTVLEANAVLLGIQESK TRVRLRLLDLELTSRFLGATTDTTVLEANA VLEANAVLLGIQESKDSRSKEEHHEK____ R F L S K D 3 0 1 1 0 1 2 2 0 1 4 1 0 1 0 1 4 0 0 2 0 0 24 0 2490.3217 Q9Y2Q9 Q9Y2Q9 153 176 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.04468 55.208 By MS/MS 9 0 1 1 47520 47520 0 4363 2838 4515 10181 8350 8350 1 935.21 0 FLGCVDIKDLPVSEQQER QTIGNHASYYKDALRFLGCVDIKDLPVSEQ CVDIKDLPVSEQQERAFTLGLAGLLGEGVF R F L E R A 0 1 0 2 1 2 2 1 0 1 2 1 0 1 1 1 0 0 0 2 0 0 18 1 2132.0572 Q9UNM6 Q9UNM6 179 196 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 3 4.3645E-05 187.56 By MS/MS 7 0 1 1 2048300 2048300 0 4364 2791 4516 10182 8351 8351 1 32155 0 FLGDASEAYLK IYRTHADRLHNDLFKFLGDASEAYLKHFTK DLFKFLGDASEAYLKHFTKELKATTARCGL K F L L K H 2 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1212.6027 Q9HBF4 Q9HBF4 279 289 ZFYVE1 Zinc finger FYVE domain-containing protein 1 yes yes 2 0.0013996 113.62 By MS/MS 5 0 1 1 791720 791720 0 4365 2503 4517 10183 8352 8352 1 7940.5 0 FLGDEQDQITFVTR LVSCGMMEALLKVIKFLGDEQDQITFVTRA KFLGDEQDQITFVTRAVRVVDLITNLDMAA K F L T R A 0 1 0 2 0 2 1 1 0 1 1 0 0 2 0 0 2 0 0 1 0 0 14 0 1667.8155 Q7Z6Z7 Q7Z6Z7 418 431 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00045339 135.04 By MS/MS 2 0 1 1 70769 70769 0 4366 1802 4518 10184 8353 8353 1 23937 0 FLGTVEKEATFSNPK LPKGTVSFHSHSDHRFLGTVEKEATFSNPK FLGTVEKEATFSNPKTTSPNKGKEKEAEDG R F L P K T 1 0 1 0 0 0 2 1 0 0 1 2 0 2 1 1 2 0 0 1 0 0 15 1 1666.8566 O75534 O75534 428 442 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.00018359 209.25 By MS/MS 4.5 0.5 1 1 2 2183500 2183500 0 4367 333 4519 10185;10186 8354 8354 1 172260 0 FLHQDIDSGQGIR VRFVCNDDVYSGPLKFLHQDIDSGQGIRNT LKFLHQDIDSGQGIRNTYFEFETALACVPS K F L I R N 0 1 0 2 0 2 0 2 1 2 1 0 0 1 0 1 0 0 0 0 0 0 13 0 1484.7372 P11717 P11717 1053 1065 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 0.00073874 128.57 By MS/MS 1.67 0.471 1 2 3 1126600 1126600 0 4368 583 4520 10187;10188;10189 8355;8356;8357 8356 3 361990 0 FLICTDVAAR ERKQNLERFKKGDVRFLICTDVAARGIDIH KGDVRFLICTDVAARGIDIHGVPYVINVTL R F L A R G 2 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1164.5961 Q92499 Q92499 568 577 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.0068331 101.46 By MS/MS 4.5 0.5 1 1 2 4090700 4090700 0 4369 2046 4521 10190;10191 8358;8359 8359 2 219360 0 FLILPDMLK VAQLEQVYIRGSKIRFLILPDMLKNAPMLK RGSKIRFLILPDMLKNAPMLKSMKNKNQGS R F L L K N 0 0 0 1 0 0 0 0 0 1 3 1 1 1 1 0 0 0 0 0 0 0 9 0 1088.6304 P62318 P62318 70 78 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 2 0.0091907 101.33 By MS/MS 10 0 1 1 742480 742480 0 4370 1157 4522 10192 8360 8360 660 1 40017 0 FLINLEGGDIR EPREMTADVIELKGKFLINLEGGDIREESS LKGKFLINLEGGDIREESSYKVIVMPTTKE K F L I R E 0 1 1 1 0 0 1 2 0 2 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1245.6717 Q9NSE4 Q9NSE4 960 970 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 8.6106E-05 153.1 By MS/MS 4 0 1 1 283980 283980 0 4371 2570 4523 10193 8361 8361 1 26724 0 FLIQNVLR DVLKDVLLPWYNAYRFLIQNVLRLQKEEEI PWYNAYRFLIQNVLRLQKEEEIEFLYNENT R F L L R L 0 1 1 0 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 8 0 1001.6022 P41252 P41252 662 669 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 2.7056E-06 189.97 By MS/MS 2.5 1.12 1 1 1 1 4 4084900 4084900 0 4372 871 4524 10194;10195;10196;10197 8362;8363 8362 2 289900 0 FLKGDTTDLLK IQSTEEFENALKEMRFLKGDTTDLLKYARN KEMRFLKGDTTDLLKYARNINSHFANKKCQ R F L L K Y 0 0 0 2 0 0 0 1 0 0 3 2 0 1 0 0 2 0 0 0 0 0 11 1 1249.6918 O43264 O43264 380 390 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2;3 1.0079E-06 183.33 By MS/MS 4.5 0.5 2 2 4 12260000 12260000 0 4373 200 4525 10198;10199;10200;10201 8364;8365 8365 2 1097900 0 FLLADNLYCK YMQKKKESTNSMETRFLLADNLYCKASVPP SMETRFLLADNLYCKASVPPTDKVCLWLGA R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 P61758 P61758 105 114 VBP1 Prefoldin subunit 3 yes yes 2 1.3336E-05 174.41 By MS/MS 8.5 0.5 1 1 2 3355800 3355800 0 4374 1129 4526 10202;10203 8366;8367 8367 2 49334 0 FLLEYIAPMTEK DIHMNQIGFEREWHKFLLEYIAPMTEKLYP WHKFLLEYIAPMTEKLYPGYYTRAQFDLAF K F L E K L 1 0 0 0 0 0 2 0 0 1 2 1 1 1 1 0 1 0 1 0 0 0 12 0 1453.7527 Q02809 Q02809 615 626 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.047375 73.067 By MS/MS 5 0 1 1 55895 55895 0 4375 1280 4527 10204 8368 8368 0 560.6 0 FLLGYQPR FIPYFICACKELPGKFLLGYQPRGKPRIEY CKELPGKFLLGYQPRGKPRIEYVTVTPEGF K F L P R G 0 1 0 0 0 1 0 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 8 0 992.54435 Q7KZ85 Q7KZ85 1472 1479 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.012259 108.24 By MS/MS 2 0 1 1 108820 108820 0 4376 1754 4528 10205 8369 8369 1 36807 0 FLLSLPEHR EGLPKNPDLRIAQLRFLLSLPEHRGDAAVR RIAQLRFLLSLPEHRGDAAVRDELMAAVRD R F L H R G 0 1 0 0 0 0 1 0 1 0 3 0 0 1 1 1 0 0 0 0 0 0 9 0 1110.6186 Q15008 Q15008 24 32 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0019756 121.62 By MS/MS 7 0 1 1 1912500 1912500 0 4377 1471 4529 10206 8370 8370 1 30023 0 FLLVLADGLR GEPRGPLNHLYRELKFLLVLADGLRTGVTE YRELKFLLVLADGLRTGVTEWLEPLEAKSA K F L L R T 1 1 0 1 0 0 0 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 10 0 1115.6703 Q9H900 Q9H900 271 280 ZWILCH Protein zwilch homolog yes yes 2 0.0076518 107.15 By MS/MS 5 0 1 1 0 0 0 4378 2477 4530 10207 8371 8371 1 0 0 FLMSLVNQVPK DVLSGKVSADNTVGRFLMSLVNQVPKIVPD TVGRFLMSLVNQVPKIVPDDFETMLNSNIN R F L P K I 0 0 1 0 0 1 0 0 0 0 2 1 1 1 1 1 0 0 0 2 0 0 11 0 1274.7057 O00303 O00303 307 317 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 1.2313E-18 259.82 By MS/MS 6.5 0.5 2 2 4 16410000 16410000 0 4379 99 4531;4532 10208;10209;10210;10211 8372;8373;8374;8375 8375 61 4 185190 0 FLNAENAQK DFADECPKPELLAIRFLNAENAQKFKTKFE ELLAIRFLNAENAQKFKTKFEECRKEIEER R F L Q K F 2 0 2 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1033.5193 P43487 P43487 142 150 RANBP1 Ran-specific GTPase-activating protein yes yes 2 0.0019235 122.28 By MS/MS By matching 8.75 0.829 2 1 1 3 1 9859900 9823200 36736 4380 899 4533 10212;10213;10214;10215 8376;8377 8377 2 137120 49573 FLNDSEQVAR PAPDSPQEPLVLRLKFLNDSEQVARAWPHD VLRLKFLNDSEQVARAWPHDTIGSLKRTQF K F L A R A 1 1 1 1 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 10 0 1177.5728 Q9BVT8 Q9BVT8 109 118 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 yes yes 2 4.3874E-05 157.75 By MS/MS 8.5 0.5 1 1 2 1274700 1274700 0 4381 2340 4534 10216;10217 8378 8378 1 21002 0 FLNQIKVQEK EASTWLKNFKTTNERFLNQIKVQEKYVWNK TTNERFLNQIKVQEKYVWNKRESTEKGSPL R F L E K Y 0 0 1 0 0 2 1 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1245.7081 P51398 P51398 198 207 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.00091946 114.86 By MS/MS 7 0 1 1 2495700 2495700 0 4382 993 4535 10218 8379 8379 1 39178 0 FLPGYVGGIQEGAVTPAGVVNK FQVLLYTSLPDFCHKFLPGYVGGIQEGAVT GIQEGAVTPAGVVNKYQINGLQAWLLTHLL K F L N K Y 2 0 1 0 0 1 1 5 0 1 1 1 0 1 2 0 1 0 1 4 0 0 22 0 2172.1579 Q9UBM7 Q9UBM7 121 142 DHCR7 7-dehydrocholesterol reductase yes yes 2 1.08E-09 223.68 By MS/MS 7 0 1 1 1515600 1515600 0 4383 2701 4536 10219 8380 8380 1 23793 0 FLQDTIEEMALK ERLKKELRVKLELAKFLQDTIEEMALKNKA LAKFLQDTIEEMALKNKAAKGSATKDFSVF K F L L K N 1 0 0 1 0 1 2 0 0 1 2 1 1 1 0 0 1 0 0 0 0 0 12 0 1436.7221 O95202 O95202 263 274 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 2.2119E-12 227.94 By MS/MS 4.5 0.5 1 1 2 953750 953750 0 4384 394 4537 10220;10221 8381;8382 8382 2 16586 0 FLQDYDIR DYTVSLDSDMDDASKFLQDYDIRTGNTREA DMDDASKFLQDYDIRTGNTREALSPCPSTV K F L I R T 0 1 0 2 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1068.524 Q08AD1 Q08AD1 657 664 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.055306 80.455 By MS/MS 2 0 1 1 269170 269170 0 4385 1314 4538 10222 8383 8383 1 91043 0 FLQDYFDGNLKR VMQEEFSRDGKALERFLQDYFDGNLKRYLK LERFLQDYFDGNLKRYLKSEPIPESNDGPV R F L K R Y 0 1 1 2 0 1 0 1 0 0 2 1 0 2 0 0 0 0 1 0 0 0 12 1 1514.7518 P30101 P30101 352 363 PDIA3 Protein disulfide-isomerase A3 yes yes 3 0.022316 78.548 By MS/MS 6 0 1 1 2339100 2339100 0 4386 768 4539 10223 8384 8384 1 16080 0 FLQEFYQDDELGK MALKDYALEKEKVKKFLQEFYQDDELGKKQ KKFLQEFYQDDELGKKQFKYGNQLVRLAHR K F L G K K 0 0 0 2 0 2 2 1 0 0 2 1 0 2 0 0 0 0 1 0 0 0 13 0 1630.7515 P33993 P33993 16 28 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.0013829 119.21 By MS/MS 4.5 0.5 1 1 2 600200 600200 0 4387 808 4540 10224;10225 8385 8385 1 15456 0 FLQEFYQDDELGKK MALKDYALEKEKVKKFLQEFYQDDELGKKQ KFLQEFYQDDELGKKQFKYGNQLVRLAHRE K F L K K Q 0 0 0 2 0 2 2 1 0 0 2 2 0 2 0 0 0 0 1 0 0 0 14 1 1758.8465 P33993 P33993 16 29 MCM7 DNA replication licensing factor MCM7 yes yes 2 1.3975E-06 205.31 By MS/MS 5.5 0.5 1 1 2 2753800 2753800 0 4388 808 4541 10226;10227 8386;8387 8387 2 24984 0 FLQEHLAPK GLSEEQRQLRQTMAKFLQEHLAPKAQEIDR RQTMAKFLQEHLAPKAQEIDRSNEFKNLRE K F L P K A 1 0 0 0 0 1 1 0 1 0 2 1 0 1 1 0 0 0 0 0 0 0 9 0 1081.592 P26440 P26440 59 67 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.028414 76.221 By MS/MS 7 0 1 1 370920 370920 0 4389 732 4542 10228 8388 8388 1 5822.8 0 FLQFAYFK SREVLADFQRREPYKFLQFAYFKANNLPKA QRREPYKFLQFAYFKANNLPKAIAAAHTFL K F L F K A 1 0 0 0 0 1 0 0 0 0 1 1 0 3 0 0 0 0 1 0 0 0 8 0 1062.5539 O75718 O75718 150 157 CRTAP Cartilage-associated protein yes yes 2 0.040357 97.071 By MS/MS 7 0 1 1 0 0 0 4390 343 4543 10229 8389 8389 1 0 0 FLQFVTGTSK FWRALRSFDQADRAKFLQFVTGTSKVPLQG ADRAKFLQFVTGTSKVPLQGFAALEGMNGI K F L S K V 0 0 0 0 0 1 0 1 0 0 1 1 0 2 0 1 2 0 0 1 0 0 10 0 1126.6023 Q7Z6Z7 Q7Z6Z7 4296 4305 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.008605 97.472 By MS/MS 2 0 1 1 43565 43565 0 4391 1802 4544 10230 8390 8390 1 14735 0 FLQILQR DLHKCIARCHFARSRFLQILQRQDCVTQKY RCHFARSRFLQILQRQDCVTQKYQENAQLS R F L Q R Q 0 1 0 0 0 2 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 7 0 916.54944 Q7Z4H7 Q7Z4H7 176 182 HAUS6 HAUS augmin-like complex subunit 6 yes yes 2 0.041861 95.793 By MS/MS 4 0 1 1 465540 465540 0 4392 1792 4545 10231 8391 8391 1 43811 0 FLQLESLQELMK CIKQCDPEKMITESKFLQLESLQELMKALV ESKFLQLESLQELMKALVSVTPDEETYDEE K F L M K A 0 0 0 0 0 2 2 0 0 0 4 1 1 1 0 1 0 0 0 0 0 0 12 0 1477.7851 Q92538 Q92538 1125 1136 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 5.3647E-06 185.99 By MS/MS 2 0 1 1 79710 79710 0 4393 2050 4546 10232 8392;8393 8392 988 2 26961 0 FLQPVQK ATRGPQVQQPPPSNRFLQPVQKIDMNLTDL QQPPPSNRFLQPVQKIDMNLTDLLGELQRD R F L Q K I 0 0 0 0 0 2 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 7 0 858.49634 Q15436 Q15436 229 235 SEC23A Protein transport protein Sec23A yes yes 2 0.043355 94.669 By MS/MS 5 0 1 1 765820 765820 0 4394 1513 4547 10233 8394 8394 1 7680.8 0 FLQQEQSVFR RRRMKLRDLMEAAFKFLQQEQSVFRELWDW EAAFKFLQQEQSVFRELWDWSVCVPLLRSH K F L F R E 0 1 0 0 0 3 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 10 0 1280.6513 Q9NU22 Q9NU22 155 164 MDN1 Midasin yes yes 2 0.025938 93.598 By MS/MS 1 0 1 1 0 0 0 4395 2580 4548 10234 8395 8395 1 0 0 FLRENPYYDSR ALAKIYIDSNNNPERFLRENPYYDSRVVGK NPERFLRENPYYDSRVVGKYCEKRDPHLAC R F L S R V 0 2 1 1 0 0 1 0 0 0 1 0 0 1 1 1 0 0 2 0 0 0 11 1 1458.6892 Q00610 Q00610 893 903 CLTC Clathrin heavy chain 1 yes yes 3 0.0058108 92.866 By MS/MS 2.5 1.12 1 1 1 1 4 1642300 1642300 0 4396 1262 4549 10235;10236;10237;10238 8396;8397 8396 2 231800 0 FLRPHYGK RSSTTSMTSVPKPLKFLRPHYGKLKEIYEN SVPKPLKFLRPHYGKLKEIYENMAPGENKR K F L G K L 0 1 0 0 0 0 0 1 1 0 1 1 0 1 1 0 0 0 1 0 0 0 8 1 1016.5556 Q13200 Q13200 98 105 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.049513 83.753 By MS/MS 4 0 1 1 524960 524960 0 4397 1365 4550 10239 8398 8398 1 49402 0 FLSAEEYQQK NAGAVVLTPLFKVGKFLSAEEYQQKIIPVV FKVGKFLSAEEYQQKIIPVVVKMFSSTDRA K F L Q K I 1 0 0 0 0 2 2 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 10 0 1241.5928 Q96KG9 Q96KG9 340 349 SCYL1 N-terminal kinase-like protein yes yes 2 1.4691E-07 187.22 By MS/MS 4 0 1 1 2861300 2861300 0 4398 2188 4551 10240 8399 8399 1 269270 0 FLSAVLAAQK RERRFEIPDEEHCLKFLSAVLAAQKAQSQL EHCLKFLSAVLAAQKAQSQLLVPEQKDSSS K F L Q K A 3 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1046.6124 Q01968 Q01968 107 116 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.0081116 98.582 By MS/MS 4 0 1 1 874240 874240 0 4399 1273 4552 10241 8400 8400 1 82272 0 FLSDPQVHTVLVER EAALEEKSALEQMRKFLSDPQVHTVLVERS KFLSDPQVHTVLVERSTLKEDVGDEGEEEK K F L E R S 0 1 0 1 0 1 1 0 1 0 2 0 0 1 1 1 1 0 0 3 0 0 14 0 1638.873 Q14204 Q14204 68 81 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00048367 141.73 By MS/MS 1 0 1 1 209750 209750 0 4400 1433 4553 10242 8401 8401 1 50542 0 FLSPEFIPR PVIVDKHRPVEPERRFLSPEFIPRRGRTDP VEPERRFLSPEFIPRRGRTDPLKFQIERKD R F L P R R 0 1 0 0 0 0 1 0 0 1 1 0 0 2 2 1 0 0 0 0 0 0 9 0 1104.5968 P49406 P49406 75 83 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.01534 91.069 By MS/MS 9 0.816 1 1 1 3 9726400 9726400 0 4401 948 4554 10243;10244;10245 8402 8402 1 127520 0 FLSQLLER GLFPCVDELSDIHTRFLSQLLERRRQALCP LSDIHTRFLSQLLERRRQALCPGSTRNFVI R F L E R R 0 1 0 0 0 1 1 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 8 0 1004.5655 Q92974 Q92974 293 300 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.02386 95.358 By MS/MS 4 0 1 1 551440 551440 0 4402 2083 4555 10246 8403 8403 1 51894 0 FLSSAAAVSK GAAMNVAYTDGDLERFLSSAAAVSKEHPVV GDLERFLSSAAAVSKEHPVVISKFIQEAKE R F L S K E 3 0 0 0 0 0 0 0 0 0 1 1 0 1 0 3 0 0 0 1 0 0 10 0 979.53385 P27708 P27708 1110 1119 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.00033073 137.05 By MS/MS 2 0.816 1 1 1 3 2409200 2409200 0 4403 745 4556 10247;10248;10249 8404 8404 1 675150 0 FLSVLERQ AAFEEPELLAQDIRKFLSVLERQ_______ LAQDIRKFLSVLERQ_______________ K F L R Q - 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 8 1 990.54983 P07099 P07099 448 455 EPHX1 Epoxide hydrolase 1 yes yes 2 0.0074876 141.39 By MS/MS 7 0 1 1 558500 558500 0 4404 505 4557 10250 8405 8405 1 8767.5 0 FLTFDSPEGK PYDLERPLETDSDLRFLTFDSPEGKAVFWH DSDLRFLTFDSPEGKAVFWHSSTHVLGAAA R F L G K A 0 0 0 1 0 0 1 1 0 0 1 1 0 2 1 1 1 0 0 0 0 0 10 0 1139.5499 Q9BW92 Q9BW92 119 128 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0013411 124.92 By MS/MS 6 1.41 1 1 1 1 1 5 13783000 13783000 0 4405 2346 4558 10251;10252;10253;10254;10255 8406;8407 8406 2 175730 0 FLTKGDNNAVDDR HRVLKIHEKQNGHIKFLTKGDNNAVDDRGL IKFLTKGDNNAVDDRGLYKQGQHWLEKKDV K F L D R G 1 1 2 3 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 13 1 1463.7005 P67812;P0C7V7 P67812 111 123 SEC11A;SEC11B Signal peptidase complex catalytic subunit SEC11A;Putative signal peptidase complex catalytic subunit SEC11B yes no 2;3 0.0077606 112.84 By MS/MS 9 0 2 2 682450 682450 0 4406 1207 4559 10256;10257 8408;8409 8409 2 13431 0 FLTQPQVVAR AYGAAKAGGSFDLRRFLTQPQVVARAVCLV FDLRRFLTQPQVVARAVCLVFALIVFSCIY R F L A R A 1 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 10 0 1157.6557 O43760 O43760 20 29 SYNGR2 Synaptogyrin-2 yes yes 2 0.0068331 101.46 By MS/MS 9 0.816 1 1 1 3 2403800 2403800 0 4407 233 4560 10258;10259;10260 8410 8410 1 40986 0 FLTSQQLFK DFDVRVDTQDQGMYRFLTSQQLFKLLDCLL DQGMYRFLTSQQLFKLLDCLLESHRFAKAF R F L F K L 0 0 0 0 0 2 0 0 0 0 2 1 0 2 0 1 1 0 0 0 0 0 9 0 1110.6073 Q9Y6D6 Q9Y6D6 1673 1681 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.037545 80.165 By MS/MS 3 0.816 1 1 1 3 502730 502730 0 4408 2941 4561 10261;10262;10263 8411 8411 1 116070 0 FLTVMMK KRQVLIRPCSKVIVRFLTVMMKHGYIGEFE PCSKVIVRFLTVMMKHGYIGEFEIIDDHRA R F L M K H 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 0 1 0 0 1 0 0 7 0 868.45507 P62244 P62244 37 43 RPS15A 40S ribosomal protein S15a yes yes 2 0.024338 108.98 By MS/MS 10 0 2 2 2322800 2322800 0 4409 1144 4562;4563 10264;10265 8412;8413 8413 645;646 2 125190 0 FLVDSSK HKIKILGSEGEPAFRFLVDSSKKEPRWNFW SEGEPAFRFLVDSSKKEPRWNFWKYLVNPE R F L S K K 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 1 0 0 7 0 794.41742 Q8TED1 Q8TED1 153 159 GPX8 Probable glutathione peroxidase 8 yes yes 2 0.048731 90.777 By MS/MS 9 0 1 1 264420 264420 0 4410 2000 4564 10266 8414 8414 1 5203.8 0 FLVGFTNK LFVKGEDFPANNIVKFLVGFTNKGTEDFIV PANNIVKFLVGFTNKGTEDFIVESLDASFR K F L N K G 0 0 1 0 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 8 0 924.5069 P43307 P43307 103 110 SSR1 Translocon-associated protein subunit alpha yes yes 2 0.010393 110.31 By MS/MS 8 0.816 1 1 1 3 17420000 17420000 0 4411 895 4565 10267;10268;10269 8415 8415 1 263510 0 FLVTVIK IGSISGAMHEEDEKRFLVTVIKDLLGLCEQ MHEEDEKRFLVTVIKDLLGLCEQKRGKDNK R F L I K D 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 2 0 0 7 0 818.52658 O14980 O14980 516 522 XPO1 Exportin-1 yes yes 2 0.01405 124.89 By MS/MS 4 0 1 1 785070 785070 0 4412 153 4566 10270 8416 8416 1 73880 0 FLWESYR TQDRTDRLLLTPWVKFLWESYRQCLDLLRN LLLTPWVKFLWESYRQCLDLLRNNSRVERL K F L Y R Q 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 7 0 999.48142 Q14152 Q14152 152 158 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.027749 106.42 By MS/MS 5 2 1 1 1 1 1 1 1 7 2402000 2402000 0 4413 1422 4567 10271;10272;10273;10274;10275;10276;10277 8417;8418 8418 2 95928 0 FLYFLPASEEK KRLEEVLAIRTIHEKFLYFLPASEEKIICL IHEKFLYFLPASEEKIICLTRVFEPFTGLN K F L E K I 1 0 0 0 0 0 2 0 0 0 2 1 0 2 1 1 0 0 1 0 0 0 11 0 1342.6809 Q8NCM8 Q8NCM8 344 354 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.026422 82.287 By MS/MS 1.5 0.5 1 1 2 170800 170800 0 4414 1952 4568 10278;10279 8419;8420;8421 8421 3 50498 0 FMEPYIFGSR DARVHLGHKAGCRHRFMEPYIFGSRLDHDI GCRHRFMEPYIFGSRLDHDIIDLEQTATHL R F M S R L 0 1 0 0 0 0 1 1 0 1 0 0 1 2 1 1 0 0 1 0 0 0 10 0 1245.5852 Q9Y399 Q9Y399 101 110 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0051735 105.2 By MS/MS 8 0 1 1 473650 473650 0 4415 2860 4569 10280 8422 8422 1 5979.8 0 FMQTFVLAPEGSVANK QVMGLLSNNNQALRRFMQTFVLAPEGSVAN MQTFVLAPEGSVANKFYVHNDIFRYQDEVF R F M N K F 2 0 1 0 0 1 1 1 0 0 1 1 1 2 1 1 1 0 0 2 0 0 16 0 1737.876 Q13283 Q13283 108 123 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 4.7427E-07 211.83 By MS/MS 5 0 2 2 1424500 1424500 0 4416 1368 4570;4571 10281;10282 8423;8424 8423 798 2 14287 0 FMRDPIR LSATMPSDVLEVTKKFMRDPIRILVKKEEL DVLEVTKKFMRDPIRILVKKEELTLEGIRQ K F M I R I 0 2 0 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 7 1 933.48546 P60842;Q14240 P60842 227 233 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 3 0.05128 79.469 By MS/MS 7 0.816 1 1 1 3 41061000 41061000 0 4417 1097 4572 10283;10284;10285 8425 8425 1 297110 0 FMYCTPFTLDGR KDRITYFDKNYNLRRFMYCTPFTLDGRAHG LRRFMYCTPFTLDGRAHGELHEQFKRKTIL R F M G R A 0 1 0 1 1 0 0 1 0 0 1 0 1 2 1 0 2 0 1 0 0 0 12 0 1506.6636 Q96N67 Q96N67 1941 1952 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0010304 123.96 By MS/MS 2 0 1 1 131570 131570 0 4418 2201 4573 10286 8426 8426 1029 1 44504 0 FNADEFEDMVAEK GRQKIHISKKWGFTKFNADEFEDMVAEKRL TKFNADEFEDMVAEKRLIPDGCGVKYIPNR K F N E K R 2 0 1 2 0 0 3 0 0 0 0 1 1 2 0 0 0 0 0 1 0 0 13 0 1543.6501 P27635 P27635 176 188 RPL10 60S ribosomal protein L10 yes yes 2 1.6214E-13 248.19 By MS/MS 8.67 0.471 1 2 3 1112300 1112300 0 4419 743 4574;4575 10287;10288;10289 8427;8428 8427 370 2 19426 0 FNASQLITQR LPSIVNEVLKSVVAKFNASQLITQRAQVSL SVVAKFNASQLITQRAQVSLLIRRELTERA K F N Q R A 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 10 0 1176.6251 Q99623 Q99623 148 157 PHB2 Prohibitin-2 yes yes 2 2.6843E-27 275.63 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 155370000 155080000 283040 4420 2254 4576 10290;10291;10292;10293;10294;10295 8429;8430;8431;8432;8433 8432 5 2174100 457290 FNDALTVVER GRLAEYFIGDVFAARFNDALTVVERLVKVT VFAARFNDALTVVERLVKVTLYGSQIKLYN R F N E R L 1 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 10 0 1162.5982 Q96QU8 Q96QU8 580 589 XPO6 Exportin-6 yes yes 2 0.0010479 122.69 By MS/MS 3.5 0.5 1 1 2 739550 739550 0 4421 2218 4577 10296;10297 8434;8435 8434 2 38815 0 FNDGSDEKKK GKTSIAIDTIINQKRFNDGSDEKKKLYCIY INQKRFNDGSDEKKKLYCIYVAIGQKRSTV R F N K K L 0 0 1 2 0 0 1 1 0 0 0 3 0 1 0 1 0 0 0 0 0 0 10 2 1166.5568 P25705 P25705 232 241 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 1.419E-09 200.56 By MS/MS 6.8 0.748 2 2 1 5 2949200 2949200 0 4422 723 4578 10298;10299;10300;10301;10302 8436;8437;8438 8436 3 27045 0 FNDILGR LYGYIDKYNIELDPRFNDILGRHSRKRWER YNIELDPRFNDILGRHSRKRWERFVHSENQ R F N G R H 0 1 1 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 833.43955 Q8NEV1;P68400 Q8NEV1 269 275 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 2 0.018281 113.89 By MS/MS 7 0 1 1 1459800 1459800 0 4423 1213 4579 10303 8439 8439 1 22916 0 FNDYFEFPR LKRFDYDWERECAIKFNDYFEFPRELDMEP RECAIKFNDYFEFPRELDMEPYTVAGVAKL K F N P R E 0 1 1 1 0 0 1 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 9 0 1233.5455 Q93008;O00507 Q93008 1812 1820 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0014918 127.76 By MS/MS 2 0 1 1 166010 166010 0 4424 2085 4580 10304 8440 8440 1 56152 0 FNESSQKLDLLK GKVTDRKALSEAQARFNESSQKLDLLKYSL QARFNESSQKLDLLKYSLEQRLNEVPKNHP R F N L K Y 0 0 1 1 0 1 1 0 0 0 3 2 0 1 0 2 0 0 0 0 0 0 12 1 1420.7562 Q16513 Q16513 261 272 PKN2 Serine/threonine-protein kinase N2 yes yes 3 0.031477 69.451 By MS/MS By matching 3.33 0.471 2 1 2 1 900500 684080 216420 4425 1547 4581 10305;10306;10307 8441 8441 1 52787 27547 FNEVAAQYSEDK GKIMEAMEKLKSGMRFNEVAAQYSEDKARQ GMRFNEVAAQYSEDKARQGGDLGWMTRGSM R F N D K A 2 0 1 1 0 1 2 0 0 0 0 1 0 1 0 1 0 0 1 1 0 0 12 0 1399.6256 Q9Y237 Q9Y237 64 75 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 2 0.00021647 149.41 By MS/MS 10 0 1 1 238650 238650 0 4426 2811 4582 10308 8442;8443 8442 2 12862 0 FNFACLEAR VPSGMLSVLGQPQSKFNFACLEAREHCKSL GQPQSKFNFACLEAREHCKSLGIENPVCEV K F N A R E 2 1 1 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 9 0 1126.523 Q8IVS2 Q8IVS2 204 212 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 8.8451E-06 179.37 By MS/MS 7 0 1 1 1694000 1694000 0 4427 1863 4583 10309 8444 8444 1 26593 0 FNHWELK RVRADLRDNYSPGWKFNHWELKGVPIRLEV DNYSPGWKFNHWELKGVPIRLEVGPRDMKS K F N L K G 0 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 7 0 972.48175 P07814 P07814 1355 1361 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.017373 110.31 By MS/MS 3 0 2 2 2048200 2048200 0 4428 512 4584 10310;10311 8445;8446 8445 2 37477 0 FNIPDLK HAATSKNNNLAVTSKFNIPDLKVGTLDVLV NNLAVTSKFNIPDLKVGTLDVLVGLSDELA K F N L K V 0 0 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 7 0 845.4647 P21283 P21283 38 44 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 2 0.045075 93.374 By MS/MS 7 0 1 1 601200 601200 0 4429 676 4585 10312 8447 8447 1 9437.8 0 FNISTDRR DTKSKVTLLEGDHVRFNISTDRRDKLERAT LEGDHVRFNISTDRRDKLERATNIEVLSNT R F N R R D 0 2 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 8 1 1007.5148 O75534 O75534 318 325 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.015654 129.68 By MS/MS 5 0.816 1 1 1 3 3015900 3015900 0 4430 333 4586 10313;10314;10315 8448 8448 1 169500 0 FNLMQVGR QYGIISDAPINEVARFNLMQVGRLLQQLAM PINEVARFNLMQVGRLLQQLAMTGSEEGDP R F N G R L 0 1 1 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 8 0 963.49602 Q14C86 Q14C86 339 346 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.012425 107.59 By MS/MS 2 0 2 2 399670 399670 0 4431 1466 4587;4588 10316;10317 8449;8450 8449 861 2 135190 0 FNPDGEEEDVTVQE ENAESEADFSIHFNRFNPDGEEEDVTVQE_ RFNPDGEEEDVTVQE_______________ R F N Q E - 0 0 1 2 0 1 4 1 0 0 0 0 0 1 1 0 1 0 0 2 0 0 14 0 1606.6635 Q5SW79 Q5SW79 1571 1584 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.00091324 126.76 By MS/MS 2 0 1 1 326240 326240 0 4432 1623 4589 10318 8451 8451 1 110350 0 FNPFVTSDR ______________________________ ______________________________ K F N D R S 0 1 1 1 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 1 0 0 9 0 1081.5193 P61254;Q9UNX3 P61254 3 11 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.015066 90.15 By MS/MS 9 0 1 1 943660 943660 0 4433 1119;2794 4590 10319 8452 8452 1 18571 0 FNQVLDQFGEK YFLLTQAVRTGNLAKFNQVLDQFGEKFQAD NLAKFNQVLDQFGEKFQADGTYTLIIRLRH K F N E K F 0 0 1 1 0 2 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 0 11 0 1323.6459 O43242 O43242 375 385 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 1.8107E-05 165.63 By MS/MS 4.2 2.32 1 1 1 1 1 5 10893000 10893000 0 4434 198 4591 10320;10321;10322;10323;10324 8453;8454;8455 8455 3 130120 0 FNTANDDNVTQVR SALEHSIQYSGEVRRFNTANDDNVTQVRAF RRFNTANDDNVTQVRAFYVNVLNEEQRKRL R F N V R A 1 1 3 2 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 2 0 0 13 0 1492.6906 P04040 P04040 432 444 CAT Catalase yes yes 2 1.531E-28 259.75 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 2373700 0 2373700 4435 464 4592 10325;10326;10327;10328;10329;10330;10331;10332;10333;10334 8456;8457;8458;8459;8460;8461;8462;8463;8464;8465 8458 10 0 1713300 FNTGPVGK QIRMCKDLKHLIYYRFNTGPVGKGPGCGFW KHLIYYRFNTGPVGKGPGCGFWAAGWRVWL R F N G K G 0 0 1 0 0 0 0 2 0 0 0 1 0 1 1 0 1 0 0 1 0 0 8 0 818.42865 Q6P2Q9 Q6P2Q9 616 623 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.018484 101.33 By MS/MS 2 0.816 1 1 1 3 1836500 1836500 0 4436 1708 4593 10335;10336;10337 8466 8466 1 540000 0 FNTTSVIK EPRGNEEAQIFRPLKFNTTSVIKIAVEPVN QIFRPLKFNTTSVIKIAVEPVNPSELPKML K F N I K I 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 8 0 908.49673 Q15029 Q15029 582 589 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0073734 114.5 By MS/MS 4 0.816 1 1 1 3 1378700 1378700 0 4437 1476 4594 10338;10339;10340 8467 8467 1 81531 0 FNVEDGEIVQQVR WALGVVPFSHVNIVKFNVEDGEIVQQVRVS VKFNVEDGEIVQQVRVSTPWLQHLSGACGV K F N V R V 0 1 1 1 0 2 2 1 0 1 0 0 0 1 0 0 0 0 0 3 0 0 13 0 1531.7631 Q8N766 Q8N766 202 214 EMC1 ER membrane protein complex subunit 1 yes yes 2 2.7351E-24 280.38 By MS/MS 2.5 1.12 1 1 1 1 4 2817600 2817600 0 4438 1931 4595 10341;10342;10343;10344 8468;8469;8470 8468 3 497960 0 FNVLQYVVPEVK QAPPTRIGLINDMVRFNVLQYVVPEVKDLY MVRFNVLQYVVPEVKDLYNWLEVEFNPLKL R F N V K D 0 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 4 0 0 12 0 1433.7919 Q14152 Q14152 377 388 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00038501 158.41 By MS/MS 4 1.41 1 1 1 1 1 5 1379900 1379900 0 4439 1422 4596 10345;10346;10347;10348;10349 8471;8472;8473;8474;8475;8476;8477 8475 7 50224 0 FNVTGTPEQYVPYSTTR TKPLTARKFIWTNHKFNVTGTPEQYVPYST VTGTPEQYVPYSTTRKKIQEWIPPSTPYK_ K F N T R K 0 1 1 0 0 1 1 1 0 0 0 0 0 1 2 1 4 0 2 2 0 0 17 0 1958.9374 Q9UI09 Q9UI09 115 131 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 0.00040188 167.73 By MS/MS 10 0 1 1 235750 235750 0 4440 2733 4597 10350 8478 8478 1 12706 0 FNVWDTAGQEK EVHPLVFHTNRGPIKFNVWDTAGQEKFGGL GPIKFNVWDTAGQEKFGGLRDGYYIQAQCA K F N E K F 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 0 0 11 0 1293.599 P62826 P62826 61 71 RAN GTP-binding nuclear protein Ran yes yes 2 0.00057028 152.64 By MS/MS 8.5 0.5 1 1 2 1776000 1776000 0 4441 1172 4598 10351;10352 8479;8480 8479 2 25362 0 FNVWDVGGQDK TVGFNVETVTYKNVKFNVWDVGGQDKIRPL KNVKFNVWDVGGQDKIRPLWRHYYTGTQGL K F N D K I 0 0 1 2 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 2 0 0 11 0 1263.5884 P62330 P62330 59 69 ARF6 ADP-ribosylation factor 6 yes yes 2 0.0023447 110.93 By MS/MS 9.5 0.5 1 1 2 455150 455150 0 4442 1158 4599 10353;10354 8481;8482 8481 2 14967 0 FNYGFEYLGVQDK TDVLQQLSIQMANAKFNYGFEYLGVQDKLV AKFNYGFEYLGVQDKLVQTPLTDRCYLTMT K F N D K L 0 0 1 1 0 1 1 2 0 0 1 1 0 2 0 0 0 0 2 1 0 0 13 0 1578.7355 Q14204 Q14204 1866 1878 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 6.8875E-08 217.09 By MS/MS 1.5 0.5 1 1 2 522190 522190 0 4443 1433 4600 10355;10356 8483;8484 8483 2 147320 0 FPAVNSLIQR MLKSIHSKMNTLANRFPAVNSLIQRINLRK TLANRFPAVNSLIQRINLRKRRDSLILGGV R F P Q R I 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1143.64 O95249 O95249 212 221 GOSR1 Golgi SNAP receptor complex member 1 yes yes 2 0.016783 88.37 By MS/MS 8 0 1 1 192310 192310 0 4444 399 4601 10357 8485 8485 1 2427.9 0 FPDENFTLK TNHNGTGGKSIYGSRFPDENFTLKHVGPGV SIYGSRFPDENFTLKHVGPGVLSMANAGPN R F P L K H 0 0 1 1 0 0 1 0 0 0 1 1 0 2 1 0 1 0 0 0 0 0 9 0 1109.5393 P30405 P30405 125 133 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.011061 98.582 By MS/MS 9.5 0.5 1 1 2 490910 490910 0 4445 772 4602 10358;10359 8486 8486 1 14770 0 FPEILQK LDHEKEWKLGRCILRFPEILQKILDDLFLH KLGRCILRFPEILQKILDDLFLHTLCDYIY R F P Q K I 0 0 0 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 7 0 873.496 P54136 P54136 581 587 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.016101 119.56 By MS/MS 5 0 1 1 2247800 2247800 0 4446 1043 4603 10360 8487 8487 1 22544 0 FPGQLNADLR HLVSATMSGVTTCLRFPGQLNADLRKLAVN TTCLRFPGQLNADLRKLAVNMVPFPRLHFF R F P L R K 1 1 1 1 0 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 10 0 1129.588 P04350;P68371;Q3ZCM7;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 242 251 TUBB4A;TUBB4B;TUBB8;TUBB1;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2 8.6476E-05 154.85 By MS/MS By MS/MS 6.14 1.46 1 3 2 1 5 2 177450000 176870000 575240 4447 1212;509;1412;2331;472;1393;2324 4604 10361;10362;10363;10364;10365;10366;10367 8488;8489;8490;8491;8492;8493;8494;8495;8496;8497;8498;8499;8500;8501 8492 14 1382900 629470 FPGQLNADLRK HLVSATMSGVTTCLRFPGQLNADLRKLAVN TCLRFPGQLNADLRKLAVNMVPFPRLHFFM R F P R K L 1 1 1 1 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 11 1 1257.683 P04350;P68371;Q3ZCM7;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 242 252 TUBB4A;TUBB4B;TUBB8;TUBB1;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2;3 0.00012886 157.34 By MS/MS 7 0.816 2 2 2 6 57192000 57192000 0 4448 1212;509;1412;2331;472;1393;2324 4605 10368;10369;10370;10371;10372;10373 8502;8503;8504;8505 8502 4 435950 0 FPHLAEAQK KENLERKKAKILLKKFPHLAEAQKSSLV__ KILLKKFPHLAEAQKSSLV___________ K F P Q K S 2 0 0 0 0 1 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 9 0 1039.5451 Q9HD33 Q9HD33 238 246 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 3 0.021944 104.44 By MS/MS 9 0 1 1 146980 146980 0 4449 2518 4606 10374 8506 8506 1 2892.6 0 FPHSAHQK AMPFKCMQLTDFILKFPHSAHQKYVRQAWQ LTDFILKFPHSAHQKYVRQAWQKADINTKW K F P Q K Y 1 0 0 0 0 1 0 0 2 0 0 1 0 1 1 1 0 0 0 0 0 0 8 0 950.47225 P50914 P50914 64 71 RPL14 60S ribosomal protein L14 yes yes 3 0.018122 98.299 By MS/MS 8 0 1 1 313620 313620 0 4450 983 4607 10375 8507 8507 1 3959.4 0 FPLSNQNMLLR KLDKFSGTLYWKENKFPLSNQNMLLRGCVL KENKFPLSNQNMLLRGCVLRNTEWCFGLVI K F P L R G 0 1 2 0 0 1 0 0 0 0 3 0 1 1 1 1 0 0 0 0 0 0 11 0 1331.702 P98198 P98198 241 251 ATP8B2 Phospholipid-transporting ATPase ID yes yes 3 0.038976 65.627 By MS/MS 3 0 1 1 0 0 0 4451 1255 4608 10376 8508 8508 751 1 0 0 FPQLDSTSFANSR TTVGSAEKRAYLQARFPQLDSTSFANSRDT ARFPQLDSTSFANSRDTSFEQHVLWHTGGK R F P S R D 1 1 1 1 0 1 0 0 0 0 1 0 0 2 1 3 1 0 0 0 0 0 13 0 1468.6947 P49327 P49327 1712 1724 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.4975E-05 202 By MS/MS By matching 2.86 1.25 1 2 2 1 1 6 1 19861000 19751000 110320 4452 946 4609 10377;10378;10379;10380;10381;10382;10383 8509;8510;8511;8512;8513;8514;8515 8511 7 4405900 156010 FPQVFNTR FVHNVMSIPHHIIVKFPQVFNTRLFKVKER PHHIIVKFPQVFNTRLFKVKERHLFLTYLG K F P T R L 0 1 1 0 0 1 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 8 0 1007.5189 Q96E29 Q96E29 351 358 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.035448 87.181 By MS/MS 7 0 1 1 0 0 0 4453 2141 4610 10384 8516 8516 1 0 0 FPSNIIVTNGAAR PGPGPSHPAQPKAPRFPSNIIVTNGAAREP PRFPSNIIVTNGAAREPRRTLSRAAVSVQE R F P A R E 2 1 2 0 0 0 0 1 0 2 0 0 0 1 1 1 1 0 0 1 0 0 13 0 1358.7306 Q86WR7 Q86WR7 253 265 PROSER2 Proline and serine-rich protein 2 yes yes 2 0.0086986 95.483 By MS/MS By MS/MS 7.67 0.471 1 2 1 2 679190 63545 615650 4454 1839 4611 10385;10386;10387 8517;8518 8518 2 802.24 949710 FPSSGPVTPQPTALTFAK ITKGTQSLPTASASKFPSSGPVTPQPTALT SGPVTPQPTALTFAKSSWARQESLQERKQA K F P A K S 2 0 0 0 0 1 0 1 0 0 1 1 0 2 4 2 3 0 0 1 0 0 18 0 1844.9672 Q9Y679 Q9Y679 360 377 AUP1 Ancient ubiquitous protein 1 yes yes 2 6.6109E-34 309.26 By MS/MS 7 0 1 1 4107800 4107800 0 4455 2934 4612 10388 8519;8520;8521;8522 8519 4 64486 0 FQASGLIVK GSNRLQELVDRVLERFQASGLIVKEWNSVK DRVLERFQASGLIVKEWNSVKLHATVMNTL R F Q V K E 1 0 0 0 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 9 0 961.55967 Q8N9N2 Q8N9N2 289 297 ASCC1 Activating signal cointegrator 1 complex subunit 1 yes yes 2 0.0010014 141.52 By MS/MS 7 0 1 1 976480 976480 0 4456 1935 4613 10389 8523 8523 1 15329 0 FQDDNVEGDKVSK LLSRFGGSDRLRQFKFQDDNVEGDKVSKKD FKFQDDNVEGDKVSKKDEIELAMQQICANV K F Q S K K 0 0 1 3 0 1 1 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 13 1 1479.6842 Q92621 Q92621 1733 1745 NUP205 Nuclear pore complex protein Nup205 yes yes 3 0.019395 78.903 By MS/MS 2 0 1 1 411660 411660 0 4457 2065 4614 10390 8524 8524 1 139240 0 FQDGDLTLYQSNTILR EGSLKASCLYGQLPKFQDGDLTLYQSNTIL QDGDLTLYQSNTILRHLGRTLGLYGKDQQE K F Q L R H 0 1 1 2 0 2 0 1 0 1 3 0 0 1 0 1 2 0 1 0 0 0 16 0 1882.9425 P09211 P09211 56 71 GSTP1 Glutathione S-transferase P yes yes 2 1.4893E-31 259.27 By MS/MS 8.5 0.5 1 1 2 318060 318060 0 4458 534 4615 10391;10392 8525;8526 8526 1 4588.2 0 FQDGVLEPDFPR CQGKTYLFKGSQYWRFQDGVLEPDFPRNIS YWRFQDGVLEPDFPRNISDGFGGIPDDAHL R F Q P R N 0 1 0 2 0 1 1 1 0 0 1 0 0 2 2 0 0 0 0 1 0 0 12 0 1418.683 CON__Q3ZBS7 CON__Q3ZBS7 226 237 yes yes 2 0.0074761 96.334 By MS/MS 5 0 1 1 504510 504510 0 + 4459 66 4616 10393 8527 8527 1 5060 0 FQDLGAAYEVLSDSEK LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE QDLGAAYEVLSDSEKRKQYDTYGEEGLKDG K F Q E K R 2 0 0 2 0 1 2 1 0 0 2 1 0 1 0 2 0 0 1 1 0 0 16 0 1770.8312 Q9UBS4 Q9UBS4 67 82 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 1.9579E-08 225.29 By MS/MS 7 0 1 1 1100700 1100700 0 4460 2704 4617 10394 8528 8528 1 17279 0 FQDQVLDLLK PFSIALLLSVTRIQRFQDQVLDLLKTSVVK TRIQRFQDQVLDLLKTSVVKSFKDLQLLQG R F Q L K T 0 0 0 2 0 2 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1217.6656 Q9NVI1 Q9NVI1 322 331 FANCI Fanconi anemia group I protein yes yes 2 0.011197 91.636 By MS/MS 4 0.816 1 1 1 3 184450 184450 0 4461 2597 4618 10395;10396;10397 8529 8529 1 7607.6 0 FQEAKGDSPQEK PKRPRSAYNVYVAERFQEAKGDSPQEKLKT AERFQEAKGDSPQEKLKTVKENWKNLSDSE R F Q E K L 1 0 0 1 0 2 2 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 12 1 1362.6416 Q00059 Q00059 170 181 TFAM Transcription factor A, mitochondrial yes yes 2;3 9.5807E-05 177.04 By MS/MS 8.5 0.5 2 2 4 3278700 3278700 0 4462 1258 4619 10398;10399;10400;10401 8530;8531;8532 8532 3 57376 0 FQEDIISIWNK FMVGEEICGAVVSVRFQEDIISIWNKTASD VSVRFQEDIISIWNKTASDQATTARIRDTL R F Q N K T 0 0 1 1 0 1 1 0 0 3 0 1 0 1 0 1 0 1 0 0 0 0 11 0 1391.7085 O60573 O60573 175 185 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 2 1.1001E-07 202.03 By MS/MS 8 0 1 1 212560 212560 0 4463 265 4620 10402 8533 8533 1 2683.5 0 FQEEVLAK AFFLNEVEVQEGFLRFQEEVLAKCSMDHGV VQEGFLRFQEEVLAKCSMDHGVDSSIFQNP R F Q A K C 1 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 962.5073 Q8N9N2 Q8N9N2 181 188 ASCC1 Activating signal cointegrator 1 complex subunit 1 yes yes 2 0.019664 100.02 By MS/MS 7 0 1 1 2671500 2671500 0 4464 1935 4621 10403 8534 8534 1 41937 0 FQEITGK VAVNKMDQVNWQQERFQEITGKLGHFLKQA QVNWQQERFQEITGKLGHFLKQAGFKESDV R F Q G K L 0 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 7 0 821.42832 Q9Y450 Q9Y450 418 424 HBS1L HBS1-like protein yes yes 2 0.025527 108.09 By MS/MS 3.5 1.12 1 1 1 1 4 1703800 1703800 0 4465 2887 4622 10404;10405;10406;10407 8535 8535 1 350630 0 FQELLASPAYR SAAQRQQLLEEERTRFQELLASPAYRASPL ERTRFQELLASPAYRASPLVAIGQTLARQM R F Q Y R A 2 1 0 0 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 11 0 1293.6717 Q9NSI2 Q9NSI2 197 207 FAM207A Protein FAM207A yes yes 2 0.00067759 128.01 By MS/MS 8 0 1 1 600630 600630 0 4466 2571 4623 10408 8536 8536 1 7582.8 0 FQELLQDLEK AQELLGYQVDPRSARFQELLQDLEKKERKR PRSARFQELLQDLEKKERKRLKEEKQKRKK R F Q E K K 0 0 0 1 0 2 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1261.6554 Q8TAE8 Q8TAE8 175 184 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.00044334 144.77 By MS/MS 9.5 0.5 1 1 2 1640200 1640200 0 4467 1974 4624 10409;10410 8537;8538 8537 2 36954 0 FQELLQDLEKK AQELLGYQVDPRSARFQELLQDLEKKERKR RSARFQELLQDLEKKERKRLKEEKQKRKKE R F Q K K E 0 0 0 1 0 2 2 0 0 0 3 2 0 1 0 0 0 0 0 0 0 0 11 1 1389.7504 Q8TAE8 Q8TAE8 175 185 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 3 0.00058855 124.38 By MS/MS 9 0 1 1 1069200 1069200 0 4468 1974 4625 10411 8539 8539 1 21043 0 FQETEFLSPPR PLDVENIQKRIDQSKFQETEFLSPPRKVPR DQSKFQETEFLSPPRKVPRLSEKSVEERDS K F Q P R K 0 1 0 0 0 1 2 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 11 0 1349.6616 P42166 P42166 417 427 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 1.9964E-05 163.9 By MS/MS 5 0 1 1 1310500 1310500 0 4469 875 4626 10412 8540;8541 8541 2 13144 0 FQIATVTEK CMRVLYYRDARSYNRFQIATVTEKGVEIEG ARSYNRFQIATVTEKGVEIEGPLSTETNWD R F Q E K G 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 9 0 1035.5601 P28070 P28070 232 240 PSMB4 Proteasome subunit beta type-4 yes yes 2 0.0046557 109.83 By MS/MS By matching 8.33 0.471 2 1 2 1 6366400 6329300 37049 4470 749 4627 10413;10414;10415 8542;8543 8542 2 89675 49995 FQIEANFPR VIHDFLFSLKESPEKFQIEANFPRRVLPCI KESPEKFQIEANFPRRVLPCIPSEEWPNPP K F Q P R R 1 1 1 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 9 0 1120.5665 Q96CS3 Q96CS3 401 409 FAF2 FAS-associated factor 2 yes yes 2 0.00044086 148.52 By MS/MS 7 0.816 1 1 1 3 9975000 9975000 0 4471 2126 4628 10416;10417;10418 8544;8545 8544 2 74143 0 FQILDFTSPK RQIYEVEKAVHLLKKFQILDFTSPKQSVYL HLLKKFQILDFTSPKQSVYLDLTLDMALGK K F Q P K Q 0 0 0 1 0 1 0 0 0 1 1 1 0 2 1 1 1 0 0 0 0 0 10 0 1194.6285 Q9BYD6 Q9BYD6 109 118 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 3.1545E-05 160.36 By MS/MS 7.5 0.5 1 1 2 1084200 1084200 0 4472 2371 4629 10419;10420 8546;8547 8547 2 14340 0 FQKDTEMVER IAALVSTIASDIVSRFQKDTEMVERLNTSL DIVSRFQKDTEMVERLNTSLAFFLNDLLSV R F Q E R L 0 1 0 1 0 1 2 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 10 1 1281.6023 Q96N67 Q96N67 1060 1069 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.0027345 107.11 By MS/MS 2.33 0.471 2 1 3 944210 944210 0 4473 2201 4630;4631 10421;10422;10423 8548;8549 8549 1030 2 287530 0 FQLFGSPSGQK LRQAQEKFGKDKSPKFQLFGSPSGQKDLLF KSPKFQLFGSPSGQKDLLFKDSAIGFSRVP K F Q Q K D 0 0 0 0 0 2 0 2 0 0 1 1 0 2 1 2 0 0 0 0 0 0 11 0 1194.6033 P02788 P02788 305 315 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.010982 109.44 By MS/MS 1 0 1 1 181850 0 181850 4474 459 4632 10424 8550;8551 8550 2 0 181850 FQLTSDEMSLLR KLEIRAQVADAFLSKFQLTSDEMSLLRGTR LSKFQLTSDEMSLLRGTREGPITEDFFKAL K F Q L R G 0 1 0 1 0 1 1 0 0 0 3 0 1 1 0 2 1 0 0 0 0 0 12 0 1438.7126 Q9Y2V7 Q9Y2V7 160 171 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.0075183 95.477 By MS/MS 5 0 1 1 636250 636250 0 4475 2845 4633 10425 8552 8552 1186 1 6381.3 0 FQMTQEVVCDECPNVK NCRQEMRTTQLGPGRFQMTQEVVCDECPNV QMTQEVVCDECPNVKLVNEERTLEVEIEPG R F Q V K L 0 0 1 1 2 2 2 0 0 0 0 1 1 1 1 0 1 0 0 3 0 0 16 0 1982.8536 Q9UBS4 Q9UBS4 185 200 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 2.1363E-25 292.76 By MS/MS 7 0 1 1 1665300 1665300 0 4476 2704 4634 10426 8553 8553 1 26142 0 FQNSLKELQLQK RVSQERTVKDQDITRFQNSLKELQLQKQKV ITRFQNSLKELQLQKQKVEEELNRLKRTAS R F Q Q K Q 0 0 1 0 0 3 1 0 0 0 3 2 0 1 0 1 0 0 0 0 0 0 12 1 1474.8144 P15924 P15924 1559 1570 DSP Desmoplakin yes yes 3 0.0099227 95.094 By MS/MS 3 0 1 1 223200 0 223200 4477 628 4635 10427 8554 8554 1 0 28409 FQPASAPAEDCISSSTEPKPDPK TKATSKPMGGSAPAKFQPASAPAEDCISSS EDCISSSTEPKPDPKKAKAPGLSSKAKSAQ K F Q P K K 3 0 0 2 1 1 2 0 0 1 0 2 0 1 5 4 1 0 0 0 0 0 23 1 2458.1322 Q14008 Q14008 1103 1125 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.016874 63.869 By MS/MS 2 0 1 1 2381800 2381800 0 4478 1417 4636 10428 8555 8555 1 805630 0 FQPFQDGSSGQR DGNVSFLPENSFPSRFQPFQDGSSGQRRLI PSRFQPFQDGSSGQRRLIALLMAFVCSLPR R F Q Q R R 0 1 0 1 0 3 0 2 0 0 0 0 0 2 1 2 0 0 0 0 0 0 12 0 1352.6109 Q96T76 Q96T76 701 712 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.027006 81.525 By MS/MS 4 0 1 1 1294900 1294900 0 4479 2240 4637 10429 8556 8556 1 121860 0 FQPQSPDFLDITNPK VQVESVNLQVATYSKFQPQSPDFLDITNPK FQPQSPDFLDITNPKAVLENALRNFACLTT K F Q P K A 0 0 1 2 0 2 0 0 0 1 1 1 0 2 3 1 1 0 0 0 0 0 15 0 1745.8625 Q92890 Q92890 125 139 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.00049137 177.38 By MS/MS 7.5 0.5 1 1 2 1356500 1356500 0 4480 2075 4638 10430;10431 8557;8558 8557 2 20671 0 FQQVPTDALANK PPVDPNQEVPPGPPRFQQVPTDALANKLFG PPRFQQVPTDALANKLFGAPEPSTIARSLP R F Q N K L 2 0 1 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 12 0 1330.6881 Q6PKG0 Q6PKG0 742 753 LARP1 La-related protein 1 yes yes 2 1.4573E-07 202.96 By MS/MS 3.5 0.5 1 1 2 5000300 5000300 0 4481 1722 4639 10432;10433 8559 8559 1 162250 0 FQSIVIGCALEDQK SACSSEVPHGPVDQKFQSIVIGCALEDQKK KFQSIVIGCALEDQKKIKRRLETLLRNIEN K F Q Q K K 1 0 0 1 1 2 1 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 14 0 1606.8025 O95816 O95816 155 168 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 6.6058E-05 212.1 By MS/MS 8 0 1 1 868060 868060 0 4482 428 4640 10434 8560 8560 1 10959 0 FQSIVIGCALEDQKK SACSSEVPHGPVDQKFQSIVIGCALEDQKK FQSIVIGCALEDQKKIKRRLETLLRNIENS K F Q K K I 1 0 0 1 1 2 1 1 0 2 1 2 0 1 0 1 0 0 0 1 0 0 15 1 1734.8975 O95816 O95816 155 169 BAG2 BAG family molecular chaperone regulator 2 yes yes 2;3 0.0042913 118.52 By MS/MS 8 0 2 2 2305900 2305900 0 4483 428 4641 10435;10436 8561;8562 8562 2 29112 0 FQSLGVAFYR RLVTMQIWDTAGQERFQSLGVAFYRGADCC AGQERFQSLGVAFYRGADCCVLVFDVTAPN R F Q Y R G 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 1 0 0 1 1 0 0 10 0 1186.6135 P51149 P51149 70 79 RAB7A Ras-related protein Rab-7a yes yes 2 0.00034923 136.99 By MS/MS 9 0 1 1 982280 982280 0 4484 990 4642 10437 8563 8563 1 19331 0 FQTEIQTVNK IADTMVQIFKGLQERFQTEIQTVNKQFPCE GLQERFQTEIQTVNKQFPCEPFKFLEPTLR R F Q N K Q 0 0 1 0 0 2 1 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 10 0 1206.6245 P14868 P14868 321 330 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 4.4E-11 221.68 By MS/MS By MS/MS 3.5 2.5 1 1 1 1 607850 548130 59718 4485 620 4643 10438;10439 8564;8565 8565 2 132080 61194 FQVDLVSENAGR DGLGRPLGPTPSQSRFQVDLVSENAGRAAA QSRFQVDLVSENAGRAAAAAAAAAAAAAAA R F Q G R A 1 1 1 1 0 1 1 1 0 0 1 0 0 1 0 1 0 0 0 2 0 0 12 0 1333.6626 P55011 P55011 81 92 SLC12A2 Solute carrier family 12 member 2 yes yes 2 4.0566E-05 170.4 By MS/MS 2 0.816 1 1 1 3 363400 363400 0 4486 1051 4644 10440;10441;10442 8566 8566 1 78125 0 FQVYQLR IDVQESFCMEEKQNKFQVYQLRFQFLPHAY CMEEKQNKFQVYQLRFQFLPHAYYQQEKCL K F Q L R F 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 952.51305 O95602 O95602 1312 1318 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.03266 107.66 By MS/MS 1.5 0.5 1 1 2 338490 338490 0 4487 418 4645 10443;10444 8567 8567 1 106870 0 FRDLSIEEYIR RLELGDVQALSLWQKFRDLSIEEYIRVYKR LWQKFRDLSIEEYIRVYKRLGVYFDEYSGE K F R I R V 0 2 0 1 0 0 2 0 0 2 1 0 0 1 0 1 0 0 1 0 0 0 11 1 1439.7409 Q5T160 Q5T160 244 254 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 3 0.0047077 126.71 By MS/MS 6 0 1 1 1366600 1366600 0 4488 1627 4646 10445 8568 8568 1 9394.5 0 FRDSILR TQWRGMGLSLMRLDRFRDSILRSDEAVKPF LSLMRLDRFRDSILRSDEAVKPFGLKVSQL R F R L R S 0 2 0 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 7 1 905.5083 P49327 P49327 516 522 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.033515 89.296 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 2753300 2753300 0 4489 946 4647 10446;10447;10448;10449;10450;10451 8569;8570 8569 2 425360 0 FREALGDAQQSVR SYYGNRAATLMMLGRFREALGDAQQSVRLD GRFREALGDAQQSVRLDDSFVRGHLREGKC R F R V R L 2 2 0 1 0 2 1 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 13 1 1475.7481 Q99615 Q99615 78 90 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 0.00060648 174.21 By MS/MS 6.33 0.471 2 1 3 12576000 12576000 0 4490 2253 4648 10452;10453;10454 8571;8572 8572 2 89191 0 FREDHPDLIQNAK DFQREKQEFERNLARFREDHPDLIQNAKKS ARFREDHPDLIQNAKKSDIPEKPKTPQQLW R F R A K K 1 1 1 2 0 1 1 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 13 1 1581.79 P17480 P17480 179 191 UBTF Nucleolar transcription factor 1 yes yes 3 0.017219 130.15 By MS/MS 4.5 0.5 1 1 2 1928600 1928600 0 4491 641 4649 10455;10456 8573 8573 1 132790 0 FRENVEKR VLDGDRMAESLYEIRFRENVEKRILCHMQL ESLYEIRFRENVEKRILCHMQLSSAQVEQL R F R K R I 0 2 1 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 8 2 1076.5727 O15321 O15321 97 104 TM9SF1 Transmembrane 9 superfamily member 1 yes yes 3 0.022598 85.731 By MS/MS 1 0 1 1 97190 97190 0 4492 182 4650 10457 8574 8574 1 23420 0 FRHGVIVAADSR PGIEMLHGTTTLAFKFRHGVIVAADSRATA AFKFRHGVIVAADSRATAGAYIASQTVKKV K F R S R A 2 2 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 2 0 0 12 1 1326.7157 P28074 P28074 67 78 PSMB5 Proteasome subunit beta type-5 yes yes 3 0.014958 83.314 By MS/MS 9 0 1 1 1220600 1220600 0 4493 751 4651 10458 8575 8575 1 24022 0 FRLILIESR VRKHLERNRKDKDAKFRLILIESRIHRLAR KDKDAKFRLILIESRIHRLARYYKTKRVLP K F R S R I 0 2 0 0 0 0 1 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 9 1 1145.6921 P62277 P62277 113 121 RPS13 40S ribosomal protein S13 yes yes 2 0.0090868 123.35 By MS/MS 9.5 0.5 1 1 2 500820 500820 0 4494 1151 4652 10459;10460 8576 8576 1 12951 0 FRPAGAAPR NRSREARKDRTPPPRFRPAGAAPRPPPKPM RTPPPRFRPAGAAPRPPPKPM_________ R F R P R P 3 2 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 9 1 941.51953 P62854;Q5JNZ5 P62854 101 109 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 0.04869 82.75 By MS/MS 10 0 1 1 354790 354790 0 4495 1177 4653 10461 8577 8577 1 19122 0 FRPEETK GGGHKQRYRMIDFLRFRPEETKSGPFEEKV YRMIDFLRFRPEETKSGPFEEKVIQVRYDP R F R T K S 0 1 0 0 0 0 2 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 7 1 905.46068 Q5T653 Q5T653 112 118 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 3 0.026156 101.6 By MS/MS 8 0 1 1 710820 710820 0 4496 1634 4654 10462 8578 8578 1 8974 0 FRPLNESEVNR ______________________________ VMCRFRPLNESEVNRGDKYIAKFQGEDTVV R F R N R G 0 2 2 0 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 11 1 1359.6895 P33176 P33176 15 25 KIF5B Kinesin-1 heavy chain yes yes 2 0.019653 106.62 By MS/MS 3.5 0.5 1 1 2 678100 678100 0 4497 800 4655 10463;10464 8579 8579 1 57888 0 FRPLNESEVNRGDK ______________________________ RFRPLNESEVNRGDKYIAKFQGEDTVVIAS R F R D K Y 0 2 2 1 0 0 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 14 2 1659.8329 P33176 P33176 15 28 KIF5B Kinesin-1 heavy chain yes yes 3 0.00036527 161.87 By MS/MS 4 0 1 1 1855600 1855600 0 4498 800 4656 10465 8580 8580 1 174630 0 FRQHLLGTSPER RFVSLRDGFVCALLRFRQHLLGTSPERVVQ LLRFRQHLLGTSPERVVQHLCQRRVEPPEL R F R E R V 0 2 0 0 0 1 1 1 1 0 2 0 0 1 1 1 1 0 0 0 0 0 12 1 1439.7633 Q8WUY1 Q8WUY1 151 162 THEM6 Protein THEM6 yes yes 3 0.005309 92.247 By MS/MS 9 0 1 1 834150 834150 0 4499 2019 4657 10466 8581 8581 1 16416 0 FSAEVLSSLR LLDHLFFHYEFQNQRFSAEVLSSLRQLNLA FQNQRFSAEVLSSLRQLNLAGVRMTPVKCT R F S L R Q 1 1 0 0 0 0 1 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 10 0 1107.5924 Q86UT6 Q86UT6 690 699 NLRX1 NLR family member X1 yes yes 2 0.00075943 128.27 By MS/MS 4 0 1 1 1500200 1500200 0 4500 1825 4658 10467 8582 8582 1 141180 0 FSALQQAVPTESTDNR AASEAARPATSTLNRFSALQQAVPTESTDN SALQQAVPTESTDNRRVVQRSSLSRERGEK R F S N R R 2 1 1 1 0 2 1 0 0 0 1 0 0 1 1 2 2 0 0 1 0 0 16 0 1762.8486 Q04637 Q04637 1123 1138 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 3.6023E-05 225.72 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 13657000 13657000 0 4501 1291 4659 10468;10469;10470;10471;10472;10473 8583;8584;8585 8583 3 3897700 0 FSALQQAVPTESTDNRR AASEAARPATSTLNRFSALQQAVPTESTDN ALQQAVPTESTDNRRVVQRSSLSRERGEKA R F S R R V 2 2 1 1 0 2 1 0 0 0 1 0 0 1 1 2 2 0 0 1 0 0 17 1 1918.9497 Q04637 Q04637 1123 1139 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00022731 218.94 By MS/MS 3 1.66 1 4 1 1 1 8 84244000 84244000 0 4502 1291 4660 10474;10475;10476;10477;10478;10479;10480;10481 8586;8587;8588;8589;8590;8591;8592;8593 8589 7 23883000 0 FSASGELGNGNIK IGDAVVISCAKDGVKFSASGELGNGNIKLS VKFSASGELGNGNIKLSQTSNVDKEEEAVT K F S I K L 1 0 2 0 0 0 1 3 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1292.6361 P12004 P12004 169 181 PCNA Proliferating cell nuclear antigen yes yes 2 0.0059372 100.82 By MS/MS 8 0 1 1 1271400 1271400 0 4503 587 4661 10482 8594 8594 1 16051 0 FSASSGGGGSR ______________________________ GASRFSASSGGGGSRGAPQHYPKTAGNSEF R F S S R G 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 4 0 0 0 0 0 0 11 0 968.43117 P78344 P78344 13 23 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 2.4851E-05 159.34 By MS/MS By matching 6.4 2.58 2 1 1 1 4 1 9361600 9334800 26772 4504 1219 4662 10483;10484;10485;10486;10487 8595;8596;8597 8595 3 759980 57041 FSCLLPDPR VDSGADKKFARKPPRFSCLLPDPRELIEIK ARKPPRFSCLLPDPRELIEIKNKKKLLITG R F S P R E 0 1 0 1 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1103.5434 Q92538 Q92538 683 691 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.007968 104.01 By MS/MS 2.5 0.5 1 1 2 565130 565130 0 4505 2050 4663 10488;10489 8598 8598 1 144710 0 FSDDKDGVLPVK LLEKYKQENTRTNVRFSDDKDGVLPVKTFL NVRFSDDKDGVLPVKTFLEYLEYEKDVLNI R F S V K T 0 0 0 3 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 12 1 1318.6769 Q9H2M9 Q9H2M9 700 711 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 3 0.0034929 102.05 By MS/MS 3 0 1 1 337760 337760 0 4506 2431 4664 10490 8599 8599 1 6180.1 0 FSDFLGLYEK SLPLFRSKQFAVKRRFSDFLGLYEKLSEKH AVKRRFSDFLGLYEKLSEKHSQNGFIVPPP R F S E K L 0 0 0 1 0 0 1 1 0 0 2 1 0 2 0 1 0 0 1 0 0 0 10 0 1217.5968 Q13596 Q13596 187 196 SNX1 Sorting nexin-1 yes yes 2 0.00017955 148.52 By MS/MS 5 0 1 1 205870 205870 0 4507 1401 4665 10491 8600 8600 1 2064.8 0 FSDIQIR ALFNRLVPSVNGVRRFSDIQIRRLKRLGIE PSVNGVRRFSDIQIRRLKRLGIEKTDPTTL R F S I R R 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 7 0 877.46577 P11586 P11586 489 495 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.013192 127.12 By MS/MS By matching 4 0 2 1 1 5189700 5169800 19887 4508 582 4666 10492;10493 8601 8601 1 486510 42372 FSDQFPLPLKER LHGFKNQVGDENWRRFSDQFPLPLKERLAA WRRFSDQFPLPLKERLAAFYGV________ R F S E R L 0 1 0 1 0 1 1 0 0 0 2 1 0 2 2 1 0 0 0 0 0 0 12 1 1475.7773 Q92973 Q92973 880 891 TNPO1 Transportin-1 yes yes 3 0.019042 79.886 By MS/MS 4 0 1 1 1291500 1291500 0 4509 2082 4667 10494 8602 8602 1 121540 0 FSEGTSADR CIIFMDEIDAIGGRRFSEGTSADREIQRTL AIGGRRFSEGTSADREIQRTLMELLNQMDG R F S D R E 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 9 0 968.41994 P62333 P62333 243 251 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0010987 132.76 By MS/MS 7 0 1 1 817310 817310 0 4510 1159 4668 10495 8603 8603 1 12830 0 FSEGVLQSPSQDQEK KGDAHLRPTSLVQRRFSEGVLQSPSQDQEK FSEGVLQSPSQDQEKLGGSLAALPQGQGSQ R F S E K L 0 0 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 15 0 1677.7846 Q9C0C2 Q9C0C2 428 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 7.4319E-11 267.23 By MS/MS 2 0 1 1 440590 440590 0 4511 2390 4669 10496 8604 8604 1 149030 0 FSELTAEK IELIAIATGGRIVPRFSELTAEKLGFAGLV GGRIVPRFSELTAEKLGFAGLVQEISFGTT R F S E K L 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 923.46001 P48643 P48643 345 352 CCT5 T-complex protein 1 subunit epsilon yes yes 2 7.6273E-05 153.71 By MS/MS By MS/MS 6 0.707 1 2 1 3 1 59272000 58884000 388040 4512 940 4670 10497;10498;10499;10500 8605;8606;8607;8608 8608 4 404780 397630 FSELVMK VLLQDSLLATASSPKFSELVMKCLWRMVRL LATASSPKFSELVMKCLWRMVRLLPDTINS K F S M K C 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 1 0 0 7 0 852.44153 Q14008 Q14008 1705 1711 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.012522 128.86 By MS/MS 2 0 1 1 536730 536730 0 4513 1417 4671 10501 8609 8609 1 181540 0 FSEYLLECPSAEVR RFWFAHNVLFNVSNRFSEYLLECPSAEVRG RFSEYLLECPSAEVRGAFAKLIVFIAHFSL R F S V R G 1 1 0 0 1 0 3 0 0 0 2 0 0 1 1 2 0 0 1 1 0 0 14 0 1698.7923 Q93008;O00507 Q93008 2100 2113 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 6.1445E-11 251.81 By MS/MS 3 1.41 1 1 1 1 1 5 3141800 3141800 0 4514 2085 4672 10502;10503;10504;10505;10506 8610;8611;8612;8613;8614 8612 5 629980 0 FSGGFGAR HHYKGSSRGRSKSSRFSGGFGARDYRQSSG GRSKSSRFSGGFGARDYRQSSGASSSSFSS R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 O00571;O15523 O00571 593 600 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.042451 96.19 By MS/MS 5 0 1 1 0 0 0 4515 116 4673 10507 8615 8615 1 0 0 FSGGYPALMDCMNK NTWYGEQDQAVHLWRFSGGYPALMDCMNKL RFSGGYPALMDCMNKLKNNKEYLEFRRERS R F S N K L 1 0 1 1 1 0 0 2 0 0 1 1 2 1 1 1 0 0 1 0 0 0 14 0 1589.6677 Q9BPW8 Q9BPW8 128 141 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.00070933 130.44 By MS/MS 8 0 1 1 411870 411870 0 4516 2278 4674 10508 8616 8616 1 5199.8 0 FSGKHVVFIAQR FQKIQVRLVRELEKKFSGKHVVFIAQRRIL EKKFSGKHVVFIAQRRILPKPTRKSRTKNK K F S Q R R 1 1 0 0 0 1 0 1 1 1 0 1 0 2 0 1 0 0 0 2 0 0 12 1 1387.7725 P62081 P62081 87 98 RPS7 40S ribosomal protein S7 yes yes 3 0.002414 107.03 By MS/MS 9 0 1 1 220920 220920 0 4517 1138 4675 10509 8617 8617 1 4347.8 0 FSGSGSGTDFTLK LIYEVSSRFSGVPDRFSGSGSGTDFTLKIS DRFSGSGSGTDFTLKISRVEAEDVGVYYCM R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A075B6S6;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A2NJV5 87 99 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2D-30;IGKV2D-28;IGKV2-40 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 3.8513E-24 275.11 By MS/MS By MS/MS 7.92 2.17 2 1 2 2 2 2 2 12 33 6 51 13 946600000 935070000 11537000 4518 1 4676 10510;10511;10512;10513;10514;10515;10516;10517;10518;10519;10520;10521;10522;10523;10524;10525;10526;10527;10528;10529;10530;10531;10532;10533;10534;10535;10536;10537;10538;10539;10540;10541;10542;10543;10544;10545;10546;10547;10548;10549;10550;10551;10552;10553;10554;10555;10556;10557;10558;10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573 8618;8619;8620;8621;8622;8623;8624;8625;8626;8627;8628;8629;8630;8631;8632;8633;8634;8635;8636;8637;8638;8639;8640;8641;8642;8643;8644;8645;8646;8647;8648;8649;8650;8651;8652;8653;8654;8655;8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667;8668;8669;8670;8671;8672;8673;8674;8675;8676;8677;8678;8679;8680;8681;8682;8683;8684;8685;8686;8687;8688;8689;8690;8691;8692;8693;8694;8695;8696;8697;8698;8699;8700;8701;8702;8703;8704;8705 8646 86 17267000 22027000 FSGVPDR PGQSPQLLIYEVSSRFSGVPDRFSGSGSGT LIYEVSSRFSGVPDRFSGSGSGTDFTLKIS R F S D R F 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 7 0 776.3817 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A0C4DH68;A0A075B6R9 A2NJV5 80 86 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2-24;IGKV2D-24 no no 2 0.017677 115.46 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 453950000 453850000 102180 4519 1;0 4677 10574;10575;10576;10577;10578 8706;8707;8708;8709;8710;8711;8712 8710 7 8463400 184010 FSGVPDRFSGSGSGTDFTLK PGQSPQLLIYEVSSRFSGVPDRFSGSGSGT DRFSGSGSGTDFTLKISRVEAEDVGVYYCM R F S L K I 0 1 0 2 0 0 0 4 0 0 1 1 0 3 1 4 2 0 0 1 0 0 20 1 2060.9803 A2NJV5;A0A0A0MRZ7;A0A075B6S2 A2NJV5 80 99 IGKV A18;IGKV2D-26;IGKV2D-29 yes no 2;3 2.0095E-09 211.49 By MS/MS By MS/MS 7.69 1.69 1 1 2 2 4 4 2 15 1 382130000 382000000 131790 4520 1 4678 10579;10580;10581;10582;10583;10584;10585;10586;10587;10588;10589;10590;10591;10592;10593;10594 8713;8714;8715;8716;8717;8718;8719;8720;8721;8722;8723;8724 8719 11 5761300 300520 FSGYGQLCER QCVTVERELEKVLHKFSGYGQLCERGLEEL KVLHKFSGYGQLCERGLEELIDYTGGLKHE K F S E R G 0 1 0 0 1 1 1 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 10 0 1215.5343 Q9H871 Q9H871 18 27 RMND5A Protein RMD5 homolog A yes yes 2 0.00019118 147.73 By MS/MS 7 0 1 1 1024600 1024600 0 4521 2473 4679 10595 8725 8725 1 16085 0 FSHQASGFQCDLTTNNR VGVQKILNARCPLVRFSHQASGFQCDLTTN HQASGFQCDLTTNNRIALTSSELLYIYGAL R F S N R I 1 1 2 1 1 2 0 1 1 0 1 0 0 2 0 2 2 0 0 0 0 0 17 0 1981.8701 Q9NVV4 Q9NVV4 315 331 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 0.00047591 157.07 By MS/MS 6 0 1 1 2449400 2449400 0 4522 2605 4680 10596 8726 8726 1 16838 0 FSHQGVQLIDFSPCER GIALWGGEKFKQIQRFSHQGVQLIDFSPCE SHQGVQLIDFSPCERYLVTFSPLMDTQDDP R F S E R Y 0 1 0 1 1 2 1 1 1 1 1 0 0 2 1 2 0 0 0 1 0 0 16 0 1918.8996 P55884 P55884 371 386 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 6.5727E-07 225.33 By MS/MS 5.29 1.03 2 2 2 1 7 33644000 33644000 0 4523 1065 4681 10597;10598;10599;10600;10601;10602;10603 8727;8728;8729;8730;8731 8728 5 1413800 0 FSIQTMCPIEGEGNIAR GFTLIWKNVPKTQMKFSIQTMCPIEGEGNI IQTMCPIEGEGNIARFLFSLFGQKHNAVNA K F S A R F 1 1 1 0 1 1 2 2 0 3 0 0 1 1 1 1 1 0 0 0 0 0 17 0 1921.9026 Q13155 Q13155 199 215 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 5.0429E-57 346.65 By MS/MS 7.5 0.5 2 2 4 4037600 4037600 0 4524 1360 4682;4683 10604;10605;10606;10607 8732;8733 8732 788 2 60032 0 FSIYPPIPGEESSLR AKQKVEQNAAPSHTKFSIYPPIPGEESSLR FSIYPPIPGEESSLRWAGKKFEEIPIAHIK K F S L R W 0 1 0 0 0 0 2 1 0 2 1 0 0 1 3 3 0 0 1 0 0 0 15 0 1690.8566 P82912 P82912 60 74 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2 0.00073861 115 By MS/MS 9.5 0.5 1 1 2 1025900 1025900 0 4525 1234 4684 10608;10609 8734;8735;8736 8736 3 37714 0 FSKEQLPIFK VLASCPKKPVSSYLRFSKEQLPIFKAQNPD SSYLRFSKEQLPIFKAQNPDAKTTELIRRI R F S F K A 0 0 0 0 0 1 1 0 0 1 1 2 0 2 1 1 0 0 0 0 0 0 10 1 1235.6914 Q00059 Q00059 60 69 TFAM Transcription factor A, mitochondrial yes yes 2;3 0.0012615 143.37 By MS/MS 8.5 0.5 2 2 4 2887800 2887800 0 4526 1258 4685 10610;10611;10612;10613 8737;8738 8738 2 48082 0 FSLFSAAVR LRTAYLRAEDSEREKFSLFSAAVRESHEKE DSEREKFSLFSAAVRESHEKERTRAERTKN K F S V R E 2 1 0 0 0 0 0 0 0 0 1 0 0 2 0 2 0 0 0 1 0 0 9 0 996.53927 Q96ER9 Q96ER9 179 187 CCDC51 Coiled-coil domain-containing protein 51 yes yes 2 0.0015156 127.46 By MS/MS 7 0 1 1 503260 503260 0 4527 2149 4686 10614 8739 8739 1 7900.3 0 FSLIDLAGNER VFQIILRRKGKLHGKFSLIDLAGNERGADT LHGKFSLIDLAGNERGADTSSADRQTRLEG K F S E R G 1 1 1 1 0 0 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1233.6354 O00139 O00139 453 463 KIF2A Kinesin-like protein KIF2A yes yes 2 3.242E-07 199.33 By MS/MS 5 0.816 1 1 1 3 2049600 2049600 0 4528 82 4687 10615;10616;10617 8740;8741 8741 2 126010 0 FSLVDLAGNER VFQIILKSGRIMHGKFSLVDLAGNERGADT MHGKFSLVDLAGNERGADTTKASRKRQLEG K F S E R G 1 1 1 1 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1219.6197 Q8N4N8;Q99661 Q8N4N8 443 453 KIF2B;KIF2C Kinesin-like protein KIF2B;Kinesin-like protein KIF2C yes no 2 2.5118E-05 159.09 By MS/MS 4.5 0.5 1 1 2 906860 906860 0 4529 1916 4688 10618;10619 8742;8743 8743 2 48481 0 FSLVNTVCDR VGIFGKTALRLNSEKFSLVNTVCDRQVFPL LNSEKFSLVNTVCDRQVFPLFRHQDPGDPG K F S D R Q 0 1 1 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 10 0 1209.5812 Q8ND04 Q8ND04 65 74 SMG8 Protein SMG8 yes yes 2 0.00011219 153.1 By MS/MS 3 0 1 1 174070 174070 0 4530 1954 4689 10620 8744 8744 1 3185.1 0 FSMEILK GPPLVLRRILRRAVRFSMEILKAPPGFLGS RILRRAVRFSMEILKAPPGFLGSLVPVVVE R F S L K A 0 0 0 0 0 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 7 0 866.45718 Q5JTZ9 Q5JTZ9 360 366 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.043896 94.262 By MS/MS 4 0 1 1 226330 226330 0 4531 1613 4690 10621 8745 8745 1 21299 0 FSMVVQDGIVK DDSLVSIFGNRRLKRFSMVVQDGIVKALNV RLKRFSMVVQDGIVKALNVEPDGTGLTCSL R F S V K A 0 0 0 1 0 1 0 1 0 1 0 1 1 1 0 1 0 0 0 3 0 0 11 0 1221.6427 P30044 P30044 181 191 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.00038179 133.91 By MS/MS 10 0 2 2 624180 624180 0 4532 763 4691;4692 10622;10623 8746;8747 8747 380 2 33641 0 FSNISAAK GKGAYQDRDKPAQIRFSNISAAKAVADAIR DKPAQIRFSNISAAKAVADAIRTSLGPKGM R F S A K A 2 0 1 0 0 0 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 8 0 836.43922 P50991 P50991 35 42 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0050722 125.16 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 47296000 47296000 0 4533 985 4693 10624;10625;10626;10627;10628;10629;10630;10631 8748;8749;8750;8751 8750 4 423460 0 FSNSSSSNEFSK QSCSNGQHEYGSCGRFSNSSSSNEFSKCDQ CGRFSNSSSSNEFSKCDQYGSGSSQSTSFE R F S S K C 0 0 2 0 0 0 1 0 0 0 0 1 0 2 0 6 0 0 0 0 0 0 12 0 1319.563 CON__Q5D862;Q5D862 CON__Q5D862 404 415 FLG2 Filaggrin-2 yes no 2 8.6093E-20 236.22 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 20179000 7285900 12893000 + 4534 67 4694 10632;10633;10634;10635;10636;10637;10638;10639;10640;10641;10642;10643;10644;10645;10646;10647;10648;10649;10650 8752;8753;8754;8755;8756;8757;8758;8759;8760;8761;8762;8763;8764;8765;8766;8767;8768;8769;8770 8754 19 692440 9540900 FSPAGPILSIR GDLHPDVTEAMLYEKFSPAGPILSIRVCRD LYEKFSPAGPILSIRVCRDMITRRSLGYAY K F S I R V 1 1 0 0 0 0 0 1 0 2 1 0 0 1 2 2 0 0 0 0 0 0 11 0 1156.6604 P11940;Q9H361;Q4VXU2 P11940 31 41 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 2 0.0059597 101.38 By MS/MS 5 0 1 1 9153300 9153300 0 4535 586 4695 10651 8771 8771 1 91803 0 FSPGAPGGSGSQPNQK KFSPVTPKFTPVASKFSPGAPGGSGSQPNQ SPGAPGGSGSQPNQKLGHPEALSAGTGSPQ K F S Q K L 1 0 1 0 0 2 0 4 0 0 0 1 0 1 3 3 0 0 0 0 0 0 16 0 1514.7114 Q15942 Q15942 280 295 ZYX Zyxin yes yes 2 0.00031753 139.19 By MS/MS 5 0 1 1 3565300 3565300 0 4536 1541 4696 10652 8772 8772 1 35758 0 FSPNSSNPIIVSCGWDK TVQDESHSEWVSCVRFSPNSSNPIIVSCGW PNSSNPIIVSCGWDKLVKVWNLANCKLKTN R F S D K L 0 0 2 1 1 0 0 1 0 2 0 1 0 1 2 4 0 1 0 1 0 0 17 0 1906.8883 P63244 P63244 156 172 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 1.6577E-11 244.23 By MS/MS 8 0 1 1 6766800 6766800 0 4537 1202 4697 10653 8773 8773 1 85430 0 FSPSQVPIQTR LTPPRSVDSLPRLRRFSPSQVPIQTRSFVC RLRRFSPSQVPIQTRSFVCFGDDGEPQLKE R F S T R S 0 1 0 0 0 2 0 0 0 1 0 0 0 1 2 2 1 0 0 1 0 0 11 0 1258.667 Q08AD1 Q08AD1 1018 1028 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.042467 73.9 By MS/MS 2 0 1 1 263840 263840 0 4538 1314 4698 10654 8774 8774 1 89242 0 FSPVATASYR LLMHCVKGIGKDHAKFSPVATASYRLLPDI KDHAKFSPVATASYRLLPDITLLEPVEGEA K F S Y R L 2 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 10 0 1097.5506 O15160 O15160 225 234 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0055163 104.42 By MS/MS 7 0 1 1 2286600 2286600 0 4539 166 4699 10655 8775 8775 1 35896 0 FSQFLETEYK FLRELAKVKQENKLKFSQFLETEYKVKINP ENKLKFSQFLETEYKVKINPSSMFDVQVKR K F S Y K V 0 0 0 0 0 1 2 0 0 0 1 1 0 2 0 1 1 0 1 0 0 0 10 0 1290.6132 P06737 P06737 546 555 PYGL Glycogen phosphorylase, liver form yes yes 2 0.00055002 132.32 By MS/MS 4 0 1 1 473350 473350 0 4540 501 4700 10656 8776 8776 1 44545 0 FSQLAEAYEVLSDEVK YHPDTNKDDPKAKEKFSQLAEAYEVLSDEV SQLAEAYEVLSDEVKRKQYDAYGSAGFDPG K F S V K R 2 0 0 1 0 1 3 0 0 0 2 1 0 1 0 2 0 0 1 2 0 0 16 0 1826.8938 Q96EY1 Q96EY1 135 150 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.001289 113.53 By MS/MS 7 0 1 1 104230 104230 0 4541 2150 4701 10657 8777 8777 1 1636.3 0 FSREEFPTLQAAGDQDK GAHGDGGRASSLLSRFSREEFPTLQAAGDQ REEFPTLQAAGDQDKAAKERESAEQSSGPG R F S D K A 2 1 0 2 0 2 2 1 0 0 1 1 0 2 1 1 1 0 0 0 0 0 17 1 1937.9119 P48634 P48634 165 181 PRRC2A Protein PRRC2A yes yes 3 0.0002692 149.31 By MS/MS 1.5 0.5 1 1 2 982950 982950 0 4542 938 4702 10658;10659 8778 8778 1 322160 0 FSRPESEQAR SQDEAEDDVKQITVRFSRPESEQARQRRVQ QITVRFSRPESEQARQRRVQSYEFLQKKHA R F S A R Q 1 2 0 0 0 1 2 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 10 1 1205.5789 Q9NVU0 Q9NVU0 177 186 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.027258 104.42 By MS/MS 5 0 1 1 824180 824180 0 4543 2603 4703 10660 8779 8779 1 8266.1 0 FSSCGGGGGSFGAGGGFGSR TTSSSTRRSGGGGGRFSSCGGGGGSFGAGG GGGGSFGAGGGFGSRSLVNLGGSKSISISV R F S S R S 1 1 0 0 1 0 0 10 0 0 0 0 0 3 0 4 0 0 0 0 0 0 20 0 1764.7274 CON__P04264;P04264 P04264 46 65 KRT1 Keratin, type II cytoskeletal 1 no no 2 2.1068E-12 228.11 By MS/MS By MS/MS 5 3.06 2 2 2 2 1 1 1 1 1 2 10 5 37694000 37081000 612860 + 4544 471;45 4704 10661;10662;10663;10664;10665;10666;10667;10668;10669;10670;10671;10672;10673;10674;10675 8780;8781;8782;8783;8784;8785;8786;8787;8788;8789;8790;8791;8792;8793;8794 8794 15 1412600 529900 FSSPDEIDLPR ELKEELVLKTQNQPRFSSPDEIDLPRELED NQPRFSSPDEIDLPRELEDEVPILGRNLPW R F S P R E 0 1 0 2 0 0 1 0 0 1 1 0 0 1 2 2 0 0 0 0 0 0 11 0 1274.6143 Q5JRA6 Q5JRA6 632 642 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 0.0041362 106.2 By MS/MS 1.5 0.5 1 1 2 141190 141190 0 4545 1606 4705 10676;10677 8795 8795 1 39769 0 FSSSGGGGGGGR GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC R F S G R F 0 1 0 0 0 0 0 7 0 0 0 0 0 1 0 3 0 0 0 0 0 0 12 0 981.42642 P35527 P35527 35 46 KRT9 Keratin, type I cytoskeletal 9 yes yes 2 3.1233E-13 228.2 By MS/MS By MS/MS 5.74 2.95 2 3 3 3 2 2 2 3 4 3 9 18 153640000 84892000 68752000 + 4546 822 4706 10678;10679;10680;10681;10682;10683;10684;10685;10686;10687;10688;10689;10690;10691;10692;10693;10694;10695;10696;10697;10698;10699;10700;10701;10702;10703;10704 8796;8797;8798;8799;8800;8801;8802;8803;8804;8805;8806;8807;8808;8809;8810;8811;8812;8813;8814;8815;8816;8817;8818;8819;8820 8809 25 6000100 54229000 FSSSGGGGGGGRFSSSSGYGGGSSR GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 2 0 0 0 0 0 11 0 0 0 0 0 2 0 9 0 0 1 0 0 0 25 1 2197.9373 P35527 P35527 35 59 KRT9 Keratin, type I cytoskeletal 9 yes yes 2;3 3.7357E-10 148.33 By MS/MS By MS/MS 4.67 3 4 3 2 2 2 2 1 2 1 2 9 12 15133000 10188000 4945300 + 4547 822 4707 10705;10706;10707;10708;10709;10710;10711;10712;10713;10714;10715;10716;10717;10718;10719;10720;10721;10722;10723;10724;10725 8821;8822;8823;8824;8825;8826;8827;8828;8829;8830;8831;8832;8833;8834;8835;8836;8837;8838;8839;8840;8841;8842;8843;8844;8845;8846;8847 8827 27 632660 4472300 FSSSSGYGGGSSR YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 1234.5214 P35527;CON__P35527 P35527 47 59 KRT9 Keratin, type I cytoskeletal 9 yes no 2 2.6526E-09 203.03 By MS/MS By MS/MS 5.09 3.03 4 2 2 2 2 2 2 2 2 2 10 12 577100000 284150000 292950000 + 4548 822 4708 10726;10727;10728;10729;10730;10731;10732;10733;10734;10735;10736;10737;10738;10739;10740;10741;10742;10743;10744;10745;10746;10747 8848;8849;8850;8851;8852;8853;8854;8855;8856;8857;8858;8859;8860;8861;8862;8863;8864;8865;8866;8867;8868;8869;8870;8871 8861 24 20848000 248940000 FSSSSGYGGGSSRVCGR YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC SSSGYGGGSSRVCGRGGGGSFGYSYGGGSG R F S G R G 0 2 0 0 1 0 0 5 0 0 0 0 0 1 0 6 0 0 1 1 0 0 17 1 1706.7431 P35527;CON__P35527 P35527 47 63 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.026364 69.92 By MS/MS 4.67 2.56 1 1 1 1 1 1 6 2041500 0 2041500 + 4549 822 4709 10748;10749;10750;10751;10752;10753 8872;8873 8873 2 0 2850300 FSSSTEQSSASR STSLGDSDEEDTMSRFSSSTEQSSASRLLK MSRFSSSTEQSSASRLLKRHRRRRKQRPPR R F S S R L 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 6 1 0 0 0 0 0 12 0 1272.5582 O14641;Q92997 O14641 220 231 DVL2;DVL3 Segment polarity protein dishevelled homolog DVL-2;Segment polarity protein dishevelled homolog DVL-3 yes no 2 6.9973E-05 161.19 By MS/MS 4.5 0.5 1 1 2 532230 532230 0 4550 128 4710 10754;10755 8874 8874 1 38865 0 FSTETTFLVDKYEIL QVTKVTQVDGNSPVRFSTETTFLVDKYEIL FSTETTFLVDKYEIL_______________ R F S I L - 0 0 0 1 0 0 2 0 0 1 2 1 0 2 0 1 3 0 1 1 0 0 15 1 1804.9135 P48444 P48444 497 511 ARCN1 Coatomer subunit delta yes yes 2 0.030385 105.36 By MS/MS 6 0 1 1 633320 633320 0 4551 934 4711 10756 8875 8875 1 4353.6 0 FSTLTDDPSPR KEKQEKDKDDLGPDRFSTLTDDPSPRLSAQ GPDRFSTLTDDPSPRLSAQAQVAEDILDKY R F S P R L 0 1 0 2 0 0 0 0 0 0 1 0 0 1 2 2 2 0 0 0 0 0 11 0 1234.583 Q14C86 Q14C86 1011 1021 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.00088939 123.79 By MS/MS 2 0 1 1 370780 370780 0 4552 1466 4712 10757 8876 8876 1 125410 0 FSTSSLLLR FRPKDPYCHPVCANRFSTSSLLLRIRKRTR PVCANRFSTSSLLLRIRKRTRRQKGVLGTE R F S L R I 0 1 0 0 0 0 0 0 0 0 3 0 0 1 0 3 1 0 0 0 0 0 9 0 1022.576 Q9Y5Q8 Q9Y5Q8 79 87 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.00071934 139.97 By MS/MS 5.5 0.5 1 1 2 2068400 2068400 0 4553 2919 4713 10758;10759 8877;8878 8877 2 15758 0 FSTVAGESGSADTVRDPR KVFEHIGKKTPIAVRFSTVAGESGSADTVR VAGESGSADTVRDPRGFAVKFYTEDGNWDL R F S P R G 2 2 0 2 0 0 1 2 0 0 0 0 0 1 1 3 2 0 0 2 0 0 18 1 1850.8759 P04040 P04040 113 130 CAT Catalase yes yes 3 0.0054321 91.969 By matching By MS/MS 2.67 0.943 2 1 1 2 179980 42998 136980 4554 464 4714 10760;10761;10762 8879;8880 8880 2 14544 245300 FSVSPVVR TITTFEHAHNMRVMKFSVSPVVRVAVEAKN HNMRVMKFSVSPVVRVAVEAKNPADLPKLV K F S V R V 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 3 0 0 8 0 889.50215 P13639 P13639 499 506 EEF2 Elongation factor 2 yes yes 2 0.0068542 116.9 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 60200000 60200000 0 4555 602 4715 10763;10764;10765;10766;10767;10768;10769;10770 8881;8882;8883 8883 3 4103000 0 FSYESELFPTFK FDRDVKCIKDFFMKRFSYESELFPTFKDIR MKRFSYESELFPTFKDIRREDTLDVEVSAS R F S F K D 0 0 0 0 0 0 2 0 0 0 1 1 0 3 1 2 1 0 1 0 0 0 12 0 1493.7078 Q9BVS4 Q9BVS4 277 288 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 2 2.9783E-06 194.06 By MS/MS 5.5 0.5 1 1 2 336410 336410 0 4556 2339 4716 10771;10772 8884 8884 1 2951.9 0 FSYICPDR TGSDLLPGAPILSLRFSYICPDRQLRRYLV APILSLRFSYICPDRQLRRYLVLEPDAHAA R F S D R Q 0 1 0 1 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 8 0 1056.4699 Q8N1F8 Q8N1F8 618 625 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.027499 91.318 By MS/MS 3 0 1 1 666440 666440 0 4557 1904 4717 10773 8885 8885 1 12194 0 FSYLAVIEGAK RKFRMGLIQTADQLRFSYLAVIEGAKFIMG DQLRFSYLAVIEGAKFIMGDSSVQDQWKEL R F S A K F 2 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 11 0 1196.6441 P18031 P18031 269 279 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 3.2132E-09 212.21 By MS/MS 7.5 1.12 1 1 1 1 4 16598000 16598000 0 4558 649 4718 10774;10775;10776;10777 8886;8887;8888;8889 8886 4 124180 0 FTAFYASR CTFALPSELERSYQRFTAFYASRHSGRKLT LERSYQRFTAFYASRHSGRKLTWLYQLSKG R F T S R H 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 1 0 0 0 8 0 961.46577 Q13616 Q13616 566 573 CUL1 Cullin-1 yes yes 2 0.0026286 125.31 By MS/MS 4.5 0.5 1 1 2 3490300 3490300 0 4559 1402 4719 10778;10779 8890 8890 1 288750 0 FTAGDFSTTVIQNVNK GEVMREAAFSLAEAKFTAGDFSTTVIQNVN TAGDFSTTVIQNVNKAQVKIRAKKDNVAGV K F T N K A 1 0 2 1 0 1 0 1 0 1 0 1 0 2 0 1 3 0 0 2 0 0 16 0 1740.8683 Q9Y5K8 Q9Y5K8 74 89 ATP6V1D V-type proton ATPase subunit D yes yes 2 4.5949E-17 265.75 By MS/MS 8 0 1 1 626360 626360 0 4560 2914 4720 10780 8891 8891 1 7907.7 0 FTAILYR AEEKRHQKDEAQKEKFTAILYRTLERRRLA KDEAQKEKFTAILYRTLERRRLADDYQQKR K F T Y R T 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 7 0 882.49634 Q8IWC1 Q8IWC1 142 148 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.03963 97.473 By MS/MS 3 0 1 1 516960 516960 0 4561 1866 4721 10781 8892 8892 1 9459 0 FTCIDPIVLQER LLKCSIEYLYREETKFTCIDPIVLQEREFL ETKFTCIDPIVLQEREFLKNYVQRIVDVRP K F T E R E 0 1 0 1 1 1 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 0 12 0 1489.7599 Q9Y2I7 Q9Y2I7 721 732 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 2 0.0081512 94.363 By MS/MS 2 0 1 1 138290 138290 0 4562 2830 4722 10782 8893 8893 1 46776 0 FTDDYQLFEELGK ______________________________ TRFTDDYQLFEELGKGAFSVVRRCVKKTST R F T G K G 0 0 0 2 0 1 2 1 0 0 2 1 0 2 0 0 1 0 1 0 0 0 13 0 1603.7406 Q13555 Q13555 10 22 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 2 1.0181E-07 212.9 By MS/MS 6 0 1 1 1511300 1511300 0 4563 1396 4723 10783 8894 8894 1 10389 0 FTDEEVDELYR QEDYLRELLTTMGDRFTDEEVDELYREAPI MGDRFTDEEVDELYREAPIDKKGNFNYIEF R F T Y R E 0 1 0 2 0 0 3 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 11 0 1414.6252 P19105;O14950 P19105 133 143 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2 2.3364E-09 215.93 By MS/MS 9.5 0.5 1 1 2 927680 927680 0 4564 148 4724 10784;10785 8895 8895 1 23479 0 FTDILVR LKKRLQLPVWEYKDRFTDILVRHQSFVLVG PVWEYKDRFTDILVRHQSFVLVGETGSGKT R F T V R H 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 7 0 862.49125 O43143 O43143 146 152 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.011685 131.04 By MS/MS 3 0.816 1 1 1 3 838570 838570 0 4565 190 4725 10786;10787;10788 8896 8896 1 119670 0 FTDTRKDEQER CKAGIIASARAGETRFTDTRKDEQERCITI GETRFTDTRKDEQERCITIKSTAISLFYEL R F T E R C 0 2 0 2 0 1 2 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 11 2 1423.6692 P13639 P13639 56 66 EEF2 Elongation factor 2 yes yes 2;3;4 9.1093E-05 171.33 By MS/MS 5.4 2.44 1 1 1 3 2 2 2 1 1 1 15 30320000 30320000 0 4566 602 4726 10789;10790;10791;10792;10793;10794;10795;10796;10797;10798;10799;10800;10801;10802;10803 8897;8898;8899;8900 8897 4 2382800 0 FTEDSLLR KIETTVPPSGLNLNRFTEDSLLRHAQFVVE SGLNLNRFTEDSLLRHAQFVVEQVESYDEA R F T L R H 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 8 0 979.49746 P26358 P26358 545 552 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0068542 116.9 By MS/MS 2.5 0.5 1 1 2 1086200 1086200 0 4567 730 4727 10804;10805 8901;8902 8902 2 207360 0 FTEYETQVK KDLKTGHSKGFGFVRFTEYETQVKVMSQRH GFGFVRFTEYETQVKVMSQRHMIDGRWCDC R F T V K V 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 2 0 1 1 0 0 9 0 1143.5448 Q13148 Q13148 152 160 TARDBP TAR DNA-binding protein 43 yes yes 2 0.0014431 128.38 By MS/MS 7.5 0.5 1 1 2 5126100 5126100 0 4568 1358 4728 10806;10807 8903 8903 1 79659 0 FTEYVKDGLK GYGEVTRRGRRQHVRFTEYVKDGLKHTCVK RQHVRFTEYVKDGLKHTCVKFYIEGSEPGK R F T L K H 0 0 0 1 0 0 1 1 0 0 1 2 0 1 0 0 1 0 1 1 0 0 10 1 1198.6234 Q9BVV7 Q9BVV7 180 189 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 9.8681E-07 181.41 By MS/MS 9 0 1 1 1133100 1133100 0 4569 2341 4729 10808 8904 8904 1 22300 0 FTGATIFEEYAR ACAGTLILEFAALSRFTGATIFEEYARKAL LSRFTGATIFEEYARKALDFLWEKRQRSSN R F T A R K 2 1 0 0 0 0 2 1 0 1 0 0 0 2 0 0 2 0 1 0 0 0 12 0 1403.6721 Q9BZQ6 Q9BZQ6 242 253 EDEM3 ER degradation-enhancing alpha-mannosidase-like protein 3 yes yes 2 1.6856E-05 198.62 By MS/MS 4.5 0.5 1 1 2 250800 250800 0 4570 2384 4730 10809;10810 8905 8905 1 19127 0 FTGLESIFR LVCEVDLGDLSPEGRFTGLESIFRAVNYMY LSPEGRFTGLESIFRAVNYMYMGKNTGKIV R F T F R A 0 1 0 0 0 0 1 1 0 1 1 0 0 2 0 1 1 0 0 0 0 0 9 0 1068.5604 Q8N4Q0 Q8N4Q0 343 351 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 3.4541E-07 195.06 By MS/MS 7.5 0.5 1 1 2 667090 667090 0 4571 1917 4731 10811;10812 8906 8906 1 10396 0 FTGLSKEELLK IKVAEDEAEAAAAAKFTGLSKEELLKVAGS AAAKFTGLSKEELLKVAGSPGWVRTRWALL K F T L K V 0 0 0 0 0 0 2 1 0 0 3 2 0 1 0 1 1 0 0 0 0 0 11 1 1263.7075 P08195 P08195 161 171 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 5.1101E-05 172.88 By MS/MS 7 2.55 1 1 1 1 4 14195000 14195000 0 4572 519 4732 10813;10814;10815;10816 8907;8908;8909;8910 8907 4 506170 0 FTGNQIQNR DTLITKLMEKTKYIKFTGNQIQNRIIEVNQ KTKYIKFTGNQIQNRIIEVNQNQKQVEQDI K F T N R I 0 1 2 0 0 2 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1076.5363 O15164 O15164 286 294 TRIM24 Transcription intermediary factor 1-alpha yes yes 2 0.00034303 145.16 By MS/MS 3 0 1 1 0 0 0 4573 167 4733 10817 8911 8911 1 0 0 FTHESQR LRFEPVRGLEAICAKFTHESQRQENHFVEG GLEAICAKFTHESQRQENHFVEGLLYSLDE K F T Q R Q 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 7 0 903.41988 Q15392 Q15392 255 261 DHCR24 Delta(24)-sterol reductase yes yes 2 0.018431 113.5 By MS/MS By matching 4.33 2.36 1 2 2 1 2269800 2258100 11662 4574 1507 4734 10818;10819;10820 8912;8913 8912 2 85247 11950 FTIENVTR SRAIGRIAGKGGKTKFTIENVTRTRIVLAD GKGGKTKFTIENVTRTRIVLADVKVHILGS K F T T R T 0 1 1 0 0 0 1 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 8 0 978.51345 Q9NRX1 Q9NRX1 192 199 PNO1 RNA-binding protein PNO1 yes yes 2 0.0085009 112.41 By MS/MS 8 0 1 1 1341700 1341700 0 4575 2560 4735 10821 8914 8914 1 16939 0 FTLELDR QTSWKPISNQSWDQKFTLELDRSRELEISV SNQSWDQKFTLELDRSRELEISVYWRDWRS K F T D R S 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 7 0 892.46543 Q16513 Q16513 421 427 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.037605 98.997 By MS/MS 3 0 1 1 236280 236280 0 4576 1547 4736 10822 8915 8915 1 4323.3 0 FTLIDGIR YARSGTKIIGKVHEKFTLIDGIRVATGSYS IGKVHEKFTLIDGIRVATGSYSFTWTDGKL K F T I R V 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 1 0 0 0 0 0 8 0 933.52837 Q9H4H8 Q9H4H8 245 252 FAM83D Protein FAM83D yes yes 2 0.025647 93.374 By MS/MS 5 0 1 1 235800 235800 0 4577 2446 4737 10823 8916 8916 1 2365 0 FTMEVPK TLVHAVSVLALWCNRFTMEVPKKLTEWFKK VLALWCNRFTMEVPKKLTEWFKKAFSLKTS R F T P K K 0 0 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 0 7 0 850.42588 Q92616 Q92616 417 423 GCN1L1 Translational activator GCN1 yes yes 2 0.020797 111.65 By MS/MS 2 0 1 1 284130 284130 0 4578 2064 4738 10824 8917 8917 1 96103 0 FTPGTFTNQIQAAFR LKFAAATGATPIAGRFTPGTFTNQIQAAFR FTPGTFTNQIQAAFREPRLLVVTDPRADHQ R F T F R E 2 1 1 0 0 2 0 1 0 1 0 0 0 3 1 0 3 0 0 0 0 0 15 0 1697.8526 P08865 P08865 103 117 RPSA 40S ribosomal protein SA yes yes 2 1.8578E-07 219.43 By MS/MS 7 0 1 1 475960 475960 0 4579 529 4739 10825 8918 8918 1 7471.7 0 FTQAGSEVSALLGR QEGQDVLLFIDNIFRFTQAGSEVSALLGRI RFTQAGSEVSALLGRIPSAVGYQPTLATDM R F T G R I 2 1 0 0 0 1 1 2 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1434.7467 P06576 P06576 311 324 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 7.9056E-24 277.15 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 162730000 162600000 133680 4580 497 4740 10826;10827;10828;10829;10830 8919;8920;8921;8922;8923;8924;8925 8924 7 1246700 136990 FTQDTQPHYIYSPR LTAAMVEFYTMSQERFTQDTQPHYIYSPRE RFTQDTQPHYIYSPREMTRWVRGIFEALRP R F T P R E 0 1 0 1 0 2 0 0 1 1 0 0 0 1 2 1 2 0 2 0 0 0 14 0 1751.8267 Q14204 Q14204 2784 2797 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 6.1917E-05 182.25 By MS/MS 1.5 0.5 2 2 4 3376600 3376600 0 4581 1433 4741 10831;10832;10833;10834 8926;8927 8927 2 1006300 0 FTQLDLEDVQVR KLNKITKFIEENKEKFTQLDLEDVQVREKL KEKFTQLDLEDVQVREKLKHATSKAKKLEK K F T V R E 0 1 0 2 0 2 1 0 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 1461.7464 Q9NTJ3 Q9NTJ3 390 401 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 8.8195E-18 251.81 By MS/MS 2.5 1.12 1 1 1 1 4 723700 723700 0 4582 2575 4742 10835;10836;10837;10838 8928 8928 1 64550 0 FTQNLSAFR MEGIERNLLTKNRDRFTQNLSAFRREVNDS TKNRDRFTQNLSAFRREVNDSMKNSTYGVN R F T F R R 1 1 1 0 0 1 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 9 0 1082.5509 Q9UIA9 Q9UIA9 1058 1066 XPO7 Exportin-7 yes yes 2 0.026338 79.489 By MS/MS 4 0 1 1 739670 739670 0 4583 2740 4743 10839 8929 8929 1 69608 0 FTQQDIDEAK LQSFGKAVDWAKSGKFTQQDIDEAKLSVFS AKSGKFTQQDIDEAKLSVFSTVDAPVAPSD K F T A K L 1 0 0 2 0 2 1 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 10 0 1193.5564 Q5JRX3 Q5JRX3 947 956 PITRM1 Presequence protease, mitochondrial yes yes 2 0.00043383 134.57 By MS/MS 4 0 1 1 385770 385770 0 4584 1607 4744 10840 8930 8930 1 36304 0 FTQSSQK ASVHDMDYVNPRGVRFTQSSQKEGTALVPY YVNPRGVRFTQSSQKEGTALVPYGLPCIRE R F T Q K E 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 7 0 824.40283 Q92538 Q92538 385 391 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.048248 90.986 By MS/MS 2 0 1 1 148540 148540 0 4585 2050 4745 10841 8931 8931 1 50243 0 FTREDPTFK SNKNDLEKFSKGIGRFTREDPTFKVYFDTE SKGIGRFTREDPTFKVYFDTENKETVISGM R F T F K V 0 1 0 1 0 0 1 0 0 0 0 1 0 2 1 0 2 0 0 0 0 0 9 1 1139.5611 Q96RP9 Q96RP9 473 481 GFM1 Elongation factor G, mitochondrial yes yes 2 0.010699 119.21 By MS/MS 5 0 1 1 979780 979780 0 4586 2223 4746 10842 8932 8932 1 9826.6 0 FTSSSDIPVEFIR AGIMLLLRSIRLTSKFTSSSDIPVEFIRRN SKFTSSSDIPVEFIRRNVKLRGRLRRITEN K F T I R R 0 1 0 1 0 0 1 0 0 2 0 0 0 2 1 3 1 0 0 1 0 0 13 0 1496.7511 Q6P1S2 Q6P1S2 62 74 C3orf33 Protein C3orf33 yes yes 2 0.0014346 118.28 By MS/MS 8.5 0.5 1 1 2 681510 681510 0 4587 1704 4747 10843;10844 8933 8933 1 9111.9 0 FTVAELK EAPKLSKKKLRRMNRFTVAELKQLVARPDV KKLRRMNRFTVAELKQLVARPDVVEMHDVT R F T L K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 7 0 806.4538 Q13435 Q13435 460 466 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.038374 98.418 By MS/MS 3 0 1 1 800240 800240 0 4588 1384 4748 10845 8934 8934 1 14642 0 FTVDQTQTPSLK RESFPNDLQFNILMRFTVDQTQTPSLKVKV LMRFTVDQTQTPSLKVKVAILKYIETLAKQ R F T L K V 0 0 0 1 0 2 0 0 0 0 1 1 0 1 1 1 3 0 0 1 0 0 12 0 1363.6983 O75122 O75122 780 791 CLASP2 CLIP-associating protein 2 yes yes 2 1.4719E-25 289.96 By MS/MS 3.5 0.5 1 1 2 1006900 1006900 0 4589 292 4749 10846;10847 8935 8935 1 32123 0 FVADGIFK ______________________________ QISKKRKFVADGIFKAELNEFLTRELAEDG K F V F K A 1 0 0 1 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 1 0 0 8 0 895.48035 P23396 P23396 11 18 RPS3 40S ribosomal protein S3 yes yes 2 0.020242 99.375 By MS/MS 8.5 1.12 1 1 1 1 4 11232000 11232000 0 4590 703 4750 10848;10849;10850;10851 8936 8936 1 173140 0 FVAFSGEGQSLR RPLVKKVEEDEAGGRFVAFSGEGQSLRKKG GGRFVAFSGEGQSLRKKGRKP_________ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 2.4333E-05 175.49 By MS/MS 7 0 1 1 3950300 3950300 0 4591 2075 4751 10852 8937 8937 1 62012 0 FVAGALGPTNK RKAAEEVTLQTGIKRFVAGALGPTNKTLSV GIKRFVAGALGPTNKTLSVSPSVERPDYRN R F V N K T 2 0 1 0 0 0 0 2 0 0 1 1 0 1 1 0 1 0 0 1 0 0 11 0 1073.5869 Q99707 Q99707 141 151 MTR Methionine synthase yes yes 2 0.00050581 131.44 By MS/MS 3 0 1 1 913120 913120 0 4592 2260 4752 10853 8938 8938 1 16708 0 FVAGVGANSK RMTLKQLKDRYPRKRFVAGVGANSKISALK YPRKRFVAGVGANSKISALKGSKGKDCEIP R F V S K I 2 0 1 0 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 10 0 948.50288 A4D1E9 A4D1E9 67 76 GTPBP10 GTP-binding protein 10 yes yes 2 0.033175 80.455 By MS/MS 5.5 1.12 1 1 1 1 4 3539100 3539100 0 4593 15 4753 10854;10855;10856;10857 8939 8939 1 137270 0 FVASCGFTPDVK NQMNNTHAAVSPCGRFVASCGFTPDVKVWE CGRFVASCGFTPDVKVWEVCFGKKGEFQEV R F V V K V 1 0 0 1 1 0 0 1 0 0 0 1 0 2 1 1 1 0 0 2 0 0 12 0 1326.6278 Q9Y4P3 Q9Y4P3 243 254 TBL2 Transducin beta-like protein 2 yes yes 2 7.8632E-10 225.01 By MS/MS 7 0 1 1 2706100 2706100 0 4594 2899 4754 10858 8940 8940 1 42481 0 FVCEGTVEEK RIYRVGQQKDVVIHRFVCEGTVEEKILQLQ VVIHRFVCEGTVEEKILQLQEKKKDLAKQV R F V E K I 0 0 0 0 1 0 3 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1196.5383 Q9UNY4 Q9UNY4 1116 1125 TTF2 Transcription termination factor 2 yes yes 2 1.6175E-07 185.58 By MS/MS 3.5 0.5 1 1 2 557700 557700 0 4595 2795 4755 10859;10860 8941 8941 1 18372 0 FVCNDDVYSGPLK GPLSAKGTADAFIVRFVCNDDVYSGPLKFL VRFVCNDDVYSGPLKFLHQDIDSGQGIRNT R F V L K F 0 0 1 2 1 0 0 1 0 0 1 1 0 1 1 1 0 0 1 2 0 0 13 0 1512.6919 P11717 P11717 1040 1052 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 2.7315E-05 183.99 By MS/MS 2 0.707 1 2 1 4 1717800 1717800 0 4596 583 4756 10861;10862;10863;10864 8942;8943 8943 2 444850 0 FVDLYGAQK VFGLGFPPCLGGPFRFVDLYGAQKIVDRLK LGGPFRFVDLYGAQKIVDRLKKYEAAYGKQ R F V Q K I 1 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 1 1 0 0 9 0 1039.5338 P40939 P40939 720 728 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.039348 93.429 By matching By MS/MS 5 0 2 1 1 15121000 14978000 143120 4597 865 4757 10865;10866 8944 8944 1 150220 120190 FVEGVCPFCGYEEAR EQLRCEHCARFLADRFVEGVCPFCGYEEAR FVEGVCPFCGYEEARGDQCDKCGKLINAVE R F V A R G 1 1 0 0 2 0 3 2 0 0 0 0 0 2 1 0 0 0 1 2 0 0 15 0 1818.7705 P56192 P56192 400 414 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 1.9017E-05 199.4 By MS/MS 4 0 1 1 3245600 3245600 0 4598 1067 4758 10867 8945 8945 1 305430 0 FVEKYTELQK AFDLFNPNFKSTCQRFVEKYTELQKLGETD STCQRFVEKYTELQKLGETDEEKLFVETGK R F V Q K L 0 0 0 0 0 1 2 0 0 0 1 2 0 1 0 0 1 0 1 1 0 0 10 1 1283.6762 Q9Y3D9 Q9Y3D9 99 108 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 8.6844E-10 209.21 By MS/MS By matching 9 0 4 3 1 5746600 5709300 37249 4599 2875 4759 10868;10869;10870;10871 8946;8947;8948 8946 3 112360 84940 FVELPGAEMGK TKARVAPEKKQDVGKFVELPGAEMGKVTVR DVGKFVELPGAEMGKVTVRFPPEASGYLHI K F V G K V 1 0 0 0 0 0 2 2 0 0 1 1 1 1 1 0 0 0 0 1 0 0 11 0 1176.5849 P07814 P07814 187 197 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0010228 120.45 By MS/MS 2.5 0.5 2 2 4 3175400 3175400 0 4600 512 4760;4761 10872;10873;10874;10875 8949;8950 8949 217 2 113850 0 FVEQLGSYDPLPNSHGEK YRIVAAHNKCPRDGRFVEQLGSYDPLPNSH QLGSYDPLPNSHGEKLVALNLDRIRHWIGC R F V E K L 0 0 1 1 0 1 2 2 1 0 2 1 0 1 2 2 0 0 1 1 0 0 18 0 2015.9589 Q9Y3D3 Q9Y3D3 47 64 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2;3 0.00036754 158.91 By MS/MS By matching 9 0.894 2 1 2 4 1 43726000 43495000 230480 4601 2871 4762 10876;10877;10878;10879;10880 8951;8952 8952 2 891560 311020 FVESVDEYQFVER LRLLSQTQGPPDYPRFVESVDEYQFVERLL PRFVESVDEYQFVERLLPATRIPDPPKHEH R F V E R L 0 1 0 1 0 1 3 0 0 0 0 0 0 2 0 1 0 0 1 3 0 0 13 0 1645.7624 Q13405 Q13405 38 50 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 7.86E-25 289.59 By MS/MS 10 0 1 1 2013600 2013600 0 4602 1378 4763 10881 8953 8953 1 108520 0 FVGDADLER LMANGTLTRRHQNGRFVGDADLERQKFSDL RHQNGRFVGDADLERQKFSDLKLNGPQDHS R F V E R Q 1 1 0 2 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1020.4876 O60716 O60716 69 77 CTNND1 Catenin delta-1 yes yes 2 0.038891 80.755 By MS/MS 4 0 1 1 2975100 2975100 0 4603 272 4764 10882 8954 8954 1 279970 0 FVGPGGYNLK PVVETVQVPLSKRAKFVGPGGYNLKKLQAE SKRAKFVGPGGYNLKKLQAETGVTISQVDE K F V L K K 0 0 1 0 0 0 0 3 0 0 1 1 0 1 1 0 0 0 1 1 0 0 10 0 1050.5498 Q8TCS8 Q8TCS8 620 629 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.022362 91.626 By MS/MS 5 0 1 1 1050000 1050000 0 4604 1992 4765 10883 8955 8955 1 10531 0 FVGQDVEGER VNPVWKKCLEEQGLKFVGQDVEGERMEIVE EQGLKFVGQDVEGERMEIVELEDHPFFVGV K F V E R M 0 1 0 1 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 10 0 1134.5306 P17812 P17812 499 508 CTPS1 CTP synthase 1 yes yes 2 0.001416 115.57 By MS/MS 5.5 0.5 1 1 2 2696700 2696700 0 4605 645 4766 10884;10885 8956 8956 1 24528 0 FVGTDPASDEVVLMK AEGMENMADAVTHARFVGTDPASDEVVLMK FVGTDPASDEVVLMKILQVLRTLLLTPVGA R F V M K I 1 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 3 0 0 15 0 1606.7913 Q92538 Q92538 121 135 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 2.5044E-07 216.91 By MS/MS 2 0 2 2 766430 766430 0 4606 2050 4767;4768 10886;10887 8957;8958 8957 989 2 259240 0 FVGVNASDINYSAGR PVPLPGDGDLLVRNRFVGVNASDINYSAGR FVGVNASDINYSAGRYDPSVKPPFDIGFEG R F V G R Y 2 1 2 1 0 0 0 2 0 1 0 0 0 1 0 2 0 0 1 2 0 0 15 0 1568.7583 Q8N4Q0 Q8N4Q0 71 85 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 1.7214E-16 255.41 By MS/MS 7 0 1 1 1681900 1681900 0 4607 1917 4769 10888 8959 8959 1 26403 0 FVHGEGLR GFTLAPSLGCFVGSRFVHGEGLRWYAGLQK GCFVGSRFVHGEGLRWYAGLQKPSWHPPHW R F V L R W 0 1 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 913.477 P30536 P30536 25 32 TSPO Translocator protein yes yes 3 0.011183 113.41 By MS/MS 9.5 0.5 1 1 2 2251200 2251200 0 4608 775 4770 10889;10890 8960 8960 1 109270 0 FVIGGPQGDAGLTGR YLDEDTIYHLQPSGRFVIGGPQGDAGLTGR FVIGGPQGDAGLTGRKIIVDTYGGWGAHGG R F V G R K 1 1 0 1 0 1 0 5 0 1 1 0 0 1 1 0 1 0 0 1 0 0 15 0 1443.747 P31153 P31153 250 264 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 2 3.6102E-05 195.72 By MS/MS By matching 7 0 2 1 1 2563300 2528400 34953 4609 785 4771 10891;10892 8961 8961 1 39691 62950 FVIQGAGAK MEDPGVRDTMLQALRFVIQGAGAKVDAVIR MLQALRFVIQGAGAKVDAVIRKNIVSLLLS R F V A K V 2 0 0 0 0 1 0 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 9 0 889.50215 Q92616 Q92616 2410 2418 GCN1L1 Translational activator GCN1 yes yes 2 0.0075506 104.75 By MS/MS 1.5 0.5 1 1 2 2667700 2667700 0 4610 2064 4772 10893;10894 8962 8962 1 891520 0 FVKQDQVCIAR LVDKKSGEKSKTRPRFVKQDQVCIARLRTA TRPRFVKQDQVCIARLRTAGTICLETFKDF R F V A R L 1 1 0 1 1 2 0 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 11 1 1362.7078 P15170;Q8IYD1 P15170 446 456 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 3 0.0029467 104.82 By MS/MS 3.33 1.7 1 1 1 3 2371500 2371500 0 4611 623 4773 10895;10896;10897 8963;8964 8964 2 88745 0 FVLCPECENPETDLHVNPK EANKLQDMLDGFIKKFVLCPECENPETDLH PECENPETDLHVNPKKQTIGNSCKACGYRG K F V P K K 0 0 2 1 2 0 3 0 1 0 2 1 0 1 3 0 1 0 0 2 0 0 19 0 2297.0457 P55010 P55010 96 114 EIF5 Eukaryotic translation initiation factor 5 yes yes 3 0.00026947 114.06 By MS/MS 6 0 1 1 4596300 4596300 0 4612 1050 4774 10898 8965 8965 1 31596 0 FVLSQAKDEL VSEHSGGRDLDSLHRFVLSQAKDEL_____ DSLHRFVLSQAKDEL_______________ R F V E L - 1 0 0 1 0 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 1 1148.6077 Q8NBS9 Q8NBS9 423 432 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.02008 107.69 By MS/MS 6 0 1 1 1713900 1713900 0 4613 1944 4775 10899 8966 8966 1 11782 0 FVNLGIEPPK KLREVVETPLLHPERFVNLGIEPPKGVLLF LHPERFVNLGIEPPKGVLLFGPPGTGKTLC R F V P K G 0 0 1 0 0 0 1 1 0 1 1 1 0 1 2 0 0 0 0 1 0 0 10 0 1112.623 P35998 P35998 201 210 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.002019 112.3 By MS/MS 7 0 1 1 730840 730840 0 4614 831 4776 10900 8967 8967 1 11473 0 FVNLISER GTDELRLLYGMALVRFVNLISERKTKFAKV YGMALVRFVNLISERKTKFAKVPLKCLAQE R F V E R K 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 8 0 976.53418 Q9Y4W2 Q9Y4W2 122 129 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2 0.033017 88.948 By MS/MS 4 0 1 1 577130 577130 0 4615 2901 4777 10901 8968 8968 1 54312 0 FVNLYTR AKAQENSNSVKKKTKFVNLYTREGQDRLAV NSVKKKTKFVNLYTREGQDRLAVLLPGRHP K F V T R E 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 7 0 911.4865 Q15650 Q15650 149 155 TRIP4 Activating signal cointegrator 1 yes yes 2 0.038234 98.523 By MS/MS 5 0 1 1 874180 874180 0 4616 1523 4778 10902 8969 8969 1 8767.6 0 FVNQLKGESR ASYCIEHGDLELAAKFVNQLKGESRRVAQD ELAAKFVNQLKGESRRVAQDWLKEARMTLE K F V S R R 0 1 1 0 0 1 1 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 1 1176.6251 Q16891 Q16891 709 718 IMMT MICOS complex subunit MIC60 yes yes 2;3 0.0014945 140.17 By MS/MS 4 0 2 2 2839800 2839800 0 4617 1563 4779 10903;10904 8970;8971 8971 2 267240 0 FVNVVPTFGK KKTGRAKRRMQYNRRFVNVVPTFGKKKGPN QYNRRFVNVVPTFGKKKGPNANS_______ R F V G K K 0 0 1 0 0 0 0 1 0 0 0 1 0 2 1 0 1 0 0 3 0 0 10 0 1106.6124 P62861 P62861 42 51 FAU 40S ribosomal protein S30 yes yes 2 0.011013 92.051 By MS/MS By matching 10 0 2 1 1 9183900 9112600 71283 4618 1179 4780 10905;10906 8972 8972 1 491140 91262 FVQCPDGELQK FTRARDYDAMGSQTKFVQCPDGELQKRKEV SQTKFVQCPDGELQKRKEVVHTVSLHEIDV K F V Q K R 0 0 0 1 1 2 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 11 0 1319.618 Q9Y230 Q9Y230 224 234 RUVBL2 RuvB-like 2 yes yes 2 0.00080027 125.57 By MS/MS 6.5 0.5 1 1 2 43200000 43200000 0 4619 2810 4781 10907;10908 8973;8974 8973 2 303870 0 FVQDTLKGDGVTEIR LRGALEMVQMAVEAKFVQDTLKGDGVTEIR FVQDTLKGDGVTEIRMRFIRRIEDNLPAGE K F V I R M 0 1 0 2 0 1 1 2 0 1 1 1 0 1 0 0 2 0 0 2 0 0 15 1 1676.8733 O43617 O43617 150 164 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2;3 0.0017691 124.48 By MS/MS 9.5 0.5 2 2 4 2666200 2666200 0 4620 222 4782 10909;10910;10911;10912 8975;8976 8976 2 88557 0 FVQETELSQR LVRRNVELFIATSQKFVQETELSQRIRDWE ATSQKFVQETELSQRIRDWEDTVQPLLQEQ K F V Q R I 0 1 0 0 0 2 2 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1235.6146 Q6IBW4 Q6IBW4 485 494 NCAPH2 Condensin-2 complex subunit H2 yes yes 2 2.45E-05 164.97 By MS/MS 4.5 0.5 1 1 2 1092400 1092400 0 4621 1682 4783 10913;10914 8977;8978 8977 2 63934 0 FVSDATPQAEVYLR KEQYLDVLHALKVVRFVSDATPQAEVYLRM RFVSDATPQAEVYLRMYQLESGKLPRSPSF R F V L R M 2 1 0 1 0 1 1 0 0 0 1 0 0 1 1 1 1 0 1 2 0 0 14 0 1594.7991 Q9P0N9 Q9P0N9 97 110 TBC1D7 TBC1 domain family member 7 yes yes 2 0.00036029 177.83 By MS/MS 8 0 1 1 839130 839130 0 4622 2667 4784 10915 8979 8979 1 10594 0 FVSFLGR QPPIDNIIRAGLIPKFVSFLGRTDCSPIQF IRAGLIPKFVSFLGRTDCSPIQFESAWALT K F V G R T 0 1 0 0 0 0 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 7 0 824.45447 P52292 P52292 124 130 KPNA2 Importin subunit alpha-1 yes yes 2 0.022145 110.63 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 7373500 7373500 0 4623 1013 4785 10916;10917;10918;10919;10920;10921;10922;10923;10924;10925 8980 8980 1 250750 0 FVSISDLLVPK EIRPALELLEPIEQKFVSISDLLVPKDLGT IEQKFVSISDLLVPKDLGTESQIFISRTYD K F V P K D 0 0 0 1 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 2 0 0 11 0 1216.7067 P50395 P50395 380 390 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 0.0004208 133.13 By MS/MS 6.5 0.5 1 1 2 331270 331270 0 4624 972 4786 10926;10927 8981 8981 1 3029.9 0 FVSTTSQNTQLVRPPIR TVKSNRSSNMTATTKFVSTTSQNTQLVRPP STTSQNTQLVRPPIRSHHSNTRDTVKQGIS K F V I R S 0 2 1 0 0 2 0 0 0 1 1 0 0 1 2 2 3 0 0 2 0 0 17 1 1943.0589 Q8WWK9 Q8WWK9 242 258 CKAP2 Cytoskeleton-associated protein 2 yes yes 3 0.038247 63.727 By MS/MS 4.5 0.5 1 1 2 2760100 2760100 0 4625 2035 4787 10928;10929 8982 8982 1 150550 0 FVSTTYSGVTR SSGGVKSSGGSSSVKFVSTTYSGVTR____ SSVKFVSTTYSGVTR_______________ K F V T R - 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 2 3 0 1 2 0 0 11 0 1216.6088 CON__P04264;P04264 P04264 634 644 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.011838 108.43 By MS/MS 2 0 1 1 593090 0 593090 + 4626 471;45 4788 10930 8983 8983 1 0 838740 FVTDSNAVVQLK EKSPEWSKFLGLIKKFVTDSNAVVQLKGLE IKKFVTDSNAVVQLKGLEAALVYVENAHVA K F V L K G 1 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 3 0 0 12 0 1319.7085 Q14008 Q14008 56 67 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.8527E-08 217.66 By MS/MS 2.5 0.5 1 1 2 2446300 2446300 0 4627 1417 4789 10931;10932 8984;8985 8984 2 702520 0 FVTSNTQELGK AQKMGRKDPEQEVEKFVTSNTQELGKDKWL EVEKFVTSNTQELGKDKWLCPLSGKKFKGP K F V G K D 0 0 1 0 0 1 1 1 0 0 1 1 0 1 0 1 2 0 0 1 0 0 11 0 1222.6194 Q9BXP5 Q9BXP5 700 710 SRRT Serrate RNA effector molecule homolog yes yes 2 0.00079269 138.08 By MS/MS 3 0 1 1 676650 676650 0 4628 2358 4790 10933 8986 8986 1 12381 0 FVTVQTISGTGALR ELALGENSEVLKSGRFVTVQTISGTGALRI RFVTVQTISGTGALRIGASFLQRFFKFSRD R F V L R I 1 1 0 0 0 1 0 2 0 1 1 0 0 1 0 1 3 0 0 2 0 0 14 0 1448.7987 P00505 P00505 126 139 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 3.7615E-33 308.6 By MS/MS 7 0 1 1 4269600 4269600 0 4629 446 4791 10934 8987 8987 1 67025 0 FVVEKAEQQK VEAKQVAQQEAERARFVVEKAEQQKKAAII AERARFVVEKAEQQKKAAIISAEGDSKAAE R F V Q K K 1 0 0 0 0 2 2 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 10 1 1204.6452 P35232 P35232 198 207 PHB Prohibitin yes yes 2 3.7144E-10 218.73 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 34480000 34087000 393690 4630 814 4792 10935;10936;10937;10938;10939 8988;8989;8990;8991 8989 4 441700 531270 FVVEKAEQQKK VEAKQVAQQEAERARFVVEKAEQQKKAAII ERARFVVEKAEQQKKAAIISAEGDSKAAEL R F V K K A 1 0 0 0 0 2 2 0 0 0 0 3 0 1 0 0 0 0 0 2 0 0 11 2 1332.7402 P35232 P35232 198 208 PHB Prohibitin yes yes 2;3;4 1.0855E-12 232.83 By MS/MS By MS/MS 8.29 0.452 5 2 5 2 63572000 62231000 1341800 4631 814 4793 10940;10941;10942;10943;10944;10945;10946 8992;8993;8994;8995 8994 4 788710 1810700 FVVLETGGEAGITR EPQLCEVLQVAGPDRFVVLETGGEAGITRS RFVVLETGGEAGITRSVVATTRARVCRRKY R F V T R S 1 1 0 0 0 0 2 3 0 1 1 0 0 1 0 0 2 0 0 2 0 0 14 0 1447.7671 Q7Z2W4 Q7Z2W4 49 62 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.105E-07 220.29 By MS/MS 5 0.816 1 1 1 3 3662500 3662500 0 4632 1778 4794 10947;10948;10949 8996;8997 8996 1 260660 0 FVVQNVSAQK SDPQGVPYPEAKIGRFVVQNVSAQKDGEKS AKIGRFVVQNVSAQKDGEKSRVKVKVRVNT R F V Q K D 1 0 1 0 0 2 0 0 0 0 0 1 0 1 0 1 0 0 0 3 0 0 10 0 1118.6084 Q92598 Q92598 462 471 HSPH1 Heat shock protein 105 kDa yes yes 2 0.0035261 104.05 By MS/MS 4 0 1 1 811880 811880 0 4633 2059 4795 10950 8998 8998 1 76403 0 FWEVISDEHGIDPTGTYHGDSDLQLDR VHIQAGQCGNQIGAKFWEVISDEHGIDPTG PTGTYHGDSDLQLDRISVYYNEATGGKYVP K F W D R I 0 1 0 5 0 1 2 3 2 2 2 0 0 1 1 2 2 1 1 1 0 0 27 0 3101.4003 P07437 P07437 20 46 TUBB Tubulin beta chain yes yes 4 0.016873 47.796 By MS/MS 6 0 1 1 1228700 1228700 0 4634 509 4796 10951 8999 8999 1 8446.1 0 FYDDAIVSQK PRDIDAFWLQRQLSRFYDDAIVSQKKADEV RQLSRFYDDAIVSQKKADEVLEILKTASDD R F Y Q K K 1 0 0 2 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 10 0 1184.5714 O75643 O75643 275 284 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00017335 148.94 By MS/MS 2 0.816 1 1 1 3 2281400 2281400 0 4635 340 4797 10952;10953;10954 9000;9001 9000 2 640640 0 FYEAFSK ELFSELAEDKENYKKFYEAFSKNLKLGIHE EDKENYKKFYEAFSKNLKLGIHEDSTNRRR K F Y S K N 1 0 0 0 0 0 1 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 7 0 890.41742 P08238 P08238 429 435 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.017937 114.78 By MS/MS 5 1.41 1 1 1 1 1 5 39016000 39016000 0 4636 521 4798 10955;10956;10957;10958;10959 9002;9003 9002 2 3093300 0 FYEEVHDLER ALKNLQVKCAQIEAKFYEEVHDLERKYAVL QIEAKFYEEVHDLERKYAVLYQPLFDKRFE K F Y E R K 0 1 0 1 0 0 3 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1335.6095 P55209;Q99733 P55209 95 104 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 2 6.4448E-05 156.35 By MS/MS 7.5 1.12 1 1 1 1 4 12636000 12636000 0 4637 1058;2264 4799 10960;10961;10962;10963 9004;9005 9005 2 111480 0 FYEEVHDLERK ALKNLQVKCAQIEAKFYEEVHDLERKYAVL IEAKFYEEVHDLERKYAVLYQPLFDKRFEI K F Y R K Y 0 1 0 1 0 0 3 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1463.7045 P55209;Q99733 P55209 95 105 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 2;3 5.6515E-05 151.22 By MS/MS 6.33 0.471 2 1 3 9509900 9509900 0 4638 1058;2264 4800 10964;10965;10966 9006;9007 9007 2 72801 0 FYEQFSK ELFTELAEDKENYKKFYEQFSKNIKLGIHE EDKENYKKFYEQFSKNIKLGIHEDSQNRKK K F Y S K N 0 0 0 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 7 0 947.43888 P07900 P07900 437 443 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0075022 145.34 By MS/MS By matching 4.14 1.96 1 1 2 1 1 1 4 3 34277000 33559000 717580 4639 513 4801 10967;10968;10969;10970;10971;10972;10973 9008;9009;9010 9008 3 2729700 1031000 FYFHDGVR EYTEQVVKLMVPLLKFYFHDGVRVAAAESM LMVPLLKFYFHDGVRVAAAESMPLLLECAR K F Y V R V 0 1 0 1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 1 1 0 0 8 0 1039.4876 O00410 O00410 713 720 IPO5 Importin-5 yes yes 2 0.021211 98.299 By MS/MS 4.5 0.5 1 1 2 2396300 2396300 0 4640 103 4802 10974;10975 9011 9011 1 194060 0 FYGELALK SRLMDEFKIGELFSKFYGELALKKKIPDTV IGELFSKFYGELALKKKIPDTVLEKVYELL K F Y L K K 1 0 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 8 0 939.50657 P78527 P78527 156 163 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0068542 116.9 By MS/MS 3 1.41 1 1 1 1 1 5 1961500 1961500 0 4641 1225 4803 10976;10977;10978;10979;10980 9012 9012 1 405390 0 FYGELALKK SRLMDEFKIGELFSKFYGELALKKKIPDTV GELFSKFYGELALKKKIPDTVLEKVYELLG K F Y K K K 1 0 0 0 0 0 1 1 0 0 2 2 0 1 0 0 0 0 1 0 0 0 9 1 1067.6015 P78527 P78527 156 164 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.020868 107.29 By MS/MS 1.5 0.5 1 1 2 755980 755980 0 4642 1225 4804 10981;10982 9013 9013 1 230220 0 FYGPAGPYGIFAGR LAVNGKVFDVTKGSKFYGPAGPYGIFAGRD KFYGPAGPYGIFAGRDASRGLATFCLDKDA K F Y G R D 2 1 0 0 0 0 0 4 0 1 0 0 0 2 2 0 0 0 2 0 0 0 14 0 1471.7248 O15173 O15173 136 149 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 0.00042697 141.2 By MS/MS 8.5 0.5 1 1 2 246660 246660 0 4643 168 4805 10983;10984 9014;9015 9015 2 3788.3 0 FYGPEGPYGVFAGR MAINGKVFDVTKGRKFYGPEGPYGVFAGRD KFYGPEGPYGVFAGRDASRGLATFCLDKEA K F Y G R D 1 1 0 0 0 0 1 4 0 0 0 0 0 2 2 0 0 0 2 1 0 0 14 0 1515.7147 O00264 O00264 106 119 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 1.6916E-06 202.96 By MS/MS 9 0.816 1 1 1 3 4190600 4190600 0 4644 96 4806 10985;10986;10987 9016;9017 9016 2 63817 0 FYIEGSEPGK FTEYVKDGLKHTCVKFYIEGSEPGKQGTVY HTCVKFYIEGSEPGKQGTVYAQVKENPGSG K F Y G K Q 0 0 0 0 0 0 2 2 0 1 0 1 0 1 1 1 0 0 1 0 0 0 10 0 1125.5342 Q9BVV7 Q9BVV7 195 204 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 1.7671E-05 169.44 By MS/MS 9 0 1 1 1868700 1868700 0 4645 2341 4807 10988 9018 9018 1 36776 0 FYNAGLAYCHSK HHLGRIHFHNLQGEKFYNAGLAYCHSKLAN GEKFYNAGLAYCHSKLANILFTQELARRLK K F Y S K L 2 0 1 0 1 0 0 1 1 0 1 1 0 1 0 1 0 0 2 0 0 0 12 0 1429.6449 Q8TC12 Q8TC12 195 206 RDH11 Retinol dehydrogenase 11 yes yes 2;3 0.0013652 124.1 By MS/MS 8 0 2 2 5050100 5050100 0 4646 1988 4808 10989;10990 9019;9020 9020 2 63757 0 FYNELTEILVR DNFVELVANLKEGTKFYNELTEILVRFQNK EGTKFYNELTEILVRFQNKCSDIVFARKTE K F Y V R F 0 1 1 0 0 0 2 0 0 1 2 0 0 1 0 0 1 0 1 1 0 0 11 0 1395.7398 Q8WUM4 Q8WUM4 676 686 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 1.0956E-18 261.03 By MS/MS 4 0 1 1 129530 129530 0 4647 2018 4809 10991 9021 9021 1 12190 0 FYNLVLLPR TRIFASNLKERMAQRFYNLVLLPRVRDDVA ERMAQRFYNLVLLPRVRDDVAEYKRLNFHL R F Y P R V 0 1 1 0 0 0 0 0 0 0 3 0 0 1 1 0 0 0 1 1 0 0 9 0 1133.6597 Q13895 Q13895 249 257 BYSL Bystin yes yes 2 0.030839 104.21 By MS/MS 6 0 1 1 832030 832030 0 4648 1413 4810 10992 9022 9022 0 5719.6 0 FYPLEIDYGQDEEAVK GNAWHSKNFTKYPKKFYPLEIDYGQDEEAV YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP K F Y V K K 1 0 0 2 0 1 3 1 0 1 1 1 0 1 1 0 0 0 2 1 0 0 16 0 1914.8887 P09874 P09874 638 653 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00014321 180.3 By MS/MS 4 0 1 1 613440 613440 0 4649 543 4811 10993 9023 9023 1 57728 0 FYQGFLFSEKPEK NCAISVICCVFNELKFYQGFLFSEKPEKNL LKFYQGFLFSEKPEKNLLIFENLIDLKRRY K F Y E K N 0 0 0 0 0 1 2 1 0 0 1 2 0 3 1 1 0 0 1 0 0 0 13 1 1618.8031 P78527 P78527 1961 1973 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0013912 136.81 By MS/MS 2 0 1 1 172110 172110 0 4650 1225 4812 10994 9024 9024 1 58213 0 FYQPYSEDTQQQIIR AILIFNNHGKPRLSKFYQPYSEDTQQQIIR FYQPYSEDTQQQIIRETFHLVSKRDENVCN K F Y I R E 0 1 0 1 0 4 1 0 0 2 0 0 0 1 1 1 1 0 2 0 0 0 15 0 1914.9112 Q92572 Q92572 19 33 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 4.156E-24 313.52 By MS/MS 9 0 1 1 1417800 1417800 0 4651 2056 4813 10995 9025 9025 1 27902 0 FYQVPVPLPDR CEPMIGLVPILKGGRFYQVPVPLPDRRRRF KGGRFYQVPVPLPDRRRRFLAMKWMITECR R F Y D R R 0 1 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 2 0 0 11 0 1329.7081 Q9Y2R9 Q9Y2R9 167 177 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.0072728 100.48 By MS/MS 8 0 1 1 7830000 7830000 0 4652 2841 4814 10996 9026 9026 1 98853 0 FYQVPVPLPDRR CEPMIGLVPILKGGRFYQVPVPLPDRRRRF GGRFYQVPVPLPDRRRRFLAMKWMITECRD R F Y R R R 0 2 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 2 0 0 12 1 1485.8092 Q9Y2R9 Q9Y2R9 167 178 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.010224 109.44 By MS/MS 8 0 1 1 1163900 1163900 0 4653 2841 4815 10997 9027 9027 1 14695 0 FYSLLDPSYAK ALLMLTGKISPWTGRFYSLLDPSYAKNNIP WTGRFYSLLDPSYAKNNIPIIASVSEHQPT R F Y A K N 1 0 0 1 0 0 0 0 0 0 2 1 0 1 1 2 0 0 2 0 0 0 11 0 1302.6496 P46977 P46977 330 340 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 1.6473E-06 182.65 By MS/MS 3 1.41 1 1 1 1 1 5 2235900 2235900 0 4654 923 4816 10998;10999;11000;11001;11002 9028;9029;9030;9031;9032;9033;9034 9029 7 481290 0 FYSLPQSPQQFK GGAKEFLVPSREPGKFYSLPQSPQQFKQLL PGKFYSLPQSPQQFKQLLMVGGLDRYFQVA K F Y F K Q 0 0 0 0 0 3 0 0 0 0 1 1 0 2 2 2 0 0 1 0 0 0 12 0 1468.7351 Q6PI48 Q6PI48 236 247 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00020657 137.98 By MS/MS 5 0 1 1 1532400 1532400 0 4655 1717 4817 11003 9035 9035 1 15369 0 FYSVNVDYSK NPEPWNKLGPNDQYKFYSVNVDYSKLKKER NDQYKFYSVNVDYSKLKKERPDF_______ K F Y S K L 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 0 0 2 2 0 0 10 0 1220.5714 O00483 O00483 64 73 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 6.9022E-08 195.79 By MS/MS By matching 10 0 2 1 1 23060000 23013000 47491 4656 109 4818 11004;11005 9036 9036 1 1240300 60802 FYSVYGSGQR PIQDIWYHEDRIRAKFYSVYGSGQRAFDLF RIRAKFYSVYGSGQRAFDLFNPNFKSTCQR K F Y Q R A 0 1 0 0 0 1 0 2 0 0 0 0 0 1 0 2 0 0 2 1 0 0 10 0 1162.5407 Q9Y3D9 Q9Y3D9 74 83 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.0002246 145.46 By MS/MS 9 0 1 1 11171000 11171000 0 4657 2875 4819 11006 9037 9037 1 219850 0 FYTEDSPGLK SAGRTTSAGTGGMWRFYTEDSPGLKVGPVP GGMWRFYTEDSPGLKVGPVPVLVMSLLFIA R F Y L K V 0 0 0 1 0 0 1 1 0 0 1 1 0 1 1 1 1 0 1 0 0 0 10 0 1155.5448 P60468 P60468 58 67 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.00060671 131.22 By MS/MS 10 0 1 1 5096300 5096300 0 4658 1091 4820 11007 9038 9038 1 274670 0 FYTIEILKVE ICPDDAAVIPIKNNRFYTIEILKVE_____ IKNNRFYTIEILKVE_______________ R F Y V E - 0 0 0 0 0 0 2 0 0 2 1 1 0 1 0 0 1 0 1 1 0 0 10 1 1253.6907 P12273 P12273 137 146 PIP Prolactin-inducible protein yes yes 2 0.017222 129.85 By MS/MS 9.5 0.5 1 1 2 90053 0 90053 4659 591 4821 11008;11009 9039;9040 9040 2 0 163120 FYTQQWEDYR LLKDGEDLMDESVLKFYTQQWEDYRFSSKV ESVLKFYTQQWEDYRFSSKVLNGICAYLNR K F Y Y R F 0 1 0 1 0 2 1 0 0 0 0 0 0 1 0 0 1 1 2 0 0 0 10 0 1434.6204 Q13616 Q13616 118 127 CUL1 Cullin-1 yes yes 2 1.7867E-07 183.72 By MS/MS 4.5 0.5 1 1 2 1111900 1111900 0 4660 1402 4822 11010;11011 9041;9042 9042 2 89177 0 FYVHNDIFR MQTFVLAPEGSVANKFYVHNDIFRYQDEVF GSVANKFYVHNDIFRYQDEVFGGFVTEPQE K F Y F R Y 0 1 1 1 0 0 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 9 0 1209.5931 Q13283 Q13283 124 132 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2;3 0.0018445 130.75 By MS/MS 5 0 2 2 2449500 2449500 0 4661 1368 4823 11012;11013 9043;9044 9044 2 24568 0 GAAAAEADRTLFVGNLETK ______________________________ AEADRTLFVGNLETKVTEELLFELFHQAGP M G A T K V 5 1 1 1 0 0 2 2 0 0 2 1 0 1 0 0 2 0 0 1 0 0 19 1 1932.9905 Q9Y580 Q9Y580 2 20 RBM7 RNA-binding protein 7 yes yes 2 0.00014794 157.07 By MS/MS 8 0 1 1 210110 210110 0 4662 2907 4824 11014 9045 9045 1 2652.6 0 GAAACDLVQR RSGRGLDGAVDMGARGAAACDLVQRFVREA DMGARGAAACDLVQRFVREAQSQGAQVFQA R G A Q R F 3 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1059.5131 Q8IZ83 Q8IZ83 346 355 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 0.023682 97.635 By MS/MS 4 0 1 1 330380 330380 0 4663 1892 4825 11015 9046 9046 0 31091 0 GAAAHPDSEEQQQR KILADATAKMVEAAKGAAAHPDSEEQQQRL KGAAAHPDSEEQQQRLREAAEGLRMATNAA K G A Q R L 3 1 0 1 0 3 2 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 14 0 1522.676 Q9Y490 Q9Y490 876 889 TLN1 Talin-1 yes yes 2;3 5.5584E-05 188.15 By MS/MS 2 0 2 2 1951300 1951300 0 4664 2888 4826 11016;11017 9047;9048 9048 2 660020 0 GAAALRR ______________________________ ______________________________ R G A R R S 3 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 713.42966 Q9GZT3 Q9GZT3 8 14 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.054426 120.06 By MS/MS By matching 10 0 2 1 1 15952000 15832000 119320 4665 2398 4827 11018;11019 9049 9049 1 853310 152770 GAAASPEPAR ATALALLLAWLLVRRGAAASPEPARAPPEP LLVRRGAAASPEPARAPPEPAPPAEATGAP R G A A R A 4 1 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 10 0 925.46174 P84157 P84157 30 39 MXRA7 Matrix-remodeling-associated protein 7 yes yes 2 0.0085324 97.635 By MS/MS 7 0 1 1 259650 259650 0 4666 1249 4828 11020 9050 9050 1 4076.1 0 GAAATTTTTEHR EEYRRRRHTMDKDSRGAAATTTTTEHRFFR DSRGAAATTTTTEHRFFRRSVICDSNATAL R G A H R F 3 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 5 0 0 0 0 0 12 0 1215.5844 Q9H4A3 Q9H4A3 67 78 WNK1 Serine/threonine-protein kinase WNK1 yes yes 2 0.039397 74.944 By MS/MS 1 0 1 1 49653 49653 0 4667 2443 4829 11021 9051 9051 1 11965 0 GAADVEKVEEK EVKERTEEPMETEPKGAADVEKVEEKSAID TEPKGAADVEKVEEKSAIDLTPIVVEDKEE K G A E K S 2 0 0 1 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 2 0 0 11 1 1173.5877 Q14839 Q14839 1637 1647 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 8.4043E-05 166.66 By MS/MS 2 0 1 1 1450800 1450800 0 4668 1459 4830 11022 9052 9052 1 490720 0 GAAGALLVYDITR AGQESFRSITRSYYRGAAGALLVYDITRRD YRGAAGALLVYDITRRDTFNHLTTWLEDAR R G A T R R 3 1 0 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 1 1 0 0 13 0 1318.7245 P61019;Q8WUD1 P61019 78 90 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 0.00036009 146.11 By MS/MS 9 0 1 1 225880 225880 0 4669 1105 4831 11023 9053;9054 9053 2 4445.3 0 GAALITAVACR KCDVSFLQSEDGSGKGAALITAVACRIREA GSGKGAALITAVACRIREAGQR________ K G A C R I 4 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1101.5965 P52789 P52789 900 910 HK2 Hexokinase-2 yes yes 2 0.0050819 103.7 By MS/MS 4 0 1 1 1074700 1074700 0 4670 1023 4832 11024 9055 9055 1 101130 0 GAALITAVGVR KCNVSFLLSEDGSGKGAALITAVGVRLRTE GSGKGAALITAVGVRLRTEASS________ K G A V R L 3 1 0 0 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1026.6186 P19367 P19367 900 910 HK1 Hexokinase-1 yes yes 2 0.0004208 133.13 By MS/MS 4 0 1 1 923240 923240 0 4671 660 4833 11025 9056 9056 1 86883 0 GAANHDLTDTTR GVLSLSGRKLREFPRGAANHDLTDTTRADL FPRGAANHDLTDTTRADLSRNRLSEIPIEA R G A T R A 2 1 1 2 0 0 0 1 1 0 1 0 0 0 0 0 3 0 0 0 0 0 12 0 1270.5902 Q96II8 Q96II8 75 86 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 2 0.018724 85.924 By MS/MS 4 0 1 1 408430 408430 0 4672 2174 4834 11026 9057 9057 1 38436 0 GAAQLSILVK FCSLVSQNLGPLDERGAAQLSILVKGFSRQ PLDERGAAQLSILVKGFSRQSSLLFKILSS R G A V K G 2 0 0 0 0 1 0 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 10 0 998.61243 Q9UGJ1 Q9UGJ1 608 617 TUBGCP4 Gamma-tubulin complex component 4 yes yes 2 0.010011 99.013 By MS/MS 5 0 1 1 281850 281850 0 4673 2721 4835 11027 9058 9058 0 2826.8 0 GAAVNLTLVTPEK LIKTVRSEGYFGMYRGAAVNLTLVTPEKAI YRGAAVNLTLVTPEKAIKLAANDFFRHQLS R G A E K A 2 0 1 0 0 0 1 1 0 0 2 1 0 0 1 0 2 0 0 2 0 0 13 0 1311.7398 Q9H936;Q9H1K4 Q9H936 68 80 SLC25A22;SLC25A18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 yes no 2 2.9642E-05 212.89 By MS/MS 8 0 1 1 3399100 3399100 0 4674 2480 4836 11028 9059 9059 1 42913 0 GAAYGLAGLVK LMQQLLESDKYAERKGAAYGLAGLVKGLGI AERKGAAYGLAGLVKGLGILSLKQQEMMAA K G A V K G 3 0 0 0 0 0 0 3 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1018.5811 Q92616 Q92616 1396 1406 GCN1L1 Translational activator GCN1 yes yes 2 0.00022616 147.34 By MS/MS 2.5 0.5 1 1 2 1865000 1865000 0 4675 2064 4837 11029;11030 9060;9061 9060 2 548970 0 GADFLVTEVENGGSLGSK IYVDDGLISLQVKQKGADFLVTEVENGGSL FLVTEVENGGSLGSKKGVNLPGAAVDLPAV K G A S K K 1 0 1 1 0 0 2 4 0 0 2 1 0 1 0 2 1 0 0 2 0 0 18 0 1778.8687 P14618 P14618 189 206 PKM Pyruvate kinase PKM yes yes 2 2.4334E-57 350.18 By MS/MS 6.5 0.5 1 1 2 6834600 6834600 0 4676 614 4838 11031;11032 9062;9063 9062 2 48829 0 GADIMYTGTVDCWR FDTVRRRMMMQSGRKGADIMYTGTVDCWRK KGADIMYTGTVDCWRKIFRDEGGKAFFKGA K G A W R K 1 1 0 2 1 0 0 2 0 1 0 0 1 0 0 0 2 1 1 1 0 0 14 0 1643.7072 P12235;P12236 P12236 246 259 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0006498 131.12 By MS/MS 1 0 1 1 162210 162210 0 4677 589;588 4839 11033 9064 9064 275 1 39089 0 GADVFLEALAR TLYFFIAGRYEFSNKGADVFLEALARLNYL FSNKGADVFLEALARLNYLLRVNGSEQTVV K G A A R L 3 1 0 1 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 11 0 1160.619 P13807 P13807 338 348 GYS1 Glycogen [starch] synthase, muscle yes yes 2 1.651E-05 167.12 By MS/MS 4.5 0.5 1 1 2 478550 478550 0 4678 607 4840 11034;11035 9065;9066 9065 2 21509 0 GAEAANVTGPGGVPVQGSK GDGETVEFDVVEGEKGAEAANVTGPGGVPV ANVTGPGGVPVQGSKYAADRNHYRRYPRRR K G A S K Y 3 0 1 0 0 1 1 5 0 0 0 1 0 0 2 1 1 0 0 3 0 0 19 0 1694.8588 P67809 P67809 119 137 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 2 2.667E-17 305.98 By MS/MS 6.5 0.5 1 1 2 5003700 5003700 0 4679 1206 4841 11036;11037 9067 9067 1 40979 0 GAEADQIIEYLK ______________________________ EQKGAEADQIIEYLKQQVSLLKEKAILQAT K G A L K Q 2 0 0 1 0 1 2 1 0 2 1 1 0 0 0 0 0 0 1 0 0 0 12 0 1348.6874 Q12904 Q12904 15 26 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 1.6914E-05 169.52 By MS/MS 7.5 0.5 1 1 2 1975300 1975300 0 4680 1337 4842 11038;11039 9068;9069 9068 2 30310 0 GAEDDLNTVAAGTMTGMLYK ALLYSAFGVIIEKTRGAEDDLNTVAAGTMT LNTVAAGTMTGMLYKCTGGLRGIARGGLTG R G A Y K C 3 0 1 2 0 0 1 3 0 0 2 1 2 0 0 0 3 0 1 1 0 0 20 0 2056.9445 O14925;Q5SRD1 O14925 150 169 TIMM23;TIMM23B Mitochondrial import inner membrane translocase subunit Tim23;Putative mitochondrial import inner membrane translocase subunit Tim23B yes no 2 1.8219E-90 385.68 By MS/MS 9 0 1 1 911740 911740 0 4681 145 4843 11040 9070 9070 83;84 1 17943 0 GAEILEVLHSLPAVR MIALERPDLREKVIKGAEILEVLHSLPAVR GAEILEVLHSLPAVRQYLFSLYECRYSVFF K G A V R Q 2 1 0 0 0 0 2 1 1 1 3 0 0 0 1 1 0 0 0 2 0 0 15 0 1602.9093 Q15008 Q15008 243 257 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0032154 108.56 By MS/MS 7 0 1 1 57204 57204 0 4682 1471 4844 11041 9071 9071 1 898 0 GAEQLAEGGR NSLQLHGLQLRIATRGAEQLAEGGRMVYST RIATRGAEQLAEGGRMVYSTCSLNPIEDEA R G A G R M 2 1 0 0 0 1 2 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 0 986.47812 Q08J23 Q08J23 306 315 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.001173 120.27 By MS/MS 4.5 0.5 1 1 2 1610800 1610800 0 4683 1317 4845 11042;11043 9072 9072 1 121170 0 GAFGEATLYR EQEELHYIPIRVLGRGAFGEATLYRRTEDD RVLGRGAFGEATLYRRTEDDSLVVWKEVDL R G A Y R R 2 1 0 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 1 0 0 0 10 0 1083.5349 Q8TD19 Q8TD19 61 70 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.0014511 114.89 By MS/MS 4 0 1 1 881550 881550 0 4684 1995 4846 11044 9073 9073 1 82959 0 GAFGEVQLVR QMKAEDYDVVKVIGRGAFGEVQLVRHKASQ KVIGRGAFGEVQLVRHKASQKVYAMKLLSK R G A V R H 1 1 0 0 0 1 1 2 0 0 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1074.5822 O75116;Q13464 O75116 101 110 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 2 0.0008733 126.07 By MS/MS 3 0 1 1 455780 455780 0 4685 291;1389 4847 11045 9074 9074 1 8339.4 0 GAFGKPQGTVAR MLSCAGADRLQTGMRGAFGKPQGTVARVHI GMRGAFGKPQGTVARVHIGQVIMSIRTKLQ R G A A R V 2 1 0 0 0 1 0 3 0 0 0 1 0 1 1 0 1 0 0 1 0 0 12 1 1187.6411 P27635;Q96L21 P27635 117 128 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 2 0.0067812 118.23 By MS/MS 8.5 0.5 1 1 2 3204300 3204300 0 4686 743 4848 11046;11047 9075 9075 1 52918 0 GAFQTGQGPLDAQVK SEFLLKLIHILSTERGAFQTGQGPLDAQVK GAFQTGQGPLDAQVKLLEFTLEQNFEVVSV R G A V K L 2 0 0 1 0 3 0 3 0 0 1 1 0 1 1 0 1 0 0 1 0 0 15 0 1515.7682 Q9NR09 Q9NR09 2824 2838 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 1.029E-16 270.93 By MS/MS 1.5 0.5 1 1 2 876050 876050 0 4687 2543 4849 11048;11049 9076;9077 9076 2 249880 0 GAGAESSHPVR DEVLTIPEVKVHSGRGAGAESSHPVRNAQS HSGRGAGAESSHPVRNAQSNALQEREDDRV R G A V R N 2 1 0 0 0 0 1 2 1 0 0 0 0 0 1 2 0 0 0 1 0 0 11 0 1066.5156 P11717 P11717 2426 2436 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.031579 89.08 By MS/MS 1.5 0.5 1 1 2 90732 90732 0 4688 583 4850 11050;11051 9078;9079 9078 2 30689 0 GAGGTIITNFER YKNGWIVMIAIGWARGAGGTIITNFERLVK WARGAGGTIITNFERLVKGDWKPEGDEWLK R G A E R L 1 1 1 0 0 0 1 3 0 2 0 0 0 1 0 0 2 0 0 0 0 0 12 0 1234.6306 Q9NVV0 Q9NVV0 152 163 TMEM38B Trimeric intracellular cation channel type B yes yes 2 0.0007468 129.88 By MS/MS 1.5 0.5 1 1 2 221220 221220 0 4689 2604 4851 11052;11053 9080 9080 1 58683 0 GAGGVAGGPAAGPGR ______________________________ GAGGVAGGPAAGPGRSPGESALLDGWLQRG R G A G R S 4 1 0 0 0 0 0 7 0 0 0 0 0 0 2 0 0 0 0 1 0 0 15 0 1150.5843 Q96A46 Q96A46 7 21 SLC25A28 Mitoferrin-2 yes yes 2 0.0076924 95.775 By MS/MS 7 0 1 1 950630 950630 0 4690 2103 4852 11054 9081 9081 1 14923 0 GAGIGGLGITVEGPSESK EAFTNKPNVFTVVTRGAGIGGLGITVEGPS IGGLGITVEGPSESKINCRDNKDGSCSAEY R G A S K I 1 0 0 0 0 0 2 6 0 2 1 1 0 0 1 2 1 0 0 1 0 0 18 0 1627.8417 O75369 O75369 1355 1372 FLNB Filamin-B yes yes 2 0.00020849 143.42 By MS/MS 1.5 0.5 1 1 2 295120 295120 0 4691 315 4853 11055;11056 9082 9082 1 88080 0 GAGSIAGASASPK KSVEEVASEIQPFLRGAGSIAGASASPKEK LRGAGSIAGASASPKEKYSLVEAKRKKLIS R G A P K E 4 0 0 0 0 0 0 3 0 1 0 1 0 0 1 3 0 0 0 0 0 0 13 0 1072.5513 P15924 P15924 2014 2026 DSP Desmoplakin yes yes 2 0.0039803 123.67 By matching By MS/MS 4.67 3.77 2 1 1 2 1622400 1393800 228560 4692 628 4854 11057;11058;11059 9083;9084 9083 2 471460 307390 GAGTGGLGLAVEGPSEAK SGTTNKPNKFTVETRGAGTGGLGLAVEGPS TGGLGLAVEGPSEAKMSCMDNKDGSCSVEY R G A A K M 3 0 0 0 0 0 2 6 0 0 2 1 0 0 1 1 1 0 0 1 0 0 18 0 1569.7999 P21333 P21333 1382 1399 FLNA Filamin-A yes yes 2 2.3647E-11 237.07 By MS/MS By matching 2.83 1.34 1 2 1 1 1 5 1 5822500 5716500 105920 4693 677 4855 11060;11061;11062;11063;11064;11065 9085;9086;9087 9085 3 1422700 149790 GAGTGGLGLTVEGPCEAK GGLVGKPAEFTIDTKGAGTGGLGLTVEGPC TGGLGLTVEGPCEAKIECSDNGDGTCSVSY K G A A K I 2 0 0 0 1 0 2 6 0 0 2 1 0 0 1 0 2 0 0 1 0 0 18 0 1672.809 O75369 O75369 1067 1084 FLNB Filamin-B no no 2 0.00024651 181.98 By MS/MS 1.5 0.5 1 1 2 612140 612140 0 4694 315 4856 11066;11067 9088;9089 9089 2 188990 0 GAGWLFGAK WSDPEDVDTWAISPRGAGWLFGAKVTNEFV WAISPRGAGWLFGAKVTNEFVHINNLKLIC R G A A K V 2 0 0 0 0 0 0 3 0 0 1 1 0 1 0 0 0 1 0 0 0 0 9 0 905.47594 O00743 O00743 211 219 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.0018834 122.79 By MS/MS 8 0 1 1 428980 428980 0 4695 117 4857 11068 9090 9090 1 5415.8 0 GAIDHYVTPVK PITRKSVGHRMGGGKGAIDHYVTPVKAGRL GGGKGAIDHYVTPVKAGRLVVEMGGRCEFE K G A V K A 1 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 1 2 0 0 11 0 1198.6346 Q9NX20 Q9NX20 145 155 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 1.9964E-05 125.97 By MS/MS 8 0 1 1 1844400 1844400 0 4696 2617 4858 11069 9091 9091 1 23286 0 GAIENCCR QDLTLYNPERTITVKGAIENCCRAEQEIMK ERTITVKGAIENCCRAEQEIMKKVREAYEN K G A C R A 1 1 1 0 2 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 978.40113 Q9NZI8 Q9NZI8 331 338 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.018199 101.64 By MS/MS 5 0 1 1 842760 842760 0 4697 2649 4859 11070 9092 9092 1 8452.5 0 GAIILAK GLGVKCSKEVATAIRGAIILAKLSIVPVRR KEVATAIRGAIILAKLSIVPVRRGYWGNKI R G A A K L 2 0 0 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 7 0 684.45341 P15880 P15880 153 159 RPS2 40S ribosomal protein S2 yes yes 2 0.023062 109.94 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 27644000 27608000 36128 4698 627 4860 11071;11072;11073;11074;11075;11076 9093 9093 1 332030 37021 GAIVRDLENLGER TAATLKRTIEALMDRGAIVRDLENLGERAL DRGAIVRDLENLGERALPYRISAHSQQHNR R G A E R A 1 2 1 1 0 0 2 2 0 1 2 0 0 0 0 0 0 0 0 1 0 0 13 1 1440.7685 P82932 P82932 33 45 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.010507 112.15 By MS/MS 10 0 1 1 160600 160600 0 4699 1238 4861 11077 9094 9094 1 8656 0 GAKAEEILEK GIRRNEKIAVHCTVRGAKAEEILEKGLKVR HCTVRGAKAEEILEKGLKVREYELRKNNFS R G A E K G 2 0 0 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1086.5921 P62913 P62913 76 85 RPL11 60S ribosomal protein L11 yes yes 2;3 7.9857E-07 185.6 By MS/MS 9.33 0.471 2 1 3 4784800 4784800 0 4700 1186 4862 11078;11079;11080 9095;9096;9097 9096 3 101680 0 GAKDCVEAAK SFPRSGTQSDKVTLKGAKDCVEAAKKRIQE KVTLKGAKDCVEAAKKRIQEIIEDLEAQVT K G A A K K 3 0 0 1 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1047.5019 Q00341 Q00341 851 860 HDLBP Vigilin yes yes 2 0.00072094 150.81 By MS/MS 3 0 1 1 678260 678260 0 4701 1260 4863 11081 9098 9098 1 12410 0 GAKLTPEEEEILNK QWYESHYALPLGRKKGAKLTPEEEEILNKK KGAKLTPEEEEILNKKRSKKIQKKYDERKK K G A N K K 1 0 1 0 0 0 4 1 0 1 2 2 0 0 1 0 1 0 0 0 0 0 14 1 1569.825 P62241 P62241 126 139 RPS8 40S ribosomal protein S8 yes yes 3 0.00030985 157.33 By MS/MS 8 0 1 1 1213800 1213800 0 4702 1143 4864 11082 9099 9099 1 15325 0 GALAETGAGAK PYSFFTKLTADELWKGALAETGAGAKKGRG ELWKGALAETGAGAKKGRGKRTKKKKRKDL K G A A K K 4 0 0 0 0 0 1 3 0 0 1 1 0 0 0 0 1 0 0 0 0 0 11 0 944.49271 P82675 P82675 101 111 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.00022616 140.83 By MS/MS 6 0.816 1 1 1 3 13495000 13495000 0 4703 1233 4865 11083;11084;11085 9100 9100 1 137680 0 GALALAQAVQR AFDAVKCTHWAEGGKGALALAQAVQRAAQA EGGKGALALAQAVQRAAQAPSSFQLLYDLK K G A Q R A 4 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1096.6353 P11586 P11586 794 804 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 2.3046E-05 161.02 By MS/MS 4.5 0.5 1 1 2 8146200 8146200 0 4704 582 4866 11086;11087 9101 9101 1 735760 0 GALALEEKR ERDELADEIANSSGKGALALEEKRRLEARI ANSSGKGALALEEKRRLEARIAQLEEELEE K G A K R R 2 1 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 985.55564 P35579 P35579 1717 1725 MYH9 Myosin-9 yes yes 2 0.036759 99.139 By MS/MS 2 0 1 1 263230 263230 0 4705 824 4867 11088 9102 9102 1 89035 0 GALFGANANR SRLDLIAQQMMPEVRGALFGANANRKFLD_ MPEVRGALFGANANRKFLD___________ R G A N R K 3 1 2 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 10 0 989.50428 P36543 P36543 213 222 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 2 0.0015278 113.41 By MS/MS 8 0 1 1 1580800 1580800 0 4706 836 4868 11089 9103 9103 1 19958 0 GALPLDTVTFYK LLLSAPHGGSGLHTKGALPLDTVTFYKVIP HTKGALPLDTVTFYKVIPKSKFVLVKFDTQ K G A Y K V 1 0 0 1 0 0 0 1 0 0 2 1 0 1 1 0 2 0 1 1 0 0 12 0 1323.7075 P30040 P30040 37 48 ERP29 Endoplasmic reticulum resident protein 29 yes yes 2 0.00020333 150.27 By MS/MS 8 0 1 1 421720 421720 0 4707 761 4869 11090 9104 9104 1 5324.2 0 GALQNIIPASTGAAK KTVDGPSGKLWRDGRGALQNIIPASTGAAK GALQNIIPASTGAAKAVGKVIPELNGKLTG R G A A K A 4 0 1 0 0 1 0 2 0 2 1 1 0 0 1 1 1 0 0 0 0 0 15 0 1410.7831 P04406 P04406 201 215 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0073529 108.56 By MS/MS By MS/MS 5.62 3.18 2 1 1 2 1 1 2 1 2 5 8 9771600 6823300 2948300 4708 473 4870 11091;11092;11093;11094;11095;11096;11097;11098;11099;11100;11101;11102;11103 9105;9106;9107;9108;9109;9110;9111;9112;9113;9114 9113 10 193340 1589000 GALTGGYYDTR TMDCITLEGDQVSHRGALTGGYYDTRKSRL VSHRGALTGGYYDTRKSRLELQKDVRKAEE R G A T R K 1 1 0 1 0 0 0 3 0 0 1 0 0 0 0 0 2 0 2 0 0 0 11 0 1172.5462 Q9UQE7 Q9UQE7 662 672 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.0235E-05 172.98 By MS/MS 3 0 1 1 2341500 2341500 0 4709 2807 4871 11104 9115 9115 1 42843 0 GALTGGYYDTRK TMDCITLEGDQVSHRGALTGGYYDTRKSRL SHRGALTGGYYDTRKSRLELQKDVRKAEEE R G A R K S 1 1 0 1 0 0 0 3 0 0 1 1 0 0 0 0 2 0 2 0 0 0 12 1 1300.6412 Q9UQE7 Q9UQE7 662 673 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.003943 101.38 By MS/MS 3 0 1 1 225090 225090 0 4710 2807 4872 11105 9116 9116 1 4118.6 0 GALTLSSPEVR LNKLAKILKKRRIEKGALTLSSPEVRFHMD RIEKGALTLSSPEVRFHMDSETHDPIDLQT K G A V R F 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 2 1 0 0 1 0 0 11 0 1128.6139 Q9Y2L1 Q9Y2L1 628 638 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.00010068 151.83 By MS/MS 3.5 0.5 1 1 2 3542100 3542100 0 4711 2834 4873 11106;11107 9117 9117 1 311760 0 GALTTVEGLITR RIPELDFEIPAFSQKGALTTVEGLITRAIS SQKGALTTVEGLITRAISGLEQDQPARRAN K G A T R A 1 1 0 0 0 0 1 2 0 1 2 0 0 0 0 0 3 0 0 1 0 0 12 0 1229.698 O75312 O75312 141 152 ZPR1 Zinc finger protein ZPR1 yes yes 2 1.9389E-08 205.18 By MS/MS 6 0 1 1 514330 514330 0 4712 309 4874 11108 9118 9118 1 3535.6 0 GALVTVGQLSCYDQAK GLRRLFSGATMASSRGALVTVGQLSCYDQA ALVTVGQLSCYDQAKQLVLSTGYLSDNIFT R G A A K Q 2 0 0 1 1 2 0 2 0 0 2 1 0 0 0 1 1 0 1 2 0 0 16 0 1708.8454 Q9UBX3 Q9UBX3 171 186 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 2.6961E-70 396.52 By MS/MS 8.5 0.5 1 1 2 18062000 18062000 0 4713 2709 4875 11109;11110 9119 9119 1 230570 0 GALYCELCYEK HCKNTMAYIGFVEEKGALYCELCYEKFFAP VEEKGALYCELCYEKFFAPECGRCQRKILG K G A E K F 1 0 0 0 2 0 2 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 11 0 1404.6054 Q96HC4 Q96HC4 463 473 PDLIM5 PDZ and LIM domain protein 5 yes yes 2 1.38E-05 169.65 By MS/MS 5 0 1 1 1284100 1284100 0 4714 2164 4876 11111 9120 9120 1 12879 0 GANAVGYTNYPDNVVFK LRELIPNIPFQMLLRGANAVGYTNYPDNVV NAVGYTNYPDNVVFKFCEVAKENGMDVFRV R G A F K F 2 0 3 1 0 0 0 2 0 0 0 1 0 1 1 0 1 0 2 3 0 0 17 0 1827.8792 P11498 P11498 645 661 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.000279 174.21 By MS/MS 4 0.816 1 1 1 3 1342400 1342400 0 4715 580 4877 11112;11113;11114 9121 9121 1 77895 0 GANDFMCDEMER IKNTKARTSASIILRGANDFMCDEMERSLH ILRGANDFMCDEMERSLHDALCVVKRVLES R G A E R S 1 1 1 2 1 0 2 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 12 0 1473.5323 P17987 P17987 379 390 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.0129E-17 248.98 By MS/MS 6.33 0.471 2 1 3 18749000 18749000 0 4716 648 4878;4879 11115;11116;11117 9122;9123 9122 316 1 132420 0 GANPVEIRR LARSIAKEGFEKISKGANPVEIRRGVMLAV FEKISKGANPVEIRRGVMLAVDAVIAELKK K G A R R G 1 2 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1010.5621 P10809 P10809 134 142 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.04844 93.143 By MS/MS By matching 7.14 1.81 2 1 1 1 1 1 6 1 47941000 47920000 21327 4717 569 4880 11118;11119;11120;11121;11122;11123;11124 9124 9124 1 350480 17910 GANQWIK LGYHIYSSDPPFEVRGANQWIKFKSVS___ SDPPFEVRGANQWIKFKSVS__________ R G A I K F 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 7 0 815.42899 P08559 P08559 379 385 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.02729 106.76 By MS/MS 7 0 1 1 1813400 1813400 0 4718 524 4881 11125 9125 9125 1 28468 0 GAPAAATAPAPTAHK FKLNRKKLEGGGERRGAPAAATAPAPTAHK GAPAAATAPAPTAHKAKKAAPGAAGSRRAD R G A H K A 7 0 0 0 0 0 0 1 1 0 0 1 0 0 3 0 2 0 0 0 0 0 15 0 1330.6993 Q92522 Q92522 129 143 H1FX Histone H1x yes yes 2 0.00038545 139.32 By MS/MS 8 0 1 1 253940 253940 0 4719 2049 4882 11126 9126 9126 1 3205.9 0 GAPANVSSSDLTGR SRVDRERKVSMRLHRGAPANVSSSDLTGRQ RGAPANVSSSDLTGRQEVSRIPASQTSVPF R G A G R Q 2 1 1 1 0 0 0 2 0 0 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1330.6477 P49674 P49674 383 396 CSNK1E Casein kinase I isoform epsilon yes yes 2 0.0015742 114.87 By MS/MS 7 0 1 1 618200 618200 0 4720 955 4883 11127 9127 9127 1 9704.6 0 GAPEGVIDR PNKPSRTSMSKMFVKGAPEGVIDRCTHIRV SKMFVKGAPEGVIDRCTHIRVGSTKVPMTS K G A D R C 1 1 0 1 0 0 1 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 912.46649 P16615;O14983 P16615 515 523 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 0.044646 78.264 By MS/MS 2.5 1.12 1 1 1 1 4 2858900 2858900 0 4721 635 4884 11128;11129;11130;11131 9128;9129 9128 2 478150 0 GAPNPWLFEEPEETR PDLIRSSLMSEEAKRGAPNPWLFEEPEETR GAPNPWLFEEPEETRGLGFDEIRQQQQKII R G A T R G 1 1 1 0 0 0 4 1 0 0 1 0 0 1 3 0 1 1 0 0 0 0 15 0 1770.8213 Q9UNK0 Q9UNK0 119 133 STX8 Syntaxin-8 yes yes 2 0.0017791 121.56 By MS/MS 8.5 0.5 1 1 2 280410 280410 0 4722 2789 4885 11132;11133 9130 9130 1 3862.3 0 GAPQHYPK GASRFSASSGGGGSRGAPQHYPKTAGNSEF SGGGGSRGAPQHYPKTAGNSEFLGKTPGQN R G A P K T 1 0 0 0 0 1 0 1 1 0 0 1 0 0 2 0 0 0 1 0 0 0 8 0 896.45045 P78344 P78344 24 31 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0051312 124.89 By MS/MS 6.33 2.62 1 1 1 3 2298600 2298600 0 4723 1219 4886 11134;11135;11136 9131;9132 9131 2 189000 0 GAQDVAGGSNPGAHNPSANLAR WFQPVANAADAEAVRGAQDVAGGSNPGAHN GSNPGAHNPSANLARGDNQAGGAAAAAAAP R G A A R G 5 1 3 1 0 1 0 4 1 0 1 0 0 0 2 2 0 0 0 1 0 0 22 0 2059.9784 O14654 O14654 1177 1198 IRS4 Insulin receptor substrate 4 yes yes 3 0.00027639 103.41 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 5203100 5203100 0 4724 129 4887 11137;11138;11139;11140;11141;11142 9133;9134;9135;9136 9134 4 291330 0 GAQGVILVYDVTR AGQERFRTLTPSYYRGAQGVILVYDVTRRD YRGAQGVILVYDVTRRDTFVKLDNWLNELE R G A T R R 1 1 0 1 0 1 0 2 0 1 1 0 0 0 0 0 1 0 1 3 0 0 13 0 1389.7616 Q9NP72 Q9NP72 80 92 RAB18 Ras-related protein Rab-18 yes yes 2 0.00025868 176.18 By MS/MS 7 1.41 1 1 1 1 1 5 10926000 10926000 0 4725 2524 4888 11143;11144;11145;11146;11147 9137 9137 1 87878 0 GAQMVDKAGWIK ______________________________ KPRGAQMVDKAGWIKKSSGGLLGFWKDRYL R G A I K K 2 0 0 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 1 0 0 12 1 1302.6754 Q8TD55 Q8TD55 15 26 PLEKHO2 Pleckstrin homology domain-containing family O member 2 yes yes 3 0.048938 61.353 By MS/MS 7 0 1 1 0 0 0 4726 1996 4889 11148 9138 9138 969 1 0 0 GAQTAAATAPR LPATTLGGACLQASRGAQTAAATAPRIKKF QASRGAQTAAATAPRIKKFAIYRWDPDKAG R G A P R I 5 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 11 0 1013.5254 P21912 P21912 28 38 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.00027578 136.49 By MS/MS 8 0 1 1 771900 771900 0 4727 683 4890 11149 9139 9139 1 9745.1 0 GASDEEIKR ______________________________ TLGLARGASDEEIKRAYRRQALRYHPDKNK R G A K R A 1 1 0 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 9 1 1003.4934 P25685 P25685 14 22 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 2.8946E-08 176.09 By MS/MS 7 0 1 1 0 0 0 4728 722 4891 11150 9140 9140 1 0 0 GASIVEDKLVEDLR DDPNFFKMVEGFFDRGASIVEDKLVEDLRT RGASIVEDKLVEDLRTRESEEQKRNRVRGI R G A L R T 1 1 0 2 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 2 0 0 14 1 1542.8253 P00367 P00367 77 90 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 3 0.012977 140.01 By MS/MS 6 0 1 1 4814400 4814400 0 4729 441 4892 11151 9141 9141 1 33095 0 GASKEILSEVER ITDCKDPKACTILLRGASKEILSEVERNLQ LLRGASKEILSEVERNLQDAMQVCRNVLLD R G A E R N 1 1 0 0 0 0 3 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 1 1316.6936 P49368 P49368 378 389 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 1.129E-05 196.24 By MS/MS 6.88 1.69 2 2 2 1 1 8 62182000 62182000 0 4730 947 4893 11152;11153;11154;11155;11156;11157;11158;11159 9142;9143;9144;9145;9146;9147 9147 6 551230 0 GASLKSPLPSQ LQEEQRKQENALKPKGASLKSPLPSQ____ LKPKGASLKSPLPSQ_______________ K G A S Q - 1 0 0 0 0 1 0 1 0 0 2 1 0 0 2 3 0 0 0 0 0 0 11 1 1083.5924 Q86TS9 Q86TS9 113 123 MRPL52 39S ribosomal protein L52, mitochondrial yes yes 2 0.032081 99.973 By MS/MS 10 0 1 1 884810 884810 0 4731 1813 4894 11160 9148 9148 1 47688 0 GASQAGMTGYGMPR QEGKNVIGLQMGTNRGASQAGMTGYGMPRQ RGASQAGMTGYGMPRQIL____________ R G A P R Q 2 1 0 0 0 1 0 4 0 0 0 0 2 0 1 1 1 0 1 0 0 0 14 0 1382.6071 P37802;Q9UI15 P37802 183 196 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 2 0.0038781 102.4 By MS/MS 9 0 1 1 162740 162740 0 4732 846 4895 11161 9149 9149 428;429 0 3202.8 0 GASVFQVK FWYLTSANIPSETLRGASVFQVKLGNQNVE IPSETLRGASVFQVKLGNQNVETKQLLSAS R G A V K L 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 8 0 834.45995 Q8WWC4 Q8WWC4 242 249 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.0011651 151.29 By MS/MS 9 0 1 1 2260500 2260500 0 4733 2034 4896 11162 9150 9150 1 44488 0 GATLTLQR TVRGWLQKVKYHRLKGATLTLQRYCRGHLA VKYHRLKGATLTLQRYCRGHLARRLAEHLR K G A Q R Y 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 8 0 858.49232 Q9ULV0 Q9ULV0 789 796 MYO5B Unconventional myosin-Vb yes yes 2 0.048838 106.42 By MS/MS 3 0.816 1 1 1 3 1272700 1272700 0 4734 2775 4897 11163;11164;11165 9151 9151 0 130670 0 GATPEGIFLR GLVRENYVWNVLLHRGATPEGIFLRVPTAS VLLHRGATPEGIFLRVPTASYDLDLFTMTW R G A L R V 1 1 0 0 0 0 1 2 0 1 1 0 0 1 1 0 1 0 0 0 0 0 10 0 1059.5713 Q92538 Q92538 907 916 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0041165 107.57 By MS/MS 2 0.816 1 1 1 3 2409500 2409500 0 4735 2050 4898 11166;11167;11168 9152;9153 9152 2 615030 0 GATQQILDEAER FSGVALGEACTIVLRGATQQILDEAERSLH VLRGATQQILDEAERSLHDALCVLAQTVKD R G A E R S 2 1 0 1 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 12 0 1329.6525 P78371 P78371 377 388 CCT2 T-complex protein 1 subunit beta yes yes 2 7.1263E-25 311.02 By MS/MS By MS/MS 7.43 1.5 3 1 1 1 1 6 1 113670000 113450000 218020 4736 1222 4899 11169;11170;11171;11172;11173;11174;11175 9154;9155;9156;9157;9158;9159;9160 9157 7 863100 223410 GATVDKTVCK WWTNTAHYNRERIRRGATVDKTVCKKNLGR ERIRRGATVDKTVCKKNLGRLTRLYLKAEQ R G A C K K 1 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 2 0 0 2 0 0 10 1 1077.5488 Q6P2Q9 Q6P2Q9 764 773 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0028974 131.62 By MS/MS 2 0 1 1 184190 184190 0 4737 1708 4900 11176 9161 9161 1 62302 0 GATVDKTVCKK WWTNTAHYNRERIRRGATVDKTVCKKNLGR RIRRGATVDKTVCKKNLGRLTRLYLKAEQE R G A K K N 1 0 0 1 1 0 0 1 0 0 0 3 0 0 0 0 2 0 0 2 0 0 11 2 1205.6438 Q6P2Q9 Q6P2Q9 764 774 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.012348 99.788 By MS/MS 2 0 1 1 0 0 0 4738 1708 4901 11177 9162 9162 1 0 0 GAVAIADAIR QVEVINFGDCLVRSKGAVAIADAIRGGLPK LVRSKGAVAIADAIRGGLPKLKELNLSFCE K G A I R G 4 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 10 0 955.54508 P46060 P46060 280 289 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0040636 107.69 By MS/MS 5.5 1.12 1 1 1 1 4 6376400 6376400 0 4739 908 4902 11178;11179;11180;11181 9163 9163 1 105510 0 GAVDAAVPTNIIAAK ______________________________ GAVDAAVPTNIIAAKAAEVRANKVNWQSYL R G A A K A 5 0 1 1 0 0 0 1 0 2 0 1 0 0 1 0 1 0 0 2 0 0 15 0 1409.7878 Q9UI12 Q9UI12 8 22 ATP6V1H V-type proton ATPase subunit H yes yes 2 0.0045098 104.87 By MS/MS 6 0 1 1 2065100 2065100 0 4740 2735 4903 11182 9164 9164 1 14196 0 GAVDGGLSIPHSTK LARTTTGNKVFGALKGAVDGGLSIPHSTKR KGAVDGGLSIPHSTKRFPGYDSESKEFNAE K G A T K R 1 0 0 1 0 0 0 3 1 1 1 1 0 0 1 2 1 0 0 1 0 0 14 0 1337.6939 P46777 P46777 165 178 RPL5 60S ribosomal protein L5 yes yes 2 0.0004479 147.26 By MS/MS 7.5 0.5 1 1 2 2318100 2318100 0 4741 915 4904 11183;11184 9165;9166 9165 1 34992 0 GAVEAELDPVEYTLR ______________________________ GAVEAELDPVEYTLRKRLPSRLPRRPNDIY R G A L R K 2 1 0 1 0 0 3 1 0 0 2 0 0 0 1 0 1 0 1 2 0 0 15 0 1660.8308 O75817 O75817 9 23 POP7 Ribonuclease P protein subunit p20 yes yes 2 1.0177E-05 232.56 By MS/MS 9.5 0.5 1 1 2 762370 762370 0 4742 347 4905 11185;11186 9167 9167 1 17521 0 GAVECCPNCR KNVICDKCEGRGGKKGAVECCPNCRGTGMQ RGGKKGAVECCPNCRGTGMQIRIHQIGPGM K G A C R G 1 1 1 0 3 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1221.4689 P31689 P31689 145 154 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.0045125 106.68 By MS/MS 6.5 0.5 1 1 2 4513700 4513700 0 4743 787 4906 11187;11188 9168;9169 9169 1 41878 0 GAVGALLVYDIAK AGQERYRAITSAYYRGAVGALLVYDIAKHL YRGAVGALLVYDIAKHLTYENVERWLKELR R G A A K H 3 0 0 1 0 0 0 2 0 1 2 1 0 0 0 0 0 0 1 2 0 0 13 0 1288.7391 P62491;Q15907 P62491 83 95 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.00014484 168.74 By MS/MS 8.5 0.5 1 1 2 268910 268910 0 4744 1161 4907 11189;11190 9170;9171;9172 9172 2 4621.2 0 GAVGASVTSSTHEK EQLSKNRIIVEADRKGAVGASVTSSTHEKK KGAVGASVTSSTHEKKSRTNMAVKQGRFYL K G A E K K 2 0 0 0 0 0 1 2 1 0 0 1 0 0 0 3 2 0 0 2 0 0 14 0 1329.6525 Q9NW08 Q9NW08 197 210 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.00037097 185.99 By MS/MS 3 0 1 1 384530 384530 0 4745 2607 4908 11191 9173 9173 1 7035.8 0 GAVGAYGSER QGIINPIEAKQRKGKGAVGAYGSERTTQSM QRKGKGAVGAYGSERTTQSMQDFPVVDSEE K G A E R T 2 1 0 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 1 1 0 0 10 0 965.45666 Q9UBB9 Q9UBB9 188 197 TFIP11 Tuftelin-interacting protein 11 yes yes 2 0.028421 82.75 By MS/MS 4 0 1 1 378660 378660 0 4746 2695 4909 11192 9174 9174 1 35635 0 GAVIATELKNNSYK HCNGVDWRQKLDSQRGAVIATELKNNSYKL RGAVIATELKNNSYKLARWTCCALLAGSEY R G A Y K L 2 0 2 0 0 0 1 1 0 1 1 2 0 0 0 1 1 0 1 1 0 0 14 1 1506.8042 O15371 O15371 418 431 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 4.3095E-23 275.48 By MS/MS By matching 7.29 1.67 1 2 1 1 1 1 6 1 55135000 55091000 44368 4747 185 4910 11193;11194;11195;11196;11197;11198;11199 9175;9176;9177;9178;9179 9178 5 564790 45464 GAVPLEMLEIALR NVKKSKQLLQKAVERGAVPLEMLEIALRNL ERGAVPLEMLEIALRNLNLQKKQLLSEEEK R G A L R N 2 1 0 0 0 0 2 1 0 1 3 0 1 0 1 0 0 0 0 1 0 0 13 0 1410.7905 P33981 P33981 173 185 TTK Dual specificity protein kinase TTK yes yes 2 0.00684 97.456 By MS/MS 4 0 1 1 107250 107250 0 4748 805 4911 11200 9180 9180 399 1 10093 0 GAVSAEQVIAGFNR NSGRAGKSSGSGAGKGAVSAEQVIAGFNRL KGAVSAEQVIAGFNRLRQEQRGLASKAAEL K G A N R L 3 1 1 0 0 1 1 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 14 0 1417.7314 Q9UHV9 Q9UHV9 19 32 PFDN2 Prefoldin subunit 2 yes yes 2 7.2394E-24 278.51 By MS/MS 9.5 0.5 1 1 2 4523400 4523400 0 4749 2732 4912 11201;11202 9181;9182 9181 2 116020 0 GAVTGHEECVDALLQHGAK NVDAKDKWGRTALHRGAVTGHEECVDALLQ GHEECVDALLQHGAKCLLRDSRGRTPIHLS R G A A K C 3 0 0 1 1 1 2 3 2 0 2 1 0 0 0 0 1 0 0 2 0 0 19 0 1990.9531 O15084 O15084 693 711 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 3 0.023549 130.02 By MS/MS 4.5 0.5 1 1 2 1492000 1492000 0 4750 158 4913 11203;11204 9183 9183 1 99832 0 GAVWGATLNKDATK QGDTGDWIGTFLGHKGAVWGATLNKDATKA KGAVWGATLNKDATKAATAAADFTAKVWDA K G A T K A 3 0 1 1 0 0 0 2 0 0 1 2 0 0 0 0 2 1 0 1 0 0 14 1 1430.7518 Q9Y3F4 Q9Y3F4 60 73 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.0033273 136.81 By MS/MS 7 0 1 1 1084400 1084400 0 4751 2877 4914 11205 9184 9184 1 17023 0 GAVYSFDPVGSYQR YYVYNIIGGLDEEGKGAVYSFDPVGSYQRD KGAVYSFDPVGSYQRDSFKAGGSASAMLQP K G A Q R D 1 1 0 1 0 1 0 2 0 0 0 0 0 1 1 2 0 0 2 2 0 0 14 0 1544.726 P20618 P20618 147 160 PSMB1 Proteasome subunit beta type-1 yes yes 2 6.2547E-11 227.81 By MS/MS 9 0.816 1 1 1 3 9037000 9037000 0 4752 672 4915 11206;11207;11208 9185;9186;9187 9185 3 164310 0 GAWSNVLR WRKIARDEGGKAFFKGAWSNVLRGMGGAFV GGKAFFKGAWSNVLRGMGGAFVLVLYDEIK K G A L R G 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 8 0 901.477 P05141;P12235;P12236 P05141 273 280 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0048311 126.28 By MS/MS 6.71 2.91 1 1 1 2 1 1 7 94504000 94504000 0 4753 487;589;588 4916 11209;11210;11211;11212;11213;11214;11215 9188;9189;9190;9191;9192;9193;9194 9194 7 2132500 0 GAYDIFLNAK FQKDILIACRLNQKKGAYDIFLNAKEQNIV LNQKKGAYDIFLNAKEQNIVFNAETYSNLI K G A A K E 2 0 1 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1110.571 P42704 P42704 1050 1059 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 8.2585E-08 194.29 By MS/MS By MS/MS 4.29 1.67 1 2 1 1 1 1 6 1 9092900 8961700 131160 4754 886 4917 11216;11217;11218;11219;11220;11221;11222 9195;9196;9197;9198;9199;9200;9201 9198 7 345320 16694 GAYQDRDKPAQIR PRSGATAGAAGGRGKGAYQDRDKPAQIRFS GKGAYQDRDKPAQIRFSNISAAKAVADAIR K G A I R F 2 2 0 2 0 2 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 13 2 1516.7746 P50991 P50991 22 34 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.02024 111.52 By MS/MS 6 0 2 2 24234000 24234000 0 4755 985 4918 11223;11224 9202;9203 9203 2 166590 0 GCALQCAILSPAFK KDISTTLNADEAVARGCALQCAILSPAFKV RGCALQCAILSPAFKVREFSVTDAVPFPIS R G C F K V 3 0 0 0 2 1 0 1 0 1 2 1 0 1 1 1 0 0 0 0 0 0 14 0 1534.7636 O95757;Q92598;P34932 Q92598 375 388 HSPA4L;HSPH1;HSPA4 Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa;Heat shock 70 kDa protein 4 no no 2 2.8625E-05 194.48 By MS/MS 4 0 1 1 1551200 1551200 0 4756 2059;810;424 4919 11225 9204 9204 1 145980 0 GCENLNIVQDK YTTPKKRKARRNSAKGCENLNIVQDKIMQQ NSAKGCENLNIVQDKIMQQETSVPTLKQGL K G C D K I 0 0 2 1 1 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1288.6082 Q7Z417 Q7Z417 233 243 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 2.1718E-05 162.26 By MS/MS 5 0 1 1 836060 836060 0 4757 1789 4920 11226 9205 9205 1 8385.2 0 GCEVVVSGK ACYGVLRFIMESGAKGCEVVVSGKLRGQRA MESGAKGCEVVVSGKLRGQRAKSMKFVDGL K G C G K L 0 0 0 0 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 9 0 933.45897 P23396 P23396 133 141 RPS3 40S ribosomal protein S3 yes yes 2 0.011061 107.69 By MS/MS By MS/MS 6.43 3.25 1 1 1 2 1 1 5 2 42240000 41988000 251200 4758 703 4921 11227;11228;11229;11230;11231;11232;11233 9206;9207;9208;9209;9210;9211 9211 6 713300 353030 GCGDLCR RLRTLWIWECGITAKGCGDLCRVLRAKESL WECGITAKGCGDLCRVLRAKESLKELSLAG K G C C R V 0 1 0 1 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 836.32691 P13489 P13489 272 278 RNH1 Ribonuclease inhibitor yes yes 2 0.036184 100.07 By MS/MS 7 0 1 1 1716100 1716100 0 4759 601 4922 11234 9212 9212 1 26940 0 GCGTVLLSGPR GKILTFDQLALDSPKGCGTVLLSGPRKGRE DSPKGCGTVLLSGPRKGREVYRHFGKAPGT K G C P R K 0 1 0 0 1 0 0 3 0 0 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1115.5757 Q07020 Q07020 133 143 RPL18 60S ribosomal protein L18 yes yes 2 0.0012543 116.52 By MS/MS By matching 9 0 2 1 1 3694800 3647800 46953 4760 1298 4923 11235;11236 9213 9213 1 71790 107070 GCHLLVATPGR YGGADIGQQIRDLERGCHLLVATPGRLVDM DLERGCHLLVATPGRLVDMMERGKIGLDFC R G C G R L 1 1 0 0 1 0 0 2 1 0 2 0 0 0 1 0 1 0 0 1 0 0 11 0 1179.6183 O00571;O15523 O00571 316 326 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.00023075 136.99 By MS/MS 5.33 0.471 2 1 3 22783000 22783000 0 4761 116 4924 11237;11238;11239 9214;9215 9214 2 221680 0 GCILTLVER ESENLHNADQPLRVRGCILTLVERMDEEFT QPLRVRGCILTLVERMDEEFTKIMQNTDPH R G C E R M 0 1 0 0 1 0 1 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1059.5747 Q99613;B5ME19 Q99613 442 450 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 5.3462E-07 190.52 By MS/MS 3.75 1.56 1 1 1 2 2 1 8 37979000 37979000 0 4762 2252 4925 11240;11241;11242;11243;11244;11245;11246;11247 9216;9217;9218;9219;9220;9221;9222 9220 7 2976700 0 GCITIIGGGDTATCCAK GTKALMDEVVKATSRGCITIIGGGDTATCC ITIIGGGDTATCCAKWNTEDKVSHVSTGGG R G C A K W 2 0 0 1 3 0 0 4 0 3 0 1 0 0 0 0 3 0 0 0 0 0 17 0 1753.7797 P00558 P00558 366 382 PGK1 Phosphoglycerate kinase 1 yes yes 2 6.8968E-07 208.51 By MS/MS 7 0 1 1 1462400 1462400 0 4763 447 4926 11248 9223 9223 1 22957 0 GCLELIK ARGDLNDCFIPCTPKGCLELIKETGVPIAG CFIPCTPKGCLELIKETGVPIAGRHAVVVG K G C I K E 0 0 0 0 1 0 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 831.45242 P11586 P11586 151 157 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.041861 95.793 By MS/MS 4 0 1 1 1096600 1096600 0 4764 582 4927 11249 9224 9224 1 103200 0 GCLELIKETGVPIAGR ARGDLNDCFIPCTPKGCLELIKETGVPIAG CLELIKETGVPIAGRHAVVVGRSKIVGAPM K G C G R H 1 1 0 0 1 0 2 3 0 2 2 1 0 0 1 0 1 0 0 1 0 0 16 1 1711.9291 P11586 P11586 151 166 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.00037689 190.35 By MS/MS 4 0 2 2 3970400 3970400 0 4765 582 4928 11250;11251 9225;9226 9226 2 373640 0 GCLLYGPPGTGK TNPELFQRVGIIPPKGCLLYGPPGTGKTLL PPKGCLLYGPPGTGKTLLARAVASQLDCNF K G C G K T 0 0 0 0 1 0 0 4 0 0 2 1 0 0 2 0 1 0 1 0 0 0 12 0 1218.6067 P62333 P62333 169 180 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.027006 81.525 By MS/MS 7.5 0.5 1 1 2 4550300 4550300 0 4766 1159 4929 11252;11253 9227 9227 1 69343 0 GCPIGTGGVLSSQIK VATAMPPGTARPGSRGCPIGTGGVLSSQIK GCPIGTGGVLSSQIKVAHRPVTQQGLTGMK R G C I K V 0 0 0 0 1 1 0 4 0 2 1 1 0 0 1 2 1 0 0 1 0 0 15 0 1472.7657 Q96LB3 Q96LB3 52 66 IFT74 Intraflagellar transport protein 74 homolog yes yes 2 0.00059385 131.12 By MS/MS 5 0 1 1 1606400 1606400 0 4767 2194 4930 11254 9228 9228 1 16111 0 GCSNKPTTVNK AFQYSTVLTKSSLNKGCSNKPTTVNKRSVN SLNKGCSNKPTTVNKRSVNVNAASGGVQNS K G C N K R 0 0 2 0 1 0 0 1 0 0 0 2 0 0 1 1 2 0 0 1 0 0 11 1 1204.587 Q8NHV4 Q8NHV4 313 323 NEDD1 Protein NEDD1 yes yes 2 0.00070502 154.01 By MS/MS 5 0 1 1 0 0 0 4768 1969 4931 11255 9229 9229 1 0 0 GCTALHYAVLADDYR EDDFNNRLNNRASFKGCTALHYAVLADDYR GCTALHYAVLADDYRTVKELLDGGANPLQR K G C Y R T 3 1 0 2 1 0 0 1 1 0 2 0 0 0 0 0 1 0 2 1 0 0 15 0 1723.7988 Q9H078 Q9H078 266 280 CLPB Caseinolytic peptidase B protein homolog yes yes 2 6.5822E-05 189.33 By MS/MS 6 0 1 1 3007800 3007800 0 4769 2402 4932 11256 9230;9231 9231 2 20677 0 GCTATLGNFAK LLMMAGIDDCYTSARGCTATLGNFAKATFD TSARGCTATLGNFAKATFDAISKTYSYLTP R G C A K A 2 0 1 0 1 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 0 0 11 0 1138.5441 P15880 P15880 228 238 RPS2 40S ribosomal protein S2 yes yes 2 9.4929E-07 191.45 By MS/MS 8.4 1.02 1 2 1 1 5 51539000 51539000 0 4770 627 4933 11257;11258;11259;11260;11261 9232;9233;9234;9235;9236 9233 4 717860 0 GCTDNLTLTVAR NTSNMTHLEAQNRIKGCTDNLTLTVARSEH RIKGCTDNLTLTVARSEHKVWSPLVTEEGK K G C A R S 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 0 3 0 0 1 0 0 12 0 1319.6503 O00151 O00151 72 83 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 5.7558E-06 185.33 By MS/MS 7 0 1 1 816930 816930 0 4771 84 4934 11262 9237 9237 1 12824 0 GDADMYDLPK SAASSYSFSDLNSTRGDADMYDLPKKEDAL LNSTRGDADMYDLPKKEDALLYQSKGYNDD R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 P50402 P50402 69 78 EMD Emerin yes yes 2 0.012539 108.43 By MS/MS 7 0 1 1 794900 794900 0 4772 973 4935 11263 9238 9238 0 12478 0 GDADMYDLPKKEDALLYQSK SAASSYSFSDLNSTRGDADMYDLPKKEDAL YDLPKKEDALLYQSKGYNDDYYEESYFTTR R G D S K G 2 0 0 4 0 1 1 1 0 0 3 3 1 0 1 1 0 0 2 0 0 0 20 2 2299.1042 P50402 P50402 69 88 EMD Emerin yes yes 3 0.0023101 91.926 By MS/MS 7.5 0.5 1 1 2 2015300 2015300 0 4773 973 4936 11264;11265 9239 9239 530 1 30408 0 GDAHECFVSPVAK DVDGVTDINLGKLVRGDAHECFVSPVAKAV VRGDAHECFVSPVAKAVIELLEKSGVNLDG R G D A K A 2 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 0 0 2 0 0 13 0 1415.6503 Q6UB35 Q6UB35 193 205 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00037513 144.55 By MS/MS 4 0 1 1 1924700 1924700 0 4774 1728 4937 11266 9240 9240 1 181130 0 GDAKEAGAEGPPAGAAAR ______________________________ KEAGAEGPPAGAAARGGLSLLSQGESEESS M G D A R G 7 1 0 1 0 0 2 4 0 0 0 1 0 0 2 0 0 0 0 0 0 0 18 1 1594.7699 Q3B7T1 Q3B7T1 2 19 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.00019127 142.39 By MS/MS 3 0 1 1 329130 329130 0 4775 1574 4938 11267 9241 9241 1 6022.1 0 GDATVSYEDPPTAK PMIHIYLDKETGKPKGDATVSYEDPPTAKA KGDATVSYEDPPTAKAAVEWFDGKDFQGSK K G D A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 0 2 1 2 0 1 1 0 0 14 0 1449.6624 Q01844 Q01844 411 424 EWSR1 RNA-binding protein EWS yes yes 2 5.3217E-05 186.74 By MS/MS 5 0 1 1 1107300 1107300 0 4776 1272 4939 11268 9242 9242 1 11106 0 GDDGRGGGTGGPNHPPAPR RGARSREFRSYREFRGDDGRGGGTGGPNHP RGGGTGGPNHPPAPRGRTASETRSEGSEYE R G D P R G 1 2 1 2 0 0 0 7 1 0 0 0 0 0 4 0 1 0 0 0 0 0 19 1 1770.8146 P48634 P48634 1062 1080 PRRC2A Protein PRRC2A yes yes 3 0.012541 74.147 By MS/MS 2 0 1 1 139350 139350 0 4777 938 4940 11269 9243 9243 1 47135 0 GDDLSTAILK ______________________________ GADSKGDDLSTAILKQKNRPNRLIVDEAIN K G D L K Q 1 0 0 2 0 0 0 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 1031.5499 P55072 P55072 9 18 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0016113 131.5 By MS/MS 6.5 2.5 1 1 2 327200 327200 0 4778 1054 4941 11270;11271 9244;9245 9245 1 6439.3 0 GDDSEWLKLPVDQK ______________________________ MGDDSEWLKLPVDQKCEHKLWKARLSGYEE M G D Q K C 0 0 0 3 0 1 1 1 0 0 2 2 0 0 1 1 0 1 0 1 0 0 14 1 1628.8046 Q14008 Q14008 2 15 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.7844E-11 238.92 By MS/MS 2 0 1 1 161990 161990 0 4779 1417 4942 11272 9246;9247 9246 2 54791 0 GDECELLGHSK GTVVTGTLERGILKKGDECELLGHSKNIRT ILKKGDECELLGHSKNIRTVVTGIEMFHKS K G D S K N 0 0 0 1 1 0 2 2 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1243.5503 P49411 P49411 287 297 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 2.0242E-05 163.64 By MS/MS 7.4 0.49 3 2 5 10454000 10454000 0 4780 949 4943 11273;11274;11275;11276;11277 9248;9249;9250 9248 3 162380 0 GDECGLALGR AKRIVVKLGSAVVTRGDECGLALGRLASIV AVVTRGDECGLALGRLASIVEQVSVLQNQG R G D G R L 1 1 0 1 1 0 1 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1046.4815 P54886 P54886 85 94 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.00036843 135.83 By MS/MS By matching 5.33 0.471 2 1 2 1 11304000 11109000 195040 4781 1048 4944 11278;11279;11280 9251 9251 1 108300 163790 GDETFAVLSR MYQWIEQDMEKYILRGDETFAVLSRLVAHG KYILRGDETFAVLSRLVAHGKQLFLITNSP R G D S R L 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1093.5404 Q9H857 Q9H857 247 256 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.011501 109.44 By MS/MS 6 0 1 1 1350400 1350400 0 4782 2472 4945 11281 9252 9252 0 9283.2 0 GDFCIQVGR LGETNPADSKPGTIRGDFCIQVGRNIIHGS KPGTIRGDFCIQVGRNIIHGSDSVKSAEKE R G D G R N 0 1 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1050.4917 P22392;O60361;P15531 P22392 106 114 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 2 0.0031858 112.41 By MS/MS 9.5 0.5 1 1 2 7415300 7415300 0 4783 692;625 4946 11282;11283 9253 9253 1 357030 0 GDFDENLNYPEQK YDYLKTLAGDVHIVRGDFDENLNYPEQKVV VRGDFDENLNYPEQKVVTVGQFKIGLIHGH R G D Q K V 0 0 2 2 0 1 2 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 13 0 1567.6791 Q9UBQ0 Q9UBQ0 61 73 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 2 1.2325E-11 237.84 By MS/MS 9 0 1 1 1521900 1521900 0 4784 2702 4947 11284 9254 9254 1 29951 0 GDFITIGSR EDFLNICIEPDTISKGDFITIGSRKVRNPK PDTISKGDFITIGSRKVRNPKLHVEGTECL K G D S R K 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 Q53H12 Q53H12 343 351 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.00067018 141.48 By MS/MS By matching 7 0 2 1 1 4428700 4396700 32037 4785 1589 4948 11285;11286 9255 9255 1 69020 57698 GDFLALDLGGTNFR MLPTYVCATPDGTEKGDFLALDLGGTNFRV KGDFLALDLGGTNFRVLLVRVRNGKWGGVE K G D F R V 1 1 1 2 0 0 0 3 0 0 3 0 0 2 0 0 1 0 0 0 0 0 14 0 1494.7467 P52789;P52790 P52789 526 539 HK2;HK3 Hexokinase-2;Hexokinase-3 yes no 2 1.4874E-05 198.81 By MS/MS 4 0 1 1 112900 112900 0 4786 1023 4949 11287 9256 9256 1 10624 0 GDGPICLVLAPTR LPAIVHINHQPFLERGDGPICLVLAPTREL ERGDGPICLVLAPTRELAQQVQQVAAEYCR R G D T R E 1 1 0 1 1 0 0 2 0 1 2 0 0 0 2 0 1 0 0 1 0 0 13 0 1367.7231 P17844;Q92841 P17844 165 177 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.00010869 172.61 By MS/MS 5 0 1 1 4116300 4116300 0 4787 646;2073 4950 11288 9257 9257 1 41285 0 GDHAWSFLK ______________________________ ______________________________ M G D L K D 1 0 0 1 0 0 0 1 1 0 1 1 0 1 0 1 0 1 0 0 0 0 9 0 1059.5138 P12235 P12235 2 10 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0035813 112.41 By MS/MS 8 0 1 1 197160 197160 0 4788 588 4951 11289 9258 9258 1 2489.2 0 GDHWTTR NKLKGQKIVSCRICKGDHWTTRCPYKDTLG IVSCRICKGDHWTTRCPYKDTLGPMQKELA K G D T R C 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 7 0 871.39366 O75821 O75821 162 168 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.026183 107.59 By MS/MS 7.5 0.5 1 1 2 3576900 3576900 0 4789 348 4952 11290;11291 9259 9259 1 55200 0 GDIDHVK GPDTYLALLNAYAEKGDIDHVKQTLEKVEK LLNAYAEKGDIDHVKQTLEKVEKSELHLMD K G D V K Q 0 0 0 2 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 782.39227 P42704 P42704 281 287 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.032587 102.77 By MS/MS 3 0 1 1 549380 549380 0 4790 886 4953 11292 9260 9260 1 10052 0 GDIDHVKQTLEK GPDTYLALLNAYAEKGDIDHVKQTLEKVEK AEKGDIDHVKQTLEKVEKSELHLMDRDLLQ K G D E K V 0 0 0 2 0 1 1 1 1 1 1 2 0 0 0 0 1 0 0 1 0 0 12 1 1381.7201 P42704 P42704 281 292 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.030347 93.839 By MS/MS 3 0 1 1 453960 453960 0 4791 886 4954 11293 9261 9261 1 8306.2 0 GDIFLVR YLKPYFLEAYRPIRKGDIFLVRGGMRAVEF EAYRPIRKGDIFLVRGGMRAVEFKVVETDP K G D V R G 0 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 818.46504 P55072 P55072 149 155 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0080711 143.02 By MS/MS 6 2.16 1 1 1 3 4943300 4943300 0 4792 1054 4955 11294;11295;11296 9262;9263;9264 9262 3 391810 0 GDIIGVQGNPGK KSEEEFIHINNKLRRGDIIGVQGNPGKTKK LRRGDIIGVQGNPGKTKKGELSIIPYEITL R G D G K T 0 0 1 1 0 1 0 4 0 2 0 1 0 0 1 0 0 0 0 1 0 0 12 0 1153.6091 Q15046 Q15046 179 190 KARS Lysine--tRNA ligase yes yes 2 0.0023629 111.27 By MS/MS 5 0 1 1 935850 935850 0 4793 1481 4956 11297 9265 9265 1 9386.1 0 GDIIQLQR EELMLGDPCLKDLKKGDIIQLQRRGFFICD CLKDLKKGDIIQLQRRGFFICDQPYEPVSP K G D Q R R 0 1 0 1 0 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 8 0 941.52943 P07814 P07814 667 674 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0049312 125.81 By MS/MS 3.5 0.5 1 1 2 2475900 2475900 0 4794 512 4957 11298;11299 9266 9266 1 87551 0 GDINILLIGDPSVAK LGGVERDLENGSHIRGDINILLIGDPSVAK GDINILLIGDPSVAKSQLLRYVLCTAPRAI R G D A K S 1 0 1 2 0 0 0 2 0 3 2 1 0 0 1 1 0 0 0 1 0 0 15 0 1523.8559 P25205 P25205 337 351 MCM3 DNA replication licensing factor MCM3 yes yes 2 4.9333E-07 208.82 By MS/MS 5 0.816 1 1 1 3 1214000 1214000 0 4795 719 4958 11300;11301;11302 9267 9267 1 78317 0 GDINVCIVGDPSTAK FGGVPKTTGEGTSLRGDINVCIVGDPSTAK GDINVCIVGDPSTAKSQFLKHVEEFSPRAV R G D A K S 1 0 1 2 1 0 0 2 0 2 0 1 0 0 1 1 1 0 0 2 0 0 15 0 1544.7505 Q14566 Q14566 388 402 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.00084531 126.32 By MS/MS 4 0 1 1 1079600 1079600 0 4796 1444 4959 11303 9268 9268 1 101600 0 GDIVDIK HGVVPLATYMRIYKKGDIVDIKGMGTVQKG TYMRIYKKGDIVDIKGMGTVQKGMPHKCYH K G D I K G 0 0 0 2 0 0 0 1 0 2 0 1 0 0 0 0 0 0 0 1 0 0 7 0 758.41742 P46778 P46778 37 43 RPL21 60S ribosomal protein L21 yes yes 2 0.048248 90.986 By MS/MS 9 0 1 1 625440 625440 0 4797 916 4960 11304 9269 9269 1 12309 0 GDKAQIEKR EVIVTKDDAMLLKGKGDKAQIEKRIQEIIE MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY K G D K R I 1 1 0 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1043.5724 P10809 P10809 362 370 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.052764 77.533 By MS/MS 6 0 1 1 1640800 1640800 0 4798 569 4961 11305 9270 9270 1 11279 0 GDKPVTYEEAHAPHYIAHR PVCAKNRAARVRVSKGDKPVTYEEAHAPHY VTYEEAHAPHYIAHRKGWLSLHTGNLDGED K G D H R K 3 1 0 1 0 0 2 1 3 1 0 1 0 0 2 0 1 0 2 1 0 0 19 1 2190.0606 Q96EL2 Q96EL2 47 65 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 4 0.0061833 76.526 By MS/MS 10 0 1 1 264930 264930 0 4799 2145 4962 11306 9271 9271 1 14279 0 GDLCAISLVGNR PGLVMPPAGLPQVQKGDLCAISLVGNRAPV VQKGDLCAISLVGNRAPVAIGVAAMSTAEM K G D N R A 1 1 1 1 1 0 0 2 0 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1273.6449 P41214 P41214 130 141 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.0015782 114.4 By MS/MS 5 0 1 1 1083600 1083600 0 4800 867 4963 11307 9272 9272 1 10868 0 GDLGIEIPAEK FDEILEASDGIMVARGDLGIEIPAEKVFLA MVARGDLGIEIPAEKVFLAQKMMIGRCNRA R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 P14618;P30613 P14618 295 305 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.043703 85.355 By matching By MS/MS 3 0 2 1 1 256990 69875 187120 4801 614 4964 11308;11309 9273 9273 0 1278.5 23817 GDLGIEIPAEKVFLAQK FDEILEASDGIMVARGDLGIEIPAEKVFLA LGIEIPAEKVFLAQKMMIGRCNRAGKPVIC R G D Q K M 2 0 0 1 0 1 2 2 0 2 2 2 0 1 1 0 0 0 0 1 0 0 17 1 1827.0142 P14618;P30613 P14618 295 311 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2;3 0.0025718 140.33 By MS/MS 6 0 2 2 4798100 4798100 0 4802 614 4965 11310;11311 9274;9275;9276 9276 3 32983 0 GDLLEGANAYHCEK RNHQNLLDSLEQYVKGDLLEGANAYHCEKC KGDLLEGANAYHCEKCNKKVDTVKRLLIKK K G D E K C 2 0 1 1 1 0 2 2 1 0 2 1 0 0 0 0 0 0 1 0 0 0 14 0 1575.6988 Q93008;O00507 Q93008 1760 1773 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2;3 1.3062E-05 184.87 By MS/MS 1.67 0.471 1 2 3 2747200 2747200 0 4803 2085 4966 11312;11313;11314 9277;9278 9277 2 915620 0 GDLLFLTNR IVVVLSGSMEPAFHRGDLLFLTNRVEDPIR EPAFHRGDLLFLTNRVEDPIRVGEIVVFRI R G D N R V 0 1 1 1 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 9 0 1047.5713 P67812 P67812 64 72 SEC11A Signal peptidase complex catalytic subunit SEC11A yes yes 2 0.00078147 138.06 By MS/MS 9.5 0.5 1 1 2 1555800 1555800 0 4804 1207 4967 11315;11316 9279;9280 9279 2 33246 0 GDLNDCFIPCTPK DVDGLTSINAGRLARGDLNDCFIPCTPKGC ARGDLNDCFIPCTPKGCLELIKETGVPIAG R G D P K G 0 0 1 2 2 0 0 1 0 1 1 1 0 1 2 0 1 0 0 0 0 0 13 0 1535.6748 P11586 P11586 138 150 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0015214 116.71 By MS/MS 4.5 1.12 1 1 1 1 4 9603400 9603400 0 4805 582 4968 11317;11318;11319;11320 9281 9281 1 843590 0 GDLPFVVPR AMNREVSSLKNKLRRGDLPFVVPRRMARKG KNKLRRGDLPFVVPRRMARKGAGDGSDEEV R G D P R R 0 1 0 1 0 0 0 1 0 0 1 0 0 1 2 0 0 0 0 2 0 0 9 0 998.55492 P35579 P35579 1924 1932 MYH9 Myosin-9 yes yes 2 0.01456 92.439 By MS/MS 2 0 1 1 523160 523160 0 4806 824 4969 11321 9282 9282 1 176950 0 GDLPREPLVATNLPGR GSTELQAAKKVHTSKGDLPREPLVATNLPG DLPREPLVATNLPGRGQLQKLASERNLFIS K G D G R G 1 2 1 1 0 0 1 2 0 0 3 0 0 0 3 0 1 0 0 1 0 0 16 1 1703.9319 P42166 P42166 249 264 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.04774 61.186 By MS/MS 5 0 1 1 1355600 1355600 0 4807 875 4970 11322 9283 9283 1 13596 0 GDLVSVK LELILTQSVENVGVRGDLVSVKKSLGRNRL SVENVGVRGDLVSVKKSLGRNRLLPQGLAV R G D V K K 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 7 0 716.40685 Q9BYD2 Q9BYD2 109 115 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.052752 89.369 By MS/MS 8 0 1 1 542010 542010 0 4808 2369 4971 11323 9284 9284 1 6842.8 0 GDNITLLQSVSN SKTKSRKQLGRIMLKGDNITLLQSVSN___ MLKGDNITLLQSVSN_______________ K G D S N - 0 0 2 1 0 1 0 1 0 1 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1259.6357 P62304 P62304 81 92 SNRPE Small nuclear ribonucleoprotein E yes yes 2 0.0011159 123.01 By MS/MS 10 0 1 1 504350 504350 0 4809 1153 4972 11324 9285 9285 1 27183 0 GDNNAVDDR KIHEKQNGHIKFLTKGDNNAVDDRGLYKQG IKFLTKGDNNAVDDRGLYKQGQHWLEKKDV K G D D R G 1 1 2 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 974.40535 P67812;P0C7V7 P67812 115 123 SEC11A;SEC11B Signal peptidase complex catalytic subunit SEC11A;Putative signal peptidase complex catalytic subunit SEC11B yes no 2 0.0025078 114.86 By MS/MS 9.5 0.5 1 1 2 1396500 1396500 0 4810 1207 4973 11325;11326 9286 9286 1 29324 0 GDNQAGGAAAAAAAPEPPPR GSNPGAHNPSANLARGDNQAGGAAAAAAAP GGAAAAAAAPEPPPRSRRVPRPPEREDSDN R G D P R S 8 1 1 1 0 1 1 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 20 0 1787.8551 O14654 O14654 1199 1218 IRS4 Insulin receptor substrate 4 yes yes 2 2.0782E-05 215.93 By MS/MS 2.5 0.5 1 1 2 938870 938870 0 4811 129 4974 11327;11328 9287 9287 1 51949 0 GDNRLDLLK NGSEQGGVLLLENPKGDNRLDLLKLKSVVT LLENPKGDNRLDLLKLKSVVTSIFGVKNTE K G D L K L 0 1 1 2 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 1 1042.5771 P41252 P41252 1105 1113 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.0017116 143.04 By MS/MS 3 0 1 1 556100 556100 0 4812 871 4975 11329 9288 9288 1 10175 0 GDPQVYEELFSYSCPK QLREKYGDKMLRMQKGDPQVYEELFSYSCP DPQVYEELFSYSCPKFLSPVVPNYDNVHPN K G D P K F 0 0 0 1 1 1 2 1 0 0 1 1 0 1 2 2 0 0 2 1 0 0 16 0 1917.8455 Q9Y262 Q9Y262 404 419 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 6.5344E-05 219.97 By MS/MS 5.86 1.25 1 2 2 1 1 7 16079000 16079000 0 4813 2814 4976 11330;11331;11332;11333;11334;11335;11336 9289;9290;9291;9292;9293;9294;9295 9289 7 142740 0 GDPSKQDILTIFK ______________________________ ______________________________ M G D F K R 0 0 0 2 0 1 0 1 0 2 1 2 0 1 1 1 1 0 0 0 0 0 13 1 1460.7875 Q9NP61 Q9NP61 2 14 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 2 0.0003024 151.13 By MS/MS 5 0 1 1 170450 170450 0 4814 2523 4977 11337 9296 9296 1 1709.6 0 GDPYPQEVSATVQK ILFSAHSLPMSVVNRGDPYPQEVSATVQKV RGDPYPQEVSATVQKVMERLEYCNPYRLVW R G D Q K V 1 0 0 1 0 2 1 1 0 0 0 1 0 0 2 1 1 0 1 2 0 0 14 0 1517.7362 P22830 P22830 273 286 FECH Ferrochelatase, mitochondrial yes yes 2 0.00047359 156 By MS/MS 7 0 1 1 1537300 1537300 0 4815 698 4978 11338 9297 9297 1 24133 0 GDQENVHPDVMLVQPR ESCLEAYTGIVQGLKGDQENVHPDVMLVQP DQENVHPDVMLVQPRVEFILSFIDHIAGDE K G D P R V 0 1 1 2 0 2 1 1 1 0 1 0 1 0 2 0 0 0 0 3 0 0 16 0 1832.8839 Q14974 Q14974 778 793 KPNB1 Importin subunit beta-1 yes yes 3 0.0047265 100.11 By MS/MS 4 0 1 1 1057100 1057100 0 4816 1462 4979 11339 9298 9298 1 99485 0 GDQPAASGDSDDDEPPPLPR LLLGLCIFLLYKIVRGDQPAASGDSDDDEP ASGDSDDDEPPPLPRLKRRDFTPAELRRFD R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 8.5529E-19 262.73 By MS/MS 8.5 0.5 1 1 2 3045500 3045500 0 4817 96 4980 11340;11341 9299;9300 9299 2 50408 0 GDREQLLQR ______________________________ ______________________________ M G D Q R A 0 2 0 1 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 1 1113.5891 Q04917 Q04917 2 10 YWHAH 14-3-3 protein eta yes yes 2 0.0047348 109.44 By MS/MS By MS/MS 8 0 2 1 1 11181000 10996000 184840 4818 1294 4981 11342;11343 9301;9302 9302 2 138820 249430 GDSVIVVLR KPVNKDRYISKMFLRGDSVIVVLRNPLIAG SKMFLRGDSVIVVLRNPLIAGK________ R G D L R N 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 3 0 0 9 0 956.56548 P62316 P62316 103 111 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.00059182 143.89 By MS/MS 10 0 1 1 1337000 1337000 0 4819 1156 4982 11344 9303 9303 1 72059 0 GDTGVFLQYTHAR LSDYKFSWDRVFQSRGDTGVFLQYTHARLH SRGDTGVFLQYTHARLHSLEETFGCGYLND R G D A R L 1 1 0 1 0 1 0 2 1 0 1 0 0 1 0 0 2 0 1 1 0 0 13 0 1463.7157 Q5T160 Q5T160 457 469 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.00024017 145.09 By MS/MS 6 0 1 1 2391100 2391100 0 4820 1627 4983 11345 9304;9305 9304 2 16437 0 GDTPGHATPGHGGATSSAR PTPSHTPAGAATPGRGDTPGHATPGHGGAT GHATPGHGGATSSARKNRWDETPKTERDTP R G D A R K 3 1 0 1 0 0 0 5 2 0 0 0 0 0 2 2 3 0 0 0 0 0 19 0 1732.7877 O75533 O75533 271 289 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0042268 89.344 By MS/MS 3.5 0.5 1 1 2 774730 774730 0 4821 332 4984 11346;11347 9306 9306 1 23571 0 GDTVSASPCSAPLAR DEDENEAVGQPGGPRGDTVSASPCSAPLAR GDTVSASPCSAPLARASSLEDLVLKEASTA R G D A R A 3 1 0 1 1 0 0 1 0 0 1 0 0 0 2 3 1 0 0 1 0 0 15 0 1487.7038 Q15477 Q15477 239 253 SKIV2L Helicase SKI2W yes yes 2 6.0191E-07 205.07 By MS/MS 3 0 1 1 499650 499650 0 4822 1516 4985 11348 9307 9307 1 9142.2 0 GDVEEDETIPDSEQDIRPR VNGMKYSDIDIILLKGDVEEDETIPDSEQD EDETIPDSEQDIRPRFHRSRTVAQQHDEDG K G D P R F 0 2 0 4 0 1 4 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 19 1 2198.9927 Q92973 Q92973 328 346 TNPO1 Transportin-1 yes yes 3 0.0001576 119.65 By MS/MS 4.5 0.5 1 1 2 3586500 3586500 0 4823 2082 4986 11349;11350 9308 9308 1 306160 0 GDVENIEVVQK SRLAVTRVIQALAMKGDVENIEVVQKMLNG LAMKGDVENIEVVQKMLNGLEDSIGLSKMV K G D Q K M 0 0 1 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 0 3 0 0 11 0 1228.6299 P42704 P42704 1153 1163 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 5.9733E-10 223.31 By MS/MS 2.5 1.12 1 1 1 1 4 13307000 13307000 0 4824 886 4987 11351;11352;11353;11354 9309;9310 9309 2 407490 0 GDVGSADIQDLEK PLKVEFLECSAKGGRGDVGSADIQDLEKWL GRGDVGSADIQDLEKWLAKIA_________ R G D E K W 1 0 0 3 0 1 1 2 0 1 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1345.6361 Q9Y5M8 Q9Y5M8 253 265 SRPRB Signal recognition particle receptor subunit beta yes yes 2 2.0706E-06 202 By MS/MS By matching 8.75 0.829 2 1 1 3 1 11099000 10979000 119270 4825 2917 4988 11355;11356;11357;11358 9311 9311 1 149160 160940 GDVTAQIALQPALK NLNVTEEKYQEALAKGDVTAQIALQPALKF KGDVTAQIALQPALKFNGGGHINHSIFWTN K G D L K F 3 0 0 1 0 2 0 1 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1423.8035 P04179 P04179 76 89 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 2 0.00077966 155.33 By MS/MS 9 0 1 1 271540 271540 0 4826 469 4989 11359 9312 9312 1 5344 0 GDVTITNDGATILK SLGPKGMDKMIQDGKGDVTITNDGATILKQ KGDVTITNDGATILKQMQVLHPAARMLVEL K G D L K Q 1 0 1 2 0 0 0 2 0 2 1 1 0 0 0 0 3 0 0 1 0 0 14 0 1416.746 P50991 P50991 66 79 CCT4 T-complex protein 1 subunit delta yes yes 2 6.263E-09 208.17 By MS/MS By MS/MS 7.8 1.6 2 1 1 1 4 1 29841000 29776000 64629 4827 985 4990 11360;11361;11362;11363;11364 9313;9314;9315;9316;9317 9313 4 237920 66227 GDVVPKDVNAAIATIK DPRHGKYMACCLLYRGDVVPKDVNAAIATI DVVPKDVNAAIATIKTKRTIQFVDWCPTGF R G D I K T 3 0 1 2 0 0 0 1 0 2 0 2 0 0 1 0 1 0 0 3 0 0 16 1 1609.9039 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 321 336 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2;3 0.0030267 101.42 By MS/MS 7.5 1.12 2 2 2 2 8 38767000 38767000 0 4828 1210;1751;2290 4991 11365;11366;11367;11368;11369;11370;11371;11372 9318;9319 9319 0 283490 0 GEAAPGQGQAAVK AESRYLRTWLEPAPRGEAAPGQGQAAVKAE PRGEAAPGQGQAAVKAEPLLGAPGELLKQG R G E V K A 4 0 0 0 0 2 1 3 0 0 0 1 0 0 1 0 0 0 0 1 0 0 13 0 1182.5993 P17482 P17482 105 117 HOXB9 Homeobox protein Hox-B9 yes yes 2 0.0026668 110.54 By MS/MS 8 0 1 1 276370 276370 0 4829 642 4992 11373 9320 9320 1 3489.1 0 GEADILAALK TLRRDRDKIQGFQAKGEADILAALKKLQDQ GFQAKGEADILAALKKLQDQRQYIVAEFEQ K G E L K K 3 0 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 999.56006 Q12899 Q12899 170 179 TRIM26 Tripartite motif-containing protein 26 yes yes 2 0.00088624 125.82 By MS/MS 5 0 1 1 421130 421130 0 4830 1336 4993 11374 9321 9321 1 4223.7 0 GEADRDTYRR RPKGLEGERPARLTRGEADRDTYRRSAVPP ARLTRGEADRDTYRRSAVPPGADKKAEAGA R G E R R S 1 3 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 10 2 1237.58 P46783 P46783 120 129 RPS10 40S ribosomal protein S10 yes yes 3 0.048729 68.893 By MS/MS 9 0.816 1 1 1 3 116280000 116280000 0 4831 920 4994 11375;11376;11377 9322 9322 1 2267000 0 GEALSALDSK VQRIMVANIEEVLQRGEALSALDSKANNLS EVLQRGEALSALDSKANNLSSLSKKYRQDA R G E S K A 2 0 0 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 989.50294 O75396 O75396 160 169 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0002246 145.46 By MS/MS 8.5 0.5 1 1 2 4700000 4700000 0 4832 323 4995 11378;11379 9323;9324 9324 2 79897 0 GEAPGAETPSLR PSQPSAAMAATDSMRGEAPGAETPSLRHRG SMRGEAPGAETPSLRHRGQAAQPEPSTGFT R G E L R H 2 1 0 0 0 0 2 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 0 1183.5833 Q9BVT8 Q9BVT8 64 75 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 yes yes 2 0.0090626 91.701 By MS/MS 8 0 1 1 643270 643270 0 4833 2340 4996 11380 9325 9325 1 8121.2 0 GEATVSFDDPPSAK PMINLYTDRETGKLKGEATVSFDDPPSAKA KGEATVSFDDPPSAKAAIDWFDGKEFSGNP K G E A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 1 2 2 1 0 0 1 0 0 14 0 1419.6518 P35637;Q92804 P35637 335 348 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.00047948 168.85 By MS/MS 5 0 1 1 1466500 1466500 0 4834 829 4997 11381 9326 9326 1 14708 0 GEAVQEELLK ELGIEICLMYIEIEKGEAVQEELLKGLDNK IEIEKGEAVQEELLKGLDNKNPKIIVACIE K G E L K G 1 0 0 0 0 1 3 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1114.587 Q14008 Q14008 122 131 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00031403 139.38 By MS/MS 2 0 1 1 502980 502980 0 4835 1417 4998 11382 9327 9327 1 170130 0 GEDIGEDLFSEALGR VVRFICRLDQTLSVRGEDIGEDLFSEALGR GEDIGEDLFSEALGRAVGQWAGAKLLDHGC R G E G R A 1 1 0 2 0 0 3 3 0 1 2 0 0 1 0 1 0 0 0 0 0 0 15 0 1606.7475 Q8N2G8 Q8N2G8 394 408 GHDC GH3 domain-containing protein yes yes 2 0.0011123 99.732 By MS/MS 6 0 1 1 2816600 2816600 0 4836 1908 4999 11383 9328 9328 0 19362 0 GEDNIDFMPTILSR LAAANSVFGRWDETKGEDNIDFMPTILSRF KGEDNIDFMPTILSRFDMIFIVKDEHNEER K G E S R F 0 1 1 2 0 0 1 1 0 2 1 0 1 1 1 1 1 0 0 0 0 0 14 0 1606.7661 P33992 P33992 500 513 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00066476 129.71 By MS/MS 4 0 1 1 64920 64920 0 4837 807 5000 11384 9329 9329 1 6109.4 0 GEDQSELVTTVDK TWILSSNKDVGIWLKGEDQSELVTTVDKVV LKGEDQSELVTTVDKVVCLESAHPRMGVGC K G E D K V 0 0 0 2 0 1 2 1 0 0 1 1 0 0 0 1 2 0 0 2 0 0 13 0 1419.6729 Q8NC56 Q8NC56 340 352 LEMD2 LEM domain-containing protein 2 yes yes 2 2.975E-05 182.25 By MS/MS 6 0 1 1 1688100 1688100 0 4838 1948 5001 11385 9330 9330 1 11604 0 GEEAETQLQAALLK ECQELGAQAAPARRRGEEAETQLQAALLKN RGEEAETQLQAALLKNAWLAEENGRLQAKT R G E L K N 3 0 0 0 0 2 3 1 0 0 3 1 0 0 0 0 1 0 0 0 0 0 14 0 1499.7831 Q9UFD9;A6NNM3;A6NJZ7 Q9UFD9 598 611 RIMBP3;RIMBP3B;RIMBP3C RIMS-binding protein 3A;RIMS-binding protein 3B;RIMS-binding protein 3C yes no 2 0.0089501 105.98 By MS/MS 6.5 0.5 1 1 2 6390000 6390000 0 4839 25 5002 11386;11387 9331 9331 1 45485 0 GEEDADGSKTQDLFR AWKPSSKRTAADKDRGEEDADGSKTQDLFR GEEDADGSKTQDLFRRVRSILNKLTPQMFQ R G E F R R 1 1 0 3 0 1 2 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 15 1 1666.7435 Q04637 Q04637 748 762 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0005387 164.53 By MS/MS 2.25 0.433 3 1 4 4452500 4452500 0 4840 1291 5003 11388;11389;11390;11391 9332;9333;9334 9333 3 1432800 0 GEEILSGAQR PRNPKQSNSYDMFMRGEEILSGAQRIHDPQ DMFMRGEEILSGAQRIHDPQLLTERALHHG R G E Q R I 1 1 0 0 0 1 2 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1058.5356 P14868 P14868 422 431 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0010975 121.73 By MS/MS By matching 5 2.1 1 1 2 1 3 2 4827400 4573700 253750 4841 620 5004 11392;11393;11394;11395;11396 9335;9336 9336 2 34260 223070 GEELLSPLNLEQAAYAR STLREALTHRKIIAKGEELLSPLNLEQAAY ELLSPLNLEQAAYARDALAKAVYSRTFTWL K G E A R D 3 1 1 0 0 1 3 1 0 0 4 0 0 0 1 1 0 0 1 0 0 0 17 0 1872.9581 O00159 O00159 362 378 MYO1C Unconventional myosin-Ic yes yes 2 4.9789E-09 225.72 By MS/MS 4 0 1 1 999790 999790 0 4842 85 5005 11397 9337 9337 1 94087 0 GEENLMDAQVK TVLIKTAEELMNFSKGEENLMDAQVKAIAD NFSKGEENLMDAQVKAIADTGANVVVTGGK K G E V K A 1 0 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1232.5707 P50990 P50990 271 281 CCT8 T-complex protein 1 subunit theta yes yes 2 3.5189E-08 202.96 By MS/MS 6 0 1 1 451020 451020 0 4843 984 5006 11398 9338 9338 534 1 3100.4 0 GEETPVIVGSALCALEGR VELEIRELLTEFGYKGEETPVIVGSALCAL TPVIVGSALCALEGRDPELGLKSVQKLLDA K G E G R D 2 1 0 0 1 0 3 3 0 1 2 0 0 0 1 1 1 0 0 2 0 0 18 0 1856.9302 P49411 P49411 210 227 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.00030527 152.16 By MS/MS 7 0 1 1 53549 53549 0 4844 949 5007 11399 9339 9339 1 840.63 0 GEEVGELSR LDLLEILRQEKGGSRGEEVGELSRGKLYSL EKGGSRGEEVGELSRGKLYSLGNGRWMLTL R G E S R G 0 1 0 0 0 0 3 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 974.46689 P09543 P09543 361 369 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.0139 93.598 By MS/MS 7 0 1 1 507210 507210 0 4845 537 5008 11400 9340 9340 1 7962.4 0 GEFCSQGVR FTAKEVSFSNKPYFRGEFCSQGVREGLIVG NKPYFRGEFCSQGVREGLIVGFVHSMCQTA R G E V R E 0 1 0 0 1 1 1 2 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1038.4553 Q9UID3 Q9UID3 482 490 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.027094 85.862 By MS/MS 4.5 0.5 1 1 2 784180 784180 0 4846 2741 5009 11401;11402 9341 9341 1 57507 0 GEGAGPPPPLPPAQPGAEGGGDR ______________________________ PLPPAQPGAEGGGDRGLGDRPAPKDKWSNF K G E D R G 3 1 0 1 0 1 2 7 0 0 1 0 0 0 7 0 0 0 0 0 0 0 23 0 2079.9974 Q9NVI7;Q5T9A4 Q5T9A4 13 35 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 1.0313E-07 182.91 By MS/MS 5 0 1 1 4259500 4259500 0 4847 2598;1638 5010 11403 9342;9343 9343 2 42721 0 GEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPK ______________________________ EGGGDRGLGDRPAPKDKWSNFDPTGLERAA K G E P K D 4 2 0 2 0 1 2 9 0 0 2 1 0 0 9 0 0 0 0 0 0 0 32 2 2971.49 Q9NVI7;Q5T9A4 Q5T9A4 13 44 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 4 0.025851 41.247 By MS/MS 5 0 1 1 843090 843090 0 4848 2598;1638 5011 11404 9344 9344 1 8455.8 0 GEGAIGSLDYTPEER IRTALLAIIGFMPTKGEGAIGSLDYTPEER GEGAIGSLDYTPEERRALAKKSQDFCCEGC K G E E R R 1 1 0 1 0 0 3 3 0 1 1 0 0 0 1 1 1 0 1 0 0 0 15 0 1592.7318 Q9Y385 Q9Y385 123 137 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 2 9.0747E-05 214.26 By MS/MS 7 0 1 1 1259500 1259500 0 4849 2858 5012 11405 9345 9345 1 19772 0 GEGGEFSVDR RPPRERRFEKPLEEKGEGGEFSVDRPIIDR PLEEKGEGGEFSVDRPIIDRPIRGRGGLGR K G E D R P 0 1 0 1 0 0 2 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 10 0 1051.4571 Q8NC51 Q8NC51 146 155 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00098727 123.86 By MS/MS 5.5 0.5 1 1 2 2689000 2689000 0 4850 1946 5013 11406;11407 9346 9346 1 19771 0 GEGGILINSQGER TGIYGAGCLITEGCRGEGGILINSQGERFM CRGEGGILINSQGERFMERYAPVAKDLASR R G E E R F 0 1 1 0 0 1 2 4 0 2 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1328.6684 P31040 P31040 313 325 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 9.3641E-05 174.23 By MS/MS 5 0 1 1 3920700 3920700 0 4851 783 5014 11408 9347 9347 1 39323 0 GEGLPNFDNNNIK SRDKITRPGAKLWKKGEGLPNFDNNNIKGS KKGEGLPNFDNNNIKGSLIITFDVDFPKEQ K G E I K G 0 0 4 1 0 0 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 0 13 0 1430.679 Q9UBS4 Q9UBS4 303 315 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.021021 84.31 By MS/MS 7 0 1 1 1843600 1843600 0 4852 2704 5015 11409 9348 9348 1 28941 0 GEGPEVDVNLPK IPKMKMPKFSMPSLKGEGPEVDVNLPKADV SLKGEGPEVDVNLPKADVVVSGPKVDIEAP K G E P K A 0 0 1 1 0 0 2 2 0 0 1 1 0 0 2 0 0 0 0 2 0 0 12 0 1252.6299 Q09666 Q09666 1141 1152 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.0039542 106.62 By MS/MS 1.5 0.5 1 1 2 460950 460950 0 4853 1320 5016 11410;11411 9349 9349 1 142580 0 GEGQLGPAER LKQFAEMYVAKFAAKGEGQLGPAERAKKVE KFAAKGEGQLGPAERAKKVEDMMKKLWGDR K G E E R A 1 1 0 0 0 1 2 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 1012.4938 P13639 P13639 240 249 EEF2 Elongation factor 2 yes yes 2 0.0001459 150.81 By MS/MS 5.5 1.12 1 1 1 1 4 24551000 24551000 0 4854 602 5017 11412;11413;11414;11415 9350;9351;9352 9352 3 1766500 0 GEHALKDAR QCKNVQDAIADAEQRGEHALKDARNKLNDL ADAEQRGEHALKDARNKLNDLEEALQQAKE R G E A R N 2 1 0 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 995.51484 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 431 439 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.0026289 149.72 By MS/MS By MS/MS 3.47 1.65 2 4 3 3 2 3 8 9 7472600 1991900 5480800 + 4855 55 5018 11416;11417;11418;11419;11420;11421;11422;11423;11424;11425;11426;11427;11428;11429;11430;11431;11432 9353;9354;9355;9356;9357;9358;9359;9360;9361;9362;9363;9364;9365 9365 13 153110 2355300 GEHPGLSIGDVAK SAFFLFCSEYRPKIKGEHPGLSIGDVAKKL IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ K G E A K K 1 0 0 1 0 0 1 3 1 1 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1278.6568 P09429;B2RPK0 P09429 115 127 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 2 0.0088911 92.866 By MS/MS 8 0 1 1 620640 620640 0 4856 535 5019 11433 9366 9366 1 7835.5 0 GEHVPGFCLPK EELHKEIRLIGNESKGEHVPGFCLPKKGVT NESKGEHVPGFCLPKKGVTSILPVLREGVL K G E P K K 0 0 0 0 1 0 1 2 1 0 1 1 0 1 2 0 0 0 0 1 0 0 11 0 1239.607 Q92616 Q92616 2248 2258 GCN1L1 Translational activator GCN1 yes yes 3 0.03249 108.43 By MS/MS 2.5 0.5 1 1 2 604370 604370 0 4857 2064 5020 11434;11435 9367 9367 1 182470 0 GEIGDATPFNDAVNVQK GHLIECLQGKVSANKGEIGDATPFNDAVNV IGDATPFNDAVNVQKISNLLSDYGYHLRGN K G E Q K I 2 0 2 2 0 1 1 2 0 1 0 1 0 1 1 0 1 0 0 2 0 0 17 0 1773.8533 P30876 P30876 994 1010 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 3.2118E-41 261.38 By MS/MS 3 0 1 1 0 0 0 4858 781 5021 11436 9368 9368 1 0 0 GEINKVVNK QLMKPKKTEITDKLRGEINKVVNKYIDQGI ITDKLRGEINKVVNKYIDQGIAELVPGVLF R G E N K Y 0 0 2 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 2 0 0 9 1 999.57129 Q9Y265 Q9Y265 277 285 RUVBL1 RuvB-like 1 yes yes 2 0.009984 121.05 By MS/MS 6 0 1 1 2311700 2311700 0 4859 2815 5022 11437 9369 9369 1 15891 0 GEKDIPGLTDTTVPR VDANLSVLNLVIVKKGEKDIPGLTDTTVPR GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K G E P R R 0 1 0 2 0 0 1 2 0 1 1 1 0 0 2 0 3 0 0 1 0 0 15 1 1597.8312 P62753 P62753 117 131 RPS6 40S ribosomal protein S6 yes yes 3 0.00049342 127.57 By MS/MS 8 0 1 1 2198300 2198300 0 4860 1169 5023 11438 9370 9370 1 27753 0 GELLALVK YHSCKQYGITGENVRGELLALVKDLPSQLA ITGENVRGELLALVKDLPSQLAEIGAAAQQ R G E V K D 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 841.5273 Q96JB5 Q96JB5 177 184 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.0073118 114.78 By MS/MS 5 0 1 1 1083900 1083900 0 4861 2177 5024 11439 9371 9371 1 10871 0 GELLEAIKR IFWTNLSPNGGGEPKGELLEAIKRDFGSFD GGGEPKGELLEAIKRDFGSFDKFKEKLTAA K G E K R D 1 1 0 0 0 0 2 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1027.6026 P04179 P04179 115 123 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 2 0.0020641 133.58 By MS/MS 9 0 1 1 0 0 0 4862 469 5025 11440 9372 9372 1 0 0 GELVGGLDIVK KAYSNWPTYPQLYVKGELVGGLDIVKELKE LYVKGELVGGLDIVKELKENGELLPILRGE K G E V K E 0 0 0 1 0 0 1 3 0 1 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1098.6285 O76003 O76003 309 319 GLRX3 Glutaredoxin-3 yes yes 2 0.0094198 92.239 By MS/MS 7 0 1 1 1224600 1224600 0 4863 358 5026 11441 9373 9373 1 19225 0 GEMKGSAITGPVAK FLYFEDNAGVIVNNKGEMKGSAITGPVAKE KGEMKGSAITGPVAKECADLWPRIASNAGS K G E A K E 2 0 0 0 0 0 1 3 0 1 0 2 1 0 1 1 1 0 0 1 0 0 14 1 1344.7071 P62829 P62829 110 123 RPL23 60S ribosomal protein L23 yes yes 3 0.015035 85.271 By MS/MS 10 0 1 1 194790 194790 0 4864 1173 5027 11442 9374 9374 671 1 10498 0 GENALKDAK QISNLQQSISDAEQRGENALKDAKNKLNDL SDAEQRGENALKDAKNKLNDLEDALQQAKE R G E A K N 2 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 944.49271 CON__P04264;P04264 P04264 433 441 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.011354 134.23 By MS/MS By MS/MS 5.22 2.7 1 2 3 2 3 1 2 1 1 2 7 11 14558000 6831400 7726200 + 4865 471;45 5028 11443;11444;11445;11446;11447;11448;11449;11450;11451;11452;11453;11454;11455;11456;11457;11458;11459;11460 9375;9376;9377;9378;9379;9380;9381;9382;9383 9381 9 805080 4458900 GENCIAAGR DKAVRMGMGAVFFNKGENCIAAGRLFVEES AVFFNKGENCIAAGRLFVEESIHDEFVTRV K G E G R L 2 1 1 0 1 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 0 946.42906 Q3SY69;O75891 Q3SY69 725 733 ALDH1L2;ALDH1L1 Mitochondrial 10-formyltetrahydrofolate dehydrogenase;Cytosolic 10-formyltetrahydrofolate dehydrogenase no no 2 0.0020347 120.87 By MS/MS 4 0 1 1 913700 913700 0 4866 1578;353 5029 11461 9384 9384 1 85985 0 GENSWFSTQVDTVATK KKSIRVILDLTPNYRGENSWFSTQVDTVAT ENSWFSTQVDTVATKVKDALEFWLQAGVDG R G E T K V 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 2 3 1 0 2 0 0 16 0 1768.8268 P08195 P08195 314 329 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 3.515E-11 273.07 By MS/MS 4.5 0.5 1 1 2 1941400 1941400 0 4867 519 5030 11462;11463 9385 9385 1 89858 0 GEPVLLVGETGTGK PSSVLIEQLAVCVSKGEPVLLVGETGTGKT KGEPVLLVGETGTGKTSTIQYLAHITGHRL K G E G K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 0 2 0 0 2 0 0 14 0 1355.7296 Q9NU22 Q9NU22 670 683 MDN1 Midasin yes yes 2 0.00034869 166.11 By MS/MS 2 0.816 1 1 1 3 1319300 1319300 0 4868 2580 5031 11464;11465;11466 9386;9387;9388 9386 2 295240 0 GEQHGSSSGSSSSYGQHGSGSR SSYEQHGSRSGQSSRGEQHGSSSGSSSSYG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS R G E S R Q 0 1 0 0 0 2 1 6 2 0 0 0 0 0 0 9 0 0 1 0 0 0 22 0 2121.8696 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1910 1931 HRNR Hornerin yes no 2;3;4 1.5244E-07 185.16 By MS/MS By MS/MS 4.39 2.54 2 3 2 4 2 2 1 1 1 7 11 3472900 2102200 1370600 + 4869 73 5032 11467;11468;11469;11470;11471;11472;11473;11474;11475;11476;11477;11478;11479;11480;11481;11482;11483;11484 9389;9390;9391;9392;9393;9394;9395;9396;9397;9398;9399;9400;9401 9389 12 171300 720470 GESFYQDR LNKIYDALDVSLIERGESFYQDRMNDIVKE DVSLIERGESFYQDRMNDIVKEFEDRGFVQ R G E D R M 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 1000.425 P54136 P54136 334 341 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0031942 133.86 By MS/MS By matching 5 0 2 1 1 3330700 3276600 54167 4870 1043 5033 11485;11486 9402 9402 1 32862 45489 GESPVDYDGGR RYGIRGFPTIKIFQKGESPVDYDGGRTRSD IFQKGESPVDYDGGRTRSDIVSRALDLFSD K G E G R T 0 1 0 2 0 0 1 3 0 0 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1150.4891 Q15084 Q15084 246 256 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.021581 84.817 By MS/MS 6 0 1 1 1009900 1009900 0 4871 1488 5034 11487 9403 9403 1 6942.6 0 GESQTDIEITREEDFTR NPRIVLLDSSLEYKKGESQTDIEITREEDF SQTDIEITREEDFTRILQMEEEYIQQLCED K G E T R I 0 2 0 2 0 1 4 1 0 2 0 0 0 1 0 1 3 0 0 0 0 0 17 1 2024.9287 P49368 P49368 250 266 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0076956 111.72 By MS/MS 5 0 1 1 1753300 1753300 0 4872 947 5035 11488 9404 9404 1 17585 0 GETAVLQCIAGGSPAPR TPSFIRPLEDKTVTRGETAVLQCIAGGSPA TAVLQCIAGGSPAPRLNWTKDDGPLLVTER R G E P R L 3 1 0 0 1 1 1 3 0 1 1 0 0 0 2 1 1 0 0 1 0 0 17 0 1682.841 O94898 O94898 710 726 LRIG2 Leucine-rich repeats and immunoglobulin-like domains protein 2 yes yes 2 0.00034397 158.52 By MS/MS 3.5 0.5 1 1 2 387480 387480 0 4873 374 5036 11489;11490 9405 9405 1 20496 0 GETDLIQK VLPRIHDVLCKLVEKGETDLIQKAMDFVSQ LCKLVEKGETDLIQKAMDFVSQEQGEMVML K G E Q K A 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 902.47091 P42704 P42704 869 876 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.027723 89.296 By MS/MS 3.5 0.5 1 1 2 2044900 2044900 0 4874 886 5037 11491;11492 9406 9406 1 75614 0 GETVPLDVLQIK NKVQHITDATLAIVKGETVPLDVLQIKGEK IVKGETVPLDVLQIKGEKEQPVFAMTGLRW K G E I K G 0 0 0 1 0 1 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 12 0 1310.7446 Q53H12 Q53H12 185 196 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.00027214 133.23 By MS/MS 7 0.816 1 1 1 3 5798800 5798800 0 4875 1589 5038 11493;11494;11495 9407;9408;9409 9409 2 79962 0 GETVPLDVLQIKGEK NKVQHITDATLAIVKGETVPLDVLQIKGEK GETVPLDVLQIKGEKEQPVFAMTGLRWGSF K G E E K E 0 0 0 1 0 1 2 2 0 1 2 2 0 0 1 0 1 0 0 2 0 0 15 1 1624.9036 Q53H12 Q53H12 185 199 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.0018219 137.95 By MS/MS 7 0 1 1 780790 780790 0 4876 1589 5039 11496 9410 9410 1 12257 0 GEVPCTVTSASPLEEATLSELK QGVVSAFSTMMSVHRGEVPCTVTSASPLEE TSASPLEEATLSELKTVLKSFLSQGQVLKL R G E L K T 2 0 0 0 1 0 4 1 0 0 3 1 0 0 2 3 3 0 0 2 0 0 22 0 2317.1359 P48047 P48047 137 158 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 8.3853E-06 154.75 By MS/MS 9 0 1 1 174460 174460 0 4877 932 5040 11497 9411;9412 9411 2 3433.5 0 GEVVEGDPDK ITFQAQLVMVVRNPKGEVVEGDPDKVLRML VRNPKGEVVEGDPDKVLRMLYVWALCRDQD K G E D K V 0 0 0 2 0 0 2 2 0 0 0 1 0 0 1 0 0 0 0 2 0 0 10 0 1043.4771 O43615 O43615 406 415 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0014473 114.97 By MS/MS 7 0 1 1 1920200 1920200 0 4878 221 5041 11498 9413 9413 1 30143 0 GEVVEGDPDKVLR ITFQAQLVMVVRNPKGEVVEGDPDKVLRML PKGEVVEGDPDKVLRMLYVWALCRDQDELN K G E L R M 0 1 0 2 0 0 2 2 0 0 1 1 0 0 1 0 0 0 0 3 0 0 13 1 1411.7307 O43615 O43615 406 418 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0015913 150.04 By MS/MS 7 0 1 1 3843000 3843000 0 4879 221 5042 11499 9414 9414 1 60328 0 GEYQGVFHCAVETAK CQPLDVLKTRLMNSKGEYQGVFHCAVETAK GEYQGVFHCAVETAKLGPLAFYKGLVPAGI K G E A K L 2 0 0 0 1 1 2 2 1 0 0 1 0 1 0 0 1 0 1 2 0 0 15 0 1694.7723 Q9UBX3 Q9UBX3 232 246 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 1.6226E-07 226.42 By MS/MS 8 0 2 2 7483700 7483700 0 4880 2709 5043 11500;11501 9415;9416 9415 2 94481 0 GFAAQFIK IFGLALLNSSSSDLRGFAAQFIKQKLPDLL SSSSDLRGFAAQFIKQKLPDLLRSYIDADV R G F I K Q 2 0 0 0 0 1 0 1 0 1 0 1 0 2 0 0 0 0 0 0 0 0 8 0 880.48069 A5YKK6 A5YKK6 143 150 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.050562 82.263 By MS/MS 2 0 1 1 172480 172480 0 4881 19 5044 11502 9417 9417 1 58341 0 GFAELEQQLR G F L R 1 1 0 0 0 2 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 10 0 1189.6091 REV__Q9H3S7 yes yes 2 0.0029012 110.31 By MS/MS By MS/MS 4.68 3.1 4 2 3 1 2 1 1 2 1 2 13 6 9658300 8350900 1307400 + 4882 2984 5045 11503;11504;11505;11506;11507;11508;11509;11510;11511;11512;11513;11514;11515;11516;11517;11518;11519;11520;11521 9418;9419;9420;9421;9422;9423;9424;9425;9426;9427;9428 9426 11 471310 1305600 GFAFISFHR SRIYLAKDKTTGQSKGFAFISFHRREDAAR TTGQSKGFAFISFHRREDAARAIAGVSGFG K G F H R R 1 1 0 0 0 0 0 1 1 1 0 0 0 3 0 1 0 0 0 0 0 0 9 0 1080.5505 O75821 O75821 281 289 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 0.0009371 134.81 By MS/MS 7.75 0.829 2 1 1 4 8448000 8448000 0 4883 348 5046 11522;11523;11524;11525 9429;9430;9431 9429 3 132930 0 GFAFVQYVNER IFSKYGKIVGCSVHKGFAFVQYVNERNARA SVHKGFAFVQYVNERNARAAVAGEDGRMIA K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 P07910 P07910 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 0.00027044 135.55 By MS/MS 6.5 0.5 1 1 2 2464700 2464700 0 4884 514 5047 11526;11527 9432;9433 9432 2 33436 0 GFAFVTFESPADAK VEVLLMKDRETNKSRGFAFVTFESPADAKD RGFAFVTFESPADAKDAARDMNGKSLDGKA R G F A K D 3 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 1 0 0 1 0 0 14 0 1485.714 P38159;Q96E39;O75526;Q8N7X1 P38159 50 63 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 2 8.4748E-08 221.59 By MS/MS 7 0 1 1 544910 544910 0 4885 848 5048 11528 9434 9434 1 8554.1 0 GFALVGVGSEASSK LEIKFFENRANGQSKGFALVGVGSEASSKK KGFALVGVGSEASSKKLMDLLPKRELHGQN K G F S K K 2 0 0 0 0 0 1 3 0 0 1 1 0 1 0 3 0 0 0 2 0 0 14 0 1307.6721 Q16630 Q16630 125 138 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 2 0.00041841 138.99 By MS/MS 5 0 1 1 633410 633410 0 4886 1554 5049 11529 9435 9435 1 6352.7 0 GFAQYELFK NLHKKRHHLSTVTSKGFAQYELFKSSALDD STVTSKGFAQYELFKSSALDDTITASQTAI K G F F K S 1 0 0 0 0 1 1 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1101.5495 Q9H900 Q9H900 202 210 ZWILCH Protein zwilch homolog yes yes 2 0.0064955 106.6 By MS/MS 5 0 1 1 867540 867540 0 4887 2477 5050 11530 9436 9436 1 8701 0 GFCFITFK ESIELPMDNKTNKRRGFCFITFKEEEPVKK NKTNKRRGFCFITFKEEEPVKKIMEKKYHN R G F F K E 0 0 0 0 1 0 0 1 0 1 0 1 0 3 0 0 1 0 0 0 0 0 8 0 1018.4946 Q14103 Q14103 224 231 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 0.031911 89.369 By MS/MS 7 0 1 1 151570 151570 0 4888 1419 5051 11531 9437 9437 1 2379.3 0 GFCFITYTDEEPVKK ENIELPMDTKTNERRGFCFITYTDEEPVKK GFCFITYTDEEPVKKLLESRYHQIGSGKCE R G F K K L 0 0 0 1 1 0 2 1 0 1 0 2 0 2 1 0 2 0 1 1 0 0 15 1 1832.8655 O14979 O14979 275 289 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 0.0020987 158.06 By MS/MS 7 0 1 1 496860 496860 0 4889 152 5052 11532 9438 9438 1 7799.8 0 GFDILGIKPVQR WRMLLCEAVAAVMAKGFDILGIKPVQRM__ MAKGFDILGIKPVQRM______________ K G F Q R M 0 1 0 1 0 1 0 2 0 2 1 1 0 1 1 0 0 0 0 1 0 0 12 1 1341.7769 P54136 P54136 648 659 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.010251 112.11 By MS/MS 5 0 2 2 1365100 1365100 0 4890 1043 5053 11533;11534 9439;9440 9440 2 13691 0 GFEEVIK AYTGNNSSQIQAAMKGFEEVIKKFPRCAEG SQIQAAMKGFEEVIKKFPRCAEGYALYAQA K G F I K K 0 0 0 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 7 0 820.43307 O94826 O94826 464 470 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.027749 106.42 By MS/MS 5 0 1 1 902410 902410 0 4891 369 5054 11535 9441 9441 1 9050.7 0 GFEGSFEELCR VVPDVETLCSWAQKRGFEGSFEELCRNKDV AQKRGFEGSFEELCRNKDVKKAILEDMVRL R G F C R N 0 1 0 0 1 0 3 2 0 0 1 0 0 2 0 1 0 0 0 0 0 0 11 0 1329.566 P33121 P33121 616 626 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 5.5379E-07 192.91 By MS/MS 5 0 1 1 1346800 1346800 0 4892 799 5055 11536 9442 9442 1 13508 0 GFELTFK VRETHSLFFRSLKDRGFELTFKTADDPSLS FFRSLKDRGFELTFKTADDPSLSLIKYGEF R G F F K T 0 0 0 0 0 0 1 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 7 0 840.43815 P39656 P39656 71 77 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.0080711 143.02 By MS/MS 8 1.41 1 1 1 1 1 5 9290000 9290000 0 4893 855 5056 11537;11538;11539;11540;11541 9443;9444;9445 9443 3 76044 0 GFFEGTIASK IMPLDTNWPLLTVSKGFFEGTIASKGKGGA LTVSKGFFEGTIASKGKGGALAADIDIDTV K G F S K G 1 0 0 0 0 0 1 2 0 1 0 1 0 2 0 1 1 0 0 0 0 0 10 0 1055.5288 P53621 P53621 816 825 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 3.3662E-08 199.68 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 8888200 8888200 0 4894 1034 5057 11542;11543;11544;11545;11546;11547 9446;9447;9448;9449;9450;9451;9452 9449 7 630900 0 GFFGFPGPR ______________________________ LFDLFRGFFGFPGPRSHRDPFFGGMTRDED R G F P R S 0 1 0 0 0 0 0 3 0 0 0 0 0 3 2 0 0 0 0 0 0 0 9 0 980.48684 O00165 O00165 9 17 HAX1 HCLS1-associated protein X-1 yes yes 2 0.0022597 118.01 By MS/MS 8 0.816 1 1 1 3 1425400 1425400 0 4895 86 5058 11548;11549;11550 9453;9454;9455 9454 3 21464 0 GFGDVGEAK GNTFSHHSMVSMLGKGFGDVGEAKGGSTTG VSMLGKGFGDVGEAKGGSTTGSQFLEQFKT K G F A K G 1 0 0 1 0 0 1 3 0 0 0 1 0 1 0 0 0 0 0 1 0 0 9 0 878.4134 Q14157 Q14157 345 353 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 0.0044905 110.12 By MS/MS 3 0 1 1 894530 894530 0 4896 1424 5059 11551 9456 9456 1 16367 0 GFGFGLVK SYADLGKAARDIFNKGFGFGLVKLDVKTKS ARDIFNKGFGFGLVKLDVKTKSCSGVEFST K G F V K L 0 0 0 0 0 0 0 3 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 823.45922 P45880 P45880 32 39 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.045937 84.025 By MS/MS 8 0 1 1 1341600 1341600 0 4897 903 5060 11552 9457 9457 1 16938 0 GFGFILFK VDCTIKMDPNTGRSRGFGFILFKDAASVEK PNTGRSRGFGFILFKDAASVEKVLDQKEHR R G F F K D 0 0 0 0 0 0 0 2 0 1 1 1 0 3 0 0 0 0 0 0 0 0 8 0 927.52182 Q99729 Q99729 111 118 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 2 0.030511 89.903 By MS/MS 7 0 1 1 49169 49169 0 4898 2263 5061 11553 9458;9459 9459 2 771.86 0 GFGFVCFSSPEEATK TITSAKVMMEGGRSKGFGFVCFSSPEEATK GFGFVCFSSPEEATKAVTEMNGRIVATKPL K G F T K A 1 0 0 0 1 0 2 2 0 0 0 1 0 3 1 2 1 0 0 1 0 0 15 0 1661.7396 P11940;Q9H361;Q4VXU2;Q13310 P11940 334 348 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 no no 2 6.6955E-06 202.05 By MS/MS 5.5 1.12 1 1 1 1 4 12057000 12057000 0 4899 586;1369 5062 11554;11555;11556;11557 9460;9461;9462;9463 9460 4 125560 0 GFGFVDFNSEEDAK VRARIVTDRETGSSKGFGFVDFNSEEDAKA KGFGFVDFNSEEDAKAAKEAMEDGEIDGNK K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338 P19338 611 624 NCL Nucleolin yes yes 2 3.2225E-11 237.76 By MS/MS 5 0.816 1 1 1 3 2241600 2241600 0 4900 659 5063 11558;11559;11560 9464;9465 9464 2 140970 0 GFGFVSFER ALSVKVMTDESGKSKGFGFVSFERHEDAQK ESGKSKGFGFVSFERHEDAQKAVDEMNGKE K G F E R H 0 1 0 0 0 0 1 2 0 0 0 0 0 3 0 1 0 0 0 1 0 0 9 0 1044.5029 P11940;Q9H361 P11940 232 240 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.0013644 143.01 By MS/MS 5.5 0.5 1 1 2 5066700 5066700 0 4901 586 5064 11561;11562 9466 9466 1 49660 0 GFGFVSFERHEDAQK ALSVKVMTDESGKSKGFGFVSFERHEDAQK GFGFVSFERHEDAQKAVDEMNGKELNGKQI K G F Q K A 1 1 0 1 0 1 2 2 1 0 0 1 0 3 0 1 0 0 0 1 0 0 15 1 1752.822 P11940;Q9H361 P11940 232 246 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 3 0.016057 80.245 By MS/MS 5 0 1 1 5774700 5774700 0 4902 586 5065 11563 9467 9467 1 57917 0 GFGFVSYEK TLSVKVMRDPNGKSKGFGFVSYEKHEDANK PNGKSKGFGFVSYEKHEDANKAVEEMNGKE K G F E K H 0 0 0 0 0 0 1 2 0 0 0 1 0 2 0 1 0 0 1 1 0 0 9 0 1032.4916 Q13310 Q13310 232 240 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.0024578 115.49 By MS/MS 5 0 1 1 953040 953040 0 4903 1369 5066 11564 9468 9468 1 9558.5 0 GFGFVSYEKHEDANK TLSVKVMRDPNGKSKGFGFVSYEKHEDANK GFGFVSYEKHEDANKAVEEMNGKEISGKII K G F N K A 1 0 1 1 0 0 2 2 1 0 0 2 0 2 0 1 0 0 1 1 0 0 15 1 1726.7951 Q13310 Q13310 232 246 PABPC4 Polyadenylate-binding protein 4 yes yes 3 0.0088655 87.831 By MS/MS 5 0 1 1 1748700 1748700 0 4904 1369 5067 11565 9469 9469 1 17539 0 GFGFVTFADPASVDK RECMVMRDPTTKRSRGFGFVTFADPASVDK GFGFVTFADPASVDKVLGQPHHELDSKTID R G F D K V 2 0 0 2 0 0 0 2 0 0 0 1 0 3 1 1 1 0 0 2 0 0 15 0 1556.7511 Q96DH6 Q96DH6 63 77 MSI2 RNA-binding protein Musashi homolog 2 yes yes 2 0.0003954 140.14 By MS/MS 7 0 1 1 85810 85810 0 4905 2134 5068 11566 9470;9471 9470 2 1347.1 0 GFGFVTFENSADADR KILDVEIIFNERGSKGFGFVTFENSADADR GFGFVTFENSADADRAREKLHGTVVEGRKI K G F D R A 2 1 1 2 0 0 1 2 0 0 0 0 0 3 0 1 1 0 0 1 0 0 15 0 1631.7216 O43251;Q9NWB1 O43251 161 175 RBFOX2;RBFOX1 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 yes no 2 7.5798E-11 229.56 By MS/MS 6 0 1 1 1415400 1415400 0 4906 199 5069 11567 9472 9472 1 9730 0 GFGGIGGILR EIVTDKSQEGSQFVKGFGGIGGILRYRVDF SQFVKGFGGIGGILRYRVDFQGMEYQGGDD K G F L R Y 0 1 0 0 0 0 0 5 0 2 1 0 0 1 0 0 0 0 0 0 0 0 10 0 945.5396 P62495 P62495 405 414 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 2 0.00055176 132.29 By MS/MS 6 0 1 1 1286300 1286300 0 4907 1162 5070 11568 9473 9473 1 8842.6 0 GFGIFVEGVEPGSK RESPLQFSLNGGSEKGFGIFVEGVEPGSKA KGFGIFVEGVEPGSKAADSGLKRGDQIMEV K G F S K A 0 0 0 0 0 0 2 4 0 1 0 1 0 2 1 1 0 0 0 2 0 0 14 0 1421.7191 Q8TEU7 Q8TEU7 553 566 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 2 0.00085198 127.87 By MS/MS 2 0 1 1 84580 84580 0 4908 2003 5071 11569 9474;9475;9476 9475 3 28608 0 GFGSDQSENVDR RTWLGVWGVRTMQARGFGSDQSENVDRGAG QARGFGSDQSENVDRGAGSIREAGGAFGKR R G F D R G 0 1 1 2 0 1 1 2 0 0 0 0 0 1 0 2 0 0 0 1 0 0 12 0 1309.5535 Q9UII2 Q9UII2 24 35 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 0.00061934 132.25 By MS/MS 10 0 2 2 187410 187410 0 4909 2743 5072 11570;11571 9477;9478 9477 2 10101 0 GFGYGQGAGALVHAQ EIYCKGCYAKNFGPKGFGYGQGAGALVHAQ GFGYGQGAGALVHAQ_______________ K G F A Q - 3 0 0 0 0 2 0 5 1 0 1 0 0 1 0 0 0 0 1 1 0 0 15 0 1431.6895 Q16527 Q16527 179 193 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 0.00027891 173.24 By MS/MS 9 0 1 1 3529100 3529100 0 4910 1548 5073 11572 9479 9479 1 69454 0 GFIAGIDLK NPLYKERHQVQLLGRGFIAGIDLKQQKREQ VQLLGRGFIAGIDLKQQKREQSRFYGDLME R G F L K Q 1 0 0 1 0 0 0 2 0 2 1 1 0 1 0 0 0 0 0 0 0 0 9 0 932.53312 Q9BUQ8 Q9BUQ8 302 310 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0054354 108.46 By MS/MS 4 0 1 1 401220 401220 0 4911 2326 5074 11573 9480 9480 1 37757 0 GFIDALTR TLDEFGTARRSTVVRGFIDALTRGGPGGTP RRSTVVRGFIDALTRGGPGGTPRPIEMHSH R G F T R G 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 891.48142 Q9Y2V7 Q9Y2V7 280 287 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.014237 106.04 By MS/MS 5 0 1 1 843440 843440 0 4912 2845 5075 11574 9481 9481 1 8459.3 0 GFKDQIYDIFQK IKMFVLDEADEMLSRGFKDQIYDIFQKLNS LSRGFKDQIYDIFQKLNSNTQVVLLSATMP R G F Q K L 0 0 0 2 0 2 0 1 0 2 0 2 0 2 0 0 0 0 1 0 0 0 12 1 1500.7613 P60842 P60842 191 202 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 3.7408E-12 247.96 By MS/MS 6.75 0.829 4 2 2 8 144510000 144510000 0 4913 1097 5076 11575;11576;11577;11578;11579;11580;11581;11582 9482;9483;9484;9485;9486;9487;9488;9489 9483 8 1021400 0 GFLAEEK KLDLSDTKSIRAFAKGFLAEEKHLHVLINN KSIRAFAKGFLAEEKHLHVLINNAGVMMCP K G F E K H 1 0 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 792.40177 Q8TC12 Q8TC12 113 119 RDH11 Retinol dehydrogenase 11 yes yes 2 0.0023811 168.74 By MS/MS 8 0 1 1 2237700 2237700 0 4914 1988 5077 11583 9490 9490 1 28251 0 GFLDACEK FGSNIPKQFVPAVEKGFLDACEKGPLSGHK FVPAVEKGFLDACEKGPLSGHKLSGLRFVL K G F E K G 1 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 938.41677 Q96RP9 Q96RP9 589 596 GFM1 Elongation factor G, mitochondrial yes yes 2 0.023363 95.909 By MS/MS 5 0 1 1 908090 908090 0 4915 2223 5078 11584 9491 9491 1 9107.7 0 GFLNSSELSGLPAGPDR MHCQTLKDQPSAYSKGFLNSSELSGLPAGP LNSSELSGLPAGPDREGSLKDQLALAIGKL K G F D R E 1 1 1 1 0 0 1 3 0 0 3 0 0 1 2 3 0 0 0 0 0 0 17 0 1715.8479 P43897 P43897 162 178 TSFM Elongation factor Ts, mitochondrial yes yes 2 1.149E-07 258.39 By MS/MS 8 0 1 1 3696400 3696400 0 4916 901 5079 11585 9492 9492 1 46667 0 GFNAVMIR LRELIRDEGVTSLYKGFNAVMIRAFPANAA GVTSLYKGFNAVMIRAFPANAACFLGFEVA K G F I R A 1 1 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 8 0 906.47456 O43772 O43772 268 275 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.02498 104.45 By MS/MS 8 0 1 1 551860 551860 0 4917 234 5080 11586 9493 9493 1 6967.1 0 GFNLNPLNQDELK KVNRLFEAQGKPELKGFNLNPLNQDELKAL LKGFNLNPLNQDELKALKVILKG_______ K G F L K A 0 0 3 1 0 1 1 1 0 0 3 1 0 1 1 0 0 0 0 0 0 0 13 0 1500.7573 Q9NUG6 Q9NUG6 113 125 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 2 0.00092287 127.51 By MS/MS 10 0 1 1 320460 320460 0 4918 2581 5081 11587 9494 9494 1 17271 0 GFNLPYQDAR EQLRMEETPTEYLQRGFNLPYQDARKCLGR EYLQRGFNLPYQDARKCLGRFGLESHAHTI R G F A R K 1 1 1 1 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1179.5673 Q8NE71 Q8NE71 714 723 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 0.0091069 96.342 By MS/MS 4 0 1 1 1129800 1129800 0 4919 1960 5082 11588 9495 9495 1 106320 0 GFPPEAINNFCAR WDDPRLFTLTALRRRGFPPEAINNFCARVG RRGFPPEAINNFCARVGVTVAQTTMEPHLL R G F A R V 2 1 2 0 1 0 1 1 0 1 0 0 0 2 2 0 0 0 0 0 0 0 13 0 1491.6929 P47897 P47897 526 538 QARS Glutamine--tRNA ligase yes yes 2 0.0090827 91.469 By MS/MS 4.5 0.5 1 1 2 905050 905050 0 4920 928 5083 11589;11590 9496 9496 1 69149 0 GFPTIYFSPANK MDATANDVPSPYEVRGFPTIYFSPANKKLN EVRGFPTIYFSPANKKLNPKKYEGGRELSD R G F N K K 1 0 1 0 0 0 0 1 0 1 0 1 0 2 2 1 1 0 1 0 0 0 12 0 1340.6765 P30101 P30101 449 460 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.00071804 130.41 By MS/MS 6 0 1 1 768260 768260 0 4921 768 5084 11591 9497 9497 1 5281.2 0 GFQEVVTPNIFNSR YNALIEFIRSEYRKRGFQEVVTPNIFNSRL RGFQEVVTPNIFNSRLWMTSGHWQHYSENM R G F S R L 0 1 2 0 0 1 1 1 0 1 0 0 0 2 1 1 1 0 0 2 0 0 14 0 1606.8104 P26639 P26639 368 381 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 0.014627 87.831 By MS/MS 4.5 0.5 1 1 2 980880 980880 0 4922 734 5085 11592;11593 9498;9499 9498 2 39448 0 GFQFVSSSLPDICYR RGMRSRGRGGFTSDRGFQFVSSSLPDICYR GFQFVSSSLPDICYRCGESGHLAKDCDLQE R G F Y R C 0 1 0 1 1 1 0 1 0 1 1 0 0 2 1 3 0 0 1 1 0 0 15 0 1774.8349 P62633 P62633 42 56 CNBP Cellular nucleic acid-binding protein yes yes 2 2.9332E-07 215.72 By MS/MS 9 0 1 1 93606 93606 0 4923 1163 5086 11594 9500 9500 1 1842.2 0 GFQMLADPR ______________________________ SESVQKGFQMLADPRSFDSNAFTLLLRAAF K G F P R S 1 1 0 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 9 0 1033.5015 Q9UBI1 Q9UBI1 10 18 COMMD3 COMM domain-containing protein 3 yes yes 2 0.0058724 107.69 By MS/MS 9 0 1 1 399660 399660 0 4924 2698 5087 11595 9501 9501 1 7865.4 0 GFSEAAAPR ADLESLLQTPGGKPRGFSEAAAPRAFGLHC PGGKPRGFSEAAAPRAFGLHCRLSIHLQHK R G F P R A 3 1 0 0 0 0 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 9 0 904.44028 Q86XI2 Q86XI2 812 820 NCAPG2 Condensin-2 complex subunit G2 yes yes 2 0.0023888 116.37 By MS/MS 3 0 1 1 345360 345360 0 4925 1842 5088 11596 9502 9502 1 6319.1 0 GFSLEELR RCPTVRYHTKVRAGRGFSLEELRVAGIHKK TKVRAGRGFSLEELRVAGIHKKVARTIGIS R G F L R V 0 1 0 0 0 0 2 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 949.4869 P26373 P26373 75 82 RPL13 60S ribosomal protein L13 yes yes 2 0.00033209 163.67 By MS/MS 9 1 1 1 2 7689200 7689200 0 4926 731 5089 11597;11598 9503;9504 9503 2 100610 0 GFSLLATEDK EELGFRPEYSASQLKGFSLLATEDKEALKK ASQLKGFSLLATEDKEALKKQLPGVKSEGK K G F D K E 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1079.5499 P09874 P09874 183 192 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 2.494E-05 164.68 By MS/MS 3.5 0.5 1 1 2 1692700 1692700 0 4927 543 5090 11599;11600 9505;9506 9505 2 122500 0 GFSLLATEDKEALKK EELGFRPEYSASQLKGFSLLATEDKEALKK GFSLLATEDKEALKKQLPGVKSEGKRKGDE K G F K K Q 2 0 0 1 0 0 2 1 0 0 3 3 0 1 0 1 1 0 0 0 0 0 15 2 1648.9036 P09874 P09874 183 197 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.023283 78.964 By MS/MS 3.5 0.5 1 1 2 6534800 6534800 0 4928 543 5091 11601;11602 9507 9507 1 580180 0 GFSNLKK LPKAYIQENLELVEKGFSNLKKQIENARMF ENLELVEKGFSNLKKQIENARMFGIPVVVA K G F K K Q 0 0 1 0 0 0 0 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 7 1 792.44939 P11586 P11586 734 740 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.04347 128.38 By MS/MS 4 0 1 1 1459400 1459400 0 4929 582 5092 11603 9508 9508 1 137340 0 GFSSGSAVVSGGSR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G F S R R 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 14 0 1253.6 CON__P35908v2;CON__P35908;P35908;CON__Q3TTY5 CON__P35908v2 21 34 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 2 2.8268E-29 267.07 By MS/MS By MS/MS 5.59 3.06 3 3 3 2 2 2 3 3 2 4 12 15 349300000 112890000 236410000 + 4930 55;65 5093 11604;11605;11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617;11618;11619;11620;11621;11622;11623;11624;11625;11626;11627;11628;11629;11630 9509;9510;9511;9512;9513;9514;9515;9516;9517;9518;9519;9520;9521;9522;9523;9524;9525;9526;9527;9528;9529;9530;9531;9532;9533;9534;9535;9536;9537;9538;9539;9540 9512 32 9161900 103340000 GFSSGSAVVSGGSRR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR GFSSGSAVVSGGSRRSTSSFSCLSRHGGGG R G F R R S 1 2 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 15 1 1409.7011 CON__P35908v2;CON__P35908;P35908;CON__Q3TTY5 CON__P35908v2 21 35 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 2 0.0058872 112.83 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 2478500 1862300 616240 + 4931 55;65 5094 11631;11632;11633;11634;11635;11636 9541 9541 1 260060 616240 GFSYLNER DKGLLLLLRFLSIPKGFSYLNERGYVAKQL RFLSIPKGFSYLNERGYVAKQLEKWHREYN K G F E R G 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 8 0 984.46649 Q6R327 Q6R327 814 821 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.01647 103.56 By MS/MS 2 0 1 1 224650 224650 0 4932 1724 5095 11637 9542 9542 1 75985 0 GFTAAGILSAHK VGFIGAGQLAYALARGFTAAGILSAHKIIA LARGFTAAGILSAHKIIASSPEMNLPTVSA R G F H K I 3 0 0 0 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 0 0 0 12 0 1171.635 Q96C36 Q96C36 18 29 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 8.6315E-07 200.71 By MS/MS 8.4 1.02 1 2 1 1 5 18709000 18709000 0 4933 2120 5096 11638;11639;11640;11641;11642 9543;9544;9545;9546 9543 4 248430 0 GFTAAGVLAAHK VGFIGAGQLAFALAKGFTAAGVLAAHKIMA LAKGFTAAGVLAAHKIMASSPDMDLATVSA K G F H K I 4 0 0 0 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1141.6244 P32322 P32322 18 29 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 0.0002338 166.07 By MS/MS 8 0 1 1 6596600 6596600 0 4934 797 5097 11643 9547 9547 1 83281 0 GFTESFGAANISQAAR LSGQAQPPEGSEDPRGFTESFGAANISQAA FTESFGAANISQAARERDCESVCFIGRPWR R G F A R E 4 1 1 0 0 1 1 2 0 1 0 0 0 2 0 2 1 0 0 0 0 0 16 0 1625.7798 Q12789 Q12789 1958 1973 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00096689 148.89 By MS/MS 2 0 1 1 178550 178550 0 4935 1328 5098 11644 9548 9548 1 60393 0 GFTLNDAANSR TQAMEVKAFAETHIKGFTLNDAANSRLIIT THIKGFTLNDAANSRLIITQVRRDYLKEAV K G F S R L 2 1 2 1 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1164.5523 P42704 P42704 1099 1109 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.1854E-09 220.82 By MS/MS 4.67 1.49 2 1 1 1 1 6 26063000 26063000 0 4936 886 5099 11645;11646;11647;11648;11649;11650 9549;9550;9551;9552;9553 9551 5 669560 0 GFVEIQTPK QSGICHLFRETLINKGFVEIQTPKIISAAS ETLINKGFVEIQTPKIISAASEGGANVFTV K G F P K I 0 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 9 0 1017.5495 P14868 P14868 214 222 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.013277 94.692 By MS/MS 2 0.816 1 1 1 3 438460 438460 0 4937 620 5100 11651;11652;11653 9554 9554 1 102530 0 GFVLQDTVEQLR QTKITQDIFQQLLKRGFVLQDTVEQLRCEH LKRGFVLQDTVEQLRCEHCARFLADRFVEG R G F L R C 0 1 0 1 0 2 1 1 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 1403.7409 P56192 P56192 377 388 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 9.3277E-06 180.19 By MS/MS 4 0 1 1 5709000 5709000 0 4938 1067 5101 11654 9555 9555 1 537260 0 GFVQVDDGR YQDRMNDIVKEFEDRGFVQVDDGRKIVFVP KEFEDRGFVQVDDGRKIVFVPGCSIPLTIV R G F G R K 0 1 0 2 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 9 0 991.47231 P54136 P54136 353 361 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.012897 95.358 By MS/MS 5 0 1 1 1234100 1234100 0 4939 1043 5102 11655 9556 9556 1 12378 0 GFVVINQK KIIELKRKVCGDSDKGFVVINQKGIDPFSL VCGDSDKGFVVINQKGIDPFSLDALSKEGI K G F Q K G 0 0 1 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 903.5178 P40227;Q92526 P40227 288 295 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 0.018588 101.21 By MS/MS 6.5 0.5 1 1 2 9525500 9525500 0 4940 858 5103 11656;11657 9557 9557 1 72951 0 GFYDKDSSGWSSSK GRYIPPHLRNREATKGFYDKDSSGWSSSKD KGFYDKDSSGWSSSKDKDAYSSFGSRSDSR K G F S K D 0 0 0 2 0 0 0 2 0 0 0 2 0 1 0 5 0 1 1 0 0 0 14 1 1549.6685 O00571 O00571 51 64 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.0022149 146.67 By MS/MS 5 0 1 1 943440 943440 0 4941 116 5104 11658 9558 9558 1 9462.2 0 GFYIYQEGVK TQMVSKGFLGRKSGKGFYIYQEGVKRKDLN RKSGKGFYIYQEGVKRKDLNSDMDSILASL K G F V K R 0 0 0 0 0 1 1 2 0 1 0 1 0 1 0 0 0 0 2 1 0 0 10 0 1202.5972 P40939 P40939 635 644 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0010212 123.21 By MS/MS By MS/MS 5 0 2 1 1 13091000 13054000 37075 4942 865 5105 11659;11660 9559;9560 9560 2 130930 31135 GGAAVDPDSGLEHSAHVLEK EGINKSEKRMKLTLKGGAAVDPDSGLEHSA DPDSGLEHSAHVLEKGGKVFSATLGLVDIV K G G E K G 3 0 0 2 0 0 2 3 2 0 2 1 0 0 1 2 0 0 0 2 0 0 20 0 1987.9599 P09874 P09874 529 548 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.04412 61.265 By MS/MS 4.5 0.5 1 1 2 5805400 5805400 0 4943 543 5106 11661;11662 9561 9561 1 488190 0 GGAEQFMEETER FTGCPKAKTCTFILRGGAEQFMEETERSLH ILRGGAEQFMEETERSLHDAIMIVRRAIKN R G G E R S 1 1 0 0 0 1 4 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 12 0 1382.5772 Q99832 Q99832 376 387 CCT7 T-complex protein 1 subunit eta yes yes 2 2.3386E-34 313.3 By MS/MS By matching 5.22 2.48 1 1 1 3 2 1 8 1 64885000 64839000 46140 4944 2270 5107;5108 11663;11664;11665;11666;11667;11668;11669;11670;11671 9562;9563;9564;9565;9566 9563 1054 5 544930 47280 GGAGVGSMTK FYTRAASTARHLYLRGGAGVGSMTKIYGGR HLYLRGGAGVGSMTKIYGGRQRNGVMPSHF R G G T K I 1 0 0 0 0 0 0 4 0 0 0 1 1 0 0 1 1 0 0 1 0 0 10 0 863.4171 P39019 P39019 68 77 RPS19 40S ribosomal protein S19 yes yes 2 0.00032266 138.06 By MS/MS 9.67 0.471 1 2 3 20254000 20254000 0 4945 853 5109;5110 11672;11673;11674 9567;9568 9567 437 2 1086000 0 GGANLIK AFQTSEKKFHIGCEKGGANLIKELIDDFIF KFHIGCEKGGANLIKELIDDFIFPASNVYL K G G I K E 1 0 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 671.39662 Q93008;O00507 Q93008 1454 1460 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.034507 101.33 By MS/MS 1.5 0.5 1 1 2 497530 497530 0 4946 2085 5111 11675;11676 9569 9569 1 162880 0 GGCNINAIR KVSVPSTVISRVIGRGGCNINAIREFTGAH SRVIGRGGCNINAIREFTGAHIDIDKQKDK R G G I R E 1 1 2 0 1 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 973.47635 O75179 O75179 1744 1752 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.019516 89.142 By MS/MS 1.5 0.5 1 1 2 114080 114080 0 4947 304 5112 11677;11678 9570 9570 1 34030 0 GGDCLTSQTR AFAAGIGWLITFCSKGGDCLTSQTRLRLSG TFCSKGGDCLTSQTRLRLSGMLDGLVNVGW K G G T R L 0 1 0 1 1 1 0 2 0 0 1 0 0 0 0 1 2 0 0 0 0 0 10 0 1093.4822 Q8IXB1 Q8IXB1 267 276 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.0031145 109.83 By MS/MS 4.5 0.5 1 1 2 1513400 1513400 0 4948 1874 5113 11679;11680 9571 9571 1 53939 0 GGDDLGTEIANTLYR FVDCSASATPEFEGRGGDDLGTEIANTLYR GGDDLGTEIANTLYRIFNNKSSVDLKTLCI R G G Y R I 1 1 1 2 0 0 1 3 0 1 2 0 0 0 0 0 2 0 1 0 0 0 15 0 1593.7635 Q15024 Q15024 97 111 EXOSC7 Exosome complex component RRP42 yes yes 2 2.1657E-43 317.31 By MS/MS 8 0.816 1 1 1 3 676550 676550 0 4949 1475 5114 11681;11682;11683 9572;9573 9573 2 9514 0 GGDPSKEPER VGPKQYPYNNLYLERGGDPSKEPERVVHYE LYLERGGDPSKEPERVVHYEI_________ R G G E R V 0 1 0 1 0 0 2 2 0 0 0 1 0 0 2 1 0 0 0 0 0 0 10 1 1070.4993 O95169 O95169 171 180 NDUFB8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes yes 2 0.0057875 120.31 By MS/MS 9 0 1 1 319630 319630 0 4950 390 5115 11684 9574 9574 1 6290.4 0 GGDRIPADLR INAEEVVVGDLVEVKGGDRIPADLRIISAN LVEVKGGDRIPADLRIISANGCKVDNSSLT K G G L R I 1 2 0 2 0 0 0 2 0 1 1 0 0 0 1 0 0 0 0 0 0 0 10 1 1068.5676 P05023 P05023 195 204 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.031506 72.434 By MS/MS 3 1.41 1 1 1 1 1 5 4390200 4390200 0 4951 481 5116 11685;11686;11687;11688;11689 9575;9576;9577 9575 3 643090 0 GGDSIGETPTPGASK PGHGSGWAETPRTDRGGDSIGETPTPGASK GGDSIGETPTPGASKRKSRWDETPASQMGG R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00041697 134.49 By MS/MS 3 0 1 1 478220 478220 0 4952 332 5117 11690 9578 9578 1 8750 0 GGEDLRQDQR IIRGHDEREHPFLVKGGEDLRQDQRVEQLF PFLVKGGEDLRQDQRVEQLFQVMNGILAQD K G G Q R V 0 2 0 2 0 2 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 1 1172.5534 P78527 P78527 3754 3763 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.042161 97.635 By MS/MS 2.5 1.12 1 1 1 1 4 901420 901420 0 4953 1225 5118 11691;11692;11693;11694 9579 9579 1 185210 0 GGEGALQVLPPLVDVIPEAR EFAKELIRHNLVVFRGGEGALQVLPPLVDV LQVLPPLVDVIPEARLNLVIYYLRQDDVQE R G G A R L 2 1 0 1 0 1 2 3 0 1 3 0 0 0 3 0 0 0 0 3 0 0 20 0 2029.1208 A0AVF1 A0AVF1 269 288 TTC26 Intraflagellar transport protein 56 yes yes 2 9.8198E-06 139.49 By MS/MS 6 0 1 1 398050 398050 0 4954 5 5119 11695 9580 9580 1 2736.3 0 GGEIQPVSVK LQATVVAVGSGSKGKGGEIQPVSVKVGDKV GSKGKGGEIQPVSVKVGDKVLLPEYGGTKV K G G V K V 0 0 0 0 0 1 1 2 0 1 0 1 0 0 1 1 0 0 0 2 0 0 10 0 1012.5553 P61604 P61604 57 66 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.00061223 131.12 By MS/MS By matching 10 0 2 1 1 2967700 2932300 35409 4955 1126 5120 11696;11697 9581 9581 1 158040 45333 GGEVLDSSHDDIKLEK SMQQQVNQQIPQEKRGGEVLDSSHDDIKLE GEVLDSSHDDIKLEKSNILLLGPTGSGKTL R G G E K S 0 0 0 3 0 0 2 2 1 1 2 2 0 0 0 2 0 0 0 1 0 0 16 1 1740.853 O76031 O76031 271 286 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 3 0.023685 70.529 By MS/MS 5.5 0.5 1 1 2 5719800 5719800 0 4956 360 5121 11698;11699 9582 9582 1 55073 0 GGGAFVQNSQPVAVR GQHPAASPTHPSAIRGGGAFVQNSQPVAVR GGGAFVQNSQPVAVRGGGGKQV________ R G G V R G 2 1 1 0 0 2 0 3 0 0 0 0 0 1 1 1 0 0 0 3 0 0 15 0 1485.7688 P33176 P33176 942 956 KIF5B Kinesin-1 heavy chain yes yes 2 9.7787E-17 262.07 By MS/MS 4.5 0.5 1 1 2 9222000 9222000 0 4957 800 5122 11700;11701 9583 9583 1 827830 0 GGGALSAVAATK DVASVIVTKLDGHAKGGGALSAVAATKSPI HAKGGGALSAVAATKSPIIFIGTGEHIDDF K G G T K S 4 0 0 0 0 0 0 3 0 0 1 1 0 0 0 1 1 0 0 1 0 0 12 0 1001.5506 P61011 P61011 256 267 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.00013315 154.84 By MS/MS 6 0 1 1 7076600 7076600 0 4958 1104 5123 11702 9584 9584 1 48646 0 GGGGGGFR ______________________________ SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR R G G F R G 0 1 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 663.30887 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 13 20 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 2 0.014018 106.29 By MS/MS By MS/MS 5.4 3.35 1 2 1 1 1 1 1 2 5 5 3131800 2210400 921430 + 4959 55 5124 11703;11704;11705;11706;11707;11708;11709;11710;11711;11712 9585;9586;9587;9588 9588 4 218180 1133400 GGGGGGFRGFSSGSAVVSGGSR ______________________________ RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G G S R R 1 2 0 0 0 0 0 10 0 0 0 0 0 2 0 5 0 0 0 2 0 0 22 1 1898.8983 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 13 34 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 1.3005E-05 128.01 By MS/MS 3 0 1 1 769310 0 769310 + 4960 55 5125 11713 9589;9590 9590 2 0 97921 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR SVSTSHTTISGGGSRGGGGGGYGSGGSSYG GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG R G G G R G 0 1 0 0 0 0 0 21 0 0 0 0 0 0 0 6 0 0 3 0 0 0 31 0 2382.9446 CON__P04264;P04264 P04264 519 549 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 7.3382E-43 252.18 By MS/MS By MS/MS 5.18 2.99 4 4 4 5 3 2 2 3 3 4 11 23 97391000 35542000 61849000 + 4961 471;45 5126 11714;11715;11716;11717;11718;11719;11720;11721;11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733;11734;11735;11736;11737;11738;11739;11740;11741;11742;11743;11744;11745;11746;11747 9591;9592;9593;9594;9595;9596;9597;9598;9599;9600;9601;9602;9603;9604;9605;9606;9607;9608;9609;9610;9611;9612;9613;9614;9615;9616;9617;9618;9619;9620;9621;9622;9623;9624;9625;9626;9627;9628;9629;9630;9631;9632;9633;9634;9635;9636;9637;9638 9613 48 3405700 33260000 GGGGNFGPGPGSNFR SRSGRGGNFGFGDSRGGGGNFGPGPGSNFR GGGGNFGPGPGSNFRGGSDGYGSGRGFGDG R G G F R G 0 1 2 0 0 0 0 7 0 0 0 0 0 2 2 1 0 0 0 0 0 0 15 0 1376.6222 P22626 P22626 214 228 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.024706 80.69 By MS/MS 8 0.816 1 1 1 3 4404100 4404100 0 4962 694 5127 11748;11749;11750 9639 9639 1 67754 0 GGGHVAQIYAIR GKERFAGVDIRVRVKGGGHVAQIYAIRQSI RVKGGGHVAQIYAIRQSISKALVAYYQKYV K G G I R Q 2 1 0 0 0 1 0 3 1 2 0 0 0 0 0 0 0 0 1 1 0 0 12 0 1240.6677 P62249 P62249 74 85 RPS16 40S ribosomal protein S16 yes yes 2;3 0.00095371 138.06 By MS/MS 9.5 0.5 2 2 4 35788000 35788000 0 4963 1145 5128 11751;11752;11753;11754 9640;9641 9640 2 1880500 0 GGGKDVSAQATGK ASEWVQQVSGLMDGKGGGKDVSAQATGKNV GKGGGKDVSAQATGKNVGCLQEALQLATSF K G G G K N 2 0 0 1 0 1 0 4 0 0 0 2 0 0 0 1 1 0 0 1 0 0 13 1 1174.5942 P49588 P49588 931 943 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.00026746 178.46 By MS/MS 4 0 1 1 257560 257560 0 4964 951 5129 11755 9642 9642 1 24238 0 GGGLFLLAGPPASVETLGPR GSEETLLFLTVGDEKGGGLFLLAGPPASVE LLAGPPASVETLGPRVAEVLEGKGAGKKGR K G G P R V 2 1 0 0 0 0 1 5 0 0 4 0 0 1 3 1 1 0 0 1 0 0 20 0 1908.0469 Q9BTE6 Q9BTE6 349 368 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 2 3.9215E-05 119.21 By MS/MS 6 0 1 1 223550 223550 0 4965 2316 5130 11756 9643 9643 1 1536.7 0 GGGLGSPGEGGALPR VLMNFLRGDAGRLARGGGLGSPGEGGALPR GGGLGSPGEGGALPRCRPLQFASQKEVVLY R G G P R C 1 1 0 0 0 0 1 7 0 0 2 0 0 0 2 1 0 0 0 0 0 0 15 0 1280.6473 Q7Z7A3 Q7Z7A3 195 209 CTU1 Cytoplasmic tRNA 2-thiolation protein 1 yes yes 2 0.0011362 120.77 By MS/MS 8 0 1 1 728650 728650 0 4966 1804 5131 11757 9644 9644 1 9199.2 0 GGGPAGAGGEAPAALR LCAVSGPRQAEGGERGGGPAGAGGEAPAAL GGPAGAGGEAPAALRGRLLCDFRRAPFAGR R G G L R G 5 1 0 0 0 0 1 6 0 0 1 0 0 0 2 0 0 0 0 0 0 0 16 0 1307.6582 Q5RKV6 Q5RKV6 78 93 EXOSC6 Exosome complex component MTR3 yes yes 2 0.00041898 167.11 By MS/MS 8 0 1 1 2378500 2378500 0 4967 1617 5132 11758 9645 9645 1 30029 0 GGGQIIPTAR FDVHDVTLHADAIHRGGGQIIPTARRCLYA DAIHRGGGQIIPTARRCLYASVLTAQPRLM R G G A R R 1 1 0 0 0 1 0 3 0 2 0 0 0 0 1 0 1 0 0 0 0 0 10 0 968.54033 P13639;Q15029 P13639 717 726 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 2 0.018295 87.639 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 35484000 35484000 0 4968 602;1476 5133 11759;11760;11761;11762;11763;11764;11765;11766 9646;9647;9648;9649 9647 4 2374900 0 GGGTGGPNHPPAPR REFRSYREFRGDDGRGGGTGGPNHPPAPRG RGGGTGGPNHPPAPRGRTASETRSEGSEYE R G G P R G 1 1 1 0 0 0 0 5 1 0 0 0 0 0 4 0 1 0 0 0 0 0 14 0 1270.6167 P48634 P48634 1067 1080 PRRC2A Protein PRRC2A yes yes 2 0.00041436 132.32 By MS/MS 1.5 0.5 1 1 2 281370 281370 0 4969 938 5134 11767;11768 9650 9650 1 92357 0 GGGVAHGPR TGRARHGSIRSPLWRGGGVAHGPRGPTSYY RSPLWRGGGVAHGPRGPTSYYYMLPMKVRA R G G P R G 1 1 0 0 0 0 0 4 1 0 0 0 0 0 1 0 0 0 0 1 0 0 9 0 806.41473 Q9BYD3 Q9BYD3 148 156 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.013439 94.407 By MS/MS 7 0 1 1 1213600 1213600 0 4970 2370 5135 11769 9651 9651 1 19051 0 GGHDILVR DNKNTHTLLLAGVFRGGHDILVRSRLLLLD LLAGVFRGGHDILVRSRLLLLDTVTMQVTA R G G V R S 0 1 0 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 865.477 Q9Y678 Q9Y678 836 843 COPG1 Coatomer subunit gamma-1 yes yes 2 0.020242 99.375 By MS/MS 4 0 1 1 1903700 1903700 0 4971 2933 5136 11770 9652 9652 1 179150 0 GGHGVPHGK EKHQDQAVTSSAHHRGGHGVPHGKLLKQKS SSAHHRGGHGVPHGKLLKQKSEEPSVSIPF R G G G K L 0 0 0 0 0 0 0 4 2 0 0 1 0 0 1 0 0 0 0 1 0 0 9 0 844.43038 Q5SW79 Q5SW79 432 440 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.024774 86.866 By MS/MS 2.5 0.5 1 1 2 111140 111140 0 4972 1623 5137 11771;11772 9653 9653 1 28987 0 GGHLTIR ______________________________ TLLCKAYRGGHLTIRLALGGCTNRPFYRIV R G G I R L 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 752.42932 Q9Y3D3 Q9Y3D3 14 20 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.01823 114.02 By MS/MS 10 0 1 1 3213200 3213200 0 4973 2871 5138 11773 9654 9654 1 173180 0 GGIGAGLGGGLCR ______________________________ ARGGIGAGLGGGLCRRCSAGLGALAQRPGS R G G C R R 1 1 0 0 1 0 0 7 0 1 2 0 0 0 0 0 0 0 0 0 0 0 13 0 1143.5819 Q9NXV2 Q9NXV2 14 26 KCTD5 BTB/POZ domain-containing protein KCTD5 yes yes 2 0.00088925 128.12 By MS/MS 8 0 1 1 1482300 1482300 0 4974 2629 5139 11774 9655 9655 1 18714 0 GGILITER ETAGDMGKLRQIIQRGGILITERKKADFST LRQIIQRGGILITERKKADFSTKDIYQDLN R G G E R K 0 1 0 0 0 0 1 2 0 2 1 0 0 0 0 0 1 0 0 0 0 0 8 0 857.49707 P43246 P43246 220 227 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.021662 97.798 By MS/MS 3 0.816 1 1 1 3 1510200 1510200 0 4975 894 5140 11775;11776;11777 9656 9656 1 155690 0 GGIVDEGALLR FAQCKKGVRVVNCARGGIVDEGALLRALQS NCARGGIVDEGALLRALQSGQCAGAALDVF R G G L R A 1 1 0 1 0 0 1 3 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1098.6033 O43175 O43175 237 247 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.7617E-05 166.09 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 67789000 67490000 298280 4976 195 5141 11778;11779;11780;11781;11782 9657;9658;9659;9660;9661 9661 5 518970 305650 GGIVGMTLPIAR AFEGQVGQAAYSASKGGIVGMTLPIARDLA ASKGGIVGMTLPIARDLAPIGIRVMTIAPG K G G A R D 1 1 0 0 0 0 0 3 0 2 1 0 1 0 1 0 1 0 0 1 0 0 12 0 1183.6747 Q99714 Q99714 173 184 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 0.00011009 156.35 By MS/MS 8 0 2 2 2339000 2339000 0 4977 2261 5142;5143 11783;11784 9662;9663 9663 1052 2 29529 0 GGKPEPPAMPQPVPTA PKDEILPTTPISEQKGGKPEPPAMPQPVPT GKPEPPAMPQPVPTA_______________ K G G T A - 2 0 0 0 0 1 1 2 0 0 0 1 1 0 6 0 1 0 0 1 0 0 16 1 1572.797 P23396 P23396 228 243 RPS3 40S ribosomal protein S3 yes yes 2 0.017786 106.17 By MS/MS 7.5 0.5 1 1 2 19175000 19175000 0 4978 703 5144 11785;11786 9664 9664 1 245290 0 GGLAGEFQR SAQFLIGDQEPWAFRGGLAGEFQRLLPIDG EPWAFRGGLAGEFQRLLPIDGANDLFFQPP R G G Q R L 1 1 0 0 0 1 1 3 0 0 1 0 0 1 0 0 0 0 0 0 0 0 9 0 933.46683 O60502 O60502 683 691 MGEA5 Protein O-GlcNAcase yes yes 2 0.010114 82.426 By MS/MS 3 0 1 1 1017400 1017400 0 4979 260 5145 11787 9665 9665 1 18615 0 GGLGLILK YIENKEEKTPLQVAKGGLGLILKRMVEG__ TPLQVAKGGLGLILKRMVEG__________ K G G L K R 0 0 0 0 0 0 0 3 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 769.50617 O75832 O75832 214 221 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2 0.012704 107.74 By MS/MS 8 0 1 1 549760 549760 0 4980 350 5146 11788 9666 9666 1 6940.7 0 GGLGLILKR YIENKEEKTPLQVAKGGLGLILKRMVEG__ PLQVAKGGLGLILKRMVEG___________ K G G K R M 0 1 0 0 0 0 0 3 0 1 3 1 0 0 0 0 0 0 0 0 0 0 9 1 925.60729 O75832 O75832 214 222 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2 0.0073145 119.56 By MS/MS 8.5 0.5 1 1 2 986040 986040 0 4981 350 5147 11789;11790 9667 9667 1 13698 0 GGLGYVEETSEFEAR FLRSDLIEVATRLQKGGLGYVEETSEFEAR GGLGYVEETSEFEARVISLEKLKDFGECVI K G G A R V 1 1 0 0 0 0 4 3 0 0 1 0 0 1 0 1 1 0 1 1 0 0 15 0 1642.7475 Q9UIG0 Q9UIG0 1069 1083 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.03528 73.632 By MS/MS 2.5 1.12 1 1 1 1 4 753490 753490 0 4982 2742 5148 11791;11792;11793;11794 9668 9668 1 142870 0 GGLPLDGITELAGR QRLSLGCPVLDALLRGGLPLDGITELAGRS RGGLPLDGITELAGRSSAGKTQLALQLCLA R G G G R S 1 1 0 1 0 0 1 4 0 1 3 0 0 0 1 0 1 0 0 0 0 0 14 0 1367.7409 O43542 O43542 95 108 XRCC3 DNA repair protein XRCC3 yes yes 2 0.0015666 115 By MS/MS 7 0 1 1 115290 115290 0 4983 217 5149 11795 9669 9669 1 1809.9 0 GGLQEVADQLDLQR IYDVKYLMKSCKNLKGGLQEVADQLDLQRI KGGLQEVADQLDLQRIGRQHQAGSDSLLTG K G G Q R I 1 1 0 2 0 3 1 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 14 0 1540.7845 Q9UFF9 Q9UFF9 207 220 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 2 3.4768E-17 267.07 By MS/MS 8 0 1 1 388490 388490 0 4984 2714 5150 11796 9670 9670 1 4904.6 0 GGLQEVAEQLELER IYDVKYLMKSCKNLKGGLQEVAEQLELERI KGGLQEVAEQLELERIGPQHQAGSDSLLTG K G G E R I 1 1 0 0 0 2 4 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 14 0 1569.7999 Q9UIV1 Q9UIV1 207 220 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 2 0.0074939 119.21 By MS/MS 8 0 1 1 284260 284260 0 4985 2744 5151 11797 9671 9671 0 3588.8 0 GGNIGDGGGAADR CVLFFDELDSIAKARGGNIGDGGGAADRVI ARGGNIGDGGGAADRVINQILTEMDGMSTK R G G D R V 2 1 1 2 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 13 0 1115.4956 P55072 P55072 587 599 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.7963E-05 190.66 By MS/MS 4.5 0.5 1 1 2 2958400 2958400 0 4986 1054 5152 11798;11799 9672 9672 1 267730 0 GGNNSFTHEALTLK GPVNALIRSVLLQERGGNNSFTHEALTLKY RGGNNSFTHEALTLKYKLDNQFELVFVVGF R G G L K Y 1 0 2 0 0 0 1 2 1 0 2 1 0 1 0 1 2 0 0 0 0 0 14 0 1487.7369 P08240 P08240 42 55 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0016254 113.95 By MS/MS 5 0 1 1 2204100 2204100 0 4987 522 5153 11800 9673 9673 1 22106 0 GGNPFLFR RFCEDWMQAFLNGAKGGNPFLFRQVLENFK AFLNGAKGGNPFLFRQVLENFKLKAIQDTN K G G F R Q 0 1 1 0 0 0 0 2 0 0 1 0 0 2 1 0 0 0 0 0 0 0 8 0 906.47119 Q9HAS0 Q9HAS0 309 316 C17orf75 Protein Njmu-R1 yes yes 2 0.010102 110.63 By MS/MS 7 0 1 1 480700 480700 0 4988 2492 5154 11801 9674 9674 1 7546.2 0 GGNQTSGIDFFITQER RTYVFRAQSAEMKERGGNQTSGIDFFITQE GNQTSGIDFFITQERIVFLDTQPILSPSIL R G G E R I 0 1 1 1 0 2 1 3 0 2 0 0 0 2 0 1 2 0 0 0 0 0 16 0 1768.838 Q9H0W8 Q9H0W8 249 264 SMG9 Protein SMG9 yes yes 2 4.5851E-11 237.07 By MS/MS 5.5 0.5 1 1 2 1086500 1086500 0 4989 2419 5155 11802;11803 9675;9676;9677 9677 3 8150 0 GGPEVQQVPAGER TAMPFRGYAVLGGERGGPEVQQVPAGERPL ERGGPEVQQVPAGERPLWFICSGMGTQWRG R G G E R P 1 1 0 0 0 2 2 3 0 0 0 0 0 0 2 0 0 0 0 2 0 0 13 0 1322.6579 P49327 P49327 478 490 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00015318 167.84 By MS/MS 2.5 1.12 1 1 1 1 4 1442900 1442900 0 4990 946 5156 11804;11805;11806;11807 9678;9679 9678 2 288740 0 GGPGGELPR ANLGRTTLSTRGPPRGGPGGELPRGPAGLG TRGPPRGGPGGELPRGPAGLGPRRSQQGPR R G G P R G 0 1 0 0 0 0 1 4 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 838.42972 Q04637 Q04637 686 694 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0012944 130.27 By MS/MS 3 1.41 1 1 1 1 1 5 20453000 20453000 0 4991 1291 5157 11808;11809;11810;11811;11812 9680;9681;9682 9681 3 5623700 0 GGPLQALTR QAGITETEWTSGSSKGGPLQALTRESTRGS TSGSSKGGPLQALTRESTRGSRRTPRKRVE K G G T R E 1 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 911.51886 P42167 P42167 240 248 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.0025362 114.5 By MS/MS 6 0 1 1 1937800 1937800 0 4992 876 5158 11813 9683 9683 1 13321 0 GGPNIITLADIVK KKKIKREIKILENLRGGPNIITLADIVKDP LRGGPNIITLADIVKDPVSRTPALVFEHVN R G G V K D 1 0 1 1 0 0 0 2 0 3 1 1 0 0 1 0 1 0 0 1 0 0 13 0 1309.7606 Q8NEV1;P68400 Q8NEV1 90 102 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 2 0.00037513 144.55 By MS/MS 7 0 1 1 161500 161500 0 4993 1213 5159 11814 9684 9684 1 2535.3 0 GGPNIITLADIVKDPVSR KKKIKREIKILENLRGGPNIITLADIVKDP NIITLADIVKDPVSRTPALVFEHVNNTDFK R G G S R T 1 1 1 2 0 0 0 2 0 3 1 1 0 0 2 1 1 0 0 2 0 0 18 1 1864.0418 Q8NEV1;P68400 Q8NEV1 90 107 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 3 0.017606 71.531 By MS/MS 7 0 1 1 121400 121400 0 4994 1213 5160 11815 9685 9685 1 1905.8 0 GGPNYQEGLR QGPLKEHEVTIFVRRGGPNYQEGLRVMGEV IFVRRGGPNYQEGLRVMGEVGKTTGIPIHV R G G L R V 0 1 1 0 0 1 1 3 0 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1089.5203 P53396 P53396 380 389 ACLY ATP-citrate synthase yes yes 2 0.0003484 137.05 By MS/MS 3.5 0.5 1 1 2 25784000 25784000 0 4995 1030 5161 11816;11817 9686 9686 1 2345700 0 GGPPGPPISR IKVQQLMAKGSDKRRGGPPGPPISRGLPLV SDKRRGGPPGPPISRGLPLVDDGGWNTVPI R G G S R G 0 1 0 0 0 0 0 3 0 1 0 0 0 0 4 1 0 0 0 0 0 0 10 0 933.50321 Q04637 Q04637 1033 1042 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.018634 87.476 By MS/MS By matching 3.2 1.17 2 1 1 1 4 1 9002200 8963900 38312 4996 1291 5162 11818;11819;11820;11821;11822 9687;9688;9689;9690;9691 9688 5 2566200 54181 GGPTVDPEELFR GFDPGASGSQHSYWKGGPTVDPEELFRKIF YWKGGPTVDPEELFRKIFGEFSSSSFGDFQ K G G F R K 0 1 0 1 0 0 2 2 0 0 1 0 0 1 2 0 1 0 0 1 0 0 12 0 1315.6408 Q96EY1 Q96EY1 176 187 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.00044855 135.43 By MS/MS 7.86 1.25 1 2 2 1 1 7 12244000 12244000 0 4997 2150 5163 11823;11824;11825;11826;11827;11828;11829 9692;9693;9694;9695 9692 4 190620 0 GGPTVDPEELFRK GFDPGASGSQHSYWKGGPTVDPEELFRKIF WKGGPTVDPEELFRKIFGEFSSSSFGDFQT K G G R K I 0 1 0 1 0 0 2 2 0 0 1 1 0 1 2 0 1 0 0 1 0 0 13 1 1443.7358 Q96EY1 Q96EY1 176 188 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.050834 79.148 By MS/MS 7 0 1 1 1737500 1737500 0 4998 2150 5164 11830 9696 9696 0 27275 0 GGQAEKLGEKER DSMEDEVQRRLQLVRGGQAEKLGEKERSEL LVRGGQAEKLGEKERSELRKRKLLAEVTLK R G G E R S 1 1 0 0 0 1 3 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 12 2 1300.6735 Q9Y285 Q9Y285 145 156 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 3 0.04089 85.672 By MS/MS 6 0 1 1 182450 182450 0 4999 2819 5165 11831 9697 9697 1 1254.2 0 GGQTHLGLPVFNTVK LEYGTKLVGGTTPGKGGQTHLGLPVFNTVK GGQTHLGLPVFNTVKEAKEQTGATASVIYV K G G V K E 0 0 1 0 0 1 0 3 1 0 2 1 0 1 1 0 2 0 0 2 0 0 15 0 1566.8518 P53597 P53597 91 105 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.00017021 165.51 By MS/MS 8 0 1 1 479210 479210 0 5000 1032 5166 11832 9698 9698 1 6050 0 GGRGDVGSADIQDLEK SQLPLKVEFLECSAKGGRGDVGSADIQDLE GRGDVGSADIQDLEKWLAKIA_________ K G G E K W 1 1 0 3 0 1 1 4 0 1 1 1 0 0 0 1 0 0 0 1 0 0 16 1 1615.7802 Q9Y5M8 Q9Y5M8 250 265 SRPRB Signal recognition particle receptor subunit beta yes yes 3 0.021266 102.39 By MS/MS 8.5 0.5 1 1 2 6488100 6488100 0 5001 2917 5167 11833;11834 9699 9699 1 83417 0 GGSDDSSKDPIDVNYEK LDNLLDIEVAYSLLRGGSDDSSKDPIDVNY SDDSSKDPIDVNYEKLKTDIKVVDRDSEEA R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 P09874 P09874 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 7.2643E-71 374.2 By MS/MS By matching 3.6 0.49 2 3 4 1 7951800 7900000 51744 5002 543 5168 11835;11836;11837;11838;11839 9700;9701;9702 9702 3 617260 110250 GGSEGCNIPQNIER LVFSWGDGDFGKLGRGGSEGCNIPQNIERL RGGSEGCNIPQNIERLNGQGVCQIECGAQF R G G E R L 0 1 2 0 1 1 2 3 0 2 0 0 0 0 1 1 0 0 0 0 0 0 14 0 1529.6893 O95714 O95714 3188 3201 HERC2 E3 ubiquitin-protein ligase HERC2 yes yes 2 0.041356 94.538 By MS/MS 1 0 1 1 95495 95495 0 5003 422 5169 11840 9703 9703 1 23011 0 GGSESGEPYIPGVFFR DRSAAMLVLAEKLLKGGSESGEPYIPGVFF GSESGEPYIPGVFFRQFLPVSPKVQFDVVV K G G F R Q 0 1 0 0 0 0 2 4 0 1 0 0 0 2 2 2 0 0 1 1 0 0 16 0 1697.8049 Q9H7H0 Q9H7H0 233 248 METTL17 Methyltransferase-like protein 17, mitochondrial yes yes 2 0.010609 89.403 By MS/MS 7 0 1 1 104710 104710 0 5004 2464 5170 11841 9704;9705 9705 2 1643.7 0 GGSGGGGGGSSGGRGSGGGSSGGSIGGR GHGSYGSGSSSGGYRGGSGGGGGGSSGGRG RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS R G G G R G 0 2 0 0 0 0 0 18 0 1 0 0 0 0 0 7 0 0 0 0 0 0 28 1 2078.9074 CON__P04264;P04264 P04264 589 616 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 7.6236E-41 223.93 By MS/MS By MS/MS 4.96 2.77 3 3 4 4 3 3 2 2 1 3 11 17 27042000 8752200 18289000 + 5005 471;45 5171 11842;11843;11844;11845;11846;11847;11848;11849;11850;11851;11852;11853;11854;11855;11856;11857;11858;11859;11860;11861;11862;11863;11864;11865;11866;11867;11868;11869 9706;9707;9708;9709;9710;9711;9712;9713;9714;9715;9716;9717;9718;9719;9720;9721;9722;9723;9724;9725;9726;9727;9728;9729;9730;9731;9732;9733;9734 9713 28 577300 14783000 GGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVK GHGSYGSGSSSGGYRGGSGGGGGGSSGGRG GGSIGGRGSSSGGVKSSGGSSSVKFVSTTY R G G V K S 0 2 0 0 0 0 0 21 0 1 0 1 0 0 0 10 0 0 0 1 0 0 36 2 2738.2312 CON__P04264;P04264 P04264 589 624 KRT1 Keratin, type II cytoskeletal 1 no no 3 2.8826E-07 79.054 By MS/MS By MS/MS 4 3.61 2 2 1 1 2 4 1344600 139280 1205300 + 5006 471;45 5172 11870;11871;11872;11873;11874;11875 9735;9736;9737;9738;9739 9735 5 40726 1472300 GGSGGGGSISGGGYGSGGGSGGR GSSSYGSGGRQSGSRGGSGGGGSISGGGYG ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R G G G R Y 0 1 0 0 0 0 0 15 0 1 0 0 0 0 0 5 0 0 1 0 0 0 23 0 1740.7412 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 550 572 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 1.5585E-32 244.18 By MS/MS By MS/MS 4.5 2.78 4 2 6 4 2 2 1 1 2 2 9 17 204460000 82933000 121530000 + 5007 55 5173 11876;11877;11878;11879;11880;11881;11882;11883;11884;11885;11886;11887;11888;11889;11890;11891;11892;11893;11894;11895;11896;11897;11898;11899;11900;11901 9740;9741;9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754;9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765;9766;9767;9768;9769;9770;9771;9772;9773 9747 34 5477900 55654000 GGSGGGGSISGGGYGSGGGSGGRYGSGGGSK GSSSYGSGGRQSGSRGGSGGGGSISGGGYG GGGSGGRYGSGGGSKGGSISGGGYGSGGGK R G G S K G 0 1 0 0 0 0 0 19 0 1 0 1 0 0 0 7 0 0 2 0 0 0 31 1 2434.0494 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 550 580 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 2.3731E-06 85.777 By matching By MS/MS 3.5 1.71 1 1 1 1 1 1 2 4 2828900 1037800 1791100 + 5008 55 5174 11902;11903;11904;11905;11906;11907 9774;9775;9776;9777 9777 4 8255 1336100 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG EASGSGGGYGGGSGKSSHS___________ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 0 40 0 3222.2743 P35527;CON__P35527 P35527 580 619 KRT9 Keratin, type I cytoskeletal 9 yes no 3;4 3.4732E-32 197.66 By MS/MS By MS/MS 3.25 1.36 1 3 3 3 1 1 6 6 41738000 31805000 9933400 + 5009 822 5175 11908;11909;11910;11911;11912;11913;11914;11915;11916;11917;11918;11919 9778;9779;9780;9781;9782;9783;9784;9785;9786;9787;9788;9789;9790;9791;9792;9793;9794;9795 9784 17 1868000 4504500 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG SGGGYGGGSGKSSHS_______________ R G G H S - 1 0 0 0 0 0 3 23 2 0 0 1 0 1 0 11 0 0 2 0 0 0 44 1 3620.4293 P35527;CON__P35527 P35527 580 623 KRT9 Keratin, type I cytoskeletal 9 yes no 3;4 2.0884E-10 92.188 By MS/MS By MS/MS 3 1.63 2 2 2 1 1 1 5 4 7215500 5250400 1965100 + 5010 822 5176 11920;11921;11922;11923;11924;11925;11926;11927;11928 9796;9797;9798;9799;9800;9801;9802;9803 9797 8 168330 1873000 GGSGGSYGGGGSGGGYGGGSGSR GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 0 23 0 1790.7204 P35527;CON__P35527 P35527 491 513 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 1.7238E-41 281.68 By MS/MS By MS/MS 4.97 2.87 4 3 3 4 4 3 1 2 2 3 12 17 202520000 122590000 79926000 + 5011 822 5177 11929;11930;11931;11932;11933;11934;11935;11936;11937;11938;11939;11940;11941;11942;11943;11944;11945;11946;11947;11948;11949;11950;11951;11952;11953;11954;11955;11956;11957 9804;9805;9806;9807;9808;9809;9810;9811;9812;9813;9814;9815;9816;9817;9818;9819;9820;9821;9822;9823;9824;9825;9826;9827;9828;9829;9830;9831;9832;9833 9811 30 7615100 67956000 GGSGGSYGR DFESSGAGKIGLGGRGGSGGSYGRGSRGGS IGLGGRGGSGGSYGRGSRGGSGGSYGGGGS R G G G R G 0 1 0 0 0 0 0 5 0 0 0 0 0 0 0 2 0 0 1 0 0 0 9 0 796.34638 P35527;CON__P35527 P35527 479 487 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00075727 141.52 By MS/MS By MS/MS 5.29 3.24 2 2 1 2 1 1 1 2 2 7 7 23229000 10735000 12495000 + 5012 822 5178 11958;11959;11960;11961;11962;11963;11964;11965;11966;11967;11968;11969;11970;11971 9834;9835;9836;9837;9838;9839;9840;9841;9842;9843;9844 9834 11 971890 10624000 GGSGGSYGRGSR DFESSGAGKIGLGGRGGSGGSYGRGSRGGS GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG R G G S R G 0 2 0 0 0 0 0 6 0 0 0 0 0 0 0 3 0 0 1 0 0 0 12 1 1096.501 P35527;CON__P35527 P35527 479 490 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0075779 115.23 By MS/MS By matching 5 3.33 2 1 1 1 1 1 1 1 8 1 7434500 3576600 3857900 + 5013 822 5179 11972;11973;11974;11975;11976;11977;11978;11979;11980 9845;9846 9846 2 243700 3857900 GGSGSGPTIEEVD AGGPGPGGFGAQGPKGGSGSGPTIEEVD__ PKGGSGSGPTIEEVD_______________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 P0DMV9;P0DMV8 P0DMV9 629 641 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.038707 74.376 By MS/MS 5 0 1 1 1897500 1897500 0 5014 550 5180 11981 9847 9847 1 19031 0 GGSGSHNWGTVK SSFSHYSGLKHEDKRGGSGSHNWGTVKDEL DKRGGSGSHNWGTVKDELTESPKYIQKQIS R G G V K D 0 0 1 0 0 0 0 4 1 0 0 1 0 0 0 2 1 1 0 1 0 0 12 0 1185.5527 Q8NC51 Q8NC51 217 228 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.0012043 121.36 By MS/MS 6 0 1 1 1342000 1342000 0 5015 1946 5181 11982 9848 9848 1 9225.5 0 GGSISGGGYGSGGGK GGGSGGRYGSGGGSKGGSISGGGYGSGGGK GGSISGGGYGSGGGKHSSGGGSRGGSSSGG K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 0 15 0 1196.5422 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 581 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.66E-22 241.39 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 80521000 50378000 30143000 + 5016 55 5182 11983;11984;11985;11986;11987;11988;11989;11990;11991;11992;11993;11994;11995;11996;11997;11998;11999;12000;12001;12002 9849;9850;9851;9852;9853;9854;9855;9856;9857;9858;9859;9860;9861;9862;9863;9864;9865;9866;9867 9855 19 3905600 42222000 GGSISGGGYGSGGGKHSSGGGSR GGGSGGRYGSGGGSKGGSISGGGYGSGGGK YGSGGGKHSSGGGSRGGSSSGGGYGSGGGG K G G S R G 0 1 0 0 0 0 0 12 1 1 0 1 0 0 0 6 0 0 1 0 0 0 23 1 1921.8627 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 581 603 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3;4 1.6042E-07 138.98 By MS/MS By MS/MS 4.52 2.63 4 3 4 4 3 3 1 2 2 1 11 16 16480000 5689200 10791000 + 5017 55 5183 12003;12004;12005;12006;12007;12008;12009;12010;12011;12012;12013;12014;12015;12016;12017;12018;12019;12020;12021;12022;12023;12024;12025;12026;12027;12028;12029 9868;9869;9870;9871;9872;9873;9874;9875;9876;9877;9878;9879;9880;9881;9882;9883;9884;9885 9874 18 347600 4839600 GGSRGEEVGELSR VQTGLDLLEILRQEKGGSRGEEVGELSRGK EKGGSRGEEVGELSRGKLYSLGNGRWMLTL K G G S R G 0 2 0 0 0 0 3 4 0 0 1 0 0 0 0 2 0 0 0 1 0 0 13 1 1331.643 P09543 P09543 357 369 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2;3 0.0022554 165.35 By MS/MS 7 0 2 2 4339900 4339900 0 5018 537 5184 12030;12031 9886;9887 9887 2 68128 0 GGSSSGGGYGSGGGGSSSVK YGSGGGKHSSGGGSRGGSSSGGGYGSGGGG GGGYGSGGGGSSSVKGSSGEAFGSSVTFSF R G G V K G 0 0 0 0 0 0 0 10 0 0 0 1 0 0 0 7 0 0 1 1 0 0 20 0 1587.6761 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 604 623 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 1.3785E-40 283.66 By MS/MS By MS/MS 5.36 2.79 2 2 3 2 3 2 2 2 2 2 10 12 121160000 35293000 85871000 + 5019 55 5185 12032;12033;12034;12035;12036;12037;12038;12039;12040;12041;12042;12043;12044;12045;12046;12047;12048;12049;12050;12051;12052;12053 9888;9889;9890;9891;9892;9893;9894;9895;9896;9897;9898;9899;9900;9901;9902;9903;9904;9905;9906;9907;9908;9909;9910;9911 9899 24 2430500 33829000 GGSTTGSQFLEQFK VSMLGKGFGDVGEAKGGSTTGSQFLEQFKT KGGSTTGSQFLEQFKTAQALAQLAAQHSQS K G G F K T 0 0 0 0 0 2 1 3 0 0 1 1 0 2 0 2 2 0 0 0 0 0 14 0 1485.71 Q14157 Q14157 354 367 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 0.038184 86.114 By MS/MS 3 0 1 1 0 0 0 5020 1424 5186 12054 9912 9912 1 0 0 GGSWIQEINVAEK PSFDWKNFEQKMLKKGGSWIQEINVAEKNW KKGGSWIQEINVAEKNWYPRQKICYAKRKL K G G E K N 1 0 1 0 0 1 2 2 0 2 0 1 0 0 0 1 0 1 0 1 0 0 13 0 1429.7201 P78527 P78527 4024 4036 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.012151 107.97 By MS/MS 2.5 1.5 1 1 2 628400 628400 0 5021 1225 5187 12055;12056 9913;9914 9913 2 59137 0 GGTLFGGEVCK INLASKNKLASTPFKGGTLFGGEVCKVIKK TPFKGGTLFGGEVCKVIKKRGNKH______ K G G C K V 0 0 0 0 1 0 1 4 0 0 1 1 0 1 0 0 1 0 0 1 0 0 11 0 1123.5332 P42166 P42166 675 685 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.038126 76.17 By MS/MS 5 0 1 1 712810 712810 0 5022 875 5188 12057 9915 9915 1 7149.1 0 GGTLLSVTGEVEPR PTPRGLLGDAPNDPRGGTLLSVTGEVEPRG RGGTLLSVTGEVEPRGYLGPPHQGPPMHHV R G G P R G 0 1 0 0 0 0 2 3 0 0 2 0 0 0 1 1 2 0 0 2 0 0 14 0 1413.7464 P33240;Q9H0L4 P33240 331 344 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant yes no 2 2.3305E-05 196.16 By MS/MS 5 0 1 1 1786000 1786000 0 5023 801 5189 12058 9916 9916 1 17912 0 GGVAEACPNIR EVSLRNCAVSCAGEKGGVAEACPNIRKVDL AGEKGGVAEACPNIRKVDLSKNLLSSWDEV K G G I R K 2 1 1 0 1 0 1 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 11 0 1142.5502 Q15813 Q15813 146 156 TBCE Tubulin-specific chaperone E yes yes 2 0.0043929 105.52 By MS/MS 5.5 0.5 1 1 2 889170 889170 0 5024 1535 5190 12059;12060 9917 9917 1 6840.4 0 GGVEEGPTVLR TIGIIGAPFSKGQPRGGVEEGPTVLRKAGL GQPRGGVEEGPTVLRKAGLLEKLKEQECDV R G G L R K 0 1 0 0 0 0 2 3 0 0 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1112.5826 P05089 P05089 22 32 ARG1 Arginase-1 yes yes 2 0.00036886 153.24 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 2509100 0 2509100 5025 484 5191 12061;12062;12063;12064;12065;12066;12067;12068;12069;12070 9918;9919;9920;9921;9922;9923;9924;9925;9926;9927;9928 9921 11 0 2405600 GGVEEGPTVLRK TIGIIGAPFSKGQPRGGVEEGPTVLRKAGL QPRGGVEEGPTVLRKAGLLEKLKEQECDVK R G G R K A 0 1 0 0 0 0 2 3 0 0 1 1 0 0 1 0 1 0 0 2 0 0 12 1 1240.6776 P05089 P05089 22 33 ARG1 Arginase-1 yes yes 2 0.0067481 131.62 By MS/MS 3.5 0.5 1 1 2 403740 0 403740 5026 484 5192 12071;12072 9929;9930 9929 2 0 329270 GGVPLVK EEEEDNEGGEWERVRGGVPLVKEKPKMFAK GGEWERVRGGVPLVKEKPKMFAKGTEITHA R G G V K E 0 0 0 0 0 0 0 2 0 0 1 1 0 0 1 0 0 0 0 2 0 0 7 0 668.42211 Q99613;B5ME19 Q99613 306 312 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.016225 119.23 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 12304000 12255000 48566 5027 2252 5193 12073;12074;12075;12076;12077 9931;9932 9932 2 977420 103480 GGVVLKEDALPGQK LNDSATEVTGHRWLKGGVVLKEDALPGQKT KGGVVLKEDALPGQKTEFKVDSDDQWGEYS K G G Q K T 1 0 0 1 0 1 1 3 0 0 2 2 0 0 1 0 0 0 0 2 0 0 14 1 1409.7878 P35613 P35613 174 187 BSG Basigin yes yes 2;3 0.022562 105.2 By MS/MS 7.2 0.748 1 2 2 5 9075200 9075200 0 5028 828 5194 12078;12079;12080;12081;12082 9933;9934 9934 2 125380 0 GGYDLLVR ENKNSHSLYLAGIFRGGYDLLVRSRLALAD YLAGIFRGGYDLLVRSRLALADGVTMQVTV R G G V R S 0 1 0 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 1 0 0 8 0 891.48142 Q9UBF2 Q9UBF2 833 840 COPG2 Coatomer subunit gamma-2 yes yes 2 0.020242 99.375 By MS/MS 4.5 0.5 1 1 2 4872600 4872600 0 5029 2697 5195 12083;12084 9935 9935 1 438620 0 GGYIGSTYFER NNRRLFEQNVQRSMRGGYIGSTYFERCLK_ RSMRGGYIGSTYFERCLK____________ R G G E R C 0 1 0 0 0 0 1 3 0 1 0 0 0 1 0 1 1 0 2 0 0 0 11 0 1248.5775 P61081 P61081 170 180 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 2.4361E-05 159.79 By MS/MS 9.5 0.5 1 1 2 3210700 3210700 0 5030 1108 5196 12085;12086 9936;9937 9936 2 71882 0 GGYRQQQSQTAY DQKDGYRKNEGYMRRGGYRQQQSQTAY___ MRRGGYRQQQSQTAY_______________ R G G A Y - 1 1 0 0 0 4 0 2 0 0 0 0 0 0 0 1 1 0 2 0 0 0 12 1 1385.6324 Q99613;B5ME19 Q99613 902 913 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.043871 92.239 By MS/MS 10 0 1 1 288020 288020 0 5031 2252 5197 12087 9938 9938 1 15523 0 GHAGLGR G H G R 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 666.35616 REV__Q8N436 yes yes 2 0.0084479 141.48 By MS/MS 3.33 0.471 2 1 3 274420 274420 0 + 5032 2974 5198 12088;12089;12090 9939 9939 1 11942 0 GHAVGDIPGVR IEENDEVLVAGFGRKGHAVGDIPGVRFKVV FGRKGHAVGDIPGVRFKVVKVANVSLLALY K G H V R F 1 1 0 1 0 0 0 3 1 1 0 0 0 0 1 0 0 0 0 2 0 0 11 0 1076.5727 P62266 P62266 109 119 RPS23 40S ribosomal protein S23 yes yes 2 0.0066936 99.442 By MS/MS 9.5 0.5 1 1 2 6222200 6222200 0 5033 1148 5199 12091;12092 9940;9941 9941 2 242200 0 GHDEREHPFLVK TVMASLRRPKRIIIRGHDEREHPFLVKGGE IIRGHDEREHPFLVKGGEDLRQDQRVEQLF R G H V K G 0 1 0 1 0 0 2 1 2 0 1 1 0 1 1 0 0 0 0 1 0 0 12 1 1462.7317 P78527 P78527 3742 3753 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.013905 84.198 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 2789100 2789100 0 5034 1225 5200 12093;12094;12095;12096;12097;12098 9942;9943 9942 2 418080 0 GHEDLRQDER TLMGSNGHEFVFLLKGHEDLRQDERVMQLF VFLLKGHEDLRQDERVMQLFGLVNTLLAND K G H E R V 0 2 0 2 0 1 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 10 1 1253.5749 P42345 P42345 2188 2197 MTOR Serine/threonine-protein kinase mTOR yes yes 3 0.050434 64.04 By MS/MS 2 0 1 1 292910 292910 0 5035 879 5201 12099 9944 9944 1 99074 0 GHEVTLVSR TGFIGTALTQLLNARGHEVTLVSRKPGPGR QLLNARGHEVTLVSRKPGPGRITWDELAAS R G H S R K 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 996.53524 Q9NRG7 Q9NRG7 24 32 SDR39U1 Epimerase family protein SDR39U1 yes yes 2 0.0015503 127.02 By MS/MS 8 0 1 1 523790 523790 0 5036 2552 5202 12100 9945 9945 1 6612.8 0 GHFFVEDQIYCEK ECYVCTDCGTNLKQKGHFFVEDQIYCEKHA QKGHFFVEDQIYCEKHARERVTPPEGYEVV K G H E K H 0 0 0 1 1 1 2 1 1 1 0 1 0 2 0 0 0 0 1 1 0 0 13 0 1670.7399 O00151 O00151 297 309 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.038397 75.819 By MS/MS 7 0 1 1 853250 853250 0 5037 84 5203 12101 9946 9946 0 13395 0 GHFGPIHCVR YKYDYNSGEELESYKGHFGPIHCVRFSPDG LESYKGHFGPIHCVRFSPDGELYASGSEDG K G H V R F 0 1 0 0 1 0 0 2 2 1 0 0 0 1 1 0 0 0 0 1 0 0 10 0 1178.5767 Q9Y3F4 Q9Y3F4 263 272 STRAP Serine-threonine kinase receptor-associated protein yes yes 3 0.037662 78.113 By MS/MS 7 0 1 1 414140 414140 0 5038 2877 5204 12102 9947 9947 1 6501.3 0 GHFGPINSVAFHPDGK RFFHLAFEEEFGRVKGHFGPINSVAFHPDG HFGPINSVAFHPDGKSYSSGGEDGYVRIHY K G H G K S 1 0 1 1 0 0 0 3 2 1 0 1 0 2 2 1 0 0 0 1 0 0 16 0 1678.8216 Q13347 Q13347 283 298 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.0073386 99.539 By MS/MS 7.5 0.5 1 1 2 1725800 1725800 0 5039 1372 5205 12103;12104 9948 9948 1 26196 0 GHGIPFQDGHSCLR PVLPVTATEIRQYLRGHGIPFQDGHSCLRA RGHGIPFQDGHSCLRALSPFAESSQLKGQT R G H L R A 0 1 0 1 1 1 0 3 2 1 1 0 0 1 1 1 0 0 0 0 0 0 14 0 1579.7314 Q96RR1 Q96RR1 66 79 PEO1 Twinkle protein, mitochondrial yes yes 3 0.01884 83.243 By MS/MS 5 0 1 1 710520 710520 0 5040 2225 5206 12105 9949 9949 1 7126.1 0 GHLENNPALEK VVLMGKNTMMRKAIRGHLENNPALEKLLPH KAIRGHLENNPALEKLLPHIRGNVGFVFTK R G H E K L 1 0 2 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 11 0 1220.6149 P05388;Q8NHW5 P05388 67 77 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2 0.0079094 96.229 By MS/MS By matching 7.33 0.471 2 1 2 1 5629700 5569100 60661 5041 491 5207 12106;12107;12108 9950 9950 1 86254 109250 GHNQPCLLVGSGR LAIGAKTYKMRYGNRGHNQPCLLVGSGRCF NRGHNQPCLLVGSGRCFLTSQNHGFAVETD R G H G R C 0 1 1 0 1 1 0 3 1 0 2 0 0 0 1 1 0 0 0 1 0 0 13 0 1393.6885 P27708 P27708 275 287 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.008723 92.538 By MS/MS 1.5 0.5 1 1 2 372700 372700 0 5042 745 5208 12109;12110 9951 9951 1 120370 0 GHQAFDVGQPR QLRACPPGTAACLVRGHQAFDVGQPRDGLK CLVRGHQAFDVGQPRDGLKLVRKDRLVLSY R G H P R D 1 1 0 1 0 2 0 2 1 0 0 0 0 1 1 0 0 0 0 1 0 0 11 0 1210.5843 P11717 P11717 239 249 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.011121 101.38 By MS/MS 2 0 1 1 0 0 0 5043 583 5209 12111 9952 9952 1 0 0 GHQQLYWSHPR ______________________________ ______________________________ M G H P R K 0 1 0 0 0 2 0 1 2 0 1 0 0 0 1 1 0 1 1 0 0 0 11 0 1407.6796 P62273 P62273 2 12 RPS29 40S ribosomal protein S29 yes yes 3 0.0026594 108.9 By MS/MS 10 0 1 1 2203500 2203500 0 5044 1150 5210 12112 9953 9953 1 118760 0 GHRLSPADDELYQR SLRCPPVELPWAPRRGHRLSPADDELYQRT RGHRLSPADDELYQRTRISLLQREAAQAMY R G H Q R T 1 2 0 2 0 1 1 1 1 0 2 0 0 0 1 1 0 0 1 0 0 0 14 1 1655.8016 Q9BU61 Q9BU61 31 44 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 3 0.00028287 160.87 By MS/MS 10 0 2 2 733670 733670 0 5045 2321 5211 12113;12114 9954;9955 9954 2 39542 0 GHSAAVHSFAFSNDSR KKGEFQEVVRAFELKGHSAAVHSFAFSNDS HSAAVHSFAFSNDSRRMASVSKDGTWKLWD K G H S R R 3 1 1 1 0 0 0 1 2 0 0 0 0 2 0 4 0 0 0 1 0 0 16 0 1688.7655 Q9Y4P3 Q9Y4P3 277 292 TBL2 Transducin beta-like protein 2 yes yes 3 0.011542 87.363 By MS/MS 7 0 1 1 756270 756270 0 5046 2899 5212 12115 9956 9956 1 11872 0 GHSCYRPR QGVLTHGRVRLLLSKGHSCYRPRRTGERKR VRLLLSKGHSCYRPRRTGERKRKSVRGCIV K G H P R R 0 2 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 1031.4719 P62753 P62753 80 87 RPS6 40S ribosomal protein S6 yes yes 2 0.016119 129.4 By MS/MS 8 0.816 1 1 1 3 5024600 5024600 0 5047 1169 5213 12116;12117;12118 9957 9957 1 63912 0 GHSEKEVADAIR HVSWDEYKVKFLASKGHSEKEVADAIRLNE ASKGHSEKEVADAIRLNEELKVDEETQEVL K G H I R L 2 1 0 1 0 0 2 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 12 1 1310.6579 Q9BRK5 Q9BRK5 171 182 SDF4 45 kDa calcium-binding protein yes yes 3 0.036395 67.252 By MS/MS 6.5 0.5 1 1 2 3570200 3570200 0 5048 2296 5214 12119;12120 9958 9958 1 33734 0 GHVELSEAR VLCAHGGRMFLKDLRGHVELSEARLRDVLQ FLKDLRGHVELSEARLRDVLQRAGPERFLL R G H A R L 1 1 0 0 0 0 2 1 1 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 996.49886 Q96H79 Q96H79 28 36 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 2 0.012153 112.41 By MS/MS 7.5 0.5 1 1 2 2126000 2126000 0 5049 2163 5215 12121;12122 9959 9959 1 28600 0 GHVFEESQVAGTPMFVVK EQVVGGIYGVLNRKRGHVFEESQVAGTPMF FEESQVAGTPMFVVKAYLPVNESFGFTADL R G H V K A 1 0 0 0 0 1 2 2 1 0 0 1 1 2 1 1 1 0 0 4 0 0 18 0 1960.9717 P13639 P13639 768 785 EEF2 Elongation factor 2 yes yes 2;3 8.8772E-17 250.05 By MS/MS 4.4 0.49 3 2 5 7906300 7906300 0 5050 602 5216;5217 12123;12124;12125;12126;12127 9960;9961;9962 9960 284 3 628400 0 GHVQPIR MTKKRRNNGRAKKGRGHVQPIRCTNCARCV NGRAKKGRGHVQPIRCTNCARCVPKDKAIK R G H I R C 0 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 1 0 0 7 0 805.45587 P62854;Q5JNZ5 P62854 16 22 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.027921 106.29 By MS/MS By matching 10 0 2 1 1 26156000 26015000 140430 5051 1177 5218 12128;12129 9963 9963 1 1402100 179790 GHVSHGHGR ______________________________ KTRKLRGHVSHGHGRIGKHRKHPGGRGNAG R G H G R I 0 1 0 0 0 0 0 3 3 0 0 0 0 0 0 1 0 0 0 1 0 0 9 0 942.45324 P46776 P46776 13 21 RPL27A 60S ribosomal protein L27a yes yes 2 7.3172E-09 203.19 By MS/MS 9.5 0.5 1 1 2 199140 199140 0 5052 914 5219 12130;12131 9964 9964 1 4294 0 GHVTQDAPIPGSPLYTIK ADCVSAVYTVLARRRGHVTQDAPIPGSPLY TQDAPIPGSPLYTIKAFIPAIDSFGFETDL R G H I K A 1 0 0 1 0 1 0 2 1 2 1 1 0 0 3 1 2 0 1 1 0 0 18 0 1892.9996 Q15029 Q15029 855 872 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00017594 140.49 By MS/MS 4 0 1 1 887690 887690 0 5053 1476 5220 12132 9965 9965 1 83537 0 GHYTEGAELVDSVLDVVR NFVFGQSGAGNNWAKGHYTEGAELVDSVLD TEGAELVDSVLDVVRKEAESCDCLQGFQLT K G H V R K 1 1 0 2 0 0 2 2 1 0 2 0 0 0 0 1 1 0 1 4 0 0 18 0 1957.9745 P68371;P07437;Q13509;Q13885;Q9BVA1 P68371 104 121 TUBB4B;TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2;3 3.245E-57 346.65 By MS/MS 6 0 4 4 12831000 12831000 0 5054 1212;509;1412;2331;1393 5221 12133;12134;12135;12136 9966;9967;9968;9969 9969 4 88206 0 GHYTEGAELVDSVLDVVRK NFVFGQSGAGNNWAKGHYTEGAELVDSVLD EGAELVDSVLDVVRKEAESCDCLQGFQLTH K G H R K E 1 1 0 2 0 0 2 2 1 0 2 1 0 0 0 1 1 0 1 4 0 0 19 1 2086.0695 P68371;P07437;Q13509;Q13885;Q9BVA1 P68371 104 122 TUBB4B;TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 3;4 8.8243E-06 197.15 By MS/MS 6 0 3 3 16078000 16078000 0 5055 1212;509;1412;2331;1393 5222 12137;12138;12139 9970;9971;9972 9970 3 110520 0 GHYTIGK QLITGKEDAANNYARGHYTIGKEIIDLVLD DAANNYARGHYTIGKEIIDLVLDRIRKLAD R G H G K E 0 0 0 0 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 774.40244 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 106 112 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2 0.016101 119.56 By MS/MS 8.25 1.48 1 1 1 1 4 83339000 83339000 0 5056 1210;1751;2290;1211 5223 12140;12141;12142;12143 9973;9974 9974 2 620920 0 GIAADGANALLPANR FKEGKYERAIECYTRGIAADGANALLPANR GIAADGANALLPANRAMAYLKIQKYEEAEK R G I N R A 5 1 2 1 0 0 0 2 0 1 2 0 0 0 1 0 0 0 0 0 0 0 15 0 1422.7579 Q9H6T3 Q9H6T3 308 322 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.00119 119.74 By MS/MS 6 0.816 1 1 1 3 5103300 5103300 0 5057 2459 5224 12144;12145;12146 9975 9975 1 49805 0 GIALWGGEK RWSPKGTYLATFHQRGIALWGGEKFKQIQR ATFHQRGIALWGGEKFKQIQRFSHQGVQLI R G I E K F 1 0 0 0 0 0 1 3 0 1 1 1 0 0 0 0 0 1 0 0 0 0 9 0 929.49707 P55884 P55884 356 364 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.007329 105.14 By MS/MS 4 2 1 1 1 1 1 1 1 7 19655000 19655000 0 5058 1065 5225 12147;12148;12149;12150;12151;12152;12153 9976;9977;9978 9976 3 1332900 0 GICDYFPSPSK FKAFSTREDAEKFARGICDYFPSPSKTSLP KFARGICDYFPSPSKTSLPLSPVKTAPLFS R G I S K T 0 0 0 1 1 0 0 1 0 1 0 1 0 1 2 2 0 0 1 0 0 0 11 0 1269.57 Q86XL3 Q86XL3 252 262 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.029337 80.763 By MS/MS 4.5 0.5 1 1 2 1434400 1434400 0 5059 1845 5226 12154;12155 9979 9979 1 113380 0 GIDPFSLDALSK VCGDSDKGFVVINQKGIDPFSLDALSKEGI NQKGIDPFSLDALSKEGIVALRRAKRRNME K G I S K E 1 0 0 2 0 0 0 1 0 1 2 1 0 1 1 2 0 0 0 0 0 0 12 0 1261.6554 P40227 P40227 296 307 CCT6A T-complex protein 1 subunit zeta yes yes 2 4.5104E-06 185.96 By MS/MS 5.58 2.43 1 1 1 1 4 2 1 1 12 127220000 127220000 0 5060 858 5227 12156;12157;12158;12159;12160;12161;12162;12163;12164;12165;12166;12167 9980;9981;9982;9983;9984;9985;9986;9987;9988;9989;9990 9983 11 957810 0 GIDRYNPENLATLER AMFEQMRANVGKLLKGIDRYNPENLATLER GIDRYNPENLATLERYVETQAKENAYDLEA K G I E R Y 1 2 2 1 0 0 2 1 0 1 2 0 0 0 1 0 1 0 1 0 0 0 15 1 1759.8853 Q9UBQ5 Q9UBQ5 17 31 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2;3 0.0002547 192.4 By MS/MS 8.5 0.5 2 2 4 41785000 41785000 0 5061 2703 5228 12168;12169;12170;12171 9991;9992;9993;9994 9994 4 729860 0 GIEAVGGK SSLTTKGASSFKITRGIEAVGGKLSVTATR SSFKITRGIEAVGGKLSVTATRENMAYTVE R G I G K L 1 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 0 0 0 1 0 0 8 0 729.4021 P22695 P22695 102 109 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.018156 101.69 By MS/MS By matching 6.33 0.471 2 1 2 1 2057300 2017800 39566 5062 696 5229 12172;12173;12174 9995 9995 1 29227 40543 GIEILTDMSRPVELSDR HPTIISESFQKALEKGIEILTDMSRPVELS EILTDMSRPVELSDRETLLNSATTSLNSKV K G I D R E 0 2 0 2 0 0 2 1 0 2 2 0 1 0 1 2 1 0 0 1 0 0 17 1 1929.983 P50991 P50991 144 160 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0026299 160.86 By MS/MS 6 0 2 2 5130600 5130600 0 5063 985 5230;5231 12175;12176 9996;9997 9997 540 2 35269 0 GIEQAVQSHAVAEEEAR DNFTLDINTAYARLRGIEQAVQSHAVAEEE EQAVQSHAVAEEEARKAHQLWLSVEALKYS R G I A R K 4 1 0 0 0 2 4 1 1 1 0 0 0 0 0 1 0 0 0 2 0 0 17 0 1822.881 Q16891 Q16891 548 564 IMMT MICOS complex subunit MIC60 yes yes 2;3 0.00013956 167.92 By MS/MS 4 0 2 2 3628200 3628200 0 5064 1563 5232 12177;12178 9998;9999 9999 2 341440 0 GIFTSEIGTK LAKLYRSIGEYDVLRGIFTSEIGTKQITQS YDVLRGIFTSEIGTKQITQSALLAEARSDY R G I T K Q 0 0 0 0 0 0 1 2 0 2 0 1 0 1 0 1 2 0 0 0 0 0 10 0 1051.555 P78527 P78527 2941 2950 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.7671E-05 169.44 By MS/MS 2 0.816 1 1 1 3 8045200 8045200 0 5065 1225 5233 12179;12180;12181 10000;10001;10002 10002 3 1764700 0 GIGDCVR TQLQLDERSHPPRYRGIGDCVRQTVRSHGV RSHPPRYRGIGDCVRQTVRSHGVLGLYRGL R G I V R Q 0 1 0 1 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 7 0 775.36467 P53007 P53007 66 72 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.016696 118.01 By MS/MS By matching 8 0 2 1 1 10081000 10033000 47628 5066 1026 5234 12182;12183 10003 10003 1 126670 64271 GIGDPLVSVYAR TGISECLPRLTCMIRGIGDPLVSVYARAYL MIRGIGDPLVSVYARAYLCRVGMEVAPHLK R G I A R A 1 1 0 1 0 0 0 2 0 1 1 0 0 0 1 1 0 0 1 2 0 0 12 0 1245.6717 Q7Z3J2 Q7Z3J2 325 336 C16orf62 UPF0505 protein C16orf62 yes yes 2 0.0008786 127.42 By MS/MS 4 0 1 1 877660 877660 0 5067 1784 5235 12184 10004 10004 1 82594 0 GIGELVSEEPFVVK LCTCDRRKAQWYLDKGIGELVSEEPFVVKL KGIGELVSEEPFVVKLRFEPAGRPESPGDY K G I V K L 0 0 0 0 0 0 3 2 0 1 1 1 0 1 1 1 0 0 0 3 0 0 14 0 1501.8028 Q9NVH0 Q9NVH0 383 396 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 7.6369E-06 201.09 By MS/MS 5 0 1 1 740920 740920 0 5068 2594 5236 12185 10005 10005 1 7431 0 GIHPTIISESFQK IAGSLLDSCTKLLQKGIHPTIISESFQKAL QKGIHPTIISESFQKALEKGIEILTDMSRP K G I Q K A 0 0 0 0 0 1 1 1 1 3 0 1 0 1 1 2 1 0 0 0 0 0 13 0 1455.7722 P50991 P50991 127 139 CCT4 T-complex protein 1 subunit delta yes yes 2;3 1.995E-05 192.12 By MS/MS 7 1.78 1 2 2 2 2 2 1 12 148950000 148950000 0 5069 985 5237 12186;12187;12188;12189;12190;12191;12192;12193;12194;12195;12196;12197 10006;10007;10008;10009;10010;10011;10012 10011 7 1178700 0 GIIDCVVR VQHASKQITADKQYKGIIDCVVRIPKEQGV TADKQYKGIIDCVVRIPKEQGVLSFWRGNL K G I V R I 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 2 0 0 8 0 930.49569 P05141;P12235 P05141 53 60 SLC25A5;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1 no no 2 0.0051105 134.06 By MS/MS 6.33 3.09 1 1 1 3 7992300 7992300 0 5070 487;588 5238 12198;12199;12200 10013;10014 10013 2 298050 0 GIIDSTVSDQR VLARSSPTDKHTLVKGIIDSTVSDQRQVVA TLVKGIIDSTVSDQRQVVAVTGDGTNDGPA K G I Q R Q 0 1 0 2 0 1 0 1 0 2 0 0 0 0 0 2 1 0 0 1 0 0 11 0 1189.5939 P20020 P20020 779 789 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 7.0716E-06 175.93 By MS/MS 2 0.816 1 1 1 3 1227400 1227400 0 5071 667 5239 12201;12202;12203 10015 10015 1 209320 0 GIILFISR LQLALNFTAHMAYRKGIILFISRNRQFSYL AHMAYRKGIILFISRNRQFSYLIENMARDC K G I S R N 0 1 0 0 0 0 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 8 0 917.56984 Q9Y399 Q9Y399 140 147 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0073118 114.78 By MS/MS 8 0 1 1 295370 295370 0 5072 2860 5240 12204 10016 10016 1 3729 0 GIISALLLPPETEEAK YPEKEEPKHILNIKRGIISALLLPPETEEA IISALLLPPETEEAKQVLFLDTVYGNCSTD R G I A K Q 2 0 0 0 0 0 3 1 0 2 3 1 0 0 2 1 1 0 0 0 0 0 16 0 1679.9346 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 156 171 yes yes 2 0.0010044 119.76 By MS/MS 6.75 1.48 1 1 1 1 4 533860 533860 0 + 5073 33 5241 12205;12206;12207;12208 10017;10018;10019 10017 3 5975.9 0 GIKEEVQLTSK QIIELELKEEIKKKKGIKEEVQLTSKQKEM KKKKGIKEEVQLTSKQKEMLQAQLDREAQV K G I S K Q 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 1 1 0 0 1 0 0 11 1 1230.682 Q92616 Q92616 819 829 GCN1L1 Translational activator GCN1 yes yes 2;3 0.00033035 131.12 By MS/MS 2.2 0.748 1 2 2 5 3536100 3536100 0 5074 2064 5242 12209;12210;12211;12212;12213 10020;10021;10022 10021 3 925760 0 GILAADESTGSIAK KELSDIAHRIVAPGKGILAADESTGSIAKR KGILAADESTGSIAKRLQSIGTENTEENRR K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 P04075 P04075 29 42 ALDOA Fructose-bisphosphate aldolase A yes yes 2 8.4518E-05 180.19 By MS/MS 7 0 1 1 10485000 10485000 0 5075 467 5243 12214 10023 10023 1 164600 0 GILAADESTGSIAKR KELSDIAHRIVAPGKGILAADESTGSIAKR GILAADESTGSIAKRLQSIGTENTEENRRF K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 P04075 P04075 29 43 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.019369 78.287 By MS/MS 7 0 1 1 2788600 2788600 0 5076 467 5244 12215 10024 10024 1 43776 0 GILADEDSSRPVWLK LPVDDTSFRWVESLKGILADEDSSRPVWLK GILADEDSSRPVWLKAINCATSGVVGLVNC K G I L K A 1 1 0 2 0 0 1 1 0 1 2 1 0 0 1 2 0 1 0 1 0 0 15 1 1684.8784 P49327 P49327 1430 1444 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.031657 66.989 By MS/MS 2 0 1 1 488930 488930 0 5077 946 5245 12216 10025 10025 1 165370 0 GILDVQSVQEK LAEAAERRQKEAASRGILDVQSVQEKRKKK AASRGILDVQSVQEKRKKKEKIEKQIATSG R G I E K R 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1214.6507 Q8NHG7 Q8NHG7 40 50 SVIP Small VCP/p97-interacting protein yes yes 2 0.0007027 127.51 By MS/MS 10 0 1 1 155650 155650 0 5078 1967 5246 12217 10026 10026 1 8388.9 0 GILEGELEGIR VPRGRRAQSALAQLRGILEGELEGIRGAGT AQLRGILEGELEGIRGAGTWKSERVITSRQ R G I I R G 0 1 0 0 0 0 3 3 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1184.6401 O75600 O75600 29 39 GCAT 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes yes 2 0.00078022 125.97 By MS/MS 6 0.816 1 1 1 3 2403700 2403700 0 5079 336 5247 12218;12219;12220 10027 10027 1 30299 0 GILEQGWQADSTTR DFAAFVGLPVEEAVKGILEQGWQADSTTRM KGILEQGWQADSTTRMVLPRKPVAGALDVS K G I T R M 1 1 0 1 0 2 1 2 0 1 1 0 0 0 0 1 2 1 0 0 0 0 14 0 1560.7532 Q99627 Q99627 147 160 COPS8 COP9 signalosome complex subunit 8 yes yes 2 3.2855E-05 193.15 By MS/MS 9 0 1 1 637020 637020 0 5080 2255 5248 12221 10028 10028 1 12537 0 GILFVGSGVSGGEEGAR EYRDTTRRCRDLKAKGILFVGSGVSGGEEG LFVGSGVSGGEEGARYGPSLMPGGNKEAWP K G I A R Y 1 1 0 0 0 0 2 6 0 1 1 0 0 1 0 2 0 0 0 2 0 0 17 0 1590.8002 P52209 P52209 120 136 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 2.0013E-24 283.47 By MS/MS 8 1.41 1 1 1 1 1 5 19372000 19372000 0 5081 1011 5249 12222;12223;12224;12225;12226 10029;10030;10031 10030 3 178160 0 GILIPLCESGTCTLR MALKKALFKPGAWFKGILIPLCESGTCTLR GILIPLCESGTCTLREAIIVGSIITKCSIP K G I L R E 0 1 0 0 2 0 1 2 0 2 3 0 0 0 1 1 2 0 0 0 0 0 15 0 1688.859 Q13895 Q13895 289 303 BYSL Bystin yes yes 2 0.0011023 116.74 By MS/MS 6 0 1 1 3235300 3235300 0 5082 1413 5250 12227 10032 10032 1 22240 0 GILKKGDECELLGHSK SVPGRGTVVTGTLERGILKKGDECELLGHS ILKKGDECELLGHSKNIRTVVTGIEMFHKS R G I S K N 0 0 0 1 1 0 2 3 1 1 3 3 0 0 0 1 0 0 0 0 0 0 16 2 1782.9298 P49411 P49411 282 297 TUFM Elongation factor Tu, mitochondrial yes yes 3;4 0.00033396 144.18 By MS/MS 7 0 2 2 5934000 5934000 0 5083 949 5251 12228;12229 10033;10034 10033 2 93153 0 GILLFGPPGTGK IKFPHLFTGKRTPWRGILLFGPPGTGKSYL PWRGILLFGPPGTGKSYLAKAVATEANNST R G I G K S 0 0 0 0 0 0 0 4 0 1 2 1 0 1 2 0 1 0 0 0 0 0 12 0 1155.6652 Q9UN37;O75351;Q6PIW4 Q9UN37 162 173 VPS4A;VPS4B;FIGNL1 Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1 yes no 2 0.044482 72.243 By MS/MS 6 0.816 1 1 1 3 1363400 1363400 0 5084 2784 5252 12230;12231;12232 10035 10035 1 10840 0 GILLITGR GIFRCWGRDTFIALRGILLITGRYVEARNI DTFIALRGILLITGRYVEARNIILAFAGTL R G I G R Y 0 1 0 0 0 0 0 2 0 2 2 0 0 0 0 0 1 0 0 0 0 0 8 0 841.53854 P35573 P35573 1109 1116 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.037283 87.323 By MS/MS 3 0 1 1 147260 147260 0 5085 823 5253 12233 10036 10036 1 2694.5 0 GILLYGPPGCGK FPPEIVEQMGCKHVKGILLYGPPGCGKTLL HVKGILLYGPPGCGKTLLARQIGKMLNARE K G I G K T 0 0 0 0 1 0 0 4 0 1 2 1 0 0 2 0 0 0 1 0 0 0 12 0 1230.6431 P46459 P46459 255 266 NSF Vesicle-fusing ATPase yes yes 2 0.021408 84.498 By MS/MS 5 0 1 1 3889200 3889200 0 5086 912 5254 12234 10037 10037 1 39007 0 GINSSNVENQLQATQAAR NNQGTVNWSVDDIVKGINSSNVENQLQATQ SSNVENQLQATQAARKLLSREKQPPIDNII K G I A R K 3 1 3 0 0 3 1 1 0 1 1 0 0 0 0 2 1 0 0 1 0 0 18 0 1899.9399 P52292 P52292 84 101 KPNA2 Importin subunit alpha-1 yes yes 2 1.1895E-33 304.03 By MS/MS 8.25 1.48 1 1 1 1 4 13794000 13794000 0 5087 1013 5255 12235;12236;12237;12238 10038;10039 10039 2 122150 0 GINTLVTYDMVPEPK TYFNKPDIDAWELRKGINTLVTYDMVPEPK GINTLVTYDMVPEPKIIDAALRACRRLNDF K G I P K I 0 0 1 1 0 0 1 1 0 1 1 1 1 0 2 0 2 0 1 2 0 0 15 0 1675.8491 P20674 P20674 73 87 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 1.6843E-16 255.24 By MS/MS 10 0 1 1 1218400 1218400 0 5088 673 5256 12239 10040 10040 337 1 65667 0 GIPAPEEERTR FIDKNGETELCMEGRGIPAPEEERTRQGWQ MEGRGIPAPEEERTRQGWQRYYFEGIKQTF R G I T R Q 1 2 0 0 0 0 3 1 0 1 0 0 0 0 2 0 1 0 0 0 0 0 11 1 1253.6364 O95433 O95433 306 316 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 2 0.048367 91.265 By MS/MS 7 0 1 1 520470 520470 0 5089 411 5257 12240 10041 10041 1 8170.5 0 GIPDLYDDAAIFEAK TVAFKDIKLWRKLLKGIPDLYDDAAIFEAK GIPDLYDDAAIFEAKKSFYWARKTSHSFVV K G I A K K 3 0 0 3 0 0 1 1 0 2 1 1 0 1 1 0 0 0 1 0 0 0 15 0 1636.7985 Q14534 Q14534 437 451 SQLE Squalene monooxygenase yes yes 2 0.0011095 121.28 By MS/MS 6 0 1 1 1952100 1952100 0 5090 1442 5258 12241 10042 10042 1 13419 0 GIPELEQYDPPELADSSGR YMYSAQGNGGGPPRKGIPELEQYDPPELAD LEQYDPPELADSSGRVVREKWSADMWRLGC K G I G R V 1 1 0 2 0 1 3 2 0 1 2 0 0 0 3 2 0 0 1 0 0 0 19 0 2071.9698 Q96KG9 Q96KG9 177 195 SCYL1 N-terminal kinase-like protein yes yes 2 0.0001013 144.08 By MS/MS 4 0 1 1 1169100 1169100 0 5091 2188 5259 12242 10043 10043 1 110020 0 GIPHLVTHDAR KYKLCKVRKIFVGTKGIPHLVTHDARTIRY VGTKGIPHLVTHDARTIRYPDPLIKVNDTI K G I A R T 1 1 0 1 0 0 0 1 2 1 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1214.652 P62701;Q8TD47;P22090 P62701 135 145 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.048193 76.17 By MS/MS 8.5 0.5 1 1 2 6630700 6630700 0 5092 1165 5260 12243;12244 10044 10044 0 85960 0 GIPLATGDTSPEPELLPGAPLPPPK EEGEDDKCVTSELLKGIPLATGDTSPEPEL PEPELLPGAPLPPPKEVINGNIKTVTEYKI K G I P K E 2 0 0 1 0 0 2 3 0 1 4 1 0 0 8 1 2 0 0 0 0 0 25 0 2463.3261 O75821 O75821 33 57 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.0011579 85.177 By MS/MS 7 0 1 1 349040 349040 0 5093 348 5261 12245 10045;10046 10045 2 5479.3 0 GIPNMLLSEEETES TLQCPESGRMFPISRGIPNMLLSEEETES_ RGIPNMLLSEEETES_______________ R G I E S - 0 0 1 0 0 0 4 1 0 1 2 0 1 0 1 2 1 0 0 0 0 0 14 0 1547.7025 Q9UI30 Q9UI30 112 125 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 0.00044179 160.36 By MS/MS 10 0 2 2 660560 660560 0 5094 2737 5262;5263 12246;12247 10047;10048;10049 10047 1159 3 35602 0 GIQNQAEPR EAQGELQHASAVLQRGIQNQAEPREFLQQQ SAVLQRGIQNQAEPREFLQQQYRLFQTRLT R G I P R E 1 1 1 0 0 2 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 0 1011.5098 O43683 O43683 125 133 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.02101 88.496 By MS/MS 3 0 1 1 427750 427750 0 5095 227 5264 12248 10050 10050 1 7826.7 0 GISDLAQHYLMR EDIIQLKPDVVITEKGISDLAQHYLMRANI TEKGISDLAQHYLMRANITAIRRVRKTDNN K G I M R A 1 1 0 1 0 1 0 1 1 1 2 0 1 0 0 1 0 0 1 0 0 0 12 0 1402.7027 P49368 P49368 295 306 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00034691 123.51 By MS/MS 5.88 0.781 3 3 2 8 14904000 14904000 0 5096 947 5265;5266 12249;12250;12251;12252;12253;12254;12255;12256 10051;10052;10053;10054 10054 515 4 141300 0 GISDPLTVFEQTEAAAR DAGACIYFYFAFNYRGISDPLTVFEQTEAA SDPLTVFEQTEAAAREEILANGGSLSHHHG R G I A R E 3 1 0 1 0 1 2 1 0 1 1 0 0 1 1 1 2 0 0 1 0 0 17 0 1803.9003 O00116 O00116 587 603 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.00016872 198.48 By MS/MS 5.5 0.5 1 1 2 654870 654870 0 5097 80 5267 12257;12258 10055 10055 1 6145.4 0 GISEETTTGVHNLYK NLIHTKYPQLLPGIRGISEETTTGVHNLYK GISEETTTGVHNLYKMMANGILKVPAINVN R G I Y K M 0 0 1 0 0 0 2 2 1 1 1 1 0 0 0 1 3 0 1 1 0 0 15 0 1647.8104 P23526 P23526 152 166 AHCY Adenosylhomocysteinase yes yes 2;3 0.00029395 177.57 By MS/MS 7.5 0.5 2 2 4 14114000 14114000 0 5098 706 5268 12259;12260;12261;12262 10056;10057;10058 10056 3 218200 0 GISPVPINLR QEIEAETDRVTGTNKGISPVPINLRVYSPH TGTNKGISPVPINLRVYSPHVLNLTLIDLP K G I L R V 0 1 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1064.6342 P50570;Q05193 P50570 114 123 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 2 0.051719 71.501 By MS/MS 4 0 1 1 991850 991850 0 5099 977 5269 12263 10059 10059 1 93339 0 GISQAEIR MLTQTYDLIERRGTKGISQAEIRVAMNVGK IERRGTKGISQAEIRVAMNVGKLEARMLCR K G I I R V 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 872.47158 Q12789 Q12789 383 390 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.011805 108.74 By MS/MS 3 0.816 1 1 1 3 839920 839920 0 5100 1328 5270 12264;12265;12266 10060;10061 10061 2 174450 0 GISVNAEQVR CKNSHCAQTVSSVFKGISVNAEQVRIELEP SSVFKGISVNAEQVRIELEPPDKAKPLGTV K G I V R I 1 1 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 10 0 1071.5673 Q9H583 Q9H583 1153 1162 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.00029265 140.83 By MS/MS 2 0 1 1 715860 715860 0 5101 2451 5271 12267 10062 10062 1 242130 0 GITGVDLFGTTDAVVK RKKNLSPGAVESDVRGITGVDLFGTTDAVV ITGVDLFGTTDAVVKHVLEGHDRGVNWAAF R G I V K H 1 0 0 2 0 0 0 3 0 1 1 1 0 1 0 0 3 0 0 3 0 0 16 0 1591.8457 P53621 P53621 183 198 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 8.3864E-11 276.35 By MS/MS 4 2 1 1 1 1 1 1 1 7 1614500 1614500 0 5102 1034 5272 12268;12269;12270;12271;12272;12273;12274 10063;10064;10065;10066;10067;10068 10065 6 194190 0 GITINAAHVEYSTAAR KKYEEIDNAPEERARGITINAAHVEYSTAA ITINAAHVEYSTAARHYAHTDCPGHADYVK R G I A R H 4 1 1 0 0 0 1 1 1 2 0 0 0 0 0 1 2 0 1 1 0 0 16 0 1672.8533 P49411 P49411 105 120 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 2.4559E-12 247.73 By MS/MS By matching 8.11 1.37 1 3 1 2 2 8 1 48968000 48930000 37796 5103 949 5273 12275;12276;12277;12278;12279;12280;12281;12282;12283 10069;10070;10071;10072 10072 3 904080 68070 GITSFLVDR LFLVMANVDPTIGYKGITSFLVDRDTPGLH PTIGYKGITSFLVDRDTPGLHIGKPENKLG K G I D R D 0 1 0 1 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 9 0 1006.5447 P45954 P45954 231 239 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0092734 101.72 By MS/MS 7 0 1 1 714900 714900 0 5104 904 5274 12284 10073 10073 1 11223 0 GIVDCIVR VQHASKQIAADKQYKGIVDCIVRIPKEQGV AADKQYKGIVDCIVRIPKEQGVLSFWRGNL K G I V R I 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 2 0 0 8 0 930.49569 P12236 P12236 53 60 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.021662 81.297 By MS/MS 3 0 1 1 216110 216110 0 5105 589 5275 12285 10074 10074 1 3954.2 0 GIVDLIEER AAFMQIPMGLEGNFKGIVDLIEERAIYFDG LEGNFKGIVDLIEERAIYFDGDFGQIVRYG K G I E R A 0 1 0 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1042.5659 Q96RP9 Q96RP9 213 221 GFM1 Elongation factor G, mitochondrial yes yes 2 0.00017281 156.75 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 18013000 18013000 0 5106 2223 5276 12286;12287;12288;12289;12290;12291;12292;12293;12294 10075;10076;10077;10078;10079;10080;10081 10079 7 269340 0 GIVDSITGQR TENLEKISITEGIERGIVDSITGQRLLEAQ EGIERGIVDSITGQRLLEAQACTGGIIHPT R G I Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1044.5564 P15924 P15924 2640 2649 DSP Desmoplakin yes yes 2 0.0010212 123.21 By MS/MS By matching 2 0.707 1 2 1 3 1 1438700 1300100 138650 5107 628 5277 12295;12296;12297;12298 10082;10083 10083 2 398790 196080 GIVFEDVKVPK GRKELNMGQRCSDTRGIVFEDVKVPKENVL SDTRGIVFEDVKVPKENVLIGDGAGFKVAM R G I P K E 0 0 0 1 0 0 1 1 0 1 0 2 0 1 1 0 0 0 0 3 0 0 11 1 1229.702 P11310 P11310 249 259 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0066092 114.86 By MS/MS 8 0.816 1 1 1 3 6489300 6489300 0 5108 577 5278 12299;12300;12301 10084 10084 1 100500 0 GIVLEKVGVEAK TALKANPFGGASHAKGIVLEKVGVEAKQPN HAKGIVLEKVGVEAKQPNSAIRKCVRVQLI K G I A K Q 1 0 0 0 0 0 2 2 0 1 1 2 0 0 0 0 0 0 0 3 0 0 12 1 1240.7391 P62266 P62266 49 60 RPS23 40S ribosomal protein S23 yes yes 2 0.00025233 167.11 By MS/MS 9.5 0.5 1 1 2 3271300 3271300 0 5109 1148 5279 12302;12303 10085;10086 10085 2 119460 0 GIVNEQFLLQR QFATVVEAKLIKHKKGIVNEQFLLQRLADG KHKKGIVNEQFLLQRLADGAIDLYAMVVVL K G I Q R L 0 1 1 0 0 2 1 1 0 1 2 0 0 1 0 0 0 0 0 1 0 0 11 0 1315.7248 P49748 P49748 557 567 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 1.4132E-06 185.6 By MS/MS 5 0 1 1 494440 494440 0 5110 959 5280 12304 10087 10087 1 4959 0 GIVVYTGDR NIAFFSTNCVEGTARGIVVYTGDRTVMGRI VEGTARGIVVYTGDRTVMGRIATLASGLEG R G I D R T 0 1 0 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 1 2 0 0 9 0 978.51345 P05023 P05023 256 264 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0027047 113.26 By MS/MS By matching 3.57 1.59 1 1 1 2 1 1 6 1 17356000 17274000 81957 5111 481 5281 12305;12306;12307;12308;12309;12310;12311 10088;10089;10090;10091;10092 10091 5 2371800 174620 GIYAYGFEKPSAIQQR VDSFDDMNLSESLLRGIYAYGFEKPSAIQQ IYAYGFEKPSAIQQRAILPCIKGYDVIAQA R G I Q R A 2 1 0 0 0 2 1 2 0 2 0 1 0 1 1 1 0 0 2 0 0 0 16 1 1826.9315 P60842;Q14240;P38919 P60842 46 61 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2;3 3.6704E-11 246.51 By MS/MS 5.74 2.64 2 2 1 2 2 5 3 2 2 2 23 1273800000 1273800000 0 5112 1097;851 5282 12312;12313;12314;12315;12316;12317;12318;12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330;12331;12332;12333;12334 10093;10094;10095;10096;10097;10098;10099;10100;10101;10102;10103;10104;10105;10106;10107;10108 10103 16 11546000 0 GIYFADMVSK IAPPEAPVTGYMFGKGIYFADMVSKSANYC YMFGKGIYFADMVSKSANYCHTSQGDPIGL K G I S K S 1 0 0 1 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 1 0 0 10 0 1129.5478 P09874 P09874 894 903 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.027082 94.692 By MS/MS 3.5 0.5 1 1 2 1103500 1103500 0 5113 543 5283 12335;12336 10109 10109 1 90014 0 GIYLWDVEGR AHNYHPLPVALERGKGIYLWDVEGRKYFDF LERGKGIYLWDVEGRKYFDFLSSYSAVNQG K G I G R K 0 1 0 1 0 0 1 2 0 1 1 0 0 0 0 0 0 1 1 1 0 0 10 0 1206.6033 P04181 P04181 67 76 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.0043033 107.15 By MS/MS 7 0 1 1 161880 161880 0 5114 470 5284 12337 10110 10110 1 2541.3 0 GIYTGLSAGLLR SFHALTSILKAEGLRGIYTGLSAGLLRQAT GLRGIYTGLSAGLLRQATYTTTRLGIYTVL R G I L R Q 1 1 0 0 0 0 0 3 0 1 3 0 0 0 0 1 1 0 1 0 0 0 12 0 1219.6925 Q02978 Q02978 79 90 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 6.2975E-05 163.38 By MS/MS 8 0 1 1 6186300 6186300 0 5115 1284 5285 12338 10111 10111 1 78101 0 GIYVIQAPK VERSSLTLATAINQRGIYVIQAPKGGQKIS TAINQRGIYVIQAPKGGQKISPDTVLHLIL R G I P K G 1 0 0 0 0 1 0 1 0 2 0 1 0 0 1 0 0 0 1 1 0 0 9 0 987.57532 Q63HN8 Q63HN8 1544 1552 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.041862 79.469 By MS/MS 1 0 1 1 83268 83268 0 5116 1664 5286 12339 10112 10112 1 20065 0 GKATISNDGATILK TLGPRGMDKLIVDGRGKATISNDGATILKL RGKATISNDGATILKLLDVVHPAAKTLVDI R G K L K L 2 0 1 1 0 0 0 2 0 2 1 2 0 0 0 1 2 0 0 0 0 0 14 1 1387.7671 Q99832 Q99832 54 67 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.00037598 151.16 By MS/MS 6.33 0.471 2 1 3 22545000 22545000 0 5117 2270 5287 12340;12341;12342 10113;10114;10115 10115 3 157320 0 GKDCAVIVTQK FKAINQGGLTSVAVRGKDCAVIVTQKKVPD VAVRGKDCAVIVTQKKVPDKLLDSSTVTHL R G K Q K K 1 0 0 1 1 1 0 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 11 1 1217.6438 P60900 P60900 44 54 PSMA6 Proteasome subunit alpha type-6 yes yes 2 5.2525E-05 172.61 By MS/MS 8 0 1 1 2758500 2758500 0 5118 1099 5288 12343 10116 10116 1 34826 0 GKDHVVSDFSEHGSLK PVGLEGLLTTKWLLRGKDHVVSDFSEHGSL KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ R G K L K Y 0 0 0 2 0 0 1 2 2 0 1 2 0 1 0 3 0 0 0 2 0 0 16 1 1740.8431 P54886 P54886 766 781 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3;4 1.7134E-18 261.45 By MS/MS 5.25 0.968 2 3 2 1 8 15076000 15076000 0 5119 1048 5289 12344;12345;12346;12347;12348;12349;12350;12351 10117;10118;10119 10119 3 169860 0 GKDSLYAQGK KCGKHQPHKVTQYKKGKDSLYAQGKRRYDR TQYKKGKDSLYAQGKRRYDRKQSGYGGQTK K G K G K R 1 0 0 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1065.5455 P83881 P83881 29 38 RPL36A 60S ribosomal protein L36a yes yes 2 7.303E-05 171.33 By MS/MS 10 0 1 1 1630000 1630000 0 5120 1242 5290 12352 10120 10120 1 87852 0 GKDYYQTLGLAR ______________________________ ______________________________ M G K A R G 1 1 0 1 0 1 0 2 0 0 2 1 0 0 0 0 1 0 2 0 0 0 12 1 1383.7147 P25685 P25685 2 13 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.00030989 163.46 By MS/MS 7 0 1 1 1101500 1101500 0 5121 722 5291 12353 10121 10121 1 17291 0 GKEDEGEEAASPMLQIQR IPLDEGEDEAQRRRKGKEDEGEEAASPMLQ DEGEEAASPMLQIQRDAATIMQPYFTSNGL K G K Q R D 2 1 0 1 0 2 4 2 0 1 1 1 1 0 1 1 0 0 0 0 0 0 18 1 1986.9317 Q14204 Q14204 2400 2417 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0001388 144.4 By MS/MS 1.33 0.471 2 1 3 941530 941530 0 5122 1433 5292;5293 12354;12355;12356 10122;10123;10124 10123 829 3 237700 0 GKEVDNFVDKLK ARPSGPSKALKLGAKGKEVDNFVDKLKSEG GAKGKEVDNFVDKLKSEGETIMSSSMGKRT K G K L K S 0 0 1 2 0 0 1 1 0 0 1 3 0 1 0 0 0 0 0 2 0 0 12 2 1390.7456 P48444 P48444 232 243 ARCN1 Coatomer subunit delta yes yes 3 0.0013033 115.34 By MS/MS 6 0 1 1 3090000 3090000 0 5123 934 5294 12357 10125 10125 1 21241 0 GKFSEGEATLR RPMEESLLLFEAMRKGKFSEGEATLRMKLV AMRKGKFSEGEATLRMKLVMEDGKMDPVAY K G K L R M 1 1 0 0 0 0 2 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 1 1193.6041 P47897 P47897 393 403 QARS Glutamine--tRNA ligase yes yes 2 0.0038412 126.03 By MS/MS 4 0 1 1 531020 531020 0 5124 928 5295 12358 10126 10126 1 49973 0 GKGDKAQIEK VGEVIVTKDDAMLLKGKGDKAQIEKRIQEI AMLLKGKGDKAQIEKRIQEIIEQLDVTTSE K G K E K R 1 0 0 1 0 1 1 2 0 1 0 3 0 0 0 0 0 0 0 0 0 0 10 2 1072.5877 P10809 P10809 360 369 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0046465 131.12 By MS/MS 6.5 0.5 1 1 2 2461100 2461100 0 5125 569 5296 12359;12360 10127 10127 1 18840 0 GKGGEIQPVSVK KVLQATVVAVGSGSKGKGGEIQPVSVKVGD GSKGKGGEIQPVSVKVGDKVLLPEYGGTKV K G K V K V 0 0 0 0 0 1 1 3 0 1 0 2 0 0 1 1 0 0 0 2 0 0 12 1 1197.6717 P61604 P61604 55 66 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.040852 113.38 By MS/MS 10 0 1 1 752920 752920 0 5126 1126 5297 12361 10128 10128 1 40580 0 GKHLSFVVR YHEERTILPMSRAFRGKHLSFVVRFPNQGR MSRAFRGKHLSFVVRFPNQGRQVDDLEVWS R G K V R F 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 2 0 0 9 1 1041.6083 Q93008 Q93008 883 891 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.0011201 144.77 By MS/MS 2 0 1 1 608100 608100 0 5127 2085 5298 12362 10129 10129 1 205680 0 GKIGLDFCK LLVATPGRLVDMMERGKIGLDFCKYLVLDE VDMMERGKIGLDFCKYLVLDEADRMLDMGF R G K C K Y 0 0 0 1 1 0 0 2 0 1 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1036.5376 O00571;O15523 O00571 334 342 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.0096176 104.01 By MS/MS 5 0 1 1 1275700 1275700 0 5128 116 5299 12363 10130 10130 1 12795 0 GKNDGTVQGR FATGKWVGVILDEAKGKNDGTVQGRKYFTC LDEAKGKNDGTVQGRKYFTCDEGHGIFVRQ K G K G R K 0 1 1 1 0 1 0 3 0 0 0 1 0 0 0 0 1 0 0 1 0 0 10 1 1030.5156 Q14203 Q14203 67 76 DCTN1 Dynactin subunit 1 yes yes 2 0.003692 133.99 By MS/MS 3 0 1 1 0 0 0 5129 1432 5300 12364 10131 10131 1 0 0 GKNENESEKR ______________________________ KNRRRGKNENESEKRELVFKEDGQEYAQVI R G K K R E 0 1 2 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 10 2 1189.5687 P47813;O14602 P47813 15 24 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2;3 3.073E-17 223.36 By MS/MS 9.5 0.5 2 2 4 1295300 1295300 0 5130 927 5301 12365;12366;12367;12368 10132;10133;10134;10135 10133 4 29028 0 GKPLALVEEIR STPGTIILGTIPVPKGKPLALVEEIRNRKD PVPKGKPLALVEEIRNRKDVKVFNVTKENR K G K I R N 1 1 0 0 0 0 2 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 11 1 1223.7238 Q9BSD7 Q9BSD7 149 159 NTPCR Cancer-related nucleoside-triphosphatase yes yes 3 0.036954 84.479 By MS/MS 9 0 1 1 126560 126560 0 5131 2304 5302 12369 10136 10136 1 2490.6 0 GKQLIVANAGDSR PGSDSGTTAVVALIRGKQLIVANAGDSRCV IRGKQLIVANAGDSRCVVSEAGKALDMSYD R G K S R C 2 1 1 1 0 1 0 2 0 1 1 1 0 0 0 1 0 0 0 1 0 0 13 1 1327.7208 O15355 O15355 338 350 PPM1G Protein phosphatase 1G yes yes 2 0.0096804 112.64 By MS/MS 5 0 1 1 366620 366620 0 5132 184 5303 12370 10137 10137 1 3677 0 GKSSFFSDR DKDAYSSFGSRSDSRGKSSFFSDRGSGSRG SRSDSRGKSSFFSDRGSGSRGRFDDRGRSD R G K D R G 0 1 0 1 0 0 0 1 0 0 0 1 0 2 0 3 0 0 0 0 0 0 9 1 1029.488 O00571 O00571 80 88 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.0021106 148.94 By MS/MS 5 0 1 1 2216900 2216900 0 5133 116 5304 12371 10138 10138 1 22235 0 GKTPEEIRK GLLDVTCKTVANMIKGKTPEEIRKTFNIKN VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ K G K R K T 0 1 0 0 0 0 2 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 1056.5928 P63208 P63208 129 137 SKP1 S-phase kinase-associated protein 1 yes yes 3 0.047972 94.85 By MS/MS 9 0 1 1 601410 601410 0 5134 1198 5305 12372 10139 10139 1 11836 0 GKVTAVHK RIAKFAFDYATKKGRGKVTAVHKANIMKLG YATKKGRGKVTAVHKANIMKLGDGLFLQCC R G K H K A 1 0 0 0 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 2 0 0 8 1 838.50249 O43837 O43837 211 218 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 0.0077774 147.34 By MS/MS 7 0 1 1 381800 381800 0 5135 242 5306 12373 10140 10140 1 5993.5 0 GKYDCGHVQK GRTQDLPGVKLTVVRGKYDCGHVQKK____ LTVVRGKYDCGHVQKK______________ R G K Q K K 0 0 0 1 1 1 0 2 1 0 0 2 0 0 0 0 0 0 1 1 0 0 10 1 1190.5502 O15235 O15235 128 137 MRPS12 28S ribosomal protein S12, mitochondrial yes yes 2;3 0.02485 105.52 By MS/MS 10 0 2 2 1068100 1068100 0 5136 173 5307 12374;12375 10141;10142 10142 2 57566 0 GKYKEETIEK ILERKAKSRQVGKEKGKYKEETIEKMQE__ VGKEKGKYKEETIEKMQE____________ K G K E K M 0 0 0 0 0 0 3 1 0 1 0 3 0 0 0 0 1 0 1 0 0 0 10 2 1223.6398 P61254 P61254 133 142 RPL26 60S ribosomal protein L26 yes yes 2;3 5.2092E-07 174.86 By MS/MS 9 0 2 2 4900500 4900500 0 5137 1119 5308 12376;12377 10143;10144 10144 2 96443 0 GLAAALLLCQNK ASSTTILDEEPIVNRGLAAALLLCQNKGLL VNRGLAAALLLCQNKGLLETTVQKVARVKA R G L N K G 3 0 1 0 1 1 0 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 12 0 1270.7067 O43290 O43290 637 648 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 2 0.025623 84.568 By MS/MS 4 0 1 1 101520 101520 0 5138 201 5309 12378 10145 10145 0 9553.5 0 GLAAGSAETLPANFR RAPSWRKKFRPKDIRGLAAGSAETLPANFR GLAAGSAETLPANFRVTSSMSSPSMQPKKM R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 0.00044859 203.03 By MS/MS 3 0 1 1 338750 338750 0 5139 1356 5310 12379 10146 10146 1 6198.2 0 GLAGAVSELLR EDEGGSGRPLLQAAKGLAGAVSELLRSAQP QAAKGLAGAVSELLRSAQPASAEPRQNLLQ K G L L R S 2 1 0 0 0 0 1 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1084.6241 Q9Y490 Q9Y490 614 624 TLN1 Talin-1 yes yes 2 5.7762E-05 155.58 By MS/MS 2 0 1 1 175030 175030 0 5140 2888 5311 12380 10147 10147 1 59204 0 GLAITFVSDENDAK TYLHRVARAGRFGTKGLAITFVSDENDAKI KGLAITFVSDENDAKILNDVQDRFEVNVAE K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 O00148;Q13838 O00148 384 397 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.006217 100.55 By MS/MS 1 0 1 1 85658 85658 0 5141 83 5312 12381 10148 10148 1 20641 0 GLALALFGGEPK ASIAPSIYGHEDIKRGLALALFGGEPKNPG IKRGLALALFGGEPKNPGGKHKVRGDINVL R G L P K N 2 0 0 0 0 0 1 3 0 0 3 1 0 1 1 0 0 0 0 0 0 0 12 0 1171.6601 P49736 P49736 494 505 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0018679 112.71 By MS/MS 4 0.816 1 1 1 3 310180 310180 0 5142 958 5313 12382;12383;12384 10149;10150;10151;10152 10150 2 15700 0 GLALGIAK KTKEAGKILSNNPSKGLALGIAKAWELYGS LSNNPSKGLALGIAKAWELYGSPNALVLLI K G L A K A 2 0 0 0 0 0 0 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 741.47487 P48637 P48637 187 194 GSS Glutathione synthetase yes yes 2 0.052875 81.381 By MS/MS 7 0.816 1 1 1 3 9542900 9542900 0 5143 939 5314 12385;12386;12387 10153 10153 1 116570 0 GLAPDLPEDLYHLIK RFVTGNKILRILKSKGLAPDLPEDLYHLIK GLAPDLPEDLYHLIKKAVAVRKHLERNRKD K G L I K K 1 0 0 2 0 0 1 1 1 1 4 1 0 0 2 0 0 0 1 0 0 0 15 0 1692.9087 P62277 P62277 79 93 RPS13 40S ribosomal protein S13 yes yes 2;3 0.00054168 125.72 By MS/MS 9.33 0.471 2 1 3 307010 307010 0 5144 1151 5315 12388;12389;12390 10154;10155;10156 10155 3 7181.6 0 GLATFCLDK PEGPYGVFAGRDASRGLATFCLDKEALKDE GRDASRGLATFCLDKEALKDEYDDLSDLTA R G L D K E 1 0 0 1 1 0 0 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 9 0 1023.5059 O00264;O15173 O00264 124 132 PGRMC1;PGRMC2 Membrane-associated progesterone receptor component 1;Membrane-associated progesterone receptor component 2 no no 2 0.0016533 120.87 By MS/MS 8.5 0.5 1 1 2 3170100 3170100 0 5145 96;168 5316 12391;12392 10157;10158 10157 2 49591 0 GLATVIR VTIGGINIAEALVSKGLATVIRYRQDDDQR IAEALVSKGLATVIRYRQDDDQRSSHYDEL K G L I R Y 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 7 0 728.45447 Q7KZF4 Q7KZF4 458 464 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.01823 114.02 By MS/MS 4.5 0.5 1 1 2 1907700 1907700 0 5146 1755 5317 12393;12394 10159 10159 1 146550 0 GLAYVCHQR YFDQLYAWAVELIRRGLAYVCHQRGEELKG VELIRRGLAYVCHQRGEELKGHNTLPSPWR R G L Q R G 1 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1102.5342 P47897 P47897 353 361 QARS Glutamine--tRNA ligase yes yes 2 0.0021602 107.43 By MS/MS 4 0 1 1 483550 483550 0 5147 928 5318 12395 10160 10160 1 45505 0 GLCAIAQAESLR PEGSVELYAEKVATRGLCAIAQAESLRYKL ATRGLCAIAQAESLRYKLLGGLAVRRACYG R G L L R Y 3 1 0 0 1 1 1 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1287.6605 P23396 P23396 95 106 RPS3 40S ribosomal protein S3 yes yes 2 2.2853E-12 227.27 By MS/MS By MS/MS 6.62 3.08 1 1 1 3 1 1 7 1 131000000 130900000 92433 5148 703 5319 12396;12397;12398;12399;12400;12401;12402;12403 10161;10162;10163;10164;10165;10166;10167;10168 10164 8 1935000 124730 GLCEKPLASAAAK RNPQFLDPVLGYLMKGLCEKPLASAAAKAI MKGLCEKPLASAAAKAIHNICSVCRDHMAQ K G L A K A 4 0 0 0 1 0 1 1 0 0 2 2 0 0 1 1 0 0 0 0 0 0 13 1 1314.6966 Q9Y5L0 Q9Y5L0 509 521 TNPO3 Transportin-3 yes yes 2 0.005417 124.39 By MS/MS 4 0 1 1 727510 727510 0 5149 2915 5320 12404 10169 10169 1 68463 0 GLCGAIHSSIAK EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK SDRGLCGAIHSSIAKQMKSEVATLTAAGKE R G L A K Q 2 0 0 0 1 0 0 2 1 2 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1212.6285 P36542 P36542 101 112 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.0047751 104.22 By MS/MS 8.5 1.12 1 1 1 1 4 11083000 11083000 0 5150 835 5321 12405;12406;12407;12408 10170 10170 1 147280 0 GLDFSDR NAAYDKFKDKRVGTKGLDFSDRIGKTKRTG KDKRVGTKGLDFSDRIGKTKRTGYESGEYE K G L D R I 0 1 0 2 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 7 0 808.37153 Q13561 Q13561 66 72 DCTN2 Dynactin subunit 2 yes yes 2 0.048731 90.777 By MS/MS 6 0 1 1 1562600 1562600 0 5151 1397 5322 12409 10171 10171 1 10742 0 GLDNKNPK IEIEKGEAVQEELLKGLDNKNPKIIVACIE VQEELLKGLDNKNPKIIVACIETLRKALSE K G L P K I 0 0 2 1 0 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 8 1 884.47158 Q14008 Q14008 132 139 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0025468 157.58 By MS/MS 2 0 1 1 716320 716320 0 5152 1417 5323 12410 10172 10172 1 242290 0 GLDPVEILQER LHQKQSRITPIQKPRGLDPVEILQEREYRL QKPRGLDPVEILQEREYRLQARIAHRIQEL R G L E R E 0 1 0 1 0 1 2 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1267.6772 P51532 P51532 360 370 SMARCA4 Transcription activator BRG1 yes yes 2 0.0079533 96.113 By MS/MS 2.5 1.12 1 1 1 1 4 645440 645440 0 5153 995 5324 12411;12412;12413;12414 10173;10174 10173 1 176000 0 GLDPYNVLAPK QATGLEREIMLAAKKGLDPYNVLAPKGASG AAKKGLDPYNVLAPKGASGTREDPNLVPSI K G L P K G 1 0 1 1 0 0 0 1 0 0 2 1 0 0 2 0 0 0 1 1 0 0 11 0 1185.6394 P10606 P10606 58 68 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2 0.017631 86.882 By MS/MS 10 0 1 1 1344400 1344400 0 5154 564 5325 12415 10175 10175 1 72461 0 GLDVEDVK HGKAPILIATDVASRGLDVEDVKFVINYDY ATDVASRGLDVEDVKFVINYDYPNSSEDYI R G L V K F 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 873.44436 P17844;Q92841 P17844 404 411 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.021068 98.458 By MS/MS 5 0 1 1 877150 877150 0 5155 646;2073 5326 12416 10176 10176 1 8797.4 0 GLDYEGGGCR HDSSTFTLNVALNHKGLDYEGGGCRFLRYD ALNHKGLDYEGGGCRFLRYDCVISSPRKGW K G L C R F 0 1 0 1 1 0 1 4 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 0 1082.4451 O60568 O60568 683 692 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 2 0.050012 72.325 By MS/MS 5 0 1 1 378670 378670 0 5156 264 5327 12417 10177 10177 1 3797.9 0 GLEDPSQVVR IRQRLLPPLLQIVCKGLEDPSQVVRNAALF QIVCKGLEDPSQVVRNAALFALGQFSENLQ K G L V R N 0 1 0 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 10 0 1098.5669 Q8TEX9 Q8TEX9 402 411 IPO4 Importin-4 yes yes 2 0.0075638 99.815 By MS/MS 4 0.816 1 1 1 3 3278900 3278900 0 5157 2005 5328 12418;12419;12420 10178;10179 10178 2 134060 0 GLEEFFDDPK SFHQYRLLHTTLSRKGLEEFFDDPKNWGQE TLSRKGLEEFFDDPKNWGQEKVKSGAAWTC K G L P K N 0 0 0 2 0 0 2 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 10 0 1195.5397 Q9HD33 Q9HD33 63 72 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 0.0050842 105.4 By MS/MS 9 0 1 1 412710 412710 0 5158 2518 5329 12421 10180 10180 1 8122.2 0 GLEELIDYTGGLK KVLHKFSGYGQLCERGLEELIDYTGGLKHE ERGLEELIDYTGGLKHEILQSHGQDAELSG R G L L K H 0 0 0 1 0 0 2 3 0 1 3 1 0 0 0 0 1 0 1 0 0 0 13 0 1406.7293 Q9H871 Q9H871 28 40 RMND5A Protein RMD5 homolog A yes yes 2 0.00031805 150.46 By MS/MS 7 0 1 1 63758 63758 0 5159 2473 5330 12422 10181 10181 1 1000.9 0 GLELLENSLLR IEVFLQRTEESVISKGLELLENSLLRIEDN VISKGLELLENSLLRIEDNSLLYQYLEIKS K G L L R I 0 1 1 0 0 0 2 1 0 0 5 0 0 0 0 1 0 0 0 0 0 0 11 0 1255.7136 Q92990 Q92990 335 345 GLMN Glomulin yes yes 2 5.0682E-09 204.34 By MS/MS 5.5 0.5 1 1 2 712510 712510 0 5160 2084 5331 12423;12424 10182;10183;10184 10184 3 5069.1 0 GLEYLYLNVHDEDRDDQTR LIRKIQGIEEYKKGRGLEYLYLNVHDEDRD LYLNVHDEDRDDQTRCNVWILDGDLYHKGL R G L T R C 0 2 1 4 0 1 2 1 1 0 3 0 0 0 0 0 1 0 2 1 0 0 19 1 2350.0826 Q9Y6G9 Q9Y6G9 98 116 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 3 0.00013224 123.02 By MS/MS 6 0 1 1 4813600 4813600 0 5161 2943 5332 12425 10185 10185 1 33090 0 GLFAQLIR ARLVFREEGYLAFYRGLFAQLIRQIPNTAI GYLAFYRGLFAQLIRQIPNTAIVLSTYELI R G L I R Q 1 1 0 0 0 1 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 916.54944 Q9BSK2 Q9BSK2 290 297 SLC25A33 Solute carrier family 25 member 33 yes yes 2 0.03848 86.866 By MS/MS 8 0 1 1 75786 75786 0 5162 2309 5333 12426 10186 10186 1 956.79 0 GLFATQLIR RVSVEVRFVSSAKGKGLFATQLIRKGETIF SSAKGKGLFATQLIRKGETIFVERPLVAAQ K G L I R K 1 1 0 0 0 1 0 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1017.5971 Q6GMV2 Q6GMV2 35 43 SMYD5 SET and MYND domain-containing protein 5 yes yes 2 0.00083989 136.27 By MS/MS 7 0 1 1 224070 224070 0 5163 1678 5334 12427 10187 10187 1 3517.5 0 GLFDEYGSK VTFKSILFVPTSAPRGLFDEYGSKKSDYIK PTSAPRGLFDEYGSKKSDYIKLYVRRVFIT R G L S K K 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 1 0 0 1 0 0 0 9 0 1014.4658 P14625;Q58FF3 P14625 396 404 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 2 0.012151 96.668 By MS/MS 4.5 0.5 1 1 2 4165300 4165300 0 5164 615 5335 12428;12429 10188 10188 1 345540 0 GLFIIDDK QDYGVLKADEGISFRGLFIIDDKGILRQIT DEGISFRGLFIIDDKGILRQITVNDLPVGR R G L D K G 0 0 0 2 0 0 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 919.50148 Q06830;Q13162 Q06830 129 136 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 2 0.026461 92.47 By MS/MS 9.5 0.5 1 1 2 1799100 1799100 0 5165 1297;1361 5336 12430;12431 10189 10189 1 41576 0 GLFIIDDKGILR QDYGVLKADEGISFRGLFIIDDKGILRQIT SFRGLFIIDDKGILRQITVNDLPVGRSVDE R G L L R Q 0 1 0 2 0 0 0 2 0 3 2 1 0 1 0 0 0 0 0 0 0 0 12 1 1358.7922 Q06830;Q13162 Q06830 129 140 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 2;3 0.00039193 132.25 By MS/MS 8.67 0.471 1 2 3 2456700 2456700 0 5166 1297;1361 5337 12432;12433;12434 10190;10191;10192 10192 3 43844 0 GLFIIDGK EDYGVLKTDEGIAYRGLFIIDGKGVLRQIT DEGIAYRGLFIIDGKGVLRQITVNDLPVGR R G L G K G 0 0 0 1 0 0 0 2 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 861.496 P32119 P32119 128 135 PRDX2 Peroxiredoxin-2 yes yes 2 0.031911 89.369 By MS/MS 9 0 1 1 1404400 1404400 0 5167 796 5338 12435 10193 10193 1 27639 0 GLFIIDPNGVIK RDYGVLLEGSGLALRGLFIIDPNGVIKHLS ALRGLFIIDPNGVIKHLSVNDLPVGRSVEE R G L I K H 0 0 1 1 0 0 0 2 0 3 1 1 0 1 1 0 0 0 0 1 0 0 12 0 1284.7442 P30048 P30048 185 196 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.0014007 117.71 By MS/MS 8.5 0.5 1 1 2 1662600 1662600 0 5168 764 5339 12436;12437 10194;10195 10195 2 27991 0 GLFLPEDENLR KLIRDEGLAVMDKAKGLFLPEDENLREKGD DKAKGLFLPEDENLREKGDWSQFTLWQQGR K G L L R E 0 1 1 1 0 0 2 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 11 0 1301.6616 Q12797 Q12797 610 620 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.0022185 81.95 By MS/MS 3.5 0.5 1 1 2 684450 684450 0 5169 1329 5340 12438;12439 10196;10197 10197 2 58760 0 GLFLPEDENLREK KLIRDEGLAVMDKAKGLFLPEDENLREKGD AKGLFLPEDENLREKGDWSQFTLWQQGRRN K G L E K G 0 1 1 1 0 0 3 1 0 0 3 1 0 1 1 0 0 0 0 0 0 0 13 1 1558.7991 Q12797 Q12797 610 622 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.0399 94.465 By MS/MS 4 0 1 1 962240 962240 0 5170 1329 5341 12440 10198 10198 1 90554 0 GLFSANDWQCK AGGTEIGKTLAEKSRGLFSANDWQCKTCSN EKSRGLFSANDWQCKTCSNVNWARRSECNM R G L C K T 1 0 1 1 1 1 0 1 0 0 1 1 0 1 0 1 0 1 0 0 0 0 11 0 1324.587 O95218 O95218 62 72 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.0011186 119.22 By MS/MS 7 0 1 1 388160 388160 0 5171 395 5342 12441 10199 10199 1 6093.4 0 GLFTGLTPR LFSYAQHIASIDGRRGLFTGLTPRLCSGVL SIDGRRGLFTGLTPRLCSGVLGTVVHGKVL R G L P R L 0 1 0 0 0 0 0 2 0 0 2 0 0 1 1 0 2 0 0 0 0 0 9 0 960.53927 Q9Y6C9 Q9Y6C9 69 77 MTCH2 Mitochondrial carrier homolog 2 yes yes 2 0.0020671 120.46 By MS/MS 8 0 1 1 898760 898760 0 5172 2938 5343 12442 10200 10200 1 11347 0 GLGAGAGAGEESPATSLPR VLLGAYRLWVRWGRRGLGAGAGAGEESPAT GAGAGEESPATSLPRMKKRDFSLEQLRQYD R G L P R M 4 1 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 19 0 1696.838 O15173 O15173 79 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 2.0769E-07 209.11 By MS/MS 8.5 0.5 1 1 2 3868300 3868300 0 5173 168 5344 12443;12444 10201;10202;10203;10204 10204 4 60158 0 GLGATFILR KISQFLGICIQRSGRGLGATFILRNVIEGQ IQRSGRGLGATFILRNVIEGQGVEICFELY R G L L R N 1 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 946.56 P49406 P49406 144 152 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 2.4521E-05 176.41 By MS/MS 8 0 1 1 1049700 1049700 0 5174 948 5345 12445 10205 10205 1 13252 0 GLGATTHPTAAVK TLLEISKRFRKEMEKGLGATTHPTAAVKML EKGLGATTHPTAAVKMLPTFVRSTPDGTEH K G L V K M 3 0 0 0 0 0 0 2 1 0 1 1 0 0 1 0 3 0 0 1 0 0 13 0 1222.667 P52789 P52789 50 62 HK2 Hexokinase-2 yes yes 2 0.047601 54.784 By MS/MS 4 0 1 1 470670 470670 0 5175 1023 5346 12446 10206 10206 0 44293 0 GLGDCLVK LAADVGKAGAEREFRGLGDCLVKIYKSDGI GAEREFRGLGDCLVKIYKSDGIKGLYQGFN R G L V K I 0 0 0 1 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 860.44259 P05141;P12236 P05141 156 163 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.00045979 158.12 By MS/MS By MS/MS 5.62 2.87 1 2 1 1 1 1 1 3 1 1 10 3 277320000 275480000 1845700 5176 487;589 5347 12447;12448;12449;12450;12451;12452;12453;12454;12455;12456;12457;12458;12459 10207;10208;10209;10210;10211;10212;10213;10214;10215;10216;10217;10218 10215 12 11976000 2414100 GLGDCLVKITK LAADVGKSGTEREFRGLGDCLVKITKSDGI REFRGLGDCLVKITKSDGIRGLYQGFSVSV R G L T K S 0 0 0 1 1 0 0 2 0 1 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1202.6693 P12236 P12236 156 166 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.00097296 143.4 By MS/MS 4.5 3.5 1 1 2 1235300 1235300 0 5177 589 5348 12460;12461 10219;10220;10221 10221 3 62044 0 GLGDCLVKIYK LAADVGKAGAEREFRGLGDCLVKIYKSDGI REFRGLGDCLVKIYKSDGIKGLYQGFNVSV R G L Y K S 0 0 0 1 1 0 0 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 11 1 1264.6849 P05141 P05141 156 166 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.0032822 128.28 By MS/MS 8.5 0.5 1 1 2 2024200 2024200 0 5178 487 5349 12462;12463 10222 10222 1 26123 0 GLGDRPAPK PLPPAQPGAEGGGDRGLGDRPAPKDKWSNF EGGGDRGLGDRPAPKDKWSNFDPTGLERAA R G L P K D 1 1 0 1 0 0 0 2 0 0 1 1 0 0 2 0 0 0 0 0 0 0 9 1 909.50321 Q9NVI7;Q5T9A4 Q5T9A4 36 44 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 0.0040107 137.14 By MS/MS By MS/MS 5 0 2 1 1 10842000 10778000 64553 5179 2598;1638 5350 12464;12465 10223;10224 10224 2 108100 54211 GLGGLLEVPEQPR QALEELEKTGNFLAKGLGGLLEVPEQPRVQ AKGLGGLLEVPEQPRVQPAVPLQCLLHRDM K G L P R V 0 1 0 0 0 1 2 3 0 0 3 0 0 0 2 0 0 0 0 1 0 0 13 0 1363.746 Q562E7 Q562E7 744 756 WDR81 WD repeat-containing protein 81 yes yes 2 0.00045304 136.49 By MS/MS 2 0 1 1 294310 294310 0 5180 1593 5351 12466 10225 10225 1 99548 0 GLGGPTSTPPNLISQEQLVR EAIIACSLYAVLNKRGLGGPTSTPPNLISQ TSTPPNLISQEQLVRKAASLCYLLSNEGTI R G L V R K 0 1 1 0 0 2 1 3 0 1 3 0 0 0 3 2 2 0 0 1 0 0 20 0 2063.1011 Q9HCL2 Q9HCL2 598 617 GPAM Glycerol-3-phosphate acyltransferase 1, mitochondrial yes yes 2 5.6563E-06 135.61 By MS/MS 4.5 0.5 1 1 2 1025000 1025000 0 5181 2514 5352 12467;12468 10226 10226 1 76628 0 GLGILSLK AERKGAAYGLAGLVKGLGILSLKQQEMMAA GLAGLVKGLGILSLKQQEMMAALTDAIQDK K G L L K Q 0 0 0 0 0 0 0 2 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 0 799.51674 Q92616 Q92616 1407 1414 GCN1L1 Translational activator GCN1 yes yes 2 0.01284 107.59 By MS/MS 2 0 1 1 380770 380770 0 5182 2064 5353 12469 10227 10227 1 128790 0 GLGLDDALEPR DVTRIERIGAHSHIRGLGLDDALEPRQASQ SHIRGLGLDDALEPRQASQGMVGQLAARRA R G L P R Q 1 1 0 2 0 0 1 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 11 0 1154.5932 Q9Y230 Q9Y230 30 40 RUVBL2 RuvB-like 2 yes yes 2 0.00011752 150.35 By MS/MS By MS/MS 7.4 1.5 2 1 1 1 4 1 28853000 28727000 125890 5183 2810 5354 12470;12471;12472;12473;12474 10228;10229;10230 10229 3 219580 129000 GLGLDESGLAK STTKTQRIASHSHVKGLGLDESGLAKQAAS SHVKGLGLDESGLAKQAASGLVGQENAREA K G L A K Q 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1058.5608 Q9Y265 Q9Y265 23 33 RUVBL1 RuvB-like 1 yes yes 2 1.9123E-05 164.68 By MS/MS By MS/MS 7.4 1.5 2 1 1 1 4 1 24565000 24378000 187550 5184 2815 5355 12475;12476;12477;12478;12479 10231;10232;10233;10234 10232 3 192450 192190 GLGLGTEGPQGTGGLEPDLAR WAVLCVACDRPRGCKGLGLGTEGPQGTGGL EGPQGTGGLEPDLARGRWACQSCTFENEAA K G L A R G 1 1 0 1 0 1 2 7 0 0 4 0 0 0 2 0 2 0 0 0 0 0 21 0 1994.0069 Q96EP0 Q96EP0 331 351 RNF31 E3 ubiquitin-protein ligase RNF31 yes yes 2 2.0228E-05 161.49 By MS/MS 4 0 1 1 581520 581520 0 5185 2147 5356 12480 10235 10235 1 54725 0 GLGLSPDLVVCR EQKTKPTQNSVRELRGLGLSPDLVVCRCSN ELRGLGLSPDLVVCRCSNPLDTSVKEKISM R G L C R C 0 1 0 1 1 0 0 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 12 0 1284.686 P17812 P17812 206 217 CTPS1 CTP synthase 1 yes yes 2 0.00037117 125.57 By MS/MS 5 0 1 1 1709100 1709100 0 5186 645 5357 12481 10236 10236 1 17141 0 GLGPLAEAAAAGDGAAAAGAAR GVFFSNNHPGAGGAKGLGPLAEAAAAGDGA AAAAGDGAAAAGAARAQYSLPGILHFLQHE K G L A R A 11 1 0 1 0 0 1 5 0 0 2 0 0 0 1 0 0 0 0 0 0 0 22 0 1807.9177 O43815 O43815 23 44 STRN Striatin yes yes 2 1.2617E-26 278.64 By MS/MS 4.5 0.5 1 1 2 2135400 2135400 0 5187 237 5358 12482;12483 10237;10238 10237 2 184060 0 GLGPNLVGVAPSR LKSILEKEGPKSLFRGLGPNLVGVAPSRAV FRGLGPNLVGVAPSRAVYFACYSKAKEQFN R G L S R A 1 1 1 0 0 0 0 3 0 0 2 0 0 0 2 1 0 0 0 2 0 0 13 0 1235.6986 Q96CQ1;Q9BSK2 Q9BSK2 93 105 SLC25A36;SLC25A33 Solute carrier family 25 member 36;Solute carrier family 25 member 33 no no 2 0.000323 149.94 By MS/MS 8.5 1.12 1 1 1 1 4 6742600 6742600 0 5188 2124;2309 5359 12484;12485;12486;12487 10239;10240 10239 2 102590 0 GLGSAFLR VADIPGIIRGAHQNRGLGSAFLRHIERCRF RGAHQNRGLGSAFLRHIERCRFLLFVVDLS R G L L R H 1 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 819.46029 Q9H4K7 Q9H4K7 291 298 MTG2 Mitochondrial ribosome-associated GTPase 2 yes yes 2 0.0097398 111.04 By MS/MS 7 0 1 1 391670 391670 0 5189 2448 5360 12488 10241 10241 1 6148.5 0 GLGTDEDSLIEIICSR TPAQYDASELKASMKGLGTDEDSLIEIICS LGTDEDSLIEIICSRTNQELQEINRVYKEM K G L S R T 0 1 0 2 1 0 2 2 0 3 2 0 0 0 0 2 1 0 0 0 0 0 16 0 1776.8564 P07355;A6NMY6 P07355 120 135 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 0.0010635 132.59 By MS/MS 7 0 1 1 41035 41035 0 5190 508 5361 12489 10242 10242 1 644.18 0 GLGTGTLYIAESR LLRQQPDTEAVLNGKGLGTGTLYIAESRLS GKGLGTGTLYIAESRLSWLDGSGLGFSLEY K G L S R L 1 1 0 0 0 0 1 3 0 1 2 0 0 0 0 1 2 0 1 0 0 0 13 0 1336.6987 P54105 P54105 31 43 CLNS1A Methylosome subunit pICln yes yes 2 0.0047619 119.27 By MS/MS 7 0 1 1 53878 0 53878 5191 1042 5362 12490 10243;10244 10243 2 0 97033 GLGVGFGSGGGSSSSVK GLSVGGSGFSASSGRGLGVGFGSGGGSSSS GVGFGSGGGSSSSVKFVSTTSSSRKSFKS_ R G L V K F 0 0 0 0 0 0 0 7 0 0 1 1 0 1 0 5 0 0 0 2 0 0 17 0 1438.7052 CON__P13647;P13647 CON__P13647 560 576 KRT5 Keratin, type II cytoskeletal 5 yes no 2 5.8914E-17 212.68 By MS/MS By MS/MS 5.07 3.15 2 2 2 1 1 1 1 1 1 2 4 10 18032000 3694600 14338000 + 5192 52 5363 12491;12492;12493;12494;12495;12496;12497;12498;12499;12500;12501;12502;12503;12504 10245;10246;10247;10248;10249;10250;10251;10252;10253;10254;10255;10256;10257;10258;10259 10246 15 301590 17223000 GLGVSALCFK DSGIRLWHLVGRGYRGLGVSALCFKSRSRP GRGYRGLGVSALCFKSRSRPGTLKAVTLAG R G L F K S 1 0 0 0 1 0 0 2 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1050.5532 Q9NNW5 Q9NNW5 334 343 WDR6 WD repeat-containing protein 6 yes yes 2 0.033664 80.219 By MS/MS 1.5 0.5 1 1 2 199930 199930 0 5193 2521 5364 12505;12506 10260 10260 1 59702 0 GLGYAQYLPK HADPLLKVSIIPRGKGLGYAQYLPKEQYLY IPRGKGLGYAQYLPKEQYLYTKEQLLDRMC K G L P K E 1 0 0 0 0 1 0 2 0 0 2 1 0 0 1 0 0 0 2 0 0 0 10 0 1108.5917 Q9Y4W6 Q9Y4W6 602 611 AFG3L2 AFG3-like protein 2 yes yes 2 0.0020742 112.17 By MS/MS 5 0 1 1 532280 532280 0 5194 2902 5365 12507 10261 10261 1 5338.5 0 GLHYDIQK EGIRKYDYNPSFAIRGLHYDIQKSLLMKID NPSFAIRGLHYDIQKSLLMKIDAFHYVQLG R G L Q K S 0 0 0 1 0 1 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 972.50288 Q9H857 Q9H857 120 127 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 3 0.022611 116.88 By MS/MS 6 0 1 1 290920 290920 0 5195 2472 5366 12508 10262 10262 1 1999.9 0 GLIEGSAQYR WASFLESLKKNDYFKGLIEGSAQYRERLEM NDYFKGLIEGSAQYRERLEMAENYFQLSVD K G L Y R E 1 1 0 0 0 1 1 2 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1092.5564 O95905 O95905 348 357 ECD Protein SGT1 yes yes 2 0.02441 89.08 By MS/MS 5 0 1 1 1180100 1180100 0 5196 433 5367 12509 10263 10263 1 11835 0 GLIENPALLR LKREYLLQYNDPNRRGLIENPALLRWAYAR DPNRRGLIENPALLRWAYARTINVYPNFRP R G L L R W 1 1 1 0 0 0 1 1 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1094.6448 O95168 O95168 58 67 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 7.1847E-05 155.84 By MS/MS By matching 10 0 2 1 1 3221300 3174900 46425 5197 389 5368 12510;12511 10264 10264 1 171120 59437 GLIPVFALGR RFCNTVHDIVNRGGRGLIPVFALGRAQELL NRGGRGLIPVFALGRAQELLLILDEYWQNH R G L G R A 1 1 0 0 0 0 0 2 0 1 2 0 0 1 1 0 0 0 0 1 0 0 10 0 1041.6335 Q9UKF6 Q9UKF6 236 245 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 2 0.035254 79.451 By MS/MS 5 0 1 1 101720 101720 0 5198 2759 5369 12512 10265 10265 1 1020.2 0 GLIVYQLENQPSEFR ADVIYPMAVVATAERGLIVYQLENQPSEFR GLIVYQLENQPSEFRRIESPLKHQHRCVAI R G L F R R 0 1 1 0 0 2 2 1 0 1 2 0 0 1 1 1 0 0 1 1 0 0 15 0 1791.9155 P78406 P78406 191 205 RAE1 mRNA export factor yes yes 2 5.3249E-07 207.47 By MS/MS 7 0 1 1 217560 217560 0 5199 1223 5370 12513 10266 10266 1 3415.2 0 GLLDVLPK RMLVVAEQPLHAMRKGLLDVLPKNSLEDLT PLHAMRKGLLDVLPKNSLEDLTAEDFRLLV K G L P K N 0 0 0 1 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 8 0 853.5273 O95071 O95071 2657 2664 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.039514 86.472 By MS/MS 1.5 0.5 1 1 2 279280 279280 0 5200 384 5371 12514;12515 10267 10267 1 87264 0 GLLEENDIFR HDGRDGGICIFNGGRGLLEENDIFRNAQAG FNGGRGLLEENDIFRNAQAGVLISTNSHPI R G L F R N 0 1 1 1 0 0 2 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 10 0 1204.6088 Q86XK2 Q86XK2 743 752 FBXO11 F-box only protein 11 yes yes 2 0.001315 117.53 By MS/MS 4.5 0.5 1 1 2 262290 262290 0 5201 1844 5372 12516;12517 10268 10268 1 14620 0 GLLEFEHQR DLLEDRSLLLSVNARGLLEFEHQRAPRVSQ LSVNARGLLEFEHQRAPRVSQGSKDPAEGD R G L Q R A 0 1 0 0 0 1 2 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1127.5724 Q14697 Q14697 174 182 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0023078 117.4 By MS/MS 4 0 1 1 3424400 3424400 0 5202 1454 5373 12518 10269 10269 1 322260 0 GLLEYFK KLMEKEINGSKVTCRGLLEYFKAYIKIYQG NGSKVTCRGLLEYFKAYIKIYQGEDLPHPK R G L F K A 0 0 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 7 0 868.46945 Q6DD88 Q6DD88 320 326 ATL3 Atlastin-3 yes yes 2 0.034662 101.21 By MS/MS 7 0.816 1 1 1 3 1228000 1228000 0 5203 1674 5374 12519;12520;12521 10270 10270 1 9802.6 0 GLLGDAPNDPR AMQRGSLPANVPTPRGLLGDAPNDPRGGTL PTPRGLLGDAPNDPRGGTLLSVTGEVEPRG R G L P R G 1 1 1 2 0 0 0 2 0 0 2 0 0 0 2 0 0 0 0 0 0 0 11 0 1123.5622 P33240;Q9H0L4 P33240 320 330 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant yes no 2 0.0089055 93.598 By MS/MS 5 0 1 1 1012900 1012900 0 5204 801 5375 12522 10271 10271 1 10159 0 GLLLPSSEEPGPAQEASR VLIASLEKSVLGCWKGLLLPSSEEPGPAQE LPSSEEPGPAQEASRLQELLQDCGWKYPDR K G L S R L 2 1 0 0 0 1 3 2 0 0 3 0 0 0 3 3 0 0 0 0 0 0 18 0 1836.9218 Q14674 Q14674 1804 1821 ESPL1 Separin yes yes 2 0.00029696 158.31 By MS/MS 2 0 1 1 359280 359280 0 5205 1449 5376 12523 10272;10273 10272 2 121520 0 GLLLSDYK AERVGLAALIIQDFKGLLLSDYKFSWDRVF LIIQDFKGLLLSDYKFSWDRVFQSRGDTGV K G L Y K F 0 0 0 1 0 0 0 1 0 0 3 1 0 0 0 1 0 0 1 0 0 0 8 0 907.50148 Q5T160 Q5T160 439 446 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.010564 104.21 By MS/MS 6 0 1 1 1216600 1216600 0 5206 1627 5377 12524 10274 10274 1 8363.5 0 GLLLYGPPGTGK IRYPQLFTGILSPWKGLLLYGPPGTGKTLL PWKGLLLYGPPGTGKTLLAKAVATECKTTF K G L G K T 0 0 0 0 0 0 0 4 0 0 3 1 0 0 2 0 1 0 1 0 0 0 12 0 1171.6601 Q8IYT4 Q8IYT4 289 300 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 yes yes 2 0.0020746 112.11 By MS/MS 5.5 1.5 1 1 2 17993000 17993000 0 5207 1889 5378 12525;12526 10275;10276 10275 2 1634200 0 GLLNAIVIK LMKLPSDVVTAVRGKGLLNAIVIKETKDWD TAVRGKGLLNAIVIKETKDWDAWKVCLRLR K G L I K E 1 0 1 0 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 1 0 0 9 0 939.6117 P04181 P04181 375 383 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.00049224 146.94 By MS/MS 6.5 0.5 1 1 2 503930 503930 0 5208 470 5379 12527;12528 10277 10277 1 6880.8 0 GLLPEAGQLAER PGAAHTSSPQPSTSRGLLPEAGQLAERGLS TSRGLLPEAGQLAERGLSPRTASWDQPGTP R G L E R G 2 1 0 0 0 1 2 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 12 0 1252.6776 Q9C0C7 Q9C0C7 1213 1224 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 2 0.018933 85.813 By MS/MS 3 0 1 1 244720 244720 0 5209 2391 5380 12529 10278 10278 1 4477.7 0 GLLPQLLGVAPEK FKKVLRYEGFFGLYRGLLPQLLGVAPEKAI YRGLLPQLLGVAPEKAIKLTVNDFVRDKFM R G L E K A 1 0 0 0 0 1 1 2 0 0 4 1 0 0 2 0 0 0 0 1 0 0 13 0 1333.7969 Q9UJS0 Q9UJS0 393 405 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00044804 137.01 By MS/MS 5.86 1.25 1 2 2 1 1 7 25482000 25482000 0 5210 2748 5381 12530;12531;12532;12533;12534;12535;12536 10279;10280;10281;10282;10283;10284 10282 6 259150 0 GLLQTEPQNNQAK NYRLKEYEKALKYVRGLLQTEPQNNQAKEL VRGLLQTEPQNNQAKELERLIDKAMKKDGL R G L A K E 1 0 2 0 0 3 1 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 13 0 1439.7369 Q9Y3D6 Q9Y3D6 96 108 FIS1 Mitochondrial fission 1 protein yes yes 2 1.1535E-11 238.51 By MS/MS 10 0 1 1 671150 671150 0 5211 2872 5382 12537 10285 10285 1 36172 0 GLLSSLDHTSIR SDLELHPPSYPWSHRGLLSSLDHTSIRRGF SHRGLLSSLDHTSIRRGFQVYKQVCASCHS R G L I R R 0 1 0 1 0 0 0 1 1 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1297.699 P08574 P08574 100 111 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 3.1528E-05 173.24 By MS/MS 8.5 0.5 1 1 2 1950700 1950700 0 5212 525 5383 12538;12539 10286 10286 1 24996 0 GLMELRFLCMDSALR VWTPAAGSCSVSCGRGLMELRFLCMDSALR GLMELRFLCMDSALRVPVQEELCGLASKPG R G L L R V 1 2 0 1 1 0 1 1 0 0 4 0 2 1 0 1 0 0 0 0 0 0 15 1 1810.8892 Q76LX8 Q76LX8 911 925 ADAMTS13 A disintegrin and metalloproteinase with thrombospondin motifs 13 yes yes 4 0.052307 53.001 By MS/MS 6.5 0.5 1 1 2 5235300 5235300 0 5213 1753 5384 12540;12541 10287 10287 925 1 39849 0 GLNIFAVEVGPK IHISNELSKNCINNRGLNIFAVEVGPKSTM NNRGLNIFAVEVGPKSTMVCQHVMPLNERQ R G L P K S 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 0 0 0 2 0 0 12 0 1242.6972 A8K855 A8K855 591 602 EFCAB7 EF-hand calcium-binding domain-containing protein 7 yes yes 2 0.0086637 92.866 By MS/MS 5 0 1 1 139560 139560 0 5214 29 5385 12542 10288 10288 1 1399.7 0 GLNISAVR LPYDVTEESIKEFFRGLNISAVRLPREPSN SIKEFFRGLNISAVRLPREPSNPERLKGFG R G L V R L 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 828.48175 P23588 P23588 118 125 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0073734 114.5 By MS/MS 7 1.41 1 1 1 1 1 5 20059000 20059000 0 5215 708 5386 12543;12544;12545;12546;12547 10289;10290;10291;10292 10289 4 205520 0 GLNNLLDENR EKQLLGEHLTAILQKGLNNLLDENRIQDLS AILQKGLNNLLDENRIQDLSLLYQLFSRVR K G L N R I 0 1 3 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1156.5836 Q13620 Q13620 460 469 CUL4B Cullin-4B yes yes 2 0.00026107 142.98 By MS/MS 4 0 1 1 745460 745460 0 5216 1405 5387 12548 10293 10293 1 70152 0 GLPGLLSPR NPGRGDTWDFRTLLRGLPGLLSPREPLAVH FRTLLRGLPGLLSPREPLAVHTWAPTPQGL R G L P R E 0 1 0 0 0 0 0 2 0 0 3 0 0 0 2 1 0 0 0 0 0 0 9 0 908.54435 Q86YV9 Q86YV9 257 265 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.053906 74.255 By MS/MS 5 0 1 1 340470 340470 0 5217 1856 5388 12549 10294 10294 1 3414.7 0 GLPLVDDGGWNTVPISK SDKRRGGPPGPPISRGLPLVDDGGWNTVPI PLVDDGGWNTVPISKGSRPIDTSRLTKITK R G L S K G 0 0 1 2 0 0 0 3 0 1 2 1 0 0 2 1 1 1 0 2 0 0 17 0 1766.9203 Q04637 Q04637 1043 1059 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.000104 188.09 By MS/MS 3.6 1.36 2 1 2 5 1265600 1265600 0 5218 1291 5389 12550;12551;12552;12553;12554 10295;10296;10297;10298;10299;10300;10301 10297 7 243210 0 GLPWSCSADEVQR MLGTEGGEGFVVKVRGLPWSCSADEVQRFF VRGLPWSCSADEVQRFFSDCKIQNGAQGIR R G L Q R F 1 1 0 1 1 1 1 1 0 0 1 0 0 0 1 2 0 1 0 1 0 0 13 0 1503.6776 P31943 P31943 17 29 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 2 3.798E-05 180.19 By MS/MS 6 0 1 1 6128700 6128700 0 5219 791 5390 12555 10302 10302 1 42130 0 GLQDVLR ARAQAALAVNISAARGLQDVLRTNLGPKGT AVNISAARGLQDVLRTNLGPKGTMKMLVSG R G L L R T 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 799.4552 P40227;Q92526 P40227 29 35 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 0.017023 117.16 By MS/MS By matching 6 0.707 1 2 1 3 1 45112000 44958000 154550 5220 858 5391 12556;12557;12558;12559 10303;10304 10304 2 353440 158370 GLQEGYENSR VNEPYYNEAGFDSDRGLQEGYENSRCYNEM FDSDRGLQEGYENSRCYNEMALIRVVQSMT R G L S R C 0 1 1 0 0 1 2 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1151.5207 Q9C0C9 Q9C0C9 1089 1098 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 2 0.0017799 112.83 By MS/MS 2 0 1 1 263210 263210 0 5221 2392 5392 12560 10305 10305 1 89027 0 GLQELTDAR LAKCRKKKKLFAPWRGLQELTDARRVELKK LFAPWRGLQELTDARRVELKKRVDDYVRRH R G L A R R 1 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1001.5142 Q15051 Q15051 446 454 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.051009 75.509 By MS/MS 5 0 1 1 543720 543720 0 5222 1482 5393 12561 10306 10306 1 5453.2 0 GLQEQLSQER KELQLVLAEAHDSLRGLQEQLSQERQLRKE HDSLRGLQEQLSQERQLRKEEADNFNQKMV R G L E R Q 0 1 0 0 0 3 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1186.5942 O94964 O94964 598 607 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 2 0.044383 75.043 By MS/MS By matching 4 0 2 1 1 4558500 4505800 52766 5223 378 5394 12562;12563 10307 10307 1 424020 112430 GLRKPEVGGVIR ______________________________ AARGLRKPEVGGVIRAIVRAGLAMPGPPLG R G L I R A 0 2 0 0 0 0 1 3 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 2 1279.7725 Q9Y3B7 Q9Y3B7 10 21 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 0.0064558 96.067 By MS/MS 9 0 1 1 1747300 1747300 0 5224 2866 5395 12564 10308 10308 1 34388 0 GLSEDVSISK PHLAREFMIKTRRRKGLSEDVSISKFFDDP TRRRKGLSEDVSISKFFDDPMLLELAKQDV K G L S K F 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 3 0 0 0 1 0 0 10 0 1033.5292 Q15029 Q15029 942 951 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0044249 106.88 By MS/MS 3.5 0.5 1 1 2 1859400 1859400 0 5225 1476 5396 12565;12566 10309 10309 1 88716 0 GLSIEQLTTLAEK VAEVLSWQFSSTTKRGLSIEQLTTLAEKLL KRGLSIEQLTTLAEKLLGPGVNYSGCQITW R G L E K L 1 0 0 0 0 1 2 1 0 1 3 1 0 0 0 1 2 0 0 0 0 0 13 0 1401.7715 P40763 P40763 519 531 STAT3 Signal transducer and activator of transcription 3 yes yes 2 8.2462E-12 241.31 By MS/MS 4.5 0.5 1 1 2 637640 637640 0 5226 861 5397 12567;12568 10310 10310 1 27772 0 GLSIIGVQQIDR AGCVPQAQPRQDYLKGLSIIGVQQIDRVVE YLKGLSIIGVQQIDRVVEVVEETIKGHSVR K G L D R V 0 1 0 1 0 2 0 2 0 3 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1297.7354 Q5VV42 Q5VV42 151 162 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 1.1726E-08 213.35 By MS/MS 6 0 1 1 1667100 1667100 0 5227 1652 5398 12569 10311 10311 1 11460 0 GLSQSALPYR ______________________________ HAPGKGLSQSALPYRRSVPTWLKLTSDDVK K G L Y R R 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 2 0 0 1 0 0 0 10 0 1090.5771 P62277 P62277 10 19 RPS13 40S ribosomal protein S13 yes yes 2 0.0079202 99.013 By MS/MS By matching 9.33 0.471 2 1 2 1 50897000 50755000 141480 5228 1151 5399 12570;12571;12572 10312;10313 10312 2 1296100 322610 GLSSLLYGSIPK VRQTVRSHGVLGLYRGLSSLLYGSIPKAAV LYRGLSSLLYGSIPKAAVRFGMFEFLSNHM R G L P K A 0 0 0 0 0 0 0 2 0 1 3 1 0 0 1 3 0 0 1 0 0 0 12 0 1233.6969 P53007 P53007 86 97 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0012741 120.06 By MS/MS 8 0 1 1 1519200 1519200 0 5229 1026 5400 12573 10314 10314 1 19180 0 GLSTESILIPR NLEALEDFEKAAGARGLSTESILIPRQSET AGARGLSTESILIPRQSETCSPGSD_____ R G L P R Q 0 1 0 0 0 0 1 1 0 2 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1184.6765 P31025;Q5VSP4 P31025 156 166 LCN1;LCN1P1 Lipocalin-1;Putative lipocalin 1-like protein 1 yes no 2 6.5925E-06 176.38 By MS/MS By MS/MS 6.3 3.29 1 1 1 1 1 1 2 2 4 6 3781400 2277600 1503800 5230 782 5401 12574;12575;12576;12577;12578;12579;12580;12581;12582;12583 10315;10316;10317;10318;10319;10320;10321;10322 10321 8 91664 1862100 GLTEQEVETILDK YLSLFIDDKLKKGVKGLTEQEVETILDKAM VKGLTEQEVETILDKAMVLFRFMQEKDVFE K G L D K A 0 0 0 1 0 1 3 1 0 1 2 1 0 0 0 0 2 0 0 1 0 0 13 0 1473.7563 Q13618 Q13618 402 414 CUL3 Cullin-3 yes yes 2 0.00015442 167.71 By MS/MS 4 0 1 1 307590 307590 0 5231 1404 5402 12584 10323 10323 1 28946 0 GLTPSQIGVILR TSDDVKEQIYKLAKKGLTPSQIGVILRDSH AKKGLTPSQIGVILRDSHGVAQVRFVTGNK K G L L R D 0 1 0 0 0 1 0 2 0 2 2 0 0 0 1 1 1 0 0 1 0 0 12 0 1252.7503 P62277 P62277 44 55 RPS13 40S ribosomal protein S13 yes yes 2 1.4592E-05 178.54 By MS/MS 9.5 0.5 1 1 2 7155600 7155600 0 5232 1151 5403 12585;12586 10324;10325 10325 2 202910 0 GLTSVINQK ENEVFLSLPCILNARGLTSVINQKLKDDEV CILNARGLTSVINQKLKDDEVAQLKKSADT R G L Q K L 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 P07195 P07195 300 308 LDHB L-lactate dehydrogenase B chain yes yes 2 0.0022215 118.5 By MS/MS 7.5 0.5 1 1 2 6468900 6468900 0 5233 506 5404 12587;12588 10326;10327 10326 2 94256 0 GLVGEIIK LERTFIAIKPDGVQRGLVGEIIKRFEQKGF KPDGVQRGLVGEIIKRFEQKGFRLVAMKFL R G L I K R 0 0 0 0 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 827.51165 P22392;P15531 P22392 19 26 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 2 0.0071659 115.46 By MS/MS 9.5 0.5 1 1 2 1403300 1403300 0 5234 692;625 5405 12589;12590 10328 10328 1 65164 0 GLVGEIIKR LERTFIAIKPDGVQRGLVGEIIKRFEQKGF PDGVQRGLVGEIIKRFEQKGFRLVAMKFLR R G L K R F 0 1 0 0 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 1 983.61277 P22392;P15531 P22392 19 27 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 2 0.00021699 169.06 By MS/MS 9.5 0.5 1 1 2 2810100 2810100 0 5235 692;625 5406 12591;12592 10329 10329 1 117770 0 GLVGIEFKEK PVSNLRLPVEEAYKRGLVGIEFKEKLLSAE EAYKRGLVGIEFKEKLLSAERAVTGYNDPE R G L E K L 0 0 0 0 0 0 2 2 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1118.6336 P15924 P15924 2319 2328 DSP Desmoplakin yes yes 2;3 7.7918E-05 159.28 By MS/MS By MS/MS 2.75 1.3 2 1 3 1 1 5 3 5750500 1743900 4006600 5236 628 5407 12593;12594;12595;12596;12597;12598;12599;12600 10330;10331;10332 10330 3 274360 601060 GLVGNPLPSVR VNALLPTETFIPVIRGLVGNPLPSVRRKAL PVIRGLVGNPLPSVRRKALDLLNNKLQQNI R G L V R R 0 1 1 0 0 0 0 2 0 0 2 0 0 0 2 1 0 0 0 2 0 0 11 0 1107.64 Q9H583 Q9H583 1606 1616 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.0176 86.898 By MS/MS 2 0 1 1 570490 570490 0 5237 2451 5408 12601 10333 10333 1 192960 0 GLVHAAGPGQDSGSQAGSPPTR SRQQRDLHNLMVDLRGLVHAAGPGQDSGSQ PGQDSGSQAGSPPTRDRDVDVLSAALKEQL R G L T R D 3 1 0 1 0 2 0 5 1 0 1 0 0 0 3 3 1 0 0 1 0 0 22 0 2045.9879 Q96ER9 Q96ER9 271 292 CCDC51 Coiled-coil domain-containing protein 51 yes yes 3 3.5888E-06 141.74 By MS/MS 7 0 1 1 1106900 1106900 0 5238 2149 5409 12602 10334 10334 1 17377 0 GLVLDHGAR MEMKHKSETDTSLIRGLVLDHGARHPDMKK DTSLIRGLVLDHGARHPDMKKRVEDAYILT R G L A R H 1 1 0 1 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 936.51411 P40227 P40227 209 217 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.00010134 161.9 By MS/MS 6.5 1.12 1 1 1 1 4 28672000 28672000 0 5239 858 5410 12603;12604;12605;12606 10335;10336 10335 2 220510 0 GLVLGPIHK GLKGRLDYLSSLKVKGLVLGPIHKNQKDDV SSLKVKGLVLGPIHKNQKDDVAQTDLLQID K G L H K N 0 0 0 0 0 0 0 2 1 1 2 1 0 0 1 0 0 0 0 1 0 0 9 0 932.58074 P08195 P08195 258 266 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0025736 114.02 By MS/MS 4.5 0.5 1 1 2 5938000 5938000 0 5240 519 5411 12607;12608 10337;10338 10338 2 198210 0 GLVQALQTK LSERAALQEELQLCKGLVQALQTKVTQQGL ELQLCKGLVQALQTKVTQQGLKMVVPGLDG K G L T K V 1 0 0 0 0 2 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 P49327 P49327 1143 1151 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 7.8064E-05 166.3 By MS/MS By MS/MS 4.22 2.3 1 2 1 1 1 1 1 1 8 1 31025000 30870000 154970 5241 946 5412 12609;12610;12611;12612;12613;12614;12615;12616;12617 10339;10340;10341;10342;10343;10344 10340 6 6165900 219160 GLVVPVIR YRDYIDISVAVATPRGLVVPVIRNVEAMNF VAVATPRGLVVPVIRNVEAMNFADIERTIT R G L I R N 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 3 0 0 8 0 851.55927 P36957 P36957 326 333 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.024481 94.669 By MS/MS By matching 6.33 0.471 2 1 2 1 8031200 7867000 164280 5242 842 5413 12618;12619;12620 10345 10345 1 57698 168340 GLVYETSVLDPDEGIR QITVDMMYGGMRGMKGLVYETSVLDPDEGI LVYETSVLDPDEGIRFRGFSIPECQKLLPK K G L I R F 0 1 0 2 0 0 2 2 0 1 2 0 0 0 1 1 1 0 1 2 0 0 16 0 1761.8785 O75390 O75390 77 92 CS Citrate synthase, mitochondrial yes yes 2 0.00041989 177.16 By MS/MS 7.5 0.5 1 1 2 3870100 3870100 0 5243 321 5414 12621;12622 10346 10346 1 60077 0 GMDKLIVDGR CQVIAEAVRTTLGPRGMDKLIVDGRGKATI TLGPRGMDKLIVDGRGKATISNDGATILKL R G M G R G 0 1 0 2 0 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 0 0 10 1 1102.5805 Q99832 Q99832 44 53 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.0041533 117.71 By MS/MS 6 0 2 2 13251000 13251000 0 5244 2270 5415 12623;12624 10347;10348 10348 2 91089 0 GMFTAEDLR HPYDAAKDSILRRARGMFTAEDLR______ ILRRARGMFTAEDLR_______________ R G M L R - 1 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 9 0 1038.4804 Q16864 Q16864 111 119 ATP6V1F V-type proton ATPase subunit F yes yes 2 0.00083989 136.27 By MS/MS 10 0 2 2 287060 287060 0 5245 1562 5416;5417 12625;12626 10349;10350 10349 877 2 15472 0 GMGGLFSVGETTAK YTIRRGPAGIGRTGRGMGGLFSVGETTAKV RGMGGLFSVGETTAKVLKDEIDVKFKDVAG R G M A K V 1 0 0 0 0 0 1 4 0 0 1 1 1 1 0 1 2 0 0 1 0 0 14 0 1353.6599 Q9Y4W6 Q9Y4W6 284 297 AFG3L2 AFG3-like protein 2 yes yes 2 0.00048113 174.57 By MS/MS 5 0 2 2 1689900 1689900 0 5246 2902 5418;5419 12627;12628 10351;10352 10352 1208 2 16949 0 GMGLSLMR RPLWFICSGMGTQWRGMGLSLMRLDRFRDS GMGTQWRGMGLSLMRLDRFRDSILRSDEAV R G M M R L 0 1 0 0 0 0 0 2 0 0 2 0 2 0 0 1 0 0 0 0 0 0 8 0 863.43573 P49327 P49327 505 512 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0018107 145.04 By MS/MS 2.57 0.728 4 2 1 7 4740500 4740500 0 5247 946 5420;5421;5422 12629;12630;12631;12632;12633;12634;12635 10353;10354;10355;10356 10356 502;503 4 1458200 0 GMIDGSTPTITPNPNFR NALLEPGGVLTISERGMIDGSTPTITPNPN IDGSTPTITPNPNFRLFLSMDPVHGDISRA R G M F R L 0 1 2 1 0 0 0 2 0 2 0 0 1 1 3 1 3 0 0 0 0 0 17 0 1816.8778 Q9NU22 Q9NU22 2271 2287 MDN1 Midasin yes yes 2 0.00075845 120.84 By MS/MS 1.5 0.5 1 1 2 692890 692890 0 5248 2580 5423 12636;12637 10357 10357 1116 1 201040 0 GMSIDQALAQLEFNDK KYSKDKMWYLAKLIRGMSIDQALAQLEFND MSIDQALAQLEFNDKKGAKIIKEVLLEAQD R G M D K K 2 0 1 2 0 2 1 1 0 1 2 1 1 1 0 1 0 0 0 0 0 0 16 0 1778.8509 Q9NWU5 Q9NWU5 90 105 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.00036991 143.56 By MS/MS 9 0 1 1 78789 78789 0 5249 2614 5424 12638 10358 10358 1123 1 1550.6 0 GMSLNLEPDNVGVVVFGNDK NVQAEEMVEFSSGLKGMSLNLEPDNVGVVV LEPDNVGVVVFGNDKLIKEGDIVKRTGAIV K G M D K L 0 0 3 2 0 0 1 3 0 0 2 1 1 1 1 1 0 0 0 4 0 0 20 0 2103.0307 P25705 P25705 104 123 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.5028E-35 304.03 By MS/MS By matching 6 0 2 1 1 3132100 3070700 61346 5250 723 5425 12639;12640 10359 10359 359 1 21109 62863 GMSSKEIYDDSFIR KTAAVANSMNYLTKKGMSSKEIYDDSFIRP KGMSSKEIYDDSFIRPVTFWIVGDFDSPSG K G M I R P 0 1 0 2 0 0 1 1 0 2 0 1 1 1 0 3 0 0 1 0 0 0 14 1 1646.761 Q9NYU2 Q9NYU2 746 759 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 0.033878 98.754 By MS/MS 10 0 1 1 774580 774580 0 5251 2638 5426 12641 10360 10360 1 41747 0 GNAAVLDYCR AKREGPPFISEAAVRGNAAVLDYCRTSVSA EAAVRGNAAVLDYCRTSVSALSGATAGILG R G N C R T 2 1 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 10 0 1137.5237 Q9BV81 Q9BV81 21 30 EMC6 ER membrane protein complex subunit 6 yes yes 2 3.1545E-05 160.36 By MS/MS 10 0 1 1 8087700 8087700 0 5252 2330 5427 12642 10361 10361 1 435900 0 GNAAWQEQLK NSLSLADLCVWATLKGNAAWQEQLKQKKAP WATLKGNAAWQEQLKQKKAPVHVKRWFGFL K G N L K Q 2 0 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1143.5673 P07814 P07814 130 139 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.8131E-07 183.43 By MS/MS 3 0 1 1 2916200 2916200 0 5253 512 5428 12643 10362 10362 1 53359 0 GNAGQSNYGFANSAMER ELDYFVVFSSVSCGRGNAGQSNYGFANSAM AGQSNYGFANSAMERICEKRRHEGLPGLAV R G N E R I 3 1 3 0 0 1 1 3 0 0 0 0 1 1 0 2 0 0 1 0 0 0 17 0 1772.7536 P49327 P49327 2027 2043 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.1141E-33 308.68 By MS/MS 2.78 1.31 2 2 2 2 1 9 15462000 15462000 0 5254 946 5429;5430 12644;12645;12646;12647;12648;12649;12650;12651;12652 10363;10364;10365;10366;10367;10368 10365 504 6 3986100 0 GNAPEGLPQLMEVVR FHTIETLMRINAHSRGNAPEGLPQLMEVVR GNAPEGLPQLMEVVRSNYEAMIDRAHGGPN R G N V R S 1 1 1 0 0 1 2 2 0 0 2 0 1 0 2 0 0 0 0 2 0 0 15 0 1608.8294 A5YKK6 A5YKK6 1800 1814 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.034753 75.89 By MS/MS 2 0 1 1 83998 83998 0 5255 19 5431 12653 10369;10370 10370 2 28411 0 GNCLPPLPLPR NRSLDRAKMAVIEYKGNCLPPLPLPRRDSH IEYKGNCLPPLPLPRRDSHLTLLNQLLQGL K G N P R R 0 1 1 0 1 0 0 1 0 0 3 0 0 0 4 0 0 0 0 0 0 0 11 0 1232.67 Q9NRX2 Q9NRX2 127 137 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.023148 83.998 By MS/MS 9 0 1 1 1283900 1283900 0 5256 2561 5432 12654 10371 10371 1 25268 0 GNDPNVNIVPK MPPPANLPSLKAENKGNDPNVNIVPKDGTG AENKGNDPNVNIVPKDGTGWASKQEQHEEE K G N P K D 0 0 3 1 0 0 0 1 0 1 0 1 0 0 2 0 0 0 0 2 0 0 11 0 1165.6091 Q9Y520 Q9Y520 69 79 PRRC2C Protein PRRC2C yes yes 2 0.0002647 137.46 By MS/MS 1.5 0.5 1 1 2 731830 731830 0 5257 2905 5433 12655;12656 10372;10373 10373 2 211050 0 GNDTFVTLDEILR ATDIHLGFMEKDAVRGNDTFVTLDEILRLA VRGNDTFVTLDEILRLAQENEVDFILLGGD R G N L R L 0 1 1 2 0 0 1 1 0 1 2 0 0 1 0 0 2 0 0 1 0 0 13 0 1491.7569 P49959 P49959 33 45 MRE11A Double-strand break repair protein MRE11A yes yes 2 2.3843E-05 186.46 By MS/MS 4.5 0.5 1 1 2 160640 160640 0 5258 970 5434 12657;12658 10374;10375;10376 10375 3 6560.7 0 GNDTPLALESTNTEK LEESKEMDIKRKENKGNDTPLALESTNTEK GNDTPLALESTNTEKETSLEETKIGEILIQ K G N E K E 1 0 2 1 0 0 2 1 0 0 2 1 0 0 1 1 3 0 0 0 0 0 15 0 1588.758 Q7Z6Z7 Q7Z6Z7 1719 1733 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.036052 74.987 By MS/MS 1.5 0.5 1 1 2 287460 287460 0 5259 1802 5435 12659;12660 10377 10377 0 85742 0 GNEEAQIFRPLK VDQPIVKTATITEPRGNEEAQIFRPLKFNT EPRGNEEAQIFRPLKFNTTSVIKIAVEPVN R G N L K F 1 1 1 0 0 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 12 1 1400.7412 Q15029 Q15029 570 581 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00024351 167.67 By MS/MS 4.5 1.12 1 1 1 1 4 3355500 3355500 0 5260 1476 5436 12661;12662;12663;12664 10378;10379 10378 2 192130 0 GNEIVLSAGSTPR VGEPTYDAEFQHFLRGNEIVLSAGSTPRIQ LRGNEIVLSAGSTPRIQGLTVEQAEAVVRL R G N P R I 1 1 1 0 0 0 1 2 0 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1299.6783 Q14204 Q14204 3911 3923 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.348E-24 282.21 By MS/MS 3 1.41 1 1 1 1 1 5 9903700 9903700 0 5261 1433 5437 12665;12666;12667;12668;12669 10380;10381;10382;10383;10384 10381 5 2023700 0 GNELESIAFR RFESRDSCLRALTSRGNELESIAFRSEDIT ALTSRGNELESIAFRSEDITGQLGNNDDLI R G N F R S 1 1 1 0 0 0 2 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1134.5669 Q86US8 Q86US8 1332 1341 SMG6 Telomerase-binding protein EST1A yes yes 2 0.00044334 144.77 By MS/MS 2.5 0.5 1 1 2 485790 485790 0 5262 1824 5438 12670;12671 10385 10385 1 38008 0 GNEVLYNGFTGR QKISNLLSDYGYHLRGNEVLYNGFTGRKIT HLRGNEVLYNGFTGRKITSQIFIGPTYYQR R G N G R K 0 1 2 0 0 0 1 3 0 0 1 0 0 1 0 0 1 0 1 1 0 0 12 0 1325.6364 P30876 P30876 1024 1035 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 3.2195E-06 193.3 By MS/MS 3 0 1 1 326800 326800 0 5263 781 5439 12672 10386 10386 1 5979.5 0 GNFEHLTEK VVSTKTPDRKLIFGKGNFEHLTEKIRGSPD KLIFGKGNFEHLTEKIRGSPDITCVFLNVE K G N E K I 0 0 1 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1073.5142 O43824 O43824 156 164 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0012302 125.71 By MS/MS 6 0 1 1 2452200 2452200 0 5264 240 5440 12673 10387;10388 10388 2 16857 0 GNFLEIK RYAILNEPFKGEMNRGNFLEIKNKFLARRF PFKGEMNRGNFLEIKNKFLARRFKLLEQAL R G N I K N 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 0 819.44905 Q14839 Q14839 1772 1778 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.030472 104.37 By MS/MS 2 0 1 1 501470 501470 0 5265 1459 5441 12674 10389 10389 1 169620 0 GNFNYIEFTR EEVDELYREAPIDKKGNFNYIEFTRILKHG PIDKKGNFNYIEFTRILKHGAKDKDD____ K G N T R I 0 1 2 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 10 0 1259.5935 P19105;O14950 P19105 151 160 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2 1.2908E-07 189.18 By MS/MS 9.5 0.5 1 1 2 2484200 2484200 0 5266 148 5442 12675;12676 10390;10391 10390 2 57646 0 GNHECASINR LAYKIKYPENFFLLRGNHECASINRIYGFY FFLLRGNHECASINRIYGFYDECKRRYNIK R G N N R I 1 1 2 0 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 10 0 1156.5044 P36873;P62136;P62140 P62136 123 132 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2;3 0.00035642 144.65 By MS/MS 7.5 0.5 2 2 4 3133000 3133000 0 5267 1139;840;1140 5443 12677;12678;12679;12680 10392;10393;10394 10393 3 42865 0 GNIVKHPLTQELK ESMVEHLSRDIDVIRGNIVKHPLTQELKEC IRGNIVKHPLTQELKECEGIVPVPLAEKLY R G N L K E 0 0 1 0 0 1 1 1 1 1 2 2 0 0 1 0 1 0 0 1 0 0 13 1 1475.846 P82932 P82932 91 103 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 3 0.010029 87.216 By MS/MS 10 0 1 1 978250 978250 0 5268 1238 5444 12681 10395 10395 1 52724 0 GNKPWISLPR NSFATRLSNIFVIGKGNKPWISLPRGKGIR FVIGKGNKPWISLPRGKGIRLTIAEERDKR K G N P R G 0 1 1 0 0 0 0 1 0 1 1 1 0 0 2 1 0 1 0 0 0 0 10 1 1166.656 P62701 P62701 231 240 RPS4X 40S ribosomal protein S4, X isoform yes yes 3 0.00024629 135.43 By MS/MS 8 0 1 1 2778400 2778400 0 5269 1165 5445 12682 10396 10396 1 35077 0 GNKYSAQGER AAELSLLEKSLGLSKGNKYSAQGERQIPVL LGLSKGNKYSAQGERQIPVLQTNNGPSLTG K G N E R Q 1 1 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 10 1 1108.5261 O43324 O43324 19 28 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2;3 0.0057875 120.31 By MS/MS 9.33 0.471 2 1 3 2666900 2666900 0 5270 204 5446 12683;12684;12685 10397;10398 10397 2 59433 0 GNLANVIR VVRIPKEQGVLSFWRGNLANVIRYFPTQAL GVLSFWRGNLANVIRYFPTQALNFAFKDKY R G N I R Y 1 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 855.49265 P05141;Q9H0C2;P12235;P12236 P05141 73 80 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0010234 145.04 By MS/MS 1 0 1 1 0 0 0 5271 487;589;588 5447 12686 10399 10399 1 0 0 GNLASYPIDELVDR GCLNACTYCKTKHARGNLASYPIDELVDRA RGNLASYPIDELVDRAKQSFQEGVCEIWLT R G N D R A 1 1 1 2 0 0 1 1 0 1 2 0 0 0 1 1 0 0 1 1 0 0 14 0 1560.7784 Q5VV42 Q5VV42 228 241 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 9.584E-05 179.59 By MS/MS 6 0.816 1 1 1 3 10171000 10171000 0 5272 1652 5448 12687;12688;12689 10400;10401 10400 2 73271 0 GNLGVYQETR RLDRLSGLADQMVARGNLGVYQETRERLAM QMVARGNLGVYQETRERLAMRLKGLGCQTL R G N T R E 0 1 1 0 0 1 1 2 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1135.5622 O95400 O95400 213 222 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 0.00033471 137.98 By MS/MS 6.5 0.5 1 1 2 2203400 2203400 0 5273 409 5449 12690;12691 10402 10402 1 16661 0 GNNLQDTLR VPAVQGFFRSISLSRGNNLQDTLRVLTLWF SISLSRGNNLQDTLRVLTLWFDYGHWPDVN R G N L R V 0 1 2 1 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1029.5203 P42345 P42345 1897 1905 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0019197 122.33 By MS/MS 2.5 0.5 1 1 2 1319100 1319100 0 5274 879 5450 12692;12693 10403 10403 1 335650 0 GNNVYCLDR IIRTLDLPIYVTRVKGNNVYCLDRECRPRV YVTRVKGNNVYCLDRECRPRVLTIDPTEFK K G N D R E 0 1 2 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1109.4924 P53621 P53621 575 583 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0016451 125.82 By MS/MS 3 0 1 1 662790 662790 0 5275 1034 5451 12694 10404 10404 1 12127 0 GNPTVEVDLFTSK MSILKIHAREIFDSRGNPTVEVDLFTSKGL SRGNPTVEVDLFTSKGLFRAAVPSGASTGI R G N S K G 0 0 1 1 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1405.7089 P06733 P06733 16 28 ENO1 Alpha-enolase yes yes 2 9.3641E-05 174.23 By MS/MS 7 0.816 1 1 1 3 9234600 9234600 0 5276 500 5452 12695;12696;12697 10405 10405 1 67251 0 GNQLEICAVVLR TFPGCLADQLVLKRRGNQLEICAVVLRQLS KRRGNQLEICAVVLRQLSPHKYYFLVGYSE R G N L R Q 1 1 1 0 1 1 1 1 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1370.734 Q96EL2 Q96EL2 114 125 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 6.3332E-13 242.49 By MS/MS 10 0 1 1 178510 178510 0 5277 2145 5453 12698 10406 10406 1 9621.1 0 GNSLFFR IDCWCMLQKEGNMSRGNSLFFRKVPFGKTY QKEGNMSRGNSLFFRKVPFGKTYCCDLKML R G N F R K 0 1 1 0 0 0 0 1 0 0 1 0 0 2 0 1 0 0 0 0 0 0 7 0 839.42899 Q9Y6C9 Q9Y6C9 281 287 MTCH2 Mitochondrial carrier homolog 2 yes yes 2 0.006926 147.69 By MS/MS 8 0 1 1 563090 563090 0 5278 2938 5454 12699 10407 10407 1 7108.9 0 GNSLQEILER VEVKKSQHKYVIGPKGNSLQEILERTGVSV VIGPKGNSLQEILERTGVSVEIPPSDSISE K G N E R T 0 1 1 0 0 1 2 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1157.6041 Q00341 Q00341 315 324 HDLBP Vigilin yes yes 2 1.3082E-07 188.99 By MS/MS 3 1.41 1 1 1 1 1 5 3530400 3530400 0 5279 1260 5455 12700;12701;12702;12703;12704 10408;10409;10410 10409 3 192960 0 GNSLTLIDLPGHESLR SITDSCAVYRVNNNRGNSLTLIDLPGHESL NSLTLIDLPGHESLRLQFLERFKSSARAIV R G N L R L 0 1 1 1 0 0 1 2 1 1 4 0 0 0 1 2 1 0 0 0 0 0 16 0 1720.9108 Q9Y5M8 Q9Y5M8 110 125 SRPRB Signal recognition particle receptor subunit beta yes yes 2;3 0.00051734 174.94 By MS/MS 8.33 0.471 2 1 3 7384500 7384500 0 5280 2917 5456 12705;12706;12707 10411;10412 10412 2 93907 0 GNSLTVLDVLEGR KEFSHKNWLVFYKEKGNSLTVLDVLEGRTH EKGNSLTVLDVLEGRTHTISLPINLKTVFL K G N G R T 0 1 1 1 0 0 1 2 0 0 3 0 0 0 0 1 1 0 0 2 0 0 13 0 1371.7358 A3KMH1 A3KMH1 1247 1259 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0010726 153.54 By MS/MS 2 0 1 1 91382 91382 0 5281 14 5457 12708 10413 10413 1 30909 0 GNVFAVEAENR VTNKERTELLPKTERGNVFAVEAENREMSK KTERGNVFAVEAENREMSKTSGRLNNGIPQ R G N N R E 2 1 2 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 11 0 1204.5836 Q9H6S0 Q9H6S0 151 161 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.00081749 125.23 By MS/MS 3 0 1 1 430500 430500 0 5282 2458 5458 12709 10414 10414 1 7876.9 0 GNVLVLSQHK HGRPEDKSKIVAEIRGNVLVLSQHKFASNV VAEIRGNVLVLSQHKFASNVVEKCVTHASR R G N H K F 0 0 1 0 0 1 0 1 1 0 2 1 0 0 0 1 0 0 0 2 0 0 10 0 1093.6244 Q14671 Q14671 1067 1076 PUM1 Pumilio homolog 1 yes yes 2 0.0010339 122.96 By MS/MS 3.5 0.5 1 1 2 1485500 1485500 0 5283 1448 5459 12710;12711 10415 10415 1 55704 0 GPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ K G P Q K N 2 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 7 0 683.39662 P35527;CON__P35527 P35527 193 199 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0067532 148.4 By MS/MS By MS/MS 5.11 2.98 2 2 3 2 2 1 1 1 2 2 8 10 21045000 11750000 9295800 + 5284 822 5460 12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723;12724;12725;12726;12727;12728;12729 10416;10417;10418;10419;10420;10421;10422;10423;10424;10425;10426;10427;10428;10429;10430;10431;10432 10427 17 976050 6512600 GPAEESSSWR EDRFRRPRDEGGWRRGPAEESSSWRDSSRR GGWRRGPAEESSSWRDSSRRDDRDRDDRRR R G P W R D 1 1 0 0 0 0 2 1 0 0 0 0 0 0 1 3 0 1 0 0 0 0 10 0 1104.4836 Q14152 Q14152 1251 1260 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00033344 138.06 By MS/MS 2.5 0.5 1 1 2 2761500 2761500 0 5285 1422 5461 12730;12731 10433 10433 1 70067 0 GPAGDATVASEK PVPTEEGNPLLKHYRGPAGDATVASEKESV HYRGPAGDATVASEKESVM___________ R G P E K E 3 0 0 1 0 0 1 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 12 0 1101.5302 Q15758 Q15758 526 537 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.0020119 125.68 By MS/MS 9.5 0.5 1 1 2 233000 233000 0 5286 1530 5462 12732;12733 10434 10434 0 7517.9 0 GPAGLGPR TRGPPRGGPGGELPRGPAGLGPRRSQQGPR PGGELPRGPAGLGPRRSQQGPRKEPRKIIA R G P P R R 1 1 0 0 0 0 0 3 0 0 1 0 0 0 2 0 0 0 0 0 0 0 8 0 723.40277 Q04637 Q04637 695 702 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0066054 118.06 By MS/MS 2.5 1.12 1 1 1 1 4 13195000 13195000 0 5287 1291 5463 12734;12735;12736;12737 10435;10436;10437;10438 10437 4 3626400 0 GPALINIQEYPIER QKLLCPVETHHIDIKGPALINIQEYPIERH KGPALINIQEYPIERHEERSLNFTEECASW K G P E R H 1 1 1 0 0 1 2 1 0 3 1 0 0 0 2 0 0 0 1 0 0 0 14 0 1611.8621 A3KMH1 A3KMH1 1076 1089 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00040926 178.95 By MS/MS 2 0 1 1 159150 159150 0 5288 14 5464 12738 10439 10439 1 53831 0 GPAPQDQAGPGGAPR FRIFIIWAISSWFRRGPAPQDQAGPGGAPR GPAPQDQAGPGGAPRVASRNLFPKDTLMNL R G P P R V 3 1 0 1 0 2 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 15 0 1374.664 O96005 O96005 76 90 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 0.00037183 138.2 By MS/MS 1.5 0.5 1 1 2 392210 392210 0 5289 437 5465 12739;12740 10440 10440 1 113520 0 GPASTPTYSPAPTQPAPR AIDEADIPPPVAIGKGPASTPTYSPAPTQP STPTYSPAPTQPAPRIASAPEPRVTLEGPS K G P P R I 3 1 0 0 0 1 0 1 0 0 0 0 0 0 6 2 3 0 1 0 0 0 18 0 1794.8901 Q6P1N0 Q6P1N0 200 217 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.00029501 198.37 By MS/MS 3.5 0.5 1 1 2 689800 689800 0 5290 1701 5466 12741;12742 10441 10441 1 27491 0 GPATVDLELDALEGK RPETSVWPLRHFNGRGPATVDLELDALEGK GPATVDLELDALEGKELMQDGASLSDSTED R G P G K E 2 0 0 2 0 0 2 2 0 0 3 1 0 0 1 0 1 0 0 1 0 0 15 0 1526.7828 Q96DT7 Q96DT7 157 171 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 2 0.000485 176.32 By MS/MS 3.5 0.5 1 1 2 129080 129080 0 5291 2137 5467 12743;12744 10442;10443 10442 2 5532 0 GPCIIYNEDNGIIK AGKGKMRNRRRIQRRGPCIIYNEDNGIIKA RGPCIIYNEDNGIIKAFRNIPGITLLNVSK R G P I K A 0 0 2 1 1 0 1 2 0 4 0 1 0 0 1 0 0 0 1 0 0 0 14 0 1604.7868 P36578 P36578 206 219 RPL4 60S ribosomal protein L4 yes yes 2 3.515E-07 208.17 By MS/MS 6.5 0.5 1 1 2 6207800 6207800 0 5292 838 5468 12745;12746 10444;10445 10444 2 49350 0 GPCQESFYNLGR IVQGFSFLNRYLSLRGPCQESFYNLGRGLH SLRGPCQESFYNLGRGLHQLGLIHLAIHYY R G P G R G 0 1 1 0 1 1 1 2 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1426.6299 Q9Y5Q9 Q9Y5Q9 808 819 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 5.7509E-09 219.72 By MS/MS 4 0 1 1 1520000 1520000 0 5293 2920 5469 12747 10446 10446 1 143040 0 GPDALTLLEYTETR TVLEAGTQAPEGVARGPDALTLLEYTETRN RGPDALTLLEYTETRNQFLDELMELEIFLA R G P T R N 1 1 0 1 0 0 2 1 0 0 3 0 0 0 1 0 3 0 1 0 0 0 14 0 1577.7937 Q96JB5 Q96JB5 337 350 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 9.1411E-33 298.31 By MS/MS 5.5 0.5 1 1 2 2476300 2476300 0 5294 2177 5470 12748;12749 10447;10448 10447 2 23215 0 GPDELEGPDSK LRPQNSTTWRDGGGRGPDELEGPDSKLHHG GGGRGPDELEGPDSKLHHGHDPRGGLQPSG R G P S K L 0 0 0 2 0 0 2 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 0 1142.5091 P48634 P48634 214 224 PRRC2A Protein PRRC2A yes yes 2 0.00010068 151.83 By MS/MS 2 0 1 1 386220 386220 0 5295 938 5471 12750 10449 10449 1 130640 0 GPDETLR NFGIPCELRVTSAHKGPDETLRIKAEYEGD LRVTSAHKGPDETLRIKAEYEGDGIPTVFV K G P L R I 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 7 0 786.38718 P22234 P22234 305 311 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.01405 124.89 By MS/MS 7 0 1 1 1240400 1240400 0 5296 689 5472 12751 10450 10450 1 19472 0 GPDFTPAFADFGR PKLPMRTLDPRILPRGPDFTPAFADFGRQT PRGPDFTPAFADFGRQTPGGRGVPLLNVGS R G P G R Q 2 1 0 2 0 0 0 2 0 0 0 0 0 3 2 0 1 0 0 0 0 0 13 0 1396.6412 O43432 O43432 674 686 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00027412 155 By MS/MS 3 0.816 1 1 1 3 832600 832600 0 5297 210 5473 12752;12753;12754 10451 10451 1 211540 0 GPDGLTAFEATDNQAIK CVKLLLSKGADKTVKGPDGLTAFEATDNQA DGLTAFEATDNQAIKALLQ___________ K G P I K A 3 0 1 2 0 1 1 2 0 1 1 1 0 1 1 0 2 0 0 0 0 0 17 0 1746.8424 P58546 P58546 98 114 MTPN Myotrophin yes yes 2 2.3888E-33 341.72 By MS/MS 10 0 1 1 914100 914100 0 5298 1085 5474 12755 10452 10452 1 49267 0 GPDNSMGFGAER DDASAPRLMVLRQPRGPDNSMGFGAERKIR QPRGPDNSMGFGAERKIRQAGVID______ R G P E R K 1 1 1 1 0 0 1 3 0 0 0 0 1 1 1 1 0 0 0 0 0 0 12 0 1236.5193 O75534 O75534 778 789 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.00099342 124.67 By MS/MS 9.5 0.5 1 1 2 230230 230230 0 5299 333 5475 12756;12757 10453;10454 10454 139 2 8899.3 0 GPDWILGEIK LSRGDWYKTKEILLKGPDWILGEIKTSGLR EILLKGPDWILGEIKTSGLRGRGGAGFPTG K G P I K T 0 0 0 1 0 0 1 2 0 2 1 1 0 0 1 0 0 1 0 0 0 0 10 0 1126.6023 P49821 P49821 72 81 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.025393 84.213 By MS/MS 6 0 1 1 427170 427170 0 5300 966 5476 12758 10455 10455 1 2936.5 0 GPEEDHKA DKGMWKKLQEKFAPKGPEEDHKA_______ QEKFAPKGPEEDHKA_______________ K G P K A - 1 0 0 1 0 0 2 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 8 1 881.38791 Q9BRT2 Q9BRT2 119 126 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 0.0094662 135.84 By MS/MS 10 0 1 1 272120 272120 0 5301 2300 5477 12759 10456 10456 1 14666 0 GPESESEDHR QGLIRICSKPVVLPKGPESESEDHRASGEV VVLPKGPESESEDHRASGEVRTGKWKVPTY K G P H R A 0 1 0 1 0 0 3 1 1 0 0 0 0 0 1 2 0 0 0 0 0 0 10 0 1141.4636 P78527 P78527 500 509 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.4448E-05 156.35 By MS/MS 2 0 1 1 920270 920270 0 5302 1225 5478 12760 10457 10457 1 311270 0 GPESESEDHRASGEVR QGLIRICSKPVVLPKGPESESEDHRASGEV PESESEDHRASGEVRTGKWKVPTYKDYVDL K G P V R T 1 2 0 1 0 0 4 2 1 0 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1740.7663 P78527 P78527 500 515 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0091454 86.699 By MS/MS 2 0.816 1 1 1 3 1238900 1238900 0 5303 1225 5479 12761;12762;12763 10458;10459 10459 2 317950 0 GPFADENFK DFVNGDGTGVASIYRGPFADENFKLRHSAP VASIYRGPFADENFKLRHSAPGLLSMANSG R G P F K L 1 0 1 1 0 0 1 1 0 0 0 1 0 2 1 0 0 0 0 0 0 0 9 0 1023.4662 O43447 O43447 93 101 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.028713 85.161 By MS/MS 9.5 0.5 1 1 2 986780 986780 0 5304 211 5480 12764;12765 10460 10460 1 37388 0 GPFLVALGK GKRTPMCAHCNQVIRGPFLVALGKSWHPEE CNQVIRGPFLVALGKSWHPEEFNCAHCKNT R G P G K S 1 0 0 0 0 0 0 2 0 0 2 1 0 1 1 0 0 0 0 1 0 0 9 0 900.54329 Q96HC4 Q96HC4 429 437 PDLIM5 PDZ and LIM domain protein 5 yes yes 2 0.0025608 114.19 By MS/MS 5 0 1 1 1453000 1453000 0 5305 2164 5481 12766 10461 10461 1 14573 0 GPFTDVVTTNLK EQVLSLEPQHELKFRGPFTDVVTTNLKLGN KFRGPFTDVVTTNLKLGNPTDRNVCFKVKT R G P L K L 0 0 1 1 0 0 0 1 0 0 1 1 0 1 1 0 3 0 0 2 0 0 12 0 1290.682 Q9P0L0;O95292 O95292 20 31 VAPA;VAPB Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B/C no no 2 3.3686E-05 172.56 By MS/MS 7.5 0.5 1 1 2 2702100 2702100 0 5306 401;2665 5482 12767;12768 10462 10462 1 34522 0 GPGASGEQPEPGEAAAGGAAEEAR LPPPLPPPSPPGSGRGPGASGEQPEPGEAA EPGEAAAGGAAEEARRLEQRWGFGLEELYG R G P A R R 7 1 0 0 0 1 5 6 0 0 0 0 0 0 3 1 0 0 0 0 0 0 24 0 2164.9621 Q9H3P7 Q9H3P7 50 73 ACBD3 Golgi resident protein GCP60 yes yes 2;3 7.4307E-12 249.49 By MS/MS 5 0 2 2 2017600 2017600 0 5307 2440 5483 12769;12770 10463;10464;10465 10463 3 20235 0 GPGASVHDR SASATHGGGSPPGTRGPGASVHDRNANSYV SPPGTRGPGASVHDRNANSYVMVGTFNLPS R G P D R N 1 1 0 1 0 0 0 2 1 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 894.43078 P46379 P46379 119 127 BAG6 Large proline-rich protein BAG6 yes yes 2 0.0079434 104.06 By MS/MS 3 0 1 1 265190 265190 0 5308 911 5484 12771 10466 10466 1 4852.1 0 GPGGSSLLIEALSNSSHK KMEKSKDTYLLYEGRGPGGSSLLIEALSNS GSSLLIEALSNSSHKCQADIRHILNKNGGV R G P H K C 1 0 1 0 0 0 1 3 1 1 3 1 0 0 1 5 0 0 0 0 0 0 18 0 1752.9006 Q9BSH4 Q9BSH4 142 159 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 3 0.00013631 139 By MS/MS 8 0 1 1 2365400 2365400 0 5309 2306 5485 12772 10467 10467 1 29863 0 GPGLYYVDSEGNR MGLSMGTMICGWDKRGPGLYYVDSEGNRIS KRGPGLYYVDSEGNRISGATFSVGSGSVYA R G P N R I 0 1 1 1 0 0 1 3 0 0 1 0 0 0 1 1 0 0 2 1 0 0 13 0 1425.6525 P28074 P28074 167 179 PSMB5 Proteasome subunit beta type-5 yes yes 2 2.6308E-05 184.71 By MS/MS 9 0 1 1 4325300 4325300 0 5310 751 5486 12773 10468 10468 1 85123 0 GPILMELQTYR REATRFAAAYCRSGKGPILMELQTYRYHGH RSGKGPILMELQTYRYHGHSMSDPGVSYRT K G P Y R Y 0 1 0 0 0 1 1 1 0 1 2 0 1 0 1 0 1 0 1 0 0 0 11 0 1319.6908 P08559;P29803 P08559 278 288 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2 6.6519E-06 176.33 By MS/MS 7 0 1 1 317060 317060 0 5311 524 5487 12774 10469 10469 1 4977.2 0 GPILSFASTR LELNASDDRGIDIIRGPILSFASTRTIFKK IDIIRGPILSFASTRTIFKKGFKLVILDEA R G P T R T 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 2 1 0 0 0 0 0 10 0 1047.5713 P40937 P40937 103 112 RFC5 Replication factor C subunit 5 yes yes 2 0.0002553 143.37 By MS/MS 7 0 1 1 1356800 1356800 0 5312 863 5488 12775 10470 10470 1 21300 0 GPIQILNR RLKHMVDDKIHSRARGPIQILNRQPMEGRS KIHSRARGPIQILNRQPMEGRSRDGGLRFG R G P N R Q 0 1 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 8 0 909.5396 P30876 P30876 1065 1072 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.001484 148.21 By MS/MS 3 0 1 1 312280 312280 0 5313 781 5489 12776 10471 10471 1 5713.8 0 GPLMMYISK PDDEAAMGIKSCDPKGPLMMYISKMVPTSD KSCDPKGPLMMYISKMVPTSDKGRFYAFGR K G P S K M 0 0 0 0 0 0 0 1 0 1 1 1 2 0 1 1 0 0 1 0 0 0 9 0 1038.5242 P13639 P13639 392 400 EEF2 Elongation factor 2 yes yes 2 0.0085369 102.51 By MS/MS 4.33 0.471 2 1 3 1697100 1697100 0 5314 602 5490;5491 12777;12778;12779 10472;10473 10472 285 2 147150 0 GPLQSVQVFGR ______________________________ MPSKGPLQSVQVFGRKKTATAVAHCKRGNG K G P G R K 0 1 0 0 0 2 0 2 0 0 1 0 0 1 1 1 0 0 0 2 0 0 11 0 1186.6459 P62249 P62249 5 15 RPS16 40S ribosomal protein S16 yes yes 2 1.6257E-06 218.94 By MS/MS 9.75 0.433 1 3 4 31211000 31211000 0 5315 1145 5492 12780;12781;12782;12783 10474;10475;10476;10477;10478;10479 10476 6 1653600 0 GPLRKDPEPEDEVPDVK REECGPLPIVVASPRGPLRKDPEPEDEVPD LRKDPEPEDEVPDVKLDWEDVKTAQGMKRS R G P V K L 0 1 0 3 0 0 3 1 0 0 1 2 0 0 4 0 0 0 0 2 0 0 17 2 1918.9636 P82675 P82675 389 405 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 3 0.0056991 93.909 By MS/MS 7 0 1 1 882260 882260 0 5316 1233 5493 12784 10480;10481 10480 2 13850 0 GPLSGHK FVPAVEKGFLDACEKGPLSGHKLSGLRFVL GFLDACEKGPLSGHKLSGLRFVLQDGAHHM K G P H K L 0 0 0 0 0 0 0 2 1 0 1 1 0 0 1 1 0 0 0 0 0 0 7 0 694.37622 Q96RP9 Q96RP9 597 603 GFM1 Elongation factor G, mitochondrial yes yes 2 0.044027 94.163 By MS/MS 5 0 1 1 448030 448030 0 5317 2223 5494 12785 10482 10482 1 4493.5 0 GPLVNASLR KDTNVQVLMVLGAGRGPLVNASLRAAKQAD VLGAGRGPLVNASLRAAKQADRRIKLYAVE R G P L R A 1 1 1 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 925.53451 O14744 O14744 369 377 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.039585 80.455 By MS/MS 5.5 0.5 1 1 2 4476300 4476300 0 5318 137 5495 12786;12787 10483 10483 1 42422 0 GPNKHTLTQIK IEKCNNPRSVTLLIKGPNKHTLTQIKDAVR LLIKGPNKHTLTQIKDAVRDGLRAVKNAID K G P I K D 0 0 1 0 0 1 0 1 1 1 1 2 0 0 1 0 2 0 0 0 0 0 11 1 1235.6986 P40227 P40227 378 388 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 0.00072843 147.73 By MS/MS 7.25 1.56 1 2 2 1 1 1 8 42477000 42477000 0 5319 858 5496 12788;12789;12790;12791;12792;12793;12794;12795 10484;10485;10486;10487 10484 3 339960 0 GPNQPVESDESLGGLSAALR APSGASAQAAEQLQRGPNQPVESDESLGGL VESDESLGGLSAALRSWHLTPSCPLDPAPL R G P L R S 2 1 1 1 0 1 2 3 0 0 3 0 0 0 2 3 0 0 0 1 0 0 20 0 1995.9861 P51617 P51617 581 600 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 8.2615E-47 329.21 By MS/MS 5.5 0.5 1 1 2 2399000 2399000 0 5320 1001 5497 12796;12797 10488 10488 1 22363 0 GPPASSPAPAPK QSQTQPVSLANTQPRGPPASSPAPAPKFSP QPRGPPASSPAPAPKFSPVTPKFTPVASKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 Q15942 Q15942 254 265 ZYX Zyxin yes yes 2 0.00024723 147.4 By MS/MS 5 0 1 1 1342100 1342100 0 5321 1541 5498 12798 10489 10489 1 13460 0 GPPIEDAIASSDVLETASK VSSEENGHSFHTPQKGPPIEDAIASSDVLE EDAIASSDVLETASKSANPPHTIQASEEQS K G P S K S 3 0 0 2 0 0 2 1 0 2 1 1 0 0 2 3 1 0 0 1 0 0 19 0 1898.9473 Q9Y450 Q9Y450 196 214 HBS1L HBS1-like protein yes yes 2 6.9194E-13 247.73 By MS/MS 3 2 1 1 2 558240 558240 0 5322 2887 5499 12799;12800 10490;10491;10492 10492 3 24619 0 GPPPPPGDENR TPTVLPMGAPVPRPRGPPPPPGDENREMDD PRPRGPPPPPGDENREMDDPSVGPKIPQAL R G P N R E 0 1 1 1 0 0 1 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 11 0 1131.5309 Q13435 Q13435 248 258 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.02356 83.783 By MS/MS 3 0 1 1 569920 569920 0 5323 1384 5500 12801 10493 10493 1 10428 0 GPPRGGPGGELPR TPSFANLGRTTLSTRGPPRGGPGGELPRGP TRGPPRGGPGGELPRGPAGLGPRRSQQGPR R G P P R G 0 2 0 0 0 0 1 5 0 0 1 0 0 0 4 0 0 0 0 0 0 0 13 1 1245.6578 Q04637 Q04637 682 694 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.049384 85.973 By MS/MS 2 0 1 1 0 0 0 5324 1291 5501 12802 10494 10494 1 0 0 GPQVQQPPPSNR EMLGLSKVPLTQATRGPQVQQPPPSNRFLQ ATRGPQVQQPPPSNRFLQPVQKIDMNLTDL R G P N R F 0 1 1 0 0 3 0 1 0 0 0 0 0 0 4 1 0 0 0 1 0 0 12 0 1303.6633 Q15436 Q15436 217 228 SEC23A Protein transport protein Sec23A yes yes 2 7.4318E-05 159.83 By MS/MS 5 0 1 1 437250 437250 0 5325 1513 5502 12803 10495 10495 1 4385.4 0 GPSAFIPVEEVLR PGEEQRESRARRGPRGPSAFIPVEEVLREG PRGPSAFIPVEEVLREGAESLEQHLGLEAL R G P L R E 1 1 0 0 0 0 2 1 0 1 1 0 0 1 2 1 0 0 0 2 0 0 13 0 1412.7664 P58004 P58004 43 55 SESN2 Sestrin-2 yes yes 2 0.004 129.82 By MS/MS 6.5 0.5 1 1 2 2172400 2172400 0 5326 1083 5503 12804;12805 10496 10496 1 15450 0 GPSGCVESLEVTCR LRHTGYVIELQHVVKGPSGCVESLEVTCRR KGPSGCVESLEVTCRRADAGEKPKAFIHWV K G P C R R 0 1 0 0 2 0 2 2 0 0 1 0 0 0 1 2 1 0 0 2 0 0 14 0 1549.6865 P47897 P47897 653 666 QARS Glutamine--tRNA ligase yes yes 2 4.2035E-05 190.26 By MS/MS 4.5 0.5 1 1 2 3277700 3277700 0 5327 928 5504 12806;12807 10497 10497 1 253810 0 GPSGLLVYQGK QYLESMQIGDTIEFRGPSGLLVYQGKGKFA IEFRGPSGLLVYQGKGKFAIRPDKKSNPII R G P G K G 0 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1117.6132 P00387 P00387 144 154 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 2 1.4717E-05 168.8 By MS/MS 8 0 1 1 3709100 3709100 0 5328 443 5505 12808 10498 10498 1 46827 0 GPSSVEDIK QESFKKQEKTPKTPKGPSSVEDIKAKMQAS TPKTPKGPSSVEDIKAKMQASIEKGGSLPK K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.00083989 136.27 By MS/MS 8.67 1.25 1 1 1 3 2228100 2228100 0 5329 503 5506 12809;12810;12811 10499;10500;10501 10501 3 45360 0 GPSSVEDIKAK QESFKKQEKTPKTPKGPSSVEDIKAKMQAS KTPKGPSSVEDIKAKMQASIEKGGSLPKVE K G P A K M 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 11 1 1129.5979 P06748 P06748 240 250 NPM1 Nucleophosmin yes yes 3 0.0029467 104.82 By MS/MS 7 0 1 1 1625200 1625200 0 5330 503 5507 12812 10502 10502 1 25513 0 GPSTENQEAKR VSWLTLSGPEQSSVRGPSTENQEAKRVALE SSVRGPSTENQEAKRVALECIKQCDPEKMI R G P K R V 1 1 1 0 0 1 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 11 1 1215.5844 Q92538 Q92538 1095 1105 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00027609 157.75 By MS/MS 2 0 1 1 0 0 0 5331 2050 5508 12813 10503 10503 1 0 0 GPSVFPLAPSSK WGQGTLVTVSSASTKGPSVFPLAPSSKSTS STKGPSVFPLAPSSKSTSGGTAALGCLVKD K G P S K S 1 0 0 0 0 0 0 1 0 0 1 1 0 1 3 3 0 0 0 1 0 0 12 0 1185.6394 P0DOX5;P01857 P0DOX5 124 135 IGHG1 Ig gamma-1 chain C region yes no 2 0.019586 98.04 By MS/MS 4 3.54 1 1 1 1 4 365600 0 365600 5332 453 5509 12814;12815;12816;12817 10504;10505;10506;10507 10507 4 0 303120 GPVEGYEENEEFLR FLEAADNLRLIQVPKGPVEGYEENEEFLRT KGPVEGYEENEEFLRTMHHLLLEVEVIEGT K G P L R T 0 1 1 0 0 0 5 2 0 0 1 0 0 1 1 0 0 0 1 1 0 0 14 0 1666.7475 Q9UI30 Q9UI30 69 82 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 2.4561E-24 326.85 By MS/MS 10 0 1 1 1165200 1165200 0 5333 2737 5510 12818 10508 10508 1 62800 0 GPVGLEGLLTTK LGAEVGISTSRIHARGPVGLEGLLTTKWLL HARGPVGLEGLLTTKWLLRGKDHVVSDFSE R G P T K W 0 0 0 0 0 0 1 3 0 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1183.6812 P54886 P54886 750 761 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 7.2076E-05 160.53 By MS/MS By MS/MS 5 2.34 1 1 1 1 3 1 1 1 1 10 1 35551000 35480000 71077 5334 1048 5511 12819;12820;12821;12822;12823;12824;12825;12826;12827;12828;12829 10509;10510;10511;10512;10513;10514;10515;10516;10517;10518;10519;10520 10519 11 558920 59690 GPVREGDVLTLLESER EFMDDTSRSIIRNVKGPVREGDVLTLLESE PVREGDVLTLLESEREARRLR_________ K G P E R E 0 2 0 1 0 0 3 2 0 0 3 0 0 0 1 1 1 0 0 2 0 0 16 1 1768.9319 P62857 P62857 48 63 RPS28 40S ribosomal protein S28 yes yes 2;3 2.3296E-10 259.27 By MS/MS 10 0 2 2 1305700 1305700 0 5335 1178 5512 12830;12831 10521;10522 10522 2 70371 0 GPVYIGELPQDFLR ______________________________ RGPVYIGELPQDFLRITPTQQQRQVQLDAQ R G P L R I 0 1 0 1 0 1 1 2 0 1 2 0 0 1 2 0 0 0 1 1 0 0 14 0 1602.8406 Q9H0E2 Q9H0E2 10 23 TOLLIP Toll-interacting protein yes yes 2 0.00088044 142.08 By MS/MS 8 0 1 1 81948 81948 0 5336 2408 5513 12832 10523 10523 1 1034.6 0 GPYESGSGHSSGLGHQESR SYGPHGYGSGRSSSRGPYESGSGHSSGLGH SGSGHSSGLGHQESRSGQSSGYGQHGSSSG R G P S R S 0 1 0 0 0 1 2 5 2 0 1 0 0 0 1 5 0 0 1 0 0 0 19 0 1927.8409 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 572 590 HRNR Hornerin yes no 3 0.00012345 128.45 By MS/MS By MS/MS 5.88 3.02 1 1 1 1 1 2 1 2 6 4012500 1214300 2798200 + 5337 73 5514 12833;12834;12835;12836;12837;12838;12839;12840 10524;10525;10526;10527;10528;10529;10530;10531 10530 8 90288 652270 GPYESGSGHSSGLGHR SYGPYRSGSGWSSSRGPYESGSGHSSGLGH PYESGSGHSSGLGHRESRSGQSSGYGQHGS R G P H R E 0 1 0 0 0 0 1 5 2 0 1 0 0 0 1 4 0 0 1 0 0 0 16 0 1583.7077 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1038 1053 HRNR Hornerin yes no 2;3;4 1.5967E-10 190.66 By MS/MS By MS/MS 4.56 2.82 3 5 2 5 2 2 1 1 2 2 13 12 55499000 23916000 31583000 + 5338 73 5515 12841;12842;12843;12844;12845;12846;12847;12848;12849;12850;12851;12852;12853;12854;12855;12856;12857;12858;12859;12860;12861;12862;12863;12864;12865 10532;10533;10534;10535;10536;10537;10538;10539;10540;10541;10542 10537 11 1707000 8665400 GQAFVIFK GHVVDIVALKTMKMRGQAFVIFKELGSSTN LKTMKMRGQAFVIFKELGSSTNALRQLQGF R G Q F K E 1 0 0 0 0 1 0 1 0 1 0 1 0 2 0 0 0 0 0 1 0 0 8 0 908.51199 P08579 P08579 50 57 SNRPB2 U2 small nuclear ribonucleoprotein B no no 2 0.05045 82.305 By MS/MS 8 0 1 1 395570 395570 0 5339 526 5516 12866 10543 10543 1 4994 0 GQAGALERPVLIHR QLDFQLPLRFDLQYKGQAGALERPVLIHRA KGQAGALERPVLIHRAVLGSVERLLGVLAE K G Q H R A 2 2 0 0 0 1 1 2 1 1 2 0 0 0 1 0 0 0 0 1 0 0 14 1 1515.8634 Q9BW92 Q9BW92 573 586 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 3 0.0002581 136.27 By MS/MS 5 0 1 1 7335400 7335400 0 5340 2346 5517 12867 10544 10544 1 73570 0 GQAGFFSTPGGASR GEEGVGGAGGRDHLRGQAGFFSTPGGASRD RGQAGFFSTPGGASRDGSGPGEEGKQRTLT R G Q S R D 2 1 0 0 0 1 0 4 0 0 0 0 0 2 1 2 1 0 0 0 0 0 14 0 1338.6317 Q8IYI6 Q8IYI6 135 148 EXOC8 Exocyst complex component 8 yes yes 2 7.1608E-05 213.63 By MS/MS 5 0 1 1 2966100 2966100 0 5341 1887 5518 12868 10545 10545 1 29749 0 GQDIEYIEIR EINKIIRDLWRSTYRGQDIEYIEIRSDADE RSTYRGQDIEYIEIRSDADENVSASDKRRN R G Q I R S 0 1 0 1 0 1 2 1 0 3 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1234.6194 Q92878 Q92878 1157 1166 RAD50 DNA repair protein RAD50 yes yes 2 0.0005373 140.78 By MS/MS 3 0 1 1 726070 726070 0 5342 2074 5519 12869 10546 10546 1 13285 0 GQDIFIIQTIPR ETNGETRVEIKESVRGQDIFIIQTIPRDVN SVRGQDIFIIQTIPRDVNTAVMELLIMAYA R G Q P R D 0 1 0 1 0 2 0 1 0 4 0 0 0 1 1 0 1 0 0 0 0 0 12 0 1399.7823 Q14558 Q14558 57 68 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 2 0.00071681 130.44 By MS/MS 7 0 1 1 175150 175150 0 5343 1443 5520 12870 10547 10547 1 2749.6 0 GQENQLVALIPYSDQR SVTCPTCQGTGRIPRGQENQLVALIPYSDQ QENQLVALIPYSDQRLRPRRTKLYVMASVF R G Q Q R L 1 1 1 1 0 3 1 1 0 1 2 0 0 0 1 1 0 0 1 1 0 0 16 0 1829.9272 Q9NUM4 Q9NUM4 73 88 TMEM106B Transmembrane protein 106B yes yes 2 0.001074 118.24 By MS/MS 7 0 1 1 251720 251720 0 5344 2583 5521 12871 10548 10548 1 3951.6 0 GQEVETSVTYYR SGSMATAEASGSDGKGQEVETSVTYYRLEE DGKGQEVETSVTYYRLEEVAKRNSLKELWL K G Q Y R L 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 1 2 0 2 2 0 0 12 0 1430.6678 O43169 O43169 17 28 CYB5B Cytochrome b5 type B yes yes 2 1.5056E-08 209.8 By MS/MS 9 0 1 1 629960 629960 0 5345 193 5522 12872 10549 10549 1 12398 0 GQFIEELITK REYVTDLLQGNEGKKGQFIEELITKWQKND NEGKKGQFIEELITKWQKNDQELISDPLQQ K G Q T K W 0 0 0 0 0 1 2 1 0 2 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1176.639 Q15650 Q15650 61 70 TRIP4 Activating signal cointegrator 1 yes yes 2 0.0014511 114.89 By MS/MS 5 0 1 1 338170 338170 0 5346 1523 5523 12873 10550 10550 1 3391.6 0 GQFSTDELVAEVEK DCSEDVIKNLILVVRGQFSTDELVAEVEKR RGQFSTDELVAEVEKRNRLKLLLPWLEARI R G Q E K R 1 0 0 1 0 1 3 1 0 0 1 1 0 1 0 1 1 0 0 2 0 0 14 0 1550.7464 Q00610;P53675 Q00610 838 851 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.00034232 166.45 By MS/MS 2.5 1.12 1 1 1 1 4 824490 824490 0 5347 1262 5524 12874;12875;12876;12877 10551;10552;10553 10553 2 114720 0 GQGATAAQQGGYEIPAR FPNEEEEDPSNGLSRGQGATAAQQGGYEIP GATAAQQGGYEIPARLRTLHNLVIQYAAQG R G Q A R L 4 1 0 0 0 3 1 4 0 1 0 0 0 0 1 0 1 0 1 0 0 0 17 0 1673.8121 Q9NSK0 Q9NSK0 194 210 KLC4 Kinesin light chain 4 yes yes 2 5.1414E-05 195.87 By MS/MS 5 0 1 1 529740 529740 0 5348 2572 5525 12878 10554 10554 1 5313 0 GQGGAGAGDDEEED GGGRPGRVKRKNAKKGQGGAGAGDDEEED_ KGQGGAGAGDDEEED_______________ K G Q E D - 2 0 0 3 0 1 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 1305.4593 P46781 P46781 181 194 RPS9 40S ribosomal protein S9 yes yes 2 6.3173E-33 303.71 By MS/MS 9 0 1 1 1202100 1202100 0 5349 918 5526 12879 10555 10555 1 23658 0 GQGPGEVDPK QRKKRREKKAAELAKGQGPGEVDPKVAL__ AELAKGQGPGEVDPKVAL____________ K G Q P K V 0 0 0 1 0 1 1 3 0 0 0 1 0 0 2 0 0 0 0 1 0 0 10 0 982.47197 P17568 P17568 125 134 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 2 0.009544 95.358 By MS/MS 9 0 1 1 1651200 1651200 0 5350 643 5527 12880 10556 10556 1 32495 0 GQGSVSASVTEGQQNEQ ESVDGQWVCISDVNKGQGSVSASVTEGQQN GSVSASVTEGQQNEQ_______________ K G Q E Q - 1 0 1 0 0 4 2 3 0 0 0 0 0 0 0 3 1 0 0 2 0 0 17 0 1704.7551 P55735 P55735 306 322 SEC13 Protein SEC13 homolog yes yes 2 1.3906E-105 423.77 By MS/MS 7.5 0.5 1 1 2 1373300 1373300 0 5351 1060 5528 12881;12882 10557 10557 1 20984 0 GQGTEFNLTFR QWPYGDICSISPVGKGQGTEFNLTFRKGSG PVGKGQGTEFNLTFRKGSGKKSETLKFSTE K G Q F R K 0 1 1 0 0 1 1 2 0 0 1 0 0 2 0 0 2 0 0 0 0 0 11 0 1268.6149 O75165 O75165 63 73 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.3881E-05 169.58 By MS/MS 2 0 1 1 240260 240260 0 5352 302 5529 12883 10558 10558 1 81266 0 GQHSSGSGQSPGHGQR SYGQHESASRHSSGRGQHSSGSGQSPGHGQ QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT R G Q Q R G 0 1 0 0 0 3 0 5 2 0 0 0 0 0 1 4 0 0 0 0 0 0 16 0 1562.6934 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 414 429 HRNR Hornerin yes no 2;3 2.6847E-11 231.07 By MS/MS By MS/MS 5.1 3.01 3 2 2 3 3 2 1 2 3 12 9 2195200 973740 1221400 + 5353 73 5530 12884;12885;12886;12887;12888;12889;12890;12891;12892;12893;12894;12895;12896;12897;12898;12899;12900;12901;12902;12903;12904 10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572 10562 14 54667 462760 GQILMPNIGYGSNK RKPRGIDNRVRRRFKGQILMPNIGYGSNKK KGQILMPNIGYGSNKKTKHMLPSGFRKFLV K G Q N K K 0 0 2 0 0 1 0 3 0 2 1 1 1 0 1 1 0 0 1 0 0 0 14 0 1490.7551 P62910 P62910 51 64 RPL32 60S ribosomal protein L32 yes yes 2 0.026904 80.245 By MS/MS 9 0 1 1 217590 217590 0 5354 1185 5531 12905 10573 10573 1 4282.2 0 GQKCEFQDAYVLLSEK FDRGYISPYFINTSKGQKCEFQDAYVLLSE QKCEFQDAYVLLSEKKISSIQSIVPALEIA K G Q E K K 1 0 0 1 1 2 2 1 0 0 2 2 0 1 0 1 0 0 1 1 0 0 16 1 1913.9193 P10809 P10809 234 249 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.0029181 204.17 By MS/MS 6.33 0.471 2 1 3 16167000 16167000 0 5355 569 5532 12906;12907;12908 10574;10575 10575 2 112660 0 GQKCEFQDAYVLLSEKK FDRGYISPYFINTSKGQKCEFQDAYVLLSE KCEFQDAYVLLSEKKISSIQSIVPALEIAN K G Q K K I 1 0 0 1 1 2 2 1 0 0 2 3 0 1 0 1 0 0 1 1 0 0 17 2 2042.0143 P10809 P10809 234 250 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3;4 0.00041028 163.56 By MS/MS 6 0 2 2 30848000 30848000 0 5356 569 5533 12909;12910 10576;10577 10576 2 212050 0 GQLENAEQLFK ITYTYDLMANLAFIRGQLENAEQLFKATMS AFIRGQLENAEQLFKATMSYLLGGGMKQED R G Q F K A 1 0 1 0 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 11 0 1275.6459 Q6DKK2 Q6DKK2 150 160 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 0.0019316 115 By MS/MS 7.5 0.5 1 1 2 1467600 1467600 0 5357 1676 5534 12911;12912 10578;10579 10579 2 20429 0 GQLPDYTSPVVLPYSR IWDYLKLVRIYTKPKGQLPDYTSPVVLPYS QLPDYTSPVVLPYSRTTVEDFCMKIHKNLI K G Q S R T 0 1 0 1 0 1 0 1 0 0 2 0 0 0 3 2 1 0 2 2 0 0 16 0 1790.9203 Q9Y295 Q9Y295 300 315 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 0.0003825 143.58 By MS/MS 7 0 1 1 867230 867230 0 5358 2822 5535 12913 10580 10580 1 13614 0 GQPAIIDGELYNEVK MVVDIQRRHLRVGLKGQPAIIDGELYNEVK GQPAIIDGELYNEVKVEESSWLIEDGKVVT K G Q V K V 1 0 1 1 0 1 2 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 15 0 1644.8359 Q9Y266 Q9Y266 213 227 NUDC Nuclear migration protein nudC yes yes 2 0.00052885 169.58 By MS/MS 7 0 1 1 907600 907600 0 5359 2816 5536 12914 10581 10581 1 14248 0 GQPATHGQTK IGKGFQGVMKRWGFKGQPATHGQTKTHRRP RWGFKGQPATHGQTKTHRRPGAVATGDIGR K G Q T K T 1 0 0 0 0 2 0 2 1 0 0 1 0 0 1 0 2 0 0 0 0 0 10 0 1023.5098 P09001 P09001 226 235 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.045764 74.376 By MS/MS 8 0 1 1 31354 31354 0 5360 531 5537 12915 10582 10582 1 395.84 0 GQPDVVVKEDEEYK GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR KGQPDVVVKEDEEYKRVDFSKVPKLKTVFQ K G Q Y K R 0 0 0 2 0 1 3 1 0 0 0 2 0 0 1 0 0 0 1 3 0 0 14 1 1633.7835 P24752 P24752 244 257 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0020177 125.03 By MS/MS 7 0 1 1 1164200 1164200 0 5361 716 5538 12916 10583 10583 1 18276 0 GQPDVVVKEDEEYKR GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR GQPDVVVKEDEEYKRVDFSKVPKLKTVFQK K G Q K R V 0 1 0 2 0 1 3 1 0 0 0 2 0 0 1 0 0 0 1 3 0 0 15 2 1789.8846 P24752 P24752 244 258 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 4 0.040629 45.992 By MS/MS 7 0 1 1 1236300 1236300 0 5362 716 5539 12917 10584 10584 1 19407 0 GQQELLYVVPFVAK TDLDVKSLLLEAYVKGQQELLYVVPFVAKV KGQQELLYVVPFVAKVLESSIRSVVFRPPN K G Q A K V 1 0 0 0 0 2 1 1 0 0 2 1 0 1 1 0 0 0 1 3 0 0 14 0 1589.8817 A5YKK6 A5YKK6 1228 1241 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 7.0449E-05 181.31 By MS/MS 2 0 1 1 148790 148790 0 5363 19 5540 12918 10585 10585 1 50326 0 GQQQVFK LKTILKDATLTALDRGQQQVFKGLNDKVKK ATLTALDRGQQQVFKGLNDKVKKKALTSFE R G Q F K G 0 0 0 0 0 3 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 833.43955 P40939 P40939 400 406 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.029272 105.27 By MS/MS By matching 5 0 2 1 1 5451600 5408700 42926 5364 865 5541 12919;12920 10586 10586 1 54247 36048 GQRPETLHER STFLFEDFSKASGFKGQRPETLHERLTLVS ASGFKGQRPETLHERLTLVSVYAPYLLIPF K G Q E R L 0 2 0 0 0 1 2 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 10 1 1221.6214 Q5BJF2 Q5BJF2 131 140 TMEM97 Transmembrane protein 97 yes yes 3 0.0021226 126.71 By MS/MS 9.5 0.5 1 1 2 2464300 2464300 0 5365 1598 5542 12921;12922 10587;10588 10588 2 56392 0 GQSEDPGSLLSLFR FPDIPGAVSANMTVKGQSEDPGSLLSLFRR KGQSEDPGSLLSLFRRLSDQRSKERSLLHG K G Q F R R 0 1 0 1 0 1 1 2 0 0 3 0 0 1 1 3 0 0 0 0 0 0 14 0 1504.7522 P08195 P08195 511 524 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 2.79E-07 225.55 By MS/MS 5 0.816 1 1 1 3 3748500 3748500 0 5366 519 5543 12923;12924;12925 10589;10590;10591;10592;10593;10594 10593 6 113230 0 GQSEEIQK RQINWTVLYRRKHKKGQSEEIQKKRTRRAV YRRKHKKGQSEEIQKKRTRRAVKFQRAITG K G Q Q K K 0 0 0 0 0 2 2 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 8 0 917.44543 P83731 P83731 62 69 RPL24 60S ribosomal protein L24 yes yes 2 0.028396 90.709 By MS/MS 9 0 1 1 3418500 3418500 0 5367 1241 5544 12926 10595 10595 1 67277 0 GQTGGDVNVEMDAAPGVDLSR AYLRKNHEEEMLALRGQTGGDVNVEMDAAP VNVEMDAAPGVDLSRILNEMRDQYEQMAEK R G Q S R I 2 1 1 3 0 1 1 4 0 0 1 0 1 0 1 1 1 0 0 3 0 0 21 0 2086.9589 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 264 284 KRT16 Keratin, type I cytoskeletal 16 yes no 2 9.9493E-60 347.06 By MS/MS By MS/MS 2.6 1.02 1 1 2 1 2 3 2875600 2096300 779340 + 5368 47 5545 12927;12928;12929;12930;12931 10596;10597;10598 10598 30 3 184840 456080 GQTHTLEDFQR CAGIAVASKTYNLKKGQTHTLEDFQRVLDV NLKKGQTHTLEDFQRVLDVNLMGTFNVIRL K G Q Q R V 0 1 0 1 0 2 1 1 1 0 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1330.6266 Q99714 Q99714 106 116 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2;3 1.5516E-06 183.85 By MS/MS 8 0 2 2 905820 905820 0 5369 2261 5546 12932;12933 10599;10600 10599 2 11436 0 GQTLTLTQQQR AYEQVIKYCTTYQSKGQTLTLTQQQRDVYQ YQSKGQTLTLTQQQRDVYQQEKARMGSAGL K G Q Q R D 0 1 0 0 0 4 0 1 0 0 2 0 0 0 0 0 3 0 0 0 0 0 11 0 1272.6786 P98194 P98194 497 507 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 2 0.00015231 147.3 By MS/MS 1.5 0.5 1 1 2 209450 209450 0 5370 1254 5547 12934;12935 10601;10602 10601 2 64448 0 GQVEYLLK EEYVVEKVLDRRVVKGQVEYLLKWKGFSEE LDRRVVKGQVEYLLKWKGFSEEHNTWEPEK K G Q L K W 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 8 0 948.52803 P45973 P45973 33 40 CBX5 Chromobox protein homolog 5 yes yes 2 0.017971 100.02 By MS/MS 9 0 1 1 516150 516150 0 5371 905 5548 12936 10603 10603 1 10158 0 GQVGGDVNVEMDAAPGVDLSR AYLKKNHEEEMNALRGQVGGDVNVEMDAAP VNVEMDAAPGVDLSRILNEMRDQYEKMAEK R G Q S R I 2 1 1 3 0 1 1 4 0 0 1 0 1 0 1 1 0 0 0 4 0 0 21 0 2084.9797 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 262 282 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 1.5134E-35 297.73 By MS/MS By MS/MS 2.75 1.2 2 1 2 3 3 5 24406000 21705000 2700700 + 5372 39 5549 12937;12938;12939;12940;12941;12942;12943;12944 10604;10605;10606;10607;10608;10609 10608 17 6 2098500 1161900 GQVGGTFAR DVLGCVCVNPGRLTKGQVGGTFARLYLRRP PGRLTKGQVGGTFARLYLRRPAADGAERQS K G Q A R L 1 1 0 0 0 1 0 3 0 0 0 0 0 1 0 0 1 0 0 1 0 0 9 0 891.45626 Q14181 Q14181 565 573 POLA2 DNA polymerase alpha subunit B yes yes 2 0.039585 80.455 By MS/MS 5 0 1 1 616860 616860 0 5373 1428 5550 12945 10610 10610 1 6186.8 0 GQVKEEGINKSEK APRGKSGAALSKKSKGQVKEEGINKSEKRM SKGQVKEEGINKSEKRMKLTLKGGAAVDPD K G Q E K R 0 0 1 0 0 1 3 2 0 1 0 3 0 0 0 1 0 0 0 1 0 0 13 2 1444.7522 P09874 P09874 509 521 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.022103 81.565 By MS/MS 4 0.816 1 1 1 3 1481500 1481500 0 5374 543 5551 12946;12947;12948 10611 10611 1 110390 0 GQVKNEALR KKDDETVDSLGPLEKGQVKNEALRELRVEL LGPLEKGQVKNEALRELRVELSKKHQAREL K G Q L R E 1 1 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1013.5618 Q9UJX2 Q9UJX2 144 152 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.012859 113.66 By MS/MS 6 0 1 1 1270800 1270800 0 5375 2751 5552 12949 10612 10612 1 8736 0 GQYNTYPIK QGFRVDLPIKSARYRGQYNTYPIKLFYTSN KSARYRGQYNTYPIKLFYTSNIPIILQSAL R G Q I K L 0 0 1 0 0 1 0 1 0 1 0 1 0 0 1 0 1 0 2 0 0 0 9 0 1082.5397 P61619 P61619 274 282 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.0015503 127.02 By MS/MS 1.5 0.5 1 1 2 646070 646070 0 5376 1127 5553 12950;12951 10613;10614 10614 2 185360 0 GRDLGAYLR FLKLCEEWPVDETKRGRDLGAYLRQRVAQA VDETKRGRDLGAYLRQRVAQAFREGENTQV R G R L R Q 1 2 0 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 9 1 1019.5512 Q9BRT2 Q9BRT2 24 32 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 0.050619 100.02 By MS/MS 10 0 1 1 365410 365410 0 5377 2300 5554 12952 10615 10615 1 19694 0 GRDVIAQSQSGTGK KPSAIQQRAIKQIIKGRDVIAQSQSGTGKT KGRDVIAQSQSGTGKTATFSISVLQCLDIQ K G R G K T 1 1 0 1 0 2 0 3 0 1 0 1 0 0 0 2 1 0 0 1 0 0 14 1 1402.7165 P38919 P38919 75 88 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 2 0.00019197 151.3 By MS/MS 6 0 1 1 1362800 1362800 0 5378 851 5555 12953 10616 10616 0 9368.2 0 GREFGVTTGR PTEQDNEIGELLQTRGREFGVTTGRKRRCG LLQTRGREFGVTTGRKRRCGWLDLVLLKYA R G R G R K 0 2 0 0 0 0 1 3 0 0 0 0 0 1 0 0 2 0 0 1 0 0 10 1 1078.552 P30520 P30520 325 334 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.032443 102.06 By MS/MS 6.5 0.5 1 1 2 1387200 1387200 0 5379 774 5556 12954;12955 10617 10617 1 19135 0 GREPEARPK DFQGITPGAQGPSSRGREPEARPKRELRER QGPSSRGREPEARPKRELREREGPSLGPPP R G R P K R 1 2 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 9 2 1038.557 O75150 O75150 603 611 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 3 0.038385 76.282 By MS/MS 3 0 1 1 93779 93779 0 5380 297 5557 12956 10618 10618 1 1715.9 0 GRGDASGLKR AIYLWSRQQRRREARGRGDASGLKRNSERK RREARGRGDASGLKRNSERKTPEGRASPAP R G R K R N 1 2 0 1 0 0 0 3 0 0 1 1 0 0 0 1 0 0 0 0 0 0 10 2 1015.5523 O94826 O94826 70 79 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.0051488 99.752 By MS/MS 5 0 1 1 1386100 1386100 0 5381 369 5558 12957 10619 10619 1 13902 0 GRGGGGGGFR ______________________________ SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR R G R F R G 0 2 0 0 0 0 0 7 0 0 0 0 0 1 0 0 0 0 0 0 0 0 10 1 876.43145 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 11 20 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.034021 117.4 By MS/MS 3 0 1 1 7025500 0 7025500 + 5382 55 5559 12958 10620 10620 1 0 894240 GRGHVQPIR ______________________________ NGRAKKGRGHVQPIRCTNCARCVPKDKAIK K G R I R C 0 2 0 0 0 1 0 2 1 1 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1018.5784 P62854;Q5JNZ5 P62854 14 22 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2;3 0.030139 73.616 By MS/MS 9.67 0.471 1 2 3 1638900 1638900 0 5383 1177 5560 12959;12960;12961 10621;10622 10622 2 81914 0 GRHVVCAAETGSGK QPTTVQSSTIPSLLRGRHVVCAAETGSGKT RGRHVVCAAETGSGKTLSYLLPLLQRLLGQ R G R G K T 2 1 0 0 1 0 1 3 1 0 0 1 0 0 0 1 1 0 0 2 0 0 14 1 1427.6939 Q9NUL7 Q9NUL7 165 178 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.002169 144.28 By MS/MS 6 0 1 1 258130 258130 0 5384 2582 5561 12962 10623 10623 1 1774.5 0 GRLDYLSSLK QAFQGHGAGNLAGLKGRLDYLSSLKVKGLV LAGLKGRLDYLSSLKVKGLVLGPIHKNQKD K G R L K V 0 1 0 1 0 0 0 1 0 0 3 1 0 0 0 2 0 0 1 0 0 0 10 1 1150.6346 P08195 P08195 246 255 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.037028 99.973 By MS/MS 5 0 1 1 2540800 2540800 0 5385 519 5562 12963 10624 10624 1 25483 0 GRLKEELEEAR KKQKEMDEAATAEERGRLKEELEEARDIAR AEERGRLKEELEEARDIARRRSLGNIKFIG R G R A R D 1 2 0 0 0 0 4 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 2 1328.7048 Q04637 Q04637 878 888 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.04536 69.261 By MS/MS 2 0 1 1 573380 573380 0 5386 1291 5563 12964 10625 10625 0 193940 0 GRPAVCQPQGR NYVPCPAPQPVQMYRGRPAVCQPQGRFSTQ QMYRGRPAVCQPQGRFSTQCQYQGSYSSCG R G R G R F 1 2 0 0 1 2 0 2 0 0 0 0 0 0 2 0 0 0 0 1 0 0 11 1 1224.6146 Q5T749 Q5T749 167 177 KPRP Keratinocyte proline-rich protein yes yes 2;3 0.012925 133.58 By MS/MS By MS/MS 4.26 2.42 3 2 3 3 2 3 1 1 1 6 13 3647200 1313700 2333500 5387 1636 5564 12965;12966;12967;12968;12969;12970;12971;12972;12973;12974;12975;12976;12977;12978;12979;12980;12981;12982;12983 10626;10627;10628;10629;10630;10631;10632;10633;10634;10635;10636 10628 11 67542 2508600 GRPLAEESEQER LYNGLHRPLLGRLSRGRPLAEESEQERLLG LSRGRPLAEESEQERLLGGTRTPINDAS__ R G R E R L 1 2 0 0 0 1 4 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1399.6692 Q8N357 Q8N357 347 358 SLC35F6 Solute carrier family 35 member F6 yes yes 2;3 0.00013085 200.93 By MS/MS 2 0.816 2 2 2 6 1558900 1558900 0 5388 1910 5565 12984;12985;12986;12987;12988;12989 10637;10638;10639;10640 10639 4 395050 0 GRSDYDGIGSR FSDRGSGSRGRFDDRGRSDYDGIGSRGDRS FDDRGRSDYDGIGSRGDRSGFGKFERGGNS R G R S R G 0 2 0 2 0 0 0 3 0 1 0 0 0 0 0 2 0 0 1 0 0 0 11 1 1181.5425 O00571 O00571 100 110 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.0080295 112.83 By MS/MS 5 0 2 2 2448000 2448000 0 5389 116 5566 12990;12991 10641;10642 10642 2 24552 0 GRTVGVSK GLRVRGQHTKTTGRRGRTVGVSKKK_____ TKTTGRRGRTVGVSKKK_____________ R G R S K K 0 1 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 2 0 0 8 1 802.4661 P62269 P62269 143 150 RPS18 40S ribosomal protein S18 yes yes 2 0.02964 120.87 By MS/MS 9.5 0.5 1 1 2 3567300 3567300 0 5390 1149 5567 12992;12993 10643 10643 1 90287 0 GSAALGGALALAER SLPTSSVPETRGRNKGSAALGGALALAERS KGSAALGGALALAERSSREGSSQRMPRQPS K G S E R S 5 1 0 0 0 0 1 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 14 0 1255.6884 Q6NZ67 Q6NZ67 111 124 MZT2B Mitotic-spindle organizing protein 2B yes yes 2 3.4018E-07 208.74 By MS/MS 9.5 0.5 1 1 2 1084400 1084400 0 5391 1694 5568 12994;12995 10644 10644 1 24168 0 GSAALGGVLALAER SLPTSSVPETRGRDKGSAALGGVLALAERS KGSAALGGVLALAERSNHEGSSQRMPRQPS K G S E R S 4 1 0 0 0 0 1 3 0 0 3 0 0 0 0 1 0 0 0 1 0 0 14 0 1283.7197 Q6P582 Q6P582 111 124 MZT2A Mitotic-spindle organizing protein 2A yes yes 2 4.1325E-07 205.07 By MS/MS 9 0 1 1 111180 111180 0 5392 1711 5569 12996 10645 10645 1 2188.1 0 GSAFAIGSDGLCCQSR GASVLNKWQMNPYDRGSAFAIGSDGLCCQS SAFAIGSDGLCCQSREVKEWHGCRATKGLM R G S S R E 2 1 0 1 2 1 0 3 0 1 1 0 0 1 0 3 0 0 0 0 0 0 16 0 1684.7297 Q92499 Q92499 99 114 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 2.0755E-09 225.79 By MS/MS 4.5 0.5 1 1 2 2894800 2894800 0 5393 2046 5570 12997;12998 10646;10647 10646 2 158610 0 GSAITGPVAK EDNAGVIVNNKGEMKGSAITGPVAKECADL KGEMKGSAITGPVAKECADLWPRIASNAGS K G S A K E 2 0 0 0 0 0 0 2 0 1 0 1 0 0 1 1 1 0 0 1 0 0 10 0 899.50763 P62829 P62829 114 123 RPL23 60S ribosomal protein L23 yes yes 2 0.00075355 128.38 By MS/MS 10 0 1 1 12817000 12817000 0 5394 1173 5571 12999 10648 10648 1 690770 0 GSAYLEAGGTK LRPVYARAGLLSQAKGSAYLEAGGTKVLCA SQAKGSAYLEAGGTKVLCAVSGPRQAEGGE K G S T K V 2 0 0 0 0 0 1 3 0 0 1 1 0 0 0 1 1 0 1 0 0 0 11 0 1052.5138 Q5RKV6 Q5RKV6 51 61 EXOSC6 Exosome complex component MTR3 yes yes 2 0.00079187 125.74 By MS/MS 8 0 1 1 672570 672570 0 5395 1617 5572 13000 10649 10649 1 8491.2 0 GSCGIGGGIGGGSSR MTTCSRQFTSSSSMKGSCGIGGGIGGGSSR GSCGIGGGIGGGSSRISSVLAGGSCRAPST K G S S R I 0 1 0 0 1 0 0 8 0 2 0 0 0 0 0 3 0 0 0 0 0 0 15 0 1277.5782 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 16 30 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 4.0635E-10 187.78 By MS/MS By MS/MS 5.39 2.97 2 2 2 2 1 2 2 1 2 2 9 9 20212000 11753000 8459500 + 5396 39;47 5573 13001;13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018 10650;10651;10652;10653;10654;10655;10656;10657;10658;10659;10660;10661;10662;10663;10664;10665;10666;10667;10668;10669;10670;10671;10672 10655 23 575640 8917500 GSDCVDQFR KSAFSCFHYSTEEIKGSDCVDQFRAMQECM STEEIKGSDCVDQFRAMQECMQKYPDLYPQ K G S F R A 0 1 0 2 1 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1082.4451 Q8N4Q1 Q8N4Q1 84 92 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 2 0.0071098 105.52 By MS/MS 9 0 1 1 252510 252510 0 5397 1918 5574 13019 10673 10673 1 4969.3 0 GSDGAASSYQLK LTTDLEILKAEIEEKGSDGAASSYQLKQLE EEKGSDGAASSYQLKQLEEQNARLKDALVR K G S L K Q 2 0 0 1 0 1 0 2 0 0 1 1 0 0 0 3 0 0 1 0 0 0 12 0 1182.5517 Q14203 Q14203 350 361 DCTN1 Dynactin subunit 1 yes yes 2 0.052347 76.332 By MS/MS 3.5 0.5 1 1 2 859220 859220 0 5398 1432 5575 13020;13021 10674 10674 0 30124 0 GSDQAIITLR EADPGQYRCNGTSSKGSDQAIITLRVRSHL GTSSKGSDQAIITLRVRSHLAALWPFLGIV K G S L R V 1 1 0 1 0 1 0 1 0 2 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1072.5877 P35613 P35613 308 317 BSG Basigin yes yes 2 0.00021509 146.11 By MS/MS 7.5 0.5 1 1 2 3568500 3568500 0 5399 828 5576 13022;13023 10675 10675 1 51950 0 GSDRDGGADGMSAECECNIK FLDREQYGQYALAVRGSDRDGGADGMSAEC GGADGMSAECECNIKILDVNDNIPYMEQSS R G S I K I 2 1 1 3 2 0 2 4 0 1 0 1 1 0 0 2 0 0 0 0 0 0 20 1 2127.8256 Q02413 Q02413 239 258 DSG1 Desmoglein-1 yes yes 3 3.389E-07 141.18 By MS/MS 3.62 2.12 2 1 1 1 1 1 1 8 841180 0 841180 5400 1277 5577;5578 13024;13025;13026;13027;13028;13029;13030;13031 10676;10677;10678;10679;10680;10681;10682;10683 10677 761 7 0 969580 GSDSLIK ADNLVLNLQDESFTRGSDSLIKGKK_____ LQDESFTRGSDSLIKGKK____________ R G S I K G 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 7 0 718.38612 Q99623 Q99623 290 296 PHB2 Prohibitin-2 yes yes 2 0.011278 132.09 By MS/MS By matching 7.67 0.471 1 2 2 1 10106000 10024000 82658 5401 2254 5579 13032;13033;13034 10684;10685 10684 2 138950 111540 GSELEITLTR SPSDKVLIQEKTQLKGSELEITLTRGSSLP KTQLKGSELEITLTRGSSLPGPACAYVNLN K G S T R G 0 1 0 0 0 0 2 1 0 1 2 0 0 0 0 1 2 0 0 0 0 0 10 0 1117.5979 P41252 P41252 1062 1071 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 9.0904E-08 193.38 By MS/MS 3 0 1 1 1608700 1608700 0 5402 871 5580 13035 10686 10686 1 29435 0 GSELQLPFQACLK PLEVHLLDFPNIVIKGSELQLPFQACLKVE IKGSELQLPFQACLKVEKFGDLILKATEPQ K G S L K V 1 0 0 0 1 2 1 1 0 0 3 1 0 1 1 1 0 0 0 0 0 0 13 0 1489.7599 Q6P2Q9 Q6P2Q9 1886 1898 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00010918 172.56 By MS/MS 2 0 1 1 149200 149200 0 5403 1708 5581 13036 10687 10687 1 50467 0 GSELQNYFTK YDDPPDWQEILTYFRGSELQNYFTKILEDD LTYFRGSELQNYFTKILEDDLKAIIKPQYV R G S T K I 0 0 1 0 0 1 1 1 0 0 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1185.5666 P61221 P61221 149 158 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 2 0.00013993 151.22 By MS/MS 3.5 2.06 1 1 1 1 4 3845600 3845600 0 5404 1117 5582 13037;13038;13039;13040 10688;10689;10690 10690 3 134280 0 GSFADLGLEPR RAQQEAPAVRKLSSKGSFADLGLEPRVLHA LSSKGSFADLGLEPRVLHALQEAAPEVVQP K G S P R V 1 1 0 1 0 0 1 2 0 0 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1160.5826 Q9NUL7 Q9NUL7 126 136 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.00075922 126.39 By MS/MS 5.5 0.5 1 1 2 5576000 5576000 0 5405 2582 5583 13041;13042 10691 10691 1 39870 0 GSFSEQGINEFLR MAAINARKMKFALLKGSFSEQGINEFLREL LKGSFSEQGINEFLRELSFGRGSTAPVGGG K G S L R E 0 1 1 0 0 1 2 2 0 1 1 0 0 2 0 2 0 0 0 0 0 0 13 0 1482.7103 Q15084 Q15084 374 386 PDIA6 Protein disulfide-isomerase A6 yes yes 2 2.263E-24 282.61 By MS/MS 6.5 0.5 1 1 2 10135000 10135000 0 5406 1488 5584 13043;13044 10692;10693 10692 2 70764 0 GSFSSTAAQDAQGQR TCCWWPQGSQGKTLRGSFSSTAAQDAQGQR GSFSSTAAQDAQGQRIGHFEFHGDHALLCV R G S Q R I 3 1 0 1 0 3 0 2 0 0 0 0 0 1 0 3 1 0 0 0 0 0 15 0 1509.6808 Q86V85 Q86V85 27 41 GPR180 Integral membrane protein GPR180 yes yes 2 4.4626E-07 210.44 By MS/MS 2 0.816 1 1 1 3 904650 904650 0 5407 1828 5585 13045;13046;13047 10694 10694 1 236020 0 GSGDVCGVLALAPGTNAGDGAR LPPPGGLGGPWVAVRGSGDVCGVLALAPGT VLALAPGTNAGDGARVTRLSVSRWHRRRGV R G S A R V 4 1 1 2 1 0 0 6 0 0 2 0 0 0 1 1 1 0 0 2 0 0 22 0 2013.9538 Q8WUY8 Q8WUY8 103 124 NAT14 N-acetyltransferase 14 yes yes 2 5.1667E-07 198.61 By MS/MS 9 0 1 1 2776400 2776400 0 5408 2020 5586 13048 10695 10695 1 54640 0 GSGEGQGQILQR LADYFVLVAFGPHPRGSGEGQGQILQRFPE HPRGSGEGQGQILQRFPEKDWEDNPFPQGI R G S Q R F 0 1 0 0 0 3 1 4 0 1 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1228.616 O95248 O95248 19 30 SBF1 Myotubularin-related protein 5 yes yes 2 0.00015619 170.47 By MS/MS 2 0 1 1 217750 217750 0 5409 398 5587 13049 10696 10696 1 73653 0 GSGGGSSGGSIGGR RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS R G S G R G 0 1 0 0 0 0 0 8 0 1 0 0 0 0 0 4 0 0 0 0 0 0 14 0 1091.4956 CON__P04264;P04264 P04264 603 616 KRT1 Keratin, type II cytoskeletal 1 no no 1;2 5.4639E-14 213.35 By MS/MS By MS/MS 5.25 2.79 2 3 3 3 2 2 3 2 2 2 11 13 654330000 281410000 372920000 + 5410 471;45 5588 13050;13051;13052;13053;13054;13055;13056;13057;13058;13059;13060;13061;13062;13063;13064;13065;13066;13067;13068;13069;13070;13071;13072;13073 10697;10698;10699;10700;10701;10702;10703;10704;10705;10706;10707;10708;10709;10710;10711;10712;10713;10714;10715;10716;10717;10718;10719;10720;10721;10722;10723;10724;10725;10726;10727;10728;10729;10730;10731;10732;10733;10734;10735;10736;10737;10738;10739;10740;10741 10715 45 21249000 217650000 GSGGGSSGGSIGGRGSSSGGVK RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG GGSIGGRGSSSGGVKSSGGSSSVKFVSTTY R G S V K S 0 1 0 0 0 0 0 11 0 1 0 1 0 0 0 7 0 0 0 1 0 0 22 1 1750.8194 CON__P04264;P04264 P04264 603 624 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 2.662E-11 195.6 By MS/MS By MS/MS 5.45 2.94 4 3 3 3 4 4 2 3 3 4 19 14 54701000 27271000 27430000 + 5411 471;45 5589 13074;13075;13076;13077;13078;13079;13080;13081;13082;13083;13084;13085;13086;13087;13088;13089;13090;13091;13092;13093;13094;13095;13096;13097;13098;13099;13100;13101;13102;13103;13104;13105;13106 10742;10743;10744;10745;10746;10747;10748;10749;10750;10751;10752;10753;10754;10755;10756;10757;10758;10759;10760;10761;10762;10763 10742 22 1685100 29231000 GSGGGSSGGSIGGRGSSSGGVKSSGGSSSVK RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG SSGGVKSSGGSSSVKFVSTTYSGVTR____ R G S V K F 0 1 0 0 0 0 0 13 0 1 0 2 0 0 0 12 0 0 0 2 0 0 31 2 2527.1859 P04264 P04264 603 633 KRT1 Keratin, type II cytoskeletal 1 yes yes 3 9.3684E-08 98.747 By MS/MS 3.75 2.68 1 1 1 1 4 1690000 0 1690000 5412 471 5590 13107;13108;13109;13110 10764;10765;10766;10767;10768 10765 5 0 2286200 GSGGGSSGGSIGGRGSSSGGVKSSGGSSSVR RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG SSGGVKSSGGSSSVRFVSTTYSGVTR____ R G S V R F 0 2 0 0 0 0 0 13 0 1 0 1 0 0 0 12 0 0 0 2 0 0 31 2 2555.192 CON__P04264 CON__P04264 603 633 yes yes 3;4 3.7849E-15 157.61 By matching By MS/MS 4.1 2.74 2 3 1 1 1 2 1 9 3615800 73604 3542200 + 5413 45 5591 13111;13112;13113;13114;13115;13116;13117;13118;13119;13120 10769;10770;10771;10772;10773;10774;10775 10770 7 24896 4745800 GSGGLGGACGGAGFGSR VSRSGFSSISVSRSRGSGGLGGACGGAGFG GGLGGACGGAGFGSRSLYGLGGSKRISIGG R G S S R S 2 1 0 0 1 0 0 9 0 0 1 0 0 1 0 2 0 0 0 0 0 0 17 0 1423.6263 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 43 59 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 1.2429E-08 208.51 By MS/MS By MS/MS 5.39 2.97 2 2 2 2 1 2 2 1 2 2 8 10 29949000 13043000 16907000 + 5414 44;56;40 5592 13121;13122;13123;13124;13125;13126;13127;13128;13129;13130;13131;13132;13133;13134;13135;13136;13137;13138 10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792 10784 16 533430 21328000 GSGIFDESTPVQTR EPQNIPKRTNPPGGKGSGIFDESTPVQTRQ KGSGIFDESTPVQTRQHLNPPGGKTSDIFG K G S T R Q 0 1 0 1 0 1 1 2 0 1 0 0 0 1 1 2 2 0 0 1 0 0 14 0 1492.7158 Q9H910 Q9H910 68 81 HN1L Hematological and neurological expressed 1-like protein yes yes 2 2.7359E-07 212.09 By MS/MS 9 0 1 1 633900 633900 0 5415 2478 5593 13139 10793;10794 10794 2 12475 0 GSGIQWDLR AEEALNYGFSGVMLRGSGIQWDLRKTQPYD SGVMLRGSGIQWDLRKTQPYDVYDQVEFDV R G S L R K 0 1 0 1 0 1 0 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1030.5196 O75306 O75306 295 303 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.00011491 143.37 By MS/MS 7 0 1 1 945670 945670 0 5416 308 5594 13140 10795 10795 1 14845 0 GSGNLEAIHIIK DHFTKLAVEAVLRLKGSGNLEAIHIIKKLG RLKGSGNLEAIHIIKKLGGSLADSYLDEGF K G S I K K 1 0 1 0 0 0 1 2 1 3 1 1 0 0 0 1 0 0 0 0 0 0 12 0 1250.6983 P78371 P78371 192 203 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00038811 138.22 By MS/MS 6.5 0.5 1 1 2 17047000 17047000 0 5417 1222 5595 13141;13142 10796 10796 1 123090 0 GSGNLEAIHIIKK DHFTKLAVEAVLRLKGSGNLEAIHIIKKLG LKGSGNLEAIHIIKKLGGSLADSYLDEGFL K G S K K L 1 0 1 0 0 0 1 2 1 3 1 2 0 0 0 1 0 0 0 0 0 0 13 1 1378.7932 P78371 P78371 192 204 CCT2 T-complex protein 1 subunit beta yes yes 2 0.016571 104.07 By MS/MS 6 0 1 1 3349500 3349500 0 5418 1222 5596 13143 10797 10797 1 23025 0 GSGQGDSLYPVGYLDK ELSGPGGGSRGRSDRGSGQGDSLYPVGYLD SGQGDSLYPVGYLDKQVPDTSVQETDRILV R G S D K Q 0 0 0 2 0 1 0 4 0 0 2 1 0 0 1 2 0 0 2 1 0 0 16 0 1654.7839 Q5J8M3 Q5J8M3 35 50 EMC4 ER membrane protein complex subunit 4 yes yes 2 1.524E-17 269.14 By MS/MS 9 0 1 1 1998800 1998800 0 5419 1604 5597 13144 10798 10798 1 39338 0 GSGSGQSPSSGQHGTGFGR QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT GQSPSSGQHGTGFGRSSSSGPYVSGSGYSS R G S G R S 0 1 0 0 0 2 0 7 1 0 0 0 0 1 1 5 1 0 0 0 0 0 19 0 1746.767 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 430 448 HRNR Hornerin yes no 2;3 5.4881E-14 203.85 By MS/MS By MS/MS 3.86 2.47 1 2 1 1 1 1 1 6 1544800 443010 1101800 + 5420 73 5598 13145;13146;13147;13148;13149;13150;13151 10799;10800;10801;10802;10803;10804;10805;10806 10801 8 149840 817820 GSGSGQSPSYGR RHGSGSGQSPGHGQRGSGSGQSPSYGRHGS GQRGSGSGQSPSYGRHGSGSGRSSSSGRHG R G S G R H 0 1 0 0 0 1 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 12 0 1138.5003 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 897 908 HRNR Hornerin yes no 2 4.8558E-20 242.97 By MS/MS By MS/MS 5.19 2.92 2 2 1 2 2 2 1 1 1 2 6 10 14690000 3484100 11205000 + 5421 73 5599 13152;13153;13154;13155;13156;13157;13158;13159;13160;13161;13162;13163;13164;13165;13166;13167 10807;10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819;10820 10811 14 282420 8366700 GSGSRQSPSYGR RQGSGSGQSPGHGQRGSGSRQSPSYGRHGS GQRGSGSRQSPSYGRHGSGSGRSSSSGQHG R G S G R H 0 2 0 0 0 1 0 3 0 0 0 0 0 0 1 4 0 0 1 0 0 0 12 1 1237.58 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1132 1143 HRNR Hornerin yes no 3 0.029161 86.114 By matching By MS/MS 4.5 2.63 1 1 1 1 1 1 2 4 1571800 1202200 369580 + 5422 73 5600 13168;13169;13170;13171;13172;13173 10821;10822 10822 2 21720 534330 GSGSSQSSGYGR QHGASSGQSSSHGQHGSGSSQSSGYGRQGS GQHGSGSSQSSGYGRQGSGSGQSPGHGQRG H G S G R Q 0 1 0 0 0 1 0 4 0 0 0 0 0 0 0 5 0 0 1 0 0 0 12 0 1128.4796 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1106 1117 HRNR Hornerin yes no 2 7.1163E-09 199.68 By MS/MS By MS/MS 3.78 1.87 1 2 1 2 1 1 1 3 6 2003600 481970 1521600 + 5423 73 5601 13174;13175;13176;13177;13178;13179;13180;13181;13182 10823;10824;10825;10826;10827;10828;10829 10825 7 41267 805580 GSGTASDDEFENLR EVANCCIRIALPAPRGSGTASDDEFENLRI RGSGTASDDEFENLRIKGPNAVQLVKTTPL R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 2.8789E-07 211.37 By MS/MS 1.5 0.5 1 1 2 573250 573250 0 5424 1802 5602 13183;13184 10830 10830 1 168170 0 GSHGHGRQER HGHSHGHGHAHSHTRGSHGHGRQERSTKEK HSHTRGSHGHGRQERSTKEKQSSEEEEKET R G S E R S 0 2 0 0 0 1 1 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 10 1 1119.5282 Q92504 Q92504 259 268 SLC39A7 Zinc transporter SLC39A7 yes yes 2 0.0074739 113.71 By MS/MS 7 0 1 1 99097 99097 0 5425 2048 5603 13185 10831 10831 1 1555.7 0 GSHTDAPDTATGNCLLQR TSFDENSFAARLIQRGSHTDAPDTATGNCL TDAPDTATGNCLLQRAAGAGNEAAALFLAT R G S Q R A 2 1 1 2 1 1 0 2 1 0 2 0 0 0 1 1 3 0 0 0 0 0 18 0 1912.8697 Q9P2R3 Q9P2R3 447 464 ANKFY1 Rabankyrin-5 yes yes 3 0.000548 115.26 By MS/MS By matching 3.75 0.829 2 1 1 3 1 2767700 2504300 263480 5426 2689 5604 13186;13187;13188;13189 10832 10832 1 81231 33537 GSIDEVDKR VELLVMKALSVGLVKGSIDEVDKRVHMTWV SVGLVKGSIDEVDKRVHMTWVQPRVLDLQQ K G S K R V 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 1 1017.5091 Q9UNM6 Q9UNM6 322 330 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2;3 0.014557 93.598 By MS/MS 7 0 2 2 8837400 8837400 0 5427 2791 5605 13190;13191 10833;10834 10833 2 138730 0 GSIIISPCVVCR GPFVMRSTCRRCGGRGSIIISPCVVCRGAG GGRGSIIISPCVVCRGAGQAKQKKRVMIPV R G S C R G 0 1 0 0 2 0 0 1 0 3 0 0 0 0 1 2 0 0 0 2 0 0 12 0 1359.7003 Q96EY1 Q96EY1 282 293 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.00016073 153.05 By MS/MS 7.5 0.5 1 1 2 8224100 8224100 0 5428 2150 5606 13192;13193 10835;10836 10835 1 126840 0 GSITISAEEIKDNR LTRPLVMKTGRPAGKGSITISAEEIKDNRV KGSITISAEEIKDNRVVLFEMEARKLDNKD K G S N R V 1 1 1 1 0 0 2 1 0 3 0 1 0 0 0 2 1 0 0 0 0 0 14 1 1531.7842 O75131 O75131 126 139 CPNE3 Copine-3 yes yes 2 0.0067085 118.77 By MS/MS 6 0 1 1 2646300 2646300 0 5429 294 5607 13194 10837 10837 1 18192 0 GSKDHNIR HEKAPAFRDYVAVARGSKDHNIRAQEPESG DYVAVARGSKDHNIRAQEPESGLSEETQVK R G S I R A 0 1 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 8 1 925.47298 P78527 P78527 4083 4090 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.011541 129.42 By MS/MS 2.8 1.17 1 1 1 2 5 457560 457560 0 5430 1225 5608 13195;13196;13197;13198;13199 10838;10839;10840;10841;10842 10839 5 81830 0 GSLASLDSLR PSDQYYWAPLAQHERGSLASLDSLRKGGPP AQHERGSLASLDSLRKGGPPPPNWRQPELP R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 O60716 O60716 345 354 CTNND1 Catenin delta-1 yes yes 2 0.00075884 128.28 By MS/MS 4.5 0.5 1 1 2 1811600 1811600 0 5431 272 5609 13200;13201 10843 10843 1 149650 0 GSLESPATDVFGSTEEGEKR RWSTLVEDYGMELRKGSLESPATDVFGSTE PATDVFGSTEEGEKRWKDLKNRVVEHNIRI K G S K R W 1 1 0 1 0 0 4 3 0 0 1 1 0 1 1 3 2 0 0 1 0 0 20 1 2094.9706 O00232 O00232 331 350 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 1.6006E-18 255.39 By MS/MS 6 0 1 1 4228700 4228700 0 5432 94 5610 13202 10844 10844 1 29069 0 GSLGGGFSSGGFSGGSFSR GGGGGVSSLRISSSKGSLGGGFSSGGFSGG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645;P13645 CON__P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 7.0391E-36 273.07 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 95179000 74235000 20944000 + 5433 50 5611 13203;13204;13205;13206;13207;13208;13209;13210;13211;13212;13213;13214;13215;13216;13217;13218;13219;13220;13221;13222 10845;10846;10847;10848;10849;10850;10851;10852;10853;10854;10855;10856;10857;10858;10859;10860;10861;10862;10863;10864;10865;10866;10867;10868;10869;10870;10871 10848 27 4401700 16201000 GSLKEELLK ______________________________ ______________________________ M G S L K A 0 0 0 0 0 0 2 1 0 0 3 2 0 0 0 1 0 0 0 0 0 0 9 1 1015.5914 Q9UH65 Q9UH65 2 10 SWAP70 Switch-associated protein 70 yes yes 2 0.013042 83.948 By MS/MS 5 0 1 1 757830 757830 0 5434 2726 5612 13223 10872 10872 1 7600.6 0 GSLLQQSL LTSLYALYNNWEHMKGSLLQQSL_______ NNWEHMKGSLLQQSL_______________ K G S S L - 0 0 0 0 0 2 0 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 8 0 844.46543 O14925 O14925 202 209 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 2 3.5984E-06 185.55 By MS/MS 9.5 0.5 1 1 2 1747900 1747900 0 5435 145 5613 13224;13225 10873 10873 1 37410 0 GSLPSGTTIEWLEPK DCFHILQLQHASHQKGSLPSGTTIEWLEPK GSLPSGTTIEWLEPKISLSNHYKNGADQPF K G S P K I 0 0 0 0 0 0 2 2 0 1 2 1 0 0 2 2 2 1 0 0 0 0 15 0 1613.8301 Q9BXB4 Q9BXB4 285 299 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 0.00045555 145.09 By MS/MS 4.5 0.5 1 1 2 278760 278760 0 5436 2356 5614 13226;13227 10874;10875 10874 2 21493 0 GSLVDYLR EEKGGLYIVTEYMAKGSLVDYLRSRGRSVL VTEYMAKGSLVDYLRSRGRSVLGGDCLLKF K G S L R S 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 8 0 921.49198 P41240 P41240 272 279 CSK Tyrosine-protein kinase CSK yes yes 2 0.038568 86.833 By MS/MS 6.5 0.5 1 1 2 884780 884780 0 5437 869 5615 13228;13229 10876 10876 1 8084.2 0 GSMAGSTGVHDTVVNQLLSK HIIIFDEIDAICKQRGSMAGSTGVHDTVVN STGVHDTVVNQLLSKIDGVEQLNNILVIGM R G S S K I 1 0 1 1 0 1 0 3 1 0 2 1 1 0 0 3 2 0 0 3 0 0 20 0 1999.9997 P46459 P46459 338 357 NSF Vesicle-fusing ATPase yes yes 3 0.0054608 83.891 By MS/MS 5 0 1 1 2127200 2127200 0 5438 912 5616 13230 10877 10877 478 1 21335 0 GSNKLVIEEAER TGCASPGKTVTIVVRGSNKLVIEEAERSIH VVRGSNKLVIEEAERSIHDALCVIRCLVKK R G S E R S 1 1 1 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 1 1343.7045 P50991 P50991 392 403 CCT4 T-complex protein 1 subunit delta yes yes 2;3 2.8486E-05 185.3 By MS/MS By matching 7.12 1.05 3 2 2 1 7 1 72935000 72878000 56172 5439 985 5617 13231;13232;13233;13234;13235;13236;13237;13238 10878;10879;10880;10881;10882;10883 10879 6 534600 57561 GSNLDAPEPYR DLYPEHYRKYSDYIKGSNLDAPEPYRIGRI DYIKGSNLDAPEPYRIGRIKEIFCPKKSNG K G S Y R I 1 1 1 1 0 0 1 1 0 0 1 0 0 0 2 1 0 0 1 0 0 0 11 0 1217.5677 P26358 P26358 982 992 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.00034345 134.68 By MS/MS 2.5 0.5 1 1 2 588960 588960 0 5440 730 5618 13239;13240 10884 10884 1 111890 0 GSNMDFREPTEEER GPPMGSRFRDGPPLRGSNMDFREPTEEERA RGSNMDFREPTEEERAQRPRLQLKPRTVAT R G S E R A 0 2 1 1 0 0 4 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 14 1 1695.7159 Q15056 Q15056 192 205 EIF4H Eukaryotic translation initiation factor 4H yes yes 3 0.002963 107.65 By MS/MS 8 0 2 2 851840 851840 0 5441 1485 5619;5620 13241;13242 10885;10886 10885 867 2 10754 0 GSNNVALGYDEGSIIVK LNYGMERVWCVASLRGSNNVALGYDEGSII NNVALGYDEGSIIVKLGREEPAMSMDANGK R G S V K L 1 0 2 1 0 0 1 3 0 2 1 1 0 0 0 2 0 0 1 2 0 0 17 0 1734.8788 P35606 P35606 282 298 COPB2 Coatomer subunit beta yes yes 2 8.7211E-07 247.11 By MS/MS By matching 3.2 1.33 1 2 1 1 4 1 4259200 4205300 53818 5442 826 5621 13243;13244;13245;13246;13247 10887;10888 10887 2 553890 6850.3 GSNSLPLLR LLHAATYTKKVLDARGSNSLPLLRSVLDKL KVLDARGSNSLPLLRSVLDKLSANQQNILK R G S L R S 0 1 1 0 0 0 0 1 0 0 3 0 0 0 1 2 0 0 0 0 0 0 9 0 955.54508 P57088 P57088 135 143 TMEM33 Transmembrane protein 33 yes yes 2 0.0033587 112.11 By MS/MS By matching 9 0.707 1 2 1 3 1 14797000 14758000 38658 5443 1078 5622 13248;13249;13250;13251 10889;10890 10890 2 262700 88153 GSNTIASAAADK NIPALVRLLQAFLERGSNTIASAAADKIPG LERGSNTIASAAADKIPGLLGVFQKLIASK R G S D K I 4 0 1 1 0 0 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 0 12 0 1104.5411 P55060 P55060 715 726 CSE1L Exportin-2 yes yes 2 0.032316 78.705 By MS/MS 4 0 1 1 295720 295720 0 5444 1053 5623 13252 10891 10891 1 27830 0 GSNTTSHLHQAVAK SVLQHVLGAGPHVKRGSNTTSHLHQAVAKA RGSNTTSHLHQAVAKATQQPFDVSAFNASY R G S A K A 2 0 1 0 0 1 0 1 2 0 1 1 0 0 0 2 2 0 0 1 0 0 14 0 1449.7324 P22695 P22695 302 315 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 4.9672E-05 187.85 By MS/MS 7.33 0.471 2 1 3 5722600 5722600 0 5445 696 5624 13253;13254;13255 10892;10893 10893 2 89458 0 GSNWVPR SSRIRFMLQDVLDLRGSNWVPRRGDQGPKT LQDVLDLRGSNWVPRRGDQGPKTIDQIHKE R G S P R R 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 7 0 814.40859 Q04637 Q04637 987 993 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.03068 104.21 By MS/MS 3 0.816 1 1 1 3 5500500 5500500 0 5446 1291 5625 13256;13257;13258 10894 10894 1 1551000 0 GSPCSEEAGTLR VKGKVAGALLRAIFKGSPCSEEAGTLRRRK IFKGSPCSEEAGTLRRRKIYTCCIQLVESG K G S L R R 1 1 0 0 1 0 2 2 0 0 1 0 0 0 1 2 1 0 0 0 0 0 12 0 1262.5561 Q9NVI1 Q9NVI1 53 64 FANCI Fanconi anemia group I protein yes yes 2 0.021761 84.31 By MS/MS 3 0 1 1 421560 421560 0 5447 2597 5626 13259 10895 10895 1 7713.4 0 GSPDITCVFLNVER IFGKGNFEHLTEKIRGSPDITCVFLNVERM RGSPDITCVFLNVERMAAPTKKELEAAWGV R G S E R M 0 1 1 1 1 0 1 1 0 1 1 0 0 1 1 1 1 0 0 2 0 0 14 0 1605.7821 O43824 O43824 167 180 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.00046531 173.72 By MS/MS 6 0 1 1 1633200 1633200 0 5448 240 5627 13260 10896 10896 1 11227 0 GSPEDKDSEIELLTAGKK NSVLEVEKSLVLAEKGSPEDKDSEIELLTA EDKDSEIELLTAGKKFRILATMNPGGDFGK K G S K K F 1 0 0 2 0 0 3 2 0 1 2 3 0 0 1 2 1 0 0 0 0 0 18 2 1915.9739 Q9NU22 Q9NU22 1497 1514 MDN1 Midasin yes yes 3 0.00096152 127.2 By MS/MS 1.5 0.5 1 1 2 517030 517030 0 5449 2580 5628 13261;13262 10897 10897 1 154300 0 GSPGVPSFAAGPPISEGK KIYPVGYFTKENPVKGSPGVPSFAAGPPIS GVPSFAAGPPISEGKYFSSNPIIPSQSAAS K G S G K Y 2 0 0 0 0 0 1 4 0 1 0 1 0 1 4 3 0 0 0 1 0 0 18 0 1653.8362 Q15517 Q15517 332 349 CDSN Corneodesmosin yes yes 2 1.5125E-06 155.08 By MS/MS 3 0 1 1 764190 0 764190 5450 1517 5629 13263 10898;10899;10900;10901 10898 4 0 97270 GSPLGEVVEQGITR VQEKYVWNKRESTEKGSPLGEVVEQGITRV KGSPLGEVVEQGITRVRNATDAVGIVLKEL K G S T R V 0 1 0 0 0 1 2 3 0 1 1 0 0 0 1 1 1 0 0 2 0 0 14 0 1440.7573 P51398 P51398 219 232 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 1.7682E-16 251.75 By MS/MS 7.5 0.5 1 1 2 10259000 10259000 0 5451 993 5630 13264;13265 10902;10903;10904 10903 3 158890 0 GSPLLIGVR FKSVHFPGQAVGTRRGSPLLIGVRSEHKLS AVGTRRGSPLLIGVRSEHKLSTDHIPILYR R G S V R S 0 1 0 0 0 0 0 2 0 1 2 0 0 0 1 1 0 0 0 1 0 0 9 0 910.56 Q06210;O94808 Q06210 204 212 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes no 2 0.0019318 122.18 By MS/MS 5 0 1 1 1394500 1394500 0 5452 1295 5631 13266 10905 10905 1 13986 0 GSPLNAAPYGIESMSQDTEVR EETQEDKDCPIKEEKGSPLNAAPYGIESMS APYGIESMSQDTEVRSRVVGGSLRGAQAAS K G S V R S 2 1 1 1 0 1 2 2 0 1 1 0 1 0 2 3 1 0 1 1 0 0 21 0 2221.0321 P18031 P18031 351 371 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 4.1948E-06 183.76 By MS/MS 6 0 1 1 2401800 2401800 0 5453 649 5632 13267 10906 10906 1 16510 0 GSPLVVISQGK NSSLEYNIFEGMECRGSPLVVISQGKIVLE MECRGSPLVVISQGKIVLEDGTLHVTEGSG R G S G K I 0 0 0 0 0 1 0 2 0 1 1 1 0 0 1 2 0 0 0 2 0 0 11 0 1083.6288 Q16555 Q16555 441 451 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 2 0.038008 70.942 By MS/MS 5 0 1 1 658710 658710 0 5454 1552 5633 13268 10907 10907 0 6606.5 0 GSPNTASAEATLPR LRDKIASYSSLREARGSPNTASAEATLPRW RGSPNTASAEATLPRWRAGEQAQPPGDQEP R G S P R W 3 1 1 0 0 0 1 1 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1370.679 Q6PJG6 Q6PJG6 741 754 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.00034869 166.11 By MS/MS 5 0 1 1 664830 664830 0 5455 1720 5634 13269 10908 10908 1 6667.9 0 GSPVVTHDLLR NQVSTIVSLLSTLCRGSPVVTHDLLRSELP TLCRGSPVVTHDLLRSELPDSIESALQGDE R G S L R S 0 1 0 1 0 0 0 1 1 0 2 0 0 0 1 1 1 0 0 2 0 0 11 0 1192.6564 Q9ULT8 Q9ULT8 289 299 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0018999 112.11 By MS/MS 2 0.816 1 1 1 3 1205500 1205500 0 5456 2774 5635 13270;13271;13272 10909;10910 10910 2 305000 0 GSQFGQSCCLR NPIEKNLQMWEEMKKGSQFGQSCCLRAKID EMKKGSQFGQSCCLRAKIDMSSNNGCMRDP K G S L R A 0 1 0 0 2 2 0 2 0 0 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1298.5496 P07814 P07814 329 339 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.7358E-06 181.53 By MS/MS 3.5 1.12 1 1 1 1 4 2955600 2955600 0 5457 512 5636 13273;13274;13275;13276 10911;10912 10911 2 90729 0 GSQFTSKEER QATQERTDLYAKQGRGSQFTSKEERDKWIK AKQGRGSQFTSKEERDKWIKKELKSLDQAI R G S E R D 0 1 0 0 0 1 2 1 0 0 0 1 0 1 0 2 1 0 0 0 0 0 10 1 1167.552 Q9UQE7 Q9UQE7 382 391 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0052705 122.33 By MS/MS 3 0 1 1 324610 324610 0 5458 2807 5637 13277 10913 10913 1 5939.5 0 GSQGPLPFHEK TRFAIYETVRDRVAKGSQGPLPFHEKVLLG RVAKGSQGPLPFHEKVLLGSVSGLAGGFVG K G S E K V 0 0 0 0 0 1 1 2 1 0 1 1 0 1 2 1 0 0 0 0 0 0 11 0 1195.5986 Q9UBX3 Q9UBX3 92 102 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.00052204 131.12 By MS/MS 6 3.56 1 1 1 3 3140900 3140900 0 5459 2709 5638 13278;13279;13280 10914;10915 10915 2 83408 0 GSRGGSGGSYGGGGSGGGYGGGSGSR IGLGGRGGSGGSYGRGSRGGSGGSYGGGGS GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G S S R G 0 2 0 0 0 0 0 16 0 0 0 0 0 0 0 6 0 0 2 0 0 0 26 1 2090.875 P35527;CON__P35527 P35527 488 513 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 1.651E-13 214.86 By MS/MS By MS/MS 4.5 2.72 2 3 1 4 1 1 1 1 1 1 4 12 6830500 1302800 5527700 + 5460 822 5639 13281;13282;13283;13284;13285;13286;13287;13288;13289;13290;13291;13292;13293;13294;13295;13296 10916;10917;10918;10919;10920;10921;10922;10923;10924;10925;10926;10927;10928;10929 10917 14 181790 7754800 GSRPIDTSR PLVDDGGWNTVPISKGSRPIDTSRLTKITK TVPISKGSRPIDTSRLTKITKPGSIDSNNQ K G S S R L 0 2 0 1 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 9 1 987.50976 Q04637 Q04637 1060 1068 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.036132 109.48 By MS/MS By matching 3.42 1.75 1 4 2 2 1 1 1 11 1 24578000 24557000 21015 5461 1291 5640 13297;13298;13299;13300;13301;13302;13303;13304;13305;13306;13307;13308 10930;10931;10932 10930 3 5906100 29720 GSSASLVLK SHPADSVVSVLNKEKGSSASLVLKRLGFKG VLNKEKGSSASLVLKRLGFKGVWKGLFARI K G S L K R 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 3 0 0 0 1 0 0 9 0 860.49673 Q00325 Q00325 296 304 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.013187 94.85 By MS/MS 2 0.816 1 1 1 3 1465000 1465000 0 5462 1259 5641 13309;13310;13311 10933 10933 1 368590 0 GSSFEMTDDDSAIR SMTQQDSHAPLRDSRGSSFEMTDDDSAIRA RGSSFEMTDDDSAIRALTQFPLPKNLLAKV R G S I R A 1 1 0 3 0 0 1 1 0 1 0 0 1 1 0 3 1 0 0 0 0 0 14 0 1529.6304 Q7L2E3 Q7L2E3 224 237 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 5.1405E-05 187.31 By MS/MS 3.5 0.5 1 1 2 1239200 1239200 0 5463 1761 5642 13312;13313 10934 10934 1 48651 0 GSSGDTANPFPVPSLPNGNSKPGK RRVEGKGSRSSSEHKGSSGDTANPFPVPSL FPVPSLPNGNSKPGKPQVKFDKQQADLHMR K G S G K P 1 0 3 1 0 0 0 4 0 0 1 2 0 1 5 4 1 0 0 1 0 0 24 1 2324.1397 P51825 P51825 931 954 AFF1 AF4/FMR2 family member 1 yes yes 3 0.05223 37.169 By MS/MS 2.5 0.5 1 1 2 2605400 0 2605400 5464 1009 5643 13314;13315 10935 10935 1 0 1466100 GSSGGGCFGGSSGGYGGLGGFGGGSFR GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY GGYGGLGGFGGGSFRGSYGSSSFGGSYGGS R G S F R G 0 1 0 0 1 0 0 15 0 0 1 0 0 3 0 5 0 0 1 0 0 0 27 0 2341.9771 CON__P13645;P13645 CON__P13645 60 86 KRT10 Keratin, type I cytoskeletal 10 yes no 2 5.9372E-14 197.67 By MS/MS By matching 4.29 3.45 2 1 1 1 1 1 6 1 1619900 1484500 135430 + 5465 50 5644 13316;13317;13318;13319;13320;13321;13322 10936 10936 1 214920 135430 GSSGGSGAKPSDAASEAAR NNQLFAPGGRLSWGKGSSGGSGAKPSDAAS GSGAKPSDAASEAARPATSTLNRFSALQQA K G S A R P 5 1 0 1 0 0 1 4 0 0 0 1 0 0 1 5 0 0 0 0 0 0 19 1 1661.7605 Q04637 Q04637 1096 1114 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 9.4844E-05 152.9 By MS/MS 2 0.632 1 3 1 5 5707600 5707600 0 5466 1291 5645 13323;13324;13325;13326;13327 10937;10938;10939;10940 10938 4 1828000 0 GSSGGSGAKPSDAASEAARPATSTLNR NNQLFAPGGRLSWGKGSSGGSGAKPSDAAS AASEAARPATSTLNRFSALQQAVPTESTDN K G S N R F 6 2 1 1 0 0 1 4 0 0 1 1 0 0 2 6 2 0 0 0 0 0 27 2 2502.2059 Q04637 Q04637 1096 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3;4 0.00018013 84.156 By MS/MS 2.6 0.8 3 1 1 5 20638000 20638000 0 5467 1291 5646 13328;13329;13330;13331;13332 10941;10942;10943;10944 10942 4 6722700 0 GSSGLGGGSSR MTTSIRQFTSSSSIKGSSGLGGGSSRTSCR SSIKGSSGLGGGSSRTSCRLSGGLGAGSCR K G S S R T 0 1 0 0 0 0 0 5 0 0 1 0 0 0 0 4 0 0 0 0 0 0 11 0 920.43117 CON__Q04695;Q04695 CON__Q04695 16 26 KRT17 Keratin, type I cytoskeletal 17 no no 2 0.015565 104.05 By MS/MS 4 3.54 1 1 1 1 4 409760 0 409760 + 5468 57 5647 13333;13334;13335;13336 10945;10946;10947 10945 3 0 334660 GSSGVGLTAAVLR YIDRLAPRSQYTTGRGSSGVGLTAAVLRDS GRGSSGVGLTAAVLRDSVSGELTLEGGALV R G S L R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 0 2 1 0 0 2 0 0 13 0 1186.667 P33993 P33993 408 420 MCM7 DNA replication licensing factor MCM7 yes yes 2 1.809E-05 190.57 By MS/MS 4.5 0.5 1 1 2 6418400 6418400 0 5469 808 5648 13337;13338 10948;10949 10949 2 275330 0 GSSGVGLTAAVTTDQETGER YVLCTAPRAIPTTGRGSSGVGLTAAVTTDQ GLTAAVTTDQETGERRLEAGAMVLADRGVV R G S E R R 2 1 0 1 0 1 2 4 0 0 1 0 0 0 0 2 4 0 0 2 0 0 20 0 1934.9181 P25205 P25205 372 391 MCM3 DNA replication licensing factor MCM3 yes yes 2 2.2444E-90 393.84 By MS/MS 5 0.816 1 1 1 3 4777200 4777200 0 5470 719 5649 13339;13340;13341 10950 10950 1 356800 0 GSSKQQSEEDLLLQDFSR ______________________________ KQQSEEDLLLQDFSRNLSAKSSALFFGNAF K G S S R N 0 1 0 2 0 3 2 1 0 0 3 1 0 1 0 4 0 0 0 0 0 0 18 1 2065.9916 Q9UNL2 Q9UNL2 5 22 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 3.0437E-44 332.7 By MS/MS 9 0 2 2 1207500 1207500 0 5471 2790 5650 13342;13343 10951;10952 10952 2 23765 0 GSSLVLYSDKK TSISADTHKYGYAPKGSSLVLYSDKKYRNY YAPKGSSLVLYSDKKYRNYQFFVDTDWQGG K G S K K Y 0 0 0 1 0 0 0 1 0 0 2 2 0 0 0 3 0 0 1 1 0 0 11 1 1195.6449 O95470 O95470 360 370 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.0022745 128.27 By MS/MS 6 0 1 1 2371000 2371000 0 5472 413 5651 13344 10953 10953 1 16299 0 GSSNSYAIK TIAECLADELINAAKGSSNSYAIKKKDELE LINAAKGSSNSYAIKKKDELERVAKSNR__ K G S I K K 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 3 0 0 1 0 0 0 9 0 925.45051 P46782 P46782 183 191 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.0029169 131.62 By matching By MS/MS 9.33 0.471 2 1 2 1 50352000 49998000 354120 5473 919 5652 13345;13346;13347 10954 10954 1 993170 807510 GSSSGGGYSSGSSSYGSGGR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS R G S G R Q 0 1 0 0 0 0 0 8 0 0 0 0 0 0 0 9 0 0 2 0 0 0 20 0 1739.6983 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 525 544 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 9.9271E-32 249.58 By MS/MS By MS/MS 4.64 2.94 4 3 5 2 2 2 1 2 2 2 9 16 292280000 106990000 185290000 + 5474 55 5653 13348;13349;13350;13351;13352;13353;13354;13355;13356;13357;13358;13359;13360;13361;13362;13363;13364;13365;13366;13367;13368;13369;13370;13371;13372 10955;10956;10957;10958;10959;10960;10961;10962;10963;10964;10965;10966;10967;10968;10969;10970;10971;10972;10973;10974;10975;10976;10977;10978;10979;10980;10981 10972 26 8215200 119930000 GSSSGGGYSSGSSSYGSGGRQSGSR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GSSSYGSGGRQSGSRGGSGGGGSISGGGYG R G S S R G 0 2 0 0 0 1 0 9 0 0 0 0 0 0 0 11 0 0 2 0 0 0 25 1 2254.9435 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 525 549 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0055921 65.765 By matching By MS/MS 4.5 2.58 1 2 1 1 2 1 1 1 3 7 2649200 408470 2240800 + 5475 55 5654 13373;13374;13375;13376;13377;13378;13379;13380;13381;13382 10982;10983;10984;10985;10986;10987;10988 10984 7 27618 2789500 GSSSGGVKSSGGSSSVK RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS SSGGVKSSGGSSSVKFVSTTYSGVTR____ R G S V K F 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 8 0 0 0 2 0 0 17 1 1453.7009 P04264 P04264 617 633 KRT1 Keratin, type II cytoskeletal 1 yes yes 2;3 3.6423E-11 193.11 By MS/MS By MS/MS 2.89 2.02 2 3 2 1 1 3 6 4180700 263180 3917500 5476 471 5655 13383;13384;13385;13386;13387;13388;13389;13390;13391 10989;10990;10991;10992;10993;10994;10995 10991 7 22037 5275400 GSSSGGVKSSGGSSSVR RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS SSGGVKSSGGSSSVRFVSTTYSGVTR____ R G S V R F 0 1 0 0 0 0 0 5 0 0 0 1 0 0 0 8 0 0 0 2 0 0 17 1 1481.707 CON__P04264 CON__P04264 617 633 yes yes 2;3 1.0343E-07 168 By matching By MS/MS 3.9 2.39 2 2 1 1 1 1 1 1 2 8 6863600 633900 6229700 + 5477 45 5656 13392;13393;13394;13395;13396;13397;13398;13399;13400;13401 10996;10997;10998;10999;11000 10997 5 8844.3 7829200 GSTAPVGGGAFPTIVER EQGINEFLRELSFGRGSTAPVGGGAFPTIV TAPVGGGAFPTIVEREPWDGRDGELPVEDD R G S E R E 2 1 0 0 0 0 1 4 0 1 0 0 0 1 2 1 2 0 0 2 0 0 17 0 1614.8366 Q15084 Q15084 393 409 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.00053854 155.98 By MS/MS 6 0 1 1 2298400 2298400 0 5478 1488 5657 13402 11001 11001 1 15800 0 GSTDNLMDDIER KHEKEDGAISTIVLRGSTDNLMDDIERAVD VLRGSTDNLMDDIERAVDDGVNTFKVLTRD R G S E R A 0 1 1 3 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1364.5878 P50990 P50990 379 390 CCT8 T-complex protein 1 subunit theta yes yes 2 3.436E-09 222.18 By MS/MS 6.83 1.34 1 2 1 1 1 6 35839000 35839000 0 5479 984 5658;5659 13403;13404;13405;13406;13407;13408 11002;11003;11004;11005 11002 535 4 263790 0 GSTLDLSDLEAEK VGWLLVRKHPAVKEKGSTLDLSDLEAEKLV EKGSTLDLSDLEAEKLVMFQRRYYKPGLLM K G S E K L 1 0 0 2 0 0 2 1 0 0 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1376.6671 O00767 O00767 197 209 SCD Acyl-CoA desaturase yes yes 2 6.3551E-13 247.79 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 11148000 11148000 0 5480 121 5660 13409;13410;13411;13412;13413;13414 11006;11007;11008;11009 11009 4 424470 0 GSTLEEVYGSVAK LIKIFQSSVFEAFLKGSTLEEVYGSVAKVA LKGSTLEEVYGSVAKVADYWLDVLYSKAAN K G S A K V 1 0 0 0 0 0 2 2 0 0 1 1 0 0 0 2 1 0 1 2 0 0 13 0 1338.6667 Q07864 Q07864 996 1008 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 5.3586E-08 219.03 By MS/MS 2 0 1 1 164640 164640 0 5481 1302 5661 13415 11010 11010 1 55687 0 GSTPYGGVKLEDLIVK GGMESMSNVPYVMNRGSTPYGGVKLEDLIV STPYGGVKLEDLIVKDGLTDVYNKIHMGSC R G S V K D 0 0 0 1 0 0 1 3 0 1 2 2 0 0 1 1 1 0 1 2 0 0 16 1 1674.9192 P24752 P24752 166 181 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0015181 135.04 By MS/MS 7 0 1 1 1337300 1337300 0 5482 716 5662 13416 11011 11011 1 20993 0 GSVAEAEDCYNTALR FPDAYCNLANALKEKGSVAEAEDCYNTALR GSVAEAEDCYNTALRLCPTHADSLNNLANI K G S L R L 3 1 1 1 1 0 2 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 15 0 1654.7257 O15294 O15294 307 321 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 6.2421E-24 282.05 By MS/MS 4 0 1 1 1315500 1315500 0 5483 179 5663 13417 11012 11012 1 123790 0 GSVGAVPSGTSPGGVATTAAAGSR GNGVHLRGAGGGREKGSVGAVPSGTSPGGV TSPGGVATTAAAGSRHSPAGSQALQTTAAS K G S S R H 5 1 0 0 0 0 0 6 0 0 0 0 0 0 2 4 3 0 0 3 0 0 24 0 2014.0079 Q6ZNB6 Q6ZNB6 40 63 NFXL1 NF-X1-type zinc finger protein NFXL1 yes yes 2 1.1711E-11 241.39 By MS/MS 5.67 1.7 1 1 1 3 2495200 2495200 0 5484 1741 5664 13418;13419;13420 11013;11014 11014 2 109480 0 GSYGDLGGPIITTQVTIPK PQGGSGYDYSYAGGRGSYGDLGGPIITTQV DLGGPIITTQVTIPKDLAGSIIGKGGQRIK R G S P K D 0 0 0 1 0 1 0 4 0 3 1 1 0 0 2 1 3 0 1 1 0 0 19 0 1916.0255 P61978 P61978 378 396 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 0.00010359 171.21 By MS/MS 5.5 0.5 1 1 2 3781400 3781400 0 5485 1135 5665 13421;13422 11015 11015 1 26542 0 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG GHGSYGSGSSSGGYRGGSGGGGGGSSGGRG R G S Y R G 0 1 0 0 0 0 0 20 1 0 0 0 0 0 0 12 0 0 5 0 0 0 39 0 3311.3008 CON__P04264;P04264 P04264 550 588 KRT1 Keratin, type II cytoskeletal 1 no no 3 6.1427E-32 166.61 By matching By MS/MS 3.67 1.6 1 2 1 1 1 3 3 10239000 5936700 4302600 + 5486 471;45 5666 13423;13424;13425;13426;13427;13428 11016;11017;11018;11019;11020;11021;11022;11023;11024 11020 9 148370 663960 GSYNDFSFVTHTNR YFDRDLHTNSPRHSKGSYNDFSFVTHTNRE KGSYNDFSFVTHTNREGVPMRKGEHLGEFN K G S N R E 0 1 2 1 0 0 0 1 1 0 0 0 0 2 0 2 2 0 1 1 0 0 14 0 1643.7328 Q9UG56 Q9UG56 347 360 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 5.7458E-11 241.31 By MS/MS 7.5 0.5 1 1 2 1107400 1107400 0 5487 2718 5667 13429;13430 11025 11025 1 15243 0 GTAAAAAAAAAAAAAGEGAR ______________________________ AAAAAAAAAAGEGARSPSPAAVSLGLGVAV M G T A R S 14 1 0 0 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 20 0 1569.7859 Q7RTP0 Q7RTP0 2 21 NIPA1 Magnesium transporter NIPA1 yes yes 2 3.5531E-05 122.93 By MS/MS 1 0 1 1 89210 89210 0 5488 1775 5668 13431 11026;11027 11026 2 21497 0 GTAAILEYLR DGNPFRVPRAAILMKGTAAILEYLRDRIPT AILMKGTAAILEYLRDRIPT__________ K G T L R D 2 1 0 0 0 0 1 1 0 1 2 0 0 0 0 0 1 0 1 0 0 0 10 0 1105.6132 Q9H9A6 Q9H9A6 588 597 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 1.0078E-05 174.41 By MS/MS 5 0 1 1 321690 321690 0 5489 2484 5669 13432 11028 11028 1 3226.4 0 GTALVLAR DSFLLSPEAAVGLLKGTALVLARLPLDKIT AAVGLLKGTALVLARLPLDKITECLSELCS K G T A R L 2 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 8 0 799.49159 Q9Y5L0 Q9Y5L0 564 571 TNPO3 Transportin-3 yes yes 2 0.018199 101.64 By MS/MS 4 0 1 1 680930 680930 0 5490 2915 5670 13433 11029 11029 1 64080 0 GTAVAICR RQAGIRVIMITGDNKGTAVAICRRIGIFGQ MITGDNKGTAVAICRRIGIFGQDEDVTSKA K G T C R R 2 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 846.43817 P16615;Q93084 P16615 629 636 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 0.0067988 117.16 By MS/MS 3 1.41 1 1 1 1 1 5 4223200 4223200 0 5491 635 5671 13434;13435;13436;13437;13438 11030;11031 11031 2 698920 0 GTAVVNGEFK SCHAPAVTQHAPYFKGTAVVNGEFKDLSLD APYFKGTAVVNGEFKDLSLDDFKGKYLVLF K G T F K D 1 0 1 0 0 0 1 2 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1020.524 P30048 P30048 74 83 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.0014336 115.23 By MS/MS 8.5 0.5 1 1 2 770570 770570 0 5492 764 5672 13439;13440 11032 11032 1 14060 0 GTAYTFFTPGNLK DYVHRIGRTARSTNKGTAYTFFTPGNLKQA NKGTAYTFFTPGNLKQARELIKVLEEANQA K G T L K Q 1 0 1 0 0 0 0 2 0 0 1 1 0 2 1 0 3 0 1 0 0 0 13 0 1415.7085 Q92841 Q92841 516 528 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 6.4019E-07 203.02 By MS/MS 5.5 0.5 1 1 2 1597100 1597100 0 5493 2073 5673 13441;13442 11033 11033 1 14707 0 GTAYVVYEDIFDAK GPIRQIRVGNTPETRGTAYVVYEDIFDAKN RGTAYVVYEDIFDAKNACDHLSGFNVCNRY R G T A K N 2 0 0 2 0 0 1 1 0 1 0 1 0 1 0 0 1 0 2 2 0 0 14 0 1589.7613 Q9Y3B4 Q9Y3B4 58 71 SF3B6 Splicing factor 3B subunit 6 yes yes 2 0.00021831 202.03 By MS/MS 10 0 1 1 160260 160260 0 5494 2864 5674 13443 11034;11035 11035 2 8637.6 0 GTCGIQYR IPQIGDKFASRHGQKGTCGIQYRQEDMPFT ASRHGQKGTCGIQYRQEDMPFTCEGITPDI K G T Y R Q 0 1 0 0 1 1 0 2 0 1 0 0 0 0 0 0 1 0 1 0 0 0 8 0 953.4389 P30876 P30876 943 950 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.0073118 114.78 By MS/MS 2.5 0.5 1 1 2 477590 477590 0 5495 781 5675 13444;13445 11036 11036 1 16703 0 GTCVEGTIPK ELCRVLLDNVENKMKGTCVEGTIPKLFRGK ENKMKGTCVEGTIPKLFRGKMVSYIQCKEV K G T P K L 0 0 0 0 1 0 1 2 0 1 0 1 0 0 1 0 2 0 0 1 0 0 10 0 1060.5223 Q93009 Q93009 313 322 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.042195 76.1 By MS/MS 3 0 1 1 142610 142610 0 5496 2086 5676 13446 11037 11037 1 2609.3 0 GTDIMYTGTLDCWR FDTVRRRMMMQSGRKGTDIMYTGTLDCWRK KGTDIMYTGTLDCWRKIARDEGGKAFFKGA K G T W R K 0 1 0 2 1 0 0 2 0 1 1 0 1 0 0 0 3 1 1 0 0 0 14 0 1687.7334 P05141 P05141 246 259 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 1.4022E-16 255.19 By MS/MS 5.67 3.3 1 2 3 2049800 2049800 0 5497 487 5677;5678 13447;13448;13449 11038;11039;11040 11038 189 3 58191 0 GTDIMYTGTLDCWRK FDTVRRRMMMQSGRKGTDIMYTGTLDCWRK GTDIMYTGTLDCWRKIARDEGGKAFFKGAW K G T R K I 0 1 0 2 1 0 0 2 0 1 1 1 1 0 0 0 3 1 1 0 0 0 15 1 1815.8284 P05141 P05141 246 260 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.0039785 115.29 By MS/MS 8 0 1 1 1271000 1271000 0 5498 487 5679 13450 11041 11041 189 1 16046 0 GTEDITSPHGIPLDLLDR PIVIFASNRGNCVIRGTEDITSPHGIPLDL DITSPHGIPLDLLDRVMIIRTMLYTPQEMK R G T D R V 0 1 0 3 0 0 1 2 1 2 3 0 0 0 2 1 2 0 0 0 0 0 18 0 1947.9902 Q9Y265 Q9Y265 340 357 RUVBL1 RuvB-like 1 yes yes 2;3 0.00056007 118.51 By MS/MS 6 0 2 2 7933600 7933600 0 5499 2815 5680 13451;13452 11042;11043 11042 1 54537 0 GTEEVFQALEDNQVALSTMK LDIVPYKDKGHHRLRGTEEVFQALEDNQVA FQALEDNQVALSTMKASRFVKAFEKDVDHW R G T M K A 2 0 1 1 0 2 3 1 0 0 2 1 1 1 0 1 2 0 0 2 0 0 20 0 2209.0573 Q9P225 Q9P225 1395 1414 DNAH2 Dynein heavy chain 2, axonemal yes yes 3 0.015879 70.335 By MS/MS By matching 7.14 1.81 2 1 1 1 1 1 6 1 1794500 1735000 59479 5500 2675 5681 13453;13454;13455;13456;13457;13458;13459 11044 11044 1 29942 49950 GTEITHAVVIK GGVPLVKEKPKMFAKGTEITHAVVIKKLNE MFAKGTEITHAVVIKKLNEILQARGKKGTD K G T I K K 1 0 0 0 0 0 1 1 1 2 0 1 0 0 0 0 2 0 0 2 0 0 11 0 1166.6659 Q99613;B5ME19 Q99613 321 331 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 5.7762E-05 155.58 By MS/MS By matching 4.43 1.76 1 3 1 1 1 6 1 40750000 40652000 98145 5501 2252 5682 13460;13461;13462;13463;13464;13465;13466 11045;11046;11047;11048;11049;11050;11051 11046 7 3081700 209120 GTEITHAVVIKK GGVPLVKEKPKMFAKGTEITHAVVIKKLNE FAKGTEITHAVVIKKLNEILQARGKKGTDR K G T K K L 1 0 0 0 0 0 1 1 1 2 0 2 0 0 0 0 2 0 0 2 0 0 12 1 1294.7609 Q99613;B5ME19 Q99613 321 332 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 7.6179E-12 223.36 By MS/MS 4.5 1.5 1 1 2 2 1 1 8 18778000 18778000 0 5502 2252 5683 13467;13468;13469;13470;13471;13472;13473;13474 11052;11053;11054;11055 11054 4 1471600 0 GTEQELIGLLQAR LYENKQFEKIAEELKGTEQELIGLLQAREK LKGTEQELIGLLQAREKEVHDLEIQLTAIT K G T A R E 1 1 0 0 0 2 2 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1426.778 Q15431 Q15431 462 474 SYCP1 Synaptonemal complex protein 1 yes yes 2 0.0055487 101.97 By MS/MS By MS/MS 5.25 0.829 1 1 2 3 1 5615300 5454300 161000 5503 1512 5684 13475;13476;13477;13478 11056;11057 11057 2 434020 164980 GTEVQVDDIKR IQLITAASLVCRKRKGTEVQVDDIKRVYSL RKRKGTEVQVDDIKRVYSLFLDESRSTQYM K G T K R V 0 1 0 2 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 1 1258.6517 Q9Y230 Q9Y230 418 428 RUVBL2 RuvB-like 2 yes yes 2;3 0.00067366 143.4 By MS/MS By matching 6.25 0.433 3 1 3 1 14511000 14482000 29268 5504 2810 5685 13479;13480;13481;13482 11058;11059 11058 2 100880 29991 GTFDNAETK LNKWQALLVQIRKARGTFDNAETKKEFGPV QIRKARGTFDNAETKKEFGPVVIDYGKVQS R G T T K K 1 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 9 0 981.44034 Q14204 Q14204 1091 1099 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.002505 114.89 By MS/MS 1.5 0.5 1 1 2 507070 507070 0 5505 1433 5686 13483;13484 11060 11060 1 158460 0 GTFDNAETKK LNKWQALLVQIRKARGTFDNAETKKEFGPV IRKARGTFDNAETKKEFGPVVIDYGKVQSK R G T K K E 1 0 1 1 0 0 1 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 10 1 1109.5353 Q14204 Q14204 1091 1100 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0001157 158.87 By MS/MS 1.5 0.5 1 1 2 735030 735030 0 5506 1433 5687 13485;13486 11061;11062 11062 2 216170 0 GTGARPYTGK YDTDLFVPYFEAIQKGTGARPYTGKVGAED EAIQKGTGARPYTGKVGAEDADGIDMAYRV K G T G K V 1 1 0 0 0 0 0 3 0 0 0 1 0 0 1 0 2 0 1 0 0 0 10 1 1006.5196 P49588 P49588 273 282 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.021865 106.88 By MS/MS 5 0.816 1 1 1 3 1105300 1105300 0 5507 951 5688 13487;13488;13489 11063 11063 1 72093 0 GTGEAEEEYVGPR GNAVRAGVREKRRGRGTGEAEEEYVGPRLS GRGTGEAEEEYVGPRLSRRILQQARQQQEE R G T P R L 1 1 0 0 0 0 4 3 0 0 0 0 0 0 1 0 1 0 1 1 0 0 13 0 1392.6157 Q13895 Q13895 41 53 BYSL Bystin yes yes 2 0.00068572 144.55 By MS/MS 6 0 1 1 4285300 4285300 0 5508 1413 5689 13490 11064 11064 1 29458 0 GTGGVDTAATGGVFDISNLDR SRFPKILENLRLQKRGTGGVDTAATGGVFD TAATGGVFDISNLDRLGKSEVELVQLVIDG R G T D R L 2 1 1 3 0 0 0 5 0 1 1 0 0 1 0 1 3 0 0 2 0 0 21 0 2021.9654 P12532 P12532 354 374 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 1.4188E-59 341.85 By MS/MS 7 0.816 1 1 1 3 2491000 2491000 0 5509 593 5690 13491;13492;13493 11065 11065 1 34514 0 GTGGVDTAAVGGVFDVSNADR EKFSEVLKRLRLQKRGTGGVDTAAVGGVFD TAAVGGVFDVSNADRLGFSEVELVQMVVDG R G T D R L 3 1 1 3 0 0 0 5 0 0 0 0 0 1 0 1 2 0 0 4 0 0 21 0 1963.9235 P12277 P12277 321 341 CKB Creatine kinase B-type yes yes 2 0.022485 72.662 By MS/MS 7 0 1 1 2537700 2537700 0 5510 592 5691 13494 11066 11066 0 39837 0 GTGIAAQTAGIAAAAR AFASCGTEGFRNAKKGTGIAAQTAGIAAAA TGIAAQTAGIAAAARAKQKGVIHIRVVVKG K G T A R A 7 1 0 0 0 1 0 3 0 2 0 0 0 0 0 0 2 0 0 0 0 0 16 0 1398.7579 P82912 P82912 123 138 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2 1.5762E-16 253.42 By MS/MS 9 0 1 1 1782400 1782400 0 5511 1234 5692 13495 11067 11067 1 35078 0 GTGIVSAPVPK GRCGSVLVRLIPAPRGTGIVSAPVPKKLLM PAPRGTGIVSAPVPKKLLMMAGIDDCYTSA R G T P K K 1 0 0 0 0 0 0 2 0 1 0 1 0 0 2 1 1 0 0 2 0 0 11 0 1024.5917 P15880 P15880 201 211 RPS2 40S ribosomal protein S2 yes yes 2 0.00079306 125.71 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 75997000 75686000 311480 5512 627 5693 13496;13497;13498;13499;13500 11068;11069;11070;11071;11072 11071 5 1001000 420330 GTGLLSSDYR SLGSLQTPEAVTTRKGTGLLSSDYRIINGK VTTRKGTGLLSSDYRIINGKSGTQDIQPGP K G T Y R I 0 1 0 1 0 0 0 2 0 0 2 0 0 0 0 2 1 0 1 0 0 0 10 0 1067.5247 Q7Z2W4 Q7Z2W4 402 411 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.013643 89.886 By MS/MS 4 0 1 1 1211800 1211800 0 5513 1778 5694 13501 11073 11073 1 114040 0 GTGQSDDSDIWDDTALIK GGGVPEQEDSVLFRRGTGQSDDSDIWDDTA QSDDSDIWDDTALIKAYDKAVASFKHALKN R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 Q16637 Q16637 24 41 SMN1 Survival motor neuron protein yes yes 2 2.3011E-07 163.62 By MS/MS 7 0 1 1 0 0 0 5514 1555 5695 13502 11074 11074 1 0 0 GTGRIPDQLVILDMK TTEDYDMFEVCFESKGTGRIPDQLVILDMK GTGRIPDQLVILDMKHGVEAKNYEEIAKVE K G T M K H 0 1 0 2 0 1 0 2 0 2 2 1 1 0 1 0 1 0 0 1 0 0 15 1 1654.9076 P49755 P49755 113 127 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 3 0.0061485 95.822 By MS/MS 9 0 1 1 383200 383200 0 5515 961 5696 13503 11075 11075 528 1 7541.5 0 GTGVVTSVPSDSPDDIAALR KVIYVLPMLTIKEDKGTGVVTSVPSDSPDD TSVPSDSPDDIAALRDLKKKQALRAKYGIR K G T L R D 2 1 0 3 0 0 0 2 0 1 1 0 0 0 2 3 2 0 0 3 0 0 20 0 1955.98 Q9P2J5 Q9P2J5 385 404 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 2.9453E-08 206.46 By MS/MS 3.5 0.5 1 1 2 2661600 2661600 0 5516 2684 5697 13504;13505 11076;11077 11076 2 175560 0 GTIQVITQGTSLK EALGTLMRAWAGSPKGTIQVITQGTSLKNA PKGTIQVITQGTSLKNAGNCLSPAVIVGLL K G T L K N 0 0 0 0 0 2 0 2 0 2 1 1 0 0 0 1 3 0 0 1 0 0 13 0 1344.7613 O43175 O43175 352 364 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 7.6142E-25 289.71 By MS/MS 7 1.41 1 1 1 1 1 5 32028000 32028000 0 5517 195 5698 13506;13507;13508;13509;13510 11078;11079;11080;11081 11078 4 255250 0 GTLAYLPEEYIK SPSQSSMVARTQTVRGTLAYLPEEYIKTGR TVRGTLAYLPEEYIKTGRLAVDTDTFSFGV R G T I K T 1 0 0 0 0 0 2 1 0 1 2 1 0 0 1 0 1 0 2 0 0 0 12 0 1395.7286 P51617 P51617 386 397 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 0.00047994 134.84 By MS/MS 5 0 1 1 1751400 1751400 0 5518 1001 5699 13511 11082 11082 1 17565 0 GTLDPVEK ITRARFEELNADLFRGTLDPVEKALRDAKL LNADLFRGTLDPVEKALRDAKLDKSQIHDI R G T E K A 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 8 0 857.44945 P11142 P11142 312 319 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.042391 97.798 By matching By MS/MS 5.33 0.471 2 1 2 1 31764000 31482000 282190 5519 572 5700 13512;13513;13514 11083 11083 1 309130 236980 GTLPAVEPFQR THPSESKINLRIQTRGTLPAVEPFQRGLNE IQTRGTLPAVEPFQRGLNELMNVCQHVLDK R G T Q R G 1 1 0 0 0 1 1 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 11 0 1213.6455 P0DPB6 P0DPB6 88 98 yes yes 2 0.00026942 137.05 By MS/MS 10 0 1 1 1138400 1138400 0 5520 555 5701 13515 11084 11084 1 61358 0 GTLTLCPYHSDR LFMVRLAQGLTHLGKGTLTLCPYHSDRQLM LGKGTLTLCPYHSDRQLMSQVAVAGLLTVL K G T D R Q 0 1 0 1 1 0 0 1 1 0 2 0 0 0 1 1 2 0 1 0 0 0 12 0 1418.6612 Q13200 Q13200 774 785 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0014378 117.01 By MS/MS 4 0 1 1 1493100 1493100 0 5521 1365 5702 13516 11085 11085 1 140510 0 GTLVGDILR GKSTAFQLVELGPGRGTLVGDILRVFTQLG ELGPGRGTLVGDILRVFTQLGSVLKNCDIS R G T L R V 0 1 0 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 942.54983 Q7L592 Q7L592 128 136 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.016146 90.601 By MS/MS 7 0 1 1 147190 147190 0 5522 1764 5703 13517 11086 11086 1 2310.7 0 GTMIPSEAPLLHR LNTHYRYIGKTMDYRGTMIPSEAPLLHRQV YRGTMIPSEAPLLHRQVKLVDPMDRKPTEI R G T H R Q 1 1 0 0 0 0 1 1 1 1 2 0 1 0 2 1 1 0 0 0 0 0 13 0 1420.7497 Q96A35 Q96A35 106 118 MRPL24 39S ribosomal protein L24, mitochondrial yes yes 3 0.0063972 92.247 By MS/MS 8.5 0.5 1 1 2 1108100 1108100 0 5523 2102 5704 13518;13519 11087 11087 1010 1 15624 0 GTNDMKQQHVIETLIGK VKEMNPALGIDCLHKGTNDMKQQHVIETLI NDMKQQHVIETLIGKKQQISLATQMVRMIL K G T G K K 0 0 1 1 0 2 1 2 1 2 1 2 1 0 0 0 2 0 0 1 0 0 17 1 1910.9884 P48643 P48643 497 513 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.0093964 85.473 By MS/MS 6 0 1 1 1903000 1903000 0 5524 940 5705 13520 11088 11088 1 13082 0 GTNIQENEYVK EAIDFDSQACQLRVKGTNIQENEYVKMGAY LRVKGTNIQENEYVKMGAYHTIELEPNRQF K G T V K M 0 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 11 0 1293.6201 Q9BRX2 Q9BRX2 85 95 PELO Protein pelota homolog yes yes 2 5.3148E-05 169.93 By MS/MS 7 0 1 1 1565400 1565400 0 5525 2301 5706 13521 11089 11089 1 24574 0 GTNVNQLNYR GKCRVPAWCDRILWRGTNVNQLNYRSHMEL RILWRGTNVNQLNYRSHMELKTSDHKPVSA R G T Y R S 0 1 3 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1177.584 Q01968 Q01968 505 514 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.00061278 131.11 By MS/MS 4 0 1 1 1310100 1310100 0 5526 1273 5707 13522 11090 11090 1 123290 0 GTNYLADVFEK MKENFPNFLSACDKKGTNYLADVFEKKDKN CDKKGTNYLADVFEKKDKNEDKKIDFSEFL K G T E K K 1 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 1 0 0 11 0 1255.6085 P31151 P31151 51 61 S100A7 Protein S100-A7 yes yes 2 1.6052E-18 256.48 By MS/MS By MS/MS 5.38 3.57 2 1 1 1 1 2 4 4 1097000 657830 439150 5527 784 5708 13523;13524;13525;13526;13527;13528;13529;13530 11091;11092;11093;11094;11095;11096;11097;11098 11098 8 35085 497940 GTPLDTEVPMER MTSQPSMGALVACTRGTPLDTEVPMERVFD CTRGTPLDTEVPMERVFDYSEYWEGARGLY R G T E R V 0 1 0 1 0 0 2 1 0 0 1 0 1 0 2 0 2 0 0 1 0 0 12 0 1343.6391 P11498 P11498 819 830 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.002067 112.13 By MS/MS 3 0 2 2 733580 733580 0 5528 580 5709;5710 13531;13532 11099;11100 11099 270 1 13423 0 GTPLISPLIK NPNALFPPVEFPAPRGTPLISPLIKWDHSL FPAPRGTPLISPLIKWDHSLAWDVPAAEDF R G T I K W 0 0 0 0 0 0 0 1 0 2 2 1 0 0 2 1 1 0 0 0 0 0 10 0 1037.6485 P49327 P49327 826 835 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.053137 70.816 By MS/MS 3 0.816 1 1 1 3 24697000 24697000 0 5529 946 5711 13533;13534;13535 11101 11101 1 5426900 0 GTQGATAGASSELDASK YRGRKKGKKKDQIGKGTQGATAGASSELDA QGATAGASSELDASKTVSSPPTSPRPGSAA K G T S K T 4 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 2 0 0 0 0 0 17 0 1549.722 O76094 O76094 601 617 SRP72 Signal recognition particle subunit SRP72 yes yes 2 1.4578E-44 330.04 By MS/MS By MS/MS 7.17 1.95 2 1 1 1 1 5 1 10591000 10530000 60767 5530 362 5712 13536;13537;13538;13539;13540;13541 11102;11103;11104;11105 11103 4 119730 51031 GTQGVVTNFEIFR KNGDYLCVKVDRTPKGTQGVVTNFEIFRMR PKGTQGVVTNFEIFRMREKQVPVDVVEMKE K G T F R M 0 1 1 0 0 1 1 2 0 1 0 0 0 2 0 0 2 0 0 2 0 0 13 0 1466.7518 P55884 P55884 536 548 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 5.688E-12 276.35 By MS/MS 4.45 1.97 1 1 1 3 2 1 1 1 11 41429000 41429000 0 5531 1065 5713 13542;13543;13544;13545;13546;13547;13548;13549;13550;13551;13552 11106;11107;11108;11109;11110;11111;11112;11113;11114;11115;11116;11117;11118;11119;11120 11111 15 2671300 0 GTQSLPTASASK LLEGAVAFMPEDITKGTQSLPTASASKFPS ITKGTQSLPTASASKFPSSGPVTPQPTALT K G T S K F 2 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 2 0 0 0 0 0 12 0 1146.5881 Q9Y679 Q9Y679 348 359 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.00038768 138.25 By MS/MS By matching 7.33 0.471 2 1 2 1 5706400 5689600 16829 5532 2934 5714 13553;13554;13555 11121 11121 1 88946 30308 GTRDDEYDYLFK ______________________________ ______________________________ M G T F K V 0 1 0 3 0 0 1 1 0 0 1 1 0 1 0 0 1 0 2 0 0 0 12 1 1520.6783 P62491;Q15907 P62491 2 13 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0014203 116.54 By MS/MS 8.5 0.5 1 1 2 4120600 4120600 0 5533 1161 5715 13556;13557 11122;11123;11124 11123 3 67668 0 GTSFDAAATSGGSASSEK CTVKCDEKVKVFSVRGTSFDAAATSGGSAS FDAAATSGGSASSEKASSTSPVEISEWLDQ R G T E K A 4 0 0 1 0 0 1 3 0 0 0 1 0 1 0 5 2 0 0 0 0 0 18 0 1629.7118 P13804 P13804 170 187 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 2.2831E-25 291.75 By MS/MS 8 0 1 1 2604900 2604900 0 5534 606 5716 13558 11125 11125 1 32886 0 GTSFFPTAGGFR STIPSYQPCNRQTGRGTSFFPTAGGFRSPS TGRGTSFFPTAGGFRSPSPGLFRASLVSSA R G T F R S 1 1 0 0 0 0 0 3 0 0 0 0 0 3 1 1 2 0 0 0 0 0 12 0 1243.5986 Q9HAW4 Q9HAW4 796 807 CLSPN Claspin yes yes 2 0.0070545 97.565 By MS/MS 2 0 1 1 83655 83655 0 5535 2497 5717 13559 11126 11126 1 28295 0 GTSSHLPPPPK AKVPYGKGPSFNQERGTSSHLPPPPKLLAQ NQERGTSSHLPPPPKLLAQQHPPPDRQAVP R G T P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 0 4 2 1 0 0 0 0 0 11 0 1116.5928 Q9Y520 Q9Y520 401 411 PRRC2C Protein PRRC2C yes yes 2 0.0067538 93.649 By MS/MS 1.5 0.5 1 1 2 361790 361790 0 5536 2905 5718 13560;13561 11127;11128 11127 2 111520 0 GTSSLSQQTPR ASNSAPHLGFHLGSKGTSSLSQQTPRFNPI LGSKGTSSLSQQTPRFNPIMVTLAPNIQTG K G T P R F 0 1 0 0 0 2 0 1 0 0 1 0 0 0 1 3 2 0 0 0 0 0 11 0 1160.5786 Q9NYJ8 Q9NYJ8 163 173 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 1.9144E-05 164.66 By MS/MS By matching 5 0 2 1 1 675930 646780 29145 5537 2634 5719 13562;13563 11129 11129 1 6486.9 24475 GTSYQSPHGIPIDLLDR PVLIMATNRGITRIRGTSYQSPHGIPIDLL SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK R G T D R L 0 1 0 2 0 1 0 2 1 2 2 0 0 0 2 2 1 0 1 0 0 0 17 0 1867.9428 Q9Y230 Q9Y230 337 353 RUVBL2 RuvB-like 2 yes yes 2 0.00053229 127.3 By MS/MS 6 0 1 1 1762600 1762600 0 5538 2810 5720 13564 11130 11130 1 12117 0 GTTAVLTEK PNKKGTRLGRYRCEKGTTAVLTEKITPLEI RYRCEKGTTAVLTEKITPLEIEVLEETVQT K G T E K I 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 1 0 0 9 0 918.50221 Q99436 Q99436 250 258 PSMB7 Proteasome subunit beta type-7 yes yes 2 0.021746 88.177 By MS/MS 9 0.816 1 1 1 3 3116700 3116700 0 5539 2243 5721 13565;13566;13567 11131;11132 11132 2 53533 0 GTTEEVCR VCAIIERVQRYLEEKGTTEEVCRIYLLRIL QRYLEEKGTTEEVCRIYLLRILHTYYKFDY K G T C R I 0 1 0 0 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 950.41274 Q99613;B5ME19 Q99613 494 501 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.018523 101.28 By MS/MS 3.5 1.12 1 1 1 1 4 3849100 3849100 0 5540 2252 5722 13568;13569;13570;13571 11133 11133 1 431650 0 GTVEGFEPADNK TLKKYDGRTKPIPKKGTVEGFEPADNKCLL PKKGTVEGFEPADNKCLLRATDGKKKISTV K G T N K C 1 0 1 1 0 0 2 2 0 0 0 1 0 1 1 0 1 0 0 1 0 0 12 0 1262.5779 P37108 P37108 44 55 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.00028767 144.77 By MS/MS 10 0 1 1 225560 225560 0 5541 844 5723 13572 11134 11134 1 12157 0 GTVGFSGAELENLVNQAALK KIKFDQSVDPEIIARGTVGFSGAELENLVN SGAELENLVNQAALKAAVDGKEMVTMKELE R G T L K A 3 0 2 0 0 1 2 3 0 0 3 1 0 1 0 1 1 0 0 2 0 0 20 0 2017.048 Q96TA2 Q96TA2 537 556 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 1.6466E-59 376.77 By MS/MS 6 0 1 1 301810 301810 0 5542 2241 5724 13573 11135 11135 1 2074.7 0 GTVLTLMR AKKLYQEFGIRGIYKGTVLTLMRDVPASGM GIRGIYKGTVLTLMRDVPASGMYFMTYEWL K G T M R D 0 1 0 0 0 0 0 1 0 0 2 0 1 0 0 0 2 0 0 1 0 0 8 0 889.50552 O43772 O43772 171 178 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.043599 84.916 By MS/MS 8 0 1 1 362400 362400 0 5543 234 5725 13574 11136 11136 1 4575.3 0 GTVVAQGGGR LSRVFLALVEEVEDRGTVVAQGGGRALIPL EVEDRGTVVAQGGGRALIPLALEGTDVGQT R G T G R A 1 1 0 0 0 1 0 4 0 0 0 0 0 0 0 0 1 0 0 2 0 0 10 0 900.47773 Q9H3U1 Q9H3U1 682 691 UNC45A Protein unc-45 homolog A yes yes 2 0.0002553 143.37 By MS/MS 4.5 1.12 1 1 1 1 4 1849100 1849100 0 5544 2442 5726 13575;13576;13577;13578 11137 11137 1 85073 0 GTVVTGTLER PFLLPVEAVYSVPGRGTVVTGTLERGILKK SVPGRGTVVTGTLERGILKKGDECELLGHS R G T E R G 0 1 0 0 0 0 1 2 0 0 1 0 0 0 0 0 3 0 0 2 0 0 10 0 1031.5611 P49411 P49411 272 281 TUFM Elongation factor Tu, mitochondrial yes yes 2 7.6216E-06 173.39 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 73905000 72953000 952180 5545 949 5727 13579;13580;13581;13582;13583;13584 11138;11139;11140;11141 11138 3 1121900 1663800 GTYLATFHQR ERARWTETYVRWSPKGTYLATFHQRGIALW RWSPKGTYLATFHQRGIALWGGEKFKQIQR K G T Q R G 1 1 0 0 0 1 0 1 1 0 1 0 0 1 0 0 2 0 1 0 0 0 10 0 1192.5989 P55884 P55884 346 355 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 1.0705E-08 190.73 By MS/MS 3.82 1.75 1 2 2 2 2 1 1 11 73013000 73013000 0 5546 1065 5728 13585;13586;13587;13588;13589;13590;13591;13592;13593;13594;13595 11142;11143;11144;11145;11146;11147;11148;11149 11145 8 5283400 0 GTYQGLTATVLK FFHGVREIVREQGLKGTYQGLTATVLKQGS GLKGTYQGLTATVLKQGSNQAIRFFVMTSL K G T L K Q 1 0 0 0 0 1 0 2 0 0 2 1 0 0 0 0 3 0 1 1 0 0 12 0 1250.6871 P53007 P53007 179 190 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 3.4755E-06 192.5 By MS/MS 8.5 0.5 1 1 2 24994000 24994000 0 5547 1026 5729 13596;13597 11150;11151 11151 2 319920 0 GVAASAGSSGENKK KGTSISTKPPLTKDRGVAASAGSSGENKKA RGVAASAGSSGENKKAKPVPWVEKYRPKCV R G V K K A 3 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 0 0 0 1 0 0 14 1 1261.6262 P35249 P35249 21 34 RFC4 Replication factor C subunit 4 yes yes 2 0.0001201 192.44 By MS/MS 7 0 1 1 584750 584750 0 5548 816 5730 13598 11152 11152 1 9179.5 0 GVAINMVTEEDK NYIHRIGRGGRFGRKGVAINMVTEEDKRTL GRKGVAINMVTEEDKRTLRDIETFYNTSIE K G V D K R 1 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 12 0 1304.6282 P60842 P60842 370 381 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 0.00045454 152.69 By MS/MS 1 0 1 1 0 0 0 5549 1097 5731 13599 11153 11153 1 0 0 GVAINMVTEEDKR NYIHRIGRGGRFGRKGVAINMVTEEDKRTL RKGVAINMVTEEDKRTLRDIETFYNTSIEE K G V K R T 1 1 1 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 13 1 1460.7293 P60842 P60842 370 382 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 4.3139E-05 194.48 By MS/MS 6.65 2.55 2 1 1 2 2 6 4 4 5 4 31 536070000 536070000 0 5550 1097 5732;5733 13600;13601;13602;13603;13604;13605;13606;13607;13608;13609;13610;13611;13612;13613;13614;13615;13616;13617;13618;13619;13620;13621;13622;13623;13624;13625;13626;13627;13628;13629;13630 11154;11155;11156;11157;11158;11159;11160;11161;11162;11163;11164;11165;11166;11167;11168;11169;11170;11171;11172 11162 624 17 5638200 0 GVATNWLR AVVVEYETKAGRINKGVATNWLRAKEPAGE KAGRINKGVATNWLRAKEPAGENGGRALVP K G V L R A 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 8 0 915.49265 P16435 P16435 488 495 POR NADPH--cytochrome P450 reductase yes yes 2 0.041116 75.043 By MS/MS 5 0 1 1 772190 772190 0 5551 634 5734 13631 11173 11173 1 7744.6 0 GVAYDVPNPVFLEQK AEDVYSRLTTPVFGKGVAYDVPNPVFLEQK GVAYDVPNPVFLEQKKMLKSGLNIAHFKQH K G V Q K K 1 0 1 1 0 1 1 1 0 0 1 1 0 1 2 0 0 0 1 3 0 0 15 0 1674.8617 Q16850 Q16850 142 156 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 0.00058842 156 By MS/MS 6 0 1 1 3052000 3052000 0 5552 1561 5735 13632 11174 11174 1 20980 0 GVAYTLLTPK THTHRIGRTGRAGEKGVAYTLLTPKDSNFA RAGEKGVAYTLLTPKDSNFAGDLVRNLEGA K G V P K D 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 2 0 1 1 0 0 10 0 1061.6121 Q86XP3 Q86XP3 596 605 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.025393 84.213 By MS/MS 3 0 1 1 90281 90281 0 5553 1846 5736 13633 11175 11175 1 1651.9 0 GVCLIDEFDK REWTLEAGALVLADRGVCLIDEFDKMNDQD VLADRGVCLIDEFDKMNDQDRTSIHEAMEQ R G V D K M 0 0 0 2 1 0 1 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1194.5591 P49736 P49736 582 591 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0011809 120.12 By MS/MS 3 0 1 1 86270 86270 0 5554 958 5737 13634 11176;11177 11176 2 1578.5 0 GVCSCVEAGK HHDRKNGRSSSGALRGVCSCVEAGKACDPA SGALRGVCSCVEAGKACDPAARQFNTLIPW R G V G K A 1 0 0 0 2 0 1 2 0 0 0 1 0 0 0 1 0 0 0 2 0 0 10 0 1065.4583 P26358 P26358 1474 1483 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.045582 74.464 By MS/MS 2 0 1 1 262130 262130 0 5555 730 5738 13635 11178 11178 1 88664 0 GVCTEAGMYALR KIAELMPGASGAEVKGVCTEAGMYALRERR EVKGVCTEAGMYALRERRVHVTQEDFEMAV K G V L R E 2 1 0 0 1 0 1 2 0 0 1 0 1 0 0 0 1 0 1 1 0 0 12 0 1326.606 P62195 P62195 361 372 PSMC5 26S protease regulatory subunit 8 yes yes 2 3.3575E-05 172.59 By MS/MS 7 0 1 1 1312200 1312200 0 5556 1142 5739 13636 11179 11179 1 20599 0 GVDEVTIVNILTNR AERDALNIETAIKTKGVDEVTIVNILTNRS KGVDEVTIVNILTNRSNAQRQDIAFAYQRR K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 P07355 P07355 50 63 ANXA2 Annexin A2 yes yes 2 2.1395E-11 241.31 By MS/MS By MS/MS 6 1.91 1 1 1 1 2 5 1 609480 537120 72360 5557 508 5740 13637;13638;13639;13640;13641;13642 11180;11181;11182;11183;11184;11185 11183 6 11140 9210.4 GVDLQENNPASR KNEPQNATGAPGRNRGVDLQENNPASRSQC RNRGVDLQENNPASRSQCCSN_________ R G V S R S 1 1 2 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 12 0 1298.6215 P51148 P51148 199 210 RAB5C Ras-related protein Rab-5C yes yes 2 2.029E-10 214.67 By MS/MS 9 0.816 1 1 1 3 3405000 3405000 0 5558 989 5741 13643;13644;13645 11186;11187 11186 2 57689 0 GVDLTEPTQPTR KNEPQNPGANSARGRGVDLTEPTQPTRNQC RGRGVDLTEPTQPTRNQCCSN_________ R G V T R N 0 1 0 1 0 1 1 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1312.6623 P20339 P20339 198 209 RAB5A Ras-related protein Rab-5A yes yes 2 4.0351E-05 170.47 By MS/MS 8.5 0.5 1 1 2 744230 744230 0 5559 669 5742 13646;13647 11188;11189;11190 11190 3 11600 0 GVDLVLNSLAEEK DTSFEQHVLWHTGGKGVDLVLNSLAEEKLQ GKGVDLVLNSLAEEKLQASVRCLATHGRFL K G V E K L 1 0 1 1 0 0 2 1 0 0 3 1 0 0 0 1 0 0 0 2 0 0 13 0 1385.7402 P49327 P49327 1740 1752 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.6251E-24 276.17 By MS/MS 3 1.41 1 1 1 1 1 5 11747000 11747000 0 5560 946 5743 13648;13649;13650;13651;13652 11191;11192;11193;11194;11195;11196 11192 6 2508700 0 GVDLYLR KFFFDILSVVDLNPRGVDLYLRILMAIDSE SVVDLNPRGVDLYLRILMAIDSELVDRDVV R G V L R I 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 1 1 0 0 7 0 834.45995 O43592 O43592 138 144 XPOT Exportin-T yes yes 2 0.040164 97.071 By MS/MS 4 0 1 1 1611700 1611700 0 5561 220 5744 13653 11197 11197 1 151670 0 GVDYNAEIPFEK RAAGIEIQKKRKRKRGVDYNAEIPFEKKPA RKRGVDYNAEIPFEKKPALGFYDTSEENYQ R G V E K K 1 0 1 1 0 0 2 1 0 1 0 1 0 1 1 0 0 0 1 1 0 0 12 0 1380.6561 Q99459 Q99459 207 218 CDC5L Cell division cycle 5-like protein yes yes 2 0.001396 117.79 By MS/MS 4 0 1 1 1519600 1519600 0 5562 2245 5745 13654 11198 11198 1 143000 0 GVEAVGSYAENQR IMSYQIWVDYINFLKGVEAVGSYAENQRIT LKGVEAVGSYAENQRITAVRRVYQRGCVNP K G V Q R I 2 1 1 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 1 2 0 0 13 0 1378.6477 Q12996 Q12996 152 164 CSTF3 Cleavage stimulation factor subunit 3 yes yes 2 8.6684E-08 214.82 By MS/MS 5 0 1 1 658610 658610 0 5563 1344 5746 13655 11199 11199 1 6605.5 0 GVEEEEEDGEMRE LGEVLIRCNNVLYIRGVEEEEEDGEMRE__ IRGVEEEEEDGEMRE_______________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 2.6495E-16 249.83 By MS/MS 10 0 3 3 1319700 1319700 0 5564 1154 5747;5748 13656;13657;13658 11200;11201;11202;11203 11203 658 4 71128 0 GVEGLIDIENPNR DESEDEEDDYQQKRKGVEGLIDIENPNRVA RKGVEGLIDIENPNRVAQTTKKVTQLDLDG K G V N R V 0 1 2 1 0 0 2 2 0 2 1 0 0 0 1 0 0 0 0 1 0 0 13 0 1424.726 Q13442 Q13442 76 88 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.0033963 108.37 By MS/MS 8.5 0.5 1 1 2 4298300 4298300 0 5565 1386 5749 13659;13660 11204;11205 11204 2 55444 0 GVEGLIDIENPNRVAQTTK DESEDEEDDYQQKRKGVEGLIDIENPNRVA LIDIENPNRVAQTTKKVTQLDLDGPKELSR K G V T K K 1 1 2 1 0 1 2 2 0 2 1 1 0 0 1 0 2 0 0 2 0 0 19 1 2053.0804 Q13442 Q13442 76 94 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.012541 74.147 By MS/MS 8 0 1 1 1245400 1245400 0 5566 1386 5750 13661 11206 11206 1 15724 0 GVEQNHQR QAQVGLGQLHLHGGRGVEQNHQRAFDYFNL LHLHGGRGVEQNHQRAFDYFNLAANAGNSH R G V Q R A 0 1 1 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 966.46314 Q9UBV2 Q9UBV2 389 396 SEL1L Protein sel-1 homolog 1 yes yes 2 0.030906 89.752 By MS/MS 4 0 1 1 116370 116370 0 5567 2706 5751 13662 11207 11207 1 10951 0 GVETIANDVVSLATK PAGLITPIVFNAHIKGVETIANDVVSLATK GVETIANDVVSLATKAREGKLQPHEFQGGT K G V T K A 2 0 1 1 0 0 1 1 0 1 1 1 0 0 0 1 2 0 0 3 0 0 15 0 1515.8144 P10515 P10515 533 547 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 1.9529E-43 319.37 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 1980600 1768500 212070 5568 561 5752 13663;13664;13665 11208;11209;11210 11209 3 16379 178090 GVFNVQMEPK SQAMAVIKEKIEEKRGVFNVQMEPKVVTDT IEEKRGVFNVQMEPKVVTDTDETELARQME R G V P K V 0 0 1 0 0 1 1 1 0 0 0 1 1 1 1 0 0 0 0 2 0 0 10 0 1147.5696 P05198 P05198 267 276 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 4.88E-06 177.7 By MS/MS 7 0 1 1 1019200 1019200 0 5569 489 5753 13666 11211 11211 192 1 15999 0 GVFVQSVLPYFVATK VDFFSQCLHEEYRSKGVFVQSVLPYFVATK GVFVQSVLPYFVATKLAKIRKPTLDKPSPE K G V T K L 1 0 0 0 0 1 0 1 0 0 1 1 0 2 1 1 1 0 1 4 0 0 15 0 1653.913 Q53GQ0 Q53GQ0 224 238 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.0015786 113.24 By MS/MS 8 0 1 1 45005 45005 0 5570 1587 5754 13667 11212;11213 11213 2 568.18 0 GVGAEPLLPWNR WRGPPPLFQQQRFDRGVGAEPLLPWNRMLQ FDRGVGAEPLLPWNRMLQTQNAAFQPNQYQ R G V N R M 1 1 1 0 0 0 1 2 0 0 2 0 0 0 2 0 0 1 0 1 0 0 12 0 1307.6986 Q9H0D6 Q9H0D6 884 895 XRN2 5-3 exoribonuclease 2 yes yes 2 0.012877 89.029 By MS/MS 4 0 1 1 217520 217520 0 5571 2407 5755 13668 11214 11214 1 20470 0 GVGAIYIR IDLMSISGHKIYGPKGVGAIYIRRRPRVRV HKIYGPKGVGAIYIRRRPRVRVEALQSGGG K G V I R R 1 1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 1 1 0 0 8 0 847.49159 Q9Y697 Q9Y697 264 271 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 0.01359 106.76 By MS/MS 7 0 1 1 577010 577010 0 5572 2935 5756 13669 11215 11215 1 9058 0 GVGIISEGNETVEDIAAR MVTGDHPITAKAIAKGVGIISEGNETVEDI IISEGNETVEDIAARLNIPVSQVNPRDAKA K G V A R L 2 1 1 1 0 0 3 3 0 3 0 0 0 0 0 1 1 0 0 2 0 0 18 0 1828.9167 P05023;P13637;P50993 P05023 630 647 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2;3 1.0971E-44 364.99 By MS/MS 4 1.87 1 1 1 2 1 1 1 8 27859000 27859000 0 5573 481 5757 13670;13671;13672;13673;13674;13675;13676;13677 11216;11217;11218;11219;11220;11221 11217 6 3025400 0 GVGSGGQGPPPPR TAQLTGPEAGRKPARGVGSGGQGPPPPRRE ARGVGSGGQGPPPPRRESRTETRWGPRPGS R G V P R R 0 1 0 0 0 1 0 5 0 0 0 0 0 0 4 1 0 0 0 1 0 0 13 0 1161.5891 P48634 P48634 905 917 PRRC2A Protein PRRC2A yes yes 2 1.6255E-07 205.18 By MS/MS 2 0.816 1 1 1 3 920460 920460 0 5574 938 5758 13678;13679;13680 11222;11223;11224 11223 3 258870 0 GVGTESGSESGSSNAKEPK ESHFLRVFLFFRPFRGVGTESGSESGSSNA ESGSESGSSNAKEPKTRAGGFASALERHSE R G V P K T 1 0 1 0 0 0 3 4 0 0 0 2 0 0 1 5 1 0 0 1 0 0 19 1 1806.8232 Q9Y2Q9 Q9Y2Q9 28 46 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.018984 67.416 By MS/MS 9 0 1 1 294920 294920 0 5575 2838 5759 13681 11225 11225 1 5804.2 0 GVIDLIFEK KQVTQLAIDTEERLKGVIDLIFEKAISEPN TEERLKGVIDLIFEKAISEPNFSVAYANMC K G V E K A 0 0 0 1 0 0 1 1 0 2 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1032.5855 Q04637 Q04637 796 804 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00061143 143.28 By MS/MS 2.5 1.12 1 1 1 1 4 3309500 3309500 0 5576 1291 5760 13682;13683;13684;13685 11226;11227 11226 2 973590 0 GVIDLVFEK KQVSGLTVDTEERLKGVIDLVFEKAIDEPS TEERLKGVIDLVFEKAIDEPSFSVAYANMC K G V E K A 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 0 0 0 0 2 0 0 9 0 1018.5699 O43432 O43432 790 798 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0020347 120.87 By MS/MS 2 0 1 1 270430 270430 0 5577 210 5761 13686 11228 11228 1 91472 0 GVIFTEAFVAR RLGRIISGHIDLDNRGVIFTEAFVARHKAR LDNRGVIFTEAFVARHKARIRGLFSAITRP R G V A R H 2 1 0 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 2 0 0 11 0 1208.6554 O94874 O94874 175 185 UFL1 E3 UFM1-protein ligase 1 yes yes 2 9.7115E-07 191.17 By MS/MS 4 0 1 1 611560 611560 0 5578 372 5762 13687 11229 11229 1 57552 0 GVIFYLR PAVPQAPVQGEDYGKGVIFYLRDKVVVGIV VQGEDYGKGVIFYLRDKVVVGIVLWNIFNR K G V L R D 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 1 1 0 0 7 0 866.50142 O95831 O95831 563 569 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.016877 117.54 By MS/MS 5 0 1 1 1993300 1993300 0 5579 429 5763 13688 11230 11230 1 19992 0 GVILLIVDK LELLNVGVESKLILKGVILLIVDKALEEPK SKLILKGVILLIVDKALEEPKYSSLYAQLC K G V D K A 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 2 0 0 9 0 968.62702 P78344 P78344 113 121 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.007083 105.57 By MS/MS 4.5 0.5 1 1 2 1277800 1277800 0 5580 1219 5764 13689;13690 11231 11231 1 105020 0 GVINIIPGSGGIAGQR ALKFAELSVKAGFPKGVINIIPGSGGIAGQ VINIIPGSGGIAGQRLSEHPDIRKLGFTGS K G V Q R L 1 1 1 0 0 1 0 5 0 4 0 0 0 0 1 1 0 0 0 1 0 0 16 0 1507.8471 Q3SY69 Q3SY69 642 657 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.000789 124.48 By MS/MS 4.5 0.5 1 1 2 2278900 2278900 0 5581 1578 5765 13691;13692 11232 11232 1 175250 0 GVITMNEEYETR LRSLTRQLVQDENVRGVITMNEEYETRFLC NVRGVITMNEEYETRFLCNSSQEWKRLGVE R G V T R F 0 1 1 0 0 0 3 1 0 1 0 0 1 0 0 0 2 0 1 1 0 0 12 0 1440.6555 Q8WUK0 Q8WUK0 67 78 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 8.3616E-13 240.37 By MS/MS 9 0 2 2 1816100 1816100 0 5582 2016 5766;5767 13693;13694 11233;11234 11233 976 2 35741 0 GVIVDKDFSHPQMPK EGKVGGRLEDTKLIKGVIVDKDFSHPQMPK GVIVDKDFSHPQMPKKVEDAKIAILTCPFE K G V P K K 0 0 0 2 0 1 0 1 1 1 0 2 1 1 2 1 0 0 0 2 0 0 15 1 1696.8607 P48643 P48643 227 241 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.00061364 123.95 By MS/MS 5.5 0.5 1 1 2 11251000 11251000 0 5583 940 5768 13695;13696 11235 11235 1 78490 0 GVIVVEVEDR GGVMAVGARHSFDKKGVIVVEVEDREKKAV SFDKKGVIVVEVEDREKKAVNLERALEMAI K G V D R E 0 1 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 4 0 0 10 0 1113.603 Q9BSH4 Q9BSH4 187 196 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 0.00067636 145.17 By MS/MS 8 0 1 1 0 0 0 5584 2306 5769 13697 11236 11236 1 0 0 GVLAGLNDGAER G V E R 2 1 1 1 0 0 1 3 0 0 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1170.5993 REV__P49411 yes yes 2 0.0063277 99.688 By MS/MS 3 0 1 1 356300 356300 0 + 5585 2961 5770 13698 11237 11237 1 6519.3 0 GVLFFSTPR TGAQGLREEVHTMLRGVLFFSTPRTFQEMI VHTMLRGVLFFSTPRTFQEMIQRLYGCFLR R G V P R T 0 1 0 0 0 0 0 1 0 0 1 0 0 2 1 1 1 0 0 1 0 0 9 0 1022.5549 Q9UJX6 Q9UJX6 159 167 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 0.0002054 155.75 By MS/MS 4 0 1 1 428940 428940 0 5586 2754 5771 13699 11238 11238 1 40366 0 GVLFGVPGAFTPGCSK PGNKVNLAELFKGKKGVLFGVPGAFTPGCS VLFGVPGAFTPGCSKTHLPGFVEQAEALKA K G V S K T 1 0 0 0 1 0 0 4 0 0 1 1 0 2 2 1 1 0 0 2 0 0 16 0 1592.8021 P30044 P30044 87 102 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.021804 81.525 By MS/MS 10 0 1 1 86704 86704 0 5587 763 5772 13700 11239 11239 1 4673 0 GVLFYGPPGCGK EHPDKFLKFGMTPSKGVLFYGPPGCGKTLL PSKGVLFYGPPGCGKTLLAKAIANECQANF K G V G K T 0 0 0 0 1 0 0 4 0 0 1 1 0 1 2 0 0 0 1 1 0 0 12 0 1250.6118 P55072 P55072 513 524 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0003302 117.04 By MS/MS 4.5 0.5 1 1 2 13092000 13092000 0 5588 1054 5773 13701;13702 11240;11241 11241 2 1035700 0 GVLLYGPPGCGK KKHLFENSRLLQPPKGVLLYGPPGCGKTLI PPKGVLLYGPPGCGKTLIAKATAKEAGCRF K G V G K T 0 0 0 0 1 0 0 4 0 0 2 1 0 0 2 0 0 0 1 1 0 0 12 0 1216.6274 Q8NBU5 Q8NBU5 128 139 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 0.012264 89.355 By MS/MS 6.5 0.5 1 1 2 1432900 1432900 0 5589 1945 5774 13703;13704 11242 11242 1 17617 0 GVLLYGPPGTGK KHPELFEALGIAQPKGVLLYGPPGTGKTLL QPKGVLLYGPPGTGKTLLARAVAHHTDCTF K G V G K T 0 0 0 0 0 0 0 4 0 0 2 1 0 0 2 0 1 0 1 1 0 0 12 0 1157.6445 Q8NB90;P62195 P62195 185 196 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 no no 2 0.0074771 96.331 By MS/MS 7 0.816 1 1 1 3 13643000 13643000 0 5590 1142;1937 5775 13705;13706;13707 11243;11244;11245 11244 3 188630 0 GVLQTAAER PELFHQLMLWKGDLKGVLQTAAERGELTDN WKGDLKGVLQTAAERGELTDNLVAMAPAAG K G V E R G 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 943.50869 Q8TEQ6 Q8TEQ6 934 942 GEMIN5 Gem-associated protein 5 yes yes 2 0.00083185 120.31 By MS/MS 3 0.816 1 1 1 3 1716600 1716600 0 5591 2002 5776 13708;13709;13710 11246 11246 1 132420 0 GVMEVEGPVGPGVGER G V E R 0 1 0 0 0 0 3 5 0 0 0 0 1 0 2 0 0 0 0 4 0 0 16 0 1567.7664 REV__P27361 yes yes 2 0.0067712 96.229 By MS/MS 10 0 1 1 114640 114640 0 + 5592 2957 5777 13711 11247 11247 1 6178.5 0 GVMINKDVTHPR EKIPGGIIEDSCVLRGVMINKDVTHPRMRR VLRGVMINKDVTHPRMRRYIKNPRIVLLDS R G V P R M 0 1 1 1 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 2 0 0 12 1 1365.7187 P49368 P49368 217 228 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.004731 96.334 By MS/MS 6 0.816 1 1 1 3 7208100 7208100 0 5593 947 5778 13712;13713;13714 11248;11249 11248 2 63985 0 GVNEDTYSGILDCAR NPCDVVKTRLQSLQRGVNEDTYSGILDCAR GVNEDTYSGILDCARKILRHEGPSAFLKGA R G V A R K 1 1 1 2 1 0 1 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 15 0 1668.7413 Q9H936 Q9H936 259 273 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 1.0174E-43 328.43 By MS/MS 8 0 1 1 15261000 15261000 0 5594 2480 5779 13715 11250 11250 1 192670 0 GVNEDTYSGILDCARK NPCDVVKTRLQSLQRGVNEDTYSGILDCAR VNEDTYSGILDCARKILRHEGPSAFLKGAY R G V R K I 1 1 1 2 1 0 1 2 0 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1796.8363 Q9H936 Q9H936 259 274 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 0.00030766 195.72 By MS/MS 8 0 1 1 1210200 1210200 0 5595 2480 5780 13716 11251 11251 1 15279 0 GVNKEFTVNIMDTCER PQEYFMELTFNQAAKGVNKEFTVNIMDTCE VNKEFTVNIMDTCERCNGKGNEPGTKVQHC K G V E R C 0 1 2 1 1 0 2 1 0 1 0 1 1 1 0 0 2 0 0 2 0 0 16 1 1911.8819 Q96EY1 Q96EY1 223 238 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 3 0.013192 85.28 By MS/MS 7 0 1 1 948120 948120 0 5596 2150 5781 13717 11252 11252 1018 1 14884 0 GVNTFSPEGR ______________________________ SEYDRGVNTFSPEGRLFQVEYAIEAIKLGS R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 P28066 P28066 11 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0083488 98.048 By MS/MS 8 0 1 1 2207500 2207500 0 5597 748 5782 13718 11253 11253 1 27870 0 GVNTVFHCASPPPSSNNK LGDLCSRQDLYPALKGVNTVFHCASPPPSS TVFHCASPPPSSNNKELFYRVNYIGTKNVI K G V N K E 1 0 3 0 1 0 0 1 1 0 0 1 0 1 3 3 1 0 0 2 0 0 18 0 1911.8897 Q15738 Q15738 97 114 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.0038538 95.236 By MS/MS 7 0 1 1 545380 545380 0 5598 1526 5783 13719 11254;11255;11256 11255 3 8561.4 0 GVNVSALSR LSDISSQTQSIYIPRGVNVSALSRDIKWDF SIYIPRGVNVSALSRDIKWDFTPCKNLRVG R G V S R D 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 9 0 901.49813 P38606 P38606 121 129 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 0.0018505 123.21 By MS/MS 5.5 0.5 1 1 2 3549300 3549300 0 5599 849 5784 13720;13721 11257 11257 1 34356 0 GVPTGFILPIR MAKTHLSLSHNPEQKGVPTGFILPIRDIRA PEQKGVPTGFILPIRDIRASVGAGFLYPLV K G V I R D 0 1 0 0 0 0 0 2 0 2 1 0 0 1 2 0 1 0 0 1 0 0 11 0 1168.6968 P11586 P11586 879 889 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.019834 85.731 By MS/MS 5.33 1.25 1 1 1 3 1615500 1615500 0 5600 582 5785 13722;13723;13724 11258;11259 11258 2 137960 0 GVQFALK TVDMTGIPTLDNLQKGVQFALKYQSLGQCV PTLDNLQKGVQFALKYQSLGQCVYVHCKAG K G V L K Y 1 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 761.44357 Q8WUK0 Q8WUK0 114 120 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.02729 106.76 By MS/MS 9 0 1 1 756510 756510 0 5601 2016 5786 13725 11260 11260 1 14888 0 GVQHPLR QSRKDILKDLVEMCRGVQHPLRGLFLRNYL KDLVEMCRGVQHPLRGLFLRNYLLQCTRNI R G V L R G 0 1 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 805.45587 Q96QK1 Q96QK1 139 145 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.016816 117.7 By MS/MS 5 0 1 1 921950 921950 0 5602 2217 5787 13726 11261 11261 1 9246.7 0 GVQLDSAGLER LGLPLDMVELMLEEKGVQLDSAGLERLAQE LEEKGVQLDSAGLERLAQEEAQHRARQAEP K G V E R L 1 1 0 1 0 1 1 2 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1143.5884 Q5JTZ9 Q5JTZ9 461 471 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0014186 113.38 By MS/MS 4.5 0.5 1 1 2 3180800 3180800 0 5603 1613 5788 13727;13728 11262 11262 1 266940 0 GVQLQTHPNVDKK KYGRIRLHVENEDKKGVQLQTHPNVDKKLF KKGVQLQTHPNVDKKLFTAESLIGLKNPEK K G V K K L 0 0 1 1 0 2 0 1 1 0 1 2 0 0 1 0 1 0 0 2 0 0 13 1 1462.7892 P48444 P48444 324 336 ARCN1 Coatomer subunit delta yes yes 2;3 0.0010459 147.62 By MS/MS 6 0.707 1 2 1 4 11132000 11132000 0 5604 934 5789 13729;13730;13731;13732 11263;11264 11264 2 80057 0 GVQQDEALQLPK ATYESVLFHQLQEIKGVQQDEALQLPKDLD EIKGVQQDEALQLPKDLDYLTIRDVSLSHE K G V P K D 1 0 0 1 0 3 1 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 12 0 1324.6987 Q9Y2Z2 Q9Y2Z2 626 637 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.053704 69.721 By MS/MS 5 0 1 1 897000 897000 0 5605 2851 5790 13733 11265 11265 0 8996.5 0 GVQVETISPGDGR ______________________________ ______________________________ M G V G R T 0 1 0 1 0 1 1 3 0 1 0 0 0 0 1 1 1 0 0 2 0 0 13 0 1313.6575 P62942 P62942 2 14 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 2 0.0012919 120.86 By MS/MS 10 0 1 1 397900 397900 0 5606 1189 5791 13734 11266 11266 1 21446 0 GVQYLNEIK GPDGTGPNILTDITKGVQYLNEIKDSVVAG LTDITKGVQYLNEIKDSVVAGFQWATKEGA K G V I K D 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 0 1062.571 P13639 P13639 668 676 EEF2 Elongation factor 2 yes yes 2 0.0091739 101.9 By MS/MS 4.5 0.5 1 1 2 3607700 3607700 0 5607 602 5792 13735;13736 11267 11267 1 280910 0 GVSAVVVGADR TLITDSMVAAAMAHRGVSAVVVGADRVVAN MAHRGVSAVVVGADRVVANGDTANKVGTYQ R G V D R V 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 4 0 0 11 0 1028.5615 Q9BV20 Q9BV20 239 249 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.029044 80.916 By MS/MS 7 0 1 1 912280 912280 0 5608 2328 5793 13737 11268 11268 1 14321 0 GVSINQFCK LAMPGPPLGPVLGQRGVSINQFCKEFNERT PVLGQRGVSINQFCKEFNERTKDIKEGIPL R G V C K E 0 0 1 0 1 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1051.5121 Q9Y3B7 Q9Y3B7 43 51 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 6.7803E-05 168.23 By MS/MS 9 0 1 1 4452000 4452000 0 5609 2866 5794 13738 11269 11269 1 87617 0 GVSKSIDEVTNSEKIK G V I K 0 0 1 1 0 0 2 1 0 2 0 3 0 0 0 3 1 0 0 2 0 0 16 2 1732.9207 REV__Q5TB80 yes yes 2;3 0.0038143 163.12 By MS/MS 7.75 0.433 1 3 4 72928000 72928000 0 + 5610 2968 5795 13739;13740;13741;13742 11270;11271 11271 2 921450 0 GVSTCSTR GGGFGGGSCQLGGGRGVSTCSTRFVSGGSA CQLGGGRGVSTCSTRFVSGGSAGGYGGGVS R G V T R F 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 0 0 8 0 866.39162 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 P13646 28 35 KRT13 Keratin, type I cytoskeletal 13 no no 2 0.010008 122.74 By MS/MS 1 0 1 1 90621 0 90621 + 5611 603;51 5796 13743 11272 11272 1 0 90621 GVTDHTQR LDIYHNVLYENPNLKGVTDHTQRLSIITKD YENPNLKGVTDHTQRLSIITKDLFQVAFNR K G V Q R L 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 912.44134 Q14204 Q14204 3848 3855 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 8.9402E-05 176.41 By MS/MS 1.5 0.5 1 1 2 1389600 1389600 0 5612 1433 5797 13744;13745 11273;11274 11273 2 406040 0 GVTFLFPIQAK NFPISEETIKLLKGRGVTFLFPIQAKTFHH LKGRGVTFLFPIQAKTFHHVYSGKDLIAQA R G V A K T 1 0 0 0 0 1 0 1 0 1 1 1 0 2 1 0 1 0 0 1 0 0 11 0 1219.6965 Q9NR30 Q9NR30 205 215 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0029099 109.44 By MS/MS 4 0 1 1 60945 60945 0 5613 2545 5798 13746 11275;11276 11275 2 5735.3 0 GVTIKPTVDDD VEKHWRLIGWGQIRRGVTIKPTVDDD____ QIRRGVTIKPTVDDD_______________ R G V D D - 0 0 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 11 1 1158.5768 P41091;Q2VIR3 P41091 462 472 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.00013987 166.07 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 19468000 19267000 200660 5614 866 5799 13747;13748;13749;13750;13751;13752 11277;11278;11279 11277 3 178780 205620 GVTIQPLKR DPSQPIDLTQLVNGRGVTIQPLKRDYGVQL QLVNGRGVTIQPLKRDYGVQLVEEGADTFT R G V K R D 0 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 9 1 1010.6237 Q9P015 Q9P015 126 134 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.014993 110.31 By MS/MS By matching 8.33 0.471 2 1 2 1 2717200 2671800 45362 5615 2659 5800 13753;13754;13755 11280 11280 1 35110 61214 GVTQYYAYVTER QKPYEINLMEELTLKGVTQYYAYVTERQKV TLKGVTQYYAYVTERQKVHCLNTLFSRLQI K G V E R Q 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 2 0 3 2 0 0 12 0 1448.6936 P26196 P26196 308 319 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 2 0.00020609 150.09 By MS/MS 5.5 0.5 1 1 2 2275800 2275800 0 5616 729 5801 13756;13757 11281 11281 1 17141 0 GVTSILPVLR ESKGEHVPGFCLPKKGVTSILPVLREGVLT CLPKKGVTSILPVLREGVLTGSPEQKEEAA K G V L R E 0 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 1 0 0 2 0 0 10 0 1053.6546 Q92616 Q92616 2260 2269 GCN1L1 Translational activator GCN1 yes yes 2 0.026283 83.783 By MS/MS 2 0 1 1 242940 242940 0 5617 2064 5802 13758 11282 11282 1 82173 0 GVVDRLEVVNKR REITWKDFVNNYLSKGVVDRLEVVNKRFVR LSKGVVDRLEVVNKRFVRVTFTPGKTPVDG K G V K R F 0 2 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 12 2 1382.7994 Q9Y4W6 Q9Y4W6 183 194 AFG3L2 AFG3-like protein 2 yes yes 3 0.029118 77.74 By MS/MS 5 0 1 1 4299900 4299900 0 5618 2902 5803 13759 11283 11283 1 43126 0 GVVDSDDLPLNVSR DDFHDMMPKYLNFVKGVVDSDDLPLNVSRE KGVVDSDDLPLNVSRETLQQHKLLKVIRKK K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 2.4296E-07 213.63 By MS/MS By matching 4.75 0.829 2 1 1 3 1 18892000 18805000 87032 5619 615 5804 13760;13761;13762;13763 11284;11285 11284 2 1487500 185440 GVVDSEDLPLNISR DSCDELIPEYLNFIRGVVDSEDLPLNISRE RGVVDSEDLPLNISREMLQQSKILKVIRKN R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P07900;P08238 P08238 379 392 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2 4.2959E-11 234.24 By MS/MS By MS/MS 4.17 1.57 1 1 1 4 3 1 1 11 1 284110000 283900000 213940 5620 521;513 5805 13764;13765;13766;13767;13768;13769;13770;13771;13772;13773;13774;13775 11286;11287;11288;11289;11290;11291;11292;11293;11294;11295;11296;11297;11298 11289 13 22050000 455830 GVVEVTHDLQK MGKMQKKAVAISLPKGVVEVTHDLQKHLAG SLPKGVVEVTHDLQKHLAGLGLTEAIDKNK K G V Q K H 0 0 0 1 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 3 0 0 11 0 1223.651 P50454 P50454 309 319 SERPINH1 Serpin H1 yes yes 2 1.4279E-05 178.55 By MS/MS 6.5 0.5 1 1 2 5764300 5764300 0 5621 975 5806 13776;13777 11299;11300 11299 2 59943 0 GVVEYEAQCSR VLVQHNLVSYQVHKRGVVEYEAQCSRVLRM VHKRGVVEYEAQCSRVLRMLRYPRYIYTTK R G V S R V 1 1 0 0 1 1 2 1 0 0 0 0 0 0 0 1 0 0 1 2 0 0 11 0 1296.5768 Q9BUI4 Q9BUI4 71 81 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 2 1.484E-06 184.71 By MS/MS 6 0 1 1 525020 525020 0 5622 2325 5807 13778 11301 11301 1 3609.1 0 GVVLCTFTR PPRKLGPTEGRPQLKGVVLCTFTRKPKKPN GRPQLKGVVLCTFTRKPKKPNSANRKCCRV K G V T R K 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 2 0 0 9 0 1051.5485 O15235 O15235 60 68 MRPS12 28S ribosomal protein S12, mitochondrial yes yes 2 0.0009371 134.81 By MS/MS 10 0 1 1 2034700 2034700 0 5623 173 5808 13779 11302 11302 1 109660 0 GVVPLAGTDGETTTQGLDGLSER TIQDKGIVVGIKVDKGVVPLAGTDGETTTQ DGETTTQGLDGLSERCAQYKKDGADFAKWR K G V E R C 1 1 0 2 0 1 2 5 0 0 3 0 0 0 1 1 4 0 0 2 0 0 23 0 2272.1183 P09972 P09972 112 134 ALDOC Fructose-bisphosphate aldolase C yes yes 2 4.9403E-10 204.07 By MS/MS 7 0 1 1 3003000 3003000 0 5624 545 5809 13780 11303 11303 1 47142 0 GVVPLAGTNGETTTQGLDGLSER VIKSKGGVVGIKVDKGVVPLAGTNGETTTQ NGETTTQGLDGLSERCAQYKKDGADFAKWR K G V E R C 1 1 1 1 0 1 2 5 0 0 3 0 0 0 1 1 4 0 0 2 0 0 23 0 2271.1343 P04075 P04075 112 134 ALDOA Fructose-bisphosphate aldolase A yes yes 2 3.9365E-10 208.49 By MS/MS 7 0 1 1 1568400 1568400 0 5625 467 5810 13781 11304 11304 1 24621 0 GVVQELQQAISK VVRIASLEVENQSLRGVVQELQQAISKLEA SLRGVVQELQQAISKLEARLNVLEKSSPGH R G V S K L 1 0 0 0 0 3 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1298.7194 P29692 P29692 96 107 EEF1D Elongation factor 1-delta yes yes 2 0.0014909 116.03 By MS/MS 7.5 0.5 1 1 2 687980 687980 0 5626 760 5811 13782;13783 11305 11305 1 10725 0 GVYPDLLATSGDYLR HPYPTTKLMWIPDTKGVYPDLLATSGDYLR GVYPDLLATSGDYLRVWRVGETETRLECLL K G V L R V 1 1 0 2 0 0 0 2 0 0 3 0 0 0 1 1 1 0 2 1 0 0 15 0 1638.8253 P61962 P61962 82 96 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 2 0.0004164 167.2 By MS/MS 7.5 0.5 1 1 2 375790 375790 0 5627 1133 5812 13784;13785 11306;11307;11308 11307 3 5643.9 0 GVYSEETLR TQALTAAIPPESLTRGVYSEETLRARFYAV PESLTRGVYSEETLRARFYAVQKLARRVAM R G V L R A 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 9 0 1052.5138 Q16891 Q16891 624 632 IMMT MICOS complex subunit MIC60 yes yes 2 0.020263 88.819 By MS/MS By matching 4 0 2 1 1 2496400 2454200 42275 5628 1563 5813 13786;13787 11309 11309 1 230950 90074 GWDENVYYTVPLVR LQSREETRNAAWRKRGWDENVYYTVPLVRH RGWDENVYYTVPLVRHMESRIMIPLKISPL R G W V R H 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 0 1 1 2 3 0 0 14 0 1709.8413 Q9BPW8 Q9BPW8 255 268 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 2.2969E-11 240.8 By MS/MS 8 0 1 1 494180 494180 0 5629 2278 5814 13788 11310 11310 1 6239 0 GWENHVEGQK QLTAYMKRVEDVLGKGWENHVEGQKLKQDG DVLGKGWENHVEGQKLKQDGDSFRMKLNTQ K G W Q K L 0 0 1 0 0 1 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 10 0 1182.5418 Q14204 Q14204 672 681 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.04205 76.17 By MS/MS 1.5 0.5 1 1 2 208180 208180 0 5630 1433 5815 13789;13790 11311 11311 1 60820 0 GWGSALAAAR TGPEPMPSYAQLVQRGWGSALAAARGCTDC QLVQRGWGSALAAARGCTDCGWGLARRGLA R G W A R G 4 1 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 10 0 958.49846 P27544 P27544 26 35 CERS1 Ceramide synthase 1 yes yes 2 0.033175 80.455 By MS/MS 1 0 1 1 90747 90747 0 5631 742 5816 13791 11312 11312 1 21867 0 GYAFNHSADFETVR GRDITRYLIKLLLLRGYAFNHSADFETVRM RGYAFNHSADFETVRMIKEKLCYVGYNIEQ R G Y V R M 2 1 1 1 0 0 1 1 1 0 0 0 0 2 0 1 1 0 1 1 0 0 14 0 1612.727 P61160 P61160 201 214 ACTR2 Actin-related protein 2 yes yes 2 0.00047573 153.75 By MS/MS 7 0 1 1 520360 520360 0 5632 1112 5817 13792 11313 11313 1 8168.7 0 GYAVLGGER LNDIAAVPATAMPFRGYAVLGGERGGPEVQ TAMPFRGYAVLGGERGGPEVQQVPAGERPL R G Y E R G 1 1 0 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 920.47158 P49327 P49327 469 477 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0021498 119.41 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 27513000 27513000 0 5633 946 5818 13793;13794;13795;13796;13797;13798 11314;11315;11316;11317 11314 4 5207700 0 GYDFESETDTETIAK IITNYKDLKKFLESKGYDFESETDTETIAK GYDFESETDTETIAKLVKYMYDNRESQDTS K G Y A K L 1 0 0 2 0 0 3 1 0 1 0 1 0 1 0 1 3 0 1 0 0 0 15 0 1704.7366 Q06210 Q06210 140 154 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 7.2846E-24 280.17 By MS/MS 5 0 1 1 4295300 4295300 0 5634 1295 5819 13799 11318 11318 1 43080 0 GYDVDFPR VIPLQLLAFHLAVLRGYDVDFPRNLAKSVT FHLAVLRGYDVDFPRNLAKSVTVE______ R G Y P R N 0 1 0 2 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 8 0 967.43995 Q06210;O94808 Q06210 683 690 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes no 2 0.047932 83.265 By MS/MS 5 0 1 1 1148500 1148500 0 5635 1295 5820 13800 11319 11319 1 11519 0 GYDVIAQAQSGTGK KPSAIQQRAILPCIKGYDVIAQAQSGTGKT KGYDVIAQAQSGTGKTATFAISILQQIELD K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 P60842;Q14240 P60842 69 82 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.3003E-21 269.44 By MS/MS 5.33 2.62 2 1 1 1 1 5 1 1 1 1 15 1734300000 1734300000 0 5636 1097 5821 13801;13802;13803;13804;13805;13806;13807;13808;13809;13810;13811;13812;13813;13814;13815 11320;11321;11322;11323;11324;11325;11326;11327;11328;11329;11330;11331;11332;11333;11334;11335;11336;11337;11338 11338 17 21886000 0 GYEIDEDIVSR YKHLKMCIRVEMQSRGYEIDEDIVSRVAEE MQSRGYEIDEDIVSRVAEEMTFFPKEERVF R G Y S R V 0 1 0 2 0 0 2 1 0 2 0 0 0 0 0 1 0 0 1 1 0 0 11 0 1294.6041 O14656 O14656 289 299 TOR1A Torsin-1A yes yes 2 0.0054194 107.83 By MS/MS 7 0 1 1 0 0 0 5637 130 5822 13816 11339 11339 1 0 0 GYELLFQPEVVR ANDTVDFPKRTSPARGYELLFQPEVVRIYI PARGYELLFQPEVVRIYISLLKESKTPAIL R G Y V R I 0 1 0 0 0 1 2 1 0 0 2 0 0 1 1 0 0 0 1 2 0 0 12 0 1448.7664 O60716 O60716 655 666 CTNND1 Catenin delta-1 yes yes 2 0.00038764 138.25 By MS/MS 6 1.41 1 1 1 1 1 5 4058700 4058700 0 5638 272 5823 13817;13818;13819;13820;13821 11340;11341;11342 11342 3 276240 0 GYFDQELK PVTQVNEVTGTLRIKGYFDQELKAWLLEKG TGTLRIKGYFDQELKAWLLEKGF_______ K G Y L K A 0 0 0 1 0 1 1 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 8 0 998.47091 Q13405 Q13405 151 158 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 0.0049312 125.81 By MS/MS 10 0 1 1 351750 351750 0 5639 1378 5824 13822 11343 11343 1 18958 0 GYFFPTSAR ANILGYAVSTFAMVKGYFFPTSARDCKFTG TFAMVKGYFFPTSARDCKFTGNFFYNYMMG K G Y A R D 1 1 0 0 0 0 0 1 0 0 0 0 0 2 1 1 1 0 1 0 0 0 9 0 1044.5029 Q9UBM7 Q9UBM7 199 207 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.0034499 100.19 By MS/MS 5.4 3.26 1 1 1 1 1 5 4007900 4007900 0 5640 2701 5825 13823;13824;13825;13826;13827 11344;11345;11346 11345 3 255970 0 GYGFVHFETQEAAER NILSCKVVCDENGSKGYGFVHFETQEAAER GYGFVHFETQEAAERAIEKMNGMLLNDRKV K G Y E R A 2 1 0 0 0 1 3 2 1 0 0 0 0 2 0 0 1 0 1 1 0 0 15 0 1739.7903 P11940 P11940 139 153 PABPC1 Polyadenylate-binding protein 1 yes yes 2;3 0.00013424 179.59 By MS/MS 5 0 2 2 3916200 3916200 0 5641 586 5826 13828;13829 11347;11348 11348 2 39278 0 GYGLFAGPCK RNVDSNNKELSIAIRGYGLFAGPCKVINAK SIAIRGYGLFAGPCKVINAKDVDFMYVELI R G Y C K V 1 0 0 0 1 0 0 3 0 0 1 1 0 1 1 0 0 0 1 0 0 0 10 0 1068.5063 P78527 P78527 365 374 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0013659 116.54 By MS/MS 2 0.816 1 1 1 3 3791100 3791100 0 5642 1225 5827 13830;13831;13832 11349;11350;11351 11350 3 1046300 0 GYGYGQGAGTLNMDR EIYCKSCYGKKYGPKGYGYGQGAGTLNMDR GYGYGQGAGTLNMDRGERLGIKPESVQPHR K G Y D R G 1 1 1 1 0 1 0 5 0 0 1 0 1 0 0 0 1 0 2 0 0 0 15 0 1558.6834 Q16527 Q16527 70 84 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 1.1447E-16 260.57 By MS/MS 9 0 2 2 604770 604770 0 5643 1548 5828;5829 13833;13834 11352;11353 11353 875 2 11902 0 GYHYATCLEGALK ATELYHQKSVLIMGRGYHYATCLEGALKIK GRGYHYATCLEGALKIKEITYMHSEGILAG R G Y L K I 2 0 0 0 1 0 1 2 1 0 2 1 0 0 0 0 1 0 2 0 0 0 13 0 1481.6973 Q06210 Q06210 564 576 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2;3 1.2209E-05 193.28 By MS/MS 5 0 2 2 1984800 1984800 0 5644 1295 5830 13835;13836 11354;11355 11354 2 19907 0 GYIGVVNR DARDVLENKLLPLRRGYIGVVNRSQKDIEG KLLPLRRGYIGVVNRSQKDIEGKKDIRAAL R G Y N R S 0 1 1 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 1 2 0 0 8 0 876.48175 P50570;Q05193 P50570 230 237 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 2 0.01672 103.29 By MS/MS 4 0 1 1 1216600 1216600 0 5645 977 5831 13837 11356 11356 1 114490 0 GYISPYFINTSK LNDELEIIEGMKFDRGYISPYFINTSKGQK FDRGYISPYFINTSKGQKCEFQDAYVLLSE R G Y S K G 0 0 1 0 0 0 0 1 0 2 0 1 0 1 1 2 1 0 2 0 0 0 12 0 1388.6976 P10809 P10809 222 233 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 6.8443E-05 161.67 By MS/MS 6.5 1.12 1 1 1 1 4 74568000 74568000 0 5646 569 5832 13838;13839;13840;13841 11357;11358;11359 11357 3 557120 0 GYKHTLNQIDSVK AALAAVDYINKHLPRGYKHTLNQIDSVKVW PRGYKHTLNQIDSVKVWPRRPTGEVYDIEI R G Y V K V 0 0 1 1 0 1 0 1 1 1 1 2 0 0 0 1 1 0 1 1 0 0 13 1 1501.7889 CON__P12763 CON__P12763 55 67 yes yes 2;3 6.8267E-05 193.62 By MS/MS 5.8 0.748 2 2 1 5 10437000 10437000 0 + 5647 49 5833 13842;13843;13844;13845;13846 11360;11361;11362;11363 11362 4 90238 0 GYLADPAKFPEAR PPEELVPYYTDAKNRGYLADPAKFPEARLE NRGYLADPAKFPEARLELARKYGYILPDIT R G Y A R L 3 1 0 1 0 0 1 1 0 0 1 1 0 1 2 0 0 0 1 0 0 0 13 1 1433.7303 Q9P015 Q9P015 221 233 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2;3 0.032531 98.898 By MS/MS 8 0.707 1 2 1 4 6463200 6463200 0 5648 2659 5834 13847;13848;13849;13850 11364;11365 11365 2 84172 0 GYLDKLEPSK MAIEEQVAVIYAGVRGYLDKLEPSKITKFE YAGVRGYLDKLEPSKITKFENAFLSHVVSQ R G Y S K I 0 0 0 1 0 0 1 1 0 0 2 2 0 0 1 1 0 0 1 0 0 0 10 1 1148.6077 P25705 P25705 494 503 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00035502 155.84 By MS/MS 7 0.816 1 1 1 3 30253000 30253000 0 5649 723 5835 13851;13852;13853 11366 11366 1 220180 0 GYLDKLEPSKITK MAIEEQVAVIYAGVRGYLDKLEPSKITKFE VRGYLDKLEPSKITKFENAFLSHVVSQHQA R G Y T K F 0 0 0 1 0 0 1 1 0 1 2 3 0 0 1 1 1 0 1 0 0 0 13 2 1490.8344 P25705 P25705 494 506 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.028236 77.527 By MS/MS 7 0.816 1 1 1 3 9981400 9981400 0 5650 723 5836 13854;13855;13856 11367 11367 1 73504 0 GYLGPEQLPDCLK VAADLSHIETKAAVKGYLGPEQLPDCLKGC VKGYLGPEQLPDCLKGCDVVVIPAGVPRKP K G Y L K G 0 0 0 1 1 1 1 2 0 0 3 1 0 0 2 0 0 0 1 0 0 0 13 0 1488.7283 P40926 P40926 79 91 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.00059565 133.42 By MS/MS 7.5 0.5 1 1 2 2237200 2237200 0 5651 862 5837 13857;13858 11368;11369 11369 2 30228 0 GYLISGSSYAR KLTLIDPETLLPRLKGYLISGSSYARSSVV PRLKGYLISGSSYARSSVVTAVKFTISDHP K G Y A R S 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 3 0 0 2 0 0 0 11 0 1172.5826 Q86VP6 Q86VP6 972 982 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0009187 123.21 By MS/MS 3 0 1 1 337220 337220 0 5652 1831 5838 13859 11370 11370 1 6170.2 0 GYLLYGPPGCGK DNPKWYTDRGIPYRRGYLLYGPPGCGKSSF YRRGYLLYGPPGCGKSSFITALAGELEHSI R G Y G K S 0 0 0 0 1 0 0 4 0 0 2 1 0 0 2 0 0 0 2 0 0 0 12 0 1280.6223 Q9Y276 Q9Y276 225 236 BCS1L Mitochondrial chaperone BCS1 yes yes 2 0.0012529 120.46 By MS/MS 7 0 1 1 469790 469790 0 5653 2817 5839 13860 11371 11371 1 7374.9 0 GYNDDYYEESYFTTR YDLPKKEDALLYQSKGYNDDYYEESYFTTR GYNDDYYEESYFTTRTYGEPESAGPSRAVR K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 P50402 P50402 89 103 EMD Emerin yes yes 2 4.4817E-33 307.77 By MS/MS 8 0.816 1 1 1 3 14877000 14877000 0 5654 973 5840 13861;13862;13863 11372;11373;11374;11375 11372 4 220780 0 GYNFEDLTDR DGKTVLASDTHQRIRGYNFEDLTDRNIVQE HQRIRGYNFEDLTDRNIVQEDHPIMSFTIS R G Y D R N 0 1 1 2 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 10 0 1228.536 Q9H7D7 Q9H7D7 511 520 WDR26 WD repeat-containing protein 26 yes yes 2 0.032514 89.08 By MS/MS 5 0 1 1 848080 848080 0 5655 2461 5841 13864 11376 11376 0 8505.8 0 GYPTLLLFR DCTAERNICSKYSVRGYPTLLLFRGGKKVS SKYSVRGYPTLLLFRGGKKVSEHSGGRDLD R G Y F R G 0 1 0 0 0 0 0 1 0 0 3 0 0 1 1 0 1 0 1 0 0 0 9 0 1078.6175 Q8NBS9 Q8NBS9 395 403 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.053906 74.255 By MS/MS 6 0 1 1 139250 139250 0 5656 1944 5842 13865 11377 11377 1 957.21 0 GYQGSPDLR EDPEMLIDLMYRIARGYQGSPDLRLTWLQN MYRIARGYQGSPDLRLTWLQNMAGKHAELG R G Y L R L 0 1 0 1 0 1 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 9 0 991.47231 Q96HP0 Q96HP0 1588 1596 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0024578 115.49 By MS/MS 2 0 1 1 303180 303180 0 5657 2166 5843 13866 11378 11378 1 102550 0 GYQTSPDLR EDPEMLIDLMYRIAKGYQTSPDLRLTWLQN MYRIAKGYQTSPDLRLTWLQNMAGKHSERS K G Y L R L 0 1 0 1 0 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 1035.4985 Q96N67 Q96N67 1679 1687 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0071098 105.52 By MS/MS 1.5 0.5 1 1 2 1255000 1255000 0 5658 2201 5844 13867;13868 11379 11379 1 420880 0 GYSFTTTAER GRDLTDYLMKILTERGYSFTTTAEREIVRD ILTERGYSFTTTAEREIVRDIKEKLCYVAL R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P60709;P63261 P63261 197 206 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 1.2673E-10 213.85 By MS/MS By MS/MS 7.71 1.03 1 2 2 2 3 4 86359000 84924000 1435000 5659 1095;1203 5845 13869;13870;13871;13872;13873;13874;13875 11380;11381;11382;11383 11382 4 1325400 2447900 GYSFTTTAEREIVR GRDLTDYLMKILTERGYSFTTTAEREIVRD RGYSFTTTAEREIVRDIKEKLCYVALDFEQ R G Y V R D 1 2 0 0 0 0 2 1 0 1 0 0 0 1 0 1 3 0 1 1 0 0 14 1 1628.8158 P60709;P63261 P63261 197 210 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0032354 131.42 By MS/MS 7.5 0.5 1 1 2 6345800 6345800 0 5660 1095;1203 5846 13876;13877 11384;11385 11385 2 98668 0 GYSQQDAQEFLR TTLFQGIKTVNPTFRGYSQQDAQEFLRCLM TFRGYSQQDAQEFLRCLMDLLHEELKEQVM R G Y L R C 1 1 0 1 0 3 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 12 0 1440.6634 Q8TEY7 Q8TEY7 266 277 USP33 Ubiquitin carboxyl-terminal hydrolase 33 yes yes 2 0.00018001 151.79 By MS/MS 4 0 1 1 2061500 2061500 0 5661 2006 5847 13878 11386 11386 1 194000 0 GYTAEQVAAVK DAPSANGEAGGESTKGYTAEQVAAVKRVKQ ESTKGYTAEQVAAVKRVKQCKDYYEILGVS K G Y V K R 3 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 0 11 0 1135.5873 Q9NXW2 Q9NXW2 93 103 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0048775 98.04 By MS/MS 7 0 1 1 867600 867600 0 5662 2630 5848 13879 11387 11387 0 13620 0 GYTAEQVAAVKR DAPSANGEAGGESTKGYTAEQVAAVKRVKQ STKGYTAEQVAAVKRVKQCKDYYEILGVSR K G Y K R V 3 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 0 12 1 1291.6884 Q9NXW2 Q9NXW2 93 104 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 6.9222E-12 235.66 By MS/MS 7 0 1 1 695460 695460 0 5663 2630 5849 13880 11388 11388 1 10918 0 GYTLVEYETYK KNIHLNLDRRTGYLKGYTLVEYETYKEAQA GYLKGYTLVEYETYKEAQAAMEGLNGQDLM K G Y Y K E 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 2 0 3 1 0 0 11 0 1364.65 Q9Y5S9 Q9Y5S9 115 125 RBM8A RNA-binding protein 8A yes yes 2 0.012509 96.034 By MS/MS 9 0 1 1 204160 204160 0 5664 2922 5850 13881 11389 11389 0 4017.8 0 GYVFQMEMIVR RKEVLEKLIEKCVSKGYVFQMEMIVRARQL CVSKGYVFQMEMIVRARQLNYTIGEVPISF K G Y V R A 0 1 0 0 0 1 1 1 0 1 0 0 2 1 0 0 0 0 1 2 0 0 11 0 1371.6679 O60762 O60762 206 216 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.00048125 121.6 By MS/MS 8 0 1 1 900570 900570 0 5665 275 5851 13882 11390 11390 119;120 1 11370 0 GYYSPGIVSTR VKPAQASHTNYLLMRGYYSPGIVSTRNLNP LLMRGYYSPGIVSTRNLNPNDSIVVNSCQM R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.01419 88.681 By MS/MS 2 0 1 1 894080 894080 0 5666 1328 5852 13883 11391 11391 1 302410 0 HAAEGEIYTK HTTRLYGLSTFKDARHAAEGEIYTKLNQKI FKDARHAAEGEIYTKLNQKIDEFVQLADYD R H A T K L 2 0 0 0 0 0 2 1 1 1 0 1 0 0 0 0 1 0 1 0 0 0 10 0 1117.5404 Q8TAG9 Q8TAG9 595 604 EXOC6 Exocyst complex component 6 yes yes 2 0.0063497 111.46 By MS/MS 4 0 1 1 0 0 0 5667 1975 5853 13884 11392 11392 1 0 0 HAAVLVLR RALEWLGADRNEGRRHAAVLVLRELAISVP DRNEGRRHAAVLVLRELAISVPTFFFQQVQ R H A L R E 2 1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 877.54977 P42345 P42345 166 173 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0066826 117.7 By MS/MS 2 0 1 1 477250 477250 0 5668 879 5854 13885 11393 11393 1 161430 0 HADDDRPPR RPPRRIADEDRGNWRHADDDRPPRRGLDED DRGNWRHADDDRPPRRGLDEDRGSWRTADE R H A P R R 1 2 0 3 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 9 1 1077.4952 Q14152 Q14152 1011 1019 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 9.5672E-10 209.84 By MS/MS 3 0.816 1 1 1 3 595050 595050 0 5669 1422 5855 13886;13887;13888 11394;11395 11395 2 46092 0 HADIVTTTTHK ISGLVAAKVIPSPFKHADIVTTTTHKTLRG SPFKHADIVTTTTHKTLRGARSGLIFYRKG K H A H K T 1 0 0 1 0 0 0 0 2 1 0 1 0 0 0 0 4 0 0 1 0 0 11 0 1222.6306 P34897 P34897 270 280 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2;3 0.00026942 137.05 By MS/MS By matching 6.25 0.433 3 1 3 1 6069400 6053400 16059 5670 809 5856 13889;13890;13891;13892 11396;11397 11397 2 44167 16456 HADVGVALLANAPER TLMCGDGTNDVGALKHADVGVALLANAPER HADVGVALLANAPERVVERRRRPRDSPTLS K H A E R V 4 1 1 1 0 0 1 1 1 0 2 0 0 0 1 0 0 0 0 2 0 0 15 0 1531.8107 Q9HD20 Q9HD20 874 888 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0062679 99.844 By MS/MS 1 0 1 1 67523 67523 0 5671 2517 5857 13893 11398 11398 1 16271 0 HAEAQAAAR LLAAAAAAAVRVCARHAEAQAAARQELALK VRVCARHAEAQAAARQELALKTLGTDGLFL R H A A R Q 5 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 923.45733 Q9NZV5 Q9NZV5 52 60 SEPN1 Selenoprotein N yes yes 2 0.053263 76.1 By MS/MS 5 0 1 1 208140 208140 0 5672 2656 5858 13894 11399 11399 1 2087.5 0 HAEATLGSGNLR KKNIPEGSHQYELLKHAEATLGSGNLRQAV LLKHAEATLGSGNLRQAVMLPEGEDLNEWI K H A L R Q 2 1 1 0 0 0 1 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1224.6211 Q9H8S9;Q7L9L4 Q9H8S9 31 42 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 2 7.0858E-05 160.91 By MS/MS 8.5 0.5 1 1 2 991520 991520 0 5673 1772 5859 13895;13896 11400 11400 1 17083 0 HAEELERLCESNRVDAK RKRFHLLSRLRKAVKHAEELERLCESNRVD EELERLCESNRVDAKTKLEAQAYTAYLSGM K H A A K T 2 2 1 1 1 0 4 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 17 2 2054.9804 Q9UHB9 Q9UHB9 165 181 SRP68 Signal recognition particle subunit SRP68 yes yes 3 0.030104 70.26 By MS/MS 5 0 1 1 793330 793330 0 5674 2728 5860 13897 11401 11401 1 7956.7 0 HAEKAPTNIVYK GNVEISQVTIVGIIRHAEKAPTNIVYKIDD IIRHAEKAPTNIVYKIDDMTAAPMDVRQWV R H A Y K I 2 0 1 0 0 0 1 0 1 1 0 2 0 0 1 0 1 0 1 1 0 0 12 1 1369.7354 P15927 P15927 82 93 RPA2 Replication protein A 32 kDa subunit yes yes 3 0.0057442 119.74 By MS/MS 8 0 1 1 1793500 1793500 0 5675 629 5861 13898 11402 11402 1 22643 0 HAELIASTFVDQCK SDEPLTKDDIPVFLRHAELIASTFVDQCKT RHAELIASTFVDQCKTVLKLASEEPPDDEE R H A C K T 2 0 0 1 1 1 1 0 1 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1617.7821 Q9UBB4 Q9UBB4 271 284 ATXN10 Ataxin-10 yes yes 2;3 0.00037608 196.27 By MS/MS 6.67 0.471 1 2 3 4497800 4497800 0 5676 2693 5862 13899;13900;13901 11403;11404 11403 2 65408 0 HAGGGVHIEPR FRSGCARTAGDGGVRHAGGGVHIEPRYRQF GGVRHAGGGVHIEPRYRQFPQLTRSQVFQS R H A P R Y 1 1 0 0 0 0 1 3 2 1 0 0 0 0 1 0 0 0 0 1 0 0 11 0 1128.5788 O95178 O95178 33 43 NDUFB2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial yes yes 3 0.039894 93.556 By MS/MS 10 0 1 1 422750 422750 0 5677 391 5863 13902 11405 11405 1 22785 0 HAIPIIK NIELTRYTRPTPVQKHAIPIIKEKRDLMAC TRPTPVQKHAIPIIKEKRDLMACAQTGSGK K H A I K E 1 0 0 0 0 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 0 7 0 790.50651 O00571;O15523 O00571 209 215 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.029073 105.42 By MS/MS 5.5 1.12 1 1 1 1 4 18201000 18201000 0 5678 116 5864 13903;13904;13905;13906 11406;11407;11408 11408 3 195760 0 HAIPNLVK RNLAVDARNKELIGKHAIPNLVKNLPGGQQ NKELIGKHAIPNLVKNLPGGQQNSSWNFSE K H A V K N 1 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 1 0 0 8 0 890.53379 O60716 O60716 750 757 CTNND1 Catenin delta-1 yes yes 2 0.0074407 114.19 By MS/MS 4 0 1 1 2948000 2948000 0 5679 272 5865 13907 11409 11409 1 277420 0 HAIVICNR VIWSADMSHVALLAKHAIVICNRKLDALCN HVALLAKHAIVICNRKLDALCNIHENIRVK K H A N R K 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 981.51782 P53621 P53621 509 516 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0042834 128.82 By MS/MS 3 1.41 1 1 1 1 1 5 4666300 4666300 0 5680 1034 5866 13908;13909;13910;13911;13912 11410;11411 11411 2 407100 0 HALIIYDDLSK YSGCSMGEYFRDNGKHALIIYDDLSKQAVA DNGKHALIIYDDLSKQAVAYRQMSLLLRRP K H A S K Q 1 0 0 2 0 0 0 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1286.6871 P25705 P25705 306 316 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00034345 134.68 By MS/MS By MS/MS 6.2 0.4 4 1 4 1 126470000 126290000 178550 5681 723 5867 13913;13914;13915;13916;13917 11412;11413;11414;11415;11416;11417 11414 6 913940 182960 HASHISK ILLGEVALGNMYELKHASHISKLPKGKHSV LGNMYELKHASHISKLPKGKHSVKGLGKTT K H A S K L 1 0 0 0 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 7 0 778.40859 P09874 P09874 934 940 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.010617 133.81 By MS/MS 4 0 1 1 579010 579010 0 5682 543 5868 13918 11418 11418 1 54488 0 HASLQNSQR GERMLSTFKELFSEKHASLQNSQRTVAEVQ ELFSEKHASLQNSQRTVAEVQETLAEMIRQ K H A Q R T 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1039.5159 Q8TEQ6 Q8TEQ6 1364 1372 GEMIN5 Gem-associated protein 5 yes yes 2 6.1428E-05 169.44 By MS/MS 4.5 1.12 1 1 1 1 4 815380 815380 0 5683 2002 5869 13919;13920;13921;13922 11419;11420 11419 2 30378 0 HASPEDIKK ______________________________ VLGVQRHASPEDIKKAYRKLALKWHPDKNP R H A K K A 1 0 0 1 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 9 1 1023.5349 O75190 O75190 13 21 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 3 0.0072342 99.815 By MS/MS 8 0 1 1 525970 525970 0 5684 305 5870 13923 11421 11421 1 6640.4 0 HASPILPITEFSDIPR SNESLVVNRVTGNFKHASPILPITEFSDIP ASPILPITEFSDIPRRAPKKPLTRAEVGEK K H A P R R 1 1 0 1 0 0 1 0 1 3 1 0 0 1 3 2 1 0 0 0 0 0 16 0 1791.9519 P42167 P42167 304 319 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2;3 0.00051317 152.4 By MS/MS 6 0 2 2 5212600 5212600 0 5685 876 5871 13924;13925 11422;11423 11423 2 35832 0 HAVDGAVKK VQCLLLLEVLGGSHKHAVDGAVKKLTKLWK LGGSHKHAVDGAVKKLTKLWKENPGLVEQY K H A K K L 2 0 0 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 9 1 923.51886 Q92616 Q92616 160 168 GCN1L1 Translational activator GCN1 yes yes 2;3 0.0069288 136.8 By MS/MS 2 0 2 2 88080 88080 0 5686 2064 5872 13926;13927 11424;11425 11424 2 29792 0 HAVSDPSILDSLDLNEDER DKYKRPGYGAYDAFKHAVSDPSILDSLDLN DPSILDSLDLNEDEREVLINNINRRLTPQA K H A E R E 1 1 1 4 0 0 2 0 1 1 3 0 0 0 1 3 0 0 0 1 0 0 19 0 2123.9971 P05198 P05198 155 173 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 3 2.2601E-06 202.18 By MS/MS 7 0 1 1 566160 566160 0 5687 489 5873 13928 11426 11426 1 8887.8 0 HAVSEGTK IQTAVRLLLPGELAKHAVSEGTKAVTKYTS LPGELAKHAVSEGTKAVTKYTSSK______ K H A T K A 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 8 0 827.41373 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q96A08;A0A2R8Y619 Q99880 110 117 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B type 1-A yes no 2 0.002011 143.11 By MS/MS 10 0 1 1 1132500 1132500 0 5688 279 5874 13929 11427 11427 1 61037 0 HAVVVGR CLELIKETGVPIAGRHAVVVGRSKIVGAPM TGVPIAGRHAVVVGRSKIVGAPMHDLLLWN R H A G R S 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 3 0 0 7 0 736.43441 P11586 P11586 167 173 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.04831 90.939 By MS/MS By matching 4 0 2 1 1 8114500 8089900 24602 5689 582 5875 13930;13931 11428 11428 1 761320 52420 HCDLQVR VDAFQLERAIVDAARHCDLQVRIDHTSRTL RAIVDAARHCDLQVRIDHTSRTLSFGSDLN R H C V R I 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 926.43923 Q14152 Q14152 477 483 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0092414 138.24 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 130250000 130250000 0 5690 1422 5876 13932;13933;13934;13935;13936;13937 11429;11430;11431;11432 11430 4 4469700 0 HCNGVDWR VSFINIKTLNEWDSRHCNGVDWRQKLDSQR LNEWDSRHCNGVDWRQKLDSQRGAVIATEL R H C W R Q 0 1 1 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 8 0 1042.4403 O15371 O15371 403 410 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.0076078 113.41 By MS/MS 5 0 1 1 3792800 3792800 0 5691 185 5877 13938 11433 11433 1 38040 0 HCSQVDSVR DKSAVGHEYQSKLSKHCSQVDSVRGFGGKF QSKLSKHCSQVDSVRGFGGKFGVQMDRVDQ K H C V R G 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 2 0 0 0 2 0 0 9 0 1086.4876 Q14247 Q14247 111 119 CTTN Src substrate cortactin yes yes 2 0.00061947 143.04 By MS/MS 3.5 1.12 1 1 1 1 4 2208700 2208700 0 5692 1435 5878 13939;13940;13941;13942 11434 11434 1 69898 0 HCSSSIGTIR EETEQCADLCLRLLRHCSSSIGTIRSHASA LRLLRHCSSSIGTIRSHASASLYLLMRQNF R H C I R S 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 3 1 0 0 0 0 0 10 0 1116.5346 Q96N67 Q96N67 1560 1569 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.017182 88.177 By MS/MS 3 1.41 1 1 1 1 1 5 4917200 4917200 0 5693 2201 5879 13943;13944;13945;13946;13947 11435 11435 1 1203200 0 HCTASTLPK TIKQQTSLFIARSFRHCTASTLPKSLLKPF IARSFRHCTASTLPKSLLKPFCAALLKHIN R H C P K S 1 0 0 0 1 0 0 0 1 0 1 1 0 0 1 1 2 0 0 0 0 0 9 0 1013.4964 Q14008 Q14008 426 434 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.006263 107.01 By MS/MS 2.5 0.5 1 1 2 1958500 1958500 0 5694 1417 5880 13948;13949 11436;11437 11436 2 662440 0 HDAATCFVDAGNAFK AFCQAAQLHLQLQSKHDAATCFVDAGNAFK HDAATCFVDAGNAFKKADPQEAINCLMRAI K H D F K K 4 0 1 2 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 1 0 0 15 0 1622.7147 P54920 P54920 79 93 NAPA Alpha-soluble NSF attachment protein yes yes 2 6.1529E-24 282.21 By MS/MS 8 0 1 1 1523900 1523900 0 5695 1049 5881 13950 11438 11438 1 19240 0 HDADGQATLLNLLLR VRSFLHARLRTATLRHDADGQATLLNLLLR HDADGQATLLNLLLRNYLHYSLYDQAEKLV R H D L R N 2 1 1 2 0 1 0 1 1 0 5 0 0 0 0 0 1 0 0 0 0 0 15 0 1648.8897 O43242 O43242 242 256 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2;3 3.7074E-17 314.35 By MS/MS 6 0 4 4 1517600 1517600 0 5696 198 5882 13951;13952;13953;13954 11439;11440;11441;11442;11443 11440 5 10432 0 HDAETNITTEK SRSHAVFNIIFTQKRHDAETNITTEKVSKI TQKRHDAETNITTEKVSKISLVDLAGSERA R H D E K V 1 0 1 1 0 0 2 0 1 1 0 1 0 0 0 0 3 0 0 0 0 0 11 0 1257.5837 Q12756 Q12756 230 240 KIF1A Kinesin-like protein KIF1A yes yes 2 1.019E-06 190.57 By MS/MS 1.5 0.5 1 1 2 403250 403250 0 5697 1324 5883 13955;13956 11444 11444 1 133530 0 HDEAFSTEPLK AEYADIFCQFNFIHRHDEAFSTEPLKNTGR FIHRHDEAFSTEPLKNTGRGPPLGFYHVQN R H D L K N 1 0 0 1 0 0 2 0 1 0 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1272.5986 Q12756 Q12756 1029 1039 KIF1A Kinesin-like protein KIF1A no no 2 0.048874 70.552 By MS/MS 2 0 1 1 248510 248510 0 5698 1324 5884 13957 11445 11445 1 84055 0 HDKVEDALNLK MVTGGYAALINLCCRHDKVEDALNLKEEFD LCCRHDKVEDALNLKEEFDRLDSSAVLDTG R H D L K E 1 0 1 2 0 0 1 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 11 1 1280.6725 P42704 P42704 724 734 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.00040132 128.88 By MS/MS 3.75 0.829 2 1 1 4 2278500 2278500 0 5699 886 5885 13958;13959;13960;13961 11446;11447 11446 2 70764 0 HDSPEDVKR AADGYQRCMMAQYNRHDSPEDVKRRAMADP MAQYNRHDSPEDVKRRAMADPEVQQIMSDP R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 P31948 P31948 479 487 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.033374 85.862 By MS/MS By matching 4 0.816 1 1 1 2 1 802440 317870 484570 5700 795 5886 13962;13963;13964 11448 11448 1 13928 61679 HDSSTAVAGSPR AEARRMAFLAKKGYRHDSSTAVAGSPRGHG GYRHDSSTAVAGSPRGHGQSRETTQERRKK R H D P R G 2 1 0 1 0 0 0 1 1 0 0 0 0 0 1 3 1 0 0 1 0 0 12 0 1183.5582 Q9H1I8 Q9H1I8 704 715 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.00083617 155.26 By MS/MS 4 0 1 1 650480 650480 0 5701 2422 5887 13965 11449 11449 1 61214 0 HDVTCTVSGGGR EQLMFPFHFVDRLGKHDVTCTVSGGGRSAQ LGKHDVTCTVSGGGRSAQAGAIRLAMAKAL K H D G R S 0 1 0 1 1 0 0 3 1 0 0 0 0 0 0 1 2 0 0 2 0 0 12 0 1244.5568 P82933 P82933 326 337 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 4.0199E-06 228.98 By MS/MS 7.5 0.5 1 1 2 6958900 6958900 0 5702 1239 5888 13966;13967 11450 11450 1 107990 0 HEADSSPR TVVDSEGRTETTVTRHEADSSPRGDPESPR TETTVTRHEADSSPRGDPESPRPPALDDAF R H E P R G 1 1 0 1 0 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 8 0 897.39406 O00165 O00165 243 250 HAX1 HCLS1-associated protein X-1 yes yes 2 0.0076078 113.41 By MS/MS 7 0 1 1 330730 330730 0 5703 86 5889 13968 11451 11451 1 5191.9 0 HEANNPQLK NRFEEAKRTYEEGLKHEANNPQLKEGLQNM YEEGLKHEANNPQLKEGLQNMEARLAERKF K H E L K E 1 0 2 0 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 9 0 1049.5254 P31948 P31948 101 109 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.0020347 120.87 By MS/MS 5 0 1 1 322870 322870 0 5704 795 5890 13969 11452 11452 1 3238.2 0 HEDQLEVTR SARIAKMSLSPSSPRHEDQLEVTREPARRL SPSSPRHEDQLEVTREPARRLFLFGEEPSK R H E T R E 0 1 0 1 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1125.5415 Q86XL3 Q86XL3 810 818 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.00011249 159.79 By MS/MS 3.5 0.5 1 1 2 939320 939320 0 5705 1845 5891 13970;13971 11453 11453 1 83978 0 HEELMLGDPCLK GKDEDFKQYVNKNSKHEELMLGDPCLKDLK NSKHEELMLGDPCLKDLKKGDIIQLQRRGF K H E L K D 0 0 0 1 1 0 2 1 1 0 3 1 1 0 1 0 0 0 0 0 0 0 12 0 1440.6741 P07814 P07814 651 662 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0080644 94.616 By MS/MS 3 0 1 1 176640 176640 0 5706 512 5892 13972 11454 11454 1 3231.9 0 HEFQAETK SIISSTESVQGSTSKHEFQAETKKLLDIVA VQGSTSKHEFQAETKKLLDIVARSLYSEKE K H E T K K 1 0 0 0 0 1 2 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 988.46141 Q12931 Q12931 88 95 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.033356 88.819 By MS/MS 5 0 1 1 844370 844370 0 5707 1340 5893 13973 11455 11455 1 8468.6 0 HEGLGAFYK GQYSGIYDCAKKILKHEGLGAFYKGYVPNL AKKILKHEGLGAFYKGYVPNLLGIIPYAGI K H E Y K G 1 0 0 0 0 0 1 2 1 0 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1020.5029 Q6NUK1 Q6NUK1 337 345 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.015228 95.815 By MS/MS 7 0 1 1 2737300 2737300 0 5708 1687 5894 13974 11456 11456 1 42971 0 HEGPSAFLK DTYSGILDCARKILRHEGPSAFLKGAYCRA ARKILRHEGPSAFLKGAYCRALVIAPLFGI R H E L K G 1 0 0 0 0 0 1 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 9 0 984.50288 Q9H936 Q9H936 278 286 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 0.002202 118.74 By MS/MS 8 0 1 1 3660200 3660200 0 5709 2480 5895 13975 11457 11457 1 46210 0 HEILLSQSVR LVTSGAVAFGKQRLRHEILLSQSVRQALHS KQRLRHEILLSQSVRQALHSGQNQLKEMAI R H E V R Q 0 1 0 0 0 1 1 0 1 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1180.6564 P54886 P54886 129 138 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.042537 72.434 By MS/MS 5 0 1 1 689130 689130 0 5710 1048 5896 13976 11458 11458 1 6911.6 0 HEISEMNR QQTAGRHGDDLRNTKHEISEMNRMIQRLRA DDLRNTKHEISEMNRMIQRLRAEIDNVKKQ K H E N R M 0 1 1 0 0 0 2 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 8 0 1014.4553 CON__P13647;P13647;CON__Q922U2 CON__P13647 384 391 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.042627 84.743 By MS/MS 4 0 1 1 1945200 1945200 0 + 5711 52;74 5897 13977 11459 11459 40 1 183060 0 HEKEDGAISTIVLR VYLSEVGDTQVVVFKHEKEDGAISTIVLRG KHEKEDGAISTIVLRGSTDNLMDDIERAVD K H E L R G 1 1 0 1 0 0 2 1 1 2 1 1 0 0 0 1 1 0 0 1 0 0 14 1 1566.8366 P50990 P50990 365 378 CCT8 T-complex protein 1 subunit theta yes yes 2;3 1.6766E-06 205.31 By MS/MS 6 0 2 2 4110000 4110000 0 5712 984 5898 13978;13979 11460;11461 11460 2 28253 0 HELAEIVFK VLLRALPVPRAKHVKHELAEIVFKVGKVID RAKHVKHELAEIVFKVGKVIDPVTGKPCAG K H E F K V 1 0 0 0 0 0 2 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1084.5917 Q9Y2R5 Q9Y2R5 79 87 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 0.0012322 131.06 By MS/MS 9.5 0.5 1 1 2 4925900 4925900 0 5713 2840 5899 13980;13981 11462;11463 11463 2 235260 0 HELLNSTR RILLAKERIRFVIKKHELLNSTREDLQLDK IRFVIKKHELLNSTREDLQLDKPASGVKEE K H E T R E 0 1 1 0 0 0 1 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 8 0 968.50394 P78347 P78347 436 443 GTF2I General transcription factor II-I yes yes 2 0.021809 97.635 By MS/MS 3.5 0.5 1 1 2 1268200 1268200 0 5714 1221 5900 13982;13983 11464 11464 1 49552 0 HELLSLASSNHLGK VLMWELEKKSAVADKHELLSLASSNHLGKN KHELLSLASSNHLGKNLQLLMDRVDEMSQD K H E G K N 1 0 1 0 0 0 1 1 2 0 4 1 0 0 0 3 0 0 0 0 0 0 14 0 1504.7998 O15372 O15372 228 241 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 3 6.7026E-06 169.58 By MS/MS 7 0 1 1 0 0 0 5715 186 5901 13984 11465 11465 1 0 0 HEQEYMEVR EEMINELAVAMTAVKHEQEYMEVRERIHRA AMTAVKHEQEYMEVRERIHRAINDNTNSRV K H E V R E 0 1 0 0 0 1 3 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 9 0 1219.5292 Q15363 Q15363 146 154 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 2 7.784E-05 166.34 By MS/MS 9 0 1 1 571910 571910 0 5716 1499 5902 13985 11466 11466 1 11255 0 HEQILVLDPPTDLK ______________________________ KHEQILVLDPPTDLKFKGPFTDVVTTNLKL K H E L K F 0 0 0 2 0 1 1 0 1 1 3 1 0 0 2 0 1 0 0 1 0 0 14 0 1616.8774 Q9P0L0 Q9P0L0 11 24 VAPA Vesicle-associated membrane protein-associated protein A yes yes 2;3 0.00024826 202.61 By MS/MS 8 0 2 2 1814200 1814200 0 5717 2665 5903 13986;13987 11467;11468 11468 2 22904 0 HETLTSLNLEK GCIFMVIEGKKAAQRHETLTSLNLEKKARL AAQRHETLTSLNLEKKARLKEEAAMKAKTE R H E E K K 0 0 1 0 0 0 2 0 1 0 3 1 0 0 0 1 2 0 0 0 0 0 11 0 1283.6721 Q96A26 Q96A26 129 139 FAM162A Protein FAM162A yes yes 2 3.7161E-09 210.08 By MS/MS 9.5 0.5 1 1 2 5317900 5317900 0 5718 2100 5904 13988;13989 11469 11469 1 202340 0 HETLTSLNLEKK GCIFMVIEGKKAAQRHETLTSLNLEKKARL AQRHETLTSLNLEKKARLKEEAAMKAKTE_ R H E K K A 0 0 1 0 0 0 2 0 1 0 3 2 0 0 0 1 2 0 0 0 0 0 12 1 1411.7671 Q96A26 Q96A26 129 140 FAM162A Protein FAM162A yes yes 3 4.0297E-05 163.45 By MS/MS 9.5 0.5 1 1 2 580490 580490 0 5719 2100 5905 13990;13991 11470 11470 1 23132 0 HEVLLISAEQDKR QIKITGTKEGIEKARHEVLLISAEQDKRAV ARHEVLLISAEQDKRAVERLEVEKAFHPFI R H E K R A 1 1 0 1 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 13 1 1536.826 Q00341 Q00341 210 222 HDLBP Vigilin yes yes 3 0.0019316 142.38 By MS/MS 3.5 0.5 1 1 2 2853400 2853400 0 5720 1260 5906 13992;13993 11471 11471 1 116600 0 HEVSGETVVFQGGALGK VSTLVETLMTGKRVKHEVSGETVVFQGGAL VSGETVVFQGGALGKTPDGQGLSTYKELCS K H E G K T 1 0 0 0 0 1 2 4 1 0 1 1 0 1 0 1 1 0 0 3 0 0 17 0 1713.8686 Q5VYK3 Q5VYK3 1040 1056 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 0.0002253 139.77 By MS/MS 2 0 1 1 259560 259560 0 5721 1656 5907 13994 11472 11472 1 87793 0 HFDETVNR EQVLTLVNKRIGLYRHFDETVNRYKQSRDI KRIGLYRHFDETVNRYKQSRDISTLNSGKK R H F N R Y 0 1 1 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 1016.4676 P04843 P04843 495 502 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0019304 143.89 By MS/MS By MS/MS 7.14 1.81 2 1 1 1 1 1 6 1 39014000 38664000 350560 5722 478 5908 13995;13996;13997;13998;13999;14000;14001 11473;11474 11474 2 408620 294390 HFDSQVIIYGK PQISKVANHMDGFQRHFDSQVIIYGKQVII GFQRHFDSQVIIYGKQVIINLINQKGSEKP R H F G K Q 0 0 0 1 0 1 0 1 1 2 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1305.6717 Q9NTJ5 Q9NTJ5 291 301 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 2.2865E-05 142.98 By MS/MS 3 2.16 1 1 1 3 3352700 3352700 0 5723 2576 5909 14002;14003;14004 11475;11476;11477 11475 3 194920 0 HFEATDILVSK KIEPIPGESPKMFGRHFEATDILVSKISRQ MFGRHFEATDILVSKISRQSIDALKDWFRD R H F S K I 1 0 0 1 0 0 1 0 1 1 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1258.6558 O60841 O60841 1175 1185 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 2.6192E-06 180.09 By MS/MS 2 0.816 1 1 1 3 2375600 2375600 0 5724 283 5910 14005;14006;14007 11478;11479 11478 2 505740 0 HFELGGDK PNCRSKRMLAIKRCKHFELGGDKKRKGQVI LAIKRCKHFELGGDKKRKGQVIQF______ K H F D K K 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 901.42938 P83881 P83881 90 97 RPL36A 60S ribosomal protein L36a no no 2 0.023448 95.815 By MS/MS 9.5 0.5 1 1 2 1631000 1631000 0 5725 1242 5911 14008;14009 11480 11480 1 76681 0 HFELGGDKK PNCRSKRMLAIKRCKHFELGGDKKRKGQVI AIKRCKHFELGGDKKRKGQVIQF_______ K H F K K R 0 0 0 1 0 0 1 2 1 0 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1029.5243 P83881 P83881 90 98 RPL36A 60S ribosomal protein L36a no no 3 0.027088 77.533 By MS/MS 9.5 0.5 1 1 2 452650 452650 0 5726 1242 5912 14010;14011 11481 11481 1 22137 0 HFEQAIER ALIAARHLSDSINQKHFEQAIERVIGGLEK SDSINQKHFEQAIERVIGGLEKKTQVLQPE K H F E R V 1 1 0 0 0 1 2 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 8 0 1028.5039 Q9Y4W6 Q9Y4W6 544 551 AFG3L2 AFG3-like protein 2 yes yes 2 0.00035445 162.49 By MS/MS 6 0.816 1 1 1 3 9961800 9961800 0 5727 2902 5913 14012;14013;14014 11482 11482 1 84230 0 HFLPEMLSK ANEAVNGVREMRAPKHFLPEMLSKVIILSL EMRAPKHFLPEMLSKVIILSLDRSDEDKEK K H F S K V 0 0 0 0 0 0 1 0 1 0 2 1 1 1 1 1 0 0 0 0 0 0 9 0 1100.5689 P78344 P78344 576 584 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0027047 113.26 By MS/MS 4.5 0.5 1 1 2 2506200 2506200 0 5728 1219 5914 14015;14016 11483;11484 11483 2 172970 0 HFNAPSHIR FNPFVTSDRSKNRKRHFNAPSHIRRKIMSS SKNRKRHFNAPSHIRRKIMSSPLSKELRQK R H F I R R 1 1 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1077.5468 P61254 P61254 18 26 RPL26 60S ribosomal protein L26 yes yes 3 0.0006099 147.4 By MS/MS 8.5 0.5 1 1 2 6197000 6197000 0 5729 1119 5915 14017;14018 11485 11485 1 114290 0 HFNAPSHVR FNPFVTSDRSKNRKRHFNAPSHVRRKIMSS SKNRKRHFNAPSHVRRKIMSSPLSKELRQK R H F V R R 1 1 1 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1063.5312 Q9UNX3 Q9UNX3 18 26 RPL26L1 60S ribosomal protein L26-like 1 yes yes 3 0.0007176 128.6 By MS/MS 9 0 1 1 424280 424280 0 5730 2794 5916 14019 11486 11486 1 8349.8 0 HFQQQLVNK SLSVLMVNISSLISRHFQQQLVNKTELLFD SSLISRHFQQQLVNKTELLFDTIDSSEVNV R H F N K T 0 0 1 0 0 3 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1140.604 Q53R41 Q53R41 207 215 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 7.9361E-05 166.05 By MS/MS 5 0 1 1 799700 799700 0 5731 1591 5917 14020 11487 11487 1 8020.6 0 HFRPELEER ALGDGAAWPVQGLIRHFRPELEERMQRFAQ VQGLIRHFRPELEERMQRFAQQHQARQAAS R H F E R M 0 2 0 0 0 0 3 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 9 1 1211.6047 P49821 P49821 441 449 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 3 0.020434 143.03 By MS/MS 7 0 1 1 0 0 0 5732 966 5918 14021 11488 11488 1 0 0 HFSAADASR PPPQVWQLISKVLARHFSAADASRVLEQLQ SKVLARHFSAADASRVLEQLQRDYERSLSR R H F S R V 3 1 0 1 0 0 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 0 9 0 960.44134 P11441 P11441 106 114 UBL4A Ubiquitin-like protein 4A yes yes 2 0.0019318 122.18 By MS/MS 9.5 0.5 1 1 2 929810 929810 0 5733 579 5919 14022;14023 11489 11489 1 34627 0 HFSGLEEAVYR PKAPGFAQMLKEGAKHFSGLEEAVYRNIQA EGAKHFSGLEEAVYRNIQACKELAQTTRTA K H F Y R N 1 1 0 0 0 0 2 1 1 0 1 0 0 1 0 1 0 0 1 1 0 0 11 0 1306.6306 P50990 P50990 21 31 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.00011227 150.81 By MS/MS 6.56 1.77 1 1 4 1 1 1 9 136920000 136920000 0 5734 984 5920 14024;14025;14026;14027;14028;14029;14030;14031;14032 11490;11491;11492;11493;11494;11495;11496;11497;11498;11499 11491 10 1051600 0 HGAGSGQSLSHGR GHRGSGSSQSSGYGRHGAGSGQSLSHGRHG GRHGAGSGQSLSHGRHGSGSGQSSSYGQHG R H G G R H 1 1 0 0 0 1 0 4 2 0 1 0 0 0 0 3 0 0 0 0 0 0 13 0 1249.5912 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 2762 2774 HRNR Hornerin yes no 2;3 6.6752E-21 248.98 By matching By MS/MS 3.5 1.8 2 2 2 3 1 1 1 1 11 1908700 93847 1814900 + 5735 73 5921 14033;14034;14035;14036;14037;14038;14039;14040;14041;14042;14043;14044 11500;11501;11502;11503;11504;11505;11506;11507 11503 8 8831.7 848550 HGDDLRNTK WYQTKYEELQQTAGRHGDDLRNTKHEISEM QQTAGRHGDDLRNTKHEISEMNRMIQRLRA R H G T K H 0 1 1 2 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1054.5156 CON__P13647;P13647;CON__REFSEQ:XP_932229;CON__Q922U2;CON__P02538;P02538;CON__O95678;O95678;CON__P04259;CON__P48668;P48668;CON__P12035;P12035 CON__P13647 375 383 KRT5;KRT6A;KRT75;KRT6C;KRT3 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3 no no 2 2.9267E-08 190.26 By matching By MS/MS 5.14 2.42 1 1 1 1 2 1 1 6 1333300 313160 1020100 + 5736 52;44;56;40;74;48 5922 14045;14046;14047;14048;14049;14050;14051 11508;11509 11508 2 2152.7 383230 HGDLPDIQIK KMKQDAQVVLYRSYRHGDLPDIQIKHSSLI YRSYRHGDLPDIQIKHSSLITPLQAVAQRD R H G I K H 0 0 0 2 0 1 0 1 1 2 1 1 0 0 1 0 0 0 0 0 0 0 10 0 1134.6033 P78527 P78527 2777 2786 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.494E-05 164.68 By MS/MS 2.5 1.12 1 1 1 1 4 10323000 10323000 0 5737 1225 5923 14052;14053;14054;14055 11510;11511;11512;11513;11514;11515 11511 6 2682800 0 HGDNLRDTK WYQTKYEELQVTAGKHGDNLRDTKNEIAEL QVTAGKHGDNLRDTKNEIAELTRTIQRLQG K H G T K N 0 1 1 2 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1054.5156 CON__Q5XKE5;Q5XKE5 CON__Q5XKE5 351 359 KRT79 Keratin, type II cytoskeletal 79 yes no 3 0.089405 87.639 By MS/MS 3 0 1 1 0 0 0 + 5738 68 5924 14056 11516 11516 1 0 0 HGDNREHPNEQ VAHPSQAPSPNQPTKHGDNREHPNEQ____ QPTKHGDNREHPNEQ_______________ K H G E Q - 0 1 2 1 0 1 2 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 11 1 1331.5603 P56545 P56545 435 445 CTBP2 C-terminal-binding protein 2 yes yes 2 0.0051227 120.86 By MS/MS 7 0 1 1 46349 46349 0 5739 1073 5925 14057 11517 11517 1 727.59 0 HGDPGDAAQQEAK LEALRRQRLAELQAKHGDPGDAAQQEAKHR AKHGDPGDAAQQEAKHREAEMRNSILAQVL K H G A K H 3 0 0 2 0 2 1 2 1 0 0 1 0 0 1 0 0 0 0 0 0 0 13 0 1322.5851 O14737 O14737 21 33 PDCD5 Programmed cell death protein 5 yes yes 2;3 0.00034588 147.58 By MS/MS 10 0 2 2 2226800 2226800 0 5740 136 5926 14058;14059 11518;11519 11518 2 120020 0 HGDSLKEIK LYHSKYEELQVTVGRHGDSLKEIKIEISEL QVTVGRHGDSLKEIKIEISELNRVIQRLQG R H G I K I 0 0 0 1 0 0 1 1 1 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1025.5506 CON__P35908v2;CON__P35908;P35908;CON__Q3TTY5 CON__P35908v2 385 393 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 3 5.0094E-05 166.09 By MS/MS By MS/MS 4.2 2.43 2 2 3 2 2 1 2 1 7 8 20023000 8095100 11927000 + 5741 55;65 5927 14060;14061;14062;14063;14064;14065;14066;14067;14068;14069;14070;14071;14072;14073;14074 11520;11521;11522;11523;11524;11525;11526;11527;11528;11529;11530;11531;11532;11533 11531 11 759600 4558800 HGDSVRNSK LYQSKYEELQITAGRHGDSVRNSKIEISEL QITAGRHGDSVRNSKIEISELNRVIQRLRS R H G S K I 0 1 1 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 1 0 0 9 1 998.48936 CON__P04264;P04264 P04264 387 395 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.00031885 138.06 By MS/MS By MS/MS 4.79 2.26 1 2 3 3 4 2 1 2 1 6 13 2302600 346720 1955900 + 5742 471;45 5928 14075;14076;14077;14078;14079;14080;14081;14082;14083;14084;14085;14086;14087;14088;14089;14090;14091;14092;14093 11534;11535;11536;11537;11538;11539;11540;11541;11542;11543;11544;11545 11534 12 8588 1477300 HGEIDYEAIVK ARLDILKIHAGPITKHGEIDYEAIVKLSDG PITKHGEIDYEAIVKLSDGFNGADLRNVCT K H G V K L 1 0 0 1 0 0 2 1 1 2 0 1 0 0 0 0 0 0 1 1 0 0 11 0 1272.635 P62333 P62333 323 333 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.00016829 145.9 By MS/MS By matching 8.25 1.3 2 1 1 3 1 12971000 12929000 41643 5743 1159 5929 14094;14095;14096;14097 11546;11547;11548 11546 3 217670 74997 HGFEAASIKEER ADWTAKKLVWIPSERHGFEAASIKEERGDE SERHGFEAASIKEERGDEVMVELAENGKKA R H G E R G 2 1 0 0 0 0 3 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 12 1 1372.6735 P35580 P35580 43 54 MYH10 Myosin-10 yes yes 3 0.00067386 159.44 By MS/MS 2 0 1 1 747490 747490 0 5744 825 5930 14098 11549 11549 1 252830 0 HGGENVAAVLR LFYQLLHKVDKASVRHGGENVAAVLRAHGV ASVRHGGENVAAVLRAHGVRFIFTLVGGHI R H G L R A 2 1 1 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1121.5942 A1L0T0 A1L0T0 53 63 ILVBL Acetolactate synthase-like protein yes yes 2 0.0018915 112.13 By MS/MS 5.5 0.5 1 1 2 2743400 2743400 0 5745 9 5931 14099;14100 11550;11551 11551 2 21272 0 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 1319.5755 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 46 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 4.3172E-07 182.71 By MS/MS By MS/MS 5.28 2.79 4 2 4 3 4 4 3 3 2 3 19 13 163650000 75200000 88452000 + 5746 55 5932 14101;14102;14103;14104;14105;14106;14107;14108;14109;14110;14111;14112;14113;14114;14115;14116;14117;14118;14119;14120;14121;14122;14123;14124;14125;14126;14127;14128;14129;14130;14131;14132 11552;11553;11554;11555;11556;11557;11558;11559;11560;11561;11562;11563;11564;11565;11566;11567;11568;11569;11570;11571;11572;11573;11574;11575;11576;11577;11578;11579 11555 28 3229000 26998000 HGGICDCQTSR ARFDSKDEILLTLEKHGGICDCQTSRDTTM TLEKHGGICDCQTSRDTTMYAVSADSKGLD K H G S R D 0 1 0 1 2 1 0 2 1 1 0 0 0 0 0 1 1 0 0 0 0 0 11 0 1289.5241 Q10713 Q10713 136 146 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 0.00037769 133.99 By MS/MS 6 0 1 1 1272100 1272100 0 5747 1323 5933 14133 11580 11580 1 8745 0 HGGTIPIVPTAEFQDR LLMSVQESLERKFGKHGGTIPIVPTAEFQD GGTIPIVPTAEFQDRISGASEKDIVHSGLA K H G D R I 1 1 0 1 0 1 1 2 1 2 0 0 0 1 2 0 2 0 0 1 0 0 16 0 1736.8846 P00367 P00367 481 496 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2;3 0.0004736 158.34 By MS/MS 7.17 1.07 2 2 1 1 6 11351000 11351000 0 5748 441 5934 14134;14135;14136;14137;14138;14139 11581;11582 11581 2 87793 0 HGINCFINR AEKEKMKEKVERILKHGINCFINRQLIYNY VERILKHGINCFINRQLIYNYPEQLFGAAG K H G N R Q 0 1 2 0 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 9 0 1129.5451 P78371 P78371 285 293 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00058417 151.29 By MS/MS 7 0.816 1 1 1 3 59116000 59116000 0 5749 1222 5935 14140;14141;14142 11583;11584 11583 2 426860 0 HGIPMSHVAR IGNPPDYRGQSCMKRHGIPMSHVARQITKE SCMKRHGIPMSHVARQITKEDFATFDYILC R H G A R Q 1 1 0 0 0 0 0 1 2 1 0 0 1 0 1 1 0 0 0 1 0 0 10 0 1103.5658 P24666 P24666 67 76 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 3 0.014004 87.149 By MS/MS 10 0 1 1 202450 202450 0 5750 715 5936 14143 11585 11585 353 1 10911 0 HGLEETAAK FAKLKSKLVLWDINKHGLEETAAKCKGLGA LWDINKHGLEETAAKCKGLGAKVHTFVVDC K H G A K C 2 0 0 0 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 954.47706 Q8NBQ5 Q8NBQ5 71 79 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 0.0020171 121.09 By MS/MS 8 0 1 1 536880 536880 0 5751 1943 5937 14144 11586 11586 1 6778 0 HGLGVETK PSGNTYQGYWAQGKRHGLGVETKGKWMYRG YWAQGKRHGLGVETKGKWMYRGEWSHGFKG R H G T K G 0 0 0 0 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 839.45012 Q9HDC5 Q9HDC5 70 77 JPH1 Junctophilin-1 yes yes 2 0.013039 117.93 By MS/MS 5 0 1 1 0 0 0 5752 2520 5938 14145 11587 11587 1 0 0 HGLQSLGK TYKGKSLETQKTTARHGLQSLGKVGISRRM TQKTTARHGLQSLGKVGISRRMPPPANLPS R H G G K V 0 0 0 0 0 1 0 2 1 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 838.4661 P48634;Q9Y520;Q5JSZ5 Q9Y520 40 47 PRRC2A;PRRC2C;PRRC2B Protein PRRC2A;Protein PRRC2C;Protein PRRC2B no no 2 0.0045756 127.46 By MS/MS 4 2 1 1 1 1 1 1 1 7 6033600 6033600 0 5753 2905;938;1609 5939 14146;14147;14148;14149;14150;14151;14152 11588 11588 1 1165700 0 HGLTEELLSR DRFTRRGVDPAPLAKHGLTEELLSRMAAAG APLAKHGLTEELLSRMAAAGGTVSGPSSAC K H G S R M 0 1 0 0 0 0 2 1 1 0 3 0 0 0 0 1 1 0 0 0 0 0 10 0 1153.6091 Q9ULT8 Q9ULT8 230 239 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 1.1628E-05 173.39 By MS/MS 2.5 1.12 1 1 1 1 4 1769600 1769600 0 5754 2774 5940 14153;14154;14155;14156 11589;11590;11591 11590 3 389760 0 HGLTEPER LEDVVTSAIKEAAEKHGLTEPERVLGELEC IKEAAEKHGLTEPERVLGELECQECAIPPG K H G E R V 0 1 0 0 0 0 2 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 8 0 937.46174 Q9Y6D5 Q9Y6D5 308 315 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.013925 116.88 By MS/MS 2 0 1 1 0 0 0 5755 2940 5941 14157 11592 11592 1 0 0 HGLYLPTR FMDTMLQMSILGSAKHGLYLPTRVTAIHID SILGSAKHGLYLPTRVTAIHIDPATHRQKL K H G T R V 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 1 0 1 0 0 0 8 0 955.52395 P49327 P49327 1044 1051 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0018326 144.83 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 18221000 18221000 0 5756 946 5942 14158;14159;14160;14161;14162;14163;14164;14165;14166;14167 11593;11594;11595 11594 3 3421100 0 HGNSHQGEPR SNYELEGKIKEWYEKHGNSHQGEPRDYSKY EWYEKHGNSHQGEPRDYSKYYKTIDDLKNQ K H G P R D 0 1 1 0 0 1 1 2 2 0 0 0 0 0 1 1 0 0 0 0 0 0 10 0 1117.5013 CON__P13645;P13645 CON__P13645 185 194 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 2.8805E-08 189.18 By MS/MS By MS/MS 5.41 2.74 3 3 3 4 3 4 4 3 2 3 15 17 10389000 6315800 4072900 + 5757 50 5943 14168;14169;14170;14171;14172;14173;14174;14175;14176;14177;14178;14179;14180;14181;14182;14183;14184;14185;14186;14187;14188;14189;14190;14191;14192;14193;14194;14195;14196;14197;14198;14199 11596;11597;11598;11599;11600;11601;11602;11603;11604;11605;11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617 11596 22 562780 1795000 HGNSHQGEPRDYSK SNYELEGKIKEWYEKHGNSHQGEPRDYSKY KHGNSHQGEPRDYSKYYKTIDDLKNQILNL K H G S K Y 0 1 1 1 0 1 1 2 2 0 0 1 0 0 1 2 0 0 1 0 0 0 14 1 1610.7186 CON__P13645;P13645 CON__P13645 185 198 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.037262 138.42 By matching By MS/MS 3.5 0.5 1 1 1 1 1425900 78502 1347400 + 5758 50 5944 14200;14201 11618 11618 1 7387.6 171510 HGRPGIGATHSSR GHYLGEFSITYKPVKHGRPGIGATHSSRFI VKHGRPGIGATHSSRFIPLK__________ K H G S R F 1 2 0 0 0 0 0 3 2 1 0 0 0 0 1 2 1 0 0 0 0 0 13 1 1331.6807 P62841 P62841 128 140 RPS15 40S ribosomal protein S15 yes yes 2;3;4 0.0039292 129.82 By MS/MS 9.4 0.49 3 2 5 14339000 14339000 0 5759 1174 5945 14202;14203;14204;14205;14206 11619;11620;11621 11621 3 299200 0 HGSGSGQSPGHGQR GQHESASHHASGRGRHGSGSGQSPGHGQRG RHGSGSGQSPGHGQRGSGSGQSPSYGRHGS R H G Q R G 0 1 0 0 0 2 0 5 2 0 0 0 0 0 1 3 0 0 0 0 0 0 14 0 1347.6028 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 883 896 HRNR Hornerin yes no 2;3 3.7009E-09 216.91 By MS/MS By MS/MS 5.04 2.98 2 4 3 4 2 2 1 3 3 12 12 2639000 1116200 1522800 + 5760 73 5946 14207;14208;14209;14210;14211;14212;14213;14214;14215;14216;14217;14218;14219;14220;14221;14222;14223;14224;14225;14226;14227;14228;14229;14230 11622;11623;11624;11625;11626;11627;11628;11629;11630;11631;11632;11633;11634;11635;11636;11637;11638;11639;11640 11624 19 56146 546770 HGSGSGQSPSPSR GQHGSGSRQSLGHSRHGSGSGQSPSPSRGR SRHGSGSGQSPSPSRGRHESGSRQSSSYGP R H G S R G 0 1 0 0 0 1 0 3 1 0 0 0 0 0 2 5 0 0 0 0 0 0 13 0 1239.5592 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 533 545 HRNR Hornerin yes no 2 9.5371E-14 218.55 By MS/MS By MS/MS 5.14 3.29 2 2 2 2 1 1 2 2 8 6 3715600 1514600 2201000 + 5761 73 5947 14231;14232;14233;14234;14235;14236;14237;14238;14239;14240;14241;14242;14243;14244 11641;11642;11643;11644;11645;11646;11647;11648;11649;11650;11651;11652 11643 12 88670 1001800 HGSGSGQSSGFGHK GRHGSGSGRSSSSGRHGSGSGQSSGFGHKS RHGSGSGQSSGFGHKSSSGQSSGYTQHGSG R H G H K S 0 0 0 0 0 1 0 5 2 0 0 1 0 1 0 4 0 0 0 0 0 0 14 0 1328.5858 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 922 935 HRNR Hornerin yes no 2;3 3.0713E-14 243.4 By MS/MS By MS/MS 4.3 2.19 1 1 2 2 1 2 1 3 7 3719900 990510 2729300 + 5762 73 5948 14245;14246;14247;14248;14249;14250;14251;14252;14253;14254 11653;11654;11655;11656 11654 4 25211 513640 HGSGSGQSSSYGPYR HGSGSGQSPSPSRGRHGSGSGQSSSYGPYR HGSGSGQSSSYGPYRSGSGWSSSRGPYESG R H G Y R S 0 1 0 0 0 1 0 4 1 0 0 0 0 0 1 5 0 0 2 0 0 0 15 0 1525.6546 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1014 1028 HRNR Hornerin yes no 2 1.7499E-22 295.26 By matching By MS/MS 4 2.89 1 1 1 2 1 1 5 1275000 265960 1009100 + 5763 73 5949 14255;14256;14257;14258;14259;14260 11657;11658;11659;11660;11661 11658 5 25029 501130 HGSGSGQSSSYSPYGSGSGWSSSR HGSGSGQSPSPSRGRHGSGSGQSSSYSPYG SYSPYGSGSGWSSSRGPYESGSSHSSGLGH R H G S R G 0 1 0 0 0 1 0 6 1 0 0 0 0 0 1 11 0 1 2 0 0 0 24 0 2347.969 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1484 1507 HRNR Hornerin yes no 3 5.6132E-07 121.35 By MS/MS 3 0 1 1 263970 0 263970 + 5764 73 5950 14261 11662 11662 1 0 33600 HGSLGFLPR ______________________________ KFSAPRHGSLGFLPRKRSSRHRGKVKSFPK R H G P R K 0 1 0 0 0 0 0 2 1 0 2 0 0 1 1 1 0 0 0 0 0 0 9 0 982.53485 P39023 P39023 11 19 RPL3 60S ribosomal protein L3 yes yes 2 0.0011517 132.08 By MS/MS 7 0 1 1 1598500 1598500 0 5765 854 5951 14262 11663 11663 1 25094 0 HGSSSGSSSHYGQHGSGSR GQHGSRSGQSSRGERHGSSSGSSSHYGQHG SGSSSHYGQHGSGSRQSSGHGRQGSGSGHS R H G S R Q 0 1 0 0 0 1 0 5 3 0 0 0 0 0 0 8 0 0 1 0 0 0 19 0 1857.7739 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1209 1227 HRNR Hornerin yes no 2;3;4 2.3737E-10 173.34 By MS/MS By MS/MS 2.5 1.12 2 3 1 2 4 670390 54920 615470 + 5766 73 5952 14263;14264;14265;14266;14267;14268 11664;11665;11666;11667;11668;11669 11665 6 9109.3 98744 HGSSSGSSSRYGQHGSGSR GQHGSRSGQSSRGERHGSSSGSSSRYGQHG SGSSSRYGQHGSGSRQSSGHGRQGSGSGHS R H G S R Q 0 2 0 0 0 1 0 5 2 0 0 0 0 0 0 8 0 0 1 0 0 0 19 1 1876.8161 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 2149 2167 HRNR Hornerin yes no 4 0.048578 44.005 By MS/MS 1 0 1 1 46320 46320 0 + 5767 73 5953 14269 11670 11670 1 11162 0 HGSSSGSSSSYGQHGSGSR EQHGSRSGQSSRSEQHGSSSGSSSSYGQHG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS Q H G S R Q 0 1 0 0 0 1 0 5 2 0 0 0 0 0 0 9 0 0 1 0 0 0 19 0 1807.747 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 973 991 HRNR Hornerin yes no 2;3 1.3585E-57 335.25 By MS/MS By MS/MS 4.82 3.05 3 4 2 3 2 2 2 1 3 9 13 8450400 3574600 4875800 + 5768 73 5954 14270;14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283;14284;14285;14286;14287;14288;14289;14290;14291 11671;11672;11673;11674;11675;11676;11677;11678;11679;11680;11681;11682;11683;11684;11685;11686;11687;11688;11689;11690 11675 20 217640 2121700 HGSSSVELR HRSSCGHSWSGGKDRHGSSSVELRERINKS SGGKDRHGSSSVELRERINKSHISPSRESG R H G L R E 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 970.48321 CON__Q5D862;Q5D862 CON__Q5D862 197 205 FLG2 Filaggrin-2 yes no 2 0.00057869 148.04 By MS/MS 3 0.816 1 1 1 3 1103500 0 1103500 + 5769 67 5955 14292;14293;14294 11691;11692;11693 11692 3 0 652930 HGSVSADEAAR GGPGAQLGASFLQARHGSVSADEAARTAPF LQARHGSVSADEAARTAPFHLDLWFYFTLQ R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 Q9NWW5 Q9NWW5 29 39 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes yes 2 6.7273E-07 194.94 By MS/MS 4.5 3.5 1 1 2 1415300 1415300 0 5770 2615 5956 14295;14296 11694;11695 11695 2 17868 0 HGSYEDAVHSGALND IDDLIKLHPESKDDKHGSYEDAVHSGALND HGSYEDAVHSGALND_______________ K H G N D - 2 0 1 2 0 0 1 2 2 0 1 0 0 0 0 2 0 0 1 1 0 0 15 0 1570.6648 P17987 P17987 542 556 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.6811E-24 290.28 By MS/MS 6 0 1 1 9337600 9337600 0 5771 648 5957 14297 11696 11696 1 64189 0 HGTALQR SKVEDLSTCNDLIAKHGTALQRSLSELESL TCNDLIAKHGTALQRSLSELESLKLPAESN K H G Q R S 1 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 781.41949 P22059 P22059 231 237 OSBP Oxysterol-binding protein 1 yes yes 2 0.024338 108.98 By MS/MS 5 0.816 1 1 1 3 1956100 1956100 0 5772 686 5958 14298;14299;14300 11697 11697 1 163460 0 HGVESTLER VQELASPSLLFIFVRHGVESTLERSAIARE LFIFVRHGVESTLERSAIAREHMGQLLHQL R H G E R S 0 1 0 0 0 0 2 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1026.5094 Q04637 Q04637 1281 1289 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 9.9468E-05 162.25 By MS/MS By matching 3 1.48 1 4 2 1 1 1 9 1 113420000 113250000 172840 5773 1291 5959 14301;14302;14303;14304;14305;14306;14307;14308;14309;14310 11698;11699;11700;11701;11702;11703 11698 5 30679000 244430 HGVFVGSAMR RPKGVPLVYEAFNWRHGVFVGSAMRSESTA AFNWRHGVFVGSAMRSESTAAAEHKGKIIM R H G M R S 1 1 0 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 0 2 0 0 10 0 1059.5284 Q16822 Q16822 470 479 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.044383 75.043 By MS/MS 5 0 1 1 1447400 1447400 0 5774 1560 5960 14311 11704 11704 1 14517 0 HGVIVAADSR IEMLHGTTTLAFKFRHGVIVAADSRATAGA AFKFRHGVIVAADSRATAGAYIASQTVKKV R H G S R A 2 1 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 2 0 0 10 0 1023.5461 P28074 P28074 69 78 PSMB5 Proteasome subunit beta type-5 yes yes 2 1.3376E-05 172.25 By MS/MS By matching 9 0 2 1 1 15464000 15417000 47036 5775 751 5961 14312;14313 11705 11705 1 303400 107260 HGVQELEIELQSQLSK GQEVQSSAKEVTQLRHGVQELEIELQSQLS GVQELEIELQSQLSKKAALEKSLEDTKNRY R H G S K K 0 0 0 0 0 3 3 1 1 1 3 1 0 0 0 2 0 0 0 1 0 0 16 0 1836.9581 P35527;CON__P35527 P35527 375 390 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 1.5963E-05 173.33 By MS/MS 3 0 2 2 223430 0 223430 + 5776 822 5962 14314;14315 11706;11707 11706 2 0 28439 HGVQELEIELQSQLSKK GQEVQSSAKEVTQLRHGVQELEIELQSQLS VQELEIELQSQLSKKAALEKSLEDTKNRYC R H G K K A 0 0 0 0 0 3 3 1 1 1 3 2 0 0 0 2 0 0 0 1 0 0 17 1 1965.0531 P35527;CON__P35527 P35527 375 391 KRT9 Keratin, type I cytoskeletal 9 yes no 3 4.5237E-07 209.23 By MS/MS By MS/MS 4.5 1.5 1 1 1 1 7670000 7498900 171120 + 5777 822 5963 14316;14317 11708;11709 11709 2 51549 21781 HGVYNPNK PVNSTIPITAEVFKKHGVYNPNKIFGVTTL TAEVFKKHGVYNPNKIFGVTTLDIVRANTF K H G N K I 0 0 2 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 1 1 0 0 8 0 927.45626 P40926 P40926 158 165 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0033889 132.96 By MS/MS 7.5 0.5 1 1 2 1108000 1108000 0 5778 862 5964 14318;14319 11710 11710 1 14698 0 HGYAPSDLPVK KIYQVLDFRIRCGMKHGYAPSDLPVKAKRS CGMKHGYAPSDLPVKAKRSTYNYSLPITVK K H G V K A 1 0 0 1 0 0 0 1 1 0 1 1 0 0 2 1 0 0 1 1 0 0 11 0 1182.6033 Q9Y5Q8 Q9Y5Q8 329 339 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.0063894 100.25 By MS/MS 5.5 0.5 1 1 2 1889200 1889200 0 5779 2919 5965 14320;14321 11711;11712 11711 2 14693 0 HGYIGEFEIIDDHR PCSKVIVRFLTVMMKHGYIGEFEIIDDHRA KHGYIGEFEIIDDHRAGKIVVNLTGRLNKC K H G H R A 0 1 0 2 0 0 2 2 2 3 0 0 0 1 0 0 0 0 1 0 0 0 14 0 1699.7954 P62244 P62244 44 57 RPS15A 40S ribosomal protein S15a yes yes 3 0.00028963 166.62 By MS/MS 10 0 1 1 1976800 1976800 0 5780 1144 5966 14322 11713 11713 1 106540 0 HHAEVVKK PWPEVVLPDPVEETRHHAEVVKKVNEMIVT DPVEETRHHAEVVKKVNEMIVTGQYGRLFA R H H K K V 1 0 0 0 0 0 1 0 2 0 0 2 0 0 0 0 0 0 0 2 0 0 8 1 946.53485 Q7Z2W9 Q7Z2W9 75 82 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 3 0.031454 82.241 By MS/MS 9 0 1 1 0 0 0 5781 1779 5967 14323 11714 11714 1 0 0 HHAISAK KLPGDKGLVLMSRAKHHAISAKLNKPFLFD LVLMSRAKHHAISAKLNKPFLFDTKPLIVQ K H H A K L 2 0 0 0 0 0 0 0 2 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 762.41367 P27824 P27824 128 134 CANX Calnexin yes yes 2 0.044235 94.006 By MS/MS 4 0 1 1 321080 321080 0 5782 747 5968 14324 11715 11715 1 30215 0 HHEDNLLR EIISNAAEYENIPIRHHEDNLLRQLAQKVP YENIPIRHHEDNLLRQLAQKVPHKLNNPKF R H H L R Q 0 1 1 1 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1032.5101 O75643 O75643 1862 1869 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 3 0.024109 79.713 By MS/MS 1.5 0.5 1 1 2 461880 461880 0 5783 340 5969 14325;14326 11716 11716 1 141150 0 HHIETGGGQLPAK PIAVSGVRGMGFLMRHHIETGGGQLPAKLS MRHHIETGGGQLPAKLSSLFVKCLQNPSSD R H H A K L 1 0 0 0 0 1 1 3 2 1 1 1 0 0 1 0 1 0 0 0 0 0 13 0 1343.6946 Q92616 Q92616 2538 2550 GCN1L1 Translational activator GCN1 yes yes 2;3 5.7037E-06 254.07 By MS/MS 2.71 1.03 1 2 2 2 7 4604400 4604400 0 5784 2064 5970 14327;14328;14329;14330;14331;14332;14333 11717;11718;11719 11717 3 1253200 0 HHNQSTAINLNNPESQSMHLETR KLCDNLRMHLSQIQRHHNQSTAINLNNPES NLNNPESQSMHLETRLVQLDSAISMELWQE R H H T R L 1 1 4 0 0 2 2 0 3 1 2 0 1 0 1 3 2 0 0 0 0 0 23 0 2657.2365 Q14152 Q14152 211 233 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 4 0.0067789 64.203 By MS/MS 3.5 1.12 1 1 1 1 4 2822100 2822100 0 5785 1422 5971 14334;14335;14336;14337 11720;11721 11720 813 2 257420 0 HHPDLIFCR ______________________________ ______________________________ K H H C R K 0 1 0 1 1 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1193.5764 Q7RTV0 Q7RTV0 4 12 PHF5A PHD finger-like domain-containing protein 5A yes yes 3 0.042176 76.221 By MS/MS 10 0 1 1 186520 186520 0 5786 1776 5972 14338 11722 11722 1 10053 0 HHYEQQQEDLAR QEESVDPDYWEKLLRHHYEQQQEDLARNLG LLRHHYEQQQEDLARNLGKGKRIRKQVNYN R H H A R N 1 1 0 1 0 3 2 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 12 0 1552.7019 Q14839;Q8TDI0;Q12873 Q14839 1320 1331 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2;3 1.1134E-12 194.48 By MS/MS 2.4 1.02 1 2 1 1 5 5385800 5385800 0 5787 1459 5973 14339;14340;14341;14342;14343 11723;11724 11724 2 1575300 0 HIAEEADRKYEEVAR EEKMELQEIQLKEAKHIAEEADRKYEEVAR HIAEEADRKYEEVARKLVIIEGDLERTEER K H I A R K 3 2 0 1 0 0 4 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 15 2 1814.8911 P06753;P67936 P06753 154 168 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain yes no 3;4 0.015163 71.513 By MS/MS 8 0 2 2 2604200 2604200 0 5788 504 5974 14344;14345 11725;11726 11726 2 32878 0 HIAFSGNK ALSDCGDHVVIMNTRHIAFSGNKWEQKVYS VVIMNTRHIAFSGNKWEQKVYSSHTGYPGG R H I N K W 1 0 1 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 8 0 872.45045 Q9BYD1 Q9BYD1 64 71 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.010393 110.31 By MS/MS 9 0 1 1 1870000 1870000 0 5789 2368 5975 14346 11727 11727 1 36801 0 HIAVVLEEIPK ILEEEDDLWVRIRHRHIAVVLEEIPKLMKE IRHRHIAVVLEEIPKLMKEISSTKKATEGK R H I P K L 1 0 0 0 0 0 2 0 1 2 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1246.7285 O00186 O00186 296 306 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.02584 85.67 By MS/MS 5 0 1 1 241850 241850 0 5790 89 5976 14347 11728 11728 0 2425.6 0 HIDEVVYPPPVDPK VFMHVSTAYAYCNRKHIDEVVYPPPVDPKK KHIDEVVYPPPVDPKKLIDSLEWMDDGLVN K H I P K K 0 0 0 2 0 0 1 0 1 1 0 1 0 0 4 0 0 0 1 3 0 0 14 0 1603.8246 Q8WVX9 Q8WVX9 162 175 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.0014016 117.98 By MS/MS 6 0 1 1 3911400 3911400 0 5791 2031 5977 14348 11729 11729 1 26888 0 HIDFSLR VVNIPSFIVRLDSQKHIDFSLRSPYGGGRP IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN K H I L R S 0 1 0 1 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 7 0 886.4661 P46781 P46781 156 162 RPS9 40S ribosomal protein S9 yes yes 2 0.010523 134.06 By MS/MS By matching 9 0.632 1 3 1 4 1 125060000 124970000 89538 5792 918 5978 14349;14350;14351;14352;14353 11730;11731;11732;11733;11734 11733 5 2479000 204170 HIDLVEGDEGR IIGTGTNACYMEELRHIDLVEGDEGRMCIN EELRHIDLVEGDEGRMCINTEWGAFGDDGS R H I G R M 0 1 0 2 0 0 2 2 1 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1238.5891 P19367 P19367 244 254 HK1 Hexokinase-1 yes yes 2 2.1614E-05 162.36 By MS/MS 4 0 1 1 1665600 1665600 0 5793 660 5979 14354 11735 11735 1 156750 0 HIDMVEGDEGR IVGTGSNACYMEEMRHIDMVEGDEGRMCIN EEMRHIDMVEGDEGRMCINMEWGAFGDDGS R H I G R M 0 1 0 2 0 0 2 2 1 1 0 0 1 0 0 0 0 0 0 1 0 0 11 0 1256.5455 P52789 P52789 244 254 HK2 Hexokinase-2 yes yes 2 0.00050194 131.52 By MS/MS 4 0 1 1 415600 415600 0 5794 1023 5980 14355 11736 11736 1 39111 0 HIDPVVLK DAQADEAVLDHPDLKHIDPVVLKHCHAAAA LDHPDLKHIDPVVLKHCHAAAATYILEAGK K H I L K H 0 0 0 1 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 2 0 0 8 0 919.5491 Q9UBI1 Q9UBI1 53 60 COMMD3 COMM domain-containing protein 3 yes yes 2 0.017235 102.71 By MS/MS 9 0 1 1 572420 572420 0 5795 2698 5981 14356 11737 11737 1 11265 0 HIDQLKER PLLIVEKQKLLLKKRHIDQLKEREYNNYSW KLLLKKRHIDQLKEREYNNYSWQDLVASGV R H I E R E 0 1 0 1 0 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1037.5618 P30876 P30876 639 646 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.0060884 125.82 By MS/MS 3.5 0.5 1 1 2 527190 527190 0 5796 781 5982 14357;14358 11738 11738 1 22204 0 HIDQQIQGSR LPFLKAAHVSEQFARHIDQQIQGSRIGGAQ EQFARHIDQQIQGSRIGGAQEMERLAQLQQ R H I S R I 0 1 0 1 0 3 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 10 0 1180.5949 Q14999 Q14999 1223 1232 CUL7 Cullin-7 yes yes 2 0.00025495 143.4 By MS/MS 2 0.816 1 1 1 3 527530 527530 0 5797 1464 5983 14359;14360;14361 11739 11739 1 144340 0 HIHFDVVK ALERFYEQVVQAIQRHIHFDVVKCILVASP VVQAIQRHIHFDVVKCILVASPGFVREQFC R H I V K C 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 993.5396 Q9BRX2 Q9BRX2 196 203 PELO Protein pelota homolog yes yes 3 0.017295 122.18 By MS/MS 7 0 1 1 416320 416320 0 5798 2301 5984 14362 11740 11740 1 6535.4 0 HIIEDPCTLR SGFNGFTPLVTLLLRHIIEDPCTLRHTMEK TLLLRHIIEDPCTLRHTMEKVVRSAATSGA R H I L R H 0 1 0 1 1 0 1 0 1 2 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1252.6234 Q7Z6Z7 Q7Z6Z7 1826 1835 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.023027 87.476 By MS/MS 1.5 0.5 1 1 2 571570 571570 0 5799 1802 5985 14363;14364 11741 11741 1 165370 0 HIIEDTEEAR VEERLEYALVKGIEKHIIEDTEEARLNQKK KGIEKHIIEDTEEARLNQKKYPRPLNIIEG K H I A R L 1 1 0 1 0 0 3 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1211.5782 Q99707 Q99707 686 695 MTR Methionine synthase yes yes 2 0.0025676 111.06 By MS/MS 3 0 1 1 425720 425720 0 5800 2260 5986 14365 11742 11742 1 7789.4 0 HILAAEQK TGIDRTLNCMIGQMKHILAAEQKKTDFKPE CMIGQMKHILAAEQKKTDFKPEDENNVLIQ K H I Q K K 2 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 908.50797 O00471 O00471 549 556 EXOC5 Exocyst complex component 5 yes yes 2 0.027221 91.626 By MS/MS 5 0 1 1 970170 970170 0 5801 108 5987 14366 11743 11743 1 9730.3 0 HILLYGPPGTGK AIATRNTKKNRGLYRHILLYGPPGTGKTLF LYRHILLYGPPGTGKTLFAKKLALHSGMDY R H I G K T 0 0 0 0 0 0 0 3 1 1 2 1 0 0 2 0 1 0 1 0 0 0 12 0 1251.6976 Q5T9A4;Q5T2N8 Q5T9A4 347 358 ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 2 0.0026656 110.38 By MS/MS 5 0 1 1 2313100 2313100 0 5802 1638 5988 14367 11744 11744 1 23199 0 HINDSAPEVR LPKSLLKPFCAALLKHINDSAPEVRDAAFE AALLKHINDSAPEVRDAAFEALGTALKVVG K H I V R D 1 1 1 1 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 10 0 1136.5574 Q14008 Q14008 447 456 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 5.648E-06 177.3 By MS/MS 2.5 1.12 1 1 1 1 4 5630500 5630500 0 5803 1417 5989 14368;14369;14370;14371 11745;11746 11745 2 1631000 0 HIPANRGEIK REKLASRPTRPPEPRHIPANRGEIKGSESA PPEPRHIPANRGEIKGSESATYVPVAPPTP R H I I K G 1 1 1 0 0 0 1 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 10 1 1133.6305 Q6PKG0 Q6PKG0 280 289 LARP1 La-related protein 1 yes yes 3 0.029473 73.985 By MS/MS 4 0.816 1 1 1 3 1159300 1159300 0 5804 1722 5990 14372;14373;14374 11747 11747 1 41278 0 HIRLENNDNKPVTNSR VKWIFVKDVPNNQLRHIRLENNDNKPVTNS IRLENNDNKPVTNSRDTQEVPLEKAKQVLK R H I S R D 0 2 4 1 0 0 1 0 1 1 1 1 0 0 1 1 1 0 0 1 0 0 16 2 1905.9769 Q7Z739 Q7Z739 518 533 YTHDF3 YTH domain-containing family protein 3 no no 4 0.052985 43.914 By MS/MS 5 0 1 1 548530 548530 0 5805 1803 5991 14375 11748 11748 0 5501.5 0 HIRLENNENKPVTNSR VRWIFVKDVPNSQLRHIRLENNENKPVTNS IRLENNENKPVTNSRDTQEVPLEKAKQVLK R H I S R D 0 2 4 0 0 0 2 0 1 1 1 1 0 0 1 1 1 0 0 1 0 0 16 2 1919.9926 Q9Y5A9 Q9Y5A9 512 527 YTHDF2 YTH domain-containing family protein 2 yes yes 4 0.053342 48.823 By MS/MS 5 0 1 1 1425700 1425700 0 5806 2908 5992 14376 11749 11749 1 14299 0 HISPGDTK THSTHPDDEDSGPYKHISPGDTKVVVENGE EDSGPYKHISPGDTKVVVENGELIMGILCK K H I T K V 0 0 0 1 0 0 0 1 1 1 0 1 0 0 1 1 1 0 0 0 0 0 8 0 853.42938 P24928 P24928 620 627 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.015888 104.21 By MS/MS 2 0 1 1 212720 212720 0 5807 717 5993 14377 11750 11750 1 71951 0 HITIFSPEGR ______________________________ AGFDRHITIFSPEGRLYQVEYAFKAINQGG R H I G R L 0 1 0 0 0 0 1 1 1 2 0 0 0 1 1 1 1 0 0 0 0 0 10 0 1155.6037 P60900 P60900 12 21 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.0011359 120.99 By MS/MS 9 0.816 1 1 1 3 5151700 5151700 0 5808 1099 5994 14378;14379;14380 11751 11751 1 73497 0 HIVENAVQK EKFVPYYDLFMPSLKHIVENAVQKELRLLR FMPSLKHIVENAVQKELRLLRGKTIECISL K H I Q K E 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 9 0 1036.5665 O00410 O00410 540 548 IPO5 Importin-5 yes yes 2 0.00038098 150.36 By MS/MS 4.5 1.12 1 1 1 1 4 14879000 14879000 0 5809 103 5995 14381;14382;14383;14384 11752;11753 11752 2 1056900 0 HIVENAVQKELR EKFVPYYDLFMPSLKHIVENAVQKELRLLR SLKHIVENAVQKELRLLRGKTIECISLIGL K H I L R L 1 1 1 0 0 1 2 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 12 1 1434.7943 O00410 O00410 540 551 IPO5 Importin-5 yes yes 3 0.002981 104.41 By MS/MS 4.5 0.5 1 1 2 1808000 1808000 0 5810 103 5996 14385;14386 11754 11754 1 135710 0 HIVKEFK DTFLGGEDFDQALLRHIVKEFKRETGVDLT DFDQALLRHIVKEFKRETGVDLTKDNMALQ R H I F K R 0 0 0 0 0 0 1 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 7 1 899.52289 P38646 P38646 285 291 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.0090238 143.85 By MS/MS 5 0 1 1 9543000 9543000 0 5811 850 5997 14387 11755 11755 1 95712 0 HIVKEFKR DTFLGGEDFDQALLRHIVKEFKRETGVDLT FDQALLRHIVKEFKRETGVDLTKDNMALQR R H I K R E 0 1 0 0 0 0 1 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 8 2 1055.624 P38646 P38646 285 292 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.019716 118.74 By MS/MS 5 0 1 1 690110 690110 0 5812 850 5998 14388 11756 11756 1 6921.4 0 HIYYITGETK VSLKDYCTRMKENQKHIYYITGETKDQVAN KENQKHIYYITGETKDQVANSAFVERLRKH K H I T K D 0 0 0 0 0 0 1 1 1 2 0 1 0 0 0 0 2 0 2 0 0 0 10 0 1223.6186 P07900;Q58FG0 P07900 490 499 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 2 0.010326 93.598 By MS/MS By matching 4.33 0.471 2 1 2 1 22590000 22562000 28715 5813 513 5999 14389;14390;14391 11757 11757 1 1939200 61181 HKASVEDADTQSK ARLQSVLGKVNEIAKHKASVEDADTQSKVH AKHKASVEDADTQSKVHQLYETIQRWSPIA K H K S K V 2 0 0 2 0 1 1 0 1 0 0 2 0 0 0 2 1 0 0 1 0 0 13 1 1414.6688 Q13561 Q13561 296 308 DCTN2 Dynactin subunit 2 yes yes 3 0.011485 113.52 By MS/MS 6 0 1 1 712510 712510 0 5814 1397 6000 14392 11758 11758 1 4897.9 0 HKDIDILIVR ANVIHCKSLPGVVTRHKDIDILIVRENTEG GVVTRHKDIDILIVRENTEGEYSSLEHESV R H K V R E 0 1 0 2 0 0 0 0 1 3 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1220.7241 P51553 P51553 158 167 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 3 0.00041045 130.41 By MS/MS 7 0 1 1 1735300 1735300 0 5815 996 6001 14393 11759 11759 1 27242 0 HKDLQQQLVDAK EQYELREEHIDKVFKHKDLQQQLVDAKLQQ VFKHKDLQQQLVDAKLQQAQEMLKEAEERH K H K A K L 1 0 0 2 0 3 0 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 12 1 1421.7627 P40222 P40222 329 340 TXLNA Alpha-taxilin yes yes 3 0.0051202 94.538 By MS/MS 5 0 1 1 1403100 1403100 0 5816 857 6002 14394 11760 11760 1 14072 0 HKELAPYDENWFYTR KLKVPEWVDTVKLAKHKELAPYDENWFYTR HKELAPYDENWFYTRAASTARHLYLRGGAG K H K T R A 1 1 1 1 0 0 2 0 1 0 1 1 0 1 1 0 1 1 2 0 0 0 15 1 1967.9166 P39019 P39019 42 56 RPS19 40S ribosomal protein S19 yes yes 3 0.03482 84.173 By MS/MS 10 0 1 1 138110 138110 0 5817 853 6003 14395 11761 11761 0 7443.9 0 HKEQNNDSQLK AQDTVIKAKYAEVAKHKEQNNDSQLKIKEL EVAKHKEQNNDSQLKIKELDHNISKHKREA K H K L K I 0 0 2 1 0 2 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 11 1 1339.648 O95347 O95347 899 909 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2;3 0.0045696 126.19 By MS/MS 3 0 2 2 432290 432290 0 5818 405 6004 14396;14397 11762;11763 11762 2 7909.7 0 HKEVEAAQGVK PPPMKELRVKNQYEKHKEVEAAQGVKILGK QYEKHKEVEAAQGVKILGKDLEKTLAGLPL K H K V K I 2 0 0 0 0 1 2 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 11 1 1194.6357 O60841 O60841 922 932 EIF5B Eukaryotic translation initiation factor 5B yes yes 2;3 9.8962E-05 163.84 By MS/MS 2.2 0.748 1 2 2 5 1134700 1134700 0 5819 283 6005 14398;14399;14400;14401;14402 11764;11765;11766;11767 11766 4 270980 0 HKGGDSSSGPQR PRKLRAELEAALGKKHKGGDSSSGPQRLVS GKKHKGGDSSSGPQRLVSFRLIRDLHQHLR K H K Q R L 0 1 0 1 0 1 0 3 1 0 0 1 0 0 1 3 0 0 0 0 0 0 12 1 1211.5643 Q8N511 Q8N511 42 53 TMEM199 Transmembrane protein 199 yes yes 2;3 0.031533 99.53 By MS/MS 9 0 2 2 63510 63510 0 5820 1920 6006 14403;14404 11768;11769 11768 2 1249.9 0 HKKDISENK DNRMVNHFIAEFKRKHKKDISENKRAVRRL AEFKRKHKKDISENKRAVRRLRTACERAKR K H K N K R 0 0 1 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 0 0 0 0 9 2 1097.5829 P11142 P11142 249 257 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.025491 112.11 By MS/MS 5 0 2 2 162240 162240 0 5821 572 6007 14405;14406 11770;11771 11770 2 1627.1 0 HKKDISQNK DNRLVNHFVEEFKRKHKKDISQNKRAVRRL EEFKRKHKKDISQNKRAVRRLRTACERAKR K H K N K R 0 0 1 1 0 1 0 0 1 1 0 3 0 0 0 1 0 0 0 0 0 0 9 2 1096.5989 P0DMV9;P0DMV8 P0DMV9 249 257 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.00075067 153.05 By MS/MS 5 0 2 2 128550 128550 0 5822 550 6008 14407;14408 11772;11773 11772 2 1289.3 0 HKLDVTSVEDYK AILTCPFEPPKPKTKHKLDVTSVEDYKALQ KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ K H K Y K A 0 0 0 2 0 0 1 0 1 0 1 2 0 0 0 1 1 0 1 2 0 0 12 1 1432.7198 P48643 P48643 264 275 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.0007733 159.44 By MS/MS 6.29 1.03 2 2 2 1 7 37195000 37195000 0 5823 940 6009 14409;14410;14411;14412;14413;14414;14415 11774;11775;11776 11775 3 276990 0 HKLDVTSVEDYKALQK AILTCPFEPPKPKTKHKLDVTSVEDYKALQ KLDVTSVEDYKALQKYEKEKFEEMIQQIKE K H K Q K Y 1 0 0 2 0 1 1 0 1 0 2 3 0 0 0 1 1 0 1 2 0 0 16 2 1872.9945 P48643 P48643 264 279 CCT5 T-complex protein 1 subunit epsilon yes yes 3;4 0.0001226 180.27 By MS/MS 6 0 2 2 5466600 5466600 0 5824 940 6010 14416;14417 11777;11778;11779 11777 3 37579 0 HKNEMLRVEAEAR EAMRRATVEREMELRHKNEMLRVEAEARAR LRHKNEMLRVEAEARARAKAERENADIIRE R H K A R A 2 2 1 0 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 13 2 1581.8046 Q9NVI7 Q9NVI7 230 242 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 4 0.016436 72.705 By MS/MS 5 0 1 1 871070 871070 0 5825 2598 6011 14418 11780 11780 1 8736.4 0 HKQSLEEAAK ELKQVMQQRSEDNARHKQSLEEAAKTIQDK EDNARHKQSLEEAAKTIQDKNKEIERLKAE R H K A K T 2 0 0 0 0 1 2 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 10 1 1139.5935 P15924 P15924 1309 1318 DSP Desmoplakin yes yes 2;3 0.0010406 131.09 By MS/MS 4 2.35 1 2 1 4 777910 0 777910 5826 628 6012 14419;14420;14421;14422 11781;11782;11783;11784 11782 4 0 173140 HKSETDTSLIR DEPIDLFMIEIMEMKHKSETDTSLIRGLVL MEMKHKSETDTSLIRGLVLDHGARHPDMKK K H K I R G 0 1 0 1 0 0 1 0 1 1 1 1 0 0 0 2 2 0 0 0 0 0 11 1 1285.6626 P40227 P40227 198 208 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 0.00013474 151.79 By MS/MS 5.33 1.89 1 1 1 1 2 2 1 9 73014000 73014000 0 5827 858 6013 14423;14424;14425;14426;14427;14428;14429;14430;14431 11785;11786;11787;11788 11786 4 612630 0 HLADHGQLSGIQR RGVKRRWRLSRIVFRHLADHGQLSGIQRAT FRHLADHGQLSGIQRATW____________ R H L Q R A 1 1 0 1 0 2 0 2 2 1 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1430.7379 O60783 O60783 113 125 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2 0.00011753 171.67 By MS/MS 10 0 1 1 571420 571420 0 5828 277 6014 14432 11789 11789 1 30797 0 HLAGLGLTEAIDK SLPKGVVEVTHDLQKHLAGLGLTEAIDKNK QKHLAGLGLTEAIDKNKADLSRMSGKKDLY K H L D K N 2 0 0 1 0 0 1 2 1 1 3 1 0 0 0 0 1 0 0 0 0 0 13 0 1336.7351 P50454 P50454 320 332 SERPINH1 Serpin H1 yes yes 2 0.0064951 125.23 By MS/MS 6.5 0.5 1 1 2 2478600 2478600 0 5829 975 6015 14433;14434 11790 11790 1 27828 0 HLAQCLQER SSPFPPAMPRVLRHRHLAQCLQERVVS___ RVLRHRHLAQCLQERVVS____________ R H L E R V 1 1 0 0 1 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1153.5662 Q8N2G8 Q8N2G8 519 527 GHDC GH3 domain-containing protein yes yes 2 0.0021652 119.21 By MS/MS 6 0 1 1 3104300 3104300 0 5830 1908 6016 14435 11791 11791 1 21340 0 HLCEEADIR NPDTEAVLVAMSCFRHLCEEADIRCGVDEV AMSCFRHLCEEADIRCGVDEVSVHNLLPNY R H L I R C 1 1 0 1 1 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1141.5186 P21359 P21359 712 720 NF1 Neurofibromin;Neurofibromin truncated yes yes 2 0.055878 82.241 By MS/MS 2 0 1 1 0 0 0 5831 678 6017 14436 11792 11792 1 0 0 HLDQIIPR LLARMKIDPEAFITRHLDQIIPRMTTQSPL PEAFITRHLDQIIPRMTTQSPLNQSSMNAM R H L P R M 0 1 0 1 0 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 8 0 990.56106 Q92616 Q92616 705 712 GCN1L1 Translational activator GCN1 yes yes 2 0.023363 95.909 By MS/MS 2.5 1.12 1 1 1 1 4 7842700 7842700 0 5832 2064 6018 14437;14438;14439;14440 11793;11794 11794 2 2161500 0 HLEAILTK TGEETEGMDGQIYKRHLEAILTKISLKNNL DGQIYKRHLEAILTKISLKNNLDHLLASLL R H L T K I 1 0 0 0 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 8 0 923.54402 Q9H583 Q9H583 378 385 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.0039801 130.22 By MS/MS 2 0 1 1 683460 683460 0 5833 2451 6019 14441 11795 11795 1 231170 0 HLEEKQLSEGK QGQRLVFCLLELLSRHLEEKQLSEGKSSSS LLSRHLEEKQLSEGKSSSSYHTWNTGTEGP R H L G K S 0 0 0 0 0 1 3 1 1 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1296.6674 Q8TEQ6 Q8TEQ6 1130 1140 GEMIN5 Gem-associated protein 5 yes yes 3 0.030456 70.942 By MS/MS 3 0 1 1 311800 311800 0 5834 2002 6020 14442 11796 11796 1 5705 0 HLEHECPER CPACKGLVRLGEKERHLEHECPERSLSCRH LGEKERHLEHECPERSLSCRHCRAPCCGAD R H L E R S 0 1 0 0 1 0 3 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 9 0 1205.5248 Q12933 Q12933 151 159 TRAF2 TNF receptor-associated factor 2 yes yes 2 0.0005505 145.16 By MS/MS 6 0 1 1 563600 563600 0 5835 1341 6021 14443 11797 11797 1 3874.3 0 HLEINPDHPIVETLR ALRDNSTMGYMMAKKHLEINPDHPIVETLR HLEINPDHPIVETLRQKAEADKNDKAVKDL K H L L R Q 0 1 1 1 0 0 2 0 2 2 2 0 0 0 2 0 1 0 0 1 0 0 15 0 1781.9424 P08238 P08238 625 639 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.00031271 137.73 By MS/MS 5.5 1.12 1 1 1 1 4 16149000 16149000 0 5836 521 6022 14444;14445;14446;14447 11798;11799;11800 11799 3 915010 0 HLEQQAEK MGSVSTEPDDEEGLKHLEQQAEKMVAYLQD DDEEGLKHLEQQAEKMVAYLQDSALDDERL K H L E K M 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 981.48796 Q6Y7W6 Q6Y7W6 490 497 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 0.0011916 151.04 By MS/MS 2.5 0.5 1 1 2 334370 334370 0 5837 1738 6023 14448;14449 11801;11802 11802 2 58871 0 HLESFPK DDDGSEFHEHIFLEKHLESFPKQGPIRHFM HEHIFLEKHLESFPKQGPIRHFMELVTCGL K H L P K Q 0 0 0 0 0 0 1 0 1 0 1 1 0 1 1 1 0 0 0 0 0 0 7 0 856.4443 Q92665 Q92665 337 343 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.054827 88.643 By MS/MS 7 0 1 1 976610 976610 0 5838 2067 6024 14450 11803 11803 1 15331 0 HLETGGQK TRAASIYSSWAEEQRHLETGGQKIEADSRT SWAEEQRHLETGGQKIEADSRTLWAHCWCP R H L Q K I 0 0 0 0 0 1 1 2 1 0 1 1 0 0 0 0 1 0 0 0 0 0 8 0 868.44028 Q92538 Q92538 1522 1529 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.03615 87.754 By MS/MS 2 0 1 1 483710 483710 0 5839 2050 6025 14451 11804 11804 1 163610 0 HLEVISGQK YKAVKSEANATQLLRHLEVISGQKLTRLFT ATQLLRHLEVISGQKLTRLFTSNQILTSEC R H L Q K L 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 1009.5556 Q8TCG1 Q8TCG1 32 40 KIAA1524 Protein CIP2A yes yes 2 0.0014985 127.68 By MS/MS 4 0 1 1 1492200 1492200 0 5840 1990 6026 14452 11805 11805 1 140430 0 HLFAILGGSEGK ARQCSDSSAMESLTKHLFAILGGSEGKLTV LTKHLFAILGGSEGKLTVVAQKMSVLSGIG K H L G K L 1 0 0 0 0 0 1 3 1 1 2 1 0 1 0 1 0 0 0 0 0 0 12 0 1227.6612 Q92616 Q92616 341 352 GCN1L1 Translational activator GCN1 yes yes 2 0.0047059 104.42 By MS/MS 2 0 1 1 315900 315900 0 5841 2064 6027 14453 11806 11806 1 106850 0 HLLIGVSSDR LYEKADIKGPEDKKKHLLIGVSSDRGLCGA EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK K H L D R G 0 1 0 1 0 0 0 1 1 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1095.6037 P36542 P36542 91 100 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.017182 88.177 By MS/MS 8.5 1.12 1 1 1 1 4 21383000 21383000 0 5842 835 6028 14454;14455;14456;14457 11807;11808 11807 2 287260 0 HLLPVETQR WVYLEGIFTGSADIKHLLPVETQRFQSIST GSADIKHLLPVETQRFQSISTEFLALMKKV K H L Q R F 0 1 0 0 0 1 1 0 1 0 2 0 0 0 1 0 1 0 0 1 0 0 9 0 1091.6087 Q14204 Q14204 1559 1567 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.044646 78.264 By MS/MS 1.5 0.5 1 1 2 3471400 3471400 0 5843 1433 6029 14458;14459 11809 11809 1 979150 0 HLNDDDVTGSVK ______________________________ FKRHLNDDDVTGSVKSERRNLLEDDSDEEE R H L V K S 0 0 1 3 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 12 0 1298.6103 O75379 O75379 8 19 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 5.544E-06 185.99 By MS/MS 9 0 1 1 265390 265390 0 5844 317 6030 14460 11810 11810 1 5223 0 HLNPDTELKR APLSSRKHVLYVEHRHLNPDTELKRYFGAR YVEHRHLNPDTELKRYFGARAILGEQRPRQ R H L K R Y 0 1 1 1 0 0 1 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 10 1 1221.6466 Q9BQ70 Q9BQ70 184 193 TCF25 Transcription factor 25 yes yes 3 0.00061015 149.33 By MS/MS 5 0 1 1 1630800 1630800 0 5845 2284 6031 14461 11811 11811 1 16356 0 HLQAVDYASR FSYYGLTVWFPDMIRHLQAVDYASRTKVFP PDMIRHLQAVDYASRTKVFPGERVEHVTFN R H L S R T 2 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1158.5782 Q7L0J3 Q7L0J3 474 483 SV2A Synaptic vesicle glycoprotein 2A yes yes 2 0.010513 93.178 By MS/MS 2 0.816 1 1 1 3 382840 382840 0 5846 1758 6032 14462;14463;14464 11812 11812 1 96000 0 HLQEAEQTK FQNESAAALAAAATRHLQEAEQTKNSGTEH AAAATRHLQEAEQTKNSGTEHWWKIHEACM R H L T K N 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 1082.5356 Q96P70 Q96P70 428 436 IPO9 Importin-9 yes yes 2 0.00032566 152.06 By MS/MS 3 0 1 1 686020 686020 0 5847 2208 6033 14465 11813 11813 1 12552 0 HLQLAIRNDEELNK GNAARDNKKTRIIPRHLQLAIRNDEELNKL RHLQLAIRNDEELNKLLGKVTIAQGGVLPN R H L N K L 1 1 2 1 0 1 2 0 1 1 3 1 0 0 0 0 0 0 0 0 0 0 14 1 1691.8955 Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P0C0S8;Q93077;P20671;Q96QV6;Q7L7L0;P04908;P16104 Q99878 83 96 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AC;HIST1H2AD;HIST1H2AA;HIST3H2A;HIST1H2AB;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 1-D;Histone H2A type 1-A;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2AX yes no 3 0.0043062 98.898 By MS/MS 10 0 1 1 1167600 1167600 0 5848 546 6034 14466 11814 11814 1 62931 0 HLRDEGLR KRLQGEMMKLSEENRHLRDEGLRLRKVAHS KLSEENRHLRDEGLRLRKVAHSDKPGSTST R H L L R L 0 2 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 994.53083 Q9P0L0 Q9P0L0 195 202 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.017559 124.08 By MS/MS 9 0.816 1 1 1 3 6238800 6238800 0 5849 2665 6035 14467;14468;14469 11815 11815 1 88054 0 HLSASQK MDRRDHPLPEVAHVKHLSASQKALKEKEKA LPEVAHVKHLSASQKALKEKEKASWSSLSM K H L Q K A 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 7 0 769.40825 P13073 P13073 54 60 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.015743 120.49 By MS/MS 9.5 0.5 1 1 2 5395800 5395800 0 5850 598 6036 14470;14471 11816 11816 1 289070 0 HLSDSINQK DVANVCNEAALIAARHLSDSINQKHFEQAI ALIAARHLSDSINQKHFEQAIERVIGGLEK R H L Q K H 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 2 0 0 0 0 0 0 9 0 1040.5251 Q9Y4W6 Q9Y4W6 535 543 AFG3L2 AFG3-like protein 2 yes yes 2 0.0010987 132.76 By MS/MS 6 0.816 1 1 1 3 3569300 3569300 0 5851 2902 6037 14472;14473;14474 11817 11817 1 36629 0 HLSVNDLPVGR ALRGLFIIDPNGVIKHLSVNDLPVGRSVEE GVIKHLSVNDLPVGRSVEETLRLVKAFQYV K H L G R S 0 1 1 1 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1205.6517 P30048 P30048 197 207 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 1.4664E-05 188.91 By MS/MS 9 0.816 1 1 1 3 7699000 7699000 0 5852 764 6038 14475;14476;14477 11818;11819 11819 2 159260 0 HLTASEAK EDMDCLTFGSPVLMRHLTASEAKKLPIQEF GSPVLMRHLTASEAKKLPIQEFHLSRILQE R H L A K K 2 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 8 0 855.44503 P39748 P39748 193 200 FEN1 Flap endonuclease 1 yes yes 2 0.0031523 134.06 By MS/MS 7 0.816 1 1 1 3 4629700 4629700 0 5853 856 6039 14478;14479;14480 11820;11821;11822 11821 3 65365 0 HLTDAYFK ATSTKIDISNVKIPKHLTDAYFKKKKLRKP SNVKIPKHLTDAYFKKKKLRKPRHQEGEIF K H L F K K 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 993.49198 Q02878 Q02878 211 218 RPL6 60S ribosomal protein L6 yes yes 2 0.023054 96.253 By MS/MS 7 0 1 1 5861900 5861900 0 5854 1281 6040 14481 11823 11823 1 92021 0 HLTGEFEK LVGDGGTGKTTFVKRHLTGEFEKKYVATLG KTTFVKRHLTGEFEKKYVATLGVEVHPLVF R H L E K K 0 0 0 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 8 0 959.47125 P62826 P62826 30 37 RAN GTP-binding nuclear protein Ran yes yes 2 0.012568 107.9 By MS/MS 8 0 1 1 2350200 2350200 0 5855 1172 6041 14482 11824 11824 1 29671 0 HLTGEFEKK LVGDGGTGKTTFVKRHLTGEFEKKYVATLG TTFVKRHLTGEFEKKYVATLGVEVHPLVFH R H L K K Y 0 0 0 0 0 0 2 1 1 0 1 2 0 1 0 0 1 0 0 0 0 0 9 1 1087.5662 P62826 P62826 30 38 RAN GTP-binding nuclear protein Ran yes yes 2;3 0.00048959 146.79 By MS/MS 8.5 0.5 2 2 4 7254600 7254600 0 5856 1172 6042 14483;14484;14485;14486 11825;11826 11825 2 117760 0 HLTHAQSTLDAK LWLVLPGVLVLDAVKHLTHAQSTLDAKATK AVKHLTHAQSTLDAKATKAKSKKN______ K H L A K A 2 0 0 1 0 1 0 0 2 0 2 1 0 0 0 1 2 0 0 0 0 0 12 0 1320.6786 Q15125 Q15125 210 221 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 2;3 5.6446E-18 227.36 By MS/MS 3.86 3.31 2 2 1 2 7 5150200 5150200 0 5857 1491 6043 14487;14488;14489;14490;14491;14492;14493 11827;11828;11829;11830;11831 11831 5 328700 0 HLTHENVQR EAQIYEYVEILGEQRHLTHENVQRKQARTG ILGEQRHLTHENVQRKQARTGEEREEEEEE R H L Q R K 0 1 1 0 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1132.5738 Q12874 Q12874 339 347 SF3A3 Splicing factor 3A subunit 3 yes yes 2 1.165E-07 199.7 By MS/MS 6 0 1 1 352290 352290 0 5858 1335 6044 14494 11832 11832 1 2421.7 0 HLTPVTLELGGK GNTAVGKIVMEAAAKHLTPVTLELGGKSPC AAKHLTPVTLELGGKSPCYIDKDCDLDIVC K H L G K S 0 0 0 0 0 0 1 2 1 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1263.7187 P51648;P48448;P43353 P51648 200 211 ALDH3A2;ALDH3B2;ALDH3B1 Fatty aldehyde dehydrogenase;Aldehyde dehydrogenase family 3 member B2;Aldehyde dehydrogenase family 3 member B1 no no 2 0.0085851 93.096 By MS/MS 7.5 1.12 1 1 1 1 4 10440000 10440000 0 5859 1002 6045 14495;14496;14497;14498 11833 11833 1 81888 0 HLTQAVCTVK KQPDAVHNIYRQGCKHLTQAVCTVKSTDSC RQGCKHLTQAVCTVKSTDSCLFFIKCFDDT K H L V K S 1 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 2 0 0 2 0 0 10 0 1155.607 Q9BXW6 Q9BXW6 283 292 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 0.025938 93.598 By MS/MS 4 0 1 1 0 0 0 5860 2360 6046 14499 11834 11834 1 0 0 HLTSNSPR KPAIVEAGGMQALGKHLTSNSPRLVQNCLW GMQALGKHLTSNSPRLVQNCLWTLRNLSDV K H L P R L 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 0 0 8 0 910.46208 P14923 P14923 360 367 JUP Junction plakoglobin yes yes 2 0.024873 109.01 By MS/MS By MS/MS 5.2 2.93 1 1 2 1 2 1 1 1 3 7 4206700 746690 3460000 5861 621 6047 14500;14501;14502;14503;14504;14505;14506;14507;14508;14509 11835;11836;11837;11838;11839 11836 5 26057 1295900 HLTYENVER YRGAVGALLVYDIAKHLTYENVERWLKELR VYDIAKHLTYENVERWLKELRDHADSNIVI K H L E R W 0 1 1 0 0 0 2 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 9 0 1159.5622 P62491;Q15907 P62491 96 104 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0014259 128.6 By MS/MS 8.5 0.5 1 1 2 2328500 2328500 0 5862 1161 6048 14510;14511 11840;11841 11841 2 39577 0 HLVAGGGAGAVSR DEFTVEERQTGMWWRHLVAGGGAGAVSRTC WRHLVAGGGAGAVSRTCTAPLDRLKVLMQV R H L S R T 3 1 0 0 0 0 0 4 1 0 1 0 0 0 0 1 0 0 0 2 0 0 13 0 1150.6207 Q6KCM7 Q6KCM7 189 201 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 2 0.011492 105.4 By MS/MS 6.5 0.5 1 1 2 1860900 1860900 0 5863 1685 6049 14512;14513 11842 11842 1 18882 0 HLVDEPQNLIK DDPHACYSTVFDKLKHLVDEPQNLIKQNCD DKLKHLVDEPQNLIKQNCDQFEKLGEYGFQ K H L I K Q 0 0 1 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1304.7089 CON__P02769 CON__P02769 402 412 yes yes 2 0.0001826 144.65 By MS/MS 6.5 1.12 1 1 1 1 4 13506000 13506000 0 + 5864 43 6050 14514;14515;14516;14517 11843;11844;11845 11844 3 117890 0 HLVDPIDDLFLAAK AADGNYYNARKMNIKHLVDPIDDLFLAAKK KHLVDPIDDLFLAAKKIPGISSTGVGDGGN K H L A K K 2 0 0 3 0 0 0 0 1 1 3 1 0 1 1 0 0 0 0 1 0 0 14 0 1565.8453 Q7Z3D6 Q7Z3D6 455 468 C14orf159 UPF0317 protein C14orf159, mitochondrial yes yes 2 0.0001291 155 By MS/MS 6 0 1 1 450490 450490 0 5865 1782 6051 14518 11846 11846 1 3096.8 0 HLVGVCYTEDEAK QVCASCHSMDFVAYRHLVGVCYTEDEAKEL YRHLVGVCYTEDEAKELAAEVEVQDGPNED R H L A K E 1 0 0 1 1 0 2 1 1 0 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1519.6977 P08574 P08574 134 146 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 2.1654E-11 203.02 By MS/MS 9 0 1 1 0 0 0 5866 525 6052 14519 11847 11847 1 0 0 HLVSPEALDLLDK HSRKRWENFIHSENRHLVSPEALDLLDKLL NRHLVSPEALDLLDKLLRYDHQQRLTAKEA R H L D K L 1 0 0 2 0 0 1 0 1 0 4 1 0 0 1 1 0 0 0 1 0 0 13 0 1448.7875 P19784 P19784 292 304 CSNK2A2 Casein kinase II subunit alpha yes yes 2 0.00081076 129.82 By MS/MS 7 0 1 1 587590 587590 0 5867 665 6053 14520 11848 11848 1 9224.1 0 HLVYESDQNKDGK WILPSDYDHAEAEARHLVYESDQNKDGKLT ARHLVYESDQNKDGKLTKEEIVDKYDLFVG R H L G K L 0 0 1 2 0 1 1 1 1 0 1 2 0 0 0 1 0 0 1 1 0 0 13 1 1531.7267 O43852 O43852 272 284 CALU Calumenin yes yes 3 0.013303 114.87 By MS/MS 7 0 1 1 1830000 1830000 0 5868 243 6054 14521 11849 11849 1 28728 0 HMQLYCDR LQELPDAVPHGEMPRHMQLYCDRYLCDKVV PHGEMPRHMQLYCDRYLCDKVVPGNRVTIM R H M D R Y 0 1 0 1 1 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 8 0 1121.4746 P33992 P33992 244 251 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.015054 105.14 By MS/MS 4 0 1 1 306220 306220 0 5869 807 6055 14522 11850 11850 1 28818 0 HNDMADLER QKGLQASRSDIKLFKHNDMADLERLLKEQE DIKLFKHNDMADLERLLKEQEIEDQKNPRK K H N E R L 1 1 1 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 9 0 1099.4717 O15269 O15269 211 219 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.00010948 160.36 By MS/MS 6 0 1 1 4919600 4919600 0 5870 177 6056 14523 11851 11851 1 33818 0 HNEETGDNVGPLIIK WRSKKFPFCDGAHTKHNEETGDNVGPLIIK HNEETGDNVGPLIIKKKET___________ K H N I K K 0 0 2 1 0 0 2 2 1 2 1 1 0 0 1 0 1 0 0 1 0 0 15 0 1634.8264 Q9NZ45 Q9NZ45 90 104 CISD1 CDGSH iron-sulfur domain-containing protein 1 yes yes 2 3.6102E-05 195.72 By MS/MS 10 0 1 1 1589500 1589500 0 5871 2645 6057 14524 11852;11853 11853 2 85668 0 HNELTGDNVGPLILK WRSKTFPACDGSHNKHNELTGDNVGPLILK HNELTGDNVGPLILKKKEV___________ K H N L K K 0 0 2 1 0 0 1 2 1 1 3 1 0 0 1 0 1 0 0 1 0 0 15 0 1618.8679 Q8N5K1 Q8N5K1 117 131 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 3 0.019912 113.25 By MS/MS 10 0 1 1 303160 303160 0 5872 1923 6058 14525 11854 11854 1 16339 0 HNESVVK WMEGLTLQDYSEHCKHNESVVKEMLELAKN QDYSEHCKHNESVVKEMLELAKNYNKAVEE K H N V K E 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 7 0 811.41882 O00487 O00487 240 246 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 2 0.013192 127.12 By MS/MS By matching 6.75 0.829 2 1 1 3 1 4035900 4030300 5633.9 5873 110 6059 14526;14527;14528;14529 11855 11855 1 39280 5773.2 HNIQALLK EEARSLRECELYVQKHNIQALLKDSIVQLC CELYVQKHNIQALLKDSIVQLCTARPERPM K H N L K D 1 0 1 0 0 1 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 935.55525 P10644 P10644 25 32 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 0.0014715 148.33 By MS/MS 6.5 0.5 1 1 2 3095500 3095500 0 5874 567 6060 14530;14531 11856 11856 1 25794 0 HNKPEVEVR AALCLENFSSQVVERHNKPEVEVRSSKELL SQVVERHNKPEVEVRSSKELLLQPVTISRN R H N V R S 0 1 1 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1106.5833 P59998 P59998 33 41 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 3 0.00075712 131.52 By MS/MS 9.5 0.5 1 1 2 2579000 2579000 0 5875 1088 6061 14532;14533 11857;11858 11857 2 64517 0 HNLEIIK FLMKHVFHPKRAVFRHNLEIIKTLVECWKD HPKRAVFRHNLEIIKTLVECWKDCLSIPYR R H N I K T 0 0 1 0 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 7 0 865.50215 P78527 P78527 2233 2239 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.034145 101.6 By MS/MS 1.5 0.5 1 1 2 3684100 3684100 0 5876 1225 6062 14534;14535 11859 11859 1 1126800 0 HNPTVTGHQEQTYLQK GQLNRYSSRNFPAERHNPTVTGHQEQTYLQ NPTVTGHQEQTYLQKETSTLQVEQNGDYGR R H N Q K E 0 0 1 0 0 3 1 1 2 0 1 1 0 0 1 0 3 0 1 1 0 0 16 0 1879.9177 Q71RC2 Q71RC2 413 428 LARP4 La-related protein 4 yes yes 3 0.0003716 132.24 By MS/MS 5 0.816 1 1 1 3 2929400 2929400 0 5877 1750 6063 14536;14537;14538 11860;11861 11860 2 210930 0 HNRLEER EEKLKQFEERLAEERHNRLEERKRQRKEER EERLAEERHNRLEERKRQRKEERRITYYRE R H N E R K 0 2 1 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 952.48388 Q14152 Q14152 788 794 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.050563 129.68 By MS/MS 4 2 1 1 1 1 1 1 1 7 15675000 15675000 0 5878 1422 6064 14539;14540;14541;14542;14543;14544;14545 11862 11862 1 604430 0 HNTAVSQLTK KMDVAQSELDIYLSRHNTAVSQLTKAKEAL IYLSRHNTAVSQLTKAKEALIAASETLKER R H N T K A 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 1 2 0 0 1 0 0 10 0 1097.5829 Q9NTJ3 Q9NTJ3 513 522 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 1.1868E-05 173.24 By MS/MS 2.5 1.12 1 1 1 1 4 3062200 3062200 0 5879 2575 6065 14546;14547;14548;14549 11863;11864 11864 2 174840 0 HNTPEDAK RIIFDDFREAYYWLRHNTPEDAKVMSWWDY EAYYWLRHNTPEDAKVMSWWDYGYQITAMA R H N A K V 1 0 1 1 0 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 8 0 910.41446 P46977 P46977 514 521 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.011474 109.11 By MS/MS 1.5 0.5 1 1 2 294140 294140 0 5880 923 6066 14550;14551 11865 11865 1 98375 0 HPAATAQLETAVR KLRLLGLRYQEYVTRHPAATAQLETAVRGF TRHPAATAQLETAVRGFSYLLAGRFADSHE R H P V R G 4 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 2 0 0 1 0 0 13 0 1363.7208 Q9Y5Y5 Q9Y5Y5 18 30 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.0085868 92.943 By MS/MS 7 0 1 1 818080 818080 0 5881 2928 6067 14552 11866 11866 1 12842 0 HPDVEVDGFSELR WYHFSCFWKVGHSIRHPDVEVDGFSELRWD IRHPDVEVDGFSELRWDDQQKVKKTAEAGG R H P L R W 0 1 0 2 0 0 2 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 13 0 1498.7052 P09874 P09874 66 78 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.0013224 116.24 By MS/MS 3.67 0.471 1 2 3 3388800 3388800 0 5882 543 6068 14553;14554;14555 11867;11868 11868 2 310950 0 HPEAEMAQNSVR ITEPAVCALRHLTSRHPEAEMAQNSVRLNY TSRHPEAEMAQNSVRLNYGIPAIVKLLNQP R H P V R L 2 1 1 0 0 1 2 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 12 0 1367.6252 P14923 P14923 466 477 JUP Junction plakoglobin yes yes 3 0.0024504 119.74 By matching By MS/MS 3.5 0.5 1 1 1 1 470940 266560 204380 5883 621 6069 14556;14557 11869 11869 295 1 25085 26015 HPELADK KEGVMVAKKDVHMPKHPELADKNVPNLHVM KKDVHMPKHPELADKNVPNLHVMKAMQSLK K H P D K N 1 0 0 1 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 7 0 808.40792 P46783;Q9NQ39 P46783 32 38 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 0.0078668 143.85 By MS/MS 9 0.816 1 1 1 3 11671000 11671000 0 5884 920 6070 14558;14559;14560 11870;11871 11870 2 254940 0 HPELADKNVPNLHVMK KEGVMVAKKDVHMPKHPELADKNVPNLHVM PELADKNVPNLHVMKAMQSLKSRGYVKEQF K H P M K A 1 0 2 1 0 0 1 0 2 0 2 2 1 0 2 0 0 0 0 2 0 0 16 1 1840.9618 P46783;Q9NQ39 P46783 32 47 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 4 0.0034327 93.228 By MS/MS 9.5 0.5 1 1 2 2024100 2024100 0 5885 920 6071 14561;14562 11872 11872 484 1 46866 0 HPGSFDVVHVK GANLGRIGVITNRERHPGSFDVVHVKDANG NRERHPGSFDVVHVKDANGNSFATRLSNIF R H P V K D 0 0 0 1 0 0 0 1 2 0 0 1 0 1 1 1 0 0 0 3 0 0 11 0 1220.6302 P62701;P22090 P62701 201 211 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.0010643 152.54 By MS/MS 8.75 0.829 2 1 1 4 15970000 15970000 0 5886 1165 6072 14563;14564;14565;14566 11873;11874;11875 11874 3 223790 0 HPHDIIDDINSGAVECPAS ILGTAQSVGCNVDGRHPHDIIDDINSGAVE IIDDINSGAVECPAS_______________ R H P A S - 2 0 1 3 1 0 1 1 2 3 0 0 0 0 2 2 0 0 0 1 0 0 19 0 2045.9113 P30050 P30050 147 165 RPL12 60S ribosomal protein L12 yes yes 2 0.00017559 159.12 By MS/MS 9 0 1 1 343830 343830 0 5887 766 6073 14567 11876 11876 1 6766.7 0 HPQPGAVELAAK SVQTMSCYADVVVLRHPQPGAVELAAKHCR VLRHPQPGAVELAAKHCRRPVINAGDGVGE R H P A K H 3 0 0 0 0 1 1 1 1 0 1 1 0 0 2 0 0 0 0 1 0 0 12 0 1216.6564 P27708 P27708 2025 2036 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.000799 128.91 By MS/MS 1.5 0.5 1 1 2 1823400 1823400 0 5888 745 6074 14568;14569 11877;11878 11878 2 586480 0 HPSKPDPSGECNPDLR TKTPSSDVLVFDYTKHPSKPDPSGECNPDL PSKPDPSGECNPDLRLRGHQKEGYGLSWNP K H P L R L 0 1 1 2 1 0 1 1 1 0 1 1 0 0 4 2 0 0 0 0 0 0 16 1 1804.8162 Q09028 Q09028 157 172 RBBP4 Histone-binding protein RBBP4 yes yes 3 0.019763 74.89 By MS/MS 6 0 1 1 1063100 1063100 0 5889 1318 6075 14570 11879 11879 1 7308.3 0 HPSTNSLLR AEREISKMKPSVAPRHPSTNSLLREQISLY PSVAPRHPSTNSLLREQISLYPEVKGEIAR R H P L R E 0 1 1 0 0 0 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 9 0 1023.5461 Q9P032 Q9P032 33 41 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.01668 90.37 By MS/MS 9 0 1 1 8683000 8683000 0 5890 2660 6076 14571 11880 11880 1 170880 0 HQATGELDDAK LDNLQAKGKERQWLRHQATGELDDAKIIDG QWLRHQATGELDDAKIIDGLTGEKAIYKRR R H Q A K I 2 0 0 2 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 11 0 1183.5469 A3KMH1 A3KMH1 1673 1683 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00082719 145.28 By MS/MS 2 0 1 1 469730 469730 0 5891 14 6077 14572 11881 11881 1 158880 0 HQDQAVTSSAHHR HSEHKKLQKVQATEKHQDQAVTSSAHHRGG EKHQDQAVTSSAHHRGGHGVPHGKLLKQKS K H Q H R G 2 1 0 1 0 2 0 0 3 0 0 0 0 0 0 2 1 0 0 1 0 0 13 0 1472.6869 Q5SW79 Q5SW79 419 431 CEP170 Centrosomal protein of 170 kDa yes yes 3 1.8982E-05 187.62 By MS/MS 2 0 1 1 103230 103230 0 5892 1623 6078 14573 11882 11882 1 34917 0 HQDVATR AMAIDTLLISDELFRHQDVATRSRYVRLVD LISDELFRHQDVATRSRYVRLVDSVKENAG R H Q T R S 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 7 0 825.40931 Q9BRX2 Q9BRX2 320 326 PELO Protein pelota homolog yes yes 2 0.01306 127.46 By MS/MS 7.5 0.5 1 1 2 1383800 1383800 0 5893 2301 6079 14574;14575 11883 11883 1 21550 0 HQDVPSQDDSKPTQR HHFVAVALRKPDGSRHQDVPSQDDSKPTQR HQDVPSQDDSKPTQRQFTILNFNDLMSSAV R H Q Q R Q 0 1 0 3 0 3 0 0 1 0 0 1 0 0 2 2 1 0 0 1 0 0 15 1 1736.8078 Q9NRN7 Q9NRN7 253 267 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 3 0.0003342 162.29 By MS/MS 7.5 0.5 1 1 2 2596800 2596800 0 5894 2556 6080 14576;14577 11884 11884 1 39734 0 HQEGEIFDTEK LTDAYFKKKKLRKPRHQEGEIFDTEKEKYE RKPRHQEGEIFDTEKEKYEITEQRKIDQKA R H Q E K E 0 0 0 1 0 1 3 1 1 1 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1331.5994 Q02878 Q02878 227 237 RPL6 60S ribosomal protein L6 yes yes 2 1.7182E-09 218.55 By MS/MS By MS/MS 7 0 2 1 1 2670800 2549300 121510 5895 1281 6081 14578;14579 11885;11886 11886 2 40019 218840 HQEGEIFDTEKEK LTDAYFKKKKLRKPRHQEGEIFDTEKEKYE PRHQEGEIFDTEKEKYEITEQRKIDQKAVD R H Q E K Y 0 0 0 1 0 1 4 1 1 1 0 2 0 1 0 0 1 0 0 0 0 0 13 1 1588.7369 Q02878 Q02878 227 239 RPL6 60S ribosomal protein L6 yes yes 3 0.0036224 101.45 By MS/MS 7 0 1 1 1714400 1714400 0 5896 1281 6082 14580 11887 11887 1 26913 0 HQEGEIFDTEKEKYEITEQR LTDAYFKKKKLRKPRHQEGEIFDTEKEKYE IFDTEKEKYEITEQRKIDQKAVDSQILPKI R H Q Q R K 0 1 0 1 0 2 6 1 1 2 0 2 0 1 0 0 2 0 1 0 0 0 20 2 2508.1769 Q02878 Q02878 227 246 RPL6 60S ribosomal protein L6 yes yes 4 0.0068031 71.969 By MS/MS 7 0 1 1 3137500 3137500 0 5897 1281 6083 14581 11888 11888 1 49253 0 HQEHILR ERLERQHWTMTKIQKHQEHILRFASWALES WTMTKIQKHQEHILRFASWALESDNNTALL K H Q L R F 0 1 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 931.4988 Q13263 Q13263 341 347 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.038234 98.523 By MS/MS 4.5 0.5 1 1 2 1450300 1450300 0 5898 1367 6084 14582;14583 11889 11889 1 124460 0 HQGTFTDEK IDLKLANKLKDIIKRHQGTFTDEKSKASHH KDIIKRHQGTFTDEKSKASHHIYPYSSSQD R H Q E K S 0 0 0 1 0 1 1 1 1 0 0 1 0 1 0 0 2 0 0 0 0 0 9 0 1061.4778 Q92922 Q92922 191 199 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.027094 85.862 By MS/MS 5 2.16 1 1 1 3 1410600 1410600 0 5899 2079 6085 14584;14585;14586 11890;11891 11890 2 37767 0 HQGVMVGMGQK DAPRAVFPSIVGRPRHQGVMVGMGQKDSYV GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL R H Q Q K D 0 0 0 0 0 2 0 3 1 0 0 1 2 0 0 0 0 0 0 2 0 0 11 0 1170.5638 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P63261 40 50 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2 0.0011855 117.89 By MS/MS 7 0 2 2 1482900 1482900 0 5900 1095;1203;1594 6086;6087 14587;14588 11892;11893 11893 617 2 23279 0 HQGYTER GCAYRSLQTICSWFKHQGYTERSIPTHREI QTICSWFKHQGYTERSIPTHREIQQALVDA K H Q E R S 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 7 0 889.40423 Q9NUQ7 Q9NUQ7 316 322 UFSP2 Ufm1-specific protease 2 yes yes 2 0.030472 104.37 By MS/MS 6 0 1 1 1487600 1487600 0 5901 2585 6088 14589 11894 11894 1 10226 0 HQKPAGAPATK AATVSASTSNIIPPRHQKPAGAPATKKKQQ IPPRHQKPAGAPATKKKQQQKKKKGGKGGW R H Q T K K 3 0 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 0 0 11 1 1104.604 O76094 O76094 646 656 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.00066173 148.91 By MS/MS 5 0 1 1 690650 690650 0 5902 362 6089 14590 11895 11895 1 6926.8 0 HQLQEASR SQKDLENLKAEVARRHQLQEASRNRDRAEE KAEVARRHQLQEASRNRDRAEEPMATEPAP R H Q S R N 1 1 0 0 0 2 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 8 0 967.48354 O75153 O75153 1264 1271 CLUH Clustered mitochondria protein homolog yes yes 2 0.006969 116.37 By MS/MS 3 0 1 1 199530 199530 0 5903 300 6090 14591 11896 11896 1 3650.9 0 HQLSKDGQK TPEKAIKLAANDFFRHQLSKDGQKLTLLKE ANDFFRHQLSKDGQKLTLLKEMLAGCGAGT R H Q Q K L 0 0 0 1 0 2 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1039.5411 Q9H936 Q9H936 92 100 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 3 0.015217 94.309 By MS/MS 8 0 1 1 20932 20932 0 5904 2480 6091 14592 11897 11897 1 264.27 0 HQNLQEK SEKQLAAELDLVLQRHQNLQEKLAEEMLGL ELDLVLQRHQNLQEKLAEEMLGLARSLKTN R H Q E K L 0 0 1 0 0 2 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 895.45118 Q9NZ43 Q9NZ43 165 171 USE1 Vesicle transport protein USE1 yes yes 2 0.010617 133.81 By MS/MS 8 0 1 1 519520 519520 0 5905 2644 6092 14593 11898 11898 1 6558.9 0 HQNVQLPR GHKLHGKPIRITLSKHQNVQLPREGQEDQG IRITLSKHQNVQLPREGQEDQGLTKDYGNS K H Q P R E 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 990.53591 P26599 P26599 411 418 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 0.021104 98.418 By MS/MS 6 0 1 1 1887700 1887700 0 5906 733 6093 14594 11899 11899 1 12977 0 HQSDRYVK VKPKIVKKRTKKFIRHQSDRYVKIKRNWRK RTKKFIRHQSDRYVKIKRNWRKPRGIDNRV R H Q V K I 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 1 0 0 8 1 1031.5148 P62910 P62910 23 30 RPL32 60S ribosomal protein L32 yes yes 3 0.040209 77.318 By MS/MS 9 0 1 1 450400 450400 0 5907 1185 6094 14595 11900 11900 1 8864 0 HQSHLQAK SLMHDVYGMLLNLEKHQSHLQAKSLLPEKT MLLNLEKHQSHLQAKSLLPEKTVTRDVIGS K H Q A K S 1 0 0 0 0 2 0 0 2 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 947.49371 P82933 P82933 175 182 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 0.00178 145.34 By MS/MS 7.33 0.471 2 1 3 2081100 2081100 0 5908 1239 6095 14596;14597;14598 11901;11902 11902 2 32469 0 HQVQLLGR SEDTSIDYNPLYKERHQVQLLGRGFIAGID NPLYKERHQVQLLGRGFIAGIDLKQQKREQ R H Q G R G 0 1 0 0 0 2 0 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 949.54575 Q9BUQ8 Q9BUQ8 294 301 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0051944 124.59 By MS/MS 4.5 0.5 1 1 2 1221300 1221300 0 5909 2326 6096 14599;14600 11903 11903 1 93406 0 HRAQVIYTR LQELLSKGLIKLVSKHRAQVIYTRNTKGGD IKLVSKHRAQVIYTRNTKGGDAPAAGEDA_ K H R T R N 1 2 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 1 0 0 9 1 1142.6309 P62851 P62851 103 111 RPS25 40S ribosomal protein S25 yes yes 3 0.0015116 147.4 By MS/MS By matching 9.33 0.471 2 1 2 1 2698400 2667100 31289 5910 1176 6097 14601;14602;14603 11904;11905 11905 2 75932 71348 HREEIGNR VQFEEPEMANQALLKHREEIGNRYIEIFPS ANQALLKHREEIGNRYIEIFPSRRNEVRTH K H R N R Y 0 2 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1009.5053 Q12849 Q12849 310 317 GRSF1 G-rich sequence factor 1 yes yes 2;3 0.0074703 119.41 By MS/MS 6.33 0.471 2 1 3 3619400 3619400 0 5911 1334 6098 14604;14605;14606 11906;11907 11906 2 25954 0 HRELFLSR SKQPGVSEQQRHQLKHRELFLSRQFESLPA QQRHQLKHRELFLSRQFESLPATHIRGKCS K H R S R Q 0 2 0 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 8 1 1056.5829 Q13330;Q9BTC8;O94776 O94776 85 92 MTA1;MTA3;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3;Metastasis-associated protein MTA2 no no 3 0.0027836 128.28 By MS/MS 5 0 1 1 634410 634410 0 5912 365;1371 6099 14607 11908 11908 1 6362.8 0 HRLNPENR TYPLQTVQSILRFGRHRLNPENRTLGSLRN SILRFGRHRLNPENRTLGSLRNILYLLHQR R H R N R T 0 2 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 8 1 1034.537 O43808 O43808 235 242 SLC25A17 Peroxisomal membrane protein PMP34 yes yes 3 0.0084593 107.01 By MS/MS 1 0 1 1 58950 58950 0 5913 236 6100 14608 11909 11909 1 14205 0 HRPQLLVER TPEQIEEAVEAAINRHRPQLLVERYHFNMG EAAINRHRPQLLVERYHFNMGLLMGEARAV R H R E R Y 0 2 0 0 0 1 1 0 1 0 2 0 0 0 1 0 0 0 0 1 0 0 9 1 1146.6622 P47897 P47897 133 141 QARS Glutamine--tRNA ligase yes yes 3 0.00024304 150.27 By MS/MS 5 0.816 1 1 1 3 2791000 2791000 0 5914 928 6101 14609;14610;14611 11910;11911 11910 2 160550 0 HRPVEPER PGAFQPPPKPVIVDKHRPVEPERRFLSPEF KPVIVDKHRPVEPERRFLSPEFIPRRGRTD K H R E R R 0 2 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 8 1 1018.5308 P49406 P49406 66 73 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 3 0.02759 118.74 By MS/MS 8 0 1 1 1408800 1408800 0 5915 948 6102 14612 11912 11912 1 17786 0 HSCDALNR VPVPNMTPSGVGRERHSCDALNRWLGEQLK SGVGRERHSCDALNRWLGEQLKQLVPASGL R H S N R W 1 1 1 1 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 8 0 971.42431 Q6P996 Q6P996 423 430 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 0.021009 98.523 By MS/MS 4 0 1 1 765980 765980 0 5916 1715 6103 14613 11913 11913 1 72084 0 HSEAATAQR SKNEEDEGHSNSSPRHSEAATAQREEWKMF SNSSPRHSEAATAQREEWKMFIGGLSWDTT R H S Q R E 3 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 9 0 969.46281 Q14103 Q14103 86 94 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 2.4341E-05 176.44 By MS/MS 7 0 1 1 571310 571310 0 5917 1419 6104 14614 11914 11914 1 8968.5 0 HSELLQK EPKTRAGGFASALERHSELLQKVEPLQKGS GFASALERHSELLQKVEPLQKGSPKNVESF R H S Q K V 0 0 0 0 0 1 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 853.46577 Q9Y2Q9 Q9Y2Q9 59 65 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.017677 115.46 By MS/MS By matching 9.33 0.471 2 1 2 1 10263000 10202000 60946 5918 2838 6105 14615;14616;14617 11915 11915 1 206770 138980 HSELLQKVEPLQK EPKTRAGGFASALERHSELLQKVEPLQKGS ERHSELLQKVEPLQKGSPKNVESFASMLRH R H S Q K G 0 0 0 0 0 2 2 0 1 0 3 2 0 0 1 1 0 0 0 1 0 0 13 1 1547.8671 Q9Y2Q9 Q9Y2Q9 59 71 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2;3 7.1013E-17 266.93 By MS/MS 9.33 0.471 2 1 3 11376000 11376000 0 5919 2838 6106 14618;14619;14620 11916;11917 11917 2 232430 0 HSEVQQANLK PAMSMDANGKIIWAKHSEVQQANLKAMGDA IIWAKHSEVQQANLKAMGDAEIKDGERLPL K H S L K A 1 0 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1152.5887 P35606 P35606 319 328 COPB2 Coatomer subunit beta yes yes 2 1.7591E-10 209.19 By MS/MS 3 1.41 1 1 1 1 1 5 8064700 8064700 0 5920 826 6107 14621;14622;14623;14624;14625 11918;11919;11920;11921;11922 11918 5 1594500 0 HSGASAEVQK KKAYRKRALMHHPDRHSGASAEVQKEEEKK HHPDRHSGASAEVQKEEEKKFKEVGEAFTI R H S Q K E 2 0 0 0 0 1 1 1 1 0 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1012.4938 Q99615 Q99615 413 422 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.04205 76.17 By MS/MS 6 0 1 1 445760 445760 0 5921 2253 6108 14626 11923 11923 1 3064.2 0 HSGDYFTLLR LLFTVLGSTARERAKHSGDYFTLLRHLLNY RERAKHSGDYFTLLRHLLNYAYNSNINVPN K H S L R H 0 1 0 1 0 0 0 1 1 0 2 0 0 1 0 1 1 0 1 0 0 0 10 0 1207.5986 Q93008 Q93008 1371 1380 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.026075 83.883 By MS/MS 2 0 1 1 744830 744830 0 5922 2085 6109 14627 11924 11924 1 251930 0 HSGEATNTVTK HNLDAFVRLIALLVKHSGEATNTVTKINLL LLVKHSGEATNTVTKINLLNKVLGIVVGVL K H S T K I 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 3 0 0 1 0 0 11 0 1143.552 A5YKK6 A5YKK6 1949 1959 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00015231 147.3 By MS/MS 2 0 1 1 492760 492760 0 5923 19 6110 14628 11925 11925 1 166670 0 HSLASSEYPVR SDPKLAVLITNSNVRHSLASSEYPVRRRQC SNVRHSLASSEYPVRRRQCEEVARALGKES R H S V R R 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 3 0 0 1 1 0 0 11 0 1244.6149 P51570 P51570 229 239 GALK1 Galactokinase yes yes 2 0.00011227 150.81 By MS/MS 7 0 1 1 614490 614490 0 5924 997 6111 14629 11926 11926 1 9646.4 0 HSLDASQGTATGPR LRFRLSPAARNILEKHSLDASQGTATGPRG KHSLDASQGTATGPRGIFTKEDALKLVQLK K H S P R G 2 1 0 1 0 1 0 2 1 0 1 0 0 0 1 2 2 0 0 0 0 0 14 0 1396.6695 O00330 O00330 195 208 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 2 0.030661 78.964 By MS/MS 6 0 1 1 1238600 1238600 0 5925 101 6112 14630 11927 11927 0 8514.6 0 HSLDQDLLR ELQCRQYKRKMLLARHSLDQDLLREDLNKK KMLLARHSLDQDLLREDLNKKQTQKDLECA R H S L R E 0 1 0 2 0 1 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1095.5673 Q9UL54 Q9UL54 655 663 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.013187 94.85 By MS/MS 3 0 1 1 479320 479320 0 5926 2770 6113 14631 11928 11928 1 8770.2 0 HSLSLLDLEQK IKQAVQKVLGSVSLKHSLSLLDLEQKLKEI VSLKHSLSLLDLEQKLKEIRNLVEQHKSSS K H S Q K L 0 0 0 1 0 1 1 0 1 0 4 1 0 0 0 2 0 0 0 0 0 0 11 0 1281.6929 P56589 P56589 198 208 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 1.651E-05 167.12 By MS/MS 7 0 1 1 1181400 1181400 0 5927 1075 6114 14632 11929 11929 1 18545 0 HSMDQTGSK KNESELEAHLCRMMKHSMDQTGSKSDKETE LCRMMKHSMDQTGSKSDKETEKGASRIDEK K H S S K S 0 0 0 1 0 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 9 0 989.42364 Q14008 Q14008 1800 1808 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.031714 83.862 By MS/MS 2 0 1 1 136370 136370 0 5928 1417 6115 14633 11930 11930 1 46128 0 HSPDTAEGQLKEDR ELERILAPYTDFHYRHSPDTAEGQLKEDRE RHSPDTAEGQLKEDREARFLASKMGIIATF R H S D R E 1 1 0 2 0 1 2 1 1 0 1 1 0 0 1 1 1 0 0 0 0 0 14 1 1581.7383 Q6R327 Q6R327 264 277 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.00098749 115.12 By MS/MS 2 0 1 1 635140 635140 0 5929 1724 6116 14634 11931 11931 1 214830 0 HSPLTQMGPAK KGSPKNVESFASMLRHSPLTQMGPAKDKLV SMLRHSPLTQMGPAKDKLVIGRIFHIVEND R H S A K D 1 0 0 0 0 1 0 1 1 0 1 1 1 0 2 1 1 0 0 0 0 0 11 0 1165.5914 Q9Y2Q9 Q9Y2Q9 86 96 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.0026726 109.83 By MS/MS 9.5 0.5 1 1 2 963700 963700 0 5930 2838 6117 14635;14636 11932 11932 1182 1 22519 0 HSPLTQMGPAKDK KGSPKNVESFASMLRHSPLTQMGPAKDKLV LRHSPLTQMGPAKDKLVIGRIFHIVENDLY R H S D K L 1 0 0 1 0 1 0 1 1 0 1 2 1 0 2 1 1 0 0 0 0 0 13 1 1408.7133 Q9Y2Q9 Q9Y2Q9 86 98 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.029162 75.669 By MS/MS 9 0 1 1 347140 347140 0 5931 2838 6118 14637 11933 11933 1182 1 6831.8 0 HSQSGQGQSTQTGSR GRQETTHGQTINTTRHSQSGQGQSTQTGSR HSQSGQGQSTQTGSRVTRRRRSSQSENSDS R H S S R V 0 1 0 0 0 4 0 3 1 0 0 0 0 0 0 4 2 0 0 0 0 0 15 0 1544.6928 CON__Q5D862;Q5D862 CON__Q5D862 1249 1263 FLG2 Filaggrin-2 yes no 2 0.010287 109.16 By MS/MS 4 0 1 1 0 0 0 + 5932 67 6119 14638 11934 11934 1 0 0 HSQYHVDGSLEK DHYKAKATRHIFLIRHSQYHVDGSLEKDRT LIRHSQYHVDGSLEKDRTLTPLGREQAELT R H S E K D 0 0 0 1 0 1 1 1 2 0 1 1 0 0 0 2 0 0 1 1 0 0 12 0 1398.6528 Q96HS1 Q96HS1 105 116 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 4.8198E-06 188.27 By MS/MS 8.5 0.5 2 2 4 3519500 3519500 0 5933 2168 6120 14639;14640;14641;14642 11935;11936 11935 2 47511 0 HSQYHVDGSLEKDR DHYKAKATRHIFLIRHSQYHVDGSLEKDRT RHSQYHVDGSLEKDRTLTPLGREQAELTGL R H S D R T 0 1 0 2 0 1 1 1 2 0 1 1 0 0 0 2 0 0 1 1 0 0 14 1 1669.7808 Q96HS1 Q96HS1 105 118 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3;4 0.00030446 155.14 By MS/MS 8.8 0.748 2 2 1 5 27473000 27473000 0 5934 2168 6121 14643;14644;14645;14646;14647 11937;11938;11939 11938 3 363560 0 HSSGQDKPHETYR MENPKESSSSLKTGRHSSGQDKPHETYRLL GRHSSGQDKPHETYRLLKRRNLIIEAVTNL R H S Y R L 0 1 0 1 0 1 1 1 2 0 0 1 0 0 1 2 1 0 1 0 0 0 13 1 1540.7019 Q12789 Q12789 601 613 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.023154 99.844 By MS/MS 2.5 0.5 1 1 2 390590 390590 0 5935 1328 6122 14648;14649 11940 11940 1 115760 0 HSSSVSLSSGK SLRQDYASTSASVSRHSSSVSLSSGKKGTC SVSRHSSSVSLSSGKKGTCSDQEYDQYSLE R H S G K K 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 6 0 0 0 1 0 0 11 0 1074.5306 Q8ND83 Q8ND83 299 309 SLAIN1 SLAIN motif-containing protein 1 yes yes 2 0.035517 77.533 By MS/MS 5 0 1 1 1062500 1062500 0 5936 1956 6123 14650 11941 11941 1 10656 0 HSSVSKEEK KDCAVYVGRMERVARHSSVSKEEKELRMEI MERVARHSSVSKEEKELRMEIAKQELIAHA R H S E K E 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 3 0 0 0 1 0 0 9 1 1029.5091 Q96RT7 Q96RT7 653 661 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 0.03186 106.68 By MS/MS 2 0 1 1 23805 23805 0 5937 2226 6124 14651 11942 11942 1 8051.9 0 HSSWSEGEEHGYSSGHSR EEDEEDTPGHKSGYRHSSWSEGEEHGYSSG WSEGEEHGYSSGHSRGTVKCRHGSNSRRLG R H S S R G 0 1 0 0 0 0 3 3 3 0 0 0 0 0 0 6 0 1 1 0 0 0 18 0 2014.8154 CON__Q5D862;Q5D862 CON__Q5D862 131 148 FLG2 Filaggrin-2 yes no 4 0.0020708 100.43 By MS/MS 3 0 1 1 338610 0 338610 + 5938 67 6125 14652 11943 11943 1 0 43100 HSTCKDSGHAGAR SFEHEFLSKRLSKARHSTCKDSGHAGARDI ARHSTCKDSGHAGARDIVSIQELIEVEEEE R H S A R D 2 1 0 1 1 0 0 2 2 0 0 1 0 0 0 2 1 0 0 0 0 0 13 1 1382.6109 Q14181 Q14181 79 91 POLA2 DNA polymerase alpha subunit B yes yes 3 0.010508 114.76 By MS/MS 5 0 1 1 0 0 0 5939 1428 6126 14653 11944 11944 1 0 0 HSTIVPENAAHQGANR SISNSSSAENDNYCKHSTIVPENAAHQGAN STIVPENAAHQGANRTSSLENHDQMSVNCR K H S N R T 3 1 2 0 0 1 1 1 2 1 0 0 0 0 1 1 1 0 0 1 0 0 16 0 1700.8343 Q9UPY3 Q9UPY3 1124 1139 DICER1 Endoribonuclease Dicer yes yes 3 0.00041688 131.08 By MS/MS 2.5 0.5 1 1 2 538490 538490 0 5940 2803 6127 14654;14655 11945 11945 1 154470 0 HSTLDFMLGAK ______________________________ AAARHSTLDFMLGAKADGETILKGLQSIFQ R H S A K A 1 0 0 1 0 0 0 1 1 0 2 1 1 1 0 1 1 0 0 0 0 0 11 0 1218.6067 P52788 P52788 6 16 SMS Spermine synthase yes yes 2 0.045481 72.325 By MS/MS 7 0 1 1 412440 412440 0 5941 1022 6128 14656 11946 11946 1 6474.5 0 HSVVAGGGGGEGR FRVDPPMGEEGNHKRHSVVAGGGGGEGRKR KRHSVVAGGGGGEGRKRCPSQSSSRPAAMI R H S G R K 1 1 0 0 0 0 1 6 1 0 0 0 0 0 0 1 0 0 0 2 0 0 13 0 1138.5479 Q6PKG0 Q6PKG0 1039 1051 LARP1 La-related protein 1 yes yes 2 5.4128E-05 178.46 By MS/MS 5.67 3.09 1 1 1 3 1476000 1476000 0 5942 1722 6129 14657;14658;14659 11947;11948 11947 2 49062 0 HTGAVLK SHWGNIAVEENVDLKHTGAVLKGPFSRYDY VEENVDLKHTGAVLKGPFSRYDYQRQPDSG K H T L K G 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 0 0 7 0 724.42317 P04843 P04843 252 258 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.054565 88.734 By MS/MS 6 0.816 1 1 1 3 5634700 5634700 0 5943 478 6130 14660;14661;14662 11949 11949 1 55359 0 HTGPNSPDTANDGFVR EVFKSNNVEMDWVLKHTGPNSPDTANDGFV TGPNSPDTANDGFVRLRGLPFGCSKEEIVQ K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 P31943;P55795 P31943 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 3 0.0019919 153.41 By MS/MS 6.5 0.5 1 1 2 3200100 3200100 0 5944 791 6131 14663;14664 11950 11950 1 25274 0 HTGQIGGLK GCGTLVDLCQGPHLRHTGQIGGLKLLSNSS QGPHLRHTGQIGGLKLLSNSSSLWRSSGAP R H T L K L 0 0 0 0 0 1 0 3 1 1 1 1 0 0 0 0 1 0 0 0 0 0 9 0 909.50321 Q9BW92 Q9BW92 247 255 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0079434 104.06 By MS/MS 5.5 1.12 1 1 1 1 4 10152000 10152000 0 5945 2346 6132 14665;14666;14667;14668 11951 11951 1 127010 0 HTLDGAACLLNSNK AHKTPKECPAIDYTRHTLDGAACLLNSNKY RHTLDGAACLLNSNKYFPSRVSIKESSVAK R H T N K Y 2 0 2 1 1 0 0 1 1 0 3 1 0 0 0 1 1 0 0 0 0 0 14 0 1512.7355 Q9Y3A3 Q9Y3A3 127 140 MOB4 MOB-like protein phocein yes yes 2 0.0001527 205.02 By MS/MS 9 0 1 1 415270 415270 0 5946 2861 6133 14669 11952 11952 1 8172.6 0 HTLEQHNWNIEAAVQDR QFQDLTGIESMDQCRHTLEQHNWNIEAAVQ LEQHNWNIEAAVQDRLNEQEGVPSVFNPPP R H T D R L 2 1 2 1 0 2 2 0 2 1 1 0 0 0 0 0 1 1 0 1 0 0 17 0 2059.9824 Q96CS3 Q96CS3 34 50 FAF2 FAS-associated factor 2 yes yes 3 0.00035473 148.7 By MS/MS 6 0 1 1 5802300 5802300 0 5947 2126 6134 14670 11953 11953 1 39887 0 HTLNQIDSVK AAVDYINKHLPRGYKHTLNQIDSVKVWPRR PRGYKHTLNQIDSVKVWPRRPTGEVYDIEI K H T V K V 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1153.6091 CON__P12763 CON__P12763 58 67 yes yes 2 0.00052125 132.88 By MS/MS 6.75 1.48 1 1 1 1 4 13161000 13161000 0 + 5948 49 6135 14671;14672;14673;14674 11954;11955;11956 11956 3 112460 0 HTLQQHQETPK GSPKAQPKPLKHEQKHTLQQHQETPKKKTG HEQKHTLQQHQETPKKKTGYGELNGNAGER K H T P K K 0 0 0 0 0 3 1 0 2 0 1 1 0 0 1 0 2 0 0 0 0 0 11 0 1345.6739 Q7Z417 Q7Z417 79 89 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 3 0.0057509 99.343 By MS/MS 5 0 1 1 491780 491780 0 5949 1789 6136 14675 11957 11957 1 4932.3 0 HTPLVEFEEEESDKRESE TVKKVFYREGAQANRHTPLVEFEEEESDKR LVEFEEEESDKRESE_______________ R H T S E - 0 1 0 1 0 0 7 0 1 0 1 1 0 1 1 2 1 0 0 1 0 0 18 2 2188.976 Q96RQ3 Q96RQ3 708 725 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 3 0.020585 74.726 By MS/MS 5 0 1 1 1653200 1653200 0 5950 2224 6137 14676 11958 11958 1 16580 0 HTQNSSSGQAASSHEQAR GHGHSADSSRKSGTRHTQNSSSGQAASSHE NSSSGQAASSHEQARSSAGERHGSRHQLQS R H T A R S 3 1 1 0 0 3 1 1 2 0 0 0 0 0 0 5 1 0 0 0 0 0 18 0 1881.8314 CON__P20930;P20930 CON__P20930 684 701 FLG Filaggrin yes no 3 6.4555E-07 151.11 By MS/MS 3 0 1 1 0 0 0 + 5951 53 6138 14677 11959 11959 1 0 0 HTQTSSGGQAASSHEQAR GHGHSADSSRQSGTRHTQTSSGGQAASSHE TSSGGQAASSHEQARSSAGERHGSHHQQSA R H T A R S 3 1 0 0 0 3 1 2 2 0 0 0 0 0 0 4 2 0 0 0 0 0 18 0 1838.8256 CON__P20930;P20930 CON__P20930 2630 2647 FLG Filaggrin yes no 3 0.034894 71.286 By MS/MS 4 0.816 1 1 1 3 44876 0 44876 + 5952 53 6139 14678;14679;14680 11960 11960 1 0 37162 HTSALCNSCR CTQAQVLSAATIVAKHTSALCNSCRLASAR TIVAKHTSALCNSCRLASARTTNPTAKRQF K H T C R L 1 1 1 0 2 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1204.5077 Q9Y490 Q9Y490 1501 1510 TLN1 Talin-1 yes yes 2 0.00072654 128.91 By MS/MS 2.5 0.5 1 1 2 986090 986090 0 5953 2888 6140 14681;14682 11961 11961 1 268410 0 HTTSIFDDFSHYEK LEKAKQVLKIIASYKHTTSIFDDFSHYEKR KHTTSIFDDFSHYEKRQEEEESVKKERQGR K H T E K R 0 0 0 2 0 0 1 0 2 1 0 1 0 2 0 2 2 0 1 0 0 0 14 0 1725.7635 Q9Y5A9 Q9Y5A9 549 562 YTHDF2 YTH domain-containing family protein 2 yes yes 3 0.00035024 179.83 By MS/MS 5 0 1 1 1000800 1000800 0 5954 2908 6141 14683 11962 11962 1 10037 0 HTVVVYCDR IPLLFETKKLLKYMKHTVVVYCDRDTQLAR LLKYMKHTVVVYCDRDTQLARLMRRNSLNR K H T D R D 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 3 0 0 9 0 1147.5444 Q8WVC6 Q8WVC6 129 137 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.021746 88.177 By MS/MS 9 0 1 1 2129700 2129700 0 5955 2024 6142 14684 11963 11963 1 41913 0 HVAAGTQQPYTDGVR RLVQLLVKAHQDAQRHVAAGTQQPYTDGVR HVAAGTQQPYTDGVRMEEIVEGCTGALHIL R H V V R M 2 1 0 1 0 2 0 2 1 0 0 0 0 0 1 0 2 0 1 2 0 0 15 0 1598.7801 P14923 P14923 541 555 JUP Junction plakoglobin yes yes 2;3 2.091E-10 224.25 By matching By MS/MS 4.38 3.08 1 1 3 1 1 1 1 7 2073200 206570 1866700 5956 621 6143 14685;14686;14687;14688;14689;14690;14691;14692 11964;11965;11966;11967 11965 4 19440 570740 HVAEDLGK GAATLVDEVGVDVAKHVAEDLGKVFGERFG VGVDVAKHVAEDLGKVFGERFGGGNPELLT K H V G K V 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 867.44503 P40939 P40939 598 605 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.015888 104.21 By MS/MS 5 0 1 1 7215500 7215500 0 5957 865 6144 14693 11968 11968 1 72368 0 HVAEDLGKVFGER GAATLVDEVGVDVAKHVAEDLGKVFGERFG AKHVAEDLGKVFGERFGGGNPELLTQMVSK K H V E R F 1 1 0 1 0 0 2 2 1 0 1 1 0 1 0 0 0 0 0 2 0 0 13 1 1455.747 P40939 P40939 598 610 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 0.00089255 164.9 By MS/MS 5 0 2 2 12068000 12068000 0 5958 865 6145 14694;14695 11969;11970 11970 2 121040 0 HVAEVLEYTK EDKFTKSKTVYSILRHVAEVLEYTKDEQLE YSILRHVAEVLEYTKDEQLESLFQRTAWVF R H V T K D 1 0 0 0 0 0 2 0 1 0 1 1 0 0 0 0 1 0 1 2 0 0 10 0 1187.6186 P05198 P05198 114 123 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.0027028 110.76 By MS/MS 7 0 1 1 1713300 1713300 0 5959 489 6146 14696 11971 11971 1 26896 0 HVANTLSVYR WAVLVCTSRFWFNYRHVANTLSVYRSVKRL WFNYRHVANTLSVYRSVKRLGIPDSHIVLM R H V Y R S 1 1 1 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 1 2 0 0 10 0 1158.6146 Q92643 Q92643 61 70 PIGK GPI-anchor transamidase yes yes 2 0.053685 70.552 By MS/MS 7 0 1 1 1641900 1641900 0 5960 2066 6147 14697 11972 11972 1 25775 0 HVDTGMGLER HNREADGSLQPLPQRHVDTGMGLERLVAVL PLPQRHVDTGMGLERLVAVLQGKHSTYDTD R H V E R L 0 1 0 1 0 0 1 2 1 0 1 0 1 0 0 0 1 0 0 1 0 0 10 0 1113.5237 Q5JTZ9 Q5JTZ9 263 272 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.010303 93.649 By MS/MS 4.5 0.5 1 1 2 819180 819180 0 5961 1613 6148 14698;14699 11973 11973 1 64304 0 HVDYVADQIVTK QISFVNSIATSKGGRHVDYVADQIVTKLVD GGRHVDYVADQIVTKLVDVVKKKNKGGVAV R H V T K L 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 0 1 0 1 3 0 0 12 0 1386.7143 P11388 P11388 325 336 TOP2A DNA topoisomerase 2-alpha yes yes 2 4.3392E-05 169.52 By MS/MS 3 0 1 1 723850 723850 0 5962 578 6149 14700 11974 11974 1 13244 0 HVENYLK KLNSIGNYYKPWFFKHVENYLKTNREGLEY YYKPWFFKHVENYLKTNREGLEYIPLRHYY K H V L K T 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 1 1 0 0 7 0 901.46577 Q15392 Q15392 307 313 DHCR24 Delta(24)-sterol reductase yes yes 2 0.048731 90.777 By MS/MS 1.5 0.5 1 1 2 1251800 1251800 0 5963 1507 6150 14701;14702 11975 11975 1 363040 0 HVESVDKR ______________________________ PLWRCNRHVESVDKRHCSLQAVPEEIYRYS R H V K R H 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 8 1 968.50394 Q14160 Q14160 13 20 SCRIB Protein scribble homolog yes yes 2 0.020705 120.62 By MS/MS 2.5 0.5 1 1 2 201730 201730 0 5964 1425 6151 14703;14704 11976 11976 1 26333 0 HVFTTFYAK STVFHQNDVKIPDAKHVFTTFYAKTKSLLV KIPDAKHVFTTFYAKTKSLLVNPVLFPNRE K H V A K T 1 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 2 0 1 1 0 0 9 0 1112.5655 Q9BUB7 Q9BUB7 207 215 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.0044905 110.12 By MS/MS 9 0 1 1 6874300 6874300 0 5965 2323 6152 14705 11977 11977 1 135290 0 HVLCAYCYEK NNIDVCPECGHLKQKHVLCAYCYEKVCKET HLKQKHVLCAYCYEKVCKETAEIRRQIGKQ K H V E K V 1 0 0 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 2 1 0 0 10 0 1341.5846 Q9BYC8 Q9BYC8 120 129 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 2 0.00011247 153.08 By MS/MS 10 0 1 1 2122600 2122600 0 5966 2366 6153 14706 11978 11978 1 114400 0 HVLDNSGEWSVTK INAQLPLTDKARMARHVLDNSGEWSVTKRQ ARHVLDNSGEWSVTKRQVILLHTELERSLE R H V T K R 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 2 1 1 0 2 0 0 13 0 1470.7103 Q8WVC6 Q8WVC6 174 186 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 6.7802E-08 217.22 By MS/MS 9 0 1 1 572170 572170 0 5967 2024 6154 14707 11979 11979 1 11260 0 HVLDNSGEWSVTKR INAQLPLTDKARMARHVLDNSGEWSVTKRQ RHVLDNSGEWSVTKRQVILLHTELERSLEY R H V K R Q 0 1 1 1 0 0 1 1 1 0 1 1 0 0 0 2 1 1 0 2 0 0 14 1 1626.8114 Q8WVC6 Q8WVC6 174 187 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 3 0.00098597 141.06 By MS/MS 9 0 1 1 940320 940320 0 5968 2024 6155 14708 11980 11980 1 18506 0 HVLEGHDR ITGVDLFGTTDAVVKHVLEGHDRGVNWAAF TTDAVVKHVLEGHDRGVNWAAFHPTMPLIV K H V D R G 0 1 0 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 961.47298 P53621 P53621 199 206 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.0060805 120.49 By MS/MS 3.09 1.5 2 2 3 2 1 1 11 2707600 2707600 0 5969 1034 6156 14709;14710;14711;14712;14713;14714;14715;14716;14717;14718;14719 11981;11982;11983;11984 11984 4 272600 0 HVLTGSADNSCR HTGAVWCVDADWDTKHVLTGSADNSCRLWD DTKHVLTGSADNSCRLWDCETGKQLALLKT K H V C R L 1 1 1 1 1 0 0 1 1 0 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1315.5939 Q13347 Q13347 66 77 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 1.2019E-13 247.22 By MS/MS By MS/MS 8 1.22 4 2 2 6 2 34577000 34456000 120830 5970 1372 6157 14720;14721;14722;14723;14724;14725;14726;14727 11985;11986;11987;11988;11989;11990;11991 11988 7 558830 217600 HVLVTLGEK FDKEGNGTVMGAEIRHVLVTLGEKMTEEEV MGAEIRHVLVTLGEKMTEEEVEMLVAGHED R H V E K M 0 0 0 0 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 994.58113 P60660 P60660 111 119 MYL6 Myosin light polypeptide 6 yes yes 2 0.011034 98.629 By MS/MS 10 0 1 1 2085300 2085300 0 5971 1094 6158 14728 11992 11992 1 112390 0 HVNEDSQEK PRIRRSGLELYAEWKHVNEDSQEKKILLSP LYAEWKHVNEDSQEKKILLSPERVHEIFKR K H V E K K 0 0 1 1 0 1 2 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 9 0 1084.4785 P24928 P24928 204 212 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.011061 98.582 By MS/MS 2 0 1 1 42415 42415 0 5972 717 6159 14729 11993 11993 1 14347 0 HVNEDSQEKK PRIRRSGLELYAEWKHVNEDSQEKKILLSP YAEWKHVNEDSQEKKILLSPERVHEIFKRI K H V K K I 0 0 1 1 0 1 2 0 1 0 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1212.5735 P24928 P24928 204 213 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.019702 103.88 By MS/MS 2 0 1 1 52911 52911 0 5973 717 6160 14730 11994 11994 1 17897 0 HVQGILR KFMDKKLSLKLNGGRHVQGILRGFDPFMNL SLKLNGGRHVQGILRGFDPFMNLVIDECVE R H V L R G 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 821.48717 P62308;A8MWD9 P62308 26 32 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 2 0.047453 91.584 By MS/MS 10 0 1 1 733130 733130 0 5974 30 6161 14731 11995 11995 1 39513 0 HVSPLIGR TGAVATALGLNALTKHVSPLIGRFVPFAAV GLNALTKHVSPLIGRFVPFAAVAAANCINI K H V G R F 0 1 0 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 Q9H9B4 Q9H9B4 171 178 SFXN1 Sideroflexin-1 yes yes 2 0.028218 90.777 By MS/MS By matching 8.33 0.471 2 1 2 1 37158000 37119000 38642 5975 2485 6162 14732;14733;14734 11996 11996 1 473420 52145 HVTVVGELSR ENYPQFKKMSGTVSKHVTVVGELSRLVSER GTVSKHVTVVGELSRLVSERNLLEVSEVEQ K H V S R L 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 3 0 0 10 0 1095.6037 Q9NRW7 Q9NRW7 331 340 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.042195 76.1 By MS/MS 5.5 0.5 1 1 2 2140700 2140700 0 5976 2559 6163 14735;14736 11997 11997 1 18811 0 HVVAVVLGDVGR LLGGWKRWRRGRAARHVVAVVLGDVGRSPR AARHVVAVVLGDVGRSPRMQYHALSLAMHG R H V G R S 1 1 0 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 5 0 0 12 0 1219.7037 Q9BT22 Q9BT22 34 45 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.001989 112.36 By MS/MS 6.5 0.5 1 1 2 2492200 2492200 0 5977 2312 6164 14737;14738 11998 11998 1 24518 0 HVVCAAETGSGK TTVQSSTIPSLLRGRHVVCAAETGSGKTLS RGRHVVCAAETGSGKTLSYLLPLLQRLLGQ R H V G K T 2 0 0 0 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 2 0 0 12 0 1214.5714 Q9NUL7 Q9NUL7 167 178 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0001837 182.46 By MS/MS 6 0 1 1 2118400 2118400 0 5978 2582 6165 14739 11999 11999 1 14563 0 HVVDKHASEK AQQAAGPQGEEALEKHVVDKHASEKHAAAA EALEKHVVDKHASEKHAAAAGGKAENSAAL K H V E K H 1 0 0 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 0 2 0 0 10 1 1148.5938 Q96T17 Q96T17 363 372 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.022298 106.68 By MS/MS 4 0 1 1 36403 36403 0 5979 2237 6166 14740 12000 12000 1 3425.8 0 HVVFIAQR QVRLVRELEKKFSGKHVVFIAQRRILPKPT EKKFSGKHVVFIAQRRILPKPTRKSRTKNK K H V Q R R 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 8 0 968.55558 P62081 P62081 91 98 RPS7 40S ribosomal protein S7 yes yes 2 0.039409 86.512 By MS/MS By matching 9.33 0.471 2 1 2 1 20086000 19984000 102620 5980 1138 6167 14741;14742;14743 12001 12001 1 397290 234000 HVVGEIRR AARDLVSKEGFRRARHVVGEIRRTAQAAAA EGFRRARHVVGEIRRTAQAAAALRRGDYRA R H V R R T 0 2 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 2 0 0 8 1 964.55665 P51570 P51570 280 287 GALK1 Galactokinase yes yes 3 0.034523 82.305 By MS/MS 7 0 1 1 599870 599870 0 5981 997 6168 14744 12002 12002 1 9416.9 0 HVVLGAIENK ADELRRHLELKEKGRHVVLGAIENKVESKG KEKGRHVVLGAIENKVESKGNSPPSSGEAC R H V N K V 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1078.6135 P41227 P41227 170 179 NAA10 N-alpha-acetyltransferase 10 yes yes 2 0.010528 93.143 By MS/MS 8.5 0.5 1 1 2 819060 819060 0 5982 868 6169 14745;14746 12003 12003 1 11256 0 HVVLGAIENKVESK ADELRRHLELKEKGRHVVLGAIENKVESKG RHVVLGAIENKVESKGNSPPSSGEACREEK R H V S K G 1 0 1 0 0 0 2 1 1 1 1 2 0 0 0 1 0 0 0 3 0 0 14 1 1521.8515 P41227 P41227 170 183 NAA10 N-alpha-acetyltransferase 10 yes yes 3 0.00066451 124.3 By MS/MS 8 0 1 1 961050 961050 0 5983 868 6170 14747 12004 12004 1 12133 0 HVVQSISTQQEK MRRKEQEHMINWVEKHVVQSISTQQEKETI VEKHVVQSISTQQEKETIAKCIADLKLLAK K H V E K E 0 0 0 0 0 3 1 0 1 1 0 1 0 0 0 2 1 0 0 2 0 0 12 0 1382.7154 P24539 P24539 222 233 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 1.9165E-44 332.56 By MS/MS 8.5 0.5 1 1 2 20820000 20820000 0 5984 714 6171 14748;14749 12005;12006 12005 2 308570 0 HVVQSISTQQEKETIAK MRRKEQEHMINWVEKHVVQSISTQQEKETI VQSISTQQEKETIAKCIADLKLLAKKAQAQ K H V A K C 1 0 0 0 0 3 2 0 1 2 0 2 0 0 0 2 2 0 0 2 0 0 17 1 1925.0218 P24539 P24539 222 238 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 3 3.235E-07 213 By MS/MS 8.5 0.5 1 1 2 5179000 5179000 0 5985 714 6172 14750;14751 12007;12008 12007 2 74303 0 HVYLDEPIK AIFTCRPNSHPFQERHVYLDEPIKIGRSVA HPFQERHVYLDEPIKIGRSVARCRPAQNNA R H V I K I 0 0 0 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 0 9 0 1112.5866 Q14BN4 Q14BN4 21 29 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.012637 95.815 By MS/MS 3.5 0.5 1 1 2 2165100 2165100 0 5986 1465 6173 14752;14753 12009 12009 1 180760 0 HWDQNER FHAFSAGPGLFSYIRHWDQNERFLVVLNFG PGLFSYIRHWDQNERFLVVLNFGDVGLSAG R H W E R F 0 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 7 0 983.42094 P08195 P08195 556 562 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.021914 110.81 By MS/MS 5 0.816 1 1 1 3 5175000 5175000 0 5987 519 6174 14754;14755;14756 12010;12011 12010 2 164850 0 HWPFQVINDGDKPK IGRKFGDPVVQSDMKHWPFQVINDGDKPKV KHWPFQVINDGDKPKVQVSYKGETKAFYPE K H W P K V 0 0 1 2 0 1 0 1 1 1 0 2 0 1 2 0 0 1 0 1 0 0 14 1 1679.842 P0DMV9;P0DMV8 P0DMV9 89 102 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.00085426 143.25 By MS/MS 5 0 1 1 730040 730040 0 5988 550 6175 14757 12012 12012 1 7321.9 0 HYAHTDCPGHADYVK ITINAAHVEYSTAARHYAHTDCPGHADYVK HYAHTDCPGHADYVKNMITGTAPLDGCILV R H Y V K N 2 0 0 2 1 0 0 1 3 0 0 1 0 0 1 0 1 0 2 1 0 0 15 0 1769.758 P49411 P49411 121 135 TUFM Elongation factor Tu, mitochondrial yes yes 2;3;4 1.1526E-16 218.07 By MS/MS 7.5 0.866 3 1 4 32454000 32454000 0 5989 949 6176 14758;14759;14760;14761 12013;12014;12015;12016 12015 4 510890 0 HYAMQEAK LTESELSSWIQMSFKHYAMQEAKQQFVEYD WIQMSFKHYAMQEAKQQFVEYDKNSDDTVT K H Y A K Q 2 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 8 0 976.44365 Q14257 Q14257 96 103 RCN2 Reticulocalbin-2 yes yes 2 0.051649 81.191 By MS/MS 7 0.816 1 1 1 3 1480800 1480800 0 5990 1436 6177 14762;14763;14764 12017 12017 846 1 11897 0 HYCDSEKPR DMIYFWKNEKLYCGRHYCDSEKPRCAGCDE KLYCGRHYCDSEKPRCAGCDELIFSNEYTQ R H Y P R C 0 1 0 1 1 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1190.5139 Q9UGI8 Q9UGI8 292 300 TES Testin yes yes 3 0.0044992 105.52 By MS/MS 7 0 1 1 756530 756530 0 5991 2720 6178 14765 12018 12018 1 11876 0 HYEVEILDAK ______________________________ ______________________________ K H Y A K T 1 0 0 1 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1215.6136 Q9NZ01 Q9NZ01 3 12 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.0013371 145.17 By MS/MS 1.67 0.471 1 2 3 526110 526110 0 5992 2642 6179 14766;14767;14768 12019;12020 12020 2 149670 0 HYGDQVDR LLLDCGEGTFGQLCRHYGDQVDRVLGTLAA TFGQLCRHYGDQVDRVLGTLAAVFVSHLHA R H Y D R V 0 1 0 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 8 0 988.43626 Q9BQ52 Q9BQ52 527 534 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.049281 82.75 By MS/MS 4 0 1 1 697760 697760 0 5993 2283 6180 14769 12021 12021 1 65664 0 HYHTSAK SIQEAESYAESVGAKHYHTSAKQNKGIEEL YAESVGAKHYHTSAKQNKGIEELFLDLCKR K H Y A K Q 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 1 0 0 0 7 0 842.4035 Q9UL25 Q9UL25 158 164 RAB21 Ras-related protein Rab-21 yes yes 2 0.012522 128.86 By MS/MS 8.5 0.5 1 1 2 203580 203580 0 5994 2769 6181 14770;14771 12022;12023 12023 2 3543.6 0 HYLFDVQR AIDTEKSQQALVQKRHYLFDVQRNNIAMAL QALVQKRHYLFDVQRNNIAMALEVTYRERL R H Y Q R N 0 1 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1076.5403 P24539 P24539 164 171 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.010393 110.31 By MS/MS 9 0.816 1 1 1 3 43347000 43347000 0 5995 714 6182 14772;14773;14774 12024;12025 12025 2 633410 0 HYLFYDGESVSGK RKMAEMKTEDGKVEKHYLFYDGESVSGKVN EKHYLFYDGESVSGKVNLAFKQPGKRLEHQ K H Y G K V 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 2 0 0 2 1 0 0 13 0 1500.6885 O75436 O75436 39 51 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.00029793 152.54 By MS/MS 7 0 1 1 1012500 1012500 0 5996 328 6183 14775 12026 12026 1 15895 0 HYNGEAYEDDEHHPR QVELVDFDPNQERRRHYNGEAYEDDEHHPR HYNGEAYEDDEHHPRGGVQCQTS_______ R H Y P R G 1 1 1 2 0 0 3 1 3 0 0 0 0 0 1 0 0 0 2 0 0 0 15 0 1867.751 P31689 P31689 375 389 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 3;4 0.00013232 178.68 By MS/MS 6.5 0.5 2 2 4 13502000 13502000 0 5997 787 6184 14776;14777;14778;14779 12027;12028;12029;12030 12028 4 117340 0 HYRGPAGDATVASEK DPLPVPTEEGNPLLKHYRGPAGDATVASEK HYRGPAGDATVASEKESVM___________ K H Y E K E 3 1 0 1 0 0 1 2 1 0 0 1 0 0 1 1 1 0 1 1 0 0 15 1 1557.7536 Q15758 Q15758 523 537 SLC1A5 Neutral amino acid transporter B(0) yes yes 3 0.00029956 164.7 By MS/MS 7 2 1 1 2 4110900 4110900 0 5998 1530 6185 14780;14781 12031;12032 12031 2 44571 0 HYRGPAGDATVASEKESVM DPLPVPTEEGNPLLKHYRGPAGDATVASEK PAGDATVASEKESVM_______________ K H Y V M - 3 1 0 1 0 0 2 2 1 0 0 1 1 0 1 2 1 0 1 2 0 0 19 2 2003.9371 Q15758 Q15758 523 541 SLC1A5 Neutral amino acid transporter B(0) yes yes 3 0.00015885 168.68 By MS/MS 5 0 1 1 872350 872350 0 5999 1530 6186 14782 12033 12033 873 1 8749.3 0 HYTEAIK GNECFQKGDYPQAMKHYTEAIKRNPKDAKL GDYPQAMKHYTEAIKRNPKDAKLYSNRAAC K H Y I K R 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 860.43922 P31948 P31948 382 388 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.054827 88.643 By MS/MS 5 0 1 1 975900 975900 0 6000 795 6187 14783 12034 12034 1 9787.7 0 HYTEAIKR GNECFQKGDYPQAMKHYTEAIKRNPKDAKL DYPQAMKHYTEAIKRNPKDAKLYSNRAACY K H Y K R N 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 8 1 1016.5403 P31948 P31948 382 389 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.0068055 123.98 By MS/MS 5.5 1.12 1 1 1 1 4 4142200 4142200 0 6001 795 6188 14784;14785;14786;14787 12035 12035 1 68808 0 IAAAILNTPDLR LIRPMYSNPPLNGARIAAAILNTPDLRKQW GARIAAAILNTPDLRKQWLQEVKVMADRII R I A L R K 3 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1266.7296 P00505 P00505 326 337 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 5.5631E-09 236.92 By MS/MS 8 1 1 1 2 2374800 2374800 0 6002 446 6189 14788;14789 12036;12037 12036 1 37739 0 IAAEEKK TRYNYLKPRAEEERRIAAEEKKKQDELKRI PRAEEERRIAAEEKKKQDELKRIARELAED R I A K K K 2 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 7 1 787.44397 P56385 P56385 43 49 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.00873 167.82 By MS/MS By matching 9.5 0.5 1 1 1 1 842300 828930 13372 6003 1072 6190 14790;14791 12038 12038 1 44676 30493 IAAGQAVEAIVK SKVLIYLRSANWDTRIAAGQAVEAIVKNVP DTRIAAGQAVEAIVKNVPEWNPVPRTRQEP R I A V K N 4 0 0 0 0 1 1 1 0 2 0 1 0 0 0 0 0 0 0 2 0 0 12 0 1168.6816 O14981 O14981 60 71 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.00064209 131.83 By MS/MS 2 0 1 1 421230 421230 0 6004 154 6191 14792 12039 12039 1 142480 0 IAAGSSDFLVK TTNANHVVFNGDGTKIAAGSSDFLVKIVDV DGTKIAAGSSDFLVKIVDVMDSSQQKTFRG K I A V K I 2 0 0 1 0 0 0 1 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1106.5972 O75717 O75717 109 119 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0068559 99.013 By MS/MS 3 0 1 1 1116900 1116900 0 6005 342 6192 14793 12040 12040 1 20437 0 IAAHLADFTPR EAIWSSEMRRLMIEKIAAHLADFTPRLQSN MIEKIAAHLADFTPRLQSNTRALYQYCPIP K I A P R L 3 1 0 1 0 0 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 11 0 1210.6459 O75165 O75165 1215 1225 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.016731 112.85 By MS/MS 2 0 1 1 179260 179260 0 6006 302 6193 14794 12041 12041 1 60633 0 IAAQLLQQEQK EEEDDDLKEVTDLRKIAAQLLQQEQKNRIL DLRKIAAQLLQQEQKNRILNHSTSVMRNKP K I A Q K N 2 0 0 0 0 4 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1268.7089 Q5VUJ6 Q5VUJ6 476 486 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 2 3.9568E-06 178.84 By MS/MS 4.5 0.5 1 1 2 2351400 2351400 0 6007 1651 6194 14795;14796 12042 12042 1 191690 0 IAAQQSETAR SQREVTEVLQEATCKIAAQQSETARLTTDA EATCKIAAQQSETARLTTDAARQICEMAEL K I A A R L 3 1 0 0 0 2 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1073.5465 Q5VT06 Q5VT06 1434 1443 CEP350 Centrosome-associated protein 350 yes yes 2 0.0079202 99.013 By MS/MS 1 0 1 1 168790 168790 0 6008 1647 6195 14797 12043 12043 1 40673 0 IAAQTLLGTAK EGAVKMGMPSSLAHRIAAQTLLGTAKMLLH LAHRIAAQTLLGTAKMLLHEGQHPAQLRSD R I A A K M 3 0 0 0 0 1 0 1 0 1 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1085.6445 Q53H96 Q53H96 208 218 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 2 3.2727E-05 157.78 By MS/MS 8 0 1 1 6119700 6119700 0 6009 1590 6196 14798 12044 12044 1 77260 0 IAAYAYSALSQIR ASEPIPFSDLQQVSRIAAYAYSALSQIRVD SRIAAYAYSALSQIRVDAKEELVVQFGIP_ R I A I R V 4 1 0 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 2 0 0 0 13 0 1425.7616 Q6IAA8 Q6IAA8 135 147 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 2 0.0009083 149.94 By MS/MS 10 0 1 1 76334 76334 0 6010 1680 6197 14799 12045 12045 1 4114.1 0 IAAYLFK LAQRLEKHELIEFRRIAAYLFKGNNRWKQS HELIEFRRIAAYLFKGNNRWKQSVELCKKD R I A F K G 2 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 7 0 824.47963 Q00610 Q00610 1510 1516 CLTC Clathrin heavy chain 1 yes yes 2 0.033983 101.72 By MS/MS 3 1.41 1 1 1 1 1 5 1764300 1764300 0 6011 1262 6198 14800;14801;14802;14803;14804 12046 12046 1 165260 0 IACGPPQAK GTSEQNDILKVVEKRIACGPPQAKLNGQQA KVVEKRIACGPPQAKLNGQQAALASQYRAM R I A A K L 2 0 0 0 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 9 0 940.48004 Q9Y520 Q9Y520 221 229 PRRC2C Protein PRRC2C yes yes 2 0.011155 98.418 By MS/MS 2.5 1.12 1 1 1 1 4 1540600 1540600 0 6012 2905 6199 14805;14806;14807;14808 12047;12048 12048 2 324830 0 IACIFGMQLER EVASLCLEGIRCAIRIACIFGMQLERDAYV CAIRIACIFGMQLERDAYVQALARFSLLTA R I A E R D 1 1 0 0 1 1 1 1 0 2 1 0 1 1 0 0 0 0 0 0 0 0 11 0 1336.6632 Q9Y6D5 Q9Y6D5 931 941 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.022639 83.869 By MS/MS 2 0 1 1 106640 106640 0 6013 2940 6200 14809 12049 12049 1215 1 36070 0 IACLDFSLQK VVGSQGMPKRIVNAKIACLDFSLQKTKMKL IVNAKIACLDFSLQKTKMKLGVQVVITDPE K I A Q K T 1 0 0 1 1 1 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1193.6114 P17987 P17987 234 243 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00025495 143.37 By MS/MS 4.57 2.44 1 1 1 1 1 1 1 7 40199000 40199000 0 6014 648 6201 14810;14811;14812;14813;14814;14815;14816 12050;12051;12052;12053;12054 12050 5 403060 0 IADDADPR QDAGPASRDVQATGRIADDADPRVALVNDS DVQATGRIADDADPRVALVNDSLSDVTSTT R I A P R V 2 1 0 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 8 0 871.40356 Q7Z2W4 Q7Z2W4 478 485 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.003804 131.04 By MS/MS 4 0 1 1 877610 877610 0 6015 1778 6202 14817 12055 12055 1 82589 0 IADFGLCK LKLDNLLLDTEGFVKIADFGLCKEGMGYGD DTEGFVKIADFGLCKEGMGYGDRTSTFCGT K I A C K E 1 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 922.45824 Q16513;Q16512;Q6P5Z2 Q16513 798 805 PKN2;PKN1;PKN3 Serine/threonine-protein kinase N2;Serine/threonine-protein kinase N1;Serine/threonine-protein kinase N3 no no 2 0.015747 104.37 By MS/MS 3.5 0.5 1 1 2 1028900 1028900 0 6016 1547;1546;1714 6203 14818;14819 12056 12056 1 57912 0 IADGYEQAAR EEAEQLLDRGIHPIRIADGYEQAARVAIEH IHPIRIADGYEQAARVAIEHLDKISDSVLV R I A A R V 3 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1092.52 P48643 P48643 133 142 CCT5 T-complex protein 1 subunit epsilon yes yes 2 1.9076E-07 182.39 By MS/MS By MS/MS 5.61 2.48 2 1 1 3 5 2 2 1 1 14 4 141470000 140640000 830510 6017 940 6204 14820;14821;14822;14823;14824;14825;14826;14827;14828;14829;14830;14831;14832;14833;14834;14835;14836;14837 12057;12058;12059;12060;12061;12062;12063;12064;12065;12066;12067;12068;12069;12070;12071 12063 15 1147300 843790 IADQVIPK LFEDLFKKFNSEMKKIADQVIPKQRAAQFD FNSEMKKIADQVIPKQRAAQFDVVKHMRQD K I A P K Q 1 0 0 1 0 1 0 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 8 0 882.51747 Q9NW08 Q9NW08 387 394 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.0057163 122.18 By MS/MS 3.5 0.5 1 1 2 946420 946420 0 6018 2607 6205 14838;14839 12072 12072 1 32324 0 IAEAIQK I A Q K 2 0 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 7 0 771.44905 REV__P0CG41 yes no 2 0.044027 94.163 By MS/MS 7 0 1 1 1414100 1414100 0 + 6019 2954 6206 14840 12073 12073 1 22199 0 IAEENGAAFAGGTSLIQK INKVAVFTENASEVKIAEENGAAFAGGTSL ENGAAFAGGTSLIQKIWDDEIVADFYVAVP K I A Q K I 4 0 1 0 0 1 2 3 0 2 1 1 0 1 0 1 1 0 0 0 0 0 18 0 1775.9054 Q9BYD6 Q9BYD6 169 186 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 1.2613E-34 314.55 By MS/MS 7.5 0.5 1 1 2 2948800 2948800 0 6020 2371 6207 14841;14842 12074 12074 1 39087 0 IAEESNFPFIK LEGPPHSGKTALAAKIAEESNFPFIKICSP LAAKIAEESNFPFIKICSPDKMIGFSETAK K I A I K I 1 0 1 0 0 0 2 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 11 0 1293.6605 P46459 P46459 556 566 NSF Vesicle-fusing ATPase yes yes 2 0.00052204 131.12 By MS/MS 7 2 1 1 2 4995700 4995700 0 6021 912 6208 14843;14844 12075;12076;12077 12075 3 50912 0 IAEEVVKIEER DASEQKTELERLKHRIAEEVVKIEERKNKI LKHRIAEEVVKIEERKNKIDDELKEVQPLV R I A E R K 1 1 0 0 0 0 4 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 11 1 1313.7191 Q8NCM8 Q8NCM8 2960 2970 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.022548 103.21 By MS/MS 1 0 1 1 0 0 0 6022 1952 6209 14845 12078 12078 1 0 0 IAEFAFEYAR VVQSIKLITEGASKRIAEFAFEYARNNHRS GASKRIAEFAFEYARNNHRSNVTAVHKANI R I A A R N 3 1 0 0 0 0 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 10 0 1215.5924 P50213 P50213 179 188 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.001453 114.86 By MS/MS 7.5 0.5 1 1 2 2914500 2914500 0 6023 971 6210 14846;14847 12079;12080 12079 2 44570 0 IAEFTTNLTEEEEK QNCKLAKEKKLLEDRIAEFTTNLTEEEEKS RIAEFTTNLTEEEEKSKSLAKLKNKHEAMI R I A E K S 1 0 1 0 0 0 5 0 0 1 1 1 0 1 0 0 3 0 0 0 0 0 14 0 1652.7781 P35579 P35579 1001 1014 MYH9 Myosin-9 yes yes 2 4.7207E-24 317.81 By MS/MS 2 0 1 1 739830 739830 0 6024 824 6211 14848 12081 12081 1 250240 0 IAEFTTNLTEEEEKSK QNCKLAKEKKLLEDRIAEFTTNLTEEEEKS AEFTTNLTEEEEKSKSLAKLKNKHEAMITD R I A S K S 1 0 1 0 0 0 5 0 0 1 1 2 0 1 0 1 3 0 0 0 0 0 16 1 1867.9051 P35579 P35579 1001 1016 MYH9 Myosin-9 yes yes 2 7.4813E-57 360.11 By MS/MS 2 0 1 1 660380 660380 0 6025 824 6212 14849 12082 12082 1 223370 0 IAEGEHPK GYSGDDINKFLWMVRIAEGEHPKDIRESDY KFLWMVRIAEGEHPKDIRESDYFTPQGEFR R I A P K D 1 0 0 0 0 0 2 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 8 0 879.44503 Q8TCJ2 Q8TCJ2 681 688 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.043599 84.916 By MS/MS 1.5 0.5 1 1 2 123960 123960 0 6026 1991 6213 14850;14851 12083 12083 1 39188 0 IAEGEHPKDIR GYSGDDINKFLWMVRIAEGEHPKDIRESDY WMVRIAEGEHPKDIRESDYFTPQGEFRVDK R I A I R E 1 1 0 1 0 0 2 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 11 1 1263.6571 Q8TCJ2 Q8TCJ2 681 691 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 3 0.024753 75.652 By MS/MS 2 0.816 1 1 1 3 797370 797370 0 6027 1991 6214 14852;14853;14854 12084;12085 12085 2 166260 0 IAEHLGDSQSLGR KSIQVLPSHELVSTRIAEHLGDSQSLGRML TRIAEHLGDSQSLGRMLADYRARGGRIQPK R I A G R M 1 1 0 1 0 1 1 2 1 1 2 0 0 0 0 2 0 0 0 0 0 0 13 0 1381.695 Q9Y2I7 Q9Y2I7 1138 1150 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 3 0.015684 100.04 By MS/MS 2 0 1 1 260820 260820 0 6028 2830 6215 14855 12086 12086 1 88219 0 IAELMPGASGAEVK HSRKMNLTRGINLRKIAELMPGASGAEVKG KIAELMPGASGAEVKGVCTEAGMYALRERR K I A V K G 3 0 0 0 0 0 2 2 0 1 1 1 1 0 1 1 0 0 0 1 0 0 14 0 1371.7068 P62195 P62195 347 360 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0022465 111.52 By MS/MS 7 0 1 1 1870000 1870000 0 6029 1142 6216 14856 12087 12087 642 1 29356 0 IAENLGDVQISDK ALQLRQEALEMSRNRIAENLGDVQISDKIT NRIAENLGDVQISDKITISKNFKENVIRPI R I A D K I 1 0 1 2 0 1 1 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1400.7147 Q9H078 Q9H078 521 533 CLPB Caseinolytic peptidase B protein homolog yes yes 2 2.1998E-05 187.78 By MS/MS 6.5 0.5 1 1 2 9451300 9451300 0 6030 2402 6217 14857;14858 12088 12088 1 67023 0 IAENPANPPVGGK GTGSQSVERTKPKAKIAENPANPPVGGKAK AKIAENPANPPVGGKAKSPMFPALGEASSD K I A G K A 2 0 2 0 0 0 1 2 0 1 0 1 0 0 3 0 0 0 0 1 0 0 13 0 1262.6619 Q9Y4E1;Q641Q2;Q5SRD0 Q9Y4E1 1133 1145 FAM21C;FAM21A;FAM21D WASH complex subunit FAM21C;WASH complex subunit FAM21A;Putative WASH complex subunit FAM21 yes no 2 0.026885 81.017 By MS/MS 2 0 1 1 151270 151270 0 6031 1665 6218 14859 12089 12089 1 51165 0 IAEPSVCGR QVCAHTTRVEMDRGRIAEPSVCGRCHTTHS EMDRGRIAEPSVCGRCHTTHSMALIHNRSL R I A G R C 1 1 0 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 9 0 987.48076 P33991 P33991 322 330 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.027094 79.713 By MS/MS 4 0 1 1 1230600 1230600 0 6032 806 6219 14860 12090 12090 1 115810 0 IAESIPYLK FAKVHYGFILKAQNKIAESIPYLKEGIESG LKAQNKIAESIPYLKEGIESGDPGTDDGRF K I A L K E 1 0 0 0 0 0 1 0 0 2 1 1 0 0 1 1 0 0 1 0 0 0 9 0 1032.5855 Q12797 Q12797 504 512 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.0093421 101.6 By MS/MS 3.5 0.5 1 1 2 955470 955470 0 6033 1329 6220 14861;14862 12091;12092 12092 2 77308 0 IAESNHIK REREAILAIHKEAQRIAESNHIKLSGSNPY IHKEAQRIAESNHIKLSGSNPYTTVTPQII R I A I K L 1 0 1 0 0 0 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 0 8 0 910.48723 O43707 O43707 597 604 ACTN4 Alpha-actinin-4 yes yes 2 0.025808 93.195 By MS/MS 4 0 1 1 407330 407330 0 6034 229 6221 14863 12093 12093 1 38332 0 IAEVDASVVR LTYGRRIPLAEWESRIAEVDASVVREICSK EWESRIAEVDASVVREICSKYIYDQCPAVA R I A V R E 2 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 3 0 0 10 0 1057.5768 P31930 P31930 433 442 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 0.00037458 135.71 By MS/MS 6.5 0.5 1 1 2 6236800 6236800 0 6035 788 6222 14864;14865 12094;12095 12094 2 68314 0 IAEVDCTAER EELSKKEFPGLAGVKIAEVDCTAERNICSK LAGVKIAEVDCTAERNICSKYSVRGYPTLL K I A E R N 2 1 0 1 1 0 2 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1162.5288 Q8NBS9 Q8NBS9 376 385 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.01093 92.239 By MS/MS By matching 6 0 2 1 1 1353600 1334400 19269 6036 1944 6223 14866;14867 12096 12096 1 9172.6 19745 IAFAITAIK HILRVLNTNIDGRRKIAFAITAIKGVGRRY IDGRRKIAFAITAIKGVGRRYAHVVLRKAD K I A I K G 3 0 0 0 0 0 0 0 0 3 0 1 0 1 0 0 1 0 0 0 0 0 9 0 946.58515 P62269 P62269 26 34 RPS18 40S ribosomal protein S18 yes yes 2 0.00037977 150.4 By MS/MS 9.5 0.5 1 1 2 31044000 31044000 0 6037 1149 6224 14868;14869 12097;12098;12099 12099 3 764710 0 IAFGGETDEATR LRHFKRILSLLEGQKIAFGGETDEATRYIA GQKIAFGGETDEATRYIAPTVLTDVDPKTK K I A T R Y 2 1 0 1 0 0 2 2 0 1 0 0 0 1 0 0 2 0 0 0 0 0 12 0 1265.5888 P51648 P51648 300 311 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 0.00038833 141.1 By MS/MS By matching 6.75 0.829 2 1 1 3 1 20161000 20027000 133980 6038 1002 6225 14870;14871;14872;14873 12100;12101;12102 12100 3 160990 137290 IAFLQGER ERAHWEVERAELQARIAFLQGERKGQENLK RAELQARIAFLQGERKGQENLKKDLVRRIK R I A E R K 1 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 932.50797 Q13033 Q13033 97 104 STRN3 Striatin-3 yes yes 2 0.015054 105.14 By MS/MS 4.5 0.5 1 1 2 2365100 2365100 0 6039 1346 6226 14874;14875 12103 12103 1 194760 0 IAGLCNR VSFDKTSATWLALSRIAGLCNRAVFQANQE ATWLALSRIAGLCNRAVFQANQENLPILKR R I A N R A 1 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 802.41196 P05023;P50993;Q13733 P05023 424 430 ATP1A1;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 2 0.01564 120.76 By MS/MS 3 1.41 1 1 1 1 1 5 11833000 11833000 0 6040 481 6227 14876;14877;14878;14879;14880 12104;12105;12106;12107 12104 4 1683000 0 IAGQVAAANK GGRKLTPQGQRDLDRIAGQVAAANKKH___ RDLDRIAGQVAAANKKH_____________ R I A N K K 4 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 0 941.52943 P39019 P39019 134 143 RPS19 40S ribosomal protein S19 yes yes 2 4.826E-08 198.07 By MS/MS 9.5 0.5 1 1 2 68097000 68097000 0 6041 853 6228 14881;14882 12108;12109;12110 12109 3 3632500 0 IAGQVAAANKK GGRKLTPQGQRDLDRIAGQVAAANKKH___ DLDRIAGQVAAANKKH______________ R I A K K H 4 0 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 11 1 1069.6244 P39019 P39019 134 144 RPS19 40S ribosomal protein S19 yes yes 2;3 9.1224E-07 185.55 By MS/MS 9.5 0.5 2 2 4 12304000 12304000 0 6042 853 6229 14883;14884;14885;14886 12111;12112;12113 12113 3 641260 0 IAGQVAAANKKH GGRKLTPQGQRDLDRIAGQVAAANKKH___ LDRIAGQVAAANKKH_______________ R I A K H - 4 0 1 0 0 1 0 1 1 1 0 2 0 0 0 0 0 0 0 1 0 0 12 2 1206.6833 P39019 P39019 134 145 RPS19 40S ribosomal protein S19 yes yes 2;3 0.0056678 140.35 By MS/MS By matching 10 0 3 2 1 6720400 6702400 17952 6043 853 6230 14887;14888;14889 12114;12115 12115 2 361240 22984 IAGYVTHLMK CEEIAIIPSKKLRNKIAGYVTHLMKRIQRG KLRNKIAGYVTHLMKRIQRGPVRGISIKLQ K I A M K R 1 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 0 1 1 0 0 10 0 1131.6111 P08708 P08708 50 59 RPS17 40S ribosomal protein S17 yes yes 2;3 0.00022168 145.16 By MS/MS By matching 9.44 0.497 5 4 8 1 37226000 37197000 28916 6044 527 6231;6232 14890;14891;14892;14893;14894;14895;14896;14897;14898 12116;12117;12118;12119;12120;12121;12122;12123 12116 229 8 1141000 65936 IAHFLDR ______________________________ AEYDLTTRIAHFLDRHLVFPLLEFLSVKEI R I A D R H 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 870.47119 P60228 P60228 10 16 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.039458 97.602 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 19813000 19781000 32782 6045 1090 6233 14899;14900;14901;14902;14903;14904 12124;12125 12125 2 177530 33592 IAILDIEPQTLK GTKFETVHQIHKQNKIAILDIEPQTLKIVR QNKIAILDIEPQTLKIVRTAELSPFIVFIA K I A L K I 1 0 0 1 0 1 1 0 0 3 2 1 0 0 1 0 1 0 0 0 0 0 12 0 1352.7915 Q00013 Q00013 375 386 MPP1 55 kDa erythrocyte membrane protein yes yes 2 0.00084684 128.01 By MS/MS 6 0 1 1 954640 954640 0 6046 1257 6234 14905 12126 12126 1 6562.4 0 IAILTCPFEPPKPK DFSHPQMPKKVEDAKIAILTCPFEPPKPKT KIAILTCPFEPPKPKTKHKLDVTSVEDYKA K I A P K T 1 0 0 0 1 0 1 0 0 2 1 2 0 1 4 0 1 0 0 0 0 0 14 1 1609.8902 P48643 P48643 248 261 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.0010183 120.86 By MS/MS 5.86 1.25 1 2 2 1 1 7 59363000 59363000 0 6047 940 6235 14906;14907;14908;14909;14910;14911;14912 12127;12128;12129;12130;12131;12132;12133;12134 12130 8 439620 0 IAIWTTECENR DVCGAVVNVRAKGDKIAIWTTECENREAVT KGDKIAIWTTECENREAVTHIGRVYKERLG K I A N R E 1 1 1 0 1 0 2 0 0 2 0 0 0 0 0 0 2 1 0 0 0 0 11 0 1391.6503 P06730 P06730 163 173 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 1.8318E-09 230.24 By MS/MS 8.5 0.5 1 1 2 5724100 5724100 0 6048 499 6236 14913;14914 12135;12136 12135 2 77018 0 IAIYELLFK ______________________________ MPKKNRIAIYELLFKEGVMVAKKDVHMPKH R I A F K E 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1108.6532 P46783 P46783 9 17 RPS10 40S ribosomal protein S10 yes yes 2 0.035371 82.279 By MS/MS 9.5 0.5 1 1 2 691150 691150 0 6049 920 6237 14915;14916 12137 12137 1 16243 0 IAKEEIFGPVQPLFK FIKPTVFGGVQDDMRIAKEEIFGPVQPLFK IAKEEIFGPVQPLFKFKKIEEVVERANNTR R I A F K F 1 0 0 0 0 1 2 1 0 2 1 2 0 2 2 0 0 0 0 1 0 0 15 1 1714.9658 P30837 P30837 412 426 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 3 0.00022593 136.99 By MS/MS 6 0 1 1 1709000 1709000 0 6050 780 6238 14917 12138 12138 1 11748 0 IALEFLDSK NIEIVGSRLPPGAERIALEFLDSKALCRNI PPGAERIALEFLDSKALCRNIPHMKGKSAM R I A S K A 1 0 0 1 0 0 1 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 9 0 1034.5648 Q53R41 Q53R41 777 785 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.0020937 120.12 By MS/MS 4.5 0.5 1 1 2 1488300 1488300 0 6051 1591 6239 14918;14919 12139 12139 1 19475 0 IALLPLLQAETDR NRERRRLQIEDFEARIALLPLLQAETDRRT ARIALLPLLQAETDRRTLQMLRENLEEEAI R I A D R R 2 1 0 1 0 1 1 0 0 1 4 0 0 0 1 0 1 0 0 0 0 0 13 0 1451.8348 Q9P0J0 Q9P0J0 69 81 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2 0.00011279 172.17 By MS/MS 10 0 1 1 380590 380590 0 6052 2664 6240 14920 12140;12141 12140 2 20512 0 IALLPLLQAETDRR NRERRRLQIEDFEARIALLPLLQAETDRRT RIALLPLLQAETDRRTLQMLRENLEEEAII R I A R R T 2 2 0 1 0 1 1 0 0 1 4 0 0 0 1 0 1 0 0 0 0 0 14 1 1607.9359 Q9P0J0 Q9P0J0 69 82 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2;3 0.010817 102.06 By MS/MS 10 0 2 2 835880 835880 0 6053 2664 6241 14921;14922 12142;12143 12142 2 45051 0 IALTDNALIAR ELIYKRGYGKINKKRIALTDNALIARSLGK NKKRIALTDNALIARSLGKYGIICMEDLIH R I A A R S 3 1 1 1 0 0 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1169.6768 P18124 P18124 167 177 RPL7 60S ribosomal protein L7 yes yes 2 2.6252E-09 214.71 By MS/MS By MS/MS 8 0 2 1 1 21978000 21691000 287280 6054 652 6242 14923;14924 12144;12145 12145 2 273840 387670 IALYGLGSIPDER KIDISPVLLQKGSTKIALYGLGSIPDERLY TKIALYGLGSIPDERLYRMFVNKKVTMLRP K I A E R L 1 1 0 1 0 0 1 2 0 2 2 0 0 0 1 1 0 0 1 0 0 0 13 0 1402.7456 P49959 P49959 176 188 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00022466 160.18 By MS/MS 4.5 0.5 1 1 2 1765500 1765500 0 6055 970 6243 14925;14926 12146;12147 12147 2 33280 0 IAMTTCEQIVR AVQELVHPVVDRSIKIAMTTCEQIVRKDFA RSIKIAMTTCEQIVRKDFALDSEESRMRIA K I A V R K 1 1 0 0 1 1 1 0 0 2 0 0 1 0 0 0 2 0 0 1 0 0 11 0 1320.653 A5YKK6 A5YKK6 1415 1425 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 2.3332E-05 160.75 By MS/MS 2 0 1 1 802950 802950 0 6056 19 6244 14927 12148 12148 1 271590 0 IANLQTDLSDGLR FTRWCNEHLKCVSKRIANLQTDLSDGLRLI KRIANLQTDLSDGLRLIALLEVLSQKKMHR R I A L R L 1 1 1 2 0 1 0 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1414.7416 P21333 P21333 64 76 FLNA Filamin-A yes yes 2 6.7802E-08 217.22 By MS/MS 2.33 1.25 1 1 1 3 2833600 2833600 0 6057 677 6245 14928;14929;14930 12149 12149 1 583160 0 IANPDQLLTQDVEK LQAFTYYKMGNLDNRIANPDQLLTQDVEKF RIANPDQLLTQDVEKFCNSVVDLYSNLSKP R I A E K F 1 0 1 2 0 2 1 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1582.8203 P28288 P28288 182 195 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 1.089E-07 220.37 By MS/MS 3.4 1.85 1 1 1 1 1 5 18970000 18970000 0 6058 752 6246 14931;14932;14933;14934;14935 12150;12151;12152;12153;12154 12150 5 505150 0 IANPVEGSSGR ANINEIRQMSGAQIKIANPVEGSSGRQVTI AQIKIANPVEGSSGRQVTITGSAASISLAQ K I A G R Q 1 1 1 0 0 0 1 2 0 1 0 0 0 0 1 2 0 0 0 1 0 0 11 0 1085.5465 Q15365 Q15365 315 325 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.00092877 123.01 By MS/MS By matching 6.4 1.02 1 2 1 1 3 2 11582000 11470000 112160 6059 1500 6247 14936;14937;14938;14939;14940 12155 12155 1 150630 103190 IANPVEGSTDR AKINEIRQMSGAQIKIANPVEGSTDRQVTI AQIKIANPVEGSTDRQVTITGSAASISLAQ K I A D R Q 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 0 11 0 1157.5677 Q15366 Q15366 323 333 PCBP2 Poly(rC)-binding protein 2 yes yes 2 2.9274E-05 158.08 By MS/MS By matching 7.33 0.471 2 1 2 1 12936000 12909000 27663 6060 1501 6248 14941;14942;14943 12156;12157;12158 12157 3 199820 49819 IAPLAEGALPYNLAELQR LYNASGRLTLADIERIAPLAEGALPYNLAE LAEGALPYNLAELQRQQSPGLGRPIWLQIA R I A Q R Q 4 1 1 0 0 1 2 1 0 1 4 0 0 0 2 0 0 0 1 0 0 0 18 0 1938.0575 O75746 O75746 292 309 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 7.4447E-05 186.29 By MS/MS 5.5 0.5 1 1 2 1173500 1173500 0 6061 344 6249 14944;14945 12159 12159 1 9845.9 0 IAPLEEGTLPFNLAEAQR LYEPRGRMTLADIERIAPLEEGTLPFNLAE LEEGTLPFNLAEAQRQKASGDSARPVLLQV R I A Q R Q 3 1 1 0 0 1 3 1 0 1 3 0 0 1 2 0 1 0 0 0 0 0 18 0 1968.0316 Q9UJS0 Q9UJS0 293 310 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 4.3104E-08 261.45 By MS/MS 5.5 0.957 1 2 2 1 6 21984000 21984000 0 6062 2748 6250 14946;14947;14948;14949;14950;14951 12160;12161;12162;12163;12164 12160 5 211940 0 IAPPEAPVTGYMFGK SRTTNFAGILSQGLRIAPPEAPVTGYMFGK IAPPEAPVTGYMFGKGIYFADMVSKSANYC R I A G K G 2 0 0 0 0 0 1 2 0 1 0 1 1 1 3 0 1 0 1 1 0 0 15 0 1576.796 P09874 P09874 879 893 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.048107 67.385 By MS/MS 3.5 0.5 1 1 2 2079600 2079600 0 6063 543 6251 14952;14953 12165 12165 1 188360 0 IAQEKAEQESGLYR HVCQEIISEWDEQERIAQEKAEQESGLYRY RIAQEKAEQESGLYRYRSRNSRTALSEEEE R I A Y R Y 2 1 0 0 0 2 3 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 14 1 1620.8107 Q9NU22 Q9NU22 3541 3554 MDN1 Midasin yes yes 2 0.0022307 166.62 By MS/MS 1 0 1 1 124630 124630 0 6064 2580 6252 14954 12166;12167 12167 2 30033 0 IAQLEEQLDNETK VKSKYKASITALEAKIAQLEEQLDNETKER AKIAQLEEQLDNETKERQAACKQVRRTEKK K I A T K E 1 0 1 1 0 2 3 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 13 0 1529.7573 P35579 P35579 1816 1828 MYH9 Myosin-9 yes yes 2 7.5868E-44 326.79 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 2052800 1906900 145850 6065 824 6253 14955;14956;14957 12168;12169;12170;12171;12172 12171 4 563330 206260 IAQLEEQLDNETKER VKSKYKASITALEAKIAQLEEQLDNETKER IAQLEEQLDNETKERQAACKQVRRTEKKLK K I A E R Q 1 1 1 1 0 2 4 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 15 1 1814.901 P35579 P35579 1816 1830 MYH9 Myosin-9 yes yes 2 1.1045E-15 250.81 By MS/MS 2 0 1 1 685190 685190 0 6066 824 6254 14958 12173 12173 1 231760 0 IAQSDYIPTQQDVLR QLNDSAAYYLNDLERIAQSDYIPTQQDVLR IAQSDYIPTQQDVLRTRVKTTGIVETHFTF R I A L R T 1 1 0 2 0 3 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 15 0 1745.8948 P04899 P04899 163 177 GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 2 0.00053783 161.87 By MS/MS 7 0 1 1 2105500 2105500 0 6067 480 6255 14959 12174 12174 1 33053 0 IARDEGGK GTDIMYTGTLDCWRKIARDEGGKAFFKGAW TLDCWRKIARDEGGKAFFKGAWSNVLRGMG K I A G K A 1 1 0 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 8 1 844.44028 P05141 P05141 261 268 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.0088907 145.16 By MS/MS 2 0.816 1 1 1 3 447810 447810 0 6068 487 6256 14960;14961;14962 12175 12175 1 143080 0 IARELAEDDSILK RIAAEEKKKQDELKRIARELAEDDSILK__ KRIARELAEDDSILK_______________ R I A L K - 2 1 0 2 0 0 2 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 13 1 1471.7882 P56385 P56385 57 69 ATP5I ATP synthase subunit e, mitochondrial yes yes 2;3 0.0001642 156.52 By MS/MS 10 0 3 3 7541200 7541200 0 6069 1072 6257 14963;14964;14965 12176;12177;12178 12178 3 406440 0 IASDGLK RNIGKTLVTRTQGTKIASDGLKGRVFEVSL VTRTQGTKIASDGLKGRVFEVSLADLQNDE K I A L K G 1 0 0 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 702.3912 P61247 P61247 57 63 RPS3A 40S ribosomal protein S3a yes yes 2 0.029363 105.2 By MS/MS 8.5 0.5 1 1 2 29822000 29822000 0 6070 1118 6258 14966;14967 12179 12179 1 377780 0 IASHSHVK ______________________________ STTKTQRIASHSHVKGLGLDESGLAKQAAS R I A V K G 1 0 0 0 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 1 0 0 8 0 877.477 Q9Y265 Q9Y265 15 22 RUVBL1 RuvB-like 1 yes yes 2 0.0024534 138.83 By MS/MS By MS/MS 7.43 1.5 3 1 1 1 1 6 1 2705300 2687100 18187 6071 2815 6259 14968;14969;14970;14971;14972;14973;14974 12180;12181;12182;12183;12184;12185;12186 12183 7 20811 18636 IASLEVENQSLR ASSGTSGDHGELVVRIASLEVENQSLRGVV VVRIASLEVENQSLRGVVQELQQAISKLEA R I A L R G 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 12 0 1357.7201 P29692 P29692 84 95 EEF1D Elongation factor 1-delta yes yes 2 8.641E-13 240.37 By MS/MS By matching 7.33 0.471 2 1 2 1 9815500 9748100 67478 6072 760 6260 14975;14976;14977 12187 12187 1 152280 121530 IASNVLNTK VTWSMQEDGLLVLCRIASNVLNTKVKGPFV LLVLCRIASNVLNTKVKGPFVTWQVVRDIL R I A T K V 1 0 2 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 Q12789 Q12789 1278 1286 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.021746 88.177 By MS/MS 2 0 1 1 595600 595600 0 6073 1328 6261 14978 12188 12188 1 201460 0 IASVAVQQIEK FISSTDYLSTLLLDRIASVAVQQIEKIHPF LLDRIASVAVQQIEKIHPFTIPAIIRPFSV R I A E K I 2 0 0 0 0 2 1 0 0 2 0 1 0 0 0 1 0 0 0 2 0 0 11 0 1184.6765 Q53R41 Q53R41 557 567 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.00092354 123.11 By MS/MS 5 0 1 1 1564700 1564700 0 6074 1591 6262 14979 12189 12189 1 15693 0 IATANMLGIR EERERNNQNPWTFERIATANMLGIRKVLSP WTFERIATANMLGIRKVLSPYDLTHKGKYW R I A I R K 2 1 1 0 0 0 0 1 0 2 1 0 1 0 0 0 1 0 0 0 0 0 10 0 1058.5906 Q9NX20 Q9NX20 218 227 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 0.023065 96.034 By MS/MS 8 0 1 1 542010 542010 0 6075 2617 6263 14980 12190 12190 0 6842.9 0 IATEFNQLQFHAVQSK LEASSPLLTGQILERIATEFNQLQFHAVQS ATEFNQLQFHAVQSKGMPLLDKVRPRIAGI R I A S K G 2 0 1 0 0 3 1 0 1 1 1 1 0 2 0 1 1 0 0 1 0 0 16 0 1859.953 Q14746 Q14746 173 188 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 3 0.0077627 90.476 By MS/MS 5 0 1 1 1236800 1236800 0 6076 1457 6264 14981 12191 12191 1 12405 0 IATEKDFLEAVNK VCTEAGMFAIRARRKIATEKDFLEAVNKVI RKIATEKDFLEAVNKVIKSYAKFSATPRYM K I A N K V 2 0 1 1 0 0 2 0 0 1 1 2 0 1 0 0 1 0 0 1 0 0 13 1 1476.7824 P35998 P35998 403 415 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.0066278 111.94 By MS/MS 6.5 0.5 1 1 2 5832900 5832900 0 6077 831 6265 14982;14983 12192 12192 1 71455 0 IAVAVLEETTR HVSRSSTPRESPCGKIAVAVLEETTRERTD PCGKIAVAVLEETTRERTDVIQGDDVADAT K I A T R E 2 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 2 0 0 2 0 0 11 0 1200.6714 P49792;P0DJD0;P0DJD1;Q7Z3J3;A6NKT7 P49792 2467 2477 RANBP2;RGPD1;RGPD2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 yes no 2 7.6194E-05 153.97 By MS/MS 1.5 0.5 1 1 2 210170 210170 0 6078 964 6266 14984;14985 12193;12194 12193 2 50644 0 IAVEFLR FLPQVDSAVVAEFGRIAVEFLRRGANPKIY AVVAEFGRIAVEFLRRGANPKIYEGAARKL R I A L R R 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 846.49634 Q86X83 Q86X83 30 36 COMMD2 COMM domain-containing protein 2 yes yes 2 0.017961 114.72 By MS/MS 9 0 1 1 1418900 1418900 0 6079 1841 6267 14986 12195 12195 1 27925 0 IAVEPVNPSELPK QIFRPLKFNTTSVIKIAVEPVNPSELPKML IKIAVEPVNPSELPKMLDGLRKVNKSYPSL K I A P K M 1 0 1 0 0 0 2 0 0 1 1 1 0 0 3 1 0 0 0 2 0 0 13 0 1391.766 Q15029 Q15029 590 602 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00044804 137.01 By MS/MS By matching 4.4 1.02 1 2 1 1 4 1 14716000 14669000 47632 6080 1476 6268 14987;14988;14989;14990;14991 12196;12197;12198 12196 3 741320 101490 IAVEVVR VFSQPESDEAKAYLRIAVEVVRRLPSPSE_ DEAKAYLRIAVEVVRRLPSPSE________ R I A V R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 7 0 784.48069 Q8TB37 Q8TB37 306 312 NUBPL Iron-sulfur protein NUBPL yes yes 2 0.015433 121.29 By MS/MS 9 0.816 1 1 1 3 2184200 2184200 0 6081 1980 6269 14992;14993;14994 12199 12199 1 31677 0 IAVHCTVR ARYTVRSFGIRRNEKIAVHCTVRGAKAEEI GIRRNEKIAVHCTVRGAKAEEILEKGLKVR K I A V R G 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 2 0 0 8 0 954.50692 P62913 P62913 68 75 RPL11 60S ribosomal protein L11 yes yes 2 0.0057266 122.13 By MS/MS 9.5 0.5 1 1 2 4649500 4649500 0 6082 1186 6270 14995;14996 12200 12200 1 98188 0 IAVVAFFPENGVSDFQK VLNGFSRLNKNDKQRIAVVAFFPENGVSDF VVAFFPENGVSDFQKAQIIGSQRENGWAVG R I A Q K A 2 0 1 1 0 1 1 1 0 1 0 1 0 3 1 1 0 0 0 3 0 0 17 0 1866.9516 Q8IYQ7 Q8IYQ7 401 417 THNSL1 Threonine synthase-like 1 yes yes 2 0.0022874 115.37 By MS/MS 5 0 1 1 0 0 0 6083 1888 6271 14997 12201 12201 1 0 0 IAVYSCPFDGMITETK KKETEGDVTSVKDAKIAVYSCPFDGMITET AVYSCPFDGMITETKGTVLIKTAEELMNFS K I A T K G 1 0 0 1 1 0 1 1 0 2 0 1 1 1 1 1 2 0 1 1 0 0 16 0 1830.8532 P50990 P50990 239 254 CCT8 T-complex protein 1 subunit theta yes yes 2 3.9572E-24 292.73 By MS/MS 6.33 0.943 1 3 1 1 6 23204000 23204000 0 6084 984 6272;6273 14998;14999;15000;15001;15002;15003 12202;12203;12204;12205 12202 536 4 162860 0 IAYFTLPK DNITVRWDLGLNKKRIAYFTLPKTDSGNED LGLNKKRIAYFTLPKTDSGNEDLVIIWLRD R I A P K T 1 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 0 8 0 951.54295 Q92900 Q92900 342 349 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0075048 113.89 By MS/MS 3.5 0.5 1 1 2 495150 495150 0 6085 2077 6274 15004;15005 12206;12207 12206 2 31269 0 IAYQLAVEAESEQK PEHRFELALQLGELKIAYQLAVEAESEQKW KIAYQLAVEAESEQKWKQLAELAISKCQFG K I A Q K W 3 0 0 0 0 2 3 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 14 0 1577.7937 P35606 P35606 656 669 COPB2 Coatomer subunit beta yes yes 2 6.0114E-11 228.61 By MS/MS 1.5 0.5 1 1 2 581700 581700 0 6086 826 6275 15006;15007 12208 12208 1 153590 0 ICAVGITK IIPEIQKVSGNVEKKICAVGITKLLTECPP SGNVEKKICAVGITKLLTECPPMMDTEYTK K I C T K L 1 0 0 0 1 0 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 0 8 0 860.47897 P55060 P55060 841 848 CSE1L Exportin-2 yes yes 2 0.012059 108.46 By MS/MS 4.5 0.5 1 1 2 3953300 3953300 0 6087 1053 6276 15008;15009 12209 12209 1 360760 0 ICDDELILIK EAAMLGQAEEVVQERICDDELILIKNTKAR VVQERICDDELILIKNTKARTSASIILRGA R I C I K N 0 0 0 2 1 0 1 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1230.653 P17987 P17987 356 365 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.39E-06 199.7 By MS/MS By MS/MS 4.58 2.25 2 1 1 1 1 4 1 1 11 1 192950000 192810000 138820 6088 648 6277 15010;15011;15012;15013;15014;15015;15016;15017;15018;15019;15020;15021 12210;12211;12212;12213;12214;12215;12216;12217;12218;12219;12220;12221 12220 12 1995500 142250 ICDDELILIKNTK EAAMLGQAEEVVQERICDDELILIKNTKAR ERICDDELILIKNTKARTSASIILRGANDF R I C T K A 0 0 1 2 1 0 1 0 0 3 2 2 0 0 0 0 1 0 0 0 0 0 13 1 1573.8385 P17987 P17987 356 368 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.2116E-43 336.92 By MS/MS 5.22 2.2 1 1 2 2 2 1 9 26468000 26468000 0 6089 648 6278 15022;15023;15024;15025;15026;15027;15028;15029;15030 12222;12223;12224;12225 12224 4 290920 0 ICDECNYGSYQGR CVICDSYVRPCTLVRICDECNYGSYQGRCV VRICDECNYGSYQGRCVICGGPGVSDAYYC R I C G R C 0 1 1 1 2 1 1 2 0 1 0 0 0 0 0 1 0 0 2 0 0 0 13 0 1620.6297 Q7RTV0 Q7RTV0 45 57 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 7.86E-25 289.59 By MS/MS 10 0 1 1 967720 967720 0 6090 1776 6279 15031 12226 12226 1 52157 0 ICGTGGCLASAPLHQNK QHMGTDVVIVKNGRRICGTGGCLASAPLHQ GTGGCLASAPLHQNKSYFEFKIQSTGIWGI R I C N K S 2 0 1 0 2 1 0 3 1 1 2 1 0 0 1 1 1 0 0 0 0 0 17 0 1782.8505 Q5W111 Q5W111 48 64 SPRYD7 SPRY domain-containing protein 7 yes yes 3 0.024685 75.02 By MS/MS 9 0 1 1 205770 205770 0 6091 1662 6280 15032 12227 12227 1 4049.5 0 ICKGDHWTTR DPMNKLKGQKIVSCRICKGDHWTTRCPYKD IVSCRICKGDHWTTRCPYKDTLGPMQKELA R I C T R C 0 1 0 1 1 0 0 1 1 1 0 1 0 0 0 0 2 1 0 0 0 0 10 1 1272.6033 O75821 O75821 159 168 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 0.0035965 126.39 By MS/MS 7.75 0.829 2 1 1 4 12433000 12433000 0 6092 348 6281 15033;15034;15035;15036 12228;12229 12229 2 192680 0 ICLEIMQR KYKDMNQFGEGEQAKICLEIMQRTGAHLEL GEGEQAKICLEIMQRTGAHLELSLAKDQGL K I C Q R T 0 1 0 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 8 0 1061.5362 Q00341 Q00341 103 110 HDLBP Vigilin yes yes 2 0.0081128 107.66 By MS/MS 3 0 2 2 631900 631900 0 6093 1260 6282;6283 15037;15038 12230;12231 12231 754 2 11562 0 ICNEILTSPCSPEIR QDYQALTVHDNLAMKICNEILTSPCSPEIR ICNEILTSPCSPEIRVYTKALSSLELSSHL K I C I R V 0 1 1 0 2 0 2 0 0 3 1 0 0 0 2 2 1 0 0 0 0 0 15 0 1787.8546 Q9BPX3 Q9BPX3 834 848 NCAPG Condensin complex subunit 3 yes yes 2 0.0004609 206.46 By MS/MS 3.5 0.5 1 1 2 1621200 1621200 0 6094 2279 6284 15039;15040 12232 12232 1 129380 0 ICNQVLVCER IGKKLFTKQTGEKGRICNQVLVCERKYPRR GEKGRICNQVLVCERKYPRREYYFAITMER R I C E R K 0 1 1 0 2 1 1 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1289.622 Q9P2R7 Q9P2R7 151 160 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00061223 131.12 By MS/MS 7.5 0.5 1 1 2 10624000 10624000 0 6095 2690 6285 15041;15042 12233 12233 1 165850 0 ICPIDITLAQR QVTLPGQEPIVKKGRICPIDITLAQRASNK KKGRICPIDITLAQRASNKKVTVVRNLEAY R I C Q R A 1 1 0 1 1 1 0 0 0 3 1 0 0 0 1 0 1 0 0 0 0 0 11 0 1298.7017 P41214 P41214 488 498 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.047348 71.349 By MS/MS 10 0 1 1 110500 110500 0 6096 867 6286 15043 12234 12234 1 5955.4 0 ICPVEFNPNFVAR GSRGFPLRLQATEVRICPVEFNPNFVARMI VRICPVEFNPNFVARMIPKVEWSAFLEAAD R I C A R M 1 1 2 0 1 0 1 0 0 1 0 0 0 2 2 0 0 0 0 2 0 0 13 0 1561.7711 Q9UI30 Q9UI30 32 44 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 0.00042047 139.86 By MS/MS 10 0 1 1 771610 771610 0 6097 2737 6287 15044 12235 12235 1 41587 0 ICQELTAAAR KERTIRGSELPVLERICQELTAAARPFRRL PVLERICQELTAAARPFRRLEASRDQLRQL R I C A R P 3 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1131.5706 Q9BW92 Q9BW92 184 193 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0041696 107.45 By MS/MS 5 0 1 1 2984900 2984900 0 6098 2346 6288 15045 12236 12236 1 29938 0 ICQEVLPK QFHNVKPECLEAYNKICQEVLPKIHEDKHY CLEAYNKICQEVLPKIHEDKHYPCTLVGTW K I C P K I 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 0 985.52665 O75323 O75323 92 99 GBAS Protein NipSnap homolog 2 yes yes 2 0.00774 113.26 By MS/MS 8 0 1 1 4352700 4352700 0 6099 310 6289 15046 12237 12237 1 54953 0 ICQGCPHR AMLSKVLGGSFADQKICQGCPHRYECEESF GSFADQKICQGCPHRYECEESFTTLNVDIR K I C H R Y 0 1 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 8 0 1026.4488 Q93008;O00507 Q93008 1723 1730 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 3 0.049464 79.469 By MS/MS 2 0 1 1 119410 119410 0 6100 2085 6290 15047 12238 12238 1 40390 0 ICRPLLIVEK DIREREIRIYTDAGRICRPLLIVEKQKLLL TDAGRICRPLLIVEKQKLLLKKRHIDQLKE R I C E K Q 0 1 0 0 1 0 1 0 0 2 2 1 0 0 1 0 0 0 0 1 0 0 10 1 1239.7373 P30876 P30876 621 630 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.00069873 121.6 By MS/MS 3.5 0.5 1 1 2 719820 719820 0 6101 781 6291 15048;15049 12239 12239 1 47881 0 ICSKPVVLPK LRNCISTVVHQGLIRICSKPVVLPKGPESE QGLIRICSKPVVLPKGPESESEDHRASGEV R I C P K G 0 0 0 0 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 10 1 1139.6737 P78527 P78527 490 499 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0023251 108.57 By MS/MS 2.62 1.32 2 2 2 1 1 8 4024700 4024700 0 6102 1225 6292 15050;15051;15052;15053;15054;15055;15056;15057 12240;12241;12242;12243;12244 12241 5 899760 0 ICSLHSLPPQS KMKNYNKPWEPKWTKICSLHSLPPQS____ KWTKICSLHSLPPQS_______________ K I C Q S - 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 3 0 0 0 0 0 0 11 0 1237.6125 P03928 P03928 58 68 MT-ATP8 ATP synthase protein 8 yes yes 2 0.0010114 123.21 By MS/MS 10 0 1 1 661260 661260 0 6103 462 6293 15058 12245;12246 12245 2 35640 0 IDAAYFETSK AADLFTDLENAFQGKIDAAYFETSKYLLDV AFQGKIDAAYFETSKYLLDVLNKKYSLLDH K I D S K Y 2 0 0 1 0 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 0 10 0 1143.5448 Q96CW5 Q96CW5 534 543 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 0.015418 89.029 By MS/MS 4 0 1 1 1777000 1777000 0 6104 2128 6294 15059 12247 12247 1 167230 0 IDASKNEEDEGHSNSSPR SGGTEGGSAESEGAKIDASKNEEDEGHSNS SKNEEDEGHSNSSPRHSEAATAQREEWKMF K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 Q14103 Q14103 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 3 0.036693 94.007 By MS/MS 7 0 1 1 0 0 0 6105 1419 6295 15060 12248 12248 1 0 0 IDATSASVLASR ANILKDKDPPIPVAKIDATSASVLASRFDV VAKIDATSASVLASRFDVSGYPTIKILKKG K I D S R F 3 1 0 1 0 0 0 0 0 1 1 0 0 0 0 3 1 0 0 1 0 0 12 0 1189.6303 P13667 P13667 120 131 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.054413 69.346 By MS/MS 5 0 1 1 2463600 2463600 0 6106 604 6296 15061 12249 12249 0 24708 0 IDAVAWNTTPYQLAR KEPRTIKISLPGGQKIDAVAWNTTPYQLAR IDAVAWNTTPYQLARQISSTLADTAVAAQV K I D A R Q 3 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 2 1 1 1 0 0 15 0 1717.8788 Q9BW92 Q9BW92 71 85 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00052971 162.22 By MS/MS 5 0 1 1 2154700 2154700 0 6107 2346 6297 15062 12250 12250 1 21610 0 IDAVNAETIR LCYNRRIPIPELEARIDAVNAETIREVCTK ELEARIDAVNAETIREVCTKYIYNRSPAIA R I D I R E 2 1 1 1 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1100.5826 O75439 O75439 442 451 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.00099724 119.22 By MS/MS 7 0 1 1 2533900 2533900 0 6108 329 6298 15063 12251 12251 1 39778 0 IDCFSEVPTSVFGEK RISRYLANKCSIASRIDCFSEVPTSVFGEK IDCFSEVPTSVFGEKLREQVEERLSFYETG R I D E K L 0 0 0 1 1 0 2 1 0 1 0 1 0 2 1 2 1 0 0 2 0 0 15 0 1713.792 O00567 O00567 382 396 NOP56 Nucleolar protein 56 yes yes 2 8.8975E-05 184.34 By MS/MS 5 0 1 1 737840 737840 0 6109 115 6299 15064 12252 12252 1 7400.2 0 IDCNLLEFK LNLSQQEYYPYVYYKIDCNLLEFK______ PYVYYKIDCNLLEFK_______________ K I D F K - 0 0 1 1 1 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1150.5692 P21283 P21283 374 382 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 2 0.00011249 159.79 By MS/MS 7 0 1 1 1194000 1194000 0 6110 676 6300 15065 12253 12253 1 18743 0 IDDIRKPGESEE QQISLATQMVRMILKIDDIRKPGESEE___ ILKIDDIRKPGESEE_______________ K I D E E - 0 1 0 2 0 0 3 1 0 2 0 1 0 0 1 1 0 0 0 0 0 0 12 2 1386.6627 P48643 P48643 530 541 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0044508 100.82 By MS/MS 6.5 1.12 1 1 1 1 4 20548000 20548000 0 6111 940 6301 15066;15067;15068;15069 12254 12254 1 149540 0 IDDIVSGHK QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ AVLLLRIDDIVSGHKKKGDDQSRQGGAPDA R I D H K K 0 0 0 2 0 0 0 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 9 0 982.50836 P49368 P49368 519 527 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0025078 109.48 By MS/MS By matching 7.42 1.75 2 3 1 2 2 2 11 1 25586000 25566000 19184 6112 947 6302 15070;15071;15072;15073;15074;15075;15076;15077;15078;15079;15080;15081 12255;12256;12257;12258;12259;12260;12261 12257 7 277340 19659 IDDIVSGHKK QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ VLLLRIDDIVSGHKKKGDDQSRQGGAPDAG R I D K K K 0 0 0 2 0 0 0 1 1 2 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1110.6033 P49368 P49368 519 528 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00073588 123.21 By MS/MS 5.33 0.471 2 1 3 24555000 24555000 0 6113 947 6303 15082;15083;15084 12262;12263;12264 12264 3 223360 0 IDDLIKLHPESK KSLKFATEAAITILRIDDLIKLHPESKDDK ILRIDDLIKLHPESKDDKHGSYEDAVHSGA R I D S K D 0 0 0 2 0 0 1 0 1 2 2 2 0 0 1 1 0 0 0 0 0 0 12 1 1406.7769 P17987 P17987 527 538 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.018085 80.69 By MS/MS 6 0 1 1 2915400 2915400 0 6114 648 6304 15085 12265 12265 1 20041 0 IDDSTVAGVAFAR MASAATESPFAQSRRIDDSTVAGVAFARYI RRIDDSTVAGVAFARYILVGCWKNLIDTLS R I D A R Y 3 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 2 0 0 13 0 1320.6674 Q5TH69 Q5TH69 850 862 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 0.00040087 141.89 By MS/MS 2 0 1 1 202950 202950 0 6115 1642 6305 15086 12266 12266 1 68646 0 IDDVVNTR SALTLATETVRSILKIDDVVNTR_______ TVRSILKIDDVVNTR_______________ K I D T R - 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 8 0 930.47706 P50991 P50991 532 539 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0071142 115.7 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 23771000 23724000 47261 6116 985 6306 15087;15088;15089;15090;15091;15092 12267;12268 12267 2 192280 48429 IDEELVTNSGK YLIEYPIDPVTQEFKIDEELVTNSGKFLIL QEFKIDEELVTNSGKFLILDRMLPELKKRG K I D G K F 0 0 1 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1203.5983 Q9NRZ9 Q9NRZ9 590 600 HELLS Lymphoid-specific helicase yes yes 2 0.00026542 164.66 By MS/MS 4 0 1 1 863600 863600 0 6117 2565 6307 15093 12269 12269 1 81270 0 IDELEPR VLELQGLQKNMTRFRIDELEPRRPRYRVPD QKNMTRFRIDELEPRRPRYRVPDVLVADPP R I D P R R 0 1 0 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 7 0 870.4447 Q14697 Q14697 103 109 GANAB Neutral alpha-glucosidase AB yes yes 2 0.012068 130.04 By MS/MS 4 0 1 1 1222600 1222600 0 6118 1454 6308 15094 12270 12270 1 115050 0 IDELQVVK DADPSSLLQDCRLLRIDELQVVKTGGTPKV QDCRLLRIDELQVVKTGGTPKVPDCFQRTP R I D V K T 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 942.5386 O95071 O95071 713 720 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.040398 95.741 By MS/MS 2 0.816 1 1 1 3 1888300 1888300 0 6119 384 6309 15095;15096;15097 12271 12271 1 223750 0 IDESIHLQLR MHALLAIALTMYPMRIDESIHLQLREKYGD MYPMRIDESIHLQLREKYGDKMLRMQKGDP R I D L R E 0 1 0 1 0 1 1 0 1 2 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1222.667 Q9Y262 Q9Y262 382 391 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 0.0002603 143.03 By MS/MS 5.5 0.5 2 2 4 14716000 14716000 0 6120 2814 6310 15098;15099;15100;15101 12272;12273;12274 12273 3 130160 0 IDEYDYSKPIQGQQK KESRGAHAREDYKVRIDEYDYSKPIQGQQK IDEYDYSKPIQGQQKKPFEEHWRKHTLSYV R I D Q K K 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 1 0 0 2 0 0 0 15 1 1810.8737 P31040 P31040 601 615 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2;3 3.4471E-16 254.07 By MS/MS 5.33 0.471 2 1 3 5249100 5249100 0 6121 783 6311 15102;15103;15104 12275;12276 12276 2 50959 0 IDFDSVSSIMASSQ CSQEESIKPKNIVEKIDFDSVSSIMASSQ_ KIDFDSVSSIMASSQ_______________ K I D S Q - 1 0 0 2 0 1 0 0 0 2 0 0 1 1 0 5 0 0 0 1 0 0 14 0 1485.6657 Q9UBQ5 Q9UBQ5 205 218 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.0004845 156.01 By MS/MS 9 0 1 1 265770 265770 0 6122 2703 6312 15105 12277 12277 1 5230.3 0 IDFSSIAVPGTSSPR NADPRPPVQFPNLPRIDFSSIAVPGTSSPR IDFSSIAVPGTSSPRQRQPPGTQQSHSSPG R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0020014 144.28 By MS/MS 6 0 1 1 1475700 1475700 0 6123 1641 6313 15106 12278 12278 1 10145 0 IDGALHR RRNVDPFHIYFCNLKIDGALHRELVKRYQE HIYFCNLKIDGALHRELVKRYQEKWDKLLL K I D H R E 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 780.42424 Q7L0Y3 Q7L0Y3 250 256 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.022145 110.63 By MS/MS 7 0 1 1 2090300 2090300 0 6124 1759 6314 15107 12279 12279 1 32814 0 IDGGITGNMR LLEDFLEHEGYKYERIDGGITGNMRQEAID YKYERIDGGITGNMRQEAIDRFNAPGAQQF R I D M R Q 0 1 1 1 0 0 0 3 0 2 0 0 1 0 0 0 1 0 0 0 0 0 10 0 1032.5022 Q14839 Q14839 1096 1105 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.033043 79.986 By MS/MS 2 0 1 1 314800 314800 0 6125 1459 6315 15108 12280 12280 854 1 106480 0 IDGLLIDQIQR RYFGGMVWYFVNNKKIDGLLIDQIQRDLID NNKKIDGLLIDQIQRDLIDDATNLVQLYHV K I D Q R D 0 1 0 2 0 2 0 1 0 3 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1282.7245 P82650 P82650 281 291 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.00011979 150.15 By MS/MS By matching 7.33 0.471 2 1 2 1 8131300 8093800 37526 6126 1229 6316 15109;15110;15111 12281 12281 1 126360 67583 IDHILDAL NEKLISGKRQELVTKIDHILDAL_______ RQELVTKIDHILDAL_______________ K I D A L - 1 0 0 2 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 8 0 908.49673 P04843 P04843 600 607 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0032791 133.47 By MS/MS By matching 3.5 1.61 1 1 1 3 5 1 9855200 9783100 72121 6127 478 6317 15112;15113;15114;15115;15116;15117 12282;12283;12284 12283 3 174660 60567 IDIIPNPQER SLTDPSKLDSGKELKIDIIPNPQERTLTLV GKELKIDIIPNPQERTLTLVDTGIGMTKAD K I D E R T 0 1 1 1 0 1 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 0 10 0 1193.6404 P08238;Q58FF7 P08238 73 82 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.032012 81.017 By MS/MS By matching 5.67 1.49 2 1 1 1 1 5 1 35363000 35234000 128900 6128 521 6318 15118;15119;15120;15121;15122;15123 12285;12286 12285 2 2885000 274640 IDILDSALLR FEATKNIKVIMATNRIDILDSALLRPGRID MATNRIDILDSALLRPGRIDRKIEFPPPNE R I D L R P 1 1 0 2 0 0 0 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1127.655 P62195 P62195 298 307 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0011359 120.99 By MS/MS 7 0 1 1 74135 74135 0 6129 1142 6319 15124 12287 12287 1 1163.8 0 IDILDSALLRPGR FEATKNIKVIMATNRIDILDSALLRPGRID NRIDILDSALLRPGRIDRKIEFPPPNEEAR R I D G R I 1 2 0 2 0 0 0 1 0 2 3 0 0 0 1 1 0 0 0 0 0 0 13 1 1437.8304 P62195 P62195 298 310 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.00012885 154.84 By MS/MS 7.5 0.5 1 1 2 1025400 1025400 0 6130 1142 6320 15125;15126 12288 12288 1 15947 0 IDILTELR VDSYATQLEAILEQKIDILTELRDKVKSFR EAILEQKIDILTELRDKVKSFRAALQEEEQ K I D L R D 0 1 0 1 0 0 1 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 8 0 971.56515 O00139 O00139 671 678 KIF2A Kinesin-like protein KIF2A yes yes 2 0.013109 107.29 By MS/MS 4 0 1 1 159100 159100 0 6131 82 6321 15127 12289 12289 1 14973 0 IDISNVKIPK LRRTHQKFVIATSTKIDISNVKIPKHLTDA ATSTKIDISNVKIPKHLTDAYFKKKKLRKP K I D P K H 0 0 1 1 0 0 0 0 0 3 0 2 0 0 1 1 0 0 0 1 0 0 10 1 1125.6758 Q02878 Q02878 201 210 RPL6 60S ribosomal protein L6 yes yes 2;3 0.016574 109.29 By MS/MS 7 0 2 2 2350400 2350400 0 6132 1281 6322 15128;15129 12290;12291 12291 2 36897 0 IDISPVLLQK AGFVNHFGRSMSVEKIDISPVLLQKGSTKI MSVEKIDISPVLLQKGSTKIALYGLGSIPD K I D Q K G 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1124.6805 P49959 P49959 162 171 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.0010691 122.28 By MS/MS 4.5 0.5 1 1 2 1052800 1052800 0 6133 970 6323 15130;15131 12292 12292 1 40890 0 IDKQIDFR KFGEKVTQLTDRWQRIDKQIDFRLWDLEKQ LTDRWQRIDKQIDFRLWDLEKQIKQLRNYR R I D F R L 0 1 0 2 0 1 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 8 1 1033.5556 P15924 P15924 870 877 DSP Desmoplakin yes yes 3 0.042029 76.221 By MS/MS 2 0 1 1 240650 240650 0 6134 628 6324 15132 12293 12293 1 81398 0 IDKVNEIVETNRPDSK QELSRFIAAGRLHCKIDKVNEIVETNRPDS DKVNEIVETNRPDSKNWQYQETIKKGDLLL K I D S K N 0 1 2 2 0 0 2 0 0 2 0 2 0 0 1 1 1 0 0 2 0 0 16 2 1855.964 Q15008 Q15008 347 362 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 3;4 0.00028724 140.49 By MS/MS 7 0 2 2 5090400 5090400 0 6135 1471 6325 15133;15134 12294;12295 12294 2 79910 0 IDKWDGSAVK SGLLDKWKIDDKPVKIDKWDGSAVKNSLDD DKPVKIDKWDGSAVKNSLDDSAKKVLLEKY K I D V K N 1 0 0 2 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 0 0 10 1 1117.5768 Q15005 Q15005 48 57 SPCS2 Signal peptidase complex subunit 2 yes yes 3 0.014159 101.66 By MS/MS 9 0 1 1 147390 147390 0 6136 1469 6326 15135 12296 12296 1 2900.7 0 IDLAVLLGK VPLPAENVTITAGQRIDLAVLLGKTPSTME ITAGQRIDLAVLLGKTPSTMENDSSNLDPS R I D G K T 1 0 0 1 0 0 0 1 0 1 3 1 0 0 0 0 0 0 0 1 0 0 9 0 940.59572 Q14157 Q14157 282 290 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 0.050125 85.161 By MS/MS 4 0 1 1 0 0 0 6137 1424 6327 15136 12297 12297 1 0 0 IDLFDFQR RAWNVLALDGSNWQRIDLFDFQRDIEGRVV DGSNWQRIDLFDFQRDIEGRVVENISKRCG R I D Q R D 0 1 0 2 0 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1052.5291 Q96IG2 Q96IG2 68 75 FBXL20 F-box/LRR-repeat protein 20 yes yes 2 0.0019304 143.89 By MS/MS 7.5 0.5 1 1 2 823890 823890 0 6138 2173 6328 15137;15138 12298 12298 1 12816 0 IDLGFGTK VKCTTLIEQQFTYGKIDLGFGTKVADSELC QQFTYGKIDLGFGTKVADSELCKLAADVIL K I D T K V 0 0 0 1 0 0 0 2 0 1 1 1 0 1 0 0 1 0 0 0 0 0 8 0 849.45962 Q8TCG1 Q8TCG1 458 465 KIAA1524 Protein CIP2A yes yes 2 0.042956 85.161 By MS/MS 4 0 1 1 1469100 1469100 0 6139 1990 6329 15139 12299 12299 1 138250 0 IDLLAQPR SSTSKPPTGRRNISRIDLLAQPRRTRLGSL GRRNISRIDLLAQPRRTRLGSLSARSDSEA R I D P R R 1 1 0 1 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 8 0 924.53927 Q5SW79 Q5SW79 1147 1154 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.025647 93.374 By MS/MS 2.5 0.5 1 1 2 3056900 3056900 0 6140 1623 6330 15140;15141 12300 12300 1 805220 0 IDLPAENSNSETIIITGK GGANIKKIREESNTKIDLPAENSNSETIII PAENSNSETIIITGKRANCEAARSRILSIQ K I D G K R 1 0 2 1 0 0 2 1 0 4 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1913.9946 Q00341 Q00341 615 632 HDLBP Vigilin yes yes 2 0.00016294 134.37 By MS/MS 3.5 0.5 1 1 2 565620 565620 0 6141 1260 6331 15142;15143 12301 12301 1 39721 0 IDLPEYQGEPDEISIQK QILGDKFPCTLVAQKIDLPEYQGEPDEISI LPEYQGEPDEISIQKCQEAVRQVQGPVLVE K I D Q K C 0 0 0 2 0 2 3 1 0 3 1 1 0 0 2 1 0 0 1 0 0 0 17 0 1972.963 Q9BY32 Q9BY32 40 56 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.00037446 131.35 By MS/MS 9 0 1 1 214010 214010 0 6142 2363 6332 15144 12302 12302 1 4211.8 0 IDLTLLNR CNVMLESRFEKMYEKIDLTLLNRLLRLIVD FEKMYEKIDLTLLNRLLRLIVDHNIADYMT K I D N R L 0 1 1 1 0 0 0 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 8 0 956.56548 Q6P2Q9 Q6P2Q9 988 995 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0007823 155 By MS/MS 2.5 0.5 1 1 2 1023200 1023200 0 6143 1708 6333 15145;15146 12303 12303 1 312430 0 IDNYFDLR EFVHGLLENAIYGGRIDNYFDLRVLQSYLK NAIYGGRIDNYFDLRVLQSYLKQFFNSSVI R I D L R V 0 1 1 2 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1054.5084 Q8NCM8 Q8NCM8 3931 3938 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0085892 123.21 By MS/MS 1.5 0.5 1 1 2 122370 122370 0 6144 1952 6334 15147;15148 12304;12305 12305 2 29487 0 IDQTQRK AFVIDAVRTKMVYCKIDQTQRKVVVSHSTH RTKMVYCKIDQTQRKVVVSHSTHRTFGKQQ K I D R K V 0 1 0 1 0 2 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 7 1 887.48248 Q7L2H7 Q7L2H7 325 331 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.041758 129.68 By MS/MS 8.5 1.12 1 1 1 1 4 1722000 1722000 0 6145 1762 6335 15149;15150;15151;15152 12306 12306 1 27593 0 IDQYQGADAVGLEEK ISATPTFLFFRNKVRIDQYQGADAVGLEEK IDQYQGADAVGLEEKIKQHLENDPGSNEDT R I D E K I 2 0 0 2 0 2 2 2 0 1 1 1 0 0 0 0 0 0 1 1 0 0 15 0 1634.7788 O43396 O43396 88 102 TXNL1 Thioredoxin-like protein 1 yes yes 2 3.6159E-11 239.38 By MS/MS 7.5 0.5 1 1 2 1705100 1705100 0 6146 207 6336 15153;15154 12307;12308 12307 2 23481 0 IDREGKPR VDDNKKLGEWVGLCKIDREGKPRKVVGCSC EWVGLCKIDREGKPRKVVGCSCVVVKDYGK K I D P R K 0 2 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 8 2 969.53558 P25398 P25398 94 101 RPS12 40S ribosomal protein S12 yes yes 3 0.037195 107.01 By MS/MS 10 0 1 1 3200200 3200200 0 6147 721 6337 15155 12309 12309 1 172480 0 IDRQESSR NKELNQVMEQLGDARIDRQESSRQQRKAEI EQLGDARIDRQESSRQQRKAEIMESIKRLY R I D S R Q 0 2 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 8 1 989.48902 Q14683 Q14683 489 496 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.052359 111.17 By MS/MS 3 0 1 1 0 0 0 6148 1451 6338 15156 12310 12310 1 0 0 IDRTDAISEEK DETISNVPILILGNKIDRTDAISEEKLREI LGNKIDRTDAISEEKLREIFGLYGQTTGKG K I D E K L 1 1 0 2 0 0 2 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 11 1 1275.6307 Q9NR31 Q9NR31 136 146 SAR1A GTP-binding protein SAR1a yes yes 2 0.0062673 123.11 By MS/MS 9 0 1 1 392180 392180 0 6149 2546 6339 15157 12311 12311 1 7718.1 0 IDSANMNDDITTSLR INSKASLTYAEAQLRIDSANMNDDITTSLR IDSANMNDDITTSLRGLNKLAKILKKRRIE R I D L R G 1 1 2 3 0 0 0 0 0 2 1 0 1 0 0 2 2 0 0 0 0 0 15 0 1664.7676 Q9Y2L1 Q9Y2L1 597 611 DIS3 Exosome complex exonuclease RRP44 yes yes 2 3.6496E-09 225.72 By MS/MS 4 0 1 1 1138600 1138600 0 6150 2834 6340 15158 12312 12312 1 107150 0 IDSIADHVNSAAVNVEEGTK LVTDFSLLVNSQQEKIDSIADHVNSAAVNV DHVNSAAVNVEEGTKNLGKAAKYKLAALPV K I D T K N 3 0 2 2 0 0 2 1 1 2 0 1 0 0 0 2 1 0 0 3 0 0 20 0 2068.0073 P56962 P56962 200 219 STX17 Syntaxin-17 yes yes 3 0.00068827 103.73 By MS/MS 7 0 1 1 923840 923840 0 6151 1077 6341 15159 12313 12313 1 14503 0 IDSILEVVQTGR YLEHGEYEGNLYGTKIDSILEVVQTGRTCI GTKIDSILEVVQTGRTCILDVNPQALKVLR K I D G R T 0 1 0 1 0 1 1 1 0 2 1 0 0 0 0 1 1 0 0 2 0 0 12 0 1328.73 Q9NZW5 Q9NZW5 419 430 MPP6 MAGUK p55 subfamily member 6 yes yes 2 1.1067E-13 247.31 By MS/MS 6 0 1 1 613610 613610 0 6152 2657 6342 15160 12314 12314 1 4218.1 0 IDTIEIITDR TEEHHLRDYFEEYGKIDTIEIITDRQSGKK EEYGKIDTIEIITDRQSGKKRGFGFVTFDD K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 9.3772E-06 174.86 By MS/MS 7 0 1 1 787140 787140 0 6153 694 6343 15161 12315 12315 1 12357 0 IDTLGLLCESNR ARIKQGLIHQHCQVRIDTLGLLCESNRSTE QVRIDTLGLLCESNRSTEIVSMEEMQWIQF R I D N R S 0 1 1 1 1 0 1 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 0 1389.6922 Q6YHU6 Q6YHU6 639 650 THADA Thyroid adenoma-associated protein yes yes 2 4.1574E-06 208.84 By MS/MS 2 0 1 1 426310 426310 0 6154 1739 6344 15162 12316 12316 1 144200 0 IDTRNELESYAYSLK DAEKFAEEDKKLKERIDTRNELESYAYSLK IDTRNELESYAYSLKNQIGDKEKLGGKLSS R I D L K N 1 1 1 1 0 0 2 0 0 1 2 1 0 0 0 2 1 0 2 0 0 0 15 1 1800.8894 P11021 P11021 559 573 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0047671 134.02 By MS/MS 5 0 1 1 5169300 5169300 0 6155 571 6345 15163 12317 12317 1 51846 0 IDVFSPVEFNK DTNLLSNIQKLFSERIDVFSPVEFNKVSVL FSERIDVFSPVEFNKVSVLTGIIKISLKTL R I D N K V 0 0 1 1 0 0 1 0 0 1 0 1 0 2 1 1 0 0 0 2 0 0 11 0 1293.6605 Q9UID3 Q9UID3 686 696 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 6.6519E-06 176.33 By MS/MS 4.5 0.5 1 1 2 880650 880650 0 6156 2741 6346 15164;15165 12318;12319 12319 2 57699 0 IDVHRKENAGAAEK EGATIRNITKQTQSKIDVHRKENAGAAEKA KIDVHRKENAGAAEKAISVHSTPEGCSSAC K I D E K A 3 1 1 1 0 0 2 1 1 1 0 2 0 0 0 0 0 0 0 1 0 0 14 2 1536.8009 Q9NZI8;O00425 Q9NZI8 229 242 IGF2BP1;IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 3 yes no 3 0.024691 78.985 By MS/MS 5 0 1 1 637540 637540 0 6157 2649 6347 15166 12320 12320 1 6394.2 0 IDVLLDTFR ITGQHRNGVISARTRIDVLLDTFRRKQPFT ISARTRIDVLLDTFRRKQPFTHFLAFFLNE R I D F R R 0 1 0 2 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 0 9 0 1090.6023 Q8N9N2 Q8N9N2 148 156 ASCC1 Activating signal cointegrator 1 complex subunit 1 yes yes 2 0.007968 104.01 By MS/MS 7 0 1 1 246630 246630 0 6158 1935 6348 15167 12321 12321 1 3871.6 0 IDYIAGLDSR IGLLARHLKATHGGRIDYIAGLDSRGFLFG THGGRIDYIAGLDSRGFLFGPSLAQELGLG R I D S R G 1 1 0 2 0 0 0 1 0 2 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1121.5717 P07741 P07741 58 67 APRT Adenine phosphoribosyltransferase yes yes 2 0.0092521 96.015 By MS/MS 9 0 1 1 309840 309840 0 6159 511 6349 15168 12322 12322 1 6097.8 0 IEAACFATIK VMMLRHMGLFDHAARIEAACFATIKDGKSL DHAARIEAACFATIKDGKSLTKDLGGNAKC R I E I K D 3 0 0 0 1 0 1 0 0 2 0 1 0 1 0 0 1 0 0 0 0 0 10 0 1122.5743 P50213 P50213 327 336 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.000196 147.4 By MS/MS 7 0 1 1 2261800 2261800 0 6160 971 6350 15169 12323 12323 1 35507 0 IEAINQAIANEYEVR KPLLKKPMGPAHWEKIEAINQAIANEYEVR IEAINQAIANEYEVRRKLLIKRLDVTVQSF K I E V R R 3 1 2 0 0 1 3 0 0 3 0 0 0 0 0 0 0 0 1 1 0 0 15 0 1731.8792 Q8NCA5 Q8NCA5 204 218 FAM98A Protein FAM98A yes yes 2 2.2322E-11 242.8 By MS/MS 6.5 0.5 1 1 2 5931000 5931000 0 6161 1950 6351 15170;15171 12324 12324 1 43818 0 IEALQADNDFTNER KIDEMEEKEQELQAKIEALQADNDFTNERL KIEALQADNDFTNERLTALQVRLEHLQEKT K I E E R L 2 1 2 2 0 1 2 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 14 0 1634.7536 Q14BN4 Q14BN4 360 373 SLMAP Sarcolemmal membrane-associated protein yes yes 2 2.2348E-07 214.61 By MS/MS 4 0 1 1 2194800 2194800 0 6162 1465 6352 15172 12325 12325 1 206550 0 IEANEALVK VGTADEATRAEIQIRIEANEALVKALE___ AEIQIRIEANEALVKALE____________ R I E V K A 2 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 0 985.54441 P30049 P30049 157 165 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 5.8801E-05 162.88 By MS/MS By MS/MS 10 0 2 1 1 24574000 24406000 167850 6163 765 6353 15173;15174 12326;12327 12327 2 1315400 214890 IEANEALVKALE VGTADEATRAEIQIRIEANEALVKALE___ QIRIEANEALVKALE_______________ R I E L E - 3 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 1 1298.7082 P30049 P30049 157 168 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 0.00031019 163.45 By MS/MS 10 0 1 1 1277100 1277100 0 6164 765 6354 15175 12328 12328 1 68831 0 IECDDKGDGSCDVR VGTLGFSVEGPSQAKIECDDKGDGSCDVRY KIECDDKGDGSCDVRYWPQEAGEYAVHVLC K I E V R Y 0 1 0 4 2 0 1 2 0 1 0 1 0 0 0 1 0 0 0 1 0 0 14 1 1624.6457 P21333 P21333 621 634 FLNA Filamin-A no no 2;3 0.0058985 97.779 By MS/MS 2 0.707 1 2 1 4 1933700 1933700 0 6165 677 6355 15176;15177;15178;15179 12329;12330 12329 2 628530 0 IEDDNDNAPYFEHR ADGYAPEYPLPLIIKIEDDNDNAPYFEHRV KIEDDNDNAPYFEHRVTIFTVPENCRSGTS K I E H R V 1 1 2 3 0 0 2 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 14 0 1733.7281 Q08554 Q08554 232 245 DSC1 Desmocollin-1 yes yes 2;3 0.00034237 143.42 By matching By MS/MS 3 1.1 1 2 2 2 3 2731200 562110 2169100 6166 1311 6356 15180;15181;15182;15183;15184 12331;12332;12333 12333 3 52898 367800 IEDETQVSR KSIMDNFTEIIKTAKIEDETQVSRATQGEQ IIKTAKIEDETQVSRATQGEQDNYEMHVRA K I E S R A 0 1 0 1 0 1 2 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 1075.5146 Q15528 Q15528 42 50 MED22 Mediator of RNA polymerase II transcription subunit 22 yes yes 2 0.00010468 161.27 By MS/MS 10 0 1 1 579920 579920 0 6167 1519 6357 15185 12334 12334 1 31256 0 IEDFLER LDEGKMKLDYILGLKIEDFLERRLQTQVFK LDYILGLKIEDFLERRLQTQVFKLGLAKSI K I E E R R 0 1 0 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 920.46035 P46781 P46781 102 108 RPS9 40S ribosomal protein S9 yes yes 2 0.0080496 143.11 By MS/MS 9.5 0.5 1 1 2 24700000 24700000 0 6168 918 6358 15186;15187 12335;12336 12335 2 500100 0 IEDFLERR LDEGKMKLDYILGLKIEDFLERRLQTQVFK DYILGLKIEDFLERRLQTQVFKLGLAKSIH K I E R R L 0 2 0 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 1 1076.5615 P46781 P46781 102 109 RPS9 40S ribosomal protein S9 yes yes 2 0.0048011 148.99 By MS/MS 8.5 1.12 1 1 1 1 4 9484700 9484700 0 6169 918 6359 15188;15189;15190;15191 12337 12337 1 184200 0 IEDLEEGQQVIR KDLMHGLITLMLDSRIEDLEEGQQVIRSVN DSRIEDLEEGQQVIRSVNLLVVKVLEKSDQ R I E I R S 0 1 0 1 0 2 3 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 12 0 1427.7256 Q14008 Q14008 1655 1666 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 4.5629E-18 260.98 By MS/MS 3 1.41 1 1 1 1 1 5 3844200 3844200 0 6170 1417 6360 15192;15193;15194;15195;15196 12338;12339;12340 12338 2 962620 0 IEDLSQQAQLAAAEK KSPASDTYIVFGEAKIEDLSQQAQLAAAEK IEDLSQQAQLAAAEKFKVQGEAVSNIQENT K I E E K F 4 0 0 1 0 3 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1613.8261 Q13765;E9PAV3 Q13765 128 142 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 7.0826E-22 231.74 By MS/MS By MS/MS 7 0 2 1 1 6668700 6587500 81183 6171 75 6361 15197;15198 12341;12342;12343 12341 3 103410 146210 IEDPSLLNSR SIFEAAKQELAKLMRIEDPSLLNSRVLLHH AKLMRIEDPSLLNSRVLLHHAKAGTIIARQ R I E S R V 0 1 1 1 0 0 1 0 0 1 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1142.5932 Q8IY17 Q8IY17 518 527 PNPLA6 Neuropathy target esterase yes yes 2 0.0085494 97.597 By MS/MS 3 0 1 1 733810 733810 0 6172 1880 6362 15199 12344 12344 1 13427 0 IEDSGKRGNTMAER ______________________________ MIEDSGKRGNTMAERRQLFAEMRAQDLDRI M I E E R R 1 2 1 1 0 0 2 2 0 1 0 1 1 0 0 1 1 0 0 0 0 0 14 2 1562.7471 Q9Y4J8 Q9Y4J8 2 15 DTNA Dystrobrevin alpha yes yes 2 0.0092868 73.841 By MS/MS 5 0 1 1 646300 646300 0 6173 2897 6363 15200 12345 12345 1206 1 6482.1 0 IEDSTGLNRPGPAPLSSR ASENGLEDIDRILERIEDSTGLNRPGPAPL STGLNRPGPAPLSSRKHVLYVEHRHLNPDT R I E S R K 1 2 1 1 0 0 1 2 0 1 2 0 0 0 3 3 1 0 0 0 0 0 18 1 1865.9595 Q9BQ70 Q9BQ70 157 174 TCF25 Transcription factor 25 yes yes 3 0.00013218 143.46 By MS/MS 5 0 1 1 2410900 2410900 0 6174 2284 6364 15201 12346 12346 1 24180 0 IEDTVFHVFDK PNPQLIYDDEIPSLKIEDTVFHVFDKVKVK PSLKIEDTVFHVFDKVKVKIMLDSSNLQHQ K I E D K V 0 0 0 2 0 0 1 0 1 1 0 1 0 2 0 0 1 0 0 2 0 0 11 0 1348.6663 Q9Y2L1 Q9Y2L1 896 906 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.029044 80.916 By MS/MS 4 0 1 1 288010 288010 0 6175 2834 6365 15202 12347 12347 1 27103 0 IEDVTPIPSDSTR SALRALARSGMKIGRIEDVTPIPSDSTRRK GRIEDVTPIPSDSTRRKGGRRGRRL_____ R I E T R R 0 1 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 13 0 1428.7096 P62263 P62263 129 141 RPS14 40S ribosomal protein S14 yes yes 2 3.7842E-09 201.46 By MS/MS By MS/MS 10 0 3 2 1 61468000 60576000 892480 6176 1147 6366 15203;15204;15205 12348;12349;12350;12351 12349 4 3264800 1142600 IEDVTPIPSDSTRR SALRALARSGMKIGRIEDVTPIPSDSTRRK RIEDVTPIPSDSTRRKGGRRGRRL______ R I E R R K 0 2 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 14 1 1584.8107 P62263 P62263 129 142 RPS14 40S ribosomal protein S14 yes yes 2 9.5155E-07 211.86 By MS/MS By matching 10 0 2 1 1 6555000 6458200 96853 6177 1147 6367 15206;15207 12352 12352 1 348070 124000 IEDYFPEFAR KQDLLAEKVLAGKSKIEDYFPEFARYTTPE AGKSKIEDYFPEFARYTTPEDATPEPGEDP K I E A R Y 1 1 0 1 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 10 0 1285.5979 P63092;Q5JWF2 P63092 308 317 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.0008606 126.31 By MS/MS 7 0 1 1 328990 328990 0 6178 1193 6368 15208 12353 12353 1 5164.6 0 IEEACEIYAR NSQSFFSGLFGGSSKIEEACEIYARAANMF GGSSKIEEACEIYARAANMFKMAKNWSAAG K I E A R A 2 1 0 0 1 0 3 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1252.5758 P54920 P54920 38 47 NAPA Alpha-soluble NSF attachment protein yes yes 2 2.5288E-05 164.46 By MS/MS 8 0 1 1 4353800 4353800 0 6179 1049 6369 15209 12354 12354 1 54967 0 IEEEEQEPEPPEPFEYIDD DIEELVEPVAAHGPKIEEEEQEPEPPEPFE EQEPEPPEPFEYIDD_______________ K I E D D - 0 0 0 2 0 1 8 0 0 2 0 0 0 1 4 0 0 0 1 0 0 0 19 0 2332.9747 Q99460 Q99460 935 953 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0030786 93.348 By MS/MS 4 0 1 1 2150600 2150600 0 6180 2246 6370 15210 12355 12355 1 202390 0 IEEIKDFLLTAR ______________________________ PRKIEEIKDFLLTARRKDAKSVKIKKNKDN K I E A R R 1 1 0 1 0 0 2 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 12 1 1446.8082 P63173 P63173 5 16 RPL38 60S ribosomal protein L38 yes yes 2 0.046115 90.913 By MS/MS 10 0 1 1 119910 119910 0 6181 1197 6371 15211 12356 12356 1 6462.9 0 IEELFSIVR CHVQRFFYRIYASLRIEELFSIVRDFPDSR IYASLRIEELFSIVRDFPDSRPAIEDLKYC R I E V R D 0 1 0 0 0 0 2 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 9 0 1104.6179 Q9UJX6 Q9UJX6 341 349 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 2.4783E-10 205.36 By MS/MS 4.5 0.5 1 1 2 506520 506520 0 6182 2754 6372 15212;15213 12357 12357 1 40280 0 IEELQLIVNDK EGKAGSGLRQYYLSKIEELQLIVNDKSQNL YLSKIEELQLIVNDKSQNLRRLQAQRNELN K I E D K S 0 0 1 1 0 1 2 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1312.7238 P62195 P62195 28 38 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.010554 113.67 By MS/MS 10 0 1 1 29208 29208 0 6183 1142 6373 15214 12358 12358 0 1574.2 0 IEENSLKEEESIEGEKEVK PNTPAPVPPAEDGIKIEENSLKEEESIEGE SLKEEESIEGEKEVKSTAPETAIECTQAPA K I E V K S 0 0 1 0 0 0 8 1 0 2 1 3 0 0 0 2 0 0 0 1 0 0 19 2 2218.0853 Q14839 Q14839 1566 1584 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 4 0.030706 56.906 By MS/MS 2 0 1 1 219420 219420 0 6184 1459 6374 15215 12359 12359 1 74216 0 IEEQEEQR DQGPKTIEQIHKEAKIEEQEEQRKVQQLMT QIHKEAKIEEQEEQRKVQQLMTKEKRRPGV K I E Q R K 0 1 0 0 0 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1059.4833 O43432 O43432 1005 1012 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0025323 138.06 By MS/MS 2 0 1 1 692820 692820 0 6185 210 6375 15216 12360 12360 1 234340 0 IEEQEEQRK DQGPKTIEQIHKEAKIEEQEEQRKVQQLMT IHKEAKIEEQEEQRKVQQLMTKEKRRPGVQ K I E R K V 0 1 0 0 0 2 4 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 1 1187.5782 O43432 O43432 1005 1013 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0040665 131.62 By MS/MS 2 0 1 1 128780 128780 0 6186 210 6376 15217 12361 12361 1 43558 0 IEESDQGPYAIILAPTR IPLLVWITTLPKIDRIEESDQGPYAIILAP ESDQGPYAIILAPTRELAQQIEEETIKFGK R I E T R E 2 1 0 1 0 1 2 1 0 3 1 0 0 0 2 1 1 0 1 0 0 0 17 0 1871.9629 Q9BUQ8 Q9BUQ8 462 478 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.00012303 185.27 By MS/MS 4.5 0.5 1 1 2 759570 759570 0 6187 2326 6377 15218;15219 12362 12362 1 62239 0 IEEVPELPLVVEDK AASALPALVMSKGHRIEEVPELPLVVEDKV RIEEVPELPLVVEDKVEGYKKTKEAVLLLK R I E D K V 0 0 0 1 0 0 4 0 0 1 2 1 0 0 2 0 0 0 0 3 0 0 14 0 1607.8658 P36578 P36578 144 157 RPL4 60S ribosomal protein L4 yes yes 2 0.00046152 150.09 By MS/MS By matching 6.33 0.471 2 1 2 1 4933000 4893600 39420 6188 838 6378 15220;15221;15222 12363;12364;12365;12366 12364 4 39460 40395 IEEVSDTSSLQPQASLK DLFPTSDTPRAKVLKIEEVSDTSSLQPQAS EVSDTSSLQPQASLKQDVCQSYSEKMPIEI K I E L K Q 1 0 0 1 0 2 2 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 17 0 1830.9211 Q9H6T3 Q9H6T3 499 515 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 4.7267E-24 273.07 By MS/MS 5 0 1 1 1318100 1318100 0 6189 2459 6379 15223 12367 12367 1 13219 0 IEFSLPDLEGR TLDPALMRPGRLDRKIEFSLPDLEGRTHIF LDRKIEFSLPDLEGRTHIFKIHARSMSVER K I E G R T 0 1 0 1 0 0 2 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1274.6507 P35998 P35998 341 351 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.00085777 132.01 By MS/MS 7 0 1 1 249640 249640 0 6190 831 6380 15224 12368 12368 1 3919 0 IEGDETSTEAATR RADQFEYVMYGKVYRIEGDETSTEAATRLS YRIEGDETSTEAATRLSAYVSYGGLLMRLQ R I E T R L 2 1 0 1 0 0 3 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 13 0 1378.6212 P52434 P52434 99 111 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2 5.6466E-17 255.52 By MS/MS 10 0 1 1 2834200 2834200 0 6191 1016 6381 15225 12369 12369 1 152750 0 IEGDPQGVQQAK SVRIPPDSEKSNLIRIEGDPQGVQQAKREL LIRIEGDPQGVQQAKRELLELASRMENERT R I E A K R 1 0 0 1 0 3 1 2 0 1 0 1 0 0 1 0 0 0 0 1 0 0 12 0 1268.6361 Q00341 Q00341 483 494 HDLBP Vigilin yes yes 2 2.3837E-05 175.65 By MS/MS 4 1.41 1 1 1 1 1 5 7091000 7091000 0 6192 1260 6382 15226;15227;15228;15229;15230 12370;12371 12370 2 276310 0 IEGDPQGVQQAKR SVRIPPDSEKSNLIRIEGDPQGVQQAKREL IRIEGDPQGVQQAKRELLELASRMENERTK R I E K R E 1 1 0 1 0 3 1 2 0 1 0 1 0 0 1 0 0 0 0 1 0 0 13 1 1424.7372 Q00341 Q00341 483 495 HDLBP Vigilin yes yes 2 6.2999E-05 174.57 By MS/MS 3.5 0.5 1 1 2 486670 486670 0 6193 1260 6383 15231;15232 12372 12372 1 18037 0 IEGLLAAFPK KAIVSRQFVEMTRTRIEGLLAAFPKLMNTG MTRTRIEGLLAAFPKLMNTGKQHTFVETES R I E P K L 2 0 0 0 0 0 1 1 0 1 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1057.6172 P48444 P48444 29 38 ARCN1 Coatomer subunit delta yes yes 2 0.00035984 136.27 By MS/MS 7 0.816 1 1 1 3 4755000 4755000 0 6194 934 6384 15233;15234;15235 12373;12374;12375 12373 3 34681 0 IEGSGDQVDTLELSGGAR LLQMVQQFGVDFEKRIEGSGDQVDTLELSG SGDQVDTLELSGGARINRIFHERFPFELVK R I E A R I 1 1 0 2 0 1 2 4 0 1 2 0 0 0 0 2 1 0 0 1 0 0 18 0 1802.8646 P50570 P50570 344 361 DNM2 Dynamin-2 yes yes 2 1.7206E-33 298.78 By MS/MS 4 0 1 1 1826000 1826000 0 6195 977 6385 15236 12376 12376 1 171830 0 IEGTPLETIQK HGHHKMELPDYRQWKIEGTPLETIQKKLAA RQWKIEGTPLETIQKKLAAKGLRDPWGRNE K I E Q K K 0 0 0 0 0 1 2 1 0 2 1 1 0 0 1 0 2 0 0 0 0 0 11 0 1227.6711 O43676 O43676 24 34 NDUFB3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes yes 2 0.0012037 117.53 By MS/MS 10 0 1 1 1011000 1011000 0 6196 224 6386 15237 12377 12377 1 54488 0 IEGTQADTR KEKMFTILERTVTTRIEGTQADTRESDKMW RTVTTRIEGTQADTRESDKMWLVRHLEIIR R I E T R E 1 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 9 0 989.47779 O60645 O60645 260 268 EXOC3 Exocyst complex component 3 yes yes 2 0.013856 104.01 By MS/MS 5 0 1 1 0 0 0 6197 267 6387 15238 12378 12378 1 0 0 IEGVLLLGEPVR RRLKTTPLPRNDFPRIEGVLLLGEPVRWET FPRIEGVLLLGEPVRWETSLQLIMDVLLSN R I E V R W 0 1 0 0 0 0 2 2 0 1 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1293.7656 Q9BXW7 Q9BXW7 189 200 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 2.3149E-05 175.86 By MS/MS 7 0.816 1 1 1 3 5721800 5721800 0 6198 2361 6388 15239;15240;15241 12379;12380 12380 2 88126 0 IEHIKHSK KQVKGKILAKRINVRIEHIKHSKSRDSFLK AKRINVRIEHIKHSKSRDSFLKRVKENDQK R I E S K S 0 0 0 0 0 0 1 0 2 2 0 2 0 0 0 1 0 0 0 0 0 0 8 1 990.56106 P46778 P46778 93 100 RPL21 60S ribosomal protein L21 yes yes 2 0.021387 128.61 By MS/MS 9 0 1 1 99537 99537 0 6199 916 6389 15242 12381 12381 1 1958.9 0 IEIDPQFQVVR IQEVTINQNLLTPLKIEIDPQFQVVRTQET TPLKIEIDPQFQVVRTQETQEIRTLNNQFA K I E V R T 0 1 0 1 0 2 1 0 0 2 0 0 0 1 1 0 0 0 0 2 0 0 11 0 1342.7245 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 98 108 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.019398 82.417 By MS/MS 3 0 1 1 548390 0 548390 + 6200 70 6390 15243 12382 12382 1 0 69802 IEILAPPNGSVPGDR VLSQAMVMCASSPEKIEILAPPNGSVPGDR IEILAPPNGSVPGDRITFDAFPGEPDKELN K I E D R I 1 1 1 1 0 0 1 2 0 2 1 0 0 0 3 1 0 0 0 1 0 0 15 0 1533.8151 Q12904 Q12904 236 250 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.00039089 137.01 By MS/MS 6.5 0.5 1 1 2 2887600 2887600 0 6201 1337 6391 15244;15245 12383 12383 1 40003 0 IEISELNR QVTVGRHGDSLKEIKIEISELNRVIQRLQG DSLKEIKIEISELNRVIQRLQGEIAHVKKQ K I E N R V 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 972.52401 CON__P04264;P04264;CON__P35908v2;CON__P35908;P35908 CON__P35908v2 394 401 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 2 4.5324E-06 195.81 By MS/MS By MS/MS 5.17 2.83 2 2 2 2 2 2 2 1 1 2 9 9 167610000 92780000 74831000 + 6202 55;471;45 6392 15246;15247;15248;15249;15250;15251;15252;15253;15254;15255;15256;15257;15258;15259;15260;15261;15262;15263 12384;12385;12386;12387;12388;12389;12390;12391;12392;12393;12394;12395;12396;12397;12398;12399;12400;12401 12394 18 6948900 39727000 IEISSPCCPR RPISSCSQRRGPKCRIEISSPCCPRQVPPQ GPKCRIEISSPCCPRQVPPQRCPVEIPPIR R I E P R Q 0 1 0 0 2 0 1 0 0 2 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1217.5533 Q5T749 Q5T749 327 336 KPRP Keratinocyte proline-rich protein yes yes 2 0.00063464 140.35 By matching By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 1 9 3906300 125740 3780500 6203 1636 6393 15264;15265;15266;15267;15268;15269;15270;15271;15272;15273 12402;12403;12404;12405;12406;12407;12408;12409;12410;12411 12408 10 2474.6 4987200 IEITSLLPSR SVISSWLSTDPAKDRIEITSLLPSRSLSVN PAKDRIEITSLLPSRSLSVNTLDVLGPCLV R I E S R S 0 1 0 0 0 0 1 0 0 2 2 0 0 0 1 2 1 0 0 0 0 0 10 0 1127.655 Q8NFH3 Q8NFH3 340 349 NUP43 Nucleoporin Nup43 yes yes 2 0.0044249 106.88 By MS/MS 7 0 1 1 175490 175490 0 6204 1964 6394 15274 12412 12412 1 2754.9 0 IEIVVVGTGDR ITEDSFSLFWLLEPRIEIVVVGTGDRTERL LEPRIEIVVVGTGDRTERLQSQVLQAMRQR R I E D R T 0 1 0 1 0 0 1 2 0 2 0 0 0 0 0 0 1 0 0 3 0 0 11 0 1156.6452 Q9BU61 Q9BU61 112 122 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 3.7161E-09 210.08 By MS/MS 10 0 1 1 1468600 1468600 0 6205 2321 6395 15275 12413 12413 1 79153 0 IEIVVVGTGDRTER ITEDSFSLFWLLEPRIEIVVVGTGDRTERL RIEIVVVGTGDRTERLQSQVLQAMRQRGIA R I E E R L 0 2 0 1 0 0 2 2 0 2 0 0 0 0 0 0 2 0 0 3 0 0 14 1 1542.8366 Q9BU61 Q9BU61 112 125 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 0.00093858 174.57 By MS/MS 10 0 1 1 948890 948890 0 6206 2321 6396 15276 12414;12415 12415 2 51142 0 IEKEIQQK MAERKGTAKVDFLKKIEKEIQQKWDTERVF KVDFLKKIEKEIQQKWDTERVFEVNASNLE K I E Q K W 0 0 0 0 0 2 2 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 8 1 1014.571 Q9P2J5 Q9P2J5 16 23 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 2.2453E-05 180.87 By MS/MS 3 0 1 1 636000 636000 0 6207 2684 6397 15277 12416 12416 1 11637 0 IEKNELSR NESPFLNISALIALRIEKNELSRITPGAFR SALIALRIEKNELSRITPGAFRNLGSLRYL R I E S R I 0 1 1 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 987.53491 Q8TF66 Q8TF66 84 91 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 0.035528 133.13 By MS/MS 10 0 1 1 488460 0 488460 6208 2008 6398 15278 12417 12417 1 0 625360 IELFADVVPK FFDVSIGGQEVGRMKIELFADVVPKTAENF VGRMKIELFADVVPKTAENFRQFCTGEFRK K I E P K T 1 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 0 2 0 0 10 0 1129.6383 O43447 O43447 29 38 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.0015125 113.71 By MS/MS 9.5 0.5 1 1 2 129070 129070 0 6209 211 6399 15279;15280 12418;12419 12419 2 4831.8 0 IELFCTEYQNNK TLSTYLEDCKFDRERIELFCTEYQNNKNSL RERIELFCTEYQNNKNSLEILLGSIGRSLP R I E N K N 0 0 2 0 1 1 2 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 12 0 1557.7133 Q9UBI1 Q9UBI1 97 108 COMMD3 COMM domain-containing protein 3 yes yes 2 0.00017095 160.77 By MS/MS 9 0 1 1 315220 315220 0 6210 2698 6400 15281 12420 12420 1 6203.6 0 IELLGSYDPQK DLNRKSNQVKTCKAKIELLGSYDPQKQLII CKAKIELLGSYDPQKQLIIEDPYYGNDSDF K I E Q K Q 0 0 0 1 0 1 1 1 0 1 2 1 0 0 1 1 0 0 1 0 0 0 11 0 1261.6554 P24666 P24666 114 124 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 4.2912E-06 198.61 By MS/MS 9.5 0.5 1 1 2 2865700 2865700 0 6211 715 6401 15282;15283 12421 12421 1 147140 0 IELLIDAAR EAVCRGCVNFEGADRIELLIDAARQLKRSH FEGADRIELLIDAARQLKRSHVLPEGRSPG R I E A R Q 2 1 0 1 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5917 Q8IU81 Q8IU81 45 53 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.049483 76.17 By MS/MS 4 0.816 1 1 1 3 686740 686740 0 6212 1857 6402 15284;15285;15286 12422 12422 1 19088 0 IELYDCQQITR DASLEHLKSCHSLERIELYDCQQITRAGIK SLERIELYDCQQITRAGIKRLRTHLPNIKV R I E T R A 0 1 0 1 1 2 1 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 0 1437.6922 Q96IG2 Q96IG2 384 394 FBXL20 F-box/LRR-repeat protein 20 yes yes 2 1.6799E-06 175.49 By MS/MS 6.5 0.5 1 1 2 1483500 1483500 0 6213 2173 6403 15287;15288 12423 12423 1 18824 0 IENDVATILSR RKVEEQREQEAKHERIENDVATILSRRIAV KHERIENDVATILSRRIAVEYSDSEDDSEF R I E S R R 1 1 1 1 0 0 1 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1229.6616 Q92558 Q92558 527 537 WASF1 Wiskott-Aldrich syndrome protein family member 1 yes yes 2 0.0013517 140.14 By MS/MS 5 0 1 1 0 0 0 6214 2055 6404 15289 12424 12424 1 0 0 IEPLRHRVEEER I E E R 0 3 0 0 0 0 4 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 12 2 1561.8325 REV__Q9HCH5 yes yes 2 0.054827 89.08 By matching By MS/MS 4.88 1.62 1 1 1 1 3 1 2 6 108840000 25160000 83684000 + 6215 2987 6405 15290;15291;15292;15293;15294;15295;15296;15297 12425 12425 1 279950 87512000 IEQEFLTEALPVK PSEERVREIIINAVRIEQEFLTEALPVKLI VRIEQEFLTEALPVKLIGMNCTLMKQYIEF R I E V K L 1 0 0 0 0 1 3 0 0 1 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1515.8185 P31350 P31350 299 311 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 2 1.4131E-07 207.88 By MS/MS 7.5 0.5 1 1 2 558250 558250 0 6216 786 6406 15298;15299 12426 12426 1 8463.5 0 IEQVIVAEPGAVLLYK VGHITEGVCRPLKVRIEQVIVAEPGAVLLY EQVIVAEPGAVLLYKISNLLKFYHHTISGI R I E Y K I 2 0 0 0 0 1 2 1 0 2 2 1 0 0 1 0 0 0 1 3 0 0 16 0 1741.0026 Q9Y2V7 Q9Y2V7 361 376 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 4.9421E-05 194.98 By MS/MS 5 0 1 1 905430 905430 0 6217 2845 6407 15300 12427 12427 1 9081 0 IESDVQEPTEPEDDLDIMLGNK IFDIDEAEEGVKDLKIESDVQEPTEPEDDL PTEPEDDLDIMLGNKKKKKKNVKFPDEDEI K I E N K K 0 0 1 4 0 1 4 1 0 2 2 1 1 0 2 1 1 0 0 1 0 0 22 0 2486.137 P20042 P20042 103 124 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 6.5217E-19 252.01 By MS/MS 6 0 1 1 1926700 1926700 0 6218 668 6408 15301 12428 12428 1 13245 0 IESDVQEPTEPEDDLDIMLGNKK IFDIDEAEEGVKDLKIESDVQEPTEPEDDL TEPEDDLDIMLGNKKKKKKNVKFPDEDEIL K I E K K K 0 0 1 4 0 1 4 1 0 2 2 2 1 0 2 1 1 0 0 1 0 0 23 1 2614.232 P20042 P20042 103 125 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 5.132E-05 104.84 By MS/MS 6 0 1 1 1701500 1701500 0 6219 668 6409 15302 12429;12430 12430 2 11697 0 IESEGLLSLTTQLVK ERFKALHSKLQALGKIESEGLLSLTTQLVK IESEGLLSLTTQLVKEKLSTCEAEDIATYE K I E V K E 0 0 0 0 0 1 2 1 0 1 4 1 0 0 0 2 2 0 0 1 0 0 15 0 1629.9189 Q92552 Q92552 347 361 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 8.62E-09 225.55 By MS/MS 7 0 1 1 184140 184140 0 6220 2054 6410 15303 12431 12431 1 2890.7 0 IESILMSLPLTAR YDRGTKFGLFTPGSRIESILMSLPLTARWE SRIESILMSLPLTARWEYMHSPSENSKEAE R I E A R W 1 1 0 0 0 0 1 0 0 2 3 0 1 0 1 2 1 0 0 0 0 0 13 0 1442.8167 P36551 P36551 414 426 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 6.6288E-08 217.14 By MS/MS 7.5 0.5 1 1 2 302550 302550 0 6221 837 6411 15304;15305 12432 12432 422 1 4511.1 0 IEVIKPGDLGVDLTSK RYATLPNIMKAKKKKIEVIKPGDLGVDLTS EVIKPGDLGVDLTSKLSVISVEDPPQRTAG K I E S K L 0 0 0 2 0 0 1 2 0 2 2 2 0 0 1 1 1 0 0 2 0 0 16 1 1682.9455 P38117 P38117 206 221 ETFB Electron transfer flavoprotein subunit beta yes yes 3 0.034063 65.652 By MS/MS 8 0 1 1 492740 492740 0 6222 847 6412 15306 12433 12433 1 6220.8 0 IEVLEEELR EMLKSLEDLKLKNTKIEVLEEELRLARDAN KLKNTKIEVLEEELRLARDANSENCNKNKF K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1128.6027 P15924 P15924 1034 1042 DSP Desmoplakin yes yes 2 6.0547E-09 214.23 By MS/MS By MS/MS 3.25 2.73 2 2 2 1 1 5 3 7604800 4504100 3100700 6223 628 6413 15307;15308;15309;15310;15311;15312;15313;15314 12434;12435;12436;12437;12438 12434 5 853930 835720 IEWLESHQDADIEDFKAK SSEDKETMEKAVEEKIEWLESHQDADIEDF LESHQDADIEDFKAKKKELEEIVQPIISKL K I E A K K 2 0 0 3 0 1 3 0 1 2 1 2 0 1 0 1 0 1 0 0 0 0 18 1 2173.0328 P11021 P11021 602 619 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.00070907 111.34 By MS/MS 5 0 1 1 894260 894260 0 6224 571 6414 15315 12439 12439 1 8968.9 0 IEYQFFEDR KVDALLSAQPKGDPRIEYQFFEDRHSAIKL PKGDPRIEYQFFEDRHSAIKLRPKEGETYF R I E D R H 0 1 0 1 0 1 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 9 0 1245.5666 Q9NYU2 Q9NYU2 964 972 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 0.0043415 110.38 By MS/MS 3 0 1 1 145370 145370 0 6225 2638 6415 15316 12440 12440 1 2659.8 0 IEYVTVTPEGFR PGKFLLGYQPRGKPRIEYVTVTPEGFRYRG KPRIEYVTVTPEGFRYRGQIFPTVNGLFRW R I E F R Y 0 1 0 0 0 0 2 1 0 1 0 0 0 1 1 0 2 0 1 2 0 0 12 0 1409.7191 Q7KZ85 Q7KZ85 1484 1495 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.014562 88.134 By MS/MS 2 0 1 1 243140 243140 0 6226 1754 6416 15317 12441 12441 1 82239 0 IFAPNHVVAK LPTPKCHTPPLYRMRIFAPNHVVAKSRFWY LYRMRIFAPNHVVAKSRFWYFVSQLKKMKK R I F A K S 2 0 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 2 0 0 10 0 1094.6237 Q02543 Q02543 32 41 RPL18A 60S ribosomal protein L18a yes yes 2 0.0039739 107.9 By MS/MS 9 0 1 1 971120 971120 0 6227 1278 6417 15318 12442 12442 1 19112 0 IFDAAKAPIQWEER PGDGIGPEISAAVMKIFDAAKAPIQWEERN KIFDAAKAPIQWEERNVTAIQGPGGKWMIP K I F E R N 3 1 0 1 0 1 2 0 0 2 0 1 0 1 1 0 0 1 0 0 0 0 14 1 1672.8573 P50213 P50213 53 66 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 3 0.050016 61.657 By MS/MS 7 0 1 1 546440 546440 0 6228 971 6418 15319 12443 12443 1 8578.1 0 IFDAVGFTFPNR KAVKAGDIDAKTRRRIFDAVGFTFPNRLLT RRRIFDAVGFTFPNRLLTTKEAPDGCPDHV R I F N R L 1 1 1 1 0 0 0 1 0 1 0 0 0 3 1 0 1 0 0 1 0 0 12 0 1382.6983 Q9UBB6 Q9UBB6 76 87 NCDN Neurochondrin yes yes 2 5.1062E-05 167.12 By MS/MS 5 0 1 1 191720 191720 0 6229 2694 6419 15320 12444 12444 1 1922.9 0 IFDDVSSGVSQLASK ENVLKPAQEKVKEGKIFDDVSSGVSQLASK IFDDVSSGVSQLASKVQGVGSKGWRDVTTF K I F S K V 1 0 0 2 0 1 0 1 0 1 1 1 0 1 0 4 0 0 0 2 0 0 15 0 1551.7781 Q8N6T3 Q8N6T3 264 278 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 2 0.00054168 152.16 By MS/MS 7 0 1 1 1350100 1350100 0 6230 1930 6420 15321 12445 12445 1 21194 0 IFDEILVNAADNK GINYREVTFVPGLYKIFDEILVNAADNKQR YKIFDEILVNAADNKQRDPKMSCIRVTIDP K I F N K Q 2 0 2 2 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1460.7511 Q02880;P11388 P11388 84 96 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2-alpha no no 2 0.00016938 166.11 By MS/MS 3 0.816 1 1 1 3 572270 572270 0 6231 578;1282 6421 15322;15323;15324 12446;12447;12448 12446 3 108720 0 IFDIDEAEEGVK LNFFNQKKKKKKTKKIFDIDEAEEGVKDLK TKKIFDIDEAEEGVKDLKIESDVQEPTEPE K I F V K D 1 0 0 2 0 0 3 1 0 2 0 1 0 1 0 0 0 0 0 1 0 0 12 0 1363.6507 P20042 P20042 88 99 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.4573E-07 202.96 By MS/MS 7 0.816 1 1 1 3 22246000 22246000 0 6232 668 6422 15325;15326;15327 12449;12450 12449 2 166010 0 IFDIDEAEEGVKDLK LNFFNQKKKKKKTKKIFDIDEAEEGVKDLK IFDIDEAEEGVKDLKIESDVQEPTEPEDDL K I F L K I 1 0 0 3 0 0 3 1 0 2 1 2 0 1 0 0 0 0 0 1 0 0 15 1 1719.8567 P20042 P20042 88 102 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.6479E-23 287.29 By MS/MS 6 0 1 1 5674700 5674700 0 6233 668 6423 15328 12451 12451 1 39009 0 IFDIISK WRGHLIAWANNMGVKIFDIISKQRITNVPR WANNMGVKIFDIISKQRITNVPRDDISLRP K I F S K Q 0 0 0 1 0 0 0 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 7 0 834.48511 P49754 P49754 194 200 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 2 0.030472 104.37 By MS/MS 4 0 1 1 601090 601090 0 6234 960 6424 15329 12452 12452 1 56567 0 IFDLQDWTQEDERDKDAAK AKINFDSNSAYRQKKIFDLQDWTQEDERDK QDWTQEDERDKDAAKANLNYIGLDGNIGCL K I F A K A 2 1 0 5 0 2 2 0 0 1 1 2 0 1 0 0 1 1 0 0 0 0 19 2 2322.0764 Q9P2R7 Q9P2R7 288 306 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 3 0.01769 73.208 By MS/MS 7 0 1 1 742420 742420 0 6235 2690 6425 15330 12453 12453 1 11655 0 IFDPSPEDIAR ERFLAPYGRQDLHLRIFDPSPEDIARADNI LHLRIFDPSPEDIARADNIFTATERNRIDY R I F A R A 1 1 0 2 0 0 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 0 11 0 1258.6194 Q8N3Z3 Q8N3Z3 70 80 GTPBP8 GTP-binding protein 8 yes yes 2 0.0029099 109.44 By MS/MS 7 0.816 1 1 1 3 15625000 15625000 0 6236 1913 6426 15331;15332;15333 12454 12454 1 133700 0 IFDTYVGAQR KWLLRQMTGKCELQRIFDTYVGAQRTHRIE CELQRIFDTYVGAQRTHRIENSLTYSKNKV R I F Q R T 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 1 0 0 10 0 1168.5877 Q8IZ81 Q8IZ81 34 43 ELMOD2 ELMO domain-containing protein 2 yes yes 2 7.5662E-05 155.58 By MS/MS 8 0 1 1 945580 945580 0 6237 1891 6427 15334 12455 12455 1 11938 0 IFEGTNDILR EPGVERVLRDLRIFRIFEGTNDILRLFVAL LRIFRIFEGTNDILRLFVALQGCMDKGKEL R I F L R L 0 1 1 1 0 0 1 1 0 2 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1176.6139 P49748 P49748 460 469 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00089041 134.77 By MS/MS 5 0 1 1 708790 708790 0 6238 959 6428 15335 12456 12456 1 7108.8 0 IFEMGPVFTL NHSFMPIVLELIPLKIFEMGPVFTL_____ LIPLKIFEMGPVFTL_______________ K I F T L - 0 0 0 0 0 0 1 1 0 1 1 0 1 2 1 0 1 0 0 1 0 0 10 0 1152.5889 P00403 P00403 218 227 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 0.0078746 98.523 By MS/MS 9 0 1 1 50770 50770 0 6239 444 6429 15336 12457 12457 166 1 999.15 0 IFEPILGEGR TQYYLEQQLAKPLLRIFEPILGEGRAEAVL KPLLRIFEPILGEGRAEAVLLRGDHTRCKT R I F G R A 0 1 0 0 0 0 2 2 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1129.6132 P28340 P28340 969 978 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.032553 80.755 By MS/MS 3 0 1 1 673450 673450 0 6240 754 6430 15337 12458;12459 12459 2 12322 0 IFEQKDR EQIKQIKKDLKKYSKIFEQKDRLSQSKASK KDLKKYSKIFEQKDRLSQSKASKELVERRR K I F D R L 0 1 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 1 934.48723 P55884 P55884 730 736 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.018055 161.9 By MS/MS By matching 4.62 0.992 1 3 2 2 7 1 24588000 24522000 65694 6241 1065 6431 15338;15339;15340;15341;15342;15343;15344;15345 12460;12461 12461 2 1797100 139970 IFEYETQR HGPVVGSTRRLYEKKIFEYETQRRRLSPPS RRLYEKKIFEYETQRRRLSPPSSSAASSYS K I F Q R R 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 8 0 1084.5189 P50402 P50402 38 45 EMD Emerin yes yes 2 0.00018513 171.38 By MS/MS 7.5 0.5 1 1 2 26552000 26552000 0 6242 973 6432 15346;15347 12462;12463 12462 2 394660 0 IFEYETQRR HGPVVGSTRRLYEKKIFEYETQRRRLSPPS RLYEKKIFEYETQRRRLSPPSSSAASSYSF K I F R R R 0 2 0 0 0 1 2 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 9 1 1240.62 P50402 P50402 38 46 EMD Emerin yes yes 2 0.0089129 96.253 By MS/MS 7.5 0.5 1 1 2 3264100 3264100 0 6243 973 6433 15348;15349 12464;12465 12464 2 48437 0 IFFAGDTIPK RCVYKPMQPGPHVVKIFFAGDTIPKSPFVV PHVVKIFFAGDTIPKSPFVVQVGEACNPNA K I F P K S 1 0 0 1 0 0 0 1 0 2 0 1 0 2 1 0 1 0 0 0 0 0 10 0 1107.5964 O75369 O75369 430 439 FLNB Filamin-B yes yes 2 0.010013 94.302 By MS/MS 1.5 0.5 1 1 2 199140 199140 0 6244 315 6434 15350;15351 12466;12467 12467 2 59472 0 IFGDHPIPQYEVNPR PQEERETQVAAWLKKIFGDHPIPQYEVNPR IFGDHPIPQYEVNPRTTEILHHLSERNRVR K I F P R T 0 1 1 1 0 1 1 1 1 2 0 0 0 1 3 0 0 0 1 1 0 0 15 0 1780.8897 Q96CS2 Q96CS2 18 32 HAUS1 HAUS augmin-like complex subunit 1 yes yes 3 0.005091 100.73 By MS/MS 8 0 1 1 1019000 1019000 0 6245 2125 6435 15352 12468 12468 1 12865 0 IFGGVLESDAR LRDSMLKYPDSHQPRIFGGVLESDARSESP HQPRIFGGVLESDARSESPQPAPDWGSQRP R I F A R S 1 1 0 1 0 0 1 2 0 1 1 0 0 1 0 1 0 0 0 1 0 0 11 0 1162.5982 O00165 O00165 140 150 HAX1 HCLS1-associated protein X-1 yes yes 2 0.00080475 125.48 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 28516000 28419000 97352 6246 86 6436 15353;15354;15355;15356;15357 12469;12470;12471;12472;12473 12472 5 423900 175330 IFGINKY LSVLIPKMPQLHGVRIFGINKY________ MPQLHGVRIFGINKY_______________ R I F K Y - 0 0 1 0 0 0 0 1 0 2 0 1 0 1 0 0 0 0 1 0 0 0 7 1 853.46979 Q8N138;Q9P0S3 Q9P0S3 147 153 ORMDL3;ORMDL1 ORM1-like protein 3;ORM1-like protein 1 no no 2 0.032489 137.2 By MS/MS 9.5 0.5 1 1 2 2336100 2336100 0 6247 1900;2669 6437 15358;15359 12474 12474 1 118550 0 IFGTDSQYNAYNEK NFIGNYASTFTWWDRIFGTDSQYNAYNEKR RIFGTDSQYNAYNEKRKKFEKKTE______ R I F E K R 1 0 2 1 0 1 1 1 0 1 0 1 0 1 0 1 1 0 2 0 0 0 14 0 1648.7369 Q15800 Q15800 271 284 MSMO1 Methylsterol monooxygenase 1 yes yes 2 7.0457E-44 331.54 By MS/MS 4.5 3.5 1 1 2 2011800 2011800 0 6248 1534 6438 15360;15361 12475;12476 12476 2 62121 0 IFGVTTLDIVR TAEVFKKHGVYNPNKIFGVTTLDIVRANTF NPNKIFGVTTLDIVRANTFVAELKGLDPAR K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 P40926 P40926 166 176 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.00013648 148.69 By MS/MS 7.5 0.5 1 1 2 687960 687960 0 6249 862 6439 15362;15363 12477;12478 12478 2 9175.6 0 IFHELTQTDK ITAANNLVAAAIDARIFHELTQTDKALFNR AIDARIFHELTQTDKALFNRLVPSVNGVRR R I F D K A 0 0 0 1 0 1 1 0 1 1 1 1 0 1 0 0 2 0 0 0 0 0 10 0 1230.6245 P11586 P11586 464 473 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 2.9025E-06 179.1 By MS/MS 4.75 0.829 2 1 1 4 12509000 12509000 0 6250 582 6440 15364;15365;15366;15367 12479;12480 12480 2 1065600 0 IFHTVTTTDDPVIR RITTRSEKPLRSIKRIFHTVTTTDDPVIRK RIFHTVTTTDDPVIRKLAKTQGNVFATDAI R I F I R K 0 1 0 2 0 0 0 0 1 2 0 0 0 1 1 0 4 0 0 2 0 0 14 0 1613.8413 O15371 O15371 223 236 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 1.1674E-16 277.1 By MS/MS By MS/MS 4.62 2.02 1 2 1 1 3 3 1 1 12 1 176870000 176790000 75520 6251 185 6441 15368;15369;15370;15371;15372;15373;15374;15375;15376;15377;15378;15379;15380 12481;12482;12483;12484;12485;12486;12487;12488 12486 8 2038300 77387 IFHTVTTTDDPVIRK RITTRSEKPLRSIKRIFHTVTTTDDPVIRK IFHTVTTTDDPVIRKLAKTQGNVFATDAIL R I F R K L 0 1 0 2 0 0 0 0 1 2 0 1 0 1 1 0 4 0 0 2 0 0 15 1 1741.9363 O15371 O15371 223 237 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3;4 3.0384E-10 226.33 By MS/MS 5.88 0.781 3 3 2 8 64260000 64260000 0 6252 185 6442 15381;15382;15383;15384;15385;15386;15387;15388 12489;12490;12491;12492;12493;12494;12495;12496;12497 12491 9 604820 0 IFINLPR KFQGPDNGQGPKYVKIFINLPRSMDFEEAE GQGPKYVKIFINLPRSMDFEEAERSEPTQA K I F P R S 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 7 0 871.52797 O43396 O43396 196 202 TXNL1 Thioredoxin-like protein 1 yes yes 2 0.02338 109.7 By MS/MS 8 0.816 1 1 1 3 695510 695510 0 6253 207 6443 15389;15390;15391 12498 12498 1 9921.7 0 IFLITLDNSDPSLK QEICEQLNINHMIQRIFLITLDNSDPSLKS RIFLITLDNSDPSLKSGNGIPSRCVYLEEM R I F L K S 0 0 1 2 0 0 0 0 0 2 3 1 0 1 1 2 1 0 0 0 0 0 14 0 1574.8556 Q14139 Q14139 91 104 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 2.4826E-17 268.14 By MS/MS 4 0.816 1 1 1 3 350680 350680 0 6254 1421 6444 15392;15393;15394 12499;12500 12499 2 20565 0 IFLLECNVR LVEYFISSEGRELIKIFLLECNVREVRVAV GRELIKIFLLECNVREVRVAVATILEKTLD K I F V R E 0 1 1 0 1 0 1 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1162.6169 Q9UPU5 Q9UPU5 2224 2232 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.021746 88.177 By MS/MS 2 0 1 1 227080 227080 0 6255 2802 6445 15395 12501 12501 1 76806 0 IFLLVQSR FCIAVVYITYHNKRKIFLLVQSRKWRDGLC TYHNKRKIFLLVQSRKWRDGLCSKTVEYHR K I F S R K 0 1 0 0 0 1 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 8 0 974.5913 Q8NC54 Q8NC54 223 230 KCT2 Keratinocyte-associated transmembrane protein 2 yes yes 2 0.012059 108.46 By MS/MS 9.5 0.5 1 1 2 167640 167640 0 6256 1947 6446 15396;15397 12502 12502 1 7977.3 0 IFLYPNAGQLK HAESPDDLVREAAYKIFLYPNAGQLKCLEE AAYKIFLYPNAGQLKCLEELLSSRDLLAKL K I F L K C 1 0 1 0 0 1 0 1 0 1 2 1 0 1 1 0 0 0 1 0 0 0 11 0 1262.7023 Q99797 Q99797 270 280 MIPEP Mitochondrial intermediate peptidase yes yes 2 0.0010569 115.49 By MS/MS 5 0 1 1 648090 648090 0 6257 2267 6447 15398 12503 12503 1 6500 0 IFNETPINPR PFQHLEKSAVLQEARIFNETPINPRRCLHI LQEARIFNETPINPRRCLHILTKILYLLNQ R I F P R R 0 1 2 0 0 0 1 0 0 2 0 0 0 1 2 0 1 0 0 0 0 0 10 0 1199.6299 Q9UBF2 Q9UBF2 33 42 COPG2 Coatomer subunit gamma-2 yes yes 2 2.4882E-06 179.37 By MS/MS 4 0.816 1 1 1 3 10136000 10136000 0 6258 2697 6448 15399;15400;15401 12504;12505;12506 12505 3 830460 0 IFNLSGGEK GIMFSVRPPKKSWKKIFNLSGGEKTLSSLA KKSWKKIFNLSGGEKTLSSLALVFALHHYK K I F E K T 0 0 1 0 0 0 1 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 9 0 963.50255 Q9NTJ3 Q9NTJ3 1188 1196 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0058724 107.69 By MS/MS 2.5 0.5 1 1 2 1294000 1294000 0 6259 2575 6449 15402;15403 12507 12507 1 41732 0 IFQAENAK PMKDMFKLLMFPESRIFQAENAKIKREWLE LMFPESRIFQAENAKIKREWLEVLEDTKRA R I F A K I 2 0 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 919.47633 Q8IYI6 Q8IYI6 261 268 EXOC8 Exocyst complex component 8 yes yes 2 0.025598 93.429 By MS/MS 5 0 1 1 1403500 1403500 0 6260 1887 6450 15404 12508 12508 1 14076 0 IFQFQNFTNTR SPWDPKENLPQDYARIFQFQNFTNTRKSIF DYARIFQFQNFTNTRKSIFKEVEEKEVEGA R I F T R K 0 1 2 0 0 2 0 0 0 1 0 0 0 3 0 0 2 0 0 0 0 0 11 0 1414.6993 Q2NL82 Q2NL82 527 537 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 2.387E-09 215.72 By MS/MS 4 0 1 1 939260 939260 0 6261 1570 6451 15405 12509 12509 1 88391 0 IFQGNVHNFEK VWDVRPFAPKERCVKIFQGNVHNFEKNLLR RCVKIFQGNVHNFEKNLLRCSWSPDGSKIA K I F E K N 0 0 2 0 0 1 1 1 1 1 0 1 0 2 0 0 0 0 0 1 0 0 11 0 1331.6622 Q96DI7 Q96DI7 276 286 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 2 3.3092E-05 157.75 By MS/MS 7 0 1 1 1396900 1396900 0 6262 2135 6452 15406 12510 12510 1 21929 0 IFQKGESPVDYDGGR VLASRYGIRGFPTIKIFQKGESPVDYDGGR IFQKGESPVDYDGGRTRSDIVSRALDLFSD K I F G R T 0 1 0 2 0 1 1 3 0 1 0 1 0 1 1 1 0 0 1 1 0 0 15 1 1666.7951 Q15084 Q15084 242 256 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0043012 125.84 By MS/MS 6 0 1 1 1508400 1508400 0 6263 1488 6453 15407 12511 12511 1 10369 0 IFQNAPTDPTQDFSTQVAK SIPDFQRKYVDKLEKIFQNAPTDPTQDFST APTDPTQDFSTQVAKLGHGLLSGEYSKPVP K I F A K L 2 0 1 2 0 3 0 0 0 1 0 1 0 2 2 1 3 0 0 1 0 0 19 0 2107.0222 P45974 P45974 361 379 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 1.3198E-17 257.81 By MS/MS 4 0 1 1 1734100 1734100 0 6264 906 6454 15408 12512 12512 1 163190 0 IFQNLCDITR ETGHVSGPDGQNPEKIFQNLCDITRVLLWR QNPEKIFQNLCDITRVLLWRYTSIPTSVEE K I F T R V 0 1 1 1 1 1 0 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1278.6391 Q9NVI1 Q9NVI1 870 879 FANCI Fanconi anemia group I protein yes yes 2 0.00019118 147.73 By MS/MS 3 0 1 1 132190 132190 0 6265 2597 6455 15409 12513 12513 1 2418.6 0 IFRDEGGKAFFK GADIMYTGTVDCWRKIFRDEGGKAFFKGAW WRKIFRDEGGKAFFKGAWSNVLRGMGGAFV K I F F K G 1 1 0 1 0 0 1 2 0 1 0 2 0 3 0 0 0 0 0 0 0 0 12 2 1413.7405 P12236 P12236 261 272 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 3 0.0013187 115 By MS/MS 8 0 1 1 3554700 3554700 0 6266 589 6456 15410 12514 12514 1 44878 0 IFSLSGTLETVR NLDSDVVQLRERHWRIFSLSGTLETVRGRG HWRIFSLSGTLETVRGRGVVGREPVLSKEQ R I F V R G 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 2 2 0 0 1 0 0 12 0 1321.7242 Q9Y2S7 Q9Y2S7 286 297 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 2.3837E-05 175.65 By MS/MS 7 0 1 1 177060 177060 0 6267 2842 6457 15411 12515 12515 1 2779.5 0 IFTELCETFLEK AVAREDLDKVLNYCRIFTELCETFLEKIVC YCRIFTELCETFLEKIVCTPGQGLGDLRTL R I F E K I 0 0 0 0 1 0 3 0 0 1 2 1 0 2 0 0 2 0 0 0 0 0 12 0 1528.7483 Q9Y5L0 Q9Y5L0 298 309 TNPO3 Transportin-3 yes yes 2 5.8783E-10 225.22 By MS/MS 4 0 1 1 147930 147930 0 6268 2915 6458 15412 12516;12517 12516 2 13921 0 IFTIESTR WARKVQQRNLGVSGRIFTIESTRVRGRTGN NLGVSGRIFTIESTRVRGRTGNVLKLKVNF R I F T R V 0 1 0 0 0 0 1 0 0 2 0 0 0 1 0 1 2 0 0 0 0 0 8 0 965.5182 Q14204 Q14204 717 724 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00031199 164.72 By MS/MS By matching 2.17 1.07 2 2 1 1 4 2 8615000 8489600 125430 6269 1433 6459 15413;15414;15415;15416;15417;15418 12518;12519;12520 12519 3 2008000 146430 IFTSIGEDYDER TLRILFRPVASQLPRIFTSIGEDYDERVLP LPRIFTSIGEDYDERVLPSITTEILKSVVA R I F E R V 0 1 0 2 0 0 2 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1443.6518 P35232 P35232 106 117 PHB Prohibitin yes yes 2 2.2894E-17 215.72 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 107130000 106040000 1082200 6270 814 6460 15419;15420;15421;15422 12521;12522;12523;12524;12525;12526 12526 6 1345100 1460300 IFVFEPPPGVK EINPKVPVNLLRAGRIFVFEPPPGVKANML RAGRIFVFEPPPGVKANMLRTFSSIPVSRI R I F V K A 0 0 0 0 0 0 1 1 0 1 0 1 0 2 3 0 0 0 0 2 0 0 11 0 1228.6856 Q14204 Q14204 4144 4154 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.5472E-05 158.76 By MS/MS 3 1.41 1 1 1 1 1 5 4236200 4236200 0 6271 1433 6461 15423;15424;15425;15426;15427 12527;12528;12529;12530;12531 12529 5 838760 0 IFVGGLSPDTPEEK PKRAKAMKTKEPVKKIFVGGLSPDTPEEKI KIFVGGLSPDTPEEKIREYFGGFGEVESIE K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 Q14103 Q14103 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 2.153E-07 220.82 By MS/MS By matching 7.75 0.829 2 1 1 3 1 23623000 23586000 36240 6272 1419 6462 15428;15429;15430;15431 12532;12533;12534 12532 3 370830 65267 IFVGNVSAACTSQELR LVVEMSRPRPLNTWKIFVGNVSAACTSQEL FVGNVSAACTSQELRSLFERRGRVIECDVV K I F L R S 2 1 1 0 1 1 1 1 0 1 1 0 0 1 0 2 1 0 0 2 0 0 16 0 1750.8672 Q96PK6 Q96PK6 81 96 RBM14 RNA-binding protein 14 yes yes 2 2.8297E-44 333.44 By MS/MS 5 0 1 1 1486800 1486800 0 6273 2210 6463 15432 12535 12535 1 14912 0 IGAEVYHNLK MILPVGAANFREAMRIGAEVYHNLKNVIKE REAMRIGAEVYHNLKNVIKEKYGKDATNVG R I G L K N 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1142.6084 P06733 P06733 184 193 ENO1 Alpha-enolase yes yes 3 0.048886 68.846 By MS/MS 6.5 0.5 1 1 2 3205400 3205400 0 6274 500 6464 15433;15434 12536 12536 1 23995 0 IGAFGYMECSAK QEPVKPEEGRDMANRIGAFGYMECSAKTKD ANRIGAFGYMECSAKTKDGVREVFEMATRA R I G A K T 2 0 0 0 1 0 1 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 12 0 1332.5842 P61586 P61586 151 162 RHOA Transforming protein RhoA yes yes 2 0.0010649 123.96 By MS/MS 9 0 2 2 5725900 5725900 0 6275 1125 6465;6466 15435;15436 12537;12538 12538 639 2 112690 0 IGAHSHIR TTKVPEIRDVTRIERIGAHSHIRGLGLDDA DVTRIERIGAHSHIRGLGLDDALEPRQASQ R I G I R G 1 1 0 0 0 0 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 889.48823 Q9Y230 Q9Y230 22 29 RUVBL2 RuvB-like 2 yes yes 2 0.003205 133.81 By MS/MS By matching 6 0 2 1 1 5244200 5232000 12182 6276 2810 6467 15437;15438 12539 12539 1 35966 12483 IGALQGAVDR GIESLEGVLQMMQTRIGALQGAVDRIKAKI MMQTRIGALQGAVDRIKAKIVEPYNKIVAR R I G D R I 2 1 0 1 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 998.55089 Q9UP83 Q9UP83 138 147 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0091069 96.342 By MS/MS 4 0 1 1 2310700 2310700 0 6277 2797 6468 15439 12540 12540 1 217450 0 IGASFLQR RFVTVQTISGTGALRIGASFLQRFFKFSRD SGTGALRIGASFLQRFFKFSRDVFLPKPTW R I G Q R F 1 1 0 0 0 1 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 8 0 890.4974 P00505 P00505 140 147 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 0.018237 101.6 By MS/MS 7 0 1 1 2958500 2958500 0 6278 446 6469 15440 12541 12541 1 46443 0 IGASTLLSDIER KEELGDEWLKPELFRIGASTLLSDIERQIY LFRIGASTLLSDIERQIYHHVTGRYAAYHD R I G E R Q 1 1 0 1 0 0 1 1 0 2 2 0 0 0 0 2 1 0 0 0 0 0 12 0 1273.6878 Q9Y315 Q9Y315 288 299 DERA Deoxyribose-phosphate aldolase yes yes 2 7.8859E-05 158.41 By MS/MS 7.5 0.5 1 1 2 1234800 1234800 0 6279 2855 6470 15441;15442 12542;12543 12543 2 16813 0 IGAVNCGDDR PTWRDFAKEVDGLLRIGAVNCGDDRMLCRM DGLLRIGAVNCGDDRMLCRMKGVNSYPSLF R I G D R M 1 1 1 2 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 10 0 1075.4717 Q8IXB1 Q8IXB1 181 190 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.0042805 107.21 By MS/MS 4.5 0.5 1 1 2 1906000 1906000 0 6280 1874 6471 15443;15444 12544 12544 1 76011 0 IGDEDVGR KKGPKVTVKVYFDLRIGDEDVGRVIFGLFG KVYFDLRIGDEDVGRVIFGLFGKTVPKTVD R I G G R V 0 1 0 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 859.40356 P23284 P23284 52 59 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.00036581 161.9 By MS/MS 9 0 1 1 1881200 1881200 0 6281 702 6472 15445 12545 12545 1 37022 0 IGDETAR ALEAQYKYIVIEPTRIGDETARWITVGNCL YIVIEPTRIGDETARWITVGNCLHKTAVLA R I G A R W 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 7 0 760.37153 P17152 P17152 67 73 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.026183 107.59 By MS/MS 9.5 0.5 1 1 2 1963900 1963900 0 6282 640 6473 15446;15447 12546 12546 1 41867 0 IGDEYFTFITDCKDPK EDDVGTGAGLLEIKKIGDEYFTFITDCKDP GDEYFTFITDCKDPKACTILLRGASKEILS K I G P K A 0 0 0 3 1 0 1 1 0 2 0 2 0 2 1 0 2 0 1 0 0 0 16 1 1947.8924 P49368 P49368 355 370 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00080909 126.34 By MS/MS 6.14 0.99 2 3 1 1 7 39032000 39032000 0 6283 947 6474 15448;15449;15450;15451;15452;15453;15454 12547;12548;12549;12550;12551;12552 12547 6 297050 0 IGDFGLATVK LKSNNIFLHEGLTVKIGDFGLATVKTRWSG GLTVKIGDFGLATVKTRWSGAQPLEQPSGS K I G V K T 1 0 0 1 0 0 0 2 0 1 1 1 0 1 0 0 1 0 0 1 0 0 10 0 1019.5651 P04049;P15056;P10398 P10398 445 454 RAF1;BRAF;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase B-raf;Serine/threonine-protein kinase A-Raf no no 2 0.0067422 101.66 By MS/MS 5 0 1 1 2057100 2057100 0 6284 465;559 6475 15455 12553 12553 1 20632 0 IGDFGLVTSLK LKPSNIFLVDTKQVKIGDFGLVTSLKNDGK KQVKIGDFGLVTSLKNDGKRTRSKGTLRYM K I G L K N 0 0 0 1 0 0 0 2 0 1 2 1 0 1 0 1 1 0 0 1 0 0 11 0 1148.6441 P19525 P19525 430 440 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 2 0.0012433 118.03 By MS/MS 5 0 1 1 660920 660920 0 6285 663 6476 15456 12554 12554 1 6628.7 0 IGDFIDVSEGPLIPR EKASQNPERIVKLHRIGDFIDVSEGPLIPR IGDFIDVSEGPLIPRTSICFQYEVSAVHNL R I G P R T 0 1 0 2 0 0 1 2 0 3 1 0 0 1 2 1 0 0 0 1 0 0 15 0 1626.8617 Q9NYK5 Q9NYK5 257 271 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.0010142 143 By MS/MS 7.5 0.5 1 1 2 2077800 2077800 0 6286 2635 6477 15457;15458 12555;12556 12556 2 28592 0 IGDIIKSEK LQQVINVDLIHIENRIGDIIKSEKHVQLVL IHIENRIGDIIKSEKHVQLVLGQLIDENYL R I G E K H 0 0 0 1 0 0 1 1 0 3 0 2 0 0 0 1 0 0 0 0 0 0 9 1 1001.5757 O94874 O94874 97 105 UFL1 E3 UFM1-protein ligase 1 yes yes 2;3 0.0042801 135.71 By MS/MS 4.33 0.471 2 1 3 2400500 2400500 0 6287 372 6478 15459;15460;15461 12557;12558 12557 2 213820 0 IGDKEGALTAFR EIRDAMMAKAEYLCRIGDKEGALTAFRKTY LCRIGDKEGALTAFRKTYDKTVALGHRLDI R I G F R K 2 1 0 1 0 0 1 2 0 1 1 1 0 1 0 0 1 0 0 0 0 0 12 1 1276.6776 Q15008 Q15008 114 125 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2;3 0.0012771 134.38 By MS/MS 6.67 0.471 1 2 3 5988000 5988000 0 6288 1471 6479 15462;15463;15464 12559;12560 12560 2 90636 0 IGDKEGALTAFRK EIRDAMMAKAEYLCRIGDKEGALTAFRKTY CRIGDKEGALTAFRKTYDKTVALGHRLDIV R I G R K T 2 1 0 1 0 0 1 2 0 1 1 2 0 1 0 0 1 0 0 0 0 0 13 2 1404.7725 Q15008 Q15008 114 126 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2;3 0.018105 104.59 By MS/MS 7 0 2 2 5929800 5929800 0 6289 1471 6480 15465;15466 12561;12562 12561 2 93087 0 IGDLACANIQHLSSR FFKSSTNLSEFVMRKIGDLACANIQHLSSR IGDLACANIQHLSSRSLVNIVKMFRFTHVD K I G S R S 2 1 1 1 1 1 0 1 1 2 2 0 0 0 0 2 0 0 0 0 0 0 15 0 1653.8257 Q7L8L6 Q7L8L6 340 354 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2;3 0.00072011 120.53 By MS/MS 5 0 2 2 5121900 5121900 0 6290 1771 6481 15467;15468 12563;12564 12564 2 51370 0 IGDLGLATLK KCDNIFITGPTGSVKIGDLGLATLKRASFA TGSVKIGDLGLATLKRASFAKSVIGTPEFM K I G L K R 1 0 0 1 0 0 0 2 0 1 3 1 0 0 0 0 1 0 0 0 0 0 10 0 999.59645 Q9H4A3;Q96J92;Q9Y3S1 Q9H4A3 366 375 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 yes no 2 0.0018344 112.71 By MS/MS 1 0 1 1 168530 168530 0 6291 2443 6482 15469 12565 12565 1 40611 0 IGDLQAFQGHGAGNLAGLK ELPAQKWWHTGALYRIGDLQAFQGHGAGNL QAFQGHGAGNLAGLKGRLDYLSSLKVKGLV R I G L K G 3 0 1 1 0 2 0 5 1 1 3 1 0 1 0 0 0 0 0 0 0 0 19 0 1865.9748 P08195 P08195 227 245 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2;3 3.5681E-05 199.38 By MS/MS 4.67 0.471 1 2 3 9743200 9743200 0 6292 519 6483 15470;15471;15472 12566;12567;12568 12568 3 228220 0 IGEEQSAEDAEDGPPELLFIHGGHTAK SSGTDRRLNVWDLSKIGEEQSAEDAEDGPP GPPELLFIHGGHTAKISDFSWNPNEPWVIC K I G A K I 3 0 0 2 0 1 5 4 2 2 2 1 0 1 2 1 1 0 0 0 0 0 27 0 2846.3359 Q16576 Q16576 349 375 RBBP7 Histone-binding protein RBBP7 yes yes 3;4 2.182E-10 131.26 By MS/MS 6 0 2 2 6110000 6110000 0 6293 1553 6484 15473;15474 12569;12570;12571 12569 3 42001 0 IGEEQSPEDAEDGPPELLFIHGGHTAK SSGTDRRLNVWDLSKIGEEQSPEDAEDGPP GPPELLFIHGGHTAKISDFSWNPNEPWVIC K I G A K I 2 0 0 2 0 1 5 4 2 2 2 1 0 1 3 1 1 0 0 0 0 0 27 0 2872.3515 Q09028 Q09028 350 376 RBBP4 Histone-binding protein RBBP4 yes yes 3;4 1.4227E-12 155.25 By MS/MS 6 0 2 2 18403000 18403000 0 6294 1318 6485 15475;15476 12572;12573 12573 2 126500 0 IGEGTYGTVFK ______________________________ KLEKIGEGTYGTVFKAKNRETHEIVALKRV K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.00093219 122.94 By MS/MS 8 0 1 1 1858000 1858000 0 6295 1261 6486 15477 12574 12574 1 23458 0 IGEGTYGVVYK ______________________________ KIEKIGEGTYGVVYKGRHKTTGQVVAMKKI K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 P06493;P24941;Q00526 P06493 10 20 CDK1;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 3.3888E-06 179.37 By MS/MS 8 0 1 1 7406300 7406300 0 6296 496;718 6487 15478 12575 12575 1 93504 0 IGEKYVDMSVK EAKTDPSILGGMIVRIGEKYVDMSVKTKIQ MIVRIGEKYVDMSVKTKIQKLGRAMREIV_ R I G V K T 0 0 0 1 0 0 1 1 0 1 0 2 1 0 0 1 0 0 1 2 0 0 11 1 1267.6482 P48047 P48047 189 199 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 0.0012028 139.32 By MS/MS 9 0 1 1 1755000 1755000 0 6297 932 6488 15479 12576 12576 1 34538 0 IGELFALR AGKKVKLSHEEVMQKIGELFALRHRINLSS HEEVMQKIGELFALRHRINLSSDFLITPDF K I G L R H 1 1 0 0 0 0 1 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 917.53345 Q9NWS8 Q9NWS8 353 360 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 0.012059 108.46 By MS/MS 7.5 0.5 1 1 2 598370 598370 0 6298 2611 6489 15480;15481 12577;12578 12578 2 8502.3 0 IGELFSK LLQTFRSSRLMDEFKIGELFSKFYGELALK SRLMDEFKIGELFSKFYGELALKKKIPDTV K I G S K F 0 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 7 0 792.43815 P78527 P78527 149 155 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0534 89.142 By MS/MS 1.5 0.5 1 1 2 743920 743920 0 6299 1225 6490 15482;15483 12579 12579 1 224150 0 IGEYLEK YIQCIAAISRQAGHRIGEYLEKIIPLVVKF ISRQAGHRIGEYLEKIIPLVVKFCNVDDDE R I G E K I 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 7 0 850.44363 Q86VP6 Q86VP6 249 255 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.034566 101.28 By MS/MS 3.5 0.5 1 1 2 1211600 1211600 0 6300 1831 6491 15484;15485 12580 12580 1 46928 0 IGFDVVTLSGTR VDGFYTEEVRQGGRRIGFDVVTLSGTRGPL GRRIGFDVVTLSGTRGPLSRVGLEPPPGKR R I G T R G 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 1 2 0 0 2 0 0 12 0 1263.6823 Q9BSD7 Q9BSD7 48 59 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 4.2063E-05 169.93 By MS/MS 9 0 1 1 1096200 1096200 0 6301 2304 6492 15486 12581 12581 1 21574 0 IGFFQGDIR FERVVECVMLCHGAKIGFFQGDIRLLMDDL LCHGAKIGFFQGDIRLLMDDLKVLQPTVFP K I G I R L 0 1 0 1 0 1 0 2 0 2 0 0 0 2 0 0 0 0 0 0 0 0 9 0 1051.5451 P33121 P33121 341 349 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.0022754 117.81 By MS/MS 5 0 1 1 1088700 1088700 0 6302 799 6493 15487 12582 12582 1 10919 0 IGFPWSEIR LGLNIYEKDDKLTPKIGFPWSEIRNISFND DKLTPKIGFPWSEIRNISFNDKKFVIKPID K I G I R N 0 1 0 0 0 0 1 1 0 2 0 0 0 1 1 1 0 1 0 0 0 0 9 0 1103.5764 P15311 P15311 238 246 EZR Ezrin no no 2 0.0095404 101.25 By MS/MS 5 0 1 1 491950 491950 0 6303 624 6494 15488 12583 12583 1 4934 0 IGFSAADAVTGLK MPAVLTFCLLILTAKIGFSAADAVTGLKLV AKIGFSAADAVTGLKLVEEGVPKEHLALLA K I G L K L 3 0 0 1 0 0 0 2 0 1 1 1 0 1 0 1 1 0 0 1 0 0 13 0 1248.6714 O00400 O00400 322 334 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 0.015088 89.266 By MS/MS 2 0.816 1 1 1 3 239110 239110 0 6304 102 6495 15489;15490;15491 12584 12584 0 49545 0 IGFVGFPSVGK GPGEGFDVAKTGDARIGFVGFPSVGKSTLL GDARIGFVGFPSVGKSTLLSNLAGVYSEVA R I G G K S 0 0 0 0 0 0 0 3 0 1 0 1 0 2 1 1 0 0 0 2 0 0 11 0 1106.6124 Q9Y295 Q9Y295 67 77 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 0.00064813 128.6 By MS/MS 7 0 1 1 1968800 1968800 0 6305 2822 6496 15492 12585 12585 1 30907 0 IGGAQNR SSEPCALCSLHSIGKIGGAQNRSYSKLLCG CSLHSIGKIGGAQNRSYSKLLCGLLAERLR K I G N R S 1 1 1 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 7 0 714.37729 P14174 P14174 68 74 MIF Macrophage migration inhibitory factor yes yes 2 0.0011539 175.34 By MS/MS 10 0 1 1 2736500 2736500 0 6306 611 6497 15493 12586 12586 1 147490 0 IGGGIDVPVPR RDQGGFGDRNEYGSRIGGGIDVPVPRHSVG YGSRIGGGIDVPVPRHSVGVVIGRSGEMIK R I G P R H 0 1 0 1 0 0 0 3 0 2 0 0 0 0 2 0 0 0 0 2 0 0 11 0 1078.6135 Q92945 Q92945 321 331 KHSRP Far upstream element-binding protein 2 yes yes 2 0.0097883 91.265 By MS/MS 4.5 0.5 1 1 2 1022300 1022300 0 6307 2080 6498 15494;15495 12587 12587 1 42857 0 IGGIFAFK IEKKLEEEGEQFVKKIGGIFAFKVKDGPGG GEQFVKKIGGIFAFKVKDGPGGKEATWVVD K I G F K V 1 0 0 0 0 0 0 2 0 2 0 1 0 2 0 0 0 0 0 0 0 0 8 0 851.49052 P22307 P22307 455 462 SCP2 Non-specific lipid-transfer protein yes yes 2 0.026261 92.692 By MS/MS 10 0 1 1 134750 134750 0 6308 690 6499 15496 12588 12588 1 7262.4 0 IGGIGTVPVGR PTDKPLRLPLQDVYKIGGIGTVPVGRVETG DVYKIGGIGTVPVGRVETGVLKPGMVVTFA K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;Q05639 Q5VTE0 256 266 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 4.2547E-05 156.92 By MS/MS By MS/MS 5.9 2.84 1 1 1 2 2 1 1 1 8 2 82596000 82116000 479760 6309 1209 6500 15497;15498;15499;15500;15501;15502;15503;15504;15505;15506 12589;12590;12591;12592;12593;12594;12595;12596;12597 12593 9 2526300 783450 IGGVQQDTILAEGLHFR VFTVEGGHRAIFFNRIGGVQQDTILAEGLH GVQQDTILAEGLHFRIPWFQYPIIYDIRAR R I G F R I 1 1 0 1 0 2 1 3 1 2 2 0 0 1 0 0 1 0 0 1 0 0 17 0 1852.9795 Q99623 Q99623 55 71 PHB2 Prohibitin-2 yes yes 2;3 1.1466E-11 245.5 By MS/MS 7.71 0.7 3 3 1 7 16738000 16738000 0 6310 2254 6501 15507;15508;15509;15510;15511;15512;15513 12598;12599;12600;12601;12602;12603 12599 6 238800 0 IGIEIIK IPALDSLTPANEDQKIGIEIIKRTLKIPAM TPANEDQKIGIEIIKRTLKIPAMTIAKNAG K I G I K R 0 0 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 7 0 784.50584 P10809 P10809 463 469 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.015433 121.29 By MS/MS 7.5 1.12 1 1 1 1 4 8013500 8013500 0 6311 569 6502 15514;15515;15516;15517 12604 12604 1 59521 0 IGIEIIKR IPALDSLTPANEDQKIGIEIIKRTLKIPAM PANEDQKIGIEIIKRTLKIPAMTIAKNAGV K I G K R T 0 1 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 8 1 940.60695 P10809 P10809 463 470 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.0012284 152.47 By MS/MS By matching 7 1.54 2 3 2 2 1 1 10 1 42872000 42780000 91836 6312 569 6503 15518;15519;15520;15521;15522;15523;15524;15525;15526;15527;15528 12605;12606;12607;12608 12607 4 331440 94106 IGIFGQDEDVTSK ITGDNKGTAVAICRRIGIFGQDEDVTSKAF RRIGIFGQDEDVTSKAFTGREFDELNPSAQ R I G S K A 0 0 0 2 0 1 1 2 0 2 0 1 0 1 0 1 1 0 0 1 0 0 13 0 1407.6882 P16615 P16615 638 650 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.4244E-08 210.95 By MS/MS By MS/MS 3.57 2.69 3 3 3 2 1 1 1 10 4 38637000 38100000 536960 6313 635 6504 15529;15530;15531;15532;15533;15534;15535;15536;15537;15538;15539;15540;15541;15542 12609;12610;12611;12612;12613;12614;12615;12616;12617;12618;12619;12620;12621;12622;12623;12624;12625 12619 17 5822000 678850 IGIGELITR VLRSPARHQLDHVFKIGIGELITRSAKHIF LDHVFKIGIGELITRSAKHIFKTYLQGVEL K I G T R S 0 1 0 0 0 0 1 2 0 3 1 0 0 0 0 0 1 0 0 0 0 0 9 0 970.58113 O75153 O75153 811 819 CLUH Clustered mitochondria protein homolog yes yes 2 0.0024417 115.7 By MS/MS 3 0 1 1 135530 135530 0 6314 300 6505 15543 12626 12626 1 2479.7 0 IGIIDGEYVVNPTR SLSDIPWNGPVGAVRIGIIDGEYVVNPTRK RIGIIDGEYVVNPTRKEMSSSTLNLVVAGA R I G T R K 0 1 1 1 0 0 1 2 0 3 0 0 0 0 1 0 1 0 1 2 0 0 14 0 1544.8199 Q8TCS8 Q8TCS8 193 206 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.00040685 136.01 By MS/MS 5 0 1 1 975060 975060 0 6315 1992 6506 15544 12627 12627 1 9779.4 0 IGIIGGTGLDDPEILEGR ______________________________ IGGTGLDDPEILEGRTEKYVDTPFGKPSDA K I G G R T 0 1 0 2 0 0 2 5 0 4 2 0 0 0 1 0 1 0 0 0 0 0 18 0 1823.9629 Q13126 Q13126 12 29 MTAP S-methyl-5-thioadenosine phosphorylase yes yes 2 0.00031191 192.4 By MS/MS 8 0 1 1 136530 136530 0 6316 1355 6507 15545 12628 12628 1 1723.7 0 IGILHENFQTLK KDAVFIPAGWDNDKKIGILHENFQTLKAED DKKIGILHENFQTLKAEDNFEDIITKPPVR K I G L K A 0 0 1 0 0 1 1 1 1 2 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1411.7823 Q9Y6G9 Q9Y6G9 333 344 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2;3 7.2099E-05 128.81 By MS/MS 6 0 2 2 5653800 5653800 0 6317 2943 6508 15546;15547 12629;12630 12630 2 38866 0 IGITNHDEYSLVR DSKTVTDMLMTICARIGITNHDEYSLVREL ARIGITNHDEYSLVRELMEEKKEEITGTLR R I G V R E 0 1 1 1 0 0 1 1 1 2 1 0 0 0 0 1 1 0 1 1 0 0 13 0 1515.7682 Q9Y490 Q9Y490 119 131 TLN1 Talin-1 yes yes 3 0.0053019 100.02 By MS/MS 2.5 0.5 1 1 2 1040900 1040900 0 6318 2888 6509 15548;15549 12631 12631 1 334880 0 IGIVGLPNVGK IKPPPIIGRFGTSLKIGIVGLPNVGKSTFF TSLKIGIVGLPNVGKSTFFNVLTNSQASAE K I G G K S 0 0 1 0 0 0 0 3 0 2 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1065.6546 Q9NTK5 Q9NTK5 25 35 OLA1 Obg-like ATPase 1 yes yes 2 0.00056693 130.22 By MS/MS 7 0 1 1 1413200 1413200 0 6319 2577 6510 15550 12632 12632 1 22185 0 IGKPHTVPCK KLSIVPVRRGYWGNKIGKPHTVPCKVTGRC YWGNKIGKPHTVPCKVTGRCGSVLVRLIPA K I G C K V 0 0 0 0 1 0 0 1 1 1 0 2 0 0 2 0 1 0 0 1 0 0 10 1 1135.6172 P15880 P15880 174 183 RPS2 40S ribosomal protein S2 yes yes 2;3 0.0054818 121.5 By MS/MS 8.25 0.433 3 1 4 17835000 17835000 0 6320 627 6511 15551;15552;15553;15554 12633;12634;12635;12636 12634 4 228600 0 IGLDFCK VATPGRLVDMMERGKIGLDFCKYLVLDEAD VDMMERGKIGLDFCKYLVLDEADRMLDMGF K I G C K Y 0 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 0 851.42112 O00571;O15523 O00571 336 342 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.043896 94.262 By MS/MS By matching 5.75 0.829 2 1 1 3 1 17510000 17427000 82651 6321 116 6512 15555;15556;15557;15558 12637 12637 1 176490 69409 IGLENFLLR LSADNMDPDFVERRRIGLENFLLRIASHPI FVERRRIGLENFLLRIASHPILCRDKIFYL R I G L R I 0 1 1 0 0 0 1 1 0 1 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1073.6233 O95219 O95219 156 164 SNX4 Sorting nexin-4 yes yes 2 0.011061 98.582 By MS/MS 6 0 1 1 293640 293640 0 6322 396 6513 15559 12638 12638 1 2018.5 0 IGLETSLR EDVEMSEDAYTVLTRIGLETSLRYAIQLIT AYTVLTRIGLETSLRYAIQLITAASLVCRK R I G L R Y 0 1 0 0 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 0 0 0 8 0 887.50763 Q9Y230 Q9Y230 393 400 RUVBL2 RuvB-like 2 yes yes 2 0.0057163 122.18 By MS/MS By matching 6.75 0.829 2 1 1 3 1 35699000 35559000 140420 6323 2810 6514 15560;15561;15562;15563 12639 12639 1 254550 143890 IGLFGGAGVGK IKVVDLLAPYAKGGKIGLFGGAGVGKTVLI KGGKIGLFGGAGVGKTVLIMELINNVAKAH K I G G K T 1 0 0 0 0 0 0 5 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 0 974.55492 P06576 P06576 202 212 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.0035814 107.66 By MS/MS 8 1.41 1 1 1 1 1 5 98402000 98402000 0 6324 497 6515 15564;15565;15566;15567;15568 12640;12641;12642 12640 3 831500 0 IGLFYMDNDLITR VALGHRLDIVFYLLRIGLFYMDNDLITRNT LRIGLFYMDNDLITRNTEKAKSLIEEGGDW R I G T R N 0 1 1 2 0 0 0 1 0 2 2 0 1 1 0 0 1 0 1 0 0 0 13 0 1569.7861 Q15008 Q15008 147 159 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00016232 172.21 By MS/MS 6.67 0.471 1 2 3 1307800 1307800 0 6325 1471 6516;6517 15569;15570;15571 12643;12644;12645;12646;12647 12645 863 4 18514 0 IGLGGRGGSGGSYGR LEGGQEDFESSGAGKIGLGGRGGSGGSYGR IGLGGRGGSGGSYGRGSRGGSGGSYGGGGS K I G G R G 0 2 0 0 0 0 0 8 0 1 1 0 0 0 0 2 0 0 1 0 0 0 15 1 1349.68 P35527;CON__P35527 P35527 473 487 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.012989 120.03 By matching By MS/MS 5.91 3.03 1 1 1 1 1 1 1 1 1 2 1 10 6914700 290210 6624500 + 6326 822 6518 15572;15573;15574;15575;15576;15577;15578;15579;15580;15581;15582 12648 12648 1 15641 8442200 IGLINDMVR RRLATLLGLQAPPTRIGLINDMVRFNVLQY QAPPTRIGLINDMVRFNVLQYVVPEVKDLY R I G V R F 0 1 1 1 0 0 0 1 0 2 1 0 1 0 0 0 0 0 0 1 0 0 9 0 1029.5641 Q14152 Q14152 368 376 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00083989 136.27 By MS/MS By MS/MS 3.08 1.44 2 3 3 3 1 1 10 3 49779000 49065000 714040 6327 1422 6519;6520 15583;15584;15585;15586;15587;15588;15589;15590;15591;15592;15593;15594;15595 12649;12650;12651;12652;12653;12654;12655;12656;12657;12658 12655 814 10 2228900 548850 IGLIQFCLSAPK QKVSNSGITRVEKAKIGLIQFCLSAPKTDM KAKIGLIQFCLSAPKTDMDNQIVVSDYAQM K I G P K T 1 0 0 0 1 1 0 1 0 2 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.7428 P50991 P50991 246 257 CCT4 T-complex protein 1 subunit delta yes yes 2 0.00030709 143.5 By MS/MS 7 0.816 1 1 1 3 2711700 2711700 0 6328 985 6521 15596;15597;15598 12659;12660 12659 2 21441 0 IGLSVSEVIEGYEIACR VFAGALLELAEELLRIGLSVSEVIEGYEIA LSVSEVIEGYEIACRKAHEILPNLVCCSAK R I G C R K 1 1 0 0 1 0 3 2 0 3 1 0 0 0 0 2 0 0 1 2 0 0 17 0 1893.9506 P50990 P50990 121 137 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00021827 145.81 By MS/MS 6.5 0.5 1 1 2 201570 201570 0 6329 984 6522 15599;15600 12661;12662 12662 2 1615 0 IGLTNLLGAR SLETPVDSQLYRYVKIGLTNLLGARLYFAP YRYVKIGLTNLLGARLYFAPKVLTPYCYTI K I G A R L 1 1 1 0 0 0 0 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1026.6186 Q14CZ7 Q14CZ7 542 551 FASTKD3 FAST kinase domain-containing protein 3 yes yes 2 7.0962E-08 195.57 By MS/MS 5.5 0.5 1 1 2 1416300 1416300 0 6330 1467 6523 15601;15602 12663 12663 1 10037 0 IGMGATLDIQR LEPIFSSSEPTSEARIGMGATLDIQRQQRM SEARIGMGATLDIQRQQRMELLDRQLMFSQ R I G Q R Q 1 1 0 1 0 1 0 2 0 2 1 0 1 0 0 0 1 0 0 0 0 0 11 0 1173.6176 Q8NBM4 Q8NBM4 233 243 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 6.4015E-05 154.85 By MS/MS 1 0 1 1 258650 258650 0 6331 1940 6524 15603 12664 12664 962 1 62327 0 IGNAYAVLSNPEK PDKNHAPGATDAFKKIGNAYAVLSNPEKRK KKIGNAYAVLSNPEKRKQYDLTGNEEQACN K I G E K R 2 0 2 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 13 0 1374.7143 Q8TBM8 Q8TBM8 152 164 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.0004403 158.56 By MS/MS 7.5 0.5 1 1 2 1632600 1632600 0 6332 1984 6525 15604;15605 12665 12665 1 24749 0 IGNFIVK VGICGSDVHYWEYGRIGNFIVKKPMVLGHE VHYWEYGRIGNFIVKKPMVLGHEASGTVEK R I G V K K 0 0 1 0 0 0 0 1 0 2 0 1 0 1 0 0 0 0 0 1 0 0 7 0 789.47487 Q00796 Q00796 57 63 SORD Sorbitol dehydrogenase yes yes 2 0.012539 128.82 By MS/MS 7 0 1 1 887760 887760 0 6333 1263 6526 15606 12666 12666 1 13936 0 IGNSYFKEEK ENREDYRQIAKAYARIGNSYFKEEKYKDAI KAYARIGNSYFKEEKYKDAIHFYNKSLAEH R I G E K Y 0 0 1 0 0 0 2 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 10 1 1213.5979 P31948 P31948 306 315 STIP1 Stress-induced-phosphoprotein 1 yes yes 2;3 0.0056721 114.97 By MS/MS 5.8 0.748 2 2 1 5 8821000 8821000 0 6334 795 6527 15607;15608;15609;15610;15611 12667;12668;12669;12670 12670 4 81340 0 IGNTGGMLDNILASK IGPATVGGIKPGCFKIGNTGGMLDNILASK IGNTGGMLDNILASKLYRPGSVAYVSRSGG K I G S K L 1 0 2 1 0 0 0 3 0 2 2 1 1 0 0 1 1 0 0 0 0 0 15 0 1502.7763 P53396 P53396 636 650 ACLY ATP-citrate synthase yes yes 2 1.2903E-16 259.27 By MS/MS 3.67 1.37 1 1 2 2 6 7561700 7561700 0 6335 1030 6528;6529 15612;15613;15614;15615;15616;15617 12671;12672;12673;12674;12675 12674 566 5 668830 0 IGPILDNSTLQSEVKPILEK PVANVRFNVAKSLQKIGPILDNSTLQSEVK DNSTLQSEVKPILEKLTQDQDVDVKYFAQE K I G E K L 0 0 1 1 0 1 2 1 0 3 3 2 0 0 2 2 1 0 0 1 0 0 20 1 2193.2256 P30153 P30153 547 566 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 3 0.00067141 100.45 By MS/MS 5.5 0.5 1 1 2 7645800 7645800 0 6336 769 6530 15618;15619 12676 12676 1 54364 0 IGPILDTNALQGEVKPVLQK QVANVRFNVAKSLQKIGPILDTNALQGEVK DTNALQGEVKPVLQKLGQDEDMDVKYFAQE K I G Q K L 1 0 1 1 0 2 1 2 0 2 3 2 0 0 2 0 1 0 0 2 0 0 20 1 2132.2205 P30154 P30154 559 578 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 3 0.0005126 103.67 By MS/MS 6 0 1 1 989660 989660 0 6337 770 6531 15620 12677 12677 1 6803.2 0 IGPKKPLPDHVSIVEPK GIKVKIMLPWDPTGKIGPKKPLPDHVSIVE PKKPLPDHVSIVEPKDEILPTTPISEQKGG K I G P K D 0 0 0 1 0 0 1 1 1 2 1 3 0 0 4 1 0 0 0 2 0 0 17 2 1853.0775 P23396 P23396 198 214 RPS3 40S ribosomal protein S3 yes yes 4 0.036023 57.328 By MS/MS 8 0 1 1 2275700 2275700 0 6338 703 6532 15621 12678 12678 1 28730 0 IGPLGLSPK CTGGEVGATSALAPKIGPLGLSPKKVGDDI SALAPKIGPLGLSPKKVGDDIAKATGDWKG K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0060994 107.29 By MS/MS By matching 9.33 0.471 2 1 2 1 5484400 5384800 99650 6339 766 6533 15622;15623;15624 12679;12680 12680 2 168770 227230 IGQETDKTTTR RLKEFLALASSSLLKIGQETDKTTTRNRES SLLKIGQETDKTTTRNRESVYLLLDMIVQE K I G T R N 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 0 11 1 1248.631 Q9Y2A7 Q9Y2A7 1069 1079 NCKAP1 Nck-associated protein 1 yes yes 2 4.2808E-06 192.5 By MS/MS 4 0 1 1 380490 380490 0 6340 2824 6534 15625 12681 12681 1 35807 0 IGQFVFAR WLLAVRSIQPEEKERIGQFVFARDAKAAMA QPEEKERIGQFVFARDAKAAMAGRLMIRKL R I G A R D 1 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 8 0 936.51814 Q9NRN7 Q9NRN7 48 55 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 2 0.0039801 130.77 By MS/MS 7 0 1 1 1070600 1070600 0 6341 2556 6535 15626 12682 12682 1 16806 0 IGQGTFGEVFK CPFCDEVSKYEKLAKIGQGTFGEVFKARHR KLAKIGQGTFGEVFKARHRKTGQKVALKKV K I G F K A 0 0 0 0 0 1 1 3 0 1 0 1 0 2 0 0 1 0 0 1 0 0 11 0 1181.6081 P50750 P50750 25 35 CDK9 Cyclin-dependent kinase 9 yes yes 2 0.00021066 151.22 By MS/MS 7.5 0.5 1 1 2 937460 937460 0 6342 980 6536 15627;15628 12683 12683 1 14559 0 IGQGYLIK KGYHHRTEINKKIYKIGQGYLIKDGKLIKN INKKIYKIGQGYLIKDGKLIKNNASTDYDL K I G I K D 0 0 0 0 0 1 0 2 0 2 1 1 0 0 0 0 0 0 1 0 0 0 8 0 890.52255 P39023 P39023 287 294 RPL3 60S ribosomal protein L3 yes yes 2 0.00202 143.02 By MS/MS 6.5 0.5 1 1 2 3836600 3836600 0 6343 854 6537 15629;15630 12684 12684 1 56525 0 IGQKENVVVYR WNPATDAQAVDRVYRIGQKENVVVYRLITC RVYRIGQKENVVVYRLITCGTVEEKIYRRQ R I G Y R L 0 1 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 3 0 0 11 1 1303.7248 Q2NKX8 Q2NKX8 573 583 ERCC6L DNA excision repair protein ERCC-6-like yes yes 3 0.0044417 125.68 By MS/MS 3 0 1 1 263300 263300 0 6344 1569 6538 15631 12685 12685 1 4817.7 0 IGQLEEQLEQEAK VKSKFKATISALEAKIGQLEEQLEQEAKER AKIGQLEEQLEQEAKERAAANKLVRRTEKK K I G A K E 1 0 0 0 0 3 4 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 13 0 1513.7624 P35580 P35580 1823 1835 MYH10 Myosin-10 yes yes 2 4.5163E-33 298.84 By MS/MS 2 0 1 1 541770 541770 0 6345 825 6539 15632 12686 12686 1 183250 0 IGQPTVSYFLK PTKILVKPDRTFEIKIGQPTVSYFLKAAAG FEIKIGQPTVSYFLKAAAGIEKGARQTGKE K I G L K A 0 0 0 0 0 1 0 1 0 1 1 1 0 1 1 1 1 0 1 1 0 0 11 0 1251.6863 Q9Y3B7 Q9Y3B7 82 92 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0067538 99.283 By MS/MS 9 0 1 1 3867100 3867100 0 6346 2866 6540 15633 12687 12687 1 76105 0 IGQQNEVR WNPHQDLQAQDRAHRIGQQNEVRVLRLCTV AQDRAHRIGQQNEVRVLRLCTVNSVEEKIL R I G V R V 0 1 1 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 942.48829 P51532;P51531 P51532 1193 1200 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 0.00774 113.26 By MS/MS 2 0.816 1 1 1 3 1437900 1437900 0 6347 995 6541 15634;15635;15636 12688;12689 12689 2 388820 0 IGQQVDREPGDVATPPR VKKAIFDRLCKQLEKIGQQVDREPGDVATP QQVDREPGDVATPPRKRKKIVVEAPAKEME K I G P R K 1 2 0 2 0 2 1 2 0 1 0 0 0 0 3 0 1 0 0 2 0 0 17 1 1833.9333 Q9Y5N6 Q9Y5N6 182 198 ORC6 Origin recognition complex subunit 6 yes yes 3 7.7644E-07 138.19 By MS/MS 8 0 1 1 200840 200840 0 6348 2918 6542 15637 12690 12690 0 2535.6 0 IGQTIGYQIR AIAVAERVAAERRERIGQTIGYQIRLESRV ERRERIGQTIGYQIRLESRVSPKTLLTFCT R I G I R L 0 1 0 0 0 2 0 2 0 3 0 0 0 0 0 0 1 0 1 0 0 0 10 0 1147.635 Q9H6S0 Q9H6S0 268 277 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.001453 114.86 By MS/MS 3.5 0.5 1 1 2 622670 622670 0 6349 2458 6543 15638;15639 12691 12691 1 20430 0 IGQTKPVVVYR WNPQSDLQAQDRCHRIGQTKPVVVYRLVTA RCHRIGQTKPVVVYRLVTANTIDQKIVERA R I G Y R L 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 0 1 0 1 3 0 0 11 1 1258.7398 Q9NRZ9 Q9NRZ9 711 721 HELLS Lymphoid-specific helicase yes yes 3 0.043848 91.469 By MS/MS 4 0 1 1 904840 904840 0 6350 2565 6544 15640 12692 12692 1 85151 0 IGRIEDVTPIPSDSTR GAQSALRALARSGMKIGRIEDVTPIPSDST GRIEDVTPIPSDSTRRKGGRRGRRL_____ K I G T R R 0 2 0 2 0 0 1 1 0 3 0 0 0 0 2 2 2 0 0 1 0 0 16 1 1754.9163 P62263 P62263 126 141 RPS14 40S ribosomal protein S14 yes yes 2;3 7.5304E-17 269.14 By MS/MS 10 0 2 2 34500000 34500000 0 6351 1147 6545 15641;15642 12693;12694 12694 2 1859400 0 IGRIEDVTPIPSDSTRR GAQSALRALARSGMKIGRIEDVTPIPSDST RIEDVTPIPSDSTRRKGGRRGRRL______ K I G R R K 0 3 0 2 0 0 1 1 0 3 0 0 0 0 2 2 2 0 0 1 0 0 17 2 1911.0174 P62263 P62263 126 142 RPS14 40S ribosomal protein S14 yes yes 2;3 0.00039453 151.49 By MS/MS 10 0 3 3 8165400 8165400 0 6352 1147 6546 15643;15644;15645 12695;12696;12697;12698 12696 4 440080 0 IGRNECVVVIR ELSRRRIRSINKLIRIGRNECVVVIRVDKE KLIRIGRNECVVVIRVDKEKGYIDLSKRRV R I G I R V 0 2 1 0 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 3 0 0 11 1 1313.7238 P05198 P05198 65 75 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2;3 0.017128 126.71 By MS/MS 8.2 1.17 2 1 1 1 5 22141000 22141000 0 6353 489 6547 15646;15647;15648;15649;15650 12699;12700 12699 2 356320 0 IGSCTQQDVELHVQK SIVDVEGVVRKVNQKIGSCTQQDVELHVQK IGSCTQQDVELHVQKIYVISLAEPRLPLQL K I G Q K I 0 0 0 1 1 3 1 1 1 1 1 1 0 0 0 1 1 0 0 2 0 0 15 0 1740.8465 P14868 P14868 127 141 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.00031496 169.3 By MS/MS 6.5 0.5 1 1 2 16090000 16090000 0 6354 620 6548 15651;15652 12701 12701 1 115350 0 IGSEGQGFLIAVR RAVIFEDCAVPVANRIGSEGQGFLIAVRGL NRIGSEGQGFLIAVRGLNGGRINIASCSLG R I G V R G 1 1 0 0 0 1 1 3 0 2 1 0 0 1 0 1 0 0 0 1 0 0 13 0 1345.7354 Q9UKU7 Q9UKU7 259 271 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 2.6308E-11 225.93 By MS/MS 7.5 0.5 1 1 2 1241600 1241600 0 6355 2764 6549 15653;15654 12702 12702 1 19220 0 IGSESTKPPITFDK EDLNLWWAAWNTWYRIGSESTKPPITFDKL RIGSESTKPPITFDKLTFIPSQPFLTALIQ R I G D K L 0 0 0 1 0 0 1 1 0 2 0 2 0 1 2 2 2 0 0 0 0 0 14 1 1518.793 Q7Z3U7 Q7Z3U7 1250 1263 MON2 Protein MON2 homolog yes yes 3 0.041629 64.374 By MS/MS 2 0 1 1 441390 441390 0 6356 1787 6550 15655 12703 12703 1 149300 0 IGSEVQVLGR VAALCALGGFKETIKIGSEVQVLGRGISGS KETIKIGSEVQVLGRGISGSIGVVASINEQ K I G G R G 0 1 0 0 0 1 1 2 0 1 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1056.5928 Q9Y4D8 Q9Y4D8 1746 1755 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes yes 2 1.8131E-07 183.43 By MS/MS 1.5 0.5 1 1 2 220750 220750 0 6357 2892 6551 15656;15657 12704 12704 1 63947 0 IGSGFDNIDIK REDLEKFKALRIIVRIGSGFDNIDIKSAGD IIVRIGSGFDNIDIKSAGDLGIAVCNVPAA R I G I K S 0 0 1 2 0 0 0 2 0 3 0 1 0 1 0 1 0 0 0 0 0 0 11 0 1177.5979 Q13363 Q13363 98 108 CTBP1 C-terminal-binding protein 1 yes yes 2 0.042581 73.841 By MS/MS 6.5 0.5 1 1 2 2291700 2291700 0 6358 1374 6552 15658;15659 12705 12705 1 29868 0 IGSKENTK SKAKVNDFLAEIFKKIGSKENTKEGLAELY LAEIFKKIGSKENTKEGLAELYEYKKKYSD K I G T K E 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 1 1 0 0 0 0 0 8 1 875.47125 Q14008 Q14008 1840 1847 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0030937 156.51 By MS/MS 2 0 1 1 87284 87284 0 6359 1417 6553 15660 12706 12706 1 29523 0 IGSLIDVNQSK EIVIGDEHISFTTSKIGSLIDVNQSKDPEG TTSKIGSLIDVNQSKDPEGLRVFYYLVQDL K I G S K D 0 0 1 1 0 1 0 1 0 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1172.6401 Q96A72;P61326 Q96A72 106 116 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog yes no 2 0.0006766 128.03 By MS/MS 10 0 1 1 618260 618260 0 6360 2105 6554 15661 12707 12707 1 33322 0 IGSTSGAEAANK PPRPPSRRGRTIPDKIGSTSGAEAANKIIT PDKIGSTSGAEAANKIITVPVFHLFHKLLA K I G N K I 3 0 1 0 0 0 1 2 0 1 0 1 0 0 0 2 1 0 0 0 0 0 12 0 1104.5411 Q9NR09 Q9NR09 3947 3958 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 8.8151E-05 157.78 By MS/MS 1.5 0.5 1 1 2 150780 150780 0 6361 2543 6555 15662;15663 12708 12708 1 43290 0 IGSYLSASTR EQGPIRCNTTVCLGKIGSYLSASTRHRVLT VCLGKIGSYLSASTRHRVLTSAFSRATRDP K I G T R H 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 3 1 0 1 0 0 0 10 0 1053.5455 Q96KG9 Q96KG9 455 464 SCYL1 N-terminal kinase-like protein yes yes 2 0.0044249 106.88 By MS/MS 4.5 0.5 1 1 2 2453000 2453000 0 6362 2188 6556 15664;15665 12709 12709 1 203850 0 IGVCSLLEPPSQATTK DLYGSEVVTGTVSNKIGVCSLLEPPSQATT GVCSLLEPPSQATTKLSSENFRGTLTSLAL K I G T K L 1 0 0 0 1 1 1 1 0 1 2 1 0 0 2 2 2 0 0 1 0 0 16 0 1699.8815 Q562E7 Q562E7 1891 1906 WDR81 WD repeat-containing protein 81 yes yes 2 0.030561 89.356 By MS/MS 2 0 1 1 0 0 0 6363 1593 6557 15666 12710 12710 1 0 0 IGVDLIMK FTPLTVKYAYYDTERIGVDLIMKTCFSPNR AYYDTERIGVDLIMKTCFSPNRVIGLSSDL R I G M K T 0 0 0 1 0 0 0 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 8 0 887.51502 O00303 O00303 247 254 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.0048311 126.28 By MS/MS By matching 7 1.07 3 2 1 1 6 1 31750000 31635000 115000 6364 99 6558;6559 15667;15668;15669;15670;15671;15672;15673 12711;12712;12713;12714 12714 62 4 313040 117840 IGVITNR TGNLCMVTGGANLGRIGVITNRERHPGSFD TGGANLGRIGVITNRERHPGSFDVVHVKDA R I G N R E 0 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 7 0 771.46029 P62701 P62701 192 198 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.046647 92.191 By MS/MS 9 0.816 1 1 1 3 56286000 56286000 0 6365 1165 6560 15674;15675;15676 12715 12715 1 784030 0 IGVLDEGK RRLFEGNALLRRLVRIGVLDEGKMKLDYIL LLRRLVRIGVLDEGKMKLDYILGLKIEDFL R I G G K M 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 829.45453 P46781 P46781 84 91 RPS9 40S ribosomal protein S9 yes yes 2 0.0068542 116.9 By MS/MS By matching 9 0.707 1 2 1 3 1 33900000 33826000 73612 6366 918 6561 15677;15678;15679;15680 12716;12717 12717 2 672940 167860 IGVLDEGKMK RRLFEGNALLRRLVRIGVLDEGKMKLDYIL RRLVRIGVLDEGKMKLDYILGLKIEDFLER R I G M K L 0 0 0 1 0 0 1 2 0 1 1 2 1 0 0 0 0 0 0 1 0 0 10 1 1088.59 P46781 P46781 84 93 RPS9 40S ribosomal protein S9 yes yes 3 0.0034871 128.28 By MS/MS 9 0 2 2 2196400 2196400 0 6367 918 6562;6563 15681;15682 12718;12719 12719 479 2 43226 0 IGVMSLIR GVPREGLSRQHVLTRIGVMSLIRKKVQEFE RQHVLTRIGVMSLIRKKVQEFEHVNGRWSM R I G I R K 0 1 0 0 0 0 0 1 0 2 1 0 1 0 0 1 0 0 0 1 0 0 8 0 887.52626 Q14839 Q14839 1496 1503 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.022363 96.19 By MS/MS 2 0.816 1 1 1 3 752260 752260 0 6368 1459 6564 15683;15684;15685 12720 12720 855 1 221990 0 IGVNQPK LADSYLDEGFLLDKKIGVNQPKRIENAKIL EGFLLDKKIGVNQPKRIENAKILIANTGMD K I G P K R 0 0 1 0 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 7 0 754.43374 P78371 P78371 224 230 CCT2 T-complex protein 1 subunit beta yes yes 2 0.029703 104.94 By MS/MS 6.5 0.5 1 1 2 44517000 44517000 0 6369 1222 6565 15686;15687 12721;12722 12721 2 336420 0 IGYSSPLTLSDQSSK LELTAEISCFTYGCRIGYSSPLTLSDQSSK IGYSSPLTLSDQSSKIKKGSKGDCTVLKPT R I G S K I 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 5 1 0 1 0 0 0 15 0 1581.7886 O60488 O60488 340 354 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 0.00034797 136.24 By MS/MS 5 0 1 1 3057200 3057200 0 6370 257 6566 15688 12723 12723 1 30662 0 IGYSSPQTLADQSSK LELSAELVCLSHGCRIGYSSPQTLADQSSK IGYSSPQTLADQSSKIKKGSKGDTSMLKPT R I G S K I 1 0 0 1 0 2 0 1 0 1 1 1 0 0 1 4 1 0 1 0 0 0 15 0 1580.7682 O95573 O95573 349 363 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 2.1123E-16 251.91 By MS/MS By matching 4.14 2.03 1 1 1 2 1 1 6 1 13511000 13473000 37682 6371 417 6567 15689;15690;15691;15692;15693;15694;15695 12724;12725;12726 12724 3 305780 31645 IHAGPITK HIDLPNEQARLDILKIHAGPITKHGEIDYE ARLDILKIHAGPITKHGEIDYEAIVKLSDG K I H T K H 1 0 0 0 0 0 0 1 1 2 0 1 0 0 1 0 1 0 0 0 0 0 8 0 835.49159 P62333 P62333 315 322 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.03615 87.754 By MS/MS 7 0 1 1 5646800 5646800 0 6372 1159 6568 15696 12727 12727 1 88645 0 IHAYSQLLESYR WLFAPHYRYYVREMRIHAYSQLLESYRSLT EMRIHAYSQLLESYRSLTLGYMAEAFGVGV R I H Y R S 1 1 0 0 0 1 1 0 1 1 2 0 0 0 0 2 0 0 2 0 0 0 12 0 1478.7518 Q15008 Q15008 301 312 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00033456 141.71 By MS/MS 7 0 1 1 1375800 1375800 0 6373 1471 6569 15697 12728 12728 1 21597 0 IHDPQLLTER DMFMRGEEILSGAQRIHDPQLLTERALHHG SGAQRIHDPQLLTERALHHGIDLEKIKAYI R I H E R A 0 1 0 1 0 1 1 0 1 1 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1220.6513 P14868 P14868 432 441 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.024282 94.409 By MS/MS 6 0 1 1 4651100 4651100 0 6374 620 6570 15698 12729 12729 1 31973 0 IHEDIFDIIDR GAGNNWASGFSQGEKIHEDIFDIIDREADG QGEKIHEDIFDIIDREADGSDSLEGFVLCH K I H D R E 0 1 0 3 0 0 1 0 1 4 0 0 0 1 0 0 0 0 0 0 0 0 11 0 1384.6987 P23258;Q9NRH3 P23258 114 124 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 0.00013392 148.91 By MS/MS 6.5 0.5 1 1 2 511730 511730 0 6375 701 6571 15699;15700 12730 12730 1 4689.6 0 IHEDTKEINEK ELQKRIAEMETQKEKIHEDTKEINEKSNIL QKEKIHEDTKEINEKSNILSNEMKAKNKDV K I H E K S 0 0 1 1 0 0 3 0 1 2 0 2 0 0 0 0 1 0 0 0 0 0 11 1 1354.6729 Q9NTJ3 Q9NTJ3 344 354 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2;3 0.011716 120.63 By MS/MS 3 0 2 2 1075500 1075500 0 6376 2575 6572 15701;15702 12731;12732 12732 2 19678 0 IHEGCEEPATHNALAK KRNRLKLLLPWLEARIHEGCEEPATHNALA HEGCEEPATHNALAKIYIDSNNNPERFLRE R I H A K I 3 0 1 0 1 0 3 1 2 1 1 1 0 0 1 0 1 0 0 0 0 0 16 0 1775.8261 Q00610 Q00610 866 881 CLTC Clathrin heavy chain 1 yes yes 3 0.0017788 185.2 By MS/MS By matching 2.29 1.03 2 2 2 1 4 3 5190700 4860400 330280 6377 1262 6573 15703;15704;15705;15706;15707;15708;15709 12733;12734;12735;12736 12734 4 681950 150630 IHEPIMLK LYDVMKSKKHRTWQKIHEPIMLKYLELCVD KHRTWQKIHEPIMLKYLELCVDLRKSHLAK K I H L K Y 0 0 0 0 0 0 1 0 1 2 1 1 1 0 1 0 0 0 0 0 0 0 8 0 979.55247 Q14152 Q14152 46 53 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0091144 107.9 By MS/MS 2.75 0.433 1 3 4 3955500 3955500 0 6378 1422 6574;6575 15710;15711;15712;15713 12737;12738;12739 12737 815 3 140160 0 IHFHNLQGEK SRIVNVSSLAHHLGRIHFHNLQGEKFYNAG HHLGRIHFHNLQGEKFYNAGLAYCHSKLAN R I H E K F 0 0 1 0 0 1 1 1 2 1 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1221.6255 Q8TC12 Q8TC12 185 194 RDH11 Retinol dehydrogenase 11 yes yes 2;3 0.0001525 150.36 By MS/MS 8 0 2 2 7248700 7248700 0 6379 1988 6576 15714;15715 12740;12741 12741 2 91514 0 IHFPLATYAPVISAEK VDLTEFQTNLVPYPRIHFPLATYAPVISAE HFPLATYAPVISAEKAYHEQLTVAEITNAC R I H E K A 3 0 0 0 0 0 1 0 1 2 1 1 0 1 2 1 1 0 1 1 0 0 16 0 1755.956 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 265 280 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2;3 0.00041382 168.02 By MS/MS 6.33 0.471 2 1 3 26192000 26192000 0 6380 1210;1751;2290;1211 6577 15716;15717;15718 12742;12743;12744;12745 12742 4 181050 0 IHHSGAK IVDAEWNILYDKLEKIHHSGAKVVLSKLPI ILYDKLEKIHHSGAKVVLSKLPIGDVATQY K I H A K V 1 0 0 0 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 748.39802 Q99832 Q99832 281 287 CCT7 T-complex protein 1 subunit eta yes yes 2 0.034026 101.69 By MS/MS 6 0 1 1 1679600 1679600 0 6381 2270 6578 15719 12746 12746 1 11546 0 IHIDLPNEQAR TLDPALLRPGRLDRKIHIDLPNEQARLDIL LDRKIHIDLPNEQARLDILKIHAGPITKHG K I H A R L 1 1 1 1 0 1 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 11 0 1304.6837 P62333 P62333 299 309 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.052047 68.893 By MS/MS 7 0 1 1 2639200 2639200 0 6382 1159 6579 15720 12747 12747 1 41431 0 IHLAQSLHK KKEHDPVGQMVNNPKIHLAQSLHKLSTACP MVNNPKIHLAQSLHKLSTACPGRVPSMVST K I H H K L 1 0 0 0 0 1 0 0 2 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1045.6033 P55060 P55060 926 934 CSE1L Exportin-2 yes yes 3 0.0020491 134.05 By MS/MS 4 0 1 1 2529400 2529400 0 6383 1053 6580 15721 12748 12748 1 238030 0 IHMGSCAENTAK EDLIVKDGLTDVYNKIHMGSCAENTAKKLN YNKIHMGSCAENTAKKLNIARNEQDAYAIN K I H A K K 2 0 1 0 1 0 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 12 0 1317.5806 P24752 P24752 191 202 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.004298 105.2 By MS/MS 7 0 1 1 250780 250780 0 6384 716 6581 15722 12749 12749 355 1 3936.9 0 IHNAELQR DLVLNGNEIGGGSIRIHNAELQRYILATLL IGGGSIRIHNAELQRYILATLLKEDVKMLS R I H Q R Y 1 1 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 979.51993 Q6PI48 Q6PI48 543 550 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.033356 88.819 By MS/MS 5 0 1 1 782890 782890 0 6385 1717 6582 15723 12750 12750 1 7851.9 0 IHNAENIQPGEQK RPEEADETWDSKEDKIHNAENIQPGEQKYE DKIHNAENIQPGEQKYEYKSDQWKPLNLEE K I H Q K Y 1 0 2 0 0 2 2 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 13 0 1476.7321 Q04637 Q04637 581 593 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0026796 125.36 By MS/MS 2.2 0.748 1 2 2 5 11123000 11123000 0 6386 1291 6583 15724;15725;15726;15727;15728 12751;12752 12751 1 3240000 0 IHNAENIQPGEQKYEYK RPEEADETWDSKEDKIHNAENIQPGEQKYE NAENIQPGEQKYEYKSDQWKPLNLEEKKRY K I H Y K S 1 0 2 0 0 2 3 1 1 2 0 2 0 0 1 0 0 0 2 0 0 0 17 1 2059.9963 Q04637 Q04637 581 597 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3;4 7.044E-05 187 By MS/MS 2.4 0.49 3 2 5 10136000 10136000 0 6387 1291 6584 15729;15730;15731;15732;15733 12753;12754;12755 12753 3 3306700 0 IHPTSVISGYR AAELLKNADELVKQKIHPTSVISGYRLACK VKQKIHPTSVISGYRLACKEAVRYINENLI K I H Y R L 0 1 0 0 0 0 0 1 1 2 0 0 0 0 1 2 1 0 1 1 0 0 11 0 1228.6564 P17987 P17987 112 122 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.010492 89.679 By MS/MS 6.4 1.02 1 2 1 1 5 16661000 16661000 0 6388 648 6585 15734;15735;15736;15737;15738 12756;12757 12757 2 127260 0 IHQIEYAMEAVK NQYDNDVTVWSPQGRIHQIEYAMEAVKQGS QGRIHQIEYAMEAVKQGSATVGLKSKTHAV R I H V K Q 2 0 0 0 0 1 2 0 1 2 0 1 1 0 0 0 0 0 1 1 0 0 12 0 1430.7228 P25786 P25786 19 30 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.0011229 122.18 By MS/MS 8 0 2 2 1817600 1817600 0 6389 724 6586;6587 15739;15740 12758;12759 12758 362 2 22947 0 IHSDCAANQQVTYR CREGEDNSKRNPIAKIHSDCAANQQVTYRI KIHSDCAANQQVTYRISGVGIDQPPYGIFV K I H Y R I 2 1 1 1 1 2 0 0 1 1 0 0 0 0 0 1 1 0 1 1 0 0 14 0 1661.758 Q02413 Q02413 73 86 DSG1 Desmoglein-1 yes yes 2;3 1.3397E-07 188.09 By MS/MS By MS/MS 4.82 2.98 3 1 3 2 2 1 1 1 1 2 3 14 3343500 303080 3040400 6390 1277 6588 15741;15742;15743;15744;15745;15746;15747;15748;15749;15750;15751;15752;15753;15754;15755;15756;15757 12760;12761;12762;12763;12764;12765;12766;12767;12768;12769;12770;12771 12764 12 25537 2581600 IHVLEAQDLIAK HTTPDSQFGTEHVLRIHVLEAQDLIAKDRF VLRIHVLEAQDLIAKDRFLGGLVKGKSDPY R I H A K D 2 0 0 1 0 1 1 0 1 2 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1348.7715 Q9BSJ8 Q9BSJ8 651 662 ESYT1 Extended synaptotagmin-1 yes yes 2 0.021761 84.31 By MS/MS 2.5 0.5 1 1 2 388980 388980 0 6391 2308 6589 15758;15759 12772 12772 1 19631 0 IIAATIENAQPILQIDNAR DYSPYFKTIEDLRNKIIAATIENAQPILQI TIENAQPILQIDNARLAADDFRTKYEHELA K I I A R L 4 1 2 1 0 2 1 0 0 5 1 0 0 0 1 0 1 0 0 0 0 0 19 0 2063.1375 CON__P08779;P08779 CON__P08779 178 196 KRT16 Keratin, type I cytoskeletal 16 yes no 2 2.1655E-45 333.71 By MS/MS 6 0 1 1 1208200 1208200 0 + 6392 47 6590 15760 12773 12773 1 8305.3 0 IIADIFEYTAK MVRNTYIFPPEPSMKIIADIFEYTAKHMPK PSMKIIADIFEYTAKHMPKFNSISISGYHM K I I A K H 2 0 0 1 0 0 1 0 0 3 0 1 0 1 0 0 1 0 1 0 0 0 11 0 1282.6809 P22033 P22033 241 251 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 1.0235E-05 172.98 By MS/MS 5 0 1 1 789490 789490 0 6393 685 6591 15761 12774 12774 1 7918.2 0 IIAEGANGPTTPEADKIFLER EKQLTKSNAPRVKAKIIAEGANGPTTPEAD NGPTTPEADKIFLERNIMVIPDLYLNAGGV K I I E R N 3 1 1 1 0 0 3 2 0 3 1 1 0 1 2 0 2 0 0 0 0 0 21 1 2241.1641 P00367;P49448 P00367 400 420 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 3.236E-05 178.68 By MS/MS 6 0 1 1 3008700 3008700 0 6394 441 6592 15762 12775 12775 1 20682 0 IIAFVGSPVEDNEK HLALKHRQGKNHKMRIIAFVGSPVEDNEKD RIIAFVGSPVEDNEKDLVKLAKRLKKEKVN R I I E K D 1 0 1 1 0 0 2 1 0 2 0 1 0 1 1 1 0 0 0 2 0 0 14 0 1516.7773 P55036 P55036 109 122 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2 0.0018199 112.94 By MS/MS 9 0 1 1 224490 224490 0 6395 1052 6593 15763 12776 12776 1 4418 0 IIAFVGSPVEDNEKDLVK HLALKHRQGKNHKMRIIAFVGSPVEDNEKD FVGSPVEDNEKDLVKLAKRLKKEKVNVDII R I I V K L 1 0 1 2 0 0 2 1 0 2 1 2 0 1 1 1 0 0 0 3 0 0 18 1 1972.0517 P55036 P55036 109 126 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2;3 1.0283E-32 277.82 By MS/MS 6.5 0.5 2 2 4 18479000 18479000 0 6396 1052 6594 15764;15765;15766;15767 12777;12778;12779 12778 3 137610 0 IIAHAQLLEQHR ELTRIDRWFLHRMKRIIAHAQLLEQHRGQP MKRIIAHAQLLEQHRGQPLPPDLLQQAKCL R I I H R G 2 1 0 0 0 2 1 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1427.7997 P27708 P27708 843 854 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 0.038243 96.067 By MS/MS 1.5 0.5 1 1 2 754780 754780 0 6397 745 6595 15768;15769 12780 12780 1 244430 0 IIAINSELTQPK LFDRLRDENPDFREKIIAINSELTQPKLAL REKIIAINSELTQPKLALSEEDKEVIIDST K I I P K L 1 0 1 0 0 1 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1325.7555 Q8WVX9 Q8WVX9 79 90 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 1.6317E-08 205.13 By MS/MS By MS/MS 5.78 2.97 1 1 1 2 1 1 1 1 8 1 20500000 20422000 78364 6398 2031 6596 15770;15771;15772;15773;15774;15775;15776;15777;15778 12781;12782;12783;12784;12785 12781 5 380870 80300 IIALSVK KIVANPEDTRSLEARIIALSVKIRSYEEHL DTRSLEARIIALSVKIRSYEEHLEKHRKDK R I I V K I 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 7 0 742.49528 P82914 P82914 129 135 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.01823 114.02 By MS/MS 4 0.816 1 1 1 3 4529500 4529500 0 6399 1235 6597 15779;15780;15781 12786 12786 1 362170 0 IIANALSSEPACLAEIEEDKAR LAFRDQNILLGTTYRIIANALSSEPACLAE SEPACLAEIEEDKARRILELSGSSSEDSEK R I I A R R 5 1 1 1 1 0 4 0 0 3 2 1 0 0 1 2 0 0 0 0 0 0 22 1 2399.2002 P78527 P78527 3336 3357 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.00022233 102.5 By MS/MS 2.5 1.12 1 1 1 1 4 1407900 1407900 0 6400 1225 6598 15782;15783;15784;15785 12787;12788;12789;12790 12789 4 256520 0 IIAPPERK QKEITALAPSTMKIKIIAPPERKYSVWIGG PSTMKIKIIAPPERKYSVWIGGSILASLST K I I R K Y 1 1 0 0 0 0 1 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 8 1 922.56 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P63261 329 336 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 3 0.05312 85.265 By MS/MS 7.5 0.5 1 1 2 14511000 14511000 0 6401 1095;1203;1594 6599 15786;15787 12791 12791 1 227020 0 IIAQCLNK DRYLCRVEEMRQSLRIIAQCLNKMPPGEIK EMRQSLRIIAQCLNKMPPGEIKVDDAKVSP R I I N K M 1 0 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 958.52699 O75306 O75306 343 350 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.0073252 114.72 By MS/MS 6.5 0.5 1 1 2 8666800 8666800 0 6402 308 6600 15788;15789 12792 12792 1 134350 0 IIASSPEMNLPTVSALR LARGFTAAGILSAHKIIASSPEMNLPTVSA ASSPEMNLPTVSALRKMGVNLTRSNKETVK K I I L R K 2 1 1 0 0 0 1 0 0 2 2 0 1 0 2 3 1 0 0 1 0 0 17 0 1797.9659 Q96C36 Q96C36 30 46 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 1.4264E-05 201.3 By MS/MS 7.8 0.748 2 2 1 5 12773000 12773000 0 6403 2120 6601;6602 15790;15791;15792;15793;15794 12793;12794;12795 12794 1013 3 165320 0 IIATCGELLR SLFQEDWTAFQNSIRIIATCGELLRHCGDF QNSIRIIATCGELLRHCGDFEQQLANRILS R I I L R H 1 1 0 0 1 0 1 1 0 2 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1144.6274 P83436 P83436 471 480 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 2 0.010519 93.162 By MS/MS 5 0 1 1 986930 986930 0 6404 1240 6603 15795 12796 12796 1 9898.4 0 IIATVLMTEDIK GPRRSQQGPRKEPRKIIATVLMTEDIKLNK PRKIIATVLMTEDIKLNKAEKAWKPSSKRT K I I I K L 1 0 0 1 0 0 1 0 0 3 1 1 1 0 0 0 2 0 0 1 0 0 12 0 1345.7527 Q04637 Q04637 715 726 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 1.322E-25 290.2 By MS/MS 2 0 1 1 1170200 1170200 0 6405 1291 6604 15796 12797 12797 772 1 395810 0 IICDLVEEK AEGIAWEPVQYFNNKIICDLVEEKFKGIIS QYFNNKIICDLVEEKFKGIISILDEECLRP K I I E K F 0 0 0 1 1 0 2 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1117.5689 O00159 O00159 478 486 MYO1C Unconventional myosin-Ic yes yes 2 0.0010987 132.76 By MS/MS 4 0 1 1 2858800 2858800 0 6406 85 6605 15797 12798 12798 1 269040 0 IICDLVEEKFK AEGIAWEPVQYFNNKIICDLVEEKFKGIIS FNNKIICDLVEEKFKGIISILDEECLRPGE K I I F K G 0 0 0 1 1 0 2 0 0 2 1 2 0 1 0 0 0 0 0 1 0 0 11 1 1392.7323 O00159 O00159 478 488 MYO1C Unconventional myosin-Ic yes yes 2;3 0.025266 101.97 By MS/MS 4 0 2 2 1684300 1684300 0 6407 85 6606 15798;15799 12799;12800 12799 2 158510 0 IIDAALR GINTLVTYDMVPEPKIIDAALRACRRLNDF YDMVPEPKIIDAALRACRRLNDFASTVRIL K I I L R A 2 1 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 770.46504 P20674 P20674 88 94 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 0.017961 114.72 By MS/MS 10 0 1 1 2588900 2588900 0 6408 673 6607 15800 12801 12801 1 139530 0 IIDGLLVMR SKCDWLDGKHVVFGKIIDGLLVMRKIENVP HVVFGKIIDGLLVMRKIENVPTGPNNKPKL K I I M R K 0 1 0 1 0 0 0 1 0 2 2 0 1 0 0 0 0 0 0 1 0 0 9 0 1028.6052 O43447 O43447 144 152 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.00037837 150.05 By MS/MS 9.5 0.5 1 1 2 556440 556440 0 6409 211 6608 15801;15802 12802;12803 12803 108 2 19862 0 IIDISDVFR ATYGTDKPDTRFGMKIIDISDVFRNTEIGF TRFGMKIIDISDVFRNTEIGFLQDALSKPH K I I F R N 0 1 0 2 0 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1076.5866 Q6PI48 Q6PI48 341 349 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.002505 114.89 By MS/MS 6 0.816 1 1 1 3 3812100 3812100 0 6410 1717 6609 15803;15804;15805 12804;12805;12806 12804 3 38062 0 IIDLVLQK DHKEITQQLENICLRIIDLVLQKHVIEFYE LENICLRIIDLVLQKHVIEFYEEILSLAYS R I I Q K H 0 0 0 1 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 8 0 940.59572 O15397 O15397 639 646 IPO8 Importin-8 yes yes 2 0.021068 98.458 By MS/MS 4.5 0.5 1 1 2 5995300 5995300 0 6411 188 6610 15806;15807 12807 12807 1 527430 0 IIDVVYNASNNELVR GNFSWGSECCTRKTRIIDVVYNASNNELVR IIDVVYNASNNELVRTKTLVKNCIVLIDST R I I V R T 1 1 3 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 3 0 0 15 0 1717.8999 P62241 P62241 78 92 RPS8 40S ribosomal protein S8 yes yes 2;3 1.3595E-16 299.64 By MS/MS 8.43 0.904 1 3 2 1 7 68030000 68030000 0 6412 1143 6611 15808;15809;15810;15811;15812;15813;15814 12808;12809;12810;12811;12812;12813;12814 12808 7 911290 0 IIEDCSNSEETVK NVADILFVRTSYVKKIIEDCSNSEETVKLL KKIIEDCSNSEETVKLLRFCCWENPQFSST K I I V K L 0 0 1 1 1 0 3 0 0 2 0 1 0 0 0 2 1 0 0 1 0 0 13 0 1522.6821 Q93008 Q93008 2289 2301 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 6.8031E-08 213.63 By MS/MS 3 1.41 1 1 1 1 1 5 4602900 4602900 0 6413 2085 6612 15815;15816;15817;15818;15819 12815;12816;12817;12818 12817 4 1139700 0 IIEEAPAPGIK YLFERDCSVQRRHQKIIEEAPAPGIKSEVR RHQKIIEEAPAPGIKSEVRKKLGEAAVRAA K I I I K S 2 0 0 0 0 0 2 1 0 3 0 1 0 0 2 0 0 0 0 0 0 0 11 0 1136.6441 Q96RQ3 Q96RQ3 285 295 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 0.00024739 138.98 By MS/MS 5 0 1 1 1045900 1045900 0 6414 2224 6613 15820 12819 12819 1 10490 0 IIEGLQDLDDDVR RQDVINTLLPKVLTRIIEGLQDLDDDVRAV TRIIEGLQDLDDDVRAVAAASLVPVVESLV R I I V R A 0 1 0 4 0 1 1 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 13 0 1499.7468 O14981 O14981 435 447 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.0004551 136.27 By MS/MS 2 0 1 1 168580 168580 0 6415 154 6614 15821 12820 12820 1 57020 0 IIENELEGFGIR ILIVLDVLKPLGHKKIIENELEGFGIRLNS HKKIIENELEGFGIRLNSKPPNIGFKKKDK K I I I R L 0 1 1 0 0 0 3 2 0 3 1 0 0 1 0 0 0 0 0 0 0 0 12 0 1388.73 Q9Y295 Q9Y295 160 171 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 2.8436E-06 194.48 By MS/MS 7 0 1 1 1463100 1463100 0 6416 2822 6615 15822 12821 12821 1 22968 0 IIEPIQSR SKTTRFALACNASDKIIEPIQSRCAVLRYT ACNASDKIIEPIQSRCAVLRYTKLTDAQIL K I I S R C 0 1 0 0 0 1 1 0 0 3 0 0 0 0 1 1 0 0 0 0 0 0 8 0 954.54983 P35250 P35250 177 184 RFC2 Replication factor C subunit 2 yes yes 2 0.050519 82.279 By MS/MS 7 0 1 1 706010 706010 0 6417 817 6616 15823 12822 12822 1 11083 0 IIEQVLER MAYVFGGAYVPLSCRIIEQVLERRSWQGLD YVPLSCRIIEQVLERRSWQGLDEVVRLLNC R I I E R R 0 1 0 0 0 1 2 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 8 0 998.57605 Q9H267 Q9H267 524 531 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 2 0.016064 104.01 By MS/MS 5 0 1 1 562820 562820 0 6418 2426 6617 15824 12823 12823 1 5644.8 0 IIEREEK VTVRRDPTLLVSVVRIIEREEKIDRRILDR TLLVSVVRIIEREEKIDRRILDRKKQTGFV R I I E K I 0 1 0 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 7 1 915.50255 O60645 O60645 215 221 EXOC3 Exocyst complex component 3 yes yes 2 0.052865 127.12 By MS/MS 4.5 0.5 1 1 2 668220 668220 0 6419 267 6618 15825;15826 12824 12824 1 23620 0 IIETLTQQLQAK EVLPALENNKEQIQKIIETLTQQLQAKGKE IQKIIETLTQQLQAKGKELNEFREKHNIRL K I I A K G 1 0 0 0 0 3 1 0 0 2 2 1 0 0 0 0 2 0 0 0 0 0 12 0 1384.7926 Q9UHV9 Q9UHV9 100 111 PFDN2 Prefoldin subunit 2 yes yes 2 8.1079E-45 335.87 By MS/MS 9.5 0.5 1 1 2 4081000 4081000 0 6420 2732 6619 15827;15828 12825;12826 12826 2 107970 0 IIEVGDTPK IVTSGLIMQLLAGAKIIEVGDTPKDRALFN LLAGAKIIEVGDTPKDRALFNGAQKLFGMI K I I P K D 0 0 0 1 0 0 1 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 9 0 970.53351 P61619 P61619 99 107 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 2 0.025226 86.67 By MS/MS 1.5 0.5 1 1 2 1568600 1568600 0 6421 1127 6620 15829;15830 12827 12827 1 440320 0 IIEVGDTPKDR IVTSGLIMQLLAGAKIIEVGDTPKDRALFN AGAKIIEVGDTPKDRALFNGAQKLFGMIIT K I I D R A 0 1 0 2 0 0 1 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1241.6616 P61619 P61619 99 109 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 2 0.028176 102.06 By MS/MS 2 0.816 1 1 1 3 616040 616040 0 6422 1127 6621 15831;15832;15833 12828;12829 12829 2 143660 0 IIGATDSSGELMFLMK ADKPRGFARGLDPERIIGATDSSGELMFLM IGATDSSGELMFLMKWKDSDEADLVLAKEA R I I M K W 1 0 0 1 0 0 1 2 0 2 2 1 2 1 0 2 1 0 0 0 0 0 16 0 1711.8525 P83916;Q13185 Q13185 126 141 CBX1;CBX3 Chromobox protein homolog 1;Chromobox protein homolog 3 no no 2 0.00019444 167.84 By MS/MS 9.33 0.471 2 1 3 851810 851810 0 6423 1362;1243 6622;6623 15834;15835;15836 12830;12831 12830 749;750 2 18606 0 IIGELNKENDR IPVPVGISVTDENGKIIGELNKENDRILVA ENGKIIGELNKENDRILVAQGGLGGKLLTN K I I D R I 0 1 2 1 0 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1299.6783 A4D1E9 A4D1E9 105 115 GTPBP10 GTP-binding protein 10 yes yes 2 0.0019261 133.75 By MS/MS 7 0 1 1 721120 721120 0 6424 15 6624 15837 12832 12832 1 11320 0 IIGLKPEGVPR GYSQGNPCILVKMNRIIGLKPEGVPRIDCV KMNRIIGLKPEGVPRIDCVSKNEDIPNVAV R I I P R I 0 1 0 0 0 0 1 2 0 2 1 1 0 0 2 0 0 0 0 1 0 0 11 1 1177.7183 P54709 P54709 178 188 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 3 0.028148 72.848 By MS/MS 7.5 0.5 1 1 2 1913700 1913700 0 6425 1047 6625 15838;15839 12833 12833 1 28762 0 IIHEDGYSEDECKQYK GAGESGKSTIVKQMKIIHEDGYSEDECKQY IHEDGYSEDECKQYKVVVYSNTIQSIIAII K I I Y K V 0 0 0 2 1 1 3 1 1 2 0 2 0 0 0 1 0 0 2 0 0 0 16 1 2012.8786 P08754 P08754 55 70 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 3 0.0045903 94.717 By MS/MS 7 0 1 1 490150 490150 0 6426 528 6626 15840 12834 12834 1 7694.5 0 IIIAEVVNK KNPKYKKLKDAIEEKIIIAEVVNKINRANG DAIEEKIIIAEVVNKINRANGKSTSRIFLL K I I N K I 1 0 1 0 0 0 1 0 0 3 0 1 0 0 0 0 0 0 0 2 0 0 9 0 997.61718 O43795 O43795 987 995 MYO1B Unconventional myosin-Ib yes yes 2 0.0031858 112.41 By MS/MS 3.5 0.5 1 1 2 2325500 2325500 0 6427 235 6627 15841;15842 12835 12835 1 131150 0 IIKDGEQHEDLNEVAK IVLWNIFNRMPIARKIIKDGEQHEDLNEVA IKDGEQHEDLNEVAKLFNIHED________ K I I A K L 1 0 1 2 0 1 3 1 1 2 1 2 0 0 0 0 0 0 0 1 0 0 16 1 1836.9218 O95831 O95831 591 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3;4 0.00077029 115.1 By MS/MS 5.4 0.49 3 2 5 11969000 11969000 0 6428 429 6628 15843;15844;15845;15846;15847 12836;12837;12838 12836 3 116800 0 IILDLISESPIK VLIGGKPDRVVECIKIILDLISESPIKGRA CIKIILDLISESPIKGRAQPYDPNFYDETY K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 P61978 P61978 208 219 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 2.2853E-12 227.27 By MS/MS 6.5 1.12 1 1 1 1 4 2746000 2746000 0 6429 1135 6629 15848;15849;15850;15851 12839;12840;12841 12840 3 20715 0 IILDNLQAK ERFSGAVRRQVHSLRIILDNLQAKGKERQW QVHSLRIILDNLQAKGKERQWLRHQATGEL R I I A K G 1 0 1 1 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1026.6073 A3KMH1 A3KMH1 1656 1664 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.050678 76.1 By MS/MS 2.5 0.5 1 1 2 1100800 1100800 0 6430 14 6630 15852;15853 12842 12842 1 344130 0 IILLAEGR IKPQVDRYRLKNGRRIILLAEGRLVNLGCA RLKNGRRIILLAEGRLVNLGCAMGHPSFVM R I I G R L 1 1 0 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 8 0 883.5491 P23526 P23526 336 343 AHCY Adenosylhomocysteinase yes yes 2 0.0022304 140.98 By MS/MS By matching 7.75 0.829 2 1 1 3 1 7367200 7291400 75800 6431 706 6631 15854;15855;15856;15857 12843 12843 1 114180 136510 IILLKPIIK CIETLRKALSEFGSKIILLKPIIKVLPKLF SEFGSKIILLKPIIKVLPKLFESREKAVRD K I I I K V 0 0 0 0 0 0 0 0 0 4 2 2 0 0 1 0 0 0 0 0 0 0 9 1 1049.7576 Q14008 Q14008 159 167 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.017888 111.65 By MS/MS 2 0 1 1 464930 464930 0 6432 1417 6632 15858 12844 12844 1 157260 0 IILNALVAQQK PFLTNVTLPRSGATKIILNALVAQQKNGSP GATKIILNALVAQQKNGSPAGGDAKELDSK K I I Q K N 2 0 1 0 0 2 0 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1209.7445 Q92604 Q92604 220 230 LPGAT1 Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 yes yes 2 1.043E-10 225.4 By MS/MS 7 0 1 1 1425900 1425900 0 6433 2061 6633 15859 12845 12845 1 22384 0 IILPPEKELAMPGEDLK FMPVMFSLTWDMACRIILPPEKELAMPGED LPPEKELAMPGEDLKFNLILRQPMILEKGQ R I I L K F 1 0 0 1 0 0 3 1 0 2 3 2 1 0 3 0 0 0 0 0 0 0 17 1 1892.0329 P49411 P49411 389 405 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.023201 74.966 By MS/MS 7 0 1 1 1525300 1525300 0 6434 949 6634 15860 12846 12846 522 1 23945 0 IINAFFPEGEDQVNFR FQRIPELAINPLGDRIINAFFPEGEDQVNF INAFFPEGEDQVNFRGFMRTLAHFRPIEDN R I I F R G 1 1 2 1 0 1 2 1 0 2 0 0 0 3 1 0 0 0 0 1 0 0 16 0 1894.9214 Q99653 Q99653 66 81 CHP1 Calcineurin B homologous protein 1 yes yes 2 8.2715E-05 189.24 By MS/MS 8.5 0.5 1 1 2 303100 303100 0 6435 2257 6635 15861;15862 12847;12848;12849;12850 12847 4 4689.2 0 IINDNATYCR RVREWYGYHFPELVKIINDNATYCRLAQFI PELVKIINDNATYCRLAQFIGNRRELNEDK K I I C R L 1 1 2 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 10 0 1238.5714 O00567 O00567 203 212 NOP56 Nucleolar protein 56 yes yes 2 0.038789 81.95 By MS/MS 5 0 1 1 251680 251680 0 6436 115 6636 15863 12851 12851 1 2524.2 0 IINEPTAAAIAYGLDK ATKDAGTIAGLNVMRIINEPTAAAIAYGLD INEPTAAAIAYGLDKREGEKNILVFDLGGG R I I D K R 4 0 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 0 16 0 1658.8879 P11021;P11142;P54652 P11021 198 213 HSPA5;HSPA8;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 2;3 4.7397E-12 247.17 By MS/MS By MS/MS 5.71 1.28 1 3 1 1 1 6 1 52310000 52124000 185880 6437 571;572 6637 15864;15865;15866;15867;15868;15869;15870 12852;12853;12854;12855;12856;12857;12858;12859 12855 8 558770 156100 IINEPTAAAIAYGLDKK ATKDAGTIAGLNVLRIINEPTAAAIAYGLD NEPTAAAIAYGLDKKVGAERNVLIFDLGGG R I I K K V 4 0 1 1 0 0 1 1 0 3 1 2 0 0 1 0 1 0 1 0 0 0 17 1 1786.9829 P11142;P54652 P11142 172 188 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.00083101 172.09 By MS/MS By MS/MS 5.33 0.471 4 2 5 1 261890000 261850000 41990 6438 572 6638 15871;15872;15873;15874;15875;15876 12860;12861;12862;12863;12864;12865 12863 6 2573200 35263 IINEPTAAAIAYGLDKR ATKDAGTIAGLNVMRIINEPTAAAIAYGLD NEPTAAAIAYGLDKREGEKNILVFDLGGGT R I I K R E 4 1 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 0 17 1 1814.989 P11021 P11021 198 214 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.0013642 163.9 By MS/MS 5.83 1.34 1 2 1 1 1 6 17931000 17931000 0 6439 571 6639 15877;15878;15879;15880;15881;15882 12866;12867;12868;12869 12867 4 240990 0 IINEPTAAAIAYGLDR ATKDAGVIAGLNVLRIINEPTAAAIAYGLD INEPTAAAIAYGLDRTGKGERNVLIFDLGG R I I D R T 4 1 1 1 0 0 1 1 0 3 1 0 0 0 1 0 1 0 1 0 0 0 16 0 1686.8941 P0DMV9;P0DMV8;P17066 P0DMV9 172 187 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2;3 3.432E-08 242.41 By MS/MS By MS/MS 6 1.53 1 6 1 1 2 1 10 2 131650000 131410000 238410 6440 550;639 6640 15883;15884;15885;15886;15887;15888;15889;15890;15891;15892;15893;15894 12870;12871;12872;12873;12874;12875;12876;12877;12878;12879;12880;12881 12877 12 1332700 200220 IINPMGLLVEELK LITQMTGKELFEMWKIINPMGLLVEELKKR WKIINPMGLLVEELKKRNVSAPESRLTRQS K I I L K K 0 0 1 0 0 0 2 1 0 2 3 1 1 0 1 0 0 0 0 1 0 0 13 0 1467.8371 Q9H9J2 Q9H9J2 234 246 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.043739 70.728 By MS/MS 8 0 1 1 170940 170940 0 6441 2487 6641 15895 12882 12882 1104 1 2158.2 0 IIPGADADVVVWDPEATK SNAAKLLNLYPRKGRIIPGADADVVVWDPE GADADVVVWDPEATKTISASTQVQGGDFNL R I I T K T 3 0 0 3 0 0 1 1 0 2 0 1 0 0 2 0 1 1 0 3 0 0 18 0 1894.9676 Q9BPU6 Q9BPU6 394 411 DPYSL5 Dihydropyrimidinase-related protein 5 yes yes 2 0.00057818 126.09 By MS/MS 6 0 1 1 932190 932190 0 6442 2277 6642 15896 12883 12883 1 6408.1 0 IIPGFMCQGGDFTR TGEKGFGYKGSCFHRIIPGFMCQGGDFTRH RIIPGFMCQGGDFTRHNGTGGKSIYGEKFE R I I T R H 0 1 0 1 1 1 0 3 0 2 0 0 1 2 1 0 1 0 0 0 0 0 14 0 1597.7381 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 56 69 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.0014292 99.539 By MS/MS 10 0 1 1 343140 343140 0 6443 1188 6643 15897 12884 12884 1 18494 0 IIPYLSFGEVEK TFVRSNPSVLQGLLRIIPYLSFGEVEKMQI LLRIIPYLSFGEVEKMQILVERFKPYCNFD R I I E K M 0 0 0 0 0 0 2 1 0 2 1 1 0 1 1 1 0 0 1 1 0 0 12 0 1393.7493 Q5T4S7 Q5T4S7 4619 4630 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.0018907 109.83 By MS/MS 4.5 0.5 1 1 2 259770 259770 0 6444 1633 6644 15898;15899 12885 12885 1 16410 0 IIQDLSDSCFGFLK SQSSFSACVPSLSSKIIQDLSDSCFGFLKS KIIQDLSDSCFGFLKSALEVPRLYRRTNKE K I I L K S 0 0 0 2 1 1 0 1 0 2 2 1 0 2 0 2 0 0 0 0 0 0 14 0 1641.8072 Q14746 Q14746 571 584 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 2 9.0977E-06 219.74 By MS/MS 5 0 1 1 276390 276390 0 6445 1457 6645 15900 12886 12886 1 2772 0 IIQINTDSLVQEK ETEQEMEEWLITLKKIIQINTDSLVQEKKE KKIIQINTDSLVQEKKETVETAQDDETSSQ K I I E K K 0 0 1 1 0 2 1 0 0 3 1 1 0 0 0 1 1 0 0 1 0 0 13 0 1499.8195 Q5JSL3 Q5JSL3 270 282 DOCK11 Dedicator of cytokinesis protein 11 yes yes 2 2.8037E-05 146.11 By MS/MS 2 0 1 1 134550 134550 0 6446 1608 6646 15901 12887 12887 0 45511 0 IIQLLDDYPK PREDRATWKSNYFLKIIQLLDDYPKCFIVG NYFLKIIQLLDDYPKCFIVGADNVGSKQMQ K I I P K C 0 0 0 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1216.6703 P05388;Q8NHW5 P05388 17 26 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2 2.6537E-05 163.64 By MS/MS 7.5 0.5 1 1 2 3847900 3847900 0 6447 491 6647 15902;15903 12888 12888 1 59429 0 IIQTPGLWESENQNK TCDGVQCAFEELVEKIIQTPGLWESENQNK IIQTPGLWESENQNKGVKLSHREEGQGGGA K I I N K G 0 0 2 0 0 2 2 1 0 2 1 1 0 0 1 1 1 1 0 0 0 0 15 0 1755.8792 Q9NP72 Q9NP72 169 183 RAB18 Ras-related protein Rab-18 yes yes 2 3.0352E-07 231.74 By MS/MS 9 0 1 1 660300 660300 0 6448 2524 6648 15904 12889;12890 12889 2 12995 0 IIQVGNR PFRSPSWYGIPRLEKIIQVGNRIKFVIKRP YGIPRLEKIIQVGNRIKFVIKRPELLTHST K I I N R I 0 1 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 7 0 798.47119 P78347 P78347 527 533 GTF2I General transcription factor II-I yes yes 2 0.015102 122.15 By MS/MS 4 0.816 1 1 1 3 2902100 2902100 0 6449 1221 6649 15905;15906;15907 12891 12891 1 95779 0 IIRPSETAGR PVARYFGIKRGQVVKIIRPSETAGRYITYR GQVVKIIRPSETAGRYITYRLVQ_______ K I I G R Y 1 2 0 0 0 0 1 1 0 2 0 0 0 0 1 1 1 0 0 0 0 0 10 1 1098.6146 P19388 P19388 193 202 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 0.025564 105.2 By MS/MS 8 0 1 1 2110100 2110100 0 6450 661 6650 15908 12892 12892 1 26640 0 IIRQEPSDSPMFIINR DADEPNNLNSKIAFKIIRQEPSDSPMFIIN IRQEPSDSPMFIINRNTGEIRTMNNFLDRE K I I N R N 0 2 1 1 0 1 1 0 0 4 0 0 1 1 2 2 0 0 0 0 0 0 16 1 1914.9986 Q02413 Q02413 198 213 DSG1 Desmoglein-1 yes yes 3 1.3465E-15 209.79 By matching By MS/MS 3.5 0.5 1 1 1 1 1552900 622650 930230 6451 1277 6651 15909;15910 12893 12893 762 1 58595 118400 IISANGCKVDNSSLTGESEPQTR LVEVKGGDRIPADLRIISANGCKVDNSSLT VDNSSLTGESEPQTRSPDFTNENPLETRNI R I I T R S 1 1 2 1 1 1 2 2 0 2 1 1 0 0 1 4 2 0 0 1 0 0 23 1 2462.1707 P05023 P05023 205 227 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 5.991E-07 118.32 By MS/MS 2.5 1.12 1 1 1 1 4 1689100 1689100 0 6452 481 6652 15911;15912;15913;15914 12894;12895;12896;12897 12896 4 219140 0 IISNASCTTNCLAPLAK FVMGVNHEKYDNSLKIISNASCTTNCLAPL SNASCTTNCLAPLAKVIHDNFGIVEGLMTT K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 2.8799E-06 165.78 By MS/MS By MS/MS 6.33 2.83 1 1 1 2 2 1 1 4 5 19019000 18552000 467270 6453 473 6653 15915;15916;15917;15918;15919;15920;15921;15922;15923 12898;12899;12900;12901;12902 12899 5 289470 317570 IISNVPADSLIR FLPHKYDVKLQNEDKIISNVPADSLIRTER EDKIISNVPADSLIRTERPPNKEIVRYFIR K I I I R T 1 1 1 1 0 0 0 0 0 3 1 0 0 0 1 2 0 0 0 1 0 0 12 0 1296.7402 Q9UIG0 Q9UIG0 232 243 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.0023629 111.27 By MS/MS 2 0 1 1 541290 541290 0 6454 2742 6654 15924 12903 12903 1 183090 0 IISTTASKTETPIVSK LPAENDKPHDVEINKIISTTASKTETPIVS ISTTASKTETPIVSKSLSSSLDDTEVKKVM K I I S K S 1 0 0 0 0 0 1 0 0 3 0 2 0 0 1 3 4 0 0 1 0 0 16 1 1674.9404 O95292 O95292 140 155 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2;3 3.7043E-10 217.46 By MS/MS 8 0 2 2 3930100 3930100 0 6455 401 6655 15925;15926 12904;12905 12905 2 49618 0 IITEGFEAAKEK LKQADLYISEGLHPRIITEGFEAAKEKALQ HPRIITEGFEAAKEKALQFLEEVKVSREMD R I I E K A 2 0 0 0 0 0 3 1 0 2 0 2 0 1 0 0 1 0 0 0 0 0 12 1 1334.7082 P40227 P40227 118 129 CCT6A T-complex protein 1 subunit zeta yes yes 2 1.0662E-17 266.17 By MS/MS 5.67 2.66 1 1 1 1 1 2 2 1 1 1 12 104110000 104110000 0 6456 858 6656 15927;15928;15929;15930;15931;15932;15933;15934;15935;15936;15937;15938 12906;12907;12908;12909;12910;12911;12912 12910 7 1022100 0 IITHPNFNGNTLDNDIMLIK IDVLEGNEQFINAAKIITHPNFNGNTLDND NFNGNTLDNDIMLIKLSSPATLNSRVATVS K I I I K L 0 0 4 2 0 0 0 1 1 4 2 1 1 1 1 0 2 0 0 0 0 0 20 0 2282.1729 CON__P00761 CON__P00761 78 97 yes yes 2;3 4.8065E-17 187 By MS/MS By MS/MS 6.24 2.65 2 3 3 3 5 5 6 4 6 5 22 20 207110000 172810000 34303000 + 6457 37 6657;6658 15939;15940;15941;15942;15943;15944;15945;15946;15947;15948;15949;15950;15951;15952;15953;15954;15955;15956;15957;15958;15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970;15971;15972;15973;15974;15975;15976;15977;15978;15979;15980 12913;12914;12915;12916;12917;12918;12919;12920;12921;12922;12923;12924;12925;12926;12927;12928;12929;12930;12931;12932;12933;12934;12935;12936;12937;12938;12939;12940;12941;12942;12943;12944;12945;12946;12947;12948;12949;12950;12951;12952;12953;12954;12955;12956;12957;12958;12959;12960;12961;12962;12963;12964;12965;12966;12967 12916 15 55 3183700 53508000 IITIPAALQQVK DWDYYIERLGSAIQKIITIPAALQQVKNPV IQKIITIPAALQQVKNPVPRVKHPDWLHKK K I I V K N 2 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1293.802 Q07864 Q07864 1144 1155 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.0081353 94.409 By MS/MS 2 0 1 1 75243 75243 0 6458 1302 6659 15981 12968 12968 1 25450 0 IITLAGPTNAIFK SGARINISEGNCPERIITLAGPTNAIFKAF ERIITLAGPTNAIFKAFAMIIDKLEEDISS R I I F K A 2 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 2 0 0 0 0 0 13 0 1357.7969 Q15366 Q15366 58 70 PCBP2 Poly(rC)-binding protein 2 yes yes 2 9.909E-05 173.64 By MS/MS 8 0 1 1 928580 928580 0 6459 1501 6660 15982 12969;12970 12969 2 11723 0 IITLEEGDIILTGTPK SMIFSIPYIISYVSKIITLEEGDIILTGTP ITLEEGDIILTGTPKGVGPVKENDEIEAGI K I I P K G 0 0 0 1 0 0 2 2 0 4 2 1 0 0 1 0 3 0 0 0 0 0 16 0 1711.9608 Q6P587 Q6P587 179 194 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2 6.4151E-17 263.74 By MS/MS 8.5 0.5 1 1 2 270830 270830 0 6460 1712 6661 15983;15984 12971 12971 1 4311.4 0 IITLTGPTNAIFK SGARINISEGNCPERIITLTGPTNAIFKAF ERIITLTGPTNAIFKAFAMIIDKLEEDINS R I I F K A 1 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 3 0 0 0 0 0 13 0 1387.8075 Q15365 Q15365 58 70 PCBP1 Poly(rC)-binding protein 1 yes yes 2 5.8121E-06 199.33 By MS/MS 7.5 0.5 1 1 2 4709600 4709600 0 6461 1500 6662 15985;15986 12972;12973;12974 12973 3 72976 0 IIVACIETLR VQEELLKGLDNKNPKIIVACIETLRKALSE NKNPKIIVACIETLRKALSEFGSKIILLKP K I I L R K 1 1 0 0 1 0 1 0 0 3 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1186.6744 Q14008 Q14008 140 149 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 3.3204E-05 159.28 By MS/MS 2 0 1 1 535380 535380 0 6462 1417 6663 15987 12975 12975 1 181090 0 IIVAIDGWPR IRIETRQASTLEGRRIIVAIDGWPRNSRYP LEGRRIIVAIDGWPRNSRYPNGHFVRNLGD R I I P R N 1 1 0 1 0 0 0 1 0 3 0 0 0 0 1 0 0 1 0 1 0 0 10 0 1138.6499 Q9Y2L1 Q9Y2L1 398 407 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0014095 125.16 By MS/MS 4 0 1 1 229840 229840 0 6463 2834 6664 15988 12976 12976 1 21629 0 IIVDELK AATGPSIKIWDLEGKIIVDELKQEVISTSS KIWDLEGKIIVDELKQEVISTSSKAEPPQC K I I L K Q 0 0 0 1 0 0 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 7 0 828.49567 P63244 P63244 265 271 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.047397 91.626 By MS/MS By matching 8 0 2 1 1 5744800 5617600 127220 6464 1202 6665 15989;15990 12977 12977 1 70921 171670 IIVDELKQEVISTSSK AATGPSIKIWDLEGKIIVDELKQEVISTSS IVDELKQEVISTSSKAEPPQCTSLAWSADG K I I S K A 0 0 0 1 0 1 2 0 0 3 1 2 0 0 0 3 1 0 0 2 0 0 16 1 1787.988 P63244 P63244 265 280 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2;3 7.1043E-30 271.04 By MS/MS By MS/MS 8.29 0.881 1 4 1 1 5 2 175930000 175540000 389380 6465 1202 6666 15991;15992;15993;15994;15995;15996;15997 12978;12979;12980;12981;12982;12983 12979 6 2246500 525450 IIVHTVQSQDR RPSDHSYSDSTEMVKIIVHTVQSQDRVLKE EMVKIIVHTVQSQDRVLKELFGHLSKLLGC K I I D R V 0 1 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 0 0 2 0 0 11 0 1294.6993 O15111 O15111 589 599 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 2;3 0.00014865 140.17 By MS/MS 5 0 2 2 1122700 1122700 0 6466 160 6667 15998;15999 12984;12985 12984 2 11260 0 IIVLGLLPR EAIVQLINTRQPQAKIIVLGLLPRGEKPNP RQPQAKIIVLGLLPRGEKPNPLRQKNAKVN K I I P R G 0 1 0 0 0 0 0 1 0 2 3 0 0 0 1 0 0 0 0 1 0 0 9 0 992.67464 P68402 P68402 134 142 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes yes 2 0.00076344 138.62 By MS/MS 8 0 1 1 59118 59118 0 6467 1214 6668 16000 12986 12986 1 746.36 0 IIYGGSVTGATCK WLKSNVSDAVAQSTRIIYGGSVTGATCKEL TRIIYGGSVTGATCKELASQPDVDGFLVGG R I I C K E 1 0 0 0 1 0 0 3 0 2 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1325.6649 P60174 P60174 207 219 TPI1 Triosephosphate isomerase yes yes 2 0.0017726 126.03 By MS/MS By matching 8 0 2 1 1 861930 820500 41427 6468 1089 6669 16001;16002 12987 12987 0 10359 55904 IIYIAPMR KHINMDGTINVDDFKIIYIAPMRSLVQEMV INVDDFKIIYIAPMRSLVQEMVGSFGKRLA K I I M R S 1 1 0 0 0 0 0 0 0 3 0 0 1 0 1 0 0 0 1 0 0 0 8 0 975.55756 O75643 O75643 538 545 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.022487 96.048 By MS/MS 1.5 0.5 1 1 2 545120 545120 0 6469 340 6670 16003;16004 12988 12988 140 1 167320 0 IKANVAHTK TNDTIGSVRRCILNRIKANVAHTKIELFVG RCILNRIKANVAHTKIELFVGGELIDPADD R I K T K I 2 0 1 0 0 0 0 0 1 1 0 2 0 0 0 0 1 0 0 1 0 0 9 1 980.57671 Q93008 Q93008 923 931 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0058732 131.62 By MS/MS 2.5 0.5 1 1 2 283590 283590 0 6470 2085 6671 16005;16006 12989 12989 1 75249 0 IKAQDEAFALQDVPLSSVVR VAGLVTLKHVYEIARIKAQDEAFALQDVPL EAFALQDVPLSSVVRSIIGSARSLGIRVVK R I K V R S 3 1 0 2 0 2 1 0 0 1 2 1 0 1 1 2 0 0 0 3 0 0 20 1 2185.1743 Q9Y3B7 Q9Y3B7 123 142 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 1.4542E-05 167.95 By MS/MS 9 0 1 1 894460 894460 0 6471 2866 6672 16007 12990 12990 1 17603 0 IKDLSTVEALQNLK EKCPNLTYLNLSGNKIKDLSTVEALQNLKN KIKDLSTVEALQNLKNLKSLDLFNCEITNL K I K L K N 1 0 1 1 0 1 1 0 0 1 3 2 0 0 0 1 1 0 0 1 0 0 14 1 1570.893 Q9BTT0 Q9BTT0 100 113 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 2;3 1.3184E-06 234.87 By MS/MS 8 0 2 2 5135700 5135700 0 6472 2317 6673 16008;16009 12991;12992 12992 2 64837 0 IKDYDANFK ERMKKTMASQVSIRRIKDYDANFKIKDFPE QVSIRRIKDYDANFKIKDFPEKAKDIFIEA R I K F K I 1 0 1 2 0 0 0 0 0 1 0 2 0 1 0 0 0 0 1 0 0 0 9 1 1112.5502 Q9BRJ2 Q9BRJ2 125 133 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2;3 0.0040802 112.3 By MS/MS 8 0 2 2 4107600 4107600 0 6473 2295 6674 16010;16011 12993;12994 12994 2 51859 0 IKEGVEEAAK KESLHEVSKSDLGRKIKEGVEEAAKTAKQS DLGRKIKEGVEEAAKTAKQSAESVSKGGEK K I K A K T 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1072.5764 O43615 O43615 145 154 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 0.0071705 114.89 By MS/MS 7 0 2 2 2754000 2754000 0 6474 221 6675 16012;16013 12995;12996 12995 2 43233 0 IKEGVEEAAKTAK KESLHEVSKSDLGRKIKEGVEEAAKTAKQS RKIKEGVEEAAKTAKQSAESVSKGGEKLGR K I K A K Q 3 0 0 0 0 0 3 1 0 1 0 3 0 0 0 0 1 0 0 1 0 0 13 2 1372.7562 O43615 O43615 145 157 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.050901 93.228 By MS/MS 7 0 1 1 856370 856370 0 6475 221 6676 16014 12997 12997 1 13443 0 IKELDHNISK EVAKHKEQNNDSQLKIKELDHNISKHKREA DSQLKIKELDHNISKHKREAEDGAAKVSKM K I K S K H 0 0 1 1 0 0 1 0 1 2 1 2 0 0 0 1 0 0 0 0 0 0 10 1 1195.6561 O95347 O95347 910 919 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.011481 87.713 By MS/MS 3 0 1 1 794510 794510 0 6476 405 6677 16015 12998 12998 1 14537 0 IKENKGEER SASLCAATLAAVLQRIKENKGEERLRSTIG AAVLQRIKENKGEERLRSTIGVDGSVYKKH R I K E R L 0 1 1 0 0 0 3 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1101.5778 P52789 P52789 397 405 HK2 Hexokinase-2 yes yes 2 0.015778 120.31 By MS/MS 4 0 1 1 54900 54900 0 6477 1023 6678 16016 12999 12999 1 5166.4 0 IKETVDQVEELRR ELEEQQMHLNVGLRKIKETVDQVEELRRDL RKIKETVDQVEELRRDLRIKSQELEVKNAA K I K R R D 0 2 0 1 0 1 3 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 13 2 1613.8737 Q14204 Q14204 3208 3220 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;4 0.040667 99.752 By MS/MS 1.8 0.748 2 2 1 5 1094000 1094000 0 6478 1433 6679 16017;16018;16019;16020;16021 13000;13001 13000 2 286450 0 IKEWYEK KVRALEESNYELEGKIKEWYEKHGNSHQGE SNYELEGKIKEWYEKHGNSHQGEPRDYSKY K I K E K H 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 7 1 994.51238 CON__P13645;P13645;CON__P02535-1 CON__P13645 178 184 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.021838 137.9 By MS/MS By MS/MS 5.26 2.81 2 2 2 2 2 3 1 2 1 2 11 8 50303000 25570000 24732000 + 6479 50 6680 16022;16023;16024;16025;16026;16027;16028;16029;16030;16031;16032;16033;16034;16035;16036;16037;16038;16039;16040 13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018 13018 17 1293000 5425500 IKFDQSVDPEIIAR DVKGRTEILKWYLNKIKFDQSVDPEIIARG KIKFDQSVDPEIIARGTVGFSGAELENLVN K I K A R G 1 1 0 2 0 1 1 0 0 3 0 1 0 1 1 1 0 0 0 1 0 0 14 1 1629.8726 Q96TA2 Q96TA2 523 536 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 0.027708 101.72 By MS/MS 6 0 2 2 6180000 6180000 0 6480 2241 6681 16041;16042 13019;13020 13019 2 42483 0 IKFEMEQNLR LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA LDDFRIKFEMEQNLRQGVDADINGLRQVLD R I K L R Q 0 1 1 0 0 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 10 1 1306.6704 P35527;CON__P35527 P35527 241 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 0.00065426 169.65 By MS/MS By MS/MS 4.26 2.54 6 4 7 6 4 5 1 1 2 2 20 18 105760000 70693000 35065000 + 6481 822 6682;6683 16043;16044;16045;16046;16047;16048;16049;16050;16051;16052;16053;16054;16055;16056;16057;16058;16059;16060;16061;16062;16063;16064;16065;16066;16067;16068;16069;16070;16071;16072;16073;16074;16075;16076;16077;16078;16079;16080 13021;13022;13023;13024;13025;13026;13027;13028;13029;13030;13031;13032;13033;13034;13035;13036;13037;13038;13039;13040;13041;13042;13043;13044;13045;13046;13047;13048;13049 13049 404 29 5692600 14488000 IKFKESFAEMNR SWSSLSMDEKVELYRIKFKESFAEMNRGSN LYRIKFKESFAEMNRGSNEWKTVVGGAMFF R I K N R G 1 1 1 0 0 0 2 0 0 1 0 2 1 2 0 1 0 0 0 0 0 0 12 2 1498.7602 P13073 P13073 84 95 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.02421 86.262 By MS/MS 10 0 1 1 583030 583030 0 6482 598 6684 16081 13050 13050 279 1 31423 0 IKGCTDNLTLTVAR GENTSNMTHLEAQNRIKGCTDNLTLTVARS RIKGCTDNLTLTVARSEHKVWSPLVTEEGK R I K A R S 1 1 1 1 1 0 0 1 0 1 2 1 0 0 0 0 3 0 0 1 0 0 14 1 1560.8294 O00151 O00151 70 83 PDLIM1 PDZ and LIM domain protein 1 yes yes 3 0.034031 90.759 By MS/MS 7 0 1 1 0 0 0 6483 84 6685 16082 13051 13051 1 0 0 IKGEELSEANVR EDRETVIKELKKSLKIKGEELSEANVRLSL SLKIKGEELSEANVRLSLLEKKLDSAAKDA K I K V R L 1 1 1 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 1 1343.7045 Q14203 Q14203 961 972 DCTN1 Dynactin subunit 1 yes yes 2;3 0.0014267 144.7 By MS/MS 3 0 2 2 2445100 2445100 0 6484 1432 6686 16083;16084 13052;13053 13053 2 44739 0 IKGEHPGLSIGDVAK PPSAFFLFCSEYRPKIKGEHPGLSIGDVAK IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ K I K A K K 1 0 0 1 0 0 1 3 1 2 1 2 0 0 1 1 0 0 0 1 0 0 15 1 1519.8358 P09429;B2RPK0 P09429 113 127 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 3 0.0087145 87.99 By MS/MS 8 0 1 1 2719100 2719100 0 6485 535 6687 16085 13054 13054 1 34329 0 IKGSEADRQR RHGNQYIQVNEPWKRIKGSEADRQRAGTVT EPWKRIKGSEADRQRAGTVTGLAVNIAALL R I K Q R A 1 2 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 10 2 1158.6105 P56192 P56192 728 737 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.00023486 163.15 By MS/MS 4 0 1 1 1192300 1192300 0 6486 1067 6688 16086 13055 13055 1 112200 0 IKHLPYTTR LYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ PRHLFRIKHLPYTTRRDSVLQMWRGMLNPG R I K T R R 0 1 0 0 0 0 0 0 1 1 1 1 0 0 1 0 2 0 1 0 0 0 9 1 1127.6451 Q53S58 Q53S58 286 294 TMEM177 Transmembrane protein 177 yes yes 3 0.026461 79.489 By MS/MS 8 0 1 1 858280 858280 0 6487 1592 6689 16087 13056 13056 1 10836 0 IKLHQEDNDYINASLIK NRNRYRDVSPFDHSRIKLHQEDNDYINASL LHQEDNDYINASLIKMEEAQRSYILTQGPL R I K I K M 1 0 2 2 0 1 1 0 1 3 2 2 0 0 0 1 0 0 1 0 0 0 17 1 2013.0531 P18031 P18031 57 73 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 3 0.00028854 151.11 By MS/MS 6 0 1 1 4552200 4552200 0 6488 649 6690 16088 13057 13057 1 31293 0 IKNEVDSTLTFR DLNKCGPMVLDALIKIKNEVDSTLTFRRSC LIKIKNEVDSTLTFRRSCREGICGSCAMNI K I K F R R 0 1 1 1 0 0 1 0 0 1 1 1 0 1 0 1 2 0 0 1 0 0 12 1 1421.7514 P21912 P21912 79 90 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2;3 0.00026774 160.22 By MS/MS 8 0 2 2 3445900 3445900 0 6489 683 6691 16089;16090 13058;13059 13059 2 43504 0 IKNVVHELR TDAPQVSHKPGGEPKIKNVVHELRITNQVI PGGEPKIKNVVHELRITNQVIYLNPPIEEC K I K L R I 0 1 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 9 1 1106.656 Q14204 Q14204 955 963 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.03975 70.399 By MS/MS 2 0.816 1 1 1 3 1736400 1736400 0 6490 1433 6692 16091;16092;16093 13060;13061 13061 2 442780 0 IKPVLMMNK CVQTETVLRQAIAERIKPVLMMNKMDRALL QAIAERIKPVLMMNKMDRALLELQLEPEEL R I K N K M 0 0 1 0 0 0 0 0 0 1 1 2 2 0 1 0 0 0 0 1 0 0 9 1 1072.6137 P13639 P13639 151 159 EEF2 Elongation factor 2 yes yes 3 0.049705 51.949 By MS/MS 4 0 1 1 651260 651260 0 6491 602 6693 16094 13062 13062 286;287 1 61288 0 IKQEILPEER SDRRTGKPIAVKLVKIKQEILPEERMNGQV VKLVKIKQEILPEERMNGQVVCAVPHNLES K I K E R M 0 1 0 0 0 1 3 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1253.698 O75534 O75534 90 99 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.006674 125.68 By MS/MS 6 1.41 1 1 1 1 1 5 5851600 5851600 0 6492 333 6694 16095;16096;16097;16098;16099 13063;13064 13063 2 377740 0 IKQHEGLATFYR LVPALEAFGLEGVFRIKQHEGLATFYRKSK VFRIKQHEGLATFYRKSKFSLLSQHDISFY R I K Y R K 1 1 0 0 0 1 1 1 1 1 1 1 0 1 0 0 1 0 1 0 0 0 12 1 1461.7728 Q6L8Q7 Q6L8Q7 376 387 PDE12 2,5-phosphodiesterase 12 yes yes 3 0.00029782 135.02 By MS/MS 5.5 0.5 1 1 2 2858000 2858000 0 6493 1686 6695 16100;16101 13065 13065 1 25473 0 IKQIQLEQDSGK CAGKKQSQVIPKTVRIKQIQLEQDSGKSLH TVRIKQIQLEQDSGKSLHDNLRSQTLIDLN R I K G K S 0 0 0 1 0 3 1 1 0 2 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1385.7514 O75879 O75879 185 196 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.037278 97.779 By MS/MS 6 0 1 1 422660 422660 0 6494 351 6696 16102 13066 13066 1 2905.4 0 IKQNLESVQK I K Q K 0 0 1 0 0 2 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1185.6717 REV__P0CG41 yes no 3 0.030458 73.233 By MS/MS 3 0 1 1 222470 222470 0 + 6495 2954 6697 16103 13067 13067 1 4070.6 0 IKQQIALDR ERNREKAEDRAARERIKQQIALDRAERAAR RAARERIKQQIALDRAERAARFAKTKEEVE R I K D R A 1 1 0 1 0 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1083.64 Q92575 Q92575 268 276 UBXN4 UBX domain-containing protein 4 yes yes 2;3 0.0010422 155.58 By MS/MS 5.33 0.471 2 1 3 1747100 1747100 0 6496 2058 6698 16104;16105;16106 13068;13069 13069 2 15956 0 IKSDHPGISITDLSK PMSAYMLWLNASREKIKSDHPGISITDLSK IKSDHPGISITDLSKKAGEIWKGMSKEKKE K I K S K K 0 0 0 2 0 0 0 1 1 3 1 2 0 0 1 3 1 0 0 0 0 0 15 1 1609.8675 Q08945 Q08945 565 579 SSRP1 FACT complex subunit SSRP1 yes yes 3 0.0038375 100.43 By MS/MS 5 0 1 1 1204600 1204600 0 6497 1313 6699 16107 13070 13070 1 12082 0 IKSQELEVK KETVDQVEELRRDLRIKSQELEVKNAAAND LRRDLRIKSQELEVKNAAANDKLKKMVKDQ R I K V K N 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 9 1 1072.6128 Q14204 Q14204 3224 3232 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0039633 123.21 By MS/MS 1.5 0.5 1 1 2 857680 857680 0 6498 1433 6700 16108;16109 13071 13071 1 242990 0 IKTPIPTSLR NVVLIEDNGNPVGTRIKTPIPTSLRKREGE PVGTRIKTPIPTSLRKREGEYSKVLAIAQN R I K L R K 0 1 0 0 0 0 0 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 10 1 1124.6917 Q6P1L8 Q6P1L8 119 128 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 3 0.021303 66.92 By MS/MS 10 0 1 1 464860 464860 0 6499 1699 6701 16110 13072 13072 1 25054 0 IKVAEDEAEAAAAAK AAMSLAGAEKNGLVKIKVAEDEAEAAAAAK IKVAEDEAEAAAAAKFTGLSKEELLKVAGS K I K A K F 7 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 15 1 1485.7675 P08195 P08195 146 160 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2;3 2.7749E-06 206.46 By MS/MS By matching 5.78 1.69 2 4 1 1 1 7 2 23569000 23494000 75332 6500 519 6702 16111;16112;16113;16114;16115;16116;16117;16118;16119 13073;13074;13075;13076;13077 13074 5 772170 63263 IKVDFVIPK PKVPSKNQNDPLPGRIKVDFVIPKELPFGD DPLPGRIKVDFVIPKELPFGDKDTKSKVTL R I K P K E 0 0 0 1 0 0 0 0 0 2 0 2 0 1 1 0 0 0 0 2 0 0 9 1 1057.6536 O75534 O75534 287 295 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.028473 86.882 By MS/MS 4.5 0.5 1 1 2 1684200 1684200 0 6501 333 6703 16120;16121 13078 13078 1 131420 0 ILAAALTECHR ELKLNNCGMGIGGGKILAAALTECHRKSSA GGGKILAAALTECHRKSSAQGKPLALKVFV K I L H R K 3 1 0 0 1 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1253.655 P46060 P46060 161 171 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.00033896 134.77 By MS/MS 5 0 1 1 2076500 2076500 0 6502 908 6704 16122 13079;13080 13080 2 20826 0 ILACDDLDEAAR RVDDAKALIADSGLKILACDDLDEAARMVV GLKILACDDLDEAARMVVKLSEIVTLAKQA K I L A R M 3 1 0 3 1 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1360.6293 Q9P2R7 Q9P2R7 427 438 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 5.7554E-07 201.61 By MS/MS 7 0 1 1 10423000 10423000 0 6503 2690 6705 16123 13081 13081 1 163620 0 ILADAAAEGVPVR CVAIFVFMIRTLRLKILADAAAEGVPVRGA LKILADAAAEGVPVRGARNQLRMYLTMAVA K I L V R G 4 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 13 0 1280.7089 Q5BJH7 Q5BJH7 271 283 YIF1B Protein YIF1B yes yes 2 9.202E-05 174.4 By MS/MS 4.5 3.5 1 1 2 2307600 2307600 0 6504 1599 6706 16124;16125 13082;13083;13084 13083 3 84623 0 ILADQQDKYMK EEISELFYDAKSSAKILADQQDKYMK____ SSAKILADQQDKYMK_______________ K I L M K - 1 0 0 2 0 2 0 0 0 1 1 2 1 0 0 0 0 0 1 0 0 0 11 1 1351.6806 Q9Y265 Q9Y265 446 456 RUVBL1 RuvB-like 1 yes yes 2 0.00011571 139.43 By MS/MS 6 0 1 1 1394300 1394300 0 6505 2815 6707 16126 13085 13085 1 9585 0 ILAEGGGAK HVDHGKTTLTAAITKILAEGGGAKFKKYEE TAAITKILAEGGGAKFKKYEEIDNAPEERA K I L A K F 2 0 0 0 0 0 1 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 814.45487 P49411 P49411 80 88 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.035459 82.241 By MS/MS 7.4 1.85 1 1 1 1 1 5 58382000 58382000 0 6506 949 6708 16127;16128;16129;16130;16131 13086 13086 1 1026300 0 ILAFPCNQFGK QLVDLHARYAECGLRILAFPCNQFGKQEPG CGLRILAFPCNQFGKQEPGSNEEIKEFAAG R I L G K Q 1 0 1 0 1 1 0 1 0 1 1 1 0 2 1 0 0 0 0 0 0 0 11 0 1293.654 P36969 P36969 97 107 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes yes 2 0.0011427 118.74 By MS/MS 9.5 0.5 1 1 2 535210 535210 0 6507 843 6709 16132;16133 13087 13087 1 12514 0 ILAHNNFVGR KEAKDTKTADEVPLKILAHNNFVGRLIGKE EVPLKILAHNNFVGRLIGKEGRNLKKVEQD K I L G R L 1 1 2 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1139.62 Q9NZI8;O00425 Q9NZI8 281 290 IGF2BP1;IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 3 yes no 2 0.0015278 113.41 By MS/MS 5 0 1 1 1145400 1145400 0 6508 2649 6710 16134 13088 13088 1 11488 0 ILANGEIVQDDDPRVR ______________________________ LANGEIVQDDDPRVRTTTQPPRGSIPRQSF R I L V R T 1 2 1 3 0 1 1 1 0 2 1 0 0 0 1 0 0 0 0 2 0 0 16 1 1808.9381 Q96D05 Q96D05 4 19 C10orf35 Uncharacterized protein C10orf35 yes yes 3 0.026071 68.262 By MS/MS 10 0 1 1 398510 398510 0 6509 2130 6711 16135 13089 13089 1 21478 0 ILAQATSDLVNAIK FSSMGDAGEMVRQARILAQATSDLVNAIKA RILAQATSDLVNAIKADAEGESDLENSRKL R I L I K A 3 0 1 1 0 1 0 0 0 2 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1455.8297 Q9Y490 Q9Y490 828 841 TLN1 Talin-1 yes yes 2 0.00081323 128.57 By MS/MS 2 0 1 1 185370 185370 0 6510 2888 6712 16136 13090 13090 1 62700 0 ILAQVVGDVDTSLPR SQRSFVEFILEPLYKILAQVVGDVDTSLPR ILAQVVGDVDTSLPRTLDELGIHLTKEELK K I L P R T 1 1 0 2 0 1 0 1 0 1 2 0 0 0 1 1 1 0 0 3 0 0 15 0 1581.8726 Q15029 Q15029 380 394 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0001264 179.93 By MS/MS 4 0 1 1 511230 511230 0 6511 1476 6713 16137 13091 13091 1 48110 0 ILATMNPGGDFGKK KDSEIELLTAGKKFRILATMNPGGDFGKKE RILATMNPGGDFGKKELSPALRNRFTEIWC R I L K K E 1 0 1 1 0 0 0 3 0 1 1 2 1 1 1 0 1 0 0 0 0 0 14 1 1447.7493 Q9NU22 Q9NU22 1517 1530 MDN1 Midasin yes yes 3 0.03788 59.227 By MS/MS 1.5 0.5 1 1 2 288710 288710 0 6512 2580 6714 16138;16139 13092 13092 1117 0 86813 0 ILATPPQEDAPSVDIANIR QIIQEIYSQIQSKKKILATPPQEDAPSVDI PPQEDAPSVDIANIRMPSLPSYKVGDKIAT K I L I R M 3 1 1 2 0 1 1 0 0 3 1 0 0 0 3 1 1 0 0 1 0 0 19 0 2019.0637 P29401 P29401 284 302 TKT Transketolase yes yes 2 0.00012151 147.75 By MS/MS 5 0 1 1 1563200 1563200 0 6513 758 6715 16140 13093 13093 1 15678 0 ILAVDSSCQADLVK SARELRPLLVFIWAKILAVDSSCQADLVKD KILAVDSSCQADLVKDNGHKYFLSVLADPY K I L V K D 2 0 0 2 1 1 0 0 0 1 2 1 0 0 0 2 0 0 0 2 0 0 14 0 1517.7759 Q8N122 Q8N122 498 511 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.00035474 163.45 By MS/MS 3 0 1 1 333120 333120 0 6514 1899 6716 16141 13094 13094 1 6095.1 0 ILAVIQGSHQK EKTTYDHVTREKLDRILAVIQGSHQKALVM KLDRILAVIQGSHQKALVMYSNLDLKTQEA R I L Q K A 1 0 0 0 0 2 0 1 1 2 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1192.6928 O95900 O95900 164 174 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.0005069 126.31 By MS/MS 7 0 1 1 287450 287450 0 6515 432 6717 16142 13095 13095 1 4512.5 0 ILAVNGQDVR PRGLAARSGLRVGDRILAVNGQDVRDATHQ RVGDRILAVNGQDVRDATHQEAVSALLRPC R I L V R D 1 1 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1083.6037 Q14160 Q14160 1058 1067 SCRIB Protein scribble homolog yes yes 2 0.011013 92.051 By MS/MS 2.5 0.5 1 1 2 187220 187220 0 6516 1425 6718 16143;16144 13096;13097 13096 2 63326 0 ILCAHGGR ______________________________ VCCFITKILCAHGGRMALDALLQEIALSEP K I L G R M 1 1 0 0 1 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 882.4494 Q7Z2W4 Q7Z2W4 13 20 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0073644 114.54 By MS/MS 4.5 0.5 1 1 2 1584600 1584600 0 6517 1778 6719 16145;16146 13098 13098 1 138520 0 ILCFYGPPGVGK EFIAVSQLRGSTQGKILCFYGPPGVGKTSI QGKILCFYGPPGVGKTSIARSIARALNREY K I L G K T 0 0 0 0 1 0 0 3 0 1 1 1 0 1 2 0 0 0 1 1 0 0 12 0 1306.6744 P36776 P36776 518 529 LONP1 Lon protease homolog, mitochondrial yes yes 2 6.1334E-05 163.9 By MS/MS 4 0 1 1 949390 949390 0 6518 839 6720 16147 13099 13099 1 89344 0 ILDAVVAQEPLHR EGPLCDELIRNVKFKILDAVVAQEPLHRGG FKILDAVVAQEPLHRGGGQIIPTARRVVYS K I L H R G 2 1 0 1 0 1 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 0 13 0 1459.8147 Q15029 Q15029 791 803 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0010844 124.6 By MS/MS 3.5 0.5 1 1 2 2120500 2120500 0 6519 1476 6721 16148;16149 13100;13101 13101 1 182240 0 ILDDICVAK KLPETNLFETEETRKILDDICVAKAVECPP TEETRKILDDICVAKAVECPPPRTTARLLD K I L A K A 1 0 0 2 1 0 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1045.5478 Q15046 Q15046 422 430 KARS Lysine--tRNA ligase yes yes 2 0.010744 99.139 By MS/MS 5 0 1 1 3268700 3268700 0 6520 1481 6722 16150 13102 13102 1 32784 0 ILDEIEEHNIK ADTLTLKERERLKKRILDEIEEHNIKIYHL LKKRILDEIEEHNIKIYHLPDAESDEDEDF R I L I K I 0 0 1 1 0 0 3 0 1 3 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1351.6983 Q15019 Q15019 199 209 SEPT2 Septin-2 yes yes 2 0.00075922 126.39 By MS/MS 7 0 1 1 2594800 2594800 0 6521 1472 6723 16151 13103 13103 1 40734 0 ILDIDNVDLAMGK PIQQAKALGLQFHSRILDIDNVDLAMGKMM SRILDIDNVDLAMGKMMEQGPVLIITFQAQ R I L G K M 1 0 1 3 0 0 0 1 0 2 2 1 1 0 0 0 0 0 0 1 0 0 13 0 1415.733 O43615 O43615 369 381 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 1.631E-08 223.77 By MS/MS 8 1.22 2 1 1 4 5275400 5275400 0 6522 221 6724;6725 16152;16153;16154;16155 13104;13105;13106 13106 109 3 82646 0 ILDLLKGTEASTK QLLSGSYIHYFHCLRILDLLKGTEASTKNI LRILDLLKGTEASTKNIFGRYSSQRMKDWQ R I L T K N 1 0 0 1 0 0 1 1 0 1 3 2 0 0 0 1 2 0 0 0 0 0 13 1 1387.7922 Q96JB5 Q96JB5 71 83 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.0018465 144.7 By MS/MS 5 0 1 1 1870900 1870900 0 6523 2177 6726 16156 13107 13107 1 18764 0 ILDNTSEPQPGEAR GRLLKPREMEQQMQRILDNTSEPQPGEARL RILDNTSEPQPGEARLAALTAGDRVPWARC R I L A R L 1 1 1 1 0 1 2 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 14 0 1525.7372 P50416 P50416 366 379 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 4.1764E-07 204.85 By MS/MS 3 1.58 1 1 1 1 4 1215500 1215500 0 6524 974 6727 16157;16158;16159;16160 13108;13109;13110;13111 13111 4 85526 0 ILDSAEFIK SFKAPSYLEISSMRRILDSAEFIKFTVIRP ISSMRRILDSAEFIKFTVIRPFPGLVINNQ R I L I K F 1 0 0 1 0 0 1 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1034.5648 P78347 P78347 929 937 GTF2I General transcription factor II-I yes yes 2 0.00066887 141.52 By MS/MS 3.5 0.5 1 1 2 3890600 3890600 0 6525 1221 6728 16161;16162 13112 13112 1 140100 0 ILDSVGIEADDDR ALGGNSSPSAKDIKKILDSVGIEADDDRLN KKILDSVGIEADDDRLNKVISELNGKNIED K I L D R L 1 1 0 4 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1416.6733 P05387 P05387 26 38 RPLP2 60S acidic ribosomal protein P2 yes yes 2 1.8145E-05 190.53 By MS/MS 10 0 1 1 400410 400410 0 6526 490 6729 16163 13113 13113 1 21581 0 ILDSVGIEADDDRLNK ALGGNSSPSAKDIKKILDSVGIEADDDRLN LDSVGIEADDDRLNKVISELNGKNIEDVIA K I L N K V 1 1 1 4 0 0 1 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 16 1 1771.8952 P05387 P05387 26 41 RPLP2 60S acidic ribosomal protein P2 yes yes 2;3 3.1428E-06 206.74 By MS/MS 10 0 2 2 1945600 1945600 0 6527 490 6730 16164;16165 13114;13115 13115 2 104860 0 ILDTLGLLR KKKEAMIQCSLEACRILDTLGLLRQEAVSR SLEACRILDTLGLLRQEAVSRKRKAKNWED R I L L R Q 0 1 0 1 0 0 0 1 0 1 4 0 0 0 0 0 1 0 0 0 0 0 9 0 1012.6281 Q9BWU0 Q9BWU0 437 445 SLC4A1AP Kanadaptin yes yes 2 3.4534E-05 174.52 By MS/MS 4.5 0.5 1 1 2 360630 360630 0 6528 2353 6731 16166;16167 13116 13116 1 25032 0 ILDVAQDLK WYMRGEQYDQAKLSRILDVAQDLKALSMLL QAKLSRILDVAQDLKALSMLLNGTPFAFVI R I L L K A 1 0 0 2 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 9 0 1013.5757 A5YKK6 A5YKK6 560 568 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0094674 113.71 By MS/MS 3 0.707 1 2 1 4 2655100 2655100 0 6529 19 6732 16168;16169;16170;16171 13117;13118 13117 2 481990 0 ILDVLEEIPK VCNTPHERLRILYTKILDVLEEIPKNAAYR ILYTKILDVLEEIPKNAAYRKYTEQITNEK K I L P K N 0 0 0 1 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1167.6751 Q16718 Q16718 31 40 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2 0.0012537 118.71 By MS/MS 10 0 1 1 750770 750770 0 6530 1558 6733 16172 13119;13120 13120 2 40464 0 ILDVMYSR STFDTQITKKMGYYKILDVMYSRLPKDDVH KKMGYYKILDVMYSRLPKDDVHAKESKINQ K I L S R L 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 1 0 0 8 0 995.511 P78527 P78527 1876 1883 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0024022 138.54 By MS/MS 1.5 0.5 1 1 2 1377300 1377300 0 6531 1225 6734 16173;16174 13121;13122 13122 722 2 414030 0 ILDVNDNIPVVENK EVTDKPVKQAQVQIRILDVNDNIPVVENKV RILDVNDNIPVVENKVLEGMVEENQVNVEV R I L N K V 0 0 3 2 0 0 1 0 0 2 1 1 0 0 1 0 0 0 0 3 0 0 14 0 1580.841 Q14126 Q14126 262 275 DSG2 Desmoglein-2 yes yes 2 6.3534E-11 227.48 By MS/MS 3 0 1 1 377220 377220 0 6532 1420 6735 16175 13123 13123 1 6902.1 0 ILDYSCSQDR VPVDIMDLALSAHIKILDYSCSQDRDTQKI SAHIKILDYSCSQDRDTQKIQWIDRFIEEL K I L D R D 0 1 0 2 1 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 10 0 1255.5503 Q93008;O00507 Q93008 535 544 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0015012 113.93 By MS/MS 2.5 1.12 1 1 1 1 4 1332700 1332700 0 6533 2085 6736 16176;16177;16178;16179 13124 13124 1 307420 0 ILDYSCSQDRDTQK VPVDIMDLALSAHIKILDYSCSQDRDTQKI KILDYSCSQDRDTQKIQWIDRFIEELRTND K I L Q K I 0 1 0 3 1 2 0 0 0 1 1 1 0 0 0 2 1 0 1 0 0 0 14 1 1727.7785 Q93008 Q93008 535 548 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0078072 114.76 By MS/MS 2 0 1 1 188520 188520 0 6534 2085 6737 16180 13125 13125 1 63765 0 ILEALETEKQK ATKQALEDHSIRHARILEALETEKQKIAKE RHARILEALETEKQKIAKEVQILQQNRNNR R I L Q K I 1 0 0 0 0 1 3 0 0 1 2 2 0 0 0 0 1 0 0 0 0 0 11 1 1300.7238 Q15058 Q15058 1050 1060 KIF14 Kinesin-like protein KIF14 yes yes 2 0.0015106 135.43 By MS/MS 2 0 1 1 270820 270820 0 6535 1486 6738 16181 13126 13126 1 91602 0 ILEDNSIPQVK AVRVTGADVPMPYAKILEDNSIPQVKDIIF PYAKILEDNSIPQVKDIIFAIKKTLNI___ K I L V K D 0 0 1 1 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1254.682 P11177 P11177 337 347 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 8.5494E-14 261.03 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 22667000 22635000 32018 6536 575 6739 16182;16183;16184;16185;16186 13127;13128;13129;13130 13128 2 346310 57664 ILEDSGFDEQQEFR SQPALTSSRVCFPERILEDSGFDEQQEFRS RILEDSGFDEQQEFRSRCSSVTGVQRRVHE R I L F R S 0 1 0 2 0 2 3 1 0 1 1 0 0 2 0 1 0 0 0 0 0 0 14 0 1711.7689 O60343 O60343 300 313 TBC1D4 TBC1 domain family member 4 yes yes 2 4.378E-11 260.57 By MS/MS 3 0 1 1 533140 533140 0 6537 256 6740 16187 13131 13131 1 9755 0 ILEDTQFVDGYK TSAEASPAECCQHAKILEDTQFVDGYKQLG HAKILEDTQFVDGYKQLGFQETAYGEFLSR K I L Y K Q 0 0 0 2 0 1 1 1 0 1 1 1 0 1 0 0 1 0 1 1 0 0 12 0 1426.698 Q14C86 Q14C86 76 87 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 6.9157E-06 181.68 By MS/MS 2.5 0.5 1 1 2 569610 569610 0 6538 1466 6741 16188;16189 13132 13132 1 154260 0 ILEDVVGVPEK EDEHFEFHSRPCPTKILEDVVGVPEKKVLP CPTKILEDVVGVPEKKVLPITVPKSPAFAL K I L E K K 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 3 0 0 11 0 1196.6653 Q9ULW0 Q9ULW0 466 476 TPX2 Targeting protein for Xklp2 yes yes 2 0.00069443 127.68 By MS/MS 3.75 0.829 2 1 1 4 12216000 12216000 0 6539 2776 6742 16190;16191;16192;16193 13133;13134 13134 2 276020 0 ILEEENSLAEYHSR SRLSKKVTIDFAGRKILEEENSLAEYHSRL KILEEENSLAEYHSRLDETIQAIANGTLNQ K I L S R L 1 1 1 0 0 0 4 0 1 1 2 0 0 0 0 2 0 0 1 0 0 0 14 0 1688.8006 Q15650 Q15650 335 348 TRIP4 Activating signal cointegrator 1 yes yes 3 0.02028 82.202 By MS/MS 5 0 1 1 862490 862490 0 6540 1523 6743 16194 13135 13135 1 8650.3 0 ILEFFGLK ILFIFIDSDHTDNQRILEFFGLKKEECPAV DHTDNQRILEFFGLKKEECPAVRLITLEEE R I L L K K 0 0 0 0 0 0 1 1 0 1 2 1 0 2 0 0 0 0 0 0 0 0 8 0 965.5586 P07237 P07237 301 308 P4HB Protein disulfide-isomerase yes yes 2 0.015888 104.21 By MS/MS 6 0 1 1 235770 235770 0 6541 507 6744 16195 13136 13136 1 1620.8 0 ILEFIAVSQLR VLEEDHYGMEDVKKRILEFIAVSQLRGSTQ VKKRILEFIAVSQLRGSTQGKILCFYGPPG R I L L R G 1 1 0 0 0 1 1 0 0 2 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1287.7551 P36776 P36776 501 511 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.0040602 106.4 By MS/MS 4 0 1 1 48026 48026 0 6542 839 6745 16196 13137 13137 1 4519.5 0 ILEGTETTK LEERVPINDVLAEDKILEGTETTKYVFTDI VLAEDKILEGTETTKYVFTDISYSIPHRER K I L T K Y 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 3 0 0 0 0 0 9 0 990.52334 P82650 P82650 147 155 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.039585 80.455 By MS/MS By matching 7 0 2 1 1 3432100 3335000 97079 6543 1229 6746 16197;16198 13138 13138 1 52353 174840 ILELDQELIK NVKYELQQLEGSSDRILELDQELIKAEREL GSSDRILELDQELIKAERELSKAEKNSNVE R I L I K A 0 0 0 1 0 1 2 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1212.6966 Q92878 Q92878 474 483 RAD50 DNA repair protein RAD50 yes yes 2 2.77E-05 162.88 By MS/MS 3 0 1 1 210320 210320 0 6544 2074 6747 16199 13139 13139 1 3848.2 0 ILELDQFK NIYVLQELDNPGAKRILELDQFKGQQGQKR DNPGAKRILELDQFKGQQGQKRFQDMMGHG R I L F K G 0 0 0 1 0 1 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 P12956 P12956 116 123 XRCC6 X-ray repair cross-complementing protein 6 yes yes 1;2 0.019664 100.02 By MS/MS 5 0 2 2 2700500 2700500 0 6545 596 6748 16200;16201 13140;13141 13140 1 27085 0 ILELDQFKGQQGQK NIYVLQELDNPGAKRILELDQFKGQQGQKR RILELDQFKGQQGQKRFQDMMGHGSDYSLS R I L Q K R 0 0 0 1 0 4 1 2 0 1 2 2 0 1 0 0 0 0 0 0 0 0 14 1 1630.8679 P12956 P12956 116 129 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.0045419 126.66 By MS/MS 5 0 1 1 1137700 1137700 0 6546 596 6749 16202 13142 13142 1 11410 0 ILELDQFKGQQGQKR NIYVLQELDNPGAKRILELDQFKGQQGQKR ILELDQFKGQQGQKRFQDMMGHGSDYSLSE R I L K R F 0 1 0 1 0 4 1 2 0 1 2 2 0 1 0 0 0 0 0 0 0 0 15 2 1786.969 P12956 P12956 116 130 XRCC6 X-ray repair cross-complementing protein 6 yes yes 3 0.035724 69.229 By MS/MS 5 0 1 1 1196900 1196900 0 6547 596 6750 16203 13143 13143 1 12005 0 ILELESSLEK KLRDLQQEAETYRTRILELESSLEKSLQEN TYRTRILELESSLEKSLQENKNQSKDLAVH R I L E K S 0 0 0 0 0 0 3 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 10 0 1159.6336 Q13439 Q13439 569 578 GOLGA4 Golgin subfamily A member 4 yes yes 2 0.039468 85.862 By MS/MS 2 0 1 1 0 0 0 6548 1385 6751 16204 13144 13144 1 0 0 ILENSEDSSPECLF MNASGPIKEKMGIFKILENSEDSSPECLF_ KILENSEDSSPECLF_______________ K I L L F - 0 0 1 1 1 0 3 0 0 1 2 0 0 1 1 3 0 0 0 0 0 0 14 0 1638.7083 Q9NRZ9 Q9NRZ9 825 838 HELLS Lymphoid-specific helicase yes yes 2 0.0022842 111.63 By MS/MS 4 0 1 1 349050 349050 0 6549 2565 6752 16205 13145 13145 1 32848 0 ILETTTFFQR EQLDPDELETITMHKILETTTFFQRAVYLG ITMHKILETTTFFQRAVYLGELPHDQDVVE K I L Q R A 0 1 0 0 0 1 1 0 0 1 1 0 0 2 0 0 3 0 0 0 0 0 10 0 1254.6608 Q9NYU2 Q9NYU2 659 668 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 1.9971E-07 181.41 By MS/MS 3 0 1 1 142460 142460 0 6550 2638 6753 16206 13146 13146 1 2606.6 0 ILEVHIDK RCKSCNGRKIVREKKILEVHIDKGMKDGQK KIVREKKILEVHIDKGMKDGQKITFHGEGD K I L D K G 0 0 0 1 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 965.55458 P31689 P31689 207 214 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.014122 104.44 By MS/MS 6 0 2 2 6101000 6101000 0 6551 787 6754 16207;16208 13147;13148 13148 2 41940 0 ILEVHVDK RCKKCEGKKVIKEVKILEVHVDKGMKHGQR KVIKEVKILEVHVDKGMKHGQRITFTGEAD K I L D K G 0 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 951.53893 O60884 O60884 216 223 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.015085 93.162 By MS/MS 7 0 1 1 1245400 1245400 0 6552 285 6755 16209 13149 13149 1 19550 0 ILEVLPGR FLCPADVTDPRTSQRILEVLPGRRADVILS DPRTSQRILEVLPGRRADVILSDMAPNATG R I L G R R 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 8 0 895.5491 Q9UI43 Q9UI43 139 146 FTSJ2 rRNA methyltransferase 2, mitochondrial yes yes 2 0.0069321 121.29 By MS/MS 8.5 0.5 1 1 2 773520 773520 0 6553 2739 6756 16210;16211 13150;13151 13150 2 9765.7 0 ILFAPGSEEAIER ALSSRAASVSSLHERILFAPGSEEAIERLK ERILFAPGSEEAIERLKETEKIIAELNETW R I L E R L 2 1 0 0 0 0 3 1 0 2 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1430.7405 Q12756 Q12756 424 436 KIF1A Kinesin-like protein KIF1A yes yes 2 0.00079835 111.5 By MS/MS 2 0.816 1 1 1 3 1154000 1154000 0 6554 1324 6757 16212;16213;16214 13152;13153;13154 13153 3 331100 0 ILFDGIPLEK VGMAGVAIDTVEDTKILFDGIPLEKMSVSM VEDTKILFDGIPLEKMSVSMTMNGAVIPVL K I L E K M 0 0 0 1 0 0 1 1 0 2 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1143.654 P22033 P22033 172 181 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.015585 88.948 By MS/MS 5 0 1 1 184720 184720 0 6555 685 6758 16215 13155 13155 1 1852.6 0 ILFFNTPK IEKAYEKILFTEATRILFFNTPKKMTDYAK LFTEATRILFFNTPKKMTDYAKKRGWVLGP R I L P K K 0 0 1 0 0 0 0 0 0 1 1 1 0 2 1 0 1 0 0 0 0 0 8 0 978.55385 P48556 P48556 290 297 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 0.0053054 113.41 By MS/MS 8 0 1 1 5911700 5911700 0 6556 937 6759 16216 13156 13156 1 74635 0 ILFKDKDR KKIRQSIDKTAGKIRILFKDKDRNWDDIES KTAGKIRILFKDKDRNWDDIESKLRAESEV R I L D R N 0 1 0 2 0 0 0 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 8 2 1033.592 Q5SW79;Q96L14 Q5SW79 1441 1448 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 3 0.054787 77.058 By MS/MS 2 0 1 1 150760 150760 0 6557 1623 6760 16217 13157 13157 1 50992 0 ILFRPVASQLPR ITGSKDLQNVNITLRILFRPVASQLPRIFT TLRILFRPVASQLPRIFTSIGEDYDERVLP R I L P R I 1 2 0 0 0 1 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 12 1 1395.8351 P35232 P35232 94 105 PHB Prohibitin yes yes 2;3 0.018938 145.55 By MS/MS 9 0.816 2 2 2 6 43390000 43390000 0 6558 814 6761 16218;16219;16220;16221;16222;16223 13158;13159 13158 2 567980 0 ILFVGPCESGK ______________________________ LKAKILFVGPCESGKTVLANFLTESSDITE K I L G K T 0 0 0 0 1 0 1 2 0 1 1 1 0 1 1 1 0 0 0 1 0 0 11 0 1205.6114 Q9H7X7 Q9H7X7 6 16 IFT22 Intraflagellar transport protein 22 homolog yes yes 2 0.006064 101.11 By MS/MS 9 0 1 1 347390 347390 0 6559 2467 6762 16224 13160 13160 1 6836.7 0 ILFVSQGSEIASQGR EVQLVLNQLIGITSKILFVSQGSEIASQGR ILFVSQGSEIASQGRELANHFQSEGTPVMI K I L G R E 1 1 0 0 0 2 1 2 0 2 1 0 0 1 0 3 0 0 0 1 0 0 15 0 1590.8366 Q9NUQ7 Q9NUQ7 370 384 UFSP2 Ufm1-specific protease 2 yes yes 2 0.00032636 182.37 By MS/MS 6.5 0.5 1 1 2 7872400 7872400 0 6560 2585 6763 16225;16226 13161;13162 13162 2 59700 0 ILGADTSVDLEETGR QKTGTAEMSSILEERILGADTSVDLEETGR ILGADTSVDLEETGRVLSIGDGIARVHGLR R I L G R V 1 1 0 2 0 0 2 2 0 1 2 0 0 0 0 1 2 0 0 1 0 0 15 0 1574.7788 P25705 P25705 59 73 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 7.8774E-31 266.93 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 132920000 132400000 527570 6561 723 6764 16227;16228;16229;16230;16231;16232 13163;13164;13165;13166;13167;13168;13169 13163 7 965910 540610 ILGEELGFVK DLKSKDFPEARAYLRILGEELGFVKLHDLQ RAYLRILGEELGFVKLHDLQLLGKLLLKGS R I L V K L 0 0 0 0 0 0 2 2 0 1 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1103.6227 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 776 785 yes yes 2 0.041942 76.221 By MS/MS 3 1.41 1 1 1 1 1 5 442850 442850 0 + 6562 33 6765 16233;16234;16235;16236;16237 13170 13170 1 70308 0 ILGEESGAPSPSPQK ILGKEGATLEPKQQRILGEESGAPSPSPQK ILGEESGAPSPSPQKHGSLVDEEVWGLPEE R I L Q K H 1 0 0 0 0 1 2 2 0 1 1 1 0 0 3 3 0 0 0 0 0 0 15 0 1495.7518 Q9UL54 Q9UL54 816 830 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.0067709 98.407 By MS/MS 3 0 1 1 277540 277540 0 6563 2770 6766 16238 13171 13171 1 5078.3 0 ILGIPVIVTEQYPK GDIISVGQRLLQGARILGIPVIVTEQYPKG RILGIPVIVTEQYPKGLGSTVQEIDLTGVK R I L P K G 0 0 0 0 0 1 1 1 0 3 1 1 0 0 2 0 1 0 1 2 0 0 14 0 1568.9178 Q96CN7 Q96CN7 149 162 ISOC1 Isochorismatase domain-containing protein 1 yes yes 2 0.0082531 94.82 By MS/MS 8 0 1 1 95305 95305 0 6564 2122 6767 16239 13172 13172 1 1203.2 0 ILGLAPSR LYILCTMSIRQNIQKILGLAPSRAATKQAG IRQNIQKILGLAPSRAATKQAGGFLGPPPP K I L S R A 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 8 0 825.50724 Q9UM00 Q9UM00 212 219 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2 0.01951 100.19 By MS/MS 9 0 1 1 4722400 4722400 0 6565 2779 6768 16240 13173 13173 1 92937 0 ILGLLDAYLK HNKQATENAKEEVRRILGLLDAYLKTRTFL EEVRRILGLLDAYLKTRTFLVGERVTLADI R I L L K T 1 0 0 1 0 0 0 1 0 1 4 1 0 0 0 0 0 0 1 0 0 0 10 0 1117.6747 P26641 P26641 138 147 EEF1G Elongation factor 1-gamma yes yes 2 0.0007671 128.12 By MS/MS 6.5 0.5 1 1 2 1163700 1163700 0 6566 736 6769 16241;16242 13174;13175 13174 2 9661.5 0 ILGPAESDEFLAR STESVAEISSNSLERILGPAESDEFLARVY ERILGPAESDEFLARVYEKLITGCYNILAN R I L A R V 2 1 0 1 0 0 2 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 13 0 1416.7249 Q5T4S7 Q5T4S7 1337 1349 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.00092287 127.51 By MS/MS 2 0.816 1 1 1 3 591570 591570 0 6567 1633 6770 16243;16244;16245 13176;13177 13176 2 129610 0 ILGSEGEPAFR RKNYGVTFPIFHKIKILGSEGEPAFRFLVD HKIKILGSEGEPAFRFLVDSSKKEPRWNFW K I L F R F 1 1 0 0 0 0 2 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1174.5982 Q8TED1 Q8TED1 142 152 GPX8 Probable glutathione peroxidase 8 yes yes 2 3.5927E-09 210.6 By MS/MS 9 0 1 1 2268300 2268300 0 6568 2000 6771 16246 13178;13179 13178 2 44640 0 ILGVDKNASEDEIKK AQLELKKSKRKDYYKILGVDKNASEDEIKK ILGVDKNASEDEIKKAYRKRALMHHPDRHS K I L K K A 1 0 1 2 0 0 2 1 0 2 1 3 0 0 0 1 0 0 0 1 0 0 15 2 1657.8887 Q99615 Q99615 385 399 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.0079655 91.076 By MS/MS 6 0 1 1 4171800 4171800 0 6569 2253 6772 16247 13180 13180 1 28678 0 ILGVGISTGGR MCVEAAAEAVKLNCRILGVGISTGGRVNPR LNCRILGVGISTGGRVNPREGIVLHSTKLI R I L G R V 0 1 0 0 0 0 0 4 0 2 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1028.5978 Q9Y223 Q9Y223 467 477 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0013302 118.71 By MS/MS 5 0 1 1 1433300 1433300 0 6570 2808 6773 16248 13181 13181 1 14376 0 ILGVGPDDPDLVR KSTVFGTALNYVSLRILGVGPDDPDLVRAR LRILGVGPDDPDLVRARNILHKKGGAVAIP R I L V R A 0 1 0 3 0 0 0 2 0 1 2 0 0 0 2 0 0 0 0 2 0 0 13 0 1364.73 P48449 P48449 163 175 LSS Lanosterol synthase yes yes 2 0.00024504 134.57 By MS/MS 5 0 1 1 1824500 1824500 0 6571 935 6774 16249 13182 13182 1 18299 0 ILHENTQTDK ITAANNLLAAAIDTRILHENTQTDKALYNR AIDTRILHENTQTDKALYNRLVPLVNGVRE R I L D K A 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 0 2 0 0 0 0 0 10 0 1197.599 Q6UB35 Q6UB35 507 516 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 6.6095E-12 216.12 By MS/MS By MS/MS 4.5 0.764 4 1 1 4 2 6836900 6697000 139910 6572 1728 6775 16250;16251;16252;16253;16254;16255 13183;13184;13185;13186 13185 4 560750 298110 ILHENTQTDKALYNR ITAANNLLAAAIDTRILHENTQTDKALYNR ILHENTQTDKALYNRLVPLVNGVREFSEIQ R I L N R L 1 1 2 1 0 1 1 0 1 1 2 1 0 0 0 0 2 0 1 0 0 0 15 1 1814.9275 Q6UB35 Q6UB35 507 521 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.0061562 90.689 By MS/MS 4 0 1 1 940560 940560 0 6573 1728 6776 16256 13187 13187 1 88513 0 ILHLLGK CEFIEDCEHTVLATKILHLLGKEGPRTPVP EHTVLATKILHLLGKEGPRTPVPSKYIRFI K I L G K E 0 0 0 0 0 0 0 1 1 1 3 1 0 0 0 0 0 0 0 0 0 0 7 0 792.52216 Q9UBF2;Q92521 Q9UBF2 455 461 COPG2;PIGB Coatomer subunit gamma-2;GPI mannosyltransferase 3 yes no 2 0.015908 120.06 By MS/MS 4.5 0.5 1 1 2 3054700 3054700 0 6574 2697 6777 16257;16258 13188 13188 1 244070 0 ILHLLGQEGPK CEFIEDCEFTVLATRILHLLGQEGPKTTNP LATRILHLLGQEGPKTTNPSKYIRFIYNRV R I L P K T 0 0 0 0 0 1 1 2 1 1 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1203.6976 Q9Y678 Q9Y678 455 465 COPG1 Coatomer subunit gamma-1 yes yes 2;3 0.00078022 158.47 By MS/MS 4.5 0.5 2 2 4 19902000 19902000 0 6575 2933 6778 16259;16260;16261;16262 13189;13190;13191;13192 13190 4 1553700 0 ILHTYYK EKGTTEEVCRIYLLRILHTYYKFDYKAHQR VCRIYLLRILHTYYKFDYKAHQRQLTPPEG R I L Y K F 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 2 0 0 0 7 0 936.5069 Q99613;B5ME19 Q99613 507 513 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.024338 118.01 By MS/MS 4.14 1.25 1 1 2 2 1 7 22828000 22828000 0 6576 2252 6779 16263;16264;16265;16266;16267;16268;16269 13193;13194;13195;13196 13193 4 1748500 0 ILIANTGMDTDKIK KKIGVNQPKRIENAKILIANTGMDTDKIKI KILIANTGMDTDKIKIFGSRVRVDSTAKVA K I L I K I 1 0 1 2 0 0 0 1 0 3 1 2 1 0 0 0 2 0 0 0 0 0 14 1 1531.828 P78371 P78371 237 250 CCT2 T-complex protein 1 subunit beta yes yes 2;3 2.9111E-10 229 By MS/MS 6.5 0.5 3 3 6 51398000 51398000 0 6577 1222 6780;6781 16270;16271;16272;16273;16274;16275 13197;13198;13199 13199 714 3 368610 0 ILIIGESGVGK ______________________________ TTLKILIIGESGVGKSSLLLRFTDDTFDPE K I L G K S 0 0 0 0 0 0 1 3 0 3 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1084.6492 Q9NP72 Q9NP72 11 21 RAB18 Ras-related protein Rab-18 yes yes 2 0.001332 114.97 By MS/MS 9 0 1 1 1214700 1214700 0 6578 2524 6782 16276 13200 13200 1 23905 0 ILILGLDGAGK FSSIFSSLFGTREMRILILGLDGAGKTTIL REMRILILGLDGAGKTTILYRLQVGEVVTT R I L G K T 1 0 0 1 0 0 0 3 0 2 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1068.6543 P40616 P40616 20 30 ARL1 ADP-ribosylation factor-like protein 1 yes yes 2 0.00019341 143.7 By MS/MS 9.5 0.5 1 1 2 5347800 5347800 0 6579 860 6783 16277;16278 13201;13202 13201 2 119930 0 ILITTVPPNLR NETGFEISSSDATVKILITTVPPNLRKLDP ATVKILITTVPPNLRKLDPELHLDIKVLQS K I L L R K 0 1 1 0 0 0 0 0 0 2 2 0 0 0 2 0 2 0 0 1 0 0 11 0 1235.7602 Q12905 Q12905 175 185 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 0.041557 74.376 By MS/MS 7 0 1 1 1209700 1209700 0 6580 1338 6784 16279 13203 13203 1 18991 0 ILKEDILNYLEK NIKLSEVVGSGKDGRILKEDILNYLEKQTG DGRILKEDILNYLEKQTGAILPPSPKVEIM R I L E K Q 0 0 1 1 0 0 2 0 0 2 3 2 0 0 0 0 0 0 1 0 0 0 12 1 1489.8392 P11182 P11182 200 211 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 2;3 0.00074163 174.9 By MS/MS 6 0 2 2 1311200 1311200 0 6581 576 6785 16280;16281 13204;13205 13204 2 9013.6 0 ILKEEQELYQK INYCNEKLQQFFNERILKEEQELYQKEGLG FNERILKEEQELYQKEGLGVNEVHYVDNQD R I L Q K E 0 0 0 0 0 2 3 0 0 1 2 2 0 0 0 0 0 0 1 0 0 0 11 1 1419.7609 Q9UM54 Q9UM54 488 498 MYO6 Unconventional myosin-VI yes yes 2 1.3741E-08 223.31 By MS/MS 3 0 1 1 817930 817930 0 6582 2781 6786 16282 13206 13206 1 14966 0 ILKGEYAVR RPGANSPEMWSEAIKILKGEYAVRAIKEHK WSEAIKILKGEYAVRAIKEHKMDQAIIFCR K I L V R A 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 1 1047.6077 Q92499 Q92499 491 499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 3 0.032279 75.509 By MS/MS 4.5 0.5 1 1 2 936450 936450 0 6583 2046 6787 16283;16284 13207;13208 13207 2 41443 0 ILKNCGQK YQNALYLGDVSERVRILKNCGQKSLAYLTA DVSERVRILKNCGQKSLAYLTAATHGLDEE R I L Q K S 0 0 1 0 1 1 0 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 8 1 959.52224 P53621 P53621 748 755 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.031967 118.69 By MS/MS 1 0 1 1 85809 85809 0 6584 1034 6788 16285 13209 13209 1 20677 0 ILKPTDENLLK FGLAPGWVVNMADKKILKPTDENLLKYYTS ADKKILKPTDENLLKYYTS___________ K I L L K Y 0 0 1 1 0 0 1 0 0 1 3 2 0 0 1 0 1 0 0 0 0 0 11 1 1282.7497 Q9P015 Q9P015 282 292 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2;3 0.022476 104.43 By MS/MS 8 0.707 1 2 1 4 15837000 15837000 0 6585 2659 6789 16286;16287;16288;16289 13210;13211 13211 2 224420 0 ILLAAAPTSK GLLPSLPQYMIALLKILLAAAPTSKAKTDS IALLKILLAAAPTSKAKTDSINILADVLPE K I L S K A 3 0 0 0 0 0 0 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 10 0 983.60153 Q5VSL9;Q9ULQ0 Q5VSL9 527 536 STRIP1;STRIP2 Striatin-interacting protein 1;Striatin-interacting protein 2 yes no 2 0.018983 87.308 By MS/MS 4 0 1 1 1765900 1765900 0 6586 1645 6790 16290 13212 13212 1 166180 0 ILLAEVPTMAVEK DMVGIDAAIANAFRRILLAEVPTMAVEKVL RRILLAEVPTMAVEKVLVYNNTSIVQDEIL R I L E K V 2 0 0 0 0 0 2 0 0 1 2 1 1 0 1 0 1 0 0 2 0 0 13 0 1412.7949 O15160 O15160 79 91 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0013376 119.22 By MS/MS 7 0 2 2 2954400 2954400 0 6587 166 6791;6792 16291;16292 13213;13214 13213 90 2 46380 0 ILLAGCPSYDK SAEQHLISMCEDHDRILLAGCPSYDKLLSA DHDRILLAGCPSYDKLLSAKNKDYMSIIRM R I L D K L 1 0 0 1 1 0 0 1 0 1 2 1 0 0 1 1 0 0 1 0 0 0 11 0 1235.622 Q9Y223 Q9Y223 178 188 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.025737 82.645 By MS/MS 5 0 1 1 1006500 1006500 0 6588 2808 6793 16293 13215 13215 1 10095 0 ILLEELANSDPK PTGIEDEDALIADVKILLEELANSDPKLAL DVKILLEELANSDPKLALTGVPIVQWPKRD K I L P K L 1 0 1 1 0 0 2 0 0 1 3 1 0 0 1 1 0 0 0 0 0 0 12 0 1340.7187 Q9Y2K7 Q9Y2K7 494 505 KDM2A Lysine-specific demethylase 2A yes yes 2 7.4095E-07 187.42 By MS/MS 3 0 1 1 0 0 0 6589 2833 6794 16294 13216 13216 1 0 0 ILLITEDLK DFPEDADIDLKDVDKILLITEDLKNIGNTF LKDVDKILLITEDLKNIGNTFFKSQNWEMA K I L L K N 0 0 0 1 0 0 1 0 0 2 3 1 0 0 0 0 1 0 0 0 0 0 9 0 1056.6431 Q08752 Q08752 219 227 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.0079434 104.06 By MS/MS 7 0 1 1 264280 264280 0 6590 1312 6795 16295 13217 13217 1 4148.7 0 ILLLGEAQVGK ______________________________ RDVRILLLGEAQVGKTSLILSLVGEEFPEE R I L G K T 1 0 0 0 0 1 1 2 0 1 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1139.6914 Q8IXI1 Q8IXI1 7 17 RHOT2 Mitochondrial Rho GTPase 2 yes yes 2 0.00069013 127.76 By MS/MS 5 0 1 1 978260 978260 0 6591 1876 6796 16296 13218 13218 1 9811.4 0 ILLLGLDNAGK SILRKLKSAPDQEVRILLLGLDNAGKTTLL QEVRILLLGLDNAGKTTLLKQLASEDISHI R I L G K T 1 0 1 1 0 0 0 2 0 1 4 1 0 0 0 0 0 0 0 0 0 0 11 0 1125.6758 P36405 P36405 20 30 ARL3 ADP-ribosylation factor-like protein 3 yes yes 2 3.7665E-05 157.34 By MS/MS 9 0 1 1 235370 235370 0 6592 833 6797 16297 13219;13220 13219 2 4632.1 0 ILLNIEHR DTLHALIRDYREKKKILLNIEHRIMLRMAP DYREKKKILLNIEHRIMLRMAPDYDHLTLM K I L H R I 0 1 1 0 0 0 1 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1006.5924 P42345 P42345 2259 2266 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0043767 116.25 By MS/MS 2 0 1 1 395730 395730 0 6593 879 6798 16298 13221 13221 1 133850 0 ILLNPVQVFDVTK RSGTNMGEGLLGEFRILLNPVQVFDVTKTP FRILLNPVQVFDVTKTPPIKALQLCTLLPY R I L T K T 0 0 1 1 0 1 0 0 0 1 2 1 0 1 1 0 1 0 0 3 0 0 13 0 1484.8603 P52429 P52429 242 254 DGKE Diacylglycerol kinase epsilon yes yes 2 0.00021962 160.72 By MS/MS 6.5 0.5 1 1 2 905810 905810 0 6594 1015 6799 16299;16300 13222;13223 13222 2 6226.7 0 ILLTLPEQHR AVRHREIQALYVGSKILLTLPEQHRASYSH YVGSKILLTLPEQHRASYSHLSSNPLFMLE K I L H R A 0 1 0 0 0 1 1 0 1 1 3 0 0 0 1 0 1 0 0 0 0 0 10 0 1218.7085 Q68DK2 Q68DK2 1659 1668 ZFYVE26 Zinc finger FYVE domain-containing protein 26 yes yes 2 0.029477 82.241 By MS/MS 8.5 0.5 1 1 2 6678300 6678300 0 6595 1673 6800 16301;16302 13224;13225 13225 2 119180 0 ILLTQENPFFR FINSRIITVSMEDVKILLTQENPFFRKLSS EDVKILLTQENPFFRKLSSETYSQAKDLAK K I L F R K 0 1 1 0 0 1 1 0 0 1 2 0 0 2 1 0 1 0 0 0 0 0 11 0 1376.7452 Q08J23 Q08J23 629 639 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 1.2891E-05 170.5 By MS/MS 4 0 1 1 268200 268200 0 6596 1317 6801 16303 13226;13227 13226 2 25240 0 ILLWDTR PHKDSVFLSCSEDNRILLWDTRCPKPASQI LSCSEDNRILLWDTRCPKPASQIGCSAPGY R I L T R C 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 1 1 0 0 0 0 7 0 915.5178 Q9BQA1 Q9BQA1 192 198 WDR77 Methylosome protein 50 yes yes 2 0.047025 91.906 By MS/MS By matching 7.33 0.471 2 1 2 1 1803800 1701300 102440 6597 2286 6802 16304;16305;16306 13228 13228 1 25765 184490 ILMLGLDAAGK MGKVLSKIFGNKEMRILMLGLDAAGKTTIL KEMRILMLGLDAAGKTTILYKLKLGQSVTT R I L G K T 2 0 0 1 0 0 0 2 0 1 3 1 1 0 0 0 0 0 0 0 0 0 11 0 1100.6264 P62330 P62330 16 26 ARF6 ADP-ribosylation factor 6 yes yes 2 5.6032E-06 177.3 By MS/MS 9.33 0.471 2 1 3 945570 945570 0 6598 1158 6803;6804 16307;16308;16309 13229;13230;13231 13230 661 3 22043 0 ILMVGLDAAGK ISSLFSRLFGKKQMRILMVGLDAAGKTTIL KQMRILMVGLDAAGKTTILYKLKLGEIVTT R I L G K T 2 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 0 0 0 1 0 0 11 0 1086.6107 P84085;P84077;P61204;P18085 P18085 20 30 ARF5;ARF1;ARF3;ARF4 ADP-ribosylation factor 5;ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 4 no no 2 0.00014853 147.2 By MS/MS By matching 9.4 0.49 3 2 4 1 13469000 13427000 42304 6599 651;1116;1244 6805;6806 16310;16311;16312;16313;16314 13232;13233;13234;13235 13232 324 4 325080 96466 ILNEMRDQYEK VNVEMDAAPGVDLSRILNEMRDQYEKMAEK DLSRILNEMRDQYEKMAEKNRKDAEEWFFT R I L E K M 0 1 1 1 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 11 1 1437.6922 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2 CON__P02533 283 293 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2 0.0015925 152.64 By MS/MS By MS/MS 4.92 2.87 1 2 2 2 1 1 1 1 1 4 8 9212100 2333100 6879000 + 6600 39;57 6807;6808 16315;16316;16317;16318;16319;16320;16321;16322;16323;16324;16325;16326 13236;13237;13238;13239 13238 18 3 181140 2189700 ILNEMRDQYEKMAEK VNVEMDAAPGVDLSRILNEMRDQYEKMAEK ILNEMRDQYEKMAEKNRKDAEEWFFTKTEE R I L E K N 1 1 1 1 0 1 3 0 0 1 1 2 2 0 0 0 0 0 1 0 0 0 15 2 1896.9074 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2 CON__P02533 283 297 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 3 0.011397 78.814 By MS/MS By MS/MS 4.43 2.44 1 1 1 1 1 1 1 1 6 2266800 1266400 1000400 + 6601 39;57 6809 16327;16328;16329;16330;16331;16332;16333 13240;13241;13242;13243 13243 18;19 4 119170 459900 ILNEMRDQYEQMAEK VNVEMDAAPGVDLSRILNEMRDQYEQMAEK ILNEMRDQYEQMAEKNRRDAETWFLSKTEE R I L E K N 1 1 1 1 0 2 3 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 15 1 1896.871 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 285 299 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.049013 54.094 By MS/MS 10 0 1 1 70849 0 70849 + 6602 47 6810 16334 13244 13244 31;32 1 0 90706 ILNFGQVK PVCGLHSVISPSDGRILNFGQVKNCEVEQV ISPSDGRILNFGQVKNCEVEQVKGVTYSLE R I L V K N 0 0 1 0 0 1 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 917.53345 Q9UG56 Q9UG56 194 201 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.013901 106.42 By MS/MS 7.5 0.5 1 1 2 4453700 4453700 0 6603 2718 6811 16335;16336 13245 13245 1 60599 0 ILNIFGVIK KNVKLTVSNVLKEIKILNIFGVIKGFVEPD VLKEIKILNIFGVIKGFVEPDHYVVVGAQR K I L I K G 0 0 1 0 0 0 0 1 0 3 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1015.643 P02786 P02786 386 394 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0059292 107.59 By MS/MS 5.33 1.25 1 1 1 3 91853 91853 0 6604 458 6812 16337;16338;16339 13246;13247 13247 2 4470.9 0 ILNNSGLPITSAIDLEDAAK LVVRLEGTNVQEAQKILNNSGLPITSAIDL GLPITSAIDLEDAAKKAVASVAKK______ K I L A K K 3 0 2 2 0 0 1 1 0 3 3 1 0 0 1 2 1 0 0 0 0 0 20 0 2054.0895 Q96I99 Q96I99 404 423 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.0001937 146.27 By MS/MS 7 0 1 1 110250 110250 0 6605 2172 6813 16340 13248 13248 1 1730.8 0 ILNSQSSK LRLIQVIRSVEKIEKILNSQSSKETSALEA SVEKIEKILNSQSSKETSALEASSPLLTGQ K I L S K E 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 3 0 0 0 0 0 0 8 0 875.47125 Q14746 Q14746 146 153 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 2 0.024748 104.06 By MS/MS 5 0 1 1 0 0 0 6606 1457 6814 16341 13249 13249 1 0 0 ILPEYLSNWTMEK TEVIQLFPEKGNMGKILPEYLSNWTMEKVR GKILPEYLSNWTMEKVRREGVKVMPNAIVQ K I L E K V 0 0 1 0 0 0 2 0 0 1 2 1 1 0 1 1 1 1 1 0 0 0 13 0 1622.8014 O95831 O95831 343 355 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.1014E-07 211.37 By MS/MS 5 0 1 1 1234300 1234300 0 6607 429 6815 16342 13250 13250 162 1 12380 0 ILPTLEAVAALGNK MTTGHNVADLVVILKILPTLEAVAALGNKV KILPTLEAVAALGNKVVESLRAQDPSEVLT K I L N K V 3 0 1 0 0 0 1 1 0 1 3 1 0 0 1 0 1 0 0 1 0 0 14 0 1408.829 Q12905 Q12905 128 141 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 0.00056465 160.91 By MS/MS 7 0 1 1 377180 377180 0 6608 1338 6816 16343 13251 13251 1 5921.1 0 ILPVAASYSAVTR VDPNLDLSIRELVHRILPVAASYSAVTRFI HRILPVAASYSAVTRFIEEKSSFEYGQVNH R I L T R F 3 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 1 0 1 2 0 0 13 0 1346.7558 Q9BSJ2 Q9BSJ2 263 275 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00017382 165.63 By MS/MS 4.5 0.5 1 1 2 8705400 8705400 0 6609 2307 6817 16344;16345 13252 13252 1 726750 0 ILPVLCGLTVDPEK AATHNLYSMNDCAQKILPVLCGLTVDPEKS KILPVLCGLTVDPEKSVRDQAFKAIRSFLS K I L E K S 0 0 0 1 1 0 1 1 0 1 3 1 0 0 2 0 1 0 0 2 0 0 14 0 1552.8535 Q96KG9 Q96KG9 507 520 SCYL1 N-terminal kinase-like protein yes yes 2 0.00042658 150.09 By MS/MS 5.5 1.12 1 1 1 1 4 7521600 7521600 0 6610 2188 6818 16346;16347;16348;16349 13253;13254 13254 2 154100 0 ILQAVNFPFLVK VVKLKQIEHTLNEKRILQAVNFPFLVKLEF EKRILQAVNFPFLVKLEFSFKDNSNLYMVM R I L V K L 1 0 1 0 0 1 0 0 0 1 2 1 0 2 1 0 0 0 0 2 0 0 12 0 1387.8228 P17612 P17612 95 106 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 2 5.4338E-05 166.09 By MS/MS 7 0 1 1 52872 52872 0 6611 644 6819 16350 13255 13255 1 829.99 0 ILQDGGLQVVEK RKVLISDSLDPCCRKILQDGGLQVVEKQNL CRKILQDGGLQVVEKQNLSKEELIAELQDC K I L E K Q 0 0 0 1 0 2 1 2 0 1 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1297.7242 O43175 O43175 22 33 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.6064E-06 211.63 By MS/MS By MS/MS 7.4 1.5 2 1 1 1 4 1 14797000 14660000 136670 6612 195 6820 16351;16352;16353;16354;16355 13256;13257;13258 13257 3 135410 140050 ILQDSLGGNCR EGSTYVPYRDSKMTRILQDSLGGNCRTTIV KMTRILQDSLGGNCRTTIVICCSPSSYNES R I L C R T 0 1 1 1 1 1 0 2 0 1 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1231.5979 P33176;Q12840;O60282 P33176 285 295 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 0.00012104 150.04 By MS/MS 3.5 0.5 1 1 2 5698500 5698500 0 6613 800 6821 16356;16357 13259;13260;13261 13260 3 501090 0 ILQDSLGGR ERTPHVPYRESKLTRILQDSLGGRTRTSII ESKLTRILQDSLGGRTRTSIIATISPASLN R I L G R T 0 1 0 1 0 1 0 2 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 957.52434 P52732 P52732 319 327 KIF11 Kinesin-like protein KIF11 yes yes 2 0.0023381 117.01 By MS/MS 3 0 1 1 746410 746410 0 6614 1021 6822 16358 13262 13262 1 13657 0 ILQDVADEEIAALPR RLRINSLRKNTILPKILQDVADEEIAALPR ILQDVADEEIAALPRDSCPVRIRNRCVMTS K I L P R D 3 1 0 2 0 1 2 0 0 2 2 0 0 0 1 0 0 0 0 1 0 0 15 0 1651.8781 O60783 O60783 66 80 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2;3 0.00024009 174.94 By MS/MS By matching 10 0 3 2 1 2096600 2036700 59893 6615 277 6823 16359;16360;16361 13263;13264;13265 13263 3 109770 76680 ILQEDPTNTAAR EAMERYDDAIQLYDRILQEDPTNTAARKRK YDRILQEDPTNTAARKRKIAIRKAQGKNVE R I L A R K 2 1 1 1 0 1 1 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 12 0 1327.6732 Q15006 Q15006 113 124 EMC2 ER membrane protein complex subunit 2 yes yes 2 1.7705E-05 177.57 By MS/MS 7.5 0.5 1 1 2 7622000 7622000 0 6616 1470 6824 16362;16363 13266 13266 1 97157 0 ILQEGVDPK YTTRCLAPMMSEVIRILQEGVDPKKLDSLT MSEVIRILQEGVDPKKLDSLTTSFGFPVGA R I L P K K 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 9 0 997.54441 P40939 P40939 561 569 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0043415 93.111 By MS/MS By matching 5 0 2 1 1 15645000 15558000 87355 6617 865 6825 16364;16365 13267 13267 1 156040 73359 ILQEHEQIK EERLRQEAKEREKERILQEHEQIKKKTVRE EREKERILQEHEQIKKKTVRERLEQIKKTE R I L I K K 0 0 0 0 0 2 2 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1136.619 Q14152 Q14152 624 632 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 4.8645E-05 161.79 By MS/MS By matching 3.33 1.25 1 1 3 2 2 8 1 51965000 51865000 99957 6618 1422 6826 16366;16367;16368;16369;16370;16371;16372;16373;16374 13268;13269;13270;13271 13268 4 1490800 12723 ILQEHEQIKK EERLRQEAKEREKERILQEHEQIKKKTVRE REKERILQEHEQIKKKTVRERLEQIKKTEL R I L K K K 0 0 0 0 0 2 2 0 1 2 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1264.7139 Q14152 Q14152 624 633 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3;4 2.159E-07 185.6 By MS/MS 3.2 1.25 1 2 3 2 2 10 17811000 17811000 0 6619 1422 6827 16375;16376;16377;16378;16379;16380;16381;16382;16383;16384 13272;13273;13274;13275;13276 13273 5 660350 0 ILQEHEQIKKK EERLRQEAKEREKERILQEHEQIKKKTVRE EKERILQEHEQIKKKTVRERLEQIKKTELG R I L K K T 0 0 0 0 0 2 2 0 1 2 1 3 0 0 0 0 0 0 0 0 0 0 11 2 1392.8089 Q14152 Q14152 624 634 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 7.9206E-06 172.98 By MS/MS 3.5 0.957 1 2 2 1 6 19679000 19679000 0 6620 1422 6828 16385;16386;16387;16388;16389;16390 13277;13278;13279 13278 3 620460 0 ILQEIESTDTACVGPTLR AENSESLGTVPEHERILQEIESTDTACVGP EIESTDTACVGPTLRSVYDDQPNAHKKFME R I L L R S 1 1 0 1 1 1 2 1 0 2 2 0 0 0 1 1 3 0 0 1 0 0 18 0 2002.0041 Q8TAG9 Q8TAG9 17 34 EXOC6 Exocyst complex component 6 yes yes 2 2.4764E-11 238.64 By MS/MS 4 0 1 1 2427100 2427100 0 6621 1975 6829 16391 13280;13281 13281 2 228400 0 ILQINKDDVTALHCK GQNGDFTRALKTVNKILQINKDDVTALHCK ILQINKDDVTALHCKVVCLIQNGSFKEALN K I L C K V 1 0 1 2 1 1 0 0 1 2 2 2 0 0 0 0 1 0 0 1 0 0 15 1 1766.9349 O76094 O76094 37 51 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.00022468 136.83 By MS/MS 5 0 1 1 2617500 2617500 0 6622 362 6830 16392 13282;13283 13282 2 26253 0 ILQKAEDLCR ACALIGQGQLNQAMKILQKAEDLCRRSLSE NQAMKILQKAEDLCRRSLSEDTDGTEEDPQ K I L C R R 1 1 0 1 1 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 1 1244.6547 O76094 O76094 198 207 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.014178 110.38 By MS/MS 5 0 1 1 1067000 1067000 0 6623 362 6831 16393 13284 13284 1 10701 0 ILQLVATGAVR YGRLNLHYAVVSKRKILQLVATGAVRDWDD SKRKILQLVATGAVRDWDDPRLFTLTALRR K I L V R D 2 1 0 0 0 1 0 1 0 1 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1139.7026 P47897 P47897 499 509 QARS Glutamine--tRNA ligase yes yes 2 1.5642E-05 167.93 By MS/MS 4 0 1 1 714010 714010 0 6624 928 6832 16394 13285 13285 1 67193 0 ILQNYDNK KDVGQWKERGIGDIKILQNYDNKQVRIVMR RGIGDIKILQNYDNKQVRIVMRRDQVLKLC K I L N K Q 0 0 2 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1006.5084 P49792;P0DJD0;P0DJD1;Q7Z3J3;A6NKT7;Q99666;O14715 P49792 2359 2366 RANBP2;RGPD1;RGPD2;RGPD4;RGPD3;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 0.025855 93.143 By MS/MS 1.5 0.5 1 1 2 160460 160460 0 6625 964 6833 16395;16396 13286 13286 1 48489 0 ILREEGPK AGQTTYSGVIDCFRKILREEGPKALWKGAG VIDCFRKILREEGPKALWKGAGARVFRSSP K I L P K A 0 1 0 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 8 1 940.53418 Q9UJS0 Q9UJS0 569 576 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.031408 119.21 By MS/MS 5 0 1 1 9768500 9768500 0 6626 2748 6834 16397 13287 13287 1 97973 0 ILSEVTPDQSKPEN EKIVLTHNRLKSLMKILSEVTPDQSKPEN_ KILSEVTPDQSKPEN_______________ K I L E N - 0 0 1 1 0 1 2 0 0 1 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1555.773 O43482 O43482 216 229 OIP5 Protein Mis18-beta yes yes 2 0.0015476 188.27 By MS/MS 9 0 1 1 172850 172850 0 6627 213 6835 16398 13288 13288 1 3401.7 0 ILSFVYPIR GNFDSQVGACGFNSRILSFVYPIRLVRVNE CGFNSRILSFVYPIRLVRVNEDTMELIRGP R I L I R L 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 1 0 0 9 0 1106.6488 Q6P1M0 Q6P1M0 409 417 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.018107 89.752 By MS/MS 7.5 0.5 1 1 2 119080 119080 0 6628 1700 6836 16399;16400 13289 13289 1 1738.8 0 ILSGVVTK DKKCPFTGNVSIRGRILSGVVTKMKMQRTI NVSIRGRILSGVVTKMKMQRTIVIRRDYLH R I L T K M 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 2 0 0 8 0 815.51165 P62280 P62280 72 79 RPS11 40S ribosomal protein S11 yes yes 2 0.023363 95.909 By MS/MS By matching 9.33 0.471 2 1 2 1 14499000 14368000 130670 6629 1152 6837 16401;16402;16403 13290 13290 1 309580 297970 ILSIAAEVAK ______________________________ GTDPRILSIAAEVAKSPEQNVPVILLKLKE R I L A K S 3 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1013.6121 Q15051 Q15051 10 19 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.00037458 135.71 By MS/MS 5 0 1 1 855520 855520 0 6630 1482 6838 16404 13291 13291 1 8580.4 0 ILSLLEGQK SPDYERIINLRHFKRILSLLEGQKIAFGGE LRHFKRILSLLEGQKIAFGGETDEATRYIA R I L Q K I 0 0 0 0 0 1 1 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 999.59645 P51648 P51648 291 299 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 1.8075E-07 199.02 By MS/MS 7 0.816 1 1 1 3 12479000 12479000 0 6631 1002 6839 16405;16406;16407 13292;13293;13294 13294 3 100250 0 ILSVQGTEPLVLFK LDKVFKATLSAEVYRILSVQGTEPLVLFKE RILSVQGTEPLVLFKEGAVRGLEALLADPQ R I L F K E 0 0 0 0 0 1 1 1 0 1 3 1 0 1 1 1 1 0 0 2 0 0 14 0 1542.9021 Q9H8H0 Q9H8H0 112 125 NOL11 Nucleolar protein 11 yes yes 2 0.00014365 177.04 By MS/MS 5 0 1 1 103800 103800 0 6632 2475 6840 16408 13295;13296 13295 2 1041.1 0 ILTAATDACR LDYSRDGLARVILSKILTAATDACRLYATK VILSKILTAATDACRLYATKHLRVLLRANV K I L C R L 3 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1090.5441 Q6R327 Q6R327 720 729 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.001315 117.53 By MS/MS 2 0 1 1 251680 251680 0 6633 1724 6841 16409 13297 13297 1 85128 0 ILTFDQLALDSPK VTSRARSRILRAGGKILTFDQLALDSPKGC GKILTFDQLALDSPKGCGTVLLSGPRKGRE K I L P K G 1 0 0 2 0 1 0 0 0 1 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1459.7922 Q07020 Q07020 120 132 RPL18 60S ribosomal protein L18 yes yes 2 4.5163E-33 298.84 By MS/MS 8.5 0.5 1 1 2 7271800 7271800 0 6634 1298 6842 16410;16411 13298;13299;13300 13299 3 116280 0 ILTGGADKNVVVFDK PGILALDLCPSDTNKILTGGADKNVVVFDK ILTGGADKNVVVFDKSSEQILATLKGHTKK K I L D K S 1 0 1 2 0 0 0 2 0 1 1 2 0 1 0 0 1 0 0 3 0 0 15 1 1574.8668 Q9UMS4 Q9UMS4 237 251 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.0025206 149.57 By MS/MS 6 0 1 1 3394200 3394200 0 6635 2782 6843 16412 13301 13301 1 23333 0 ILTGLNYEAPK ITNDEPIPFWTFLSRILTGLNYEAPKYHIP FLSRILTGLNYEAPKYHIPYWVAYYLALLL R I L P K Y 1 0 1 0 0 0 1 1 0 1 2 1 0 0 1 0 1 0 1 0 0 0 11 0 1217.6656 Q15738 Q15738 282 292 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.050329 52.167 By MS/MS 7 0 1 1 3086000 3086000 0 6636 1526 6844 16413 13302 13302 0 48445 0 ILTGTDAPK MSDLPVKVIHVESGKILTGTDAPKAGQLEA HVESGKILTGTDAPKAGQLEAWLEMNPGYE K I L P K A 1 0 0 1 0 0 0 1 0 1 1 1 0 0 1 0 2 0 0 0 0 0 9 0 914.5073 P51532 P51532 627 635 SMARCA4 Transcription activator BRG1 yes yes 2 0.046831 77.318 By MS/MS 2 0 1 1 359810 359810 0 6637 995 6845 16414 13303 13303 1 121700 0 ILTLTYVDK LDNQFELVFVVGFQKILTLTYVDKLIDDVH VVGFQKILTLTYVDKLIDDVHRLFRDKYRT K I L D K L 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 2 0 1 1 0 0 9 0 1064.6118 P08240 P08240 73 81 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.00066887 141.52 By MS/MS 5 0 1 1 1415600 1415600 0 6638 522 6846 16415 13304 13304 1 14198 0 ILTPIIFKEENLR RDRMIQVYFPKEGRKILTPIIFKEENLRTM RKILTPIIFKEENLRTMYSQDRHVDVLNLC K I L L R T 0 1 1 0 0 0 2 0 0 3 2 1 0 1 1 0 1 0 0 0 0 0 13 1 1584.9239 P82650 P82650 204 216 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.0015892 150.09 By MS/MS 7 0 1 1 1427400 1427400 0 6639 1229 6847 16416 13305 13305 1 22408 0 ILTTIEDLDQKK DLMKKKRIVENDKSKILTTIEDLDQKKNQA KSKILTTIEDLDQKKNQALNIAWQKVNKDF K I L K K N 0 0 0 2 0 1 1 0 0 2 2 2 0 0 0 0 2 0 0 0 0 0 12 1 1415.7872 O95347 O95347 1015 1026 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.032391 70.728 By MS/MS 3 0 1 1 500910 500910 0 6640 405 6848 16417 13306 13306 1 9165.3 0 ILVADSLSLLK QDYNLQILLREGCKKILVADSLSLLKKMHR GCKKILVADSLSLLKKMHRTQMKGVLVDEE K I L L K K 1 0 0 1 0 0 0 0 0 1 4 1 0 0 0 2 0 0 0 1 0 0 11 0 1170.7224 P49754 P49754 763 773 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 2 0.0051401 103.55 By MS/MS 4 0 1 1 91710 91710 0 6641 960 6849 16418 13307 13307 1 8630.5 0 ILVAEGTR ATVGFESLEECYMAKILVAEGTRDVPIGAI EECYMAKILVAEGTRDVPIGAIICITVGKP K I L T R D 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 857.49707 P10515 P10515 148 155 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0127 116.9 By MS/MS By MS/MS 4.67 0.471 1 2 1 2 5951800 5353900 597890 6642 561 6850 16419;16420;16421 13308;13309 13308 2 53697 668800 ILVAQGGLGGK ENGKIIGELNKENDRILVAQGGLGGKLLTN ENDRILVAQGGLGGKLLTNFLPLKGQKRII R I L G K L 1 0 0 0 0 1 0 4 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1011.6077 A4D1E9 A4D1E9 116 126 GTPBP10 GTP-binding protein 10 yes yes 2 0.0043929 105.52 By MS/MS 7 0 1 1 6429700 6429700 0 6643 15 6851 16422 13310 13310 1 100930 0 ILVATNLFGR ERLSRYQQFKDFQRRILVATNLFGRGMDIE DFQRRILVATNLFGRGMDIERVNIVFNYDM R I L G R G 1 1 1 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1102.6499 O00148;Q13838 O00148 339 348 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 1.2725E-07 189.38 By MS/MS 7.33 1.25 1 1 1 3 2163900 2163900 0 6644 83 6852 16423;16424;16425 13311;13312 13311 2 16247 0 ILVAVVK EKQTRTASDMVSTSRILVAVVKMCYEAKEW SDMVSTSRILVAVVKMCYEAKEWDLLNENI R I L V K M 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 3 0 0 7 0 740.51601 O00232 O00232 66 72 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.015908 120.06 By MS/MS 6 0 1 1 6225300 6225300 0 6645 94 6853 16426 13313 13313 1 42794 0 ILVEDELSSPVVVFR SQRLQESLKKVNYIKILVEDELSSPVVVFR ILVEDELSSPVVVFRFFQELPGSDPVFKAV K I L F R F 0 1 0 1 0 0 2 0 0 1 2 0 0 1 1 2 0 0 0 4 0 0 15 0 1700.9349 Q6P996;Q6P474 Q6P996 379 393 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 2 0.00010142 181.66 By MS/MS 4 0 1 1 267670 267670 0 6646 1715 6854 16427 13314 13314 1 25190 0 ILVGTNLVR SRDREKRERERQELRILVGTNLVRLSQLEG ERQELRILVGTNLVRLSQLEGVNVERYKQI R I L V R L 0 1 1 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 2 0 0 9 0 983.61277 Q96QK1 Q96QK1 218 226 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0002466 154.49 By MS/MS 6 1.41 1 1 1 1 1 5 13675000 13675000 0 6647 2217 6855 16428;16429;16430;16431;16432 13315;13316 13315 2 165050 0 ILVKKEELTLEGIR DVLEVTKKFMRDPIRILVKKEELTLEGIRQ RILVKKEELTLEGIRQFYINVEREEWKLDT R I L I R Q 0 1 0 0 0 0 3 1 0 2 3 2 0 0 0 0 1 0 0 1 0 0 14 2 1639.9873 P60842 P60842 234 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 7.0993E-16 253.42 By MS/MS 6.12 2.17 1 1 1 2 4 3 3 2 17 538430000 538430000 0 6648 1097 6856 16433;16434;16435;16436;16437;16438;16439;16440;16441;16442;16443;16444;16445;16446;16447;16448;16449 13317;13318;13319;13320;13321;13322;13323;13324;13325;13326;13327;13328;13329 13325 12 4138600 0 ILYEGTHLDPER QRIQERIAREEIKKKILYEGTHLDPERKHN KKKILYEGTHLDPERKHNGSSSN_______ K I L E R K 0 1 0 1 0 0 2 1 1 1 2 0 0 0 1 0 1 0 1 0 0 0 12 0 1441.7201 Q5RI15 Q5RI15 99 110 COX20 Cytochrome c oxidase protein 20 homolog yes yes 3 0.037699 72.434 By MS/MS 10 0 1 1 479470 479470 0 6649 1616 6857 16450 13330 13330 1 25842 0 ILYIVASDPYSR GQNSCGVEDVLQLLRILYIVASDPYSRISQ LLRILYIVASDPYSRISQEDGDEQLQFTFP R I L S R I 1 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 0 0 2 1 0 0 12 0 1395.7398 Q9ULT8 Q9ULT8 2006 2017 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 1.6937E-12 232.72 By MS/MS 3 1.41 1 1 1 1 1 5 1745500 1745500 0 6650 2774 6858 16451;16452;16453;16454;16455 13331;13332;13333 13332 3 340960 0 ILYMTDEVNDPSLTIK LPAIILVLIALPSLRILYMTDEVNDPSLTI LYMTDEVNDPSLTIKSIGHQWYWTYEYTDY R I L I K S 0 0 1 2 0 0 1 0 0 2 2 1 1 0 1 1 2 0 1 1 0 0 16 0 1850.9336 P00403 P00403 83 98 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 2.1895E-33 309.35 By MS/MS 9 0 2 2 1981000 1981000 0 6651 444 6859;6860 16456;16457 13334;13335;13336 13334 167 3 38987 0 ILYYSGYTR IMAHIDAGKTTTTERILYYSGYTRSLGDVD TTTTERILYYSGYTRSLGDVDDGDTVTDFM R I L T R S 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 1 1 0 3 0 0 0 9 0 1134.571 Q969S9 Q969S9 90 98 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.040253 80.165 By MS/MS 4.5 0.5 1 1 2 1623800 1623800 0 6652 2095 6861 16458;16459 13337 13337 1 88292 0 IMASSPDMDLATVSALR LAKGFTAAGVLAAHKIMASSPDMDLATVSA ASSPDMDLATVSALRKMGVKLTPHNKETVQ K I M L R K 3 1 0 2 0 0 0 0 0 1 2 0 2 0 1 3 1 0 0 1 0 0 17 0 1776.875 P32322 P32322 30 46 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 3.6406E-11 239.03 By MS/MS 8 0 2 2 1271900 1271900 0 6653 797 6862;6863 16460;16461 13338;13339 13338 393 2 16058 0 IMASSPDMDLATVSALRK LAKGFTAAGVLAAHKIMASSPDMDLATVSA SSPDMDLATVSALRKMGVKLTPHNKETVQH K I M R K M 3 1 0 2 0 0 0 0 0 1 2 1 2 0 1 3 1 0 0 1 0 0 18 1 1904.97 P32322 P32322 30 47 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.047723 56.25 By MS/MS 8 0 1 1 795450 795450 0 6654 797 6864 16462 13340 13340 393 1 10042 0 IMDPNIVGSEHYDVAR LGIYPAVDPLDSTSRIMDPNIVGSEHYDVA MDPNIVGSEHYDVARGVQKILQDYKSLQDI R I M A R G 1 1 1 2 0 0 1 1 1 2 0 0 1 0 1 1 0 0 1 2 0 0 16 0 1814.8621 P06576 P06576 407 422 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 0.00010018 185.66 By MS/MS By matching 7.54 1.5 5 2 2 2 2 12 1 109740000 109710000 37212 6655 497 6865;6866 16463;16464;16465;16466;16467;16468;16469;16470;16471;16472;16473;16474;16475 13341;13342;13343;13344;13345;13346;13347;13348 13342 198 8 939480 38132 IMEGPAFNFLDAPAVR GGWPQFGVGAEICARIMEGPAFNFLDAPAV MEGPAFNFLDAPAVRVTGADVPMPYAKILE R I M V R V 3 1 1 1 0 0 1 1 0 1 1 0 1 2 2 0 0 0 0 1 0 0 16 0 1746.8763 P11177 P11177 309 324 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2;3 2.5377E-17 267.93 By MS/MS By matching 7.88 1.05 4 2 1 1 7 1 13418000 13392000 26488 6656 575 6867;6868 16476;16477;16478;16479;16480;16481;16482;16483 13349;13350;13351;13352;13353;13354;13355;13356 13351 266 8 202750 47704 IMENNLENELK ALDEHLFPVRIGDMRIMENNLENELKSSIS GDMRIMENNLENELKSSISALNSSQLEPVV R I M L K S 0 0 3 0 0 0 3 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 11 0 1345.6548 Q96N67 Q96N67 761 771 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 3.1883E-09 211.86 By MS/MS 2.2 0.748 1 2 2 5 4008200 4008200 0 6657 2201 6869;6870 16484;16485;16486;16487;16488 13357;13358;13359 13357 1031 3 1172700 0 IMFEVQDLK TLPNGERLSLPPNVRIMFEVQDLKYATLAT LPPNVRIMFEVQDLKYATLATVSRCGMVWF R I M L K Y 0 0 0 1 0 1 1 0 0 1 1 1 1 1 0 0 0 0 0 1 0 0 9 0 1121.5791 Q14204 Q14204 2341 2349 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0032501 112.11 By MS/MS 1.5 0.5 2 2 4 2022400 2022400 0 6658 1433 6871;6872 16489;16490;16491;16492 13360;13361;13362;13363 13360 830 4 593830 0 IMGIPEEEQMGLLR QQDKDMFQETMEAMRIMGIPEEEQMGLLRV RIMGIPEEEQMGLLRVISGVLQLGNIVFKK R I M L R V 0 1 0 0 0 1 3 2 0 2 2 0 2 0 1 0 0 0 0 0 0 0 14 0 1614.8109 P35579 P35579 328 341 MYH9 Myosin-9 yes yes 2 0.00067814 120.86 By MS/MS 2 0 2 2 544490 544490 0 6659 824 6873;6874 16493;16494 13364;13365 13364 410;411 2 184170 0 IMGPNYTPGK GRVFSGLVSTGLKVRIMGPNYTPGKKEDLY GLKVRIMGPNYTPGKKEDLYLKPIQRTILM R I M G K K 0 0 1 0 0 0 0 2 0 1 0 1 1 0 2 0 1 0 1 0 0 0 10 0 1076.5325 P13639 P13639 429 438 EEF2 Elongation factor 2 yes yes 2 0.036315 78.939 By MS/MS 4.5 0.5 1 1 2 2347500 2347500 0 6660 602 6875 16495;16496 13366;13367 13366 2 198890 0 IMKDILEK KKQEEKKTKFENLCKIMKDILEKKVEKVVV KFENLCKIMKDILEKKVEKVVVSNRLVTSP K I M E K K 0 0 0 1 0 0 1 0 0 2 1 2 1 0 0 0 0 0 0 0 0 0 8 1 988.5627 P07900 P07900 574 581 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.0024721 131.5 By MS/MS 4 0 1 1 1854700 1854700 0 6661 513 6876 16497 13368 13368 1 174540 0 IMLKGDNITLLQSVSN EEIHSKTKSRKQLGRIMLKGDNITLLQSVS MLKGDNITLLQSVSN_______________ R I M S N - 0 0 2 1 0 1 0 1 0 2 3 1 1 0 0 2 1 0 0 1 0 0 16 1 1744.9393 P62304 P62304 77 92 SNRPE Small nuclear ribonucleoprotein E yes yes 2 0.032565 151.16 By MS/MS 10 0 1 1 474590 474590 0 6662 1153 6877 16498 13369 13369 656 1 25579 0 IMLNTPEDVQALVSGK SPKAITSLKYMLLCKIMLNTPEDVQALVSG MLNTPEDVQALVSGKLALRYAGRQTEALKC K I M G K L 1 0 1 1 0 1 1 1 0 1 2 1 1 0 1 1 1 0 0 2 0 0 16 0 1713.8971 O00231 O00231 259 274 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 4.4368E-11 237.07 By MS/MS 6.67 0.471 1 2 3 1418900 1418900 0 6663 93 6878;6879 16499;16500;16501 13370;13371 13370 58 2 18164 0 IMLPWDPTGK RHVLLRQGVLGIKVKIMLPWDPTGKIGPKK GIKVKIMLPWDPTGKIGPKKPLPDHVSIVE K I M G K I 0 0 0 1 0 0 0 1 0 1 1 1 1 0 2 0 1 1 0 0 0 0 10 0 1156.5951 P23396 P23396 188 197 RPS3 40S ribosomal protein S3 yes yes 2 0.0099922 93.598 By MS/MS 7.5 0.5 1 1 2 1902400 1902400 0 6664 703 6880 16502;16503 13372 13372 350 1 24326 0 IMNTFSVVPSPK GTLLISKIREEYPDRIMNTFSVVPSPKVSD PDRIMNTFSVVPSPKVSDTVVEPYNATLSV R I M P K V 0 0 1 0 0 0 0 0 0 1 0 1 1 1 2 2 1 0 0 2 0 0 12 0 1318.6955 P04350;P68371;P07437;Q13509 P68371 163 174 TUBB4A;TUBB4B;TUBB;TUBB3 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain no no 2 1.6489E-12 233.13 By MS/MS By MS/MS 6.36 2.58 1 1 1 3 3 2 2 1 12 2 94439000 94001000 438060 6665 1212;509;472;1393 6881;6882 16504;16505;16506;16507;16508;16509;16510;16511;16512;16513;16514;16515;16516;16517 13373;13374;13375;13376;13377;13378;13379;13380;13381;13382;13383;13384;13385;13386;13387;13388;13389 13388 176;208 16 818540 484490 IMNVIGEPIDER GAPIKIPVGPETLGRIMNVIGEPIDERGPI LGRIMNVIGEPIDERGPIKTKQFAPIHAEA R I M E R G 0 1 1 1 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 1 0 0 12 0 1384.7021 P06576 P06576 144 155 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 2.6796E-05 196.44 By MS/MS By MS/MS 6.57 0.728 4 2 1 5 2 45210000 44803000 406710 6666 497 6883;6884 16518;16519;16520;16521;16522;16523;16524 13390;13391;13392;13393;13394;13395;13396;13397 13395 199 8 363100 416760 IMNVIGEPIDERGPIK GAPIKIPVGPETLGRIMNVIGEPIDERGPI MNVIGEPIDERGPIKTKQFAPIHAEAPEFM R I M I K T 0 1 1 1 0 0 2 2 0 4 0 1 1 0 2 0 0 0 0 1 0 0 16 1 1779.9553 P06576 P06576 144 159 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 9.9921E-11 243.37 By MS/MS By matching 6.9 0.831 4 3 3 9 1 53550000 53475000 75408 6667 497 6885;6886 16525;16526;16527;16528;16529;16530;16531;16532;16533;16534 13398;13399;13400;13401;13402 13401 199 4 433730 77272 IMNVIGEPIDERGPIKTK GAPIKIPVGPETLGRIMNVIGEPIDERGPI VIGEPIDERGPIKTKQFAPIHAEAPEFMEM R I M T K Q 0 1 1 1 0 0 2 2 0 4 0 2 1 0 2 0 1 0 0 1 0 0 18 2 2009.0979 P06576 P06576 144 161 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3 0.0041579 93.51 By MS/MS 6 0 1 1 3150300 3150300 0 6668 497 6887 16535 13403 13403 1 21656 0 IMQEYQLEQK LNNHKLFPETWTAEKIMQEYQLEQKDVNSL WTAEKIMQEYQLEQKDVNSLLKYFVTFEVE K I M Q K D 0 0 0 0 0 3 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 10 0 1308.6384 Q9P032 Q9P032 138 147 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 1.3186E-07 188.87 By MS/MS 9 0 2 2 4005700 4005700 0 6669 2660 6888;6889 16536;16537 13404;13405 13405 1130 2 78833 0 IMRNMLSK DRSVVTVAHLRPVPRIMRNMLSKLQIACDN HLRPVPRIMRNMLSKLQIACDNAVFGCSAV R I M S K L 0 1 1 0 0 0 0 0 0 1 1 1 2 0 0 1 0 0 0 0 0 0 8 1 991.53069 Q9H4P4 Q9H4P4 71 78 RNF41 E3 ubiquitin-protein ligase NRDP1 yes yes 2 0.033275 77.282 By MS/MS 4 0 1 1 0 0 0 6670 2450 6890 16538 13406 13406 1097;1098 1 0 0 IMSSPLSK NRKRHFNAPSHIRRKIMSSPLSKELRQKYN PSHIRRKIMSSPLSKELRQKYNVRSMPIRK K I M S K E 0 0 0 0 0 0 0 0 0 1 1 1 1 0 1 3 0 0 0 0 0 0 8 0 861.46299 P61254;Q9UNX3 P61254 29 36 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.045143 83.753 By MS/MS 9 0 1 1 794990 794990 0 6671 1119;2794 6891 16539 13407 13407 636 1 15646 0 IMVANIEEVLQR RNLGSINTELQDVQRIMVANIEEVLQRGEA VQRIMVANIEEVLQRGEALSALDSKANNLS R I M Q R G 1 1 1 0 0 1 2 0 0 2 1 0 1 0 0 0 0 0 0 2 0 0 12 0 1413.765 O75396 O75396 148 159 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 4.8862E-35 289.67 By MS/MS 8.67 0.471 1 2 3 852400 852400 0 6672 323 6892;6893 16540;16541;16542 13408;13409;13410 13410 135 3 13692 0 IMVIKDIEREDIEFICK DALSDLALHFLNKMKIMVIKDIEREDIEFI VIKDIEREDIEFICKTIGTKPVAHIDQFTA K I M C K T 0 1 0 2 1 0 3 0 0 5 0 2 1 1 0 0 0 0 0 1 0 0 17 2 2150.1115 P50991 P50991 322 338 CCT4 T-complex protein 1 subunit delta yes yes 3 0.013929 88.78 By MS/MS 6 0 1 1 2073900 2073900 0 6673 985 6894 16543 13411 13411 541 1 14257 0 INAENEVPILK LFQNTGRAWEDLEARINAENEVPILKTSNK LEARINAENEVPILKTSNKEISSILKELRR R I N L K T 1 0 2 0 0 0 2 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 11 0 1238.6871 Q9Y4F5 Q9Y4F5 1476 1486 CEP170B Centrosomal protein of 170 kDa protein B yes yes 2 0.0034671 106.4 By MS/MS 2 0 1 1 135840 135840 0 6674 2894 6895 16544 13412 13412 1 45947 0 INAQLPLTDK LMRRNSLNRKDAEARINAQLPLTDKARMAR DAEARINAQLPLTDKARMARHVLDNSGEWS R I N D K A 1 0 1 1 0 1 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1111.6237 Q8WVC6 Q8WVC6 159 168 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 7.6792E-11 218.58 By MS/MS 9.5 0.5 1 1 2 8657900 8657900 0 6675 2024 6896 16545;16546 13413 13413 1 174300 0 INDLVEFPVR QLKRFSFRSFIWRDKINDLVEFPVRNLDLS IWRDKINDLVEFPVRNLDLSKFCIGQKEEQ K I N V R N 0 1 1 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 2 0 0 10 0 1200.6503 O94966 O94966 1121 1130 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.032219 80.916 By MS/MS 3 0 1 1 33645 33645 0 6676 379 6897 16547 13414 13414 1 615.62 0 INEAKDLLEGQAKK LNHPDKGGSPYIAAKINEAKDLLEGQAKK_ KINEAKDLLEGQAKK_______________ K I N K K - 2 0 1 1 0 1 2 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 14 2 1555.857 Q96DA6 Q96DA6 103 116 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 3 0.026898 98.592 By MS/MS 10 0 1 1 404030 404030 0 6677 2133 6898 16548 13415;13416 13415 2 21776 0 INEAVECLLSLK EVVRKLKAEKSPKAKINEAVECLLSLKAQY KAKINEAVECLLSLKAQYKEKTGKEYIPGQ K I N L K A 1 0 1 0 1 0 2 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1387.7381 P07814 P07814 850 861 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 4.5104E-07 202 By MS/MS 3.5 0.5 1 1 2 597620 597620 0 6678 512 6899 16549;16550 13417 13417 1 50727 0 INEAVNDLTK EVFEQRAEILSPLGRINEAVNDLTKAIQLQ SPLGRINEAVNDLTKAIQLQPSARLYRHRG R I N T K A 1 0 2 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 10 0 1115.5823 Q8NBP0 Q8NBP0 232 241 TTC13 Tetratricopeptide repeat protein 13 yes yes 2 0.011362 91.265 By MS/MS 4 0 1 1 1278000 1278000 0 6679 1942 6900 16551 13418 13418 1 120260 0 INEENTAISR SVHSRLGIIYNPTSKINEENTAISRGILAA NPTSKINEENTAISRGILAAFLTQKNMFLR K I N S R G 1 1 2 0 0 0 2 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1145.5677 Q9NYU1 Q9NYU1 783 792 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 5.6092E-08 197.21 By MS/MS 3.5 0.5 1 1 2 499440 499440 0 6680 2637 6901 16552;16553 13419 13419 1 21890 0 INEILSNALK MENMGRFGSGMNMGRINEILSNALKRGEII MNMGRINEILSNALKRGEIIAKQGGGGGGG R I N L K R 1 0 2 0 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1113.6394 P52272 P52272 372 381 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 1.4779E-05 171.33 By MS/MS By matching 5.75 0.829 2 1 1 3 1 6456600 6423500 33101 6681 1012 6902 16554;16555;16556;16557 13420 13420 1 63646 27798 INEINTEINQLIEK EPAMGHSDLLELESKINEINTEINQLIEKK KINEINTEINQLIEKKMMRNEPIEGKLSLY K I N E K K 0 0 3 0 0 1 3 0 0 4 1 1 0 0 0 0 1 0 0 0 0 0 14 0 1669.8887 Q8WYA0 Q8WYA0 316 329 IFT81 Intraflagellar transport protein 81 homolog yes yes 2 1.4171E-16 255.54 By MS/MS 5 0 1 1 225190 225190 0 6682 2043 6903 16558 13421 13421 1 2258.6 0 INELQAELQAFK DHQETQAELQKKEAKINELQAELQAFKSQF EAKINELQAELQAFKSQFGALPADCNIPLP K I N F K S 2 0 1 0 0 2 2 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1402.7456 Q9NSV4 Q9NSV4 537 548 DIAPH3 Protein diaphanous homolog 3 yes yes 2 1.8727E-12 231.07 By MS/MS 4 0.816 1 1 1 3 379660 379660 0 6683 2573 6904 16559;16560;16561 13422 13422 1 17157 0 INEMVHFDLPGQEER ASNQPEQFDWAINDRINEMVHFDLPGQEER INEMVHFDLPGQEERERLVRMYFDKYVLKP R I N E R E 0 1 1 1 0 1 3 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 15 0 1812.8465 Q9NVI7 Q9NVI7 515 529 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 3 0.00071349 123.68 By MS/MS 5 0 2 2 7142100 7142100 0 6684 2598 6905;6906 16562;16563 13423;13424 13423 1119 2 71631 0 INEMVHFDLPGQEERER ASNQPEQFDWAINDRINEMVHFDLPGQEER EMVHFDLPGQEERERLVRMYFDKYVLKPAT R I N E R L 0 2 1 1 0 1 4 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 17 1 2097.9902 Q9NVI7 Q9NVI7 515 531 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 3;4 0.00066821 119.54 By MS/MS 5 0 3 3 5895300 5895300 0 6685 2598 6907;6908 16564;16565;16566 13425;13426;13427 13426 1119 3 59127 0 INFDDNAEFR FGETPEGQVVCFDAKINFDDNAEFRQKDIF CFDAKINFDDNAEFRQKDIFAMDDKSENEP K I N F R Q 1 1 2 2 0 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 10 0 1239.552 Q96I99 Q96I99 260 269 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.031406 90.15 By MS/MS 7 0 1 1 2302300 2302300 0 6686 2172 6909 16567 13428 13428 0 36141 0 INFLSNNQCENIR PLSVLCCNLPEAKRRINFLSNNQCENIRRL RRINFLSNNQCENIRRLPSFRRYVEKQASE R I N I R R 0 1 4 0 1 1 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 13 0 1620.7678 Q9UBD5 Q9UBD5 355 367 ORC3 Origin recognition complex subunit 3 yes yes 2 1.631E-08 223.77 By MS/MS 5 0 1 1 855440 855440 0 6687 2696 6910 16568 13429 13429 1 8579.7 0 INGCAIQCR GRSLPDLGLRQENIRINGCAIQCRVTTEDP RQENIRINGCAIQCRVTTEDPARSFQPDTG R I N C R V 1 1 1 0 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1090.5012 P11498 P11498 369 377 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0010324 133.6 By MS/MS 3 0 1 1 163280 163280 0 6688 580 6911 16569 13430 13430 1 2987.5 0 INGDWQR CDRDQMYYNLLKLYKINGDWQRADAVWNKI YNLLKLYKINGDWQRADAVWNKIQEENVIP K I N Q R A 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 7 0 887.42496 P42704 P42704 967 973 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.018465 113.41 By MS/MS 3.5 0.5 1 1 2 2258000 2258000 0 6689 886 6912 16570;16571 13431 13431 1 62255 0 INGKDSIEKEHVEEISELFYDAK RYSVQLLTPANLLAKINGKDSIEKEHVEEI KEHVEEISELFYDAKSSAKILADQQDKYMK K I N A K S 1 0 1 2 0 0 5 1 1 3 1 3 0 1 0 2 0 0 1 1 0 0 23 2 2692.3232 Q9Y265 Q9Y265 419 441 RUVBL1 RuvB-like 1 yes yes 3;4 0.00061618 89.659 By MS/MS 6 0 2 2 2845600 2845600 0 6690 2815 6913 16572;16573 13432;13433 13433 2 19561 0 INHEGEVNR GGFGSVSGKIEIEIKINHEGEVNRARYMPQ IEIEIKINHEGEVNRARYMPQNPCIIATKT K I N N R A 0 1 2 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1066.5156 Q09028;Q16576 Q09028 121 129 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2;3 0.0061504 107.21 By MS/MS By matching 6.33 0.471 4 2 4 2 6401300 6360700 40661 6691 1318;1553 6914 16574;16575;16576;16577;16578;16579 13434;13435 13434 2 48709 41666 INISEGNCPER KGESVKKMREESGARINISEGNCPERIITL SGARINISEGNCPERIITLAGPTNAIFKAF R I N E R I 0 1 2 0 1 0 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 0 11 0 1287.5877 P57721;Q15365;Q15366 Q15366 47 57 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2 3.2948E-09 211.86 By MS/MS By MS/MS 7.71 1.28 1 3 1 1 1 6 1 42040000 41977000 63636 6692 1501;1500;1080 6915 16580;16581;16582;16583;16584;16585;16586 13436;13437;13438;13439;13440;13441 13438 6 669510 114610 INKELSDLAR ______________________________ MALKRINKELSDLARDPPAQCSAGPVGDDM R I N A R D 1 1 1 1 0 0 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 1 1157.6404 P61077 P61077 6 15 UBE2D3 Ubiquitin-conjugating enzyme E2 D3 yes yes 3 0.0065345 105.4 By MS/MS 10 0 1 1 196620 196620 0 6693 1107 6916 16587 13442 13442 1 10597 0 INKKHEDVK LMIVKKEKLATAQFKINKKHEDVKQYKRTV ATAQFKINKKHEDVKQYKRTVIEDCNKVQE K I N V K Q 0 0 1 1 0 0 1 0 1 1 0 3 0 0 0 0 0 0 0 1 0 0 9 2 1109.6193 Q9BZD4 Q9BZD4 359 367 NUF2 Kinetochore protein Nuf2 yes yes 2 0.028782 76.478 By MS/MS 6 0 1 1 0 0 0 6694 2375 6917 16588 13443 13443 1 0 0 INLAEDVLAWEHER AHQFPEVRFSMVHKRINLAEDVLAWEHERF RINLAEDVLAWEHERFAIRRLPAFTLSHLE R I N E R F 2 1 1 1 0 0 3 0 1 1 2 0 0 0 0 0 0 1 0 1 0 0 14 0 1693.8424 Q969V3 Q969V3 361 374 NCLN Nicalin yes yes 3 0.016779 84.734 By MS/MS 6 0 1 1 553940 553940 0 6695 2096 6918 16589 13444 13444 1 3807.9 0 INLIAPPR LRAGLNCSTENMPIKINLIAPPRYVMTTTT TENMPIKINLIAPPRYVMTTTTLERTEGLS K I N P R Y 1 1 1 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 8 0 892.54944 P05198 P05198 227 234 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.02232 97.068 By MS/MS 8 0.816 1 1 1 3 5260100 5260100 0 6696 489 6919 16590;16591;16592 13445 13445 1 81037 0 INLIDLAGSER EFVEGEEHDHRITSRINLIDLAGSERCSTA ITSRINLIDLAGSERCSTAHTNGDRLKEGV R I N E R C 1 1 1 1 0 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1199.651 Q15058 Q15058 599 609 KIF14 Kinesin-like protein KIF14 yes yes 2 0.00013419 163.46 By MS/MS 3 0.816 1 1 1 3 788930 788930 0 6697 1486 6920 16593;16594;16595 13446 13446 1 176210 0 INLPAPNPDHVGGYK GGVKPMGSEPVPKSRINLPAPNPDHVGGYK INLPAPNPDHVGGYKLAVATFAGIENKFGL R I N Y K L 1 0 2 1 0 0 0 2 1 1 1 1 0 0 3 0 0 0 1 1 0 0 15 0 1590.8154 Q9UJS0 Q9UJS0 627 641 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.041146 69.716 By MS/MS 5 0 1 1 2594200 2594200 0 6698 2748 6921 16596 13447 13447 1 26018 0 INLVLSR TWFSIPEKNRPLKGRINLVLSRELKEPPQG KNRPLKGRINLVLSRELKEPPQGAHFLSRS R I N S R E 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 813.50724 P00374;Q86XF0 P00374 72 78 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 2 0.034145 101.6 By MS/MS 8.5 0.5 1 1 2 1216200 1216200 0 6699 442 6922 16597;16598 13448 13448 1 20685 0 INMLVIELK ASYEFVQRLLKGYMKINMLVIELKSEALKD LKGYMKINMLVIELKSEALKDRHWKQLMKR K I N L K S 0 0 1 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 0 1 0 0 9 0 1071.6362 Q14204 Q14204 1396 1404 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0020117 120.31 By MS/MS 1.5 0.5 1 1 2 229010 229010 0 6700 1433 6923 16599;16600 13449 13449 831 1 62739 0 INMVEELEK EGQAYDVDFTPPFRRINMVEELEKALGMKL TPPFRRINMVEELEKALGMKLPETNLFETE R I N E K A 0 0 1 0 0 0 3 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 9 0 1103.5533 Q15046 Q15046 394 402 KARS Lysine--tRNA ligase yes yes 2 0.00071472 140.11 By MS/MS 5 0 1 1 1487200 1487200 0 6701 1481 6924 16601 13450 13450 1 14915 0 INPETVNLSI HSHMIAMIHSLSGGKINPETVNLSI_____ LSGGKINPETVNLSI_______________ K I N S I - 0 0 2 0 0 0 1 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 10 0 1098.5921 Q8TCG1 Q8TCG1 896 905 KIAA1524 Protein CIP2A yes yes 2 0.050182 72.243 By MS/MS 4 0 1 1 496420 496420 0 6702 1990 6925 16602 13451 13451 1 46716 0 INQLPEAER SNNKENITIVDISRKINQLPEAERNLLENG VDISRKINQLPEAERNLLENGSVYVGLNAA K I N E R N 1 1 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 9 0 1068.5564 Q9H061 Q9H061 21 29 TMEM126A Transmembrane protein 126A yes yes 2 0.002123 119.75 By MS/MS 9 0 1 1 1049400 1049400 0 6703 2401 6926 16603 13452 13452 1 20653 0 INQMATAPDSQR GFSRSNPYYIVKQGKINQMATAPDSQRLKL QGKINQMATAPDSQRLKLLREVAGTRVYDE K I N Q R L 2 1 1 1 0 2 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 0 12 0 1330.6299 Q9UQE7 Q9UQE7 144 155 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00020156 149.94 By MS/MS 3 0 1 1 381390 381390 0 6704 2807 6927 16604 13453 13453 1172 1 6978.3 0 INQNLHR TLYLGFHRLHDQMVKINQNLHRLQVAWRDA RLHDQMVKINQNLHRLQVAWRDAQQSSSPA K I N H R L 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 893.48315 Q14139 Q14139 532 538 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.016869 117.56 By MS/MS 3 0 1 1 535740 535740 0 6705 1421 6928 16605 13454 13454 1 9802.5 0 INQQEEPGFEVITR SEMADFLSDAIPGLKINQQEEPGFEVITRI KINQQEEPGFEVITRIDLGERPVVQRREPV K I N T R I 0 1 1 0 0 2 3 1 0 2 0 0 0 1 1 0 1 0 0 1 0 0 14 0 1658.8264 Q8TC07 Q8TC07 289 302 TBC1D15 TBC1 domain family member 15 yes yes 2 1.2863E-16 256.95 By MS/MS 5 0 1 1 4257700 4257700 0 6706 1987 6929 16606 13455 13455 1 42702 0 INQVFHGSCITEGNELTK YSRLPKDDVHAKESKINQVFHGSCITEGNE VFHGSCITEGNELTKTLIKLCYDAFTENMA K I N T K T 0 0 2 0 1 1 2 2 1 2 1 1 0 1 0 1 2 0 0 1 0 0 18 0 2045.984 P78527 P78527 1896 1913 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.00023379 157.37 By MS/MS 1.5 0.5 1 1 2 3346000 3346000 0 6707 1225 6930 16607;16608 13456;13457 13457 2 1001000 0 INSDDSNLYLTASK ELEKSGARRIGDVVRINSDDSNLYLTASKK RINSDDSNLYLTASKKKPTCCP________ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 Q9BZG1 Q9BZG1 239 252 RAB34 Ras-related protein Rab-34 yes yes 2 0.010815 88.163 By MS/MS 8 0 1 1 609110 609110 0 6708 2378 6931 16609 13458 13458 0 7690 0 INSIEIAPCLL FKKKRIVTTPQTVLRINSIEIAPCLL____ TVLRINSIEIAPCLL_______________ R I N L L - 1 0 1 0 1 0 1 0 0 3 2 0 0 0 1 1 0 0 0 0 0 0 11 0 1241.669 Q7Z2W9 Q7Z2W9 195 205 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.0058308 101.72 By MS/MS 9.5 0.5 1 1 2 1165800 1165800 0 6709 1779 6932 16610;16611 13459 13459 1 28753 0 INSTATPDQDR SEAKTRMAMFKKSLRINSTATPDQDRDKIK KSLRINSTATPDQDRDKIKQFAAQEEKRQK R I N D R D 1 1 1 2 0 1 0 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 11 0 1216.5684 Q9H2G2 Q9H2G2 1092 1102 SLK STE20-like serine/threonine-protein kinase yes yes 2 9.254E-05 152.54 By MS/MS 2 0 1 1 200290 200290 0 6710 2429 6933 16612 13460 13460 1 67748 0 INSYGYGDHYIHIK QTDQKIRMGGKGIPRINSYGYGDHYIHIKI RINSYGYGDHYIHIKIRVPKRLTSRQQSLI R I N I K I 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 0 0 3 0 0 0 14 0 1678.8104 Q96EY1 Q96EY1 396 409 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 2.5787E-05 137.16 By MS/MS 7 0 1 1 1078400 1078400 0 6711 2150 6934 16613 13461 13461 0 16929 0 INVPELPTPDEDNKLEVQK TSEIHNTVKIIPDSKINVPELPTPDEDNKL ELPTPDEDNKLEVQKVSNTQYHEVMNLEPE K I N Q K V 0 0 2 2 0 1 3 0 0 1 2 2 0 0 3 0 1 0 0 2 0 0 19 1 2177.1216 O43264 O43264 431 449 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 3 0.043731 58.83 By MS/MS 4.5 0.5 1 1 2 3967400 3967400 0 6712 200 6935 16614;16615 13462 13462 1 346890 0 INVYYNEAAGNK PTGSYHGDSDLQLERINVYYNEAAGNKYVP LERINVYYNEAAGNKYVPRAILVDLEPGTM R I N N K Y 2 0 3 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 2 1 0 0 12 0 1354.6517 Q13885 Q13885 47 58 TUBB2A Tubulin beta-2A chain yes yes 2 3.9983E-06 211.64 By MS/MS 6.5 0.5 1 1 2 8073600 8073600 0 6713 1412 6936 16616;16617 13463 13463 1 59561 0 INVYYNEAAGNKYVPR PTGSYHGDSDLQLERINVYYNEAAGNKYVP NVYYNEAAGNKYVPRAILVDLEPGTMDSVR R I N P R A 2 1 3 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 3 2 0 0 16 1 1869.9373 Q13885 Q13885 47 62 TUBB2A Tubulin beta-2A chain yes yes 2 3.3492E-06 206.46 By MS/MS 6 0 1 1 6103900 6103900 0 6714 1412 6937 16618 13464 13464 1 41960 0 INVYYNEATGGK PTGTYHGDSDLQLERINVYYNEATGGKYVP LERINVYYNEATGGKYVPRAVLVDLEPGTM R I N G K Y 1 0 2 0 0 0 1 2 0 1 0 1 0 0 0 0 1 0 2 1 0 0 12 0 1327.6408 P68371 P68371 47 58 TUBB4B Tubulin beta-4B chain yes yes 2 1.3576E-08 211.37 By MS/MS By MS/MS 6.44 2.17 1 1 1 2 1 1 1 1 8 1 191300000 190900000 404870 6715 1212 6938 16619;16620;16621;16622;16623;16624;16625;16626;16627 13465;13466;13467;13468;13469;13470;13471;13472 13470 8 1705800 414880 INVYYNEATGGKYVPR PTGTYHGDSDLQLERINVYYNEATGGKYVP NVYYNEATGGKYVPRAVLVDLEPGTMDSVR R I N P R A 1 1 2 0 0 0 1 2 0 1 0 1 0 0 1 0 1 0 3 2 0 0 16 1 1842.9264 P68371 P68371 47 62 TUBB4B Tubulin beta-4B chain yes yes 2;3 0.00034367 194.86 By MS/MS By matching 6.6 0.8 3 1 1 4 1 54498000 54408000 89505 6716 1212 6939 16628;16629;16630;16631;16632 13473;13474;13475 13474 3 387880 91717 INVYYNEATGGNYVPR PTGTYHGDSDLQLERINVYYNEATGGNYVP NVYYNEATGGNYVPRAVLVDLEPGTMDSVR R I N P R A 1 1 3 0 0 0 1 2 0 1 0 0 0 0 1 0 1 0 3 2 0 0 16 0 1828.8744 P04350 P04350 47 62 TUBB4A Tubulin beta-4A chain yes yes 2 0.00034212 170.79 By MS/MS 6 0 1 1 7325300 7325300 0 6717 472 6940 16633 13476 13476 1 50355 0 INVYYNEATGNK PTGSYHGDSDLQLERINVYYNEATGNKYVP LERINVYYNEATGNKYVPRAILVDLEPGTM R I N N K Y 1 0 3 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 2 1 0 0 12 0 1384.6623 Q9BVA1 Q9BVA1 47 58 TUBB2B Tubulin beta-2B chain yes yes 2 4.1868E-06 190.26 By MS/MS 6 0 1 1 8879300 8879300 0 6718 2331 6941 16634 13477 13477 1 61038 0 INVYYNEATGNKYVPR PTGSYHGDSDLQLERINVYYNEATGNKYVP NVYYNEATGNKYVPRAILVDLEPGTMDSVR R I N P R A 1 1 3 0 0 0 1 1 0 1 0 1 0 0 1 0 1 0 3 2 0 0 16 1 1899.9479 Q9BVA1 Q9BVA1 47 62 TUBB2B Tubulin beta-2B chain yes yes 2 0.00078111 179.59 By MS/MS 6 0 1 1 5074600 5074600 0 6719 2331 6942 16635 13478 13478 1 34884 0 INVYYNESSSQK PAGGYVGDSALQLERINVYYNESSSQKYVP LERINVYYNESSSQKYVPRAALVDLEPGTM R I N Q K Y 0 0 2 0 0 1 1 0 0 1 0 1 0 0 0 3 0 0 2 1 0 0 12 0 1430.6678 Q9BUF5 Q9BUF5 47 58 TUBB6 Tubulin beta-6 chain yes yes 2 1.1726E-08 213.35 By MS/MS By matching 6.75 0.829 2 1 1 3 1 6735900 6685500 50321 6720 2324 6943 16636;16637;16638;16639 13479 13479 1 51294 51565 IPACIAGER PKHPGSRKNMDCYCRIPACIAGERRYGTCI MDCYCRIPACIAGERRYGTCIYQGRLWAFC R I P E R R 2 1 0 0 1 0 1 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 9 0 985.5015 P59666;P59665 P59666 70 78 DEFA3;DEFA1 Neutrophil defensin 3;HP 3-56;Neutrophil defensin 2;Neutrophil defensin 1;HP 1-56;Neutrophil defensin 2 yes no 2 0.0014938 136.8 By matching By MS/MS 6.4 4.03 1 1 1 2 1 4 4166000 151410 4014600 6721 1087 6944 16640;16641;16642;16643;16644 13480;13481 13480 2 8160.5 4167500 IPAVVVEK VYKYIVQKLYGFPYKIPAVVVEKDAVFIPA LYGFPYKIPAVVVEKDAVFIPAGWDNDKKI K I P E K D 1 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 3 0 0 8 0 853.5273 Q9Y6G9 Q9Y6G9 311 318 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.01951 100.19 By MS/MS 6 0 1 1 1614600 1614600 0 6722 2943 6945 16645 13482 13482 1 11099 0 IPDEFDNDPILVQQLR VYIFGNNPVDENGAKIPDEFDNDPILVQQL PDEFDNDPILVQQLRRTYKYFKDYRQMIIE K I P L R R 0 1 1 3 0 2 1 0 0 2 2 0 0 1 2 0 0 0 0 1 0 0 16 0 1910.9738 Q3ZCQ8 Q3ZCQ8 98 113 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 2.2083E-07 249.28 By MS/MS 8.17 1.07 2 2 1 1 6 8155200 8155200 0 6723 1580 6946 16646;16647;16648;16649;16650;16651 13483;13484;13485;13486;13487;13488;13489;13490;13491;13492;13493;13494 13483 12 131360 0 IPDQLVILDMK YDMFEVCFESKGTGRIPDQLVILDMKHGVE GTGRIPDQLVILDMKHGVEAKNYEEIAKVE R I P M K H 0 0 0 2 0 1 0 0 0 2 2 1 1 0 1 0 0 0 0 1 0 0 11 0 1283.7159 P49755 P49755 117 127 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 0.00075492 125.97 By MS/MS 9 0 2 2 1713500 1713500 0 6724 961 6947;6948 16652;16653 13495;13496 13495 528 2 33721 0 IPDWFLNR VERVITIMQNPRQYKIPDWFLNRQKDVKDG QNPRQYKIPDWFLNRQKDVKDGKYSQVLAN K I P N R Q 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 8 0 1059.5502 P62269 P62269 79 86 RPS18 40S ribosomal protein S18 yes yes 2 0.0027695 133.12 By MS/MS 9.5 0.5 1 1 2 9123000 9123000 0 6725 1149 6949 16654;16655 13497;13498;13499 13497 3 225270 0 IPEDQHALLVK PGRCVPQIIAFLNSKIPEDQHALLVKYQGL LNSKIPEDQHALLVKYQGLVVKQLVSQSKK K I P V K Y 1 0 0 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1261.703 O94874 O94874 720 730 UFL1 E3 UFM1-protein ligase 1 yes yes 2;3 0.00052873 130.98 By MS/MS 4 0 2 2 5299500 5299500 0 6726 372 6950 16656;16657 13500;13501 13501 2 498720 0 IPELAINPLGDR DKGENGTLSREDFQRIPELAINPLGDRIIN FQRIPELAINPLGDRIINAFFPEGEDQVNF R I P D R I 1 1 1 1 0 0 1 1 0 2 2 0 0 0 2 0 0 0 0 0 0 0 12 0 1306.7245 Q99653 Q99653 54 65 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.00040977 136.81 By MS/MS 9 0.816 1 1 1 3 1655300 1655300 0 6727 2257 6951 16658;16659;16660 13502;13503 13502 2 28863 0 IPELDFEIPAFSQK DMNREVVKTDSAATRIPELDFEIPAFSQKG RIPELDFEIPAFSQKGALTTVEGLITRAIS R I P Q K G 1 0 0 1 0 1 2 0 0 2 1 1 0 2 2 1 0 0 0 0 0 0 14 0 1632.8399 O75312 O75312 127 140 ZPR1 Zinc finger protein ZPR1 yes yes 2 0.0075428 96.82 By MS/MS 6 0 1 1 169140 169140 0 6728 309 6952 16661 13504 13504 1 1162.7 0 IPEQTYITLK KDLGSLNGTFVNDVRIPEQTYITLKLEDKL VNDVRIPEQTYITLKLEDKLRFGYDTNLFT R I P L K L 0 0 0 0 0 1 1 0 0 2 1 1 0 0 1 0 2 0 1 0 0 0 10 0 1204.6703 Q5SW79 Q5SW79 73 82 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.033621 80.24 By MS/MS 2 0 1 1 594840 594840 0 6729 1623 6953 16662 13505 13505 1 201200 0 IPGGIIEDSCVLR GRKEIDIKKYARVEKIPGGIIEDSCVLRGV EKIPGGIIEDSCVLRGVMINKDVTHPRMRR K I P L R G 0 1 0 1 1 0 1 2 0 3 1 0 0 0 1 1 0 0 0 1 0 0 13 0 1427.7442 P49368 P49368 204 216 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0012639 121.36 By MS/MS By matching 6 0.756 2 3 2 6 1 85319000 85281000 38764 6730 947 6954 16663;16664;16665;16666;16667;16668;16669 13506;13507;13508;13509;13510 13507 5 733620 39723 IPGIIIAASAVR SIRSLKSDMMSHLVKIPGIIIAASAVRAKA LVKIPGIIIAASAVRAKATRISIQCRSCRN K I P V R A 3 1 0 0 0 0 0 1 0 4 0 0 0 0 1 1 0 0 0 1 0 0 12 0 1179.7339 P33992 P33992 151 162 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0062933 99.788 By MS/MS 4 0 1 1 421390 421390 0 6731 807 6955 16670 13511 13511 1 39656 0 IPGIYGR GKVLDAIIQEKKSGRIPGIYGRLGDLGAID IQEKKSGRIPGIYGRLGDLGAIDEKYDVAI R I P G R L 0 1 0 0 0 0 0 2 0 2 0 0 0 0 1 0 0 0 1 0 0 0 7 0 774.43882 Q9NTJ3 Q9NTJ3 612 618 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.023145 109.88 By MS/MS 3 0 1 1 1654700 1654700 0 6732 2575 6956 16671 13512 13512 1 30276 0 IPIAVSGVR SDVQEMILSSATADRIPIAVSGVRGMGFLM SATADRIPIAVSGVRGMGFLMRHHIETGGG R I P V R G 1 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 0 0 0 2 0 0 9 0 910.56 Q92616 Q92616 2522 2530 GCN1L1 Translational activator GCN1 yes yes 2 0.012679 95.741 By MS/MS 2 0.816 1 1 1 3 1230500 1230500 0 6733 2064 6957 16672;16673;16674 13513 13513 1 358350 0 IPKEQGVLSFWR TADKQYKGIIDCVVRIPKEQGVLSFWRGNL VVRIPKEQGVLSFWRGNLANVIRYFPTQAL R I P W R G 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 1 0 1 0 1 0 0 12 1 1458.7983 P05141;P12236 P05141 61 72 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 0.0019003 138.45 By MS/MS 8 0 2 2 1959100 1959100 0 6734 487;589 6958 16675;16676 13514;13515 13515 2 24734 0 IPLLIGGATTSK EMIFVAKEMERLAIRIPLLIGGATTSKTHT AIRIPLLIGGATTSKTHTAVKIAPRYSAPV R I P S K T 1 0 0 0 0 0 0 2 0 2 2 1 0 0 1 1 2 0 0 0 0 0 12 0 1169.702 Q99707 Q99707 854 865 MTR Methionine synthase yes yes 2 0.0010699 123.86 By MS/MS 3 0 1 1 332140 332140 0 6735 2260 6959 16677 13516;13517 13517 2 6077.3 0 IPLNDLFR EDKGILTVDELLAIRIPLNDLFRCNSLSTL DELLAIRIPLNDLFRCNSLSTLEKNDVVQH R I P F R C 0 1 1 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 8 0 986.55492 P13473 P13473 145 152 LAMP2 Lysosome-associated membrane glycoprotein 2 yes yes 2 0.00774 113.26 By MS/MS 4.5 0.5 1 1 2 1081500 1081500 0 6736 600 6960 16678;16679 13518;13519 13518 2 82502 0 IPPPVIMVQNVSFK VSDKTLSFYFPPCGKIPPPVIMVQNVSFKY KIPPPVIMVQNVSFKYTKDGPCIYNNLEFG K I P F K Y 0 0 1 0 0 1 0 0 0 2 0 1 1 1 3 1 0 0 0 3 0 0 14 0 1567.8796 Q9UG63 Q9UG63 391 404 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.041619 71.153 By MS/MS 5 0 1 1 216590 216590 0 6737 2719 6961 16680 13520 13520 1 2172.3 0 IPQAIAQLSK DWETKNFDFEDVFVKIPQAIAQLSKEAGVE DVFVKIPQAIAQLSKEAGVEKFIHVSHLNA K I P S K E 2 0 0 0 0 2 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 10 0 1067.6339 Q16795 Q16795 148 157 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.006054 99.788 By MS/MS 7 0 1 1 4022700 4022700 0 6738 1559 6962 16681 13521 13521 1 63150 0 IPQLAPPASDSTVTK PQAPVPTTVPVVDVRIPQLAPPASDSTVTK IPQLAPPASDSTVTKLDFDLEPEPPPAPPR R I P T K L 2 0 0 1 0 1 0 0 0 1 1 1 0 0 3 2 2 0 0 1 0 0 15 0 1523.8195 Q16513 Q16513 551 565 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0031829 96.23 By MS/MS 3 0 1 1 394370 394370 0 6739 1547 6963 16682 13522 13522 1 7215.8 0 IPQLLLER VVVISGDTGCGKTTRIPQLLLERYVTEGRG GCGKTTRIPQLLLERYVTEGRGARCNVIIT R I P E R Y 0 1 0 0 0 1 1 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 8 0 980.60187 Q7L2E3 Q7L2E3 467 474 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0053054 124.08 By MS/MS 3 1.41 1 1 1 1 1 5 8097800 8097800 0 6740 1761 6964 16683;16684;16685;16686;16687 13523;13524;13525 13525 3 346760 0 IPQSTLSEFYPR GWQLLRIFPKEMLKRIPQSTLSEFYPRDSA LKRIPQSTLSEFYPRDSAKH__________ R I P P R D 0 1 0 0 0 1 1 0 0 1 1 0 0 1 2 2 1 0 1 0 0 0 12 0 1436.73 P21281 P21281 495 506 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 0.0013363 118.9 By MS/MS 6 0 1 1 1084400 1084400 0 6741 675 6965 16688 13526;13527 13526 2 7454.5 0 IPSAVGYQPTLATDMGTMQER RFTQAGSEVSALLGRIPSAVGYQPTLATDM YQPTLATDMGTMQERITTTKKGSITSVQAI R I P E R I 2 1 0 1 0 2 1 2 0 1 1 0 2 0 2 1 3 0 1 1 0 0 21 0 2265.077 P06576 P06576 325 345 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.1044E-18 254.89 By MS/MS 6.9 0.831 4 3 3 10 24114000 24114000 0 6742 497 6966;6967;6968 16689;16690;16691;16692;16693;16694;16695;16696;16697;16698 13528;13529;13530;13531 13530 200;201 4 193300 0 IPSEQEQLR QPLIQDRCFLSWLVKIPSEQEQLRARQITA LSWLVKIPSEQEQLRARQITAQQINKLEEL K I P L R A 0 1 0 0 0 2 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1098.5669 Q92900 Q92900 245 253 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0048559 109.48 By MS/MS 3.5 0.5 1 1 2 1425500 1425500 0 6743 2077 6969 16699;16700 13532 13532 1 50822 0 IPSISDLK ANSDEQLGEMFLEEKIPSISDLKLAIRRAT EMFLEEKIPSISDLKLAIRRATLKRSFTPV K I P L K L 0 0 0 1 0 0 0 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 8 0 871.50148 Q96RP9 Q96RP9 273 280 GFM1 Elongation factor G, mitochondrial yes yes 2 0.03615 87.754 By MS/MS 4.5 0.5 1 1 2 3054900 3054900 0 6744 2223 6970 16701;16702 13533 13533 1 41874 0 IPTEAPQLELK LEKCQRENGFIYFQKIPTEAPQLELKANYG YFQKIPTEAPQLELKANYGLVEPIPFEFPP K I P L K A 1 0 0 0 0 1 2 0 0 1 2 1 0 0 2 0 1 0 0 0 0 0 11 0 1237.6918 Q5VW32 Q5VW32 335 345 BROX BRO1 domain-containing protein BROX yes yes 2 0.0002647 137.46 By MS/MS 7 0 1 1 2043800 2043800 0 6745 1653 6971 16703 13534 13534 1 32084 0 IPVDTYNNILTVLK ATSSAVSKELTRLLKIPVDTYNNILTVLKL KIPVDTYNNILTVLKLKHFHPLFEYFDYES K I P L K L 0 0 2 1 0 0 0 0 0 2 2 1 0 0 1 0 2 0 1 2 0 0 14 0 1601.9029 Q96QK1 Q96QK1 404 417 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00031612 167.84 By MS/MS 5.5 0.5 1 1 2 389840 389840 0 6746 2217 6972 16704;16705 13535;13536;13537;13538 13536 4 3081.8 0 IPVENILGEVGDGFK IRGSNTCEVHFENTKIPVENILGEVGDGFK IPVENILGEVGDGFKVAMNILNSGRFSMGS K I P F K V 0 0 1 1 0 0 2 3 0 2 1 1 0 1 1 0 0 0 0 2 0 0 15 0 1585.8352 Q9H845 Q9H845 280 294 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 0.00059559 131.08 By MS/MS 6 0 1 1 840560 840560 0 6747 2471 6973 16706 13539 13539 1 5778.2 0 IPVGPETLGR LVRGQKVLDSGAPIKIPVGPETLGRIMNVI GAPIKIPVGPETLGRIMNVIGEPIDERGPI K I P G R I 0 1 0 0 0 0 1 2 0 1 1 0 0 0 2 0 1 0 0 1 0 0 10 0 1037.5869 P06576 P06576 134 143 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.0021026 112.11 By MS/MS 7 0.816 1 1 1 3 3936300 3936300 0 6748 497 6974 16707;16708;16709 13540 13540 1 35844 0 IPVPQQVAR VVQMAVLINNKACGKIPVPQQVARDQDKVH NKACGKIPVPQQVARDQDKVHEFVLQSELG K I P A R D 1 1 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 9 0 1006.5924 Q15031 Q15031 853 861 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0015156 111.65 By MS/MS 4.5 0.5 1 1 2 3581600 3581600 0 6749 1477 6975 16710;16711 13541 13541 1 311410 0 IPWTAASSQLK ALRRSINQPVAFVRRIPWTAASSQLKEHFA FVRRIPWTAASSQLKEHFAQFGHVRRCILP R I P L K E 2 0 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 1 0 0 0 0 11 0 1200.6503 Q9GZT3 Q9GZT3 26 36 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 1.7636E-05 166.07 By MS/MS 10 0 1 1 1706700 1706700 0 6750 2398 6976 16712 13542 13542 1 91983 0 IQALAEETAQNLKR QQSDGDRDLQEHRQRIQALAEETAQNLKRN RIQALAEETAQNLKRNVYQNYRQFIETARE R I Q K R N 3 1 1 0 0 2 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 14 1 1583.8631 Q8IYI6 Q8IYI6 48 61 EXOC8 Exocyst complex component 8 yes yes 2;3 3.4854E-05 134.3 By MS/MS 5 0 2 2 2612600 2612600 0 6751 1887 6977 16713;16714 13543;13544 13544 1 26203 0 IQALGLGEDWNVEK GFRRFKRSAQFFNYKIQALGLGEDWNVEKG KIQALGLGEDWNVEKGTSAGGGQKVRLLKK K I Q E K G 1 0 1 1 0 1 2 2 0 1 2 1 0 0 0 0 0 1 0 1 0 0 14 0 1570.7991 Q02809 Q02809 55 68 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.00083277 128.21 By MS/MS 5 0 1 1 1102700 1102700 0 6752 1280 6978 16715 13545 13545 1 11060 0 IQAVLALSR KAMLIRLKDKIPNVRIQAVLALSRLQDPKD KIPNVRIQAVLALSRLQDPKDDECPVVNAY R I Q S R L 2 1 0 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 969.59712 Q9BPX3 Q9BPX3 160 168 NCAPG Condensin complex subunit 3 yes yes 2 2.3952E-05 152.11 By MS/MS 3 0 1 1 0 0 0 6753 2279 6979 16716 13546 13546 1 0 0 IQCFCFEEQR TYNIVPFEAGQYFNKIQCFCFEEQRLNPQE QYFNKIQCFCFEEQRLNPQEEVDMPVFFYI K I Q Q R L 0 1 0 0 2 2 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 10 0 1415.5962 Q9Y6N1 Q9Y6N1 215 224 COX11 Cytochrome c oxidase assembly protein COX11, mitochondrial yes yes 2 6.7027E-11 210.6 By MS/MS 9 0 1 1 1487400 1487400 0 6754 2949 6980 16717 13547 13547 1 29272 0 IQDAGPASR YKSTSSGHREISSPRIQDAGPASRDVQATG EISSPRIQDAGPASRDVQATGRIADDADPR R I Q S R D 2 1 0 1 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 9 0 913.46174 Q7Z2W4 Q7Z2W4 462 470 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.00078091 138.08 By MS/MS 4.5 0.5 1 1 2 4594200 4594200 0 6755 1778 6981 16718;16719 13548;13549 13548 2 347650 0 IQDGLGELKK DKNEDLGRMYNLVSRIQDGLGELKKLLETH NLVSRIQDGLGELKKLLETHIHNQGLAAIE R I Q K K L 0 0 0 1 0 1 1 2 0 1 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1099.6237 Q13616 Q13616 329 338 CUL1 Cullin-1 yes yes 3 0.039154 90.149 By MS/MS 3.5 1.12 1 1 1 1 4 1784000 1784000 0 6756 1402 6982 16720;16721;16722;16723 13550 13550 1 218530 0 IQDKEGIPPDQQR LEVEPSDTIENVKAKIQDKEGIPPDQQRLI AKIQDKEGIPPDQQRLIFAGKQLEDGRTLS K I Q Q R L 0 1 0 2 0 3 1 1 0 2 0 1 0 0 2 0 0 0 0 0 0 0 13 1 1522.774 P62979;P0CG47;P0CG48;P62987 P62979 30 42 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 2 0.0003351 176.99 By MS/MS By matching 4.19 2.88 3 3 3 1 1 1 1 1 1 1 15 1 14755000 14704000 51024 6757 1190;1191 6983 16724;16725;16726;16727;16728;16729;16730;16731;16732;16733;16734;16735;16736;16737;16738;16739 13551;13552;13553;13554;13555;13556;13557;13558;13559;13560;13561;13562;13563;13564;13565;13566;13567;13568;13569;13570 13570 20 1620400 51024 IQDLEQLAK LNTKVKEKFQQLRHRIQDLEQLAKEQDKES QQLRHRIQDLEQLAKEQDKESEKQLLLQEV R I Q A K E 1 0 0 1 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1056.5815 Q12981 Q12981 58 66 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.00059171 143.37 By MS/MS 8 0 1 1 2632100 2632100 0 6758 1343 6984 16740 13571 13571 1 33230 0 IQDLIPVLLR TQGPYDFGSGETARRIQDLIPVLLRHRLCP ETARRIQDLIPVLLRHRLCPPPEETYALHR R I Q L R H 0 1 0 1 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1178.7387 Q96D53 Q96D53 466 475 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.0044249 106.88 By MS/MS 6 0 1 1 787860 787860 0 6759 2132 6985 16741 13572 13572 1 5415.9 0 IQDLLAEGTITGVIDDR LASQVGLRTQDTINRIQDLLAEGTITGVID DLLAEGTITGVIDDRGKFIYITPEELAAVA R I Q D R G 1 1 0 3 0 1 1 2 0 3 2 0 0 0 0 0 2 0 0 1 0 0 17 0 1827.9578 Q96HY6 Q96HY6 249 265 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 0.00040035 147.83 By MS/MS 7 0 1 1 83453 83453 0 6760 2169 6986 16742 13573 13573 1 1310.1 0 IQDWYDKK KVQALEEANNDLENKIQDWYDKKGPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT K I Q K K G 0 0 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 8 1 1094.5397 P35527;CON__P35527 P35527 185 192 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.021413 104.2 By matching By MS/MS 3 0 2 1 1 592740 96703 496030 + 6761 822 6987 16743;16744 13574 13574 1 1769.4 63138 IQDWYDKKGPAAIQK KVQALEEANNDLENKIQDWYDKKGPAAIQK IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ K I Q Q K N 2 0 0 2 0 2 0 1 0 2 0 3 0 0 1 0 0 1 1 0 0 0 15 2 1759.9257 P35527;CON__P35527 P35527 185 199 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.0016357 128.95 By MS/MS By MS/MS 4 1.41 1 1 1 1 1 4 1 5357600 4582200 775420 + 6762 822 6988 16745;16746;16747;16748;16749 13575;13576 13575 2 226420 98700 IQEAGTEVVK KVDFPQDQLTALTGRIQEAGTEVVKAKAGA ALTGRIQEAGTEVVKAKAGAGSATLSMAYA R I Q V K A 1 0 0 0 0 1 2 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 10 0 1072.5764 P40926 P40926 230 239 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0065657 102.06 By MS/MS By matching 7.8 0.748 2 2 1 3 2 8582800 8503600 79236 6763 862 6989 16750;16751;16752;16753;16754 13577;13578 13578 2 114240 120130 IQEAGTEVVKAK KVDFPQDQLTALTGRIQEAGTEVVKAKAGA TGRIQEAGTEVVKAKAGAGSATLSMAYAGA R I Q A K A 2 0 0 0 0 1 2 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 12 1 1271.7085 P40926 P40926 230 241 MDH2 Malate dehydrogenase, mitochondrial yes yes 3 0.0035088 119.74 By MS/MS 7.5 0.5 1 1 2 1577200 1577200 0 6764 862 6990 16755;16756 13579 13579 1 20883 0 IQEDYNDKYWDQR YSEFMVEEHELRKERIQEDYNDKYWDQRYT ERIQEDYNDKYWDQRYTIVQQQIPSFLQKM R I Q Q R Y 0 1 1 3 0 2 1 0 0 1 0 1 0 0 0 0 0 1 2 0 0 0 13 1 1771.7802 Q9BSJ2 Q9BSJ2 419 431 TUBGCP2 Gamma-tubulin complex component 2 yes yes 3 0.020088 78.287 By MS/MS 4.5 0.5 1 1 2 1492600 1492600 0 6765 2307 6991 16757;16758 13580 13580 1 113290 0 IQEEECPPRDDFSDADQLR KAAAMAAAAAETSQRIQEEECPPRDDFSDA ECPPRDDFSDADQLRVGNDGIFMLAFFMAF R I Q L R V 1 2 0 4 1 2 3 0 0 1 1 0 0 1 2 1 0 0 0 0 0 0 19 1 2319.0074 Q9NV92 Q9NV92 208 226 NDFIP2 NEDD4 family-interacting protein 2 yes yes 3 0.0092174 79.514 By MS/MS By matching 7 0 2 1 1 1801400 1743100 58284 6766 2590 6992 16759;16760 13581 13581 1 27364 104970 IQEENVIPR KINGDWQRADAVWNKIQEENVIPREKTLRL DAVWNKIQEENVIPREKTLRLLAEILREGN K I Q P R E 0 1 1 0 0 1 2 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 9 0 1096.5877 P42704 P42704 981 989 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 7.0558E-07 186.41 By MS/MS By MS/MS 3.5 1.5 1 1 2 2 1 1 6 2 47268000 46426000 842380 6767 886 6993 16761;16762;16763;16764;16765;16766;16767;16768 13582;13583;13584;13585;13586;13587;13588 13587 7 1533100 286610 IQEENVIPREK KINGDWQRADAVWNKIQEENVIPREKTLRL VWNKIQEENVIPREKTLRLLAEILREGNQE K I Q E K T 0 1 1 0 0 1 3 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 11 1 1353.7252 P42704 P42704 981 991 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.036526 97.597 By MS/MS 3 0 1 1 403140 403140 0 6768 886 6994 16769 13589 13589 1 7376.3 0 IQEGVFDINNEANGIK VEEAFINTAKEIYEKIQEGVFDINNEANGI QEGVFDINNEANGIKIGPQHAATNATHAGN K I Q I K I 1 0 3 1 0 1 2 2 0 3 0 1 0 1 0 0 0 0 0 1 0 0 16 0 1759.8741 P61019 P61019 171 186 RAB2A Ras-related protein Rab-2A yes yes 2 1.9467E-24 288.29 By MS/MS 9 0 1 1 429040 429040 0 6769 1105 6995 16770 13590 13590 1 8443.5 0 IQEIIEQLDVTTSEYEKEK MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY IEQLDVTTSEYEKEKLNERLAKLSDGVAVL R I Q E K L 0 0 0 1 0 2 5 0 0 3 1 2 0 0 0 1 2 0 1 1 0 0 19 1 2294.1529 P10809 P10809 371 389 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.00076587 106.94 By MS/MS By matching 6 0 2 1 1 15968000 15873000 95204 6770 569 6996 16771;16772 13591 13591 1 109120 97557 IQEIIEQLDVTTSEYEKEKLNER MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY DVTTSEYEKEKLNERLAKLSDGVAVLKVGG R I Q E R L 0 1 1 1 0 2 6 0 0 3 2 2 0 0 0 1 2 0 1 1 0 0 23 2 2806.4236 P10809 P10809 371 393 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 4 0.001829 80.362 By MS/MS 6 0 1 1 6746700 6746700 0 6771 569 6997 16773 13592 13592 1 46378 0 IQELAHELAAAK TLASVQELLIQQQQKIQELAHELAAAKATT QQKIQELAHELAAAKATTSTNWILESQNIN K I Q A K A 4 0 0 0 0 1 2 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 12 0 1292.7089 O75381 O75381 184 195 PEX14 Peroxisomal membrane protein PEX14 yes yes 2;3 0.0001767 129.74 By MS/MS 6.5 0.5 2 2 4 6796700 6796700 0 6772 319 6998 16774;16775;16776;16777 13593;13594 13593 2 55165 0 IQELEDLLAK QLSNLQKESRACLERIQELEDLLAKEKDNS ACLERIQELEDLLAKEKDNSRRMLTDKERE R I Q A K E 1 0 0 1 0 1 2 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1170.6496 P20700 P20700 321 330 LMNB1 Lamin-B1 yes yes 2 0.00031327 139.43 By MS/MS 5 0 1 1 637740 637740 0 6773 674 6999 16778 13595 13595 1 6396.2 0 IQEQVQQTLAR AGSSGRGGQTVKSLRIQEQVQQTLARKGRS KSLRIQEQVQQTLARKGRSSVGNGNLHRTS R I Q A R K 1 1 0 0 0 4 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1312.7099 Q99959 Q99959 56 66 PKP2 Plakophilin-2 yes yes 2 2.3162E-05 160.91 By MS/MS 4 0 1 1 950820 950820 0 6774 2274 7000 16779 13596 13596 1 89478 0 IQESHPELR SSMSVTSLEAELQAKIQESHPELRRVYFNK AELQAKIQESHPELRRVYFNKGL_______ K I Q L R R 0 1 0 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1107.5673 Q9H9B4 Q9H9B4 306 314 SFXN1 Sideroflexin-1 yes yes 2 0.0022045 118.71 By MS/MS 7.5 0.5 1 1 2 4695200 4695200 0 6775 2485 7001 16780;16781 13597 13597 1 59923 0 IQESHPELRR SSMSVTSLEAELQAKIQESHPELRRVYFNK ELQAKIQESHPELRRVYFNKGL________ K I Q R R V 0 2 0 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 10 1 1263.6684 Q9H9B4 Q9H9B4 306 315 SFXN1 Sideroflexin-1 yes yes 2 0.0045896 117.01 By MS/MS 8 0 1 1 2584600 2584600 0 6776 2485 7002 16782 13598 13598 1 32630 0 IQESYGDVYGICTK LRALMELRSTDALRKIQESYGDVYGICTKL KIQESYGDVYGICTKLKTSPNEGLSGNPAD K I Q T K L 0 0 0 1 1 1 1 2 0 2 0 1 0 0 0 1 1 0 2 1 0 0 14 0 1631.7501 P20020 P20020 49 62 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 0.00093801 126.32 By MS/MS 2 0.816 1 1 1 3 464890 464890 0 6777 667 7003 16783;16784;16785 13599 13599 1 105290 0 IQETQAELPR LDTNKSRFVDFQKVRIQETQAELPRGSIPR FQKVRIQETQAELPRGSIPRSLEVILRAEA R I Q P R G 1 1 0 0 0 2 2 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1183.6197 Q14566 Q14566 208 217 MCM6 DNA replication licensing factor MCM6 yes yes 2 4.4457E-15 242.12 By MS/MS 4.5 0.5 1 1 2 4079700 4079700 0 6778 1444 7004 16786;16787 13600 13600 1 340350 0 IQEVADELQK TQGLIFVVDSNDRERIQEVADELQKMLLVD NDRERIQEVADELQKMLLVDELRDAVLLLF R I Q Q K M 1 0 0 1 0 2 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1171.6085 P18085 P18085 100 109 ARF4 ADP-ribosylation factor 4 yes yes 2 7.7436E-15 237.51 By MS/MS By matching 9.33 0.471 2 1 2 1 20341000 20313000 28082 6779 651 7005 16788;16789;16790 13601;13602;13603 13601 3 520940 64035 IQEVGEPSKEEK ______________________________ KKRIQEVGEPSKEEKAVAKYLRFNCPTKST R I Q E K A 0 0 0 0 0 1 4 1 0 1 0 2 0 0 1 1 0 0 0 1 0 0 12 1 1371.6882 Q99442 Q99442 11 22 SEC62 Translocation protein SEC62 yes yes 2 0.00018744 151.83 By MS/MS 6 0 1 1 719920 719920 0 6780 2244 7006 16791 13604 13604 0 4948.9 0 IQEYLQSSGLAQR LQSSMAQLPMEELNRIQEYLQSSGLAQRHQ NRIQEYLQSSGLAQRHQRLYSLLDRFRLST R I Q Q R H 1 1 0 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1491.7682 P42858 P42858 2039 2051 HTT Huntingtin yes yes 2 0.00064812 132.47 By MS/MS 1.5 0.5 1 1 2 357040 357040 0 6781 890 7007 16792;16793 13605 13605 1 108320 0 IQFDEGYDNYPGQEK ARSATARVRSRPELRIQFDEGYDNYPGQEK IQFDEGYDNYPGQEKTDDLKKRKNIFTGKR R I Q E K T 0 0 1 2 0 2 2 2 0 1 0 1 0 1 1 0 0 0 2 0 0 0 15 0 1801.7795 Q92665 Q92665 226 240 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 6.2039E-24 282.12 By MS/MS By matching 7.33 0.471 2 1 2 1 5194500 5139500 55029 6782 2067 7008 16794;16795;16796 13606 13606 1 79679 99106 IQFDEGYDNYPGQEKTDDLKK ARSATARVRSRPELRIQFDEGYDNYPGQEK YDNYPGQEKTDDLKKRKNIFTGKRLNIFDM R I Q K K R 0 0 1 4 0 2 2 2 0 1 1 3 0 1 1 0 1 0 2 0 0 0 21 2 2502.1551 Q92665 Q92665 226 246 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 4 0.0053386 72.772 By MS/MS 7 0 1 1 2172200 2172200 0 6783 2067 7009 16797 13607 13607 1 34100 0 IQFVGACNPPTDPGR GFYRTSDQTWVKLERIQFVGACNPPTDPGR IQFVGACNPPTDPGRKPLSHRFLRHVPVVY R I Q G R K 1 1 1 1 1 1 0 2 0 1 0 0 0 1 3 0 1 0 0 1 0 0 15 0 1627.7777 Q14204 Q14204 2706 2720 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00035267 172.33 By MS/MS By matching 1.75 0.829 2 1 1 3 1 5107000 5070100 36924 6784 1433 7010 16798;16799;16800;16801 13608;13609;13610 13609 3 1365700 36924 IQGLTVEQAEAVVR LRGNEIVLSAGSTPRIQGLTVEQAEAVVRL RIQGLTVEQAEAVVRLSCLPAFKDLIAKVQ R I Q V R L 2 1 0 0 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 3 0 0 14 0 1511.8308 Q14204 Q14204 3924 3937 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.65E-17 269.04 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 9504300 9450800 53532 6785 1433 7011 16802;16803;16804;16805;16806;16807 13611;13612;13613;13614 13612 4 1543000 53532 IQGPQPVPGEIK IASVINIPFDVAKSRIQGPQPVPGEIKYRT KSRIQGPQPVPGEIKYRTCFKTMATVYQEE R I Q I K Y 0 0 0 0 0 2 1 2 0 2 0 1 0 0 3 0 0 0 0 1 0 0 12 0 1261.703 Q9BQT8 Q9BQT8 235 246 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 0.0018259 112.83 By MS/MS 8 0 1 1 1235200 1235200 0 6786 2293 7012 16808 13615 13615 1 15594 0 IQIEAIPLALQGR LCEACDQLGWTKPTKIQIEAIPLALQGRDI TKIQIEAIPLALQGRDIIGLAETGSGKTGA K I Q G R D 2 1 0 0 0 2 1 1 0 3 2 0 0 0 1 0 0 0 0 0 0 0 13 0 1420.8402 Q9H0S4 Q9H0S4 50 62 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 2 0.00020781 161.99 By MS/MS 6 0 1 1 1650600 1650600 0 6787 2414 7013 16809 13616 13616 1 11347 0 IQIGTQAIER EISNNNSTMVMTGMRIQIGTQAIERAPSYI MTGMRIQIGTQAIERAPSYIEIFGRTMQLN R I Q E R A 1 1 0 0 0 2 1 1 0 3 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1127.6299 Q5T4S7 Q5T4S7 2354 2363 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.0094885 95.483 By MS/MS 1.5 0.5 1 1 2 357890 357890 0 6788 1633 7014 16810;16811 13617 13617 1 100700 0 IQIPRPDDPSNQIK NGEKLQDLELKTATKIQIPRPDDPSNQIKI KIQIPRPDDPSNQIKITGTKEGIEKARHEV K I Q I K I 0 1 1 2 0 2 0 0 0 3 0 1 0 0 3 1 0 0 0 0 0 0 14 1 1619.8631 Q00341 Q00341 184 197 HDLBP Vigilin yes yes 3 0.030587 67.952 By MS/MS 3.5 0.5 1 1 2 1282800 1282800 0 6789 1260 7015 16812;16813 13618 13618 1 65235 0 IQKDINELNLPK GTKGSSKKASAAQLRIQKDINELNLPKTCD QLRIQKDINELNLPKTCDISFSDPDDLLNF R I Q P K T 0 0 2 1 0 1 1 0 0 2 2 2 0 0 1 0 0 0 0 0 0 0 12 1 1423.8035 P61081 P61081 34 45 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2;3 0.00076022 152.69 By MS/MS 9.33 0.471 2 1 3 3095100 3095100 0 6790 1108 7016 16814;16815;16816 13619;13620 13620 2 71543 0 IQKENPK LPKKKQQKDSLINLKIQKENPKVVNEINIE KDSLINLKIQKENPKVVNEINIEDLCLTKA K I Q P K V 0 0 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 7 1 855.48142 Q8N5K1 Q8N5K1 75 81 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 0.051997 134.06 By MS/MS 10 0 1 1 1205200 1205200 0 6791 1923 7017 16817 13621 13621 1 64955 0 IQLEPLPPLTPK REGHLKKDCPEDFKRIQLEPLPPLTPKFLN FKRIQLEPLPPLTPKFLNILDQVCIQCYKD R I Q P K F 0 0 0 0 0 1 1 0 0 1 3 1 0 0 4 0 1 0 0 0 0 0 12 0 1344.8017 Q5VYS8 Q5VYS8 985 996 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 0.051463 68.536 By MS/MS 2 0 1 1 142120 142120 0 6792 1657 7018 16818 13622 13622 1 48070 0 IQLFLAR LRRLSKSQNTVFCGRIQLFLARLFPLSEKS QNTVFCGRIQLFLARLFPLSEKSGLNLQSQ R I Q A R L 1 1 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 7 0 859.52797 Q96FV9 Q96FV9 159 165 THOC1 THO complex subunit 1 yes yes 2 0.010945 132.96 By MS/MS 5 0 1 1 564730 564730 0 6793 2154 7019 16819 13623 13623 1 5664 0 IQLLDLPGIIEGAK TLTTVPGVIRYKGAKIQLLDLPGIIEGAKD KIQLLDLPGIIEGAKDGKGRGRQVIAVART K I Q A K D 1 0 0 1 0 1 1 2 0 3 3 1 0 0 1 0 0 0 0 0 0 0 14 0 1478.8708 Q9Y295 Q9Y295 113 126 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 0.0036275 107.85 By MS/MS 7 0 1 1 43863 43863 0 6794 2822 7020 16820 13624;13625 13625 2 688.58 0 IQLLVFK AKLAGFLDLTEQEFRIQLLVFKHKMKNLVW DLTEQEFRIQLLVFKHKMKNLVWTSGISAL R I Q F K H 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 0 0 1 0 0 7 0 859.55312 Q9Y262 Q9Y262 488 494 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.01405 124.89 By MS/MS 5.18 2.92 1 2 1 1 1 1 1 1 1 1 11 23655000 23655000 0 6795 2814 7021 16821;16822;16823;16824;16825;16826;16827;16828;16829;16830;16831 13626;13627;13628;13629;13630 13628 5 400950 0 IQLVEEELDRAQER KAADAEAEVASLNRRIQLVEEELDRAQERL RIQLVEEELDRAQERLATALQKLEEAEKAA R I Q E R L 1 2 0 1 0 2 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 14 1 1726.885 P06753;P67936;CON__Q3SX28;P09493;P07951 P06753 93 106 TPM3;TPM4;TPM1;TPM2 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain yes no 2 0.0023022 124.38 By MS/MS 8 0 1 1 1529500 1529500 0 6796 504 7022 16832 13631 13631 1 19310 0 IQNFLNEFK EMKVSSTWLRDFQMKIQNFLNEFKNIPEIV RDFQMKIQNFLNEFKNIPEIVAVYSRIEQL K I Q F K N 0 0 2 0 0 1 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1151.5975 Q8TB03 Q8TB03 185 193 CXorf38 Uncharacterized protein CXorf38 yes yes 2 0.00060852 143.37 By MS/MS 7.5 0.5 1 1 2 320050 320050 0 6797 1978 7023 16833;16834 13632 13632 1 4739.5 0 IQNGAQGIR SCSADEVQRFFSDCKIQNGAQGIRFIYTRE FFSDCKIQNGAQGIRFIYTREGRPSGEAFV K I Q I R F 1 1 1 0 0 2 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 955.51993 P31943 P31943 36 44 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 2 0.031966 83.753 By MS/MS 6 0 1 1 1312200 1312200 0 6798 791 7024 16835 13633 13633 1 9020 0 IQNMVSSGR LIEEDDVILLAAALRIQNMVSSGRRWLREQ LAAALRIQNMVSSGRRWLREQQHRRWRLHC R I Q G R R 0 1 1 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 0 1 0 0 9 0 990.49166 Q6UB35 Q6UB35 327 335 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.049645 76.1 By MS/MS 4 0 1 1 372820 372820 0 6799 1728 7025 16836 13634 13634 1 35085 0 IQQDADSVITVGR PSMWTRPQIKDFKEKIQQDADSVITVGRGE EKIQQDADSVITVGRGEVVTVRVPTHEEGS K I Q G R G 1 1 0 2 0 2 0 1 0 2 0 0 0 0 0 1 1 0 0 2 0 0 13 0 1400.726 Q9H3P7 Q9H3P7 387 399 ACBD3 Golgi resident protein GCP60 yes yes 2 0.00034829 147.33 By MS/MS 5 0 1 1 2539700 2539700 0 6800 2440 7026 16837 13635;13636 13635 2 25472 0 IQQGALELLR YTYESKMAFLTRVAKIQQGALELLRSGVIV TRVAKIQQGALELLRSGVIVRLAQCQVYDM K I Q L R S 1 1 0 0 0 2 1 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1139.6663 Q92621 Q92621 1566 1575 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00031327 139.43 By MS/MS 3 0.816 1 1 1 3 1860100 1860100 0 6801 2065 7027 16838;16839;16840 13637;13638 13637 2 455820 0 IQQIETTLNILDAK FSTVCEEKLADLSLRIQQIETTLNILDAKL RIQQIETTLNILDAKLSSIPGLDDVTVEVS R I Q A K L 1 0 1 1 0 2 1 0 0 3 2 1 0 0 0 0 2 0 0 0 0 0 14 0 1598.8879 Q9Y3C0 Q9Y3C0 59 72 CCDC53 WASH complex subunit CCDC53 yes yes 2 0.00034232 166.45 By MS/MS 8 0 1 1 116000 116000 0 6802 2867 7028 16841 13639 13639 1 1464.5 0 IQQIIEGK TKVDLAEKNVASPSRIQQIIEGKLFPMKAL NVASPSRIQQIIEGKLFPMKALGYFAVVTG R I Q G K L 0 0 0 0 0 2 1 1 0 3 0 1 0 0 0 0 0 0 0 0 0 0 8 0 927.53893 O60313 O60313 482 489 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0036066 133.86 By MS/MS 4 0 1 1 0 0 0 6803 254 7029 16842 13640 13640 1 0 0 IQQNTFTR PATEKDLAEDAPWKKIQQNTFTRWCNEHLK EDAPWKKIQQNTFTRWCNEHLKCVSKRIAN K I Q T R W 0 1 1 0 0 2 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 8 0 1006.5196 P21333;O75369 P21333 44 51 FLNA;FLNB Filamin-A;Filamin-B no no 2 0.018551 101.25 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 3608200 3608200 0 6804 677;315 7030 16843;16844;16845;16846;16847;16848 13641;13642;13643 13642 3 663730 0 IQQQFSDLKR REKEEIEKYRMERPKIQQQFSDLKRKLAEV MERPKIQQQFSDLKRKLAEVTEEEWLSIPE K I Q K R K 0 1 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1261.6779 O94906 O94906 138 147 PRPF6 Pre-mRNA-processing factor 6 yes yes 3 0.036935 70.412 By MS/MS 4 0 1 1 1337500 1337500 0 6805 376 7031 16849 13644 13644 1 125860 0 IQQQQPPPGEK AKKREKLEKFQQKQKIQQQQPPPGEKKPKP QKQKIQQQQPPPGEKKPKPEKREKRDPGVI K I Q E K K 0 0 0 0 0 4 1 1 0 1 0 1 0 0 3 0 0 0 0 0 0 0 11 0 1248.6463 P26640 P26640 253 263 VARS Valine--tRNA ligase yes yes 2 0.00093104 122.96 By MS/MS 3 0 1 1 272290 272290 0 6806 735 7032 16850 13645 13645 1 4982.1 0 IQQVANIAQK EVRQLSALGFVIPAKIQQVANIAQKFCKQA VIPAKIQQVANIAQKFCKQAIILKQVAHFY K I Q Q K F 2 0 1 0 0 3 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 10 0 1111.635 Q8NCM8 Q8NCM8 600 609 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00074195 128.61 By MS/MS 1 0 1 1 78616 78616 0 6807 1952 7033 16851 13646;13647 13646 2 18944 0 IQREQALLNAR EVSEGLMCFDPKELRIQREQALLNARSVPI KELRIQREQALLNARSVPILSRQRDADVEK R I Q A R S 2 2 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 1 1310.7419 Q8N3C0 Q8N3C0 374 384 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 3 0.027199 73.632 By MS/MS 1 0 1 1 231740 231740 0 6808 1911 7034 16852 13648 13648 1 55841 0 IQSIAPSLQVITSK LAVPGTYDPNQPIIRIQSIAPSLQVITSKQ RIQSIAPSLQVITSKQRPRKLTLMGSNGHE R I Q S K Q 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 3 1 0 0 1 0 0 14 0 1483.861 P42345 P42345 2153 2166 MTOR Serine/threonine-protein kinase mTOR yes yes 2 3.1055E-07 171.62 By MS/MS 2 0 1 1 0 0 0 6809 879 7035 16853 13649 13649 1 0 0 IQSPTEETEIFYHR FPQIGQIQYCSLEEKIQSPTEETEIFYHRG KIQSPTEETEIFYHRGV_____________ K I Q H R G 0 1 0 0 0 1 3 0 1 2 0 0 0 1 1 1 2 0 1 0 0 0 14 0 1748.837 Q6P4A7 Q6P4A7 322 335 SFXN4 Sideroflexin-4 yes yes 2;3 4.1042E-05 191.33 By MS/MS By matching 7.4 0.49 3 2 4 1 15796000 15779000 16854 6810 1710 7036 16854;16855;16856;16857;16858 13650;13651;13652 13651 3 235250 30354 IQSQFTDAQK NSQGSEMFGDDDKRKIQSQFTDAQKHYQTL DDKRKIQSQFTDAQKHYQTLVIQLPGYPQH K I Q Q K H 1 0 0 1 0 3 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 10 0 1164.5775 P15924 P15924 608 617 DSP Desmoplakin yes yes 2 0.00031514 150.81 By MS/MS By MS/MS 2.4 1.02 1 2 1 1 2 3 1468100 701070 767050 6811 628 7037 16859;16860;16861;16862;16863 13653;13654 13654 2 196800 194700 IQTKEPLPTLPLGR VVTAVDPVADIATLRIQTKEPLPTLPLGRS RIQTKEPLPTLPLGRSADVRQGEFVVAMGS R I Q G R S 0 1 0 0 0 1 1 1 0 1 3 1 0 0 3 0 2 0 0 0 0 0 14 1 1561.9192 O43464 O43464 234 247 HTRA2 Serine protease HTRA2, mitochondrial yes yes 3 0.00097952 115.34 By MS/MS 7.5 0.5 1 1 2 1238100 1238100 0 6812 212 7038 16864;16865 13655 13655 1 18925 0 IQTLTSSVR FLFRKKKEEVPEFTKIQTLTSSVRESSFVE VPEFTKIQTLTSSVRESSFVEKMKKTGRNI K I Q V R E 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1003.5662 P16435 P16435 57 65 POR NADPH--cytochrome P450 reductase yes yes 2 0.0033587 112.11 By MS/MS 5 0 1 1 3134100 3134100 0 6813 634 7039 16866 13656 13656 1 31433 0 IQTQPGYANTLR FADIALAPMEAAKVRIQTQPGYANTLRDAA KVRIQTQPGYANTLRDAAPKMYKEEGLKAF R I Q L R D 1 1 1 0 0 2 0 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 12 0 1360.7099 Q00325 Q00325 190 201 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 1.6259E-08 220.5 By MS/MS By MS/MS 5 2.93 2 2 1 2 1 1 1 2 1 1 10 4 45152000 44447000 704300 6814 1259 7040 16867;16868;16869;16870;16871;16872;16873;16874;16875;16876;16877;16878;16879;16880 13657;13658;13659;13660;13661;13662;13663;13664;13665;13666;13667;13668;13669;13670 13665 14 6436300 922410 IRCEEEDVEMSEDAYTVLTR STTPYSEKDTKQILRIRCEEEDVEMSEDAY EDVEMSEDAYTVLTRIGLETSLRYAIQLIT R I R T R I 1 2 0 2 1 0 5 0 0 1 1 0 1 0 0 1 2 0 1 2 0 0 20 1 2444.0836 Q9Y230 Q9Y230 373 392 RUVBL2 RuvB-like 2 yes yes 3 1.3144E-05 130.36 By MS/MS 6 0 1 1 2953600 2953600 0 6815 2810 7041 16881 13671 13671 1176 1 20304 0 IRDEMVATEQER MGVVVATGVNTEIGKIRDEMVATEQERTPL IGKIRDEMVATEQERTPLQQKLDEFGEQLS K I R E R T 1 2 0 1 0 1 3 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 12 1 1475.7038 P16615 P16615 235 246 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 2.7133E-05 218.55 By MS/MS 2.77 1.37 3 3 3 2 2 13 9851700 9851700 0 6816 635 7042;7043 16882;16883;16884;16885;16886;16887;16888;16889;16890;16891;16892;16893;16894 13672;13673;13674;13675;13676;13677;13678;13679;13680 13675 309 9 1767700 0 IRDEMVATEQERTPLQQK MGVVVATGVNTEIGKIRDEMVATEQERTPL EMVATEQERTPLQQKLDEFGEQLSKVISLI K I R Q K L 1 2 0 1 0 3 3 0 0 1 1 1 1 0 1 0 2 0 0 1 0 0 18 2 2171.1005 P16615 P16615 235 252 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.00054449 115.38 By MS/MS 2 0 1 1 299810 299810 0 6817 635 7044 16895 13681 13681 1 101410 0 IRDMITEASQTPK SSRYQFRNLADCLQKIRDMITEASQTPKEP QKIRDMITEASQTPKEPTKEDVKLHRIRIE K I R P K E 1 1 0 1 0 1 1 0 0 2 0 1 1 0 1 1 2 0 0 0 0 0 13 1 1488.7606 Q14197 Q14197 154 166 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.00013106 184.55 By MS/MS 9 0 1 1 504910 504910 0 6818 1431 7045 16896 13682 13682 1 9936.8 0 IRDPNQGGK QPPQIAPKRERKTIRIRDPNQGGKDITEEI ERKTIRIRDPNQGGKDITEEIMSGARTAST R I R G K D 0 1 1 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 9 1 983.51484 Q04637;O43432 Q04637 182 190 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.023994 109.48 By MS/MS 2.5 1.12 1 1 1 1 4 6219700 6219700 0 6819 1291;210 7046 16897;16898;16899;16900 13683 13683 1 1797400 0 IRDPNQGGKDITEEIMSGAR QPPQIAPKRERKTIRIRDPNQGGKDITEEI QGGKDITEEIMSGARTASTPTPPQTGGGLE R I R A R T 1 2 1 2 0 1 2 3 0 3 0 1 1 0 1 1 1 0 0 0 0 0 20 2 2186.075 Q04637 Q04637 182 201 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3;4 1.1784E-05 175.52 By MS/MS 2 0 3 3 4000300 4000300 0 6820 1291 7047;7048 16901;16902;16903 13684;13685;13686 13686 769 3 1353100 0 IRDVTNNQEK VLQEVRNRSAPVYKRIRDVTNNQEKHFYTF PVYKRIRDVTNNQEKHFYTFTNEHHRETYV R I R E K H 0 1 2 1 0 1 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 10 1 1215.6208 Q9Y2L1 Q9Y2L1 109 118 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0014945 140.17 By MS/MS 4 0 1 1 722060 722060 0 6821 2834 7049 16904 13687 13687 1 67951 0 IRDWYQR KVRALEEANADLEVKIRDWYQRQRPAEIKD ANADLEVKIRDWYQRQRPAEIKDYSPYFKT K I R Q R Q 0 2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 7 1 1035.525 CON__Q04695;Q04695;CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 147 153 KRT17;KRT14;KRT16 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 3 0.038619 92.47 By MS/MS By matching 5 1.41 1 1 1 1 1 4 1 3839400 2196600 1642900 + 6822 39;47;57 7050 16905;16906;16907;16908;16909 13688 13688 1 117060 209110 IREDLPNLESSEETEQINK NDAVTIQVLNQLIQKIREDLPNLESSEETE LPNLESSEETEQINKHFHNTLEHLRLRRES K I R N K H 0 1 2 1 0 1 5 0 0 2 2 1 0 0 1 2 1 0 0 0 0 0 19 1 2243.0917 Q96QK1 Q96QK1 750 768 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 3.5825E-05 179.09 By MS/MS 5 0 1 1 3215100 3215100 0 6823 2217 7051 16910 13689 13689 1 32246 0 IREEYPDR GGGTGSGMGTLLISKIREEYPDRIMNTFSV GTLLISKIREEYPDRIMNTFSVVPSPKVSD K I R D R I 0 2 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1076.5251 P68371;Q3ZCM7;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q13885;Q9BVA1 P68371 155 162 TUBB4B;TUBB8;TUBB1;TUBB;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 0.016092 143.01 By MS/MS By matching 7.4 1.02 1 2 1 1 3 2 22848000 22183000 665050 6824 1212;509;1412;2331 7052 16911;16912;16913;16914;16915 13690 13690 1 337610 738740 IREEYPDRIMNTFSVVPSPK GGGTGSGMGTLLISKIREEYPDRIMNTFSV PDRIMNTFSVVPSPKVSDTVVEPYNATLSV K I R P K V 0 2 1 1 0 0 2 0 0 2 0 1 1 1 3 2 1 0 1 2 0 0 20 2 2377.21 P68371;P07437 P68371 155 174 TUBB4B;TUBB Tubulin beta-4B chain;Tubulin beta chain no no 3;4 0.010665 82.774 By MS/MS 6.38 0.857 1 4 2 1 8 48449000 48449000 0 6825 1212;509 7053;7054 16916;16917;16918;16919;16920;16921;16922;16923 13691;13692;13693;13694;13695 13695 208 5 364110 0 IRELTAVVQK LATRTQNVLGEKGRRIRELTAVVQKRFGFP EKGRRIRELTAVVQKRFGFPEGSVELYAEK R I R Q K R 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 10 1 1155.6976 P23396 P23396 66 75 RPS3 40S ribosomal protein S3 yes yes 2;3 0.0015684 117.53 By MS/MS 8.29 1.03 2 2 2 1 7 69351000 69351000 0 6826 703 7055 16924;16925;16926;16927;16928;16929;16930 13696;13697 13696 2 960870 0 IREPLTAQQLETTTER DGRRPTGGRLEVMVRIREPLTAQQLETTTE REPLTAQQLETTTERWLVIDPVPAAVPTQV R I R E R W 1 2 0 0 0 2 3 0 0 1 2 0 0 0 1 0 4 0 0 0 0 0 16 1 1884.9905 Q6P1N0 Q6P1N0 790 805 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 3 0.015272 119.04 By MS/MS 3 0 1 1 346030 346030 0 6827 1701 7056 16931 13698 13698 1 6331.4 0 IRGGSEGGCPR VTGVEASDDANSYWRIRGGSEGGCPRGSPV SYWRIRGGSEGGCPRGSPVRCGQAVRLTHV R I R P R G 0 2 0 0 1 0 1 4 0 1 0 0 0 0 1 1 0 0 0 0 0 0 11 1 1144.5407 Q9HCN8 Q9HCN8 84 94 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2;3 0.01787 102.95 By MS/MS 9 0 2 2 1670100 1670100 0 6828 2516 7057 16932;16933 13699;13700 13700 2 32868 0 IRGPEESQPPQLYAADEEEAPGTRDPTR ______________________________ AADEEEAPGTRDPTRLRPVYARAGLLSQAK R I R T R L 3 3 0 2 0 2 5 2 0 1 1 0 0 0 5 1 2 0 1 0 0 0 28 2 3108.4748 Q5RKV6 Q5RKV6 8 35 EXOSC6 Exosome complex component MTR3 yes yes 4 7.3231E-05 86.073 By MS/MS 8 0 1 1 1151600 1151600 0 6829 1617 7058 16934 13701 13701 1 14539 0 IRITLTSR DTGKTPVEPEVAIHRIRITLTSRNVKSLEK PEVAIHRIRITLTSRNVKSLEKVCADLIRG R I R S R N 0 2 0 0 0 0 0 0 0 2 1 0 0 0 0 1 2 0 0 0 0 0 8 1 958.59236 P60866 P60866 20 27 RPS20 40S ribosomal protein S20 yes yes 2 0.023079 127.02 By MS/MS 9.5 0.5 1 1 2 12868000 12868000 0 6830 1098 7059 16935;16936 13702 13702 1 687450 0 IRLENEIQTYR TECQNTEYQQLLDIKIRLENEIQTYRSLLE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 1 1433.7627 CON__P13645;P13645 CON__P13645 440 450 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.3273E-18 233.84 By MS/MS By MS/MS 5.6 2.91 2 3 3 2 2 2 3 3 2 3 12 13 112850000 71915000 40940000 + 6831 50 7060 16937;16938;16939;16940;16941;16942;16943;16944;16945;16946;16947;16948;16949;16950;16951;16952;16953;16954;16955;16956;16957;16958;16959;16960;16961 13703;13704;13705;13706;13707;13708;13709;13710;13711;13712;13713;13714;13715;13716;13717;13718;13719;13720;13721;13722;13723;13724;13725;13726 13705 22 3558600 11801000 IRLESEEEGVPSTAIR KGRHKTTGQVVAMKKIRLESEEEGVPSTAI RLESEEEGVPSTAIREISLLKELRHPNIVS K I R I R E 1 2 0 0 0 0 4 1 0 2 1 0 0 0 1 2 1 0 0 1 0 0 16 1 1784.9268 P06493 P06493 35 50 CDK1 Cyclin-dependent kinase 1 yes yes 2;3 0.00075351 203.85 By MS/MS 8 0 2 2 4367100 4367100 0 6832 496 7061 16962;16963 13727;13728;13729 13727 3 55135 0 IRPVPEYQK GSEGTLGVITEATIKIRPVPEYQKYGSVAF TEATIKIRPVPEYQKYGSVAFPNFEQGVAC K I R Q K Y 0 1 0 0 0 1 1 0 0 1 0 1 0 0 2 0 0 0 1 1 0 0 9 1 1128.6291 O00116 O00116 381 389 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 0.0008615 129.42 By MS/MS 5 0 1 1 1488700 1488700 0 6833 80 7062 16964 13730 13730 1 14931 0 IRQEIQELK QDELRVRRYREETTRIRQEIQELKASPKIF REETTRIRQEIQELKASPKIFQKTKCSICN R I R L K A 0 1 0 0 0 2 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1155.6612 Q9H270 Q9H270 803 811 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 0.039251 104.06 By MS/MS 4 0.816 1 1 1 3 759940 759940 0 6834 2428 7063 16965;16966;16967 13731 13731 1 47441 0 IRVDVADQAQDK LSALSLNEESLGNRRIRVDVADQAQDKDRD NRRIRVDVADQAQDKDRDDRSFGRDRNRDS R I R D K D 2 1 0 3 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 12 1 1356.6997 P23588 P23588 166 177 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0053377 123.67 By MS/MS By matching 5 0 2 1 1 557010 508280 48738 6835 708 7064 16968;16969 13732 13732 1 5097.7 40929 IRVDVADQAQDKDR LSALSLNEESLGNRRIRVDVADQAQDKDRD RIRVDVADQAQDKDRDDRSFGRDRNRDSDK R I R D R D 2 2 0 4 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 14 2 1627.8278 P23588 P23588 166 179 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.00109 120.21 By MS/MS By matching 5 0 2 1 1 1737200 1637900 99289 6836 708 7065 16970;16971 13733 13733 1 16427 83381 IRYEDEISKR EANLLQVLEKVEEFRIRYEDEISKRTDMEF VEEFRIRYEDEISKRTDMEFTFVQLKKDLD R I R K R T 0 2 0 1 0 0 2 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 10 2 1307.6834 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 169 178 KRT80 Keratin, type II cytoskeletal 80 yes no 3 0.01074 115 By MS/MS 3 0 1 1 188520 0 188520 + 6837 69 7066 16972 13734 13734 1 0 23996 IRYESLTDPSKLDSGK FLRELISNASDALDKIRYESLTDPSKLDSG RYESLTDPSKLDSGKELKIDIIPNPQERTL K I R G K E 0 1 0 2 0 0 1 1 0 1 2 2 0 0 1 3 1 0 1 0 0 0 16 2 1807.9316 P07900;P08238;Q58FF7;Q58FF8 P08238 54 69 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 3 0.00088668 119 By MS/MS 4 0 1 1 1414100 1414100 0 6838 521;513 7067 16973 13735 13735 1 133080 0 ISAEGGEQVER PQLGAYAPPPHIIGRISAEGGEQVERVVEG IIGRISAEGGEQVERVVEGPAQAMSRGTMI R I S E R V 1 1 0 0 0 1 3 2 0 1 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1173.5626 Q9BQE5 Q9BQE5 249 259 APOL2 Apolipoprotein L2 yes yes 2 1.2898E-06 187.16 By MS/MS By matching 6.5 0.5 1 1 1 1 1676600 1647800 28844 6839 2292 7068 16974;16975 13736 13736 1 25867 29556 ISAFGYLECSAK QEPVRSEEGRDMANRISAFGYLECSAKTKE ANRISAFGYLECSAKTKEGVREVFEMATRA R I S A K T 2 0 0 0 1 0 1 1 0 1 1 1 0 1 0 2 0 0 1 0 0 0 12 0 1344.6384 P08134 P08134 151 162 RHOC Rho-related GTP-binding protein RhoC yes yes 2 0.00037143 139.31 By MS/MS 9 0 1 1 794940 794940 0 6840 518 7069 16976 13737 13737 1 15644 0 ISAHSQQHNR VRDLENLGERALPYRISAHSQQHNRGGYFL ALPYRISAHSQQHNRGGYFLVDFYAPTAAV R I S N R G 1 1 1 0 0 2 0 0 2 1 0 0 0 0 0 2 0 0 0 0 0 0 10 0 1176.5748 P82932 P82932 51 60 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2;3 4.0553E-05 122.96 By MS/MS 10 0 2 2 1086000 1086000 0 6841 1238 7070 16977;16978 13738;13739 13738 2 58534 0 ISAISVAER PPEKVANIICTQPRRISAISVAERVAKERA CTQPRRISAISVAERVAKERAERVGLTVGY R I S E R V 2 1 0 0 0 0 1 0 0 2 0 0 0 0 0 2 0 0 0 1 0 0 9 0 944.5291 Q6P158;Q9H2U1 Q6P158 604 612 DHX57;DHX36 Putative ATP-dependent RNA helicase DHX57;ATP-dependent RNA helicase DHX36 no no 2 0.0023887 116.37 By MS/MS By matching 3.75 0.829 2 1 1 3 1 3154400 2114300 1040100 6842 1697;2432 7071 16979;16980;16981;16982 13740 13740 1 125260 132390 ISALALLK AKPWTKDHHYFKYCKISALALLKMVMHARS HYFKYCKISALALLKMVMHARSGGNLEVMG K I S L K M 2 0 0 0 0 0 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 0 827.54804 Q92905 Q92905 57 64 COPS5 COP9 signalosome complex subunit 5 yes yes 2 0.051818 81.784 By MS/MS 7 0 1 1 245900 245900 0 6843 2078 7072 16983 13741 13741 1 3860.2 0 ISAPQER LSEVKKLAPKDVKIRISAPQERLYSTWIGG APKDVKIRISAPQERLYSTWIGGSILASLD R I S E R L 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 7 0 799.41882 P61163 P61163 330 336 ACTR1A Alpha-centractin no no 2 0.048731 90.777 By MS/MS 7 0 1 1 9158100 9158100 0 6844 1113 7073 16984 13742 13742 1 143770 0 ISAQVVDYYK EKSMLDNRKSFLVARISAQVVDYYKEACRA FLVARISAQVVDYYKEACRALENPDTASLL R I S Y K E 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 10 0 1184.6077 Q9H3S7 Q9H3S7 206 215 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 2 0.027011 94.409 By MS/MS 2 0 1 1 233290 233290 0 6845 2441 7074 16985 13743 13743 0 78909 0 ISASLLDSR DPHHDYCEDWPEAQRISASLLDSRSYETLV WPEAQRISASLLDSRSYETLVDFDNHLDDI R I S S R S 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 3 0 0 0 0 0 0 9 0 960.52401 O43402 O43402 170 178 EMC8 ER membrane protein complex subunit 8 yes yes 2 0.00050043 146.69 By MS/MS 9.5 0.5 1 1 2 6401600 6401600 0 6846 208 7075 16986;16987 13744 13744 1 133850 0 ISATEDTPEAEGEVPELYHQR HCLSAANVIFGQTGKISATEDTPEAEGEVP TPEAEGEVPELYHQRKGEIARCWIKYCLTL K I S Q R K 2 1 0 1 0 1 5 1 1 1 1 0 0 0 2 1 2 0 1 1 0 0 21 0 2370.0975 Q96EK5 Q96EK5 286 306 KIAA1279 KIF1-binding protein yes yes 3 1.7489E-05 161.19 By MS/MS 5 0 1 1 1504000 1504000 0 6847 2144 7076 16988 13745 13745 1 15084 0 ISAVESQPSR EAPDQKTLSAPQEERISAVESQPSRKRSVS PQEERISAVESQPSRKRSVSHGSNHTQKPD R I S S R K 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 3 0 0 0 1 0 0 10 0 1072.5513 Q9Y520 Q9Y520 912 921 PRRC2C Protein PRRC2C yes yes 2 1.6161E-07 185.6 By MS/MS By matching 1.75 0.829 2 1 1 3 1 4412400 4357100 55362 6848 2905 7077 16989;16990;16991;16992 13746;13747;13748;13749 13747 4 959760 55362 ISAVSVAER DRAAECNIVVTQPRRISAVSVAERVAFERG VTQPRRISAVSVAERVAFERGEEPGKSCGY R I S E R V 2 1 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 9 0 930.51345 Q08211 Q08211 448 456 DHX9 ATP-dependent RNA helicase A yes yes 2 3.3469E-07 195.32 By MS/MS 3.5 0.5 1 1 2 1270200 1270200 0 6849 1307 7078 16993;16994 13750 13750 1 41185 0 ISAVSVAQR GRGARCNVIITQPRRISAVSVAQRVSHELG ITQPRRISAVSVAQRVSHELGPSLRRNVGF R I S Q R V 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 9 0 929.52943 Q7L2E3 Q7L2E3 494 502 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00025866 154.12 By MS/MS 4 1 1 1 2 1668100 1668100 0 6850 1761 7079 16995;16996 13751;13752 13751 2 28185 0 ISDDKYGR GGLQNMELHGMIMLRISDDKYGRIRLHVEN HGMIMLRISDDKYGRIRLHVENEDKKGVQL R I S G R I 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 8 1 952.46141 P48444 P48444 305 312 ARCN1 Coatomer subunit delta yes yes 2 0.0095386 143.89 By MS/MS 6 0 1 1 7075900 7075900 0 6851 934 7080 16997 13753 13753 1 48641 0 ISDEGIAYLVK QQQRLLDIAKKENVKISDEGIAYLVKVSEG ENVKISDEGIAYLVKVSEGDLRKAITFLQS K I S V K V 1 0 0 1 0 0 1 1 0 2 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1206.6496 P35249 P35249 222 232 RFC4 Replication factor C subunit 4 yes yes 2 2.3294E-13 239.6 By MS/MS 7.5 0.5 1 1 2 2663100 2663100 0 6852 816 7081 16998;16999 13754 13754 1 41239 0 ISDFGLATVFR IKPENLLLDERDNLKISDFGLATVFRYNNR DNLKISDFGLATVFRYNNRERLLNKMCGTL K I S F R Y 1 1 0 1 0 0 0 1 0 1 1 0 0 2 0 1 1 0 0 1 0 0 11 0 1224.6503 O14757 O14757 146 156 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 2 0.00012034 150.1 By MS/MS 6 0 1 1 421750 421750 0 6853 138 7082 17000 13755 13755 1 2899.2 0 ISDLCVALSK RKPEQHRLVVPKKGKISDLCVALSKHTGIS PKKGKISDLCVALSKHTGISPERMMVADVF K I S S K H 1 0 0 1 1 0 0 0 0 1 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1104.5849 P51784 P51784 522 531 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.0011094 121.5 By MS/MS 4 0 1 1 468350 468350 0 6854 1006 7083 17001 13756 13756 1 44074 0 ISDQNIIPSVTR QLALLLQQFQTLKMRISDQNIIPSVTRSVS KMRISDQNIIPSVTRSVSVPDTGSIWELQP R I S T R S 0 1 1 1 0 1 0 0 0 3 0 0 0 0 1 2 1 0 0 1 0 0 12 0 1341.7252 Q6Y7W6 Q6Y7W6 670 681 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 0.00079385 129 By MS/MS 3 0.816 1 1 1 3 1489300 1489300 0 6855 1738 7084 17002;17003;17004 13757;13758 13758 2 158330 0 ISDSVLVDIKDTEPLIQTAK GYEQAARVAIEHLDKISDSVLVDIKDTEPL LVDIKDTEPLIQTAKTTLGSKVVNSCHRQM K I S A K T 1 0 0 3 0 1 1 0 0 3 2 2 0 0 1 2 2 0 0 2 0 0 20 1 2184.1889 P48643 P48643 151 170 CCT5 T-complex protein 1 subunit epsilon yes yes 3 1.7798E-05 124.63 By MS/MS 6 0 1 1 3475300 3475300 0 6856 940 7085 17005 13759 13759 1 23890 0 ISDTEELPEFK TLISGAVVEQLDFLRISDTEELPEFKSFEE DFLRISDTEELPEFKSFEELEPPKHSKVKR R I S F K S 0 0 0 1 0 0 3 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1306.6293 Q93100 Q93100 673 683 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 0.00066088 128.35 By MS/MS 4 0 1 1 1262000 1262000 0 6857 2089 7086 17006 13760 13760 1 118760 0 ISDVRHSTYNSTCVGSLWIPLNR PMVLLLYAYNLKPLKISDVRHSTYNSTCVG YNSTCVGSLWIPLNRVIAIHEKLSNLAQIA K I S N R V 0 2 2 1 1 0 0 1 1 2 2 0 0 0 1 4 2 1 1 2 0 0 23 1 2674.3286 Q96N23 Q96N23 2964 2986 CFAP54 Cilia- and flagella-associated protein 54 yes yes 5 0.054458 20.256 By MS/MS 5 0 1 1 281090 281090 0 6858 2199 7087 17007 13761 13761 0 2819.2 0 ISEADKSKPK VEKWWHQRIKEQASKISEADKSKPKFYVLS EQASKISEADKSKPKFYVLSMFPYPSGKLH K I S P K F 1 0 0 1 0 0 1 0 0 1 0 3 0 0 1 2 0 0 0 0 0 0 10 2 1101.603 Q15031 Q15031 74 83 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 1.419E-09 200.56 By MS/MS 4 0 1 1 461370 461370 0 6859 1477 7088 17008 13762 13762 1 43418 0 ISEAETLCTK WSLSQAVTGLIDTGRISEAETLCTKNLKSN IDTGRISEAETLCTKNLKSNPDQPAVILLL R I S T K N 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1150.554 Q6PGP7 Q6PGP7 1342 1351 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 1.8131E-07 183.43 By MS/MS 3 0 1 1 874730 874730 0 6860 1716 7089 17009 13763 13763 1 16005 0 ISEDKNPDYR RNEGTATYAAAVLFRISEDKNPDYRKRVSV AVLFRISEDKNPDYRKRVSVELTNSLFKHD R I S Y R K 0 1 1 2 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 10 1 1235.5782 P14923 P14923 652 661 JUP Junction plakoglobin yes yes 2 0.0023156 136.52 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 2583000 379350 2203600 6861 621 7090 17010;17011 13764;13765 13765 2 35699 280490 ISEIEDAAFLAR ITYGQKVMEKETEKKISEIEDAAFLAREKA EKKISEIEDAAFLAREKAKADAECYTAMKI K I S A R E 3 1 0 1 0 0 2 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 12 0 1333.6878 O94905;O75477 O94905 242 253 ERLIN2;ERLIN1 Erlin-2;Erlin-1 yes no 2 5.2241E-17 217.66 By MS/MS By MS/MS 7 0 2 1 1 3873500 3873500 0 6862 375 7091 17012;17013 13766;13767 13766 2 60807 0 ISELFTLEGR HKKLLEKNDVYKQKKISELFTLEGRRQVTM YKQKKISELFTLEGRRQVTMAEASEDSPRP K I S G R R 0 1 0 0 0 0 2 1 0 1 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1163.6186 Q07864 Q07864 1183 1192 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.00089163 125.71 By MS/MS 2 0 1 1 105120 105120 0 6863 1302 7092 17014 13768 13768 1 35557 0 ISELSGCTPDPR RCQYVVTCAGLYSDRISELSGCTPDPRIVP SDRISELSGCTPDPRIVPFRGDYLLLKPEK R I S P R I 0 1 0 1 1 0 1 1 0 1 1 0 0 0 2 2 1 0 0 0 0 0 12 0 1330.6187 Q9H9P8 Q9H9P8 266 277 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.00027711 145.46 By MS/MS 7 0 1 1 1609700 1609700 0 6864 2488 7093 17015 13769 13769 1 25269 0 ISEQFTAMFR TFIGNSTAIQELFKRISEQFTAMFRRKAFL ELFKRISEQFTAMFRRKAFLHWYTGEGMDE R I S F R R 1 1 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 0 10 0 1228.591 P04350;P68371;P07437;Q13509;Q13885;Q9BVA1 P68371 381 390 TUBB4A;TUBB4B;TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 0.00059386 131.09 By MS/MS By matching 7.33 1.15 3 2 2 2 8 1 57438000 57404000 34509 6865 1212;509;1412;2331;472;1393 7094;7095 17016;17017;17018;17019;17020;17021;17022;17023;17024 13770;13771;13772;13773;13774;13775 13770 177 6 428250 35362 ISEQSDAK SQHQALLGTIRADGKISEQSDAKLKEIVTN TIRADGKISEQSDAKLKEIVTNFLAGFEA_ K I S A K L 1 0 0 1 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 8 0 876.41888 P25705 P25705 532 539 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0045756 127.46 By MS/MS 6.5 0.5 1 1 2 1134200 1134200 0 6866 723 7096 17025;17026 13776 13776 1 14596 0 ISEQSDAKLK SQHQALLGTIRADGKISEQSDAKLKEIVTN RADGKISEQSDAKLKEIVTNFLAGFEA___ K I S L K E 1 0 0 1 0 1 1 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 10 1 1117.5979 P25705 P25705 532 541 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.00076043 150.27 By MS/MS 6.33 0.471 2 1 3 8517300 8517300 0 6867 723 7097 17027;17028;17029 13777;13778 13778 2 61541 0 ISFLENNLEQLTK IDSDDTGGSAAQKQKISFLENNLEQLTKVH QKISFLENNLEQLTKVHKQLVRDNADLRCE K I S T K V 0 0 2 0 0 1 2 0 0 1 3 1 0 1 0 1 1 0 0 0 0 0 13 0 1547.8195 P33176;Q12840;O60282 P33176 832 844 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 1.1711E-07 210.95 By MS/MS 4.5 0.5 1 1 2 1127700 1127700 0 6868 800 7098 17030;17031 13779;13780 13779 2 106120 0 ISFSNIISDMK HEEESRAQRDAKRPKISFSNIISDMKVARS KRPKISFSNIISDMKVARSATARVRSRPEL K I S M K V 0 0 1 1 0 0 0 0 0 3 0 1 1 1 0 3 0 0 0 0 0 0 11 0 1253.6326 Q92665 Q92665 199 209 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0011683 118.23 By MS/MS 7 0 2 2 3995800 3995800 0 6869 2067 7099;7100 17032;17033 13781;13782;13783 13783 1003 3 62727 0 ISGAIGPCVSLNSK GFGGTLEIKTSREIKISGAIGPCVSLNSKG KISGAIGPCVSLNSKGPCVSENEIGTGGTC K I S S K G 1 0 1 0 1 0 0 2 0 2 1 1 0 0 1 3 0 0 0 1 0 0 14 0 1401.7286 Q15436 Q15436 416 429 SEC23A Protein transport protein Sec23A yes yes 2 0.0026368 110.64 By MS/MS 5 0 1 1 751940 751940 0 6870 1513 7101 17034 13784 13784 1 7541.5 0 ISGLGLTPEQK AYKTMKEDEKRYNERISGLGLTPEQKQKKA YNERISGLGLTPEQKQKKAALSASEGEEVP R I S Q K Q 0 0 0 0 0 1 1 2 0 1 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1141.6343 O95831 O95831 99 109 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.4598E-05 171.33 By MS/MS By MS/MS 7.33 1.89 2 1 1 1 1 5 1 45614000 45277000 337040 6871 429 7102 17035;17036;17037;17038;17039;17040 13785;13786;13787 13785 3 668960 283040 ISGLIYEETR KPAIRRLARRGGVKRISGLIYEETRGVLKV GGVKRISGLIYEETRGVLKVFLENVIRDAV R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 2.6172E-05 163.88 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 549480 512990 36484 6872 1170 7103 17041;17042 13788;13789;13790 13790 3 27648 36484 ISHQQNER METLEDHPVFNPAMKISHQQNERKKPPVAT VFNPAMKISHQQNERKKPPVATEGESALNF K I S E R K 0 1 1 0 0 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 8 0 1010.4894 Q7Z478 Q7Z478 319 326 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 0.015085 105.1 By MS/MS 3 0 1 1 54566 54566 0 6873 1791 7104 17043 13791 13791 1 998.41 0 ISHQSQDKK MQKQGCDCECLGGGRISHQSQDKKIHVYGY CLGGGRISHQSQDKKIHVYGYSMAYGPAQH R I S K K I 0 0 0 1 0 2 0 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 9 1 1069.5516 Q9NRX4 Q9NRX4 79 87 PHPT1 14 kDa phosphohistidine phosphatase yes yes 2 0.0048782 128.6 By MS/MS 10 0 1 1 97998 97998 0 6874 2562 7105 17044 13792 13792 1 5281.7 0 ISIGGGSCAISGGYGSR GFGSRSLYGLGGSKRISIGGGSCAISGGYG IGGGSCAISGGYGSRAGGSYGFGGAGSGFG R I S S R A 1 1 0 0 1 0 0 6 0 3 0 0 0 0 0 4 0 0 1 0 0 0 17 0 1597.7519 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 70 86 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 1.8724E-08 173.59 By MS/MS By MS/MS 4.64 2.84 2 2 2 2 1 1 1 1 1 1 4 10 19961000 4123500 15838000 + 6875 44;56;40 7106 17045;17046;17047;17048;17049;17050;17051;17052;17053;17054;17055;17056;17057;17058 13793;13794;13795;13796;13797;13798;13799;13800;13801;13802;13803;13804;13805 13795 13 390790 20091000 ISIGNVVK ______________________________ MVALSLKISIGNVVKTMQFEPSTMVYDACR K I S V K T 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 2 0 0 8 0 828.5069 Q9Y490 Q9Y490 8 15 TLN1 Talin-1 yes yes 2 0.024487 94.662 By MS/MS 2.5 0.5 1 1 2 956310 956310 0 6876 2888 7107 17059;17060 13806 13806 1 246460 0 ISISTSGGSFR GYGSRSLYNLGGSKRISISTSGGSFRNRFG GSKRISISTSGGSFRNRFGAGAGGGYGFGG R I S F R N 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 11 0 1110.5669 CON__P13647;P13647 CON__P13647 74 84 KRT5 Keratin, type II cytoskeletal 5 yes no 2 1.37E-08 194.94 By MS/MS By MS/MS 5.24 2.96 2 2 2 2 1 2 1 2 1 2 8 9 136300000 48814000 87484000 + 6877 52 7108 17061;17062;17063;17064;17065;17066;17067;17068;17069;17070;17071;17072;17073;17074;17075;17076;17077 13807;13808;13809;13810;13811;13812;13813;13814;13815;13816;13817;13818;13819;13820;13821;13822;13823;13824 13813 18 3929400 61083000 ISITEGIER SSPIAAIFDTENLEKISITEGIERGIVDSI TENLEKISITEGIERGIVDSITGQRLLEAQ K I S E R G 0 1 0 0 0 0 2 1 0 3 0 0 0 0 0 1 1 0 0 0 0 0 9 0 1016.5502 P15924 P15924 2631 2639 DSP Desmoplakin yes yes 2 0.00071286 134.77 By MS/MS 1.5 0.5 1 1 2 970590 970590 0 6878 628 7109 17078;17079 13825 13825 1 302700 0 ISKGANPVEIR ATVLARSIAKEGFEKISKGANPVEIRRGVM GFEKISKGANPVEIRRGVMLAVDAVIAELK K I S I R R 1 1 1 0 0 0 1 1 0 2 0 1 0 0 1 1 0 0 0 1 0 0 11 1 1182.6721 P10809 P10809 131 141 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.026467 74.237 By MS/MS 7 0.816 1 1 1 3 2242300 2242300 0 6879 569 7110 17080;17081;17082 13826 13826 1 23981 0 ISLADIAQK VIKTGVRMISLSYSRISLADIAQKLQLDSP SLSYSRISLADIAQKLQLDSPEDAEFIVAK R I S Q K L 2 0 0 1 0 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 0 957.5495 O43242 O43242 417 425 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 5.4529E-07 190.26 By MS/MS 5.5 0.5 1 1 2 8536900 8536900 0 6880 198 7111 17083;17084 13827 13827 1 61996 0 ISLDQIDLLSTK SYTGQDYSTQGNVGKISLDQIDLLSTKSFP VGKISLDQIDLLSTKSFPPCMRQLHKALRE K I S T K S 0 0 0 2 0 1 0 0 0 2 3 1 0 0 0 2 1 0 0 0 0 0 12 0 1344.75 P49643 P49643 271 282 PRIM2 DNA primase large subunit yes yes 2 8.283E-09 217.02 By MS/MS 6 0 1 1 815360 815360 0 6881 954 7112 17085 13828 13828 1 5604.9 0 ISLEDIQAFEK QDRDWEAYWRLLFKKISLEDIQAFEKTYKG LFKKISLEDIQAFEKTYKGSEEELADIKQA K I S E K T 1 0 0 1 0 1 2 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1291.666 Q8WXX5 Q8WXX5 108 118 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 2 9.0777E-05 152.69 By MS/MS 8 0 1 1 248540 248540 0 6882 2041 7113 17086 13829 13829 1 3137.8 0 ISLESEYEK SKMDPELEKKLKENKISLESEYEKIKDSKF KLKENKISLESEYEKIKDSKFDDWKNIRGP K I S E K I 0 0 0 0 0 0 3 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 9 0 1096.5288 Q9P0S2 Q9P0S2 61 69 COX16 Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial yes yes 2 0.0046557 104.01 By MS/MS 10 0 1 1 815030 815030 0 6883 2668 7114 17087 13830 13830 1 43927 0 ISLGLPVGAVINCADNTGAK MSKRGRGGSSGAKFRISLGLPVGAVINCAD PVGAVINCADNTGAKNLYIISVKGIKGRLN R I S A K N 3 0 2 1 1 0 0 3 0 2 2 1 0 0 1 1 1 0 0 2 0 0 20 0 1969.0303 P62829 P62829 16 35 RPL23 60S ribosomal protein L23 yes yes 2;3 1.0013E-12 226.7 By MS/MS 10 0 3 3 3523000 3523000 0 6884 1173 7115 17088;17089;17090 13831;13832;13833;13834;13835 13835 5 189880 0 ISLIQIFR DLTGIFMHGKIPTLKISLIQIFRAHLWQKI GKIPTLKISLIQIFRAHLWQKIHESIVMDL K I S F R A 0 1 0 0 0 1 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 0 8 0 988.60695 Q6P2Q9 Q6P2Q9 1571 1578 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0099451 110.81 By MS/MS 2 0 1 1 86920 86920 0 6885 1708 7116 17091 13836 13836 1 29400 0 ISLPVILMDETLK QITPLNVTQWLMVLKISLPVILMDETLKFV LKISLPVILMDETLKFVARNYLEPGKECVQ K I S L K F 0 0 0 1 0 0 1 0 0 2 3 1 1 0 1 1 1 0 0 1 0 0 13 0 1470.8368 P16615 P16615 972 984 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.0014556 117.02 By MS/MS 2.33 1.25 1 1 1 3 369330 369330 0 6886 635 7117 17092;17093;17094 13837;13838;13839;13840;13841 13839 310 5 75291 0 ISLQIGDIK YYPEQEPQLLSGIGRISLQIGDIKTAEKYF LSGIGRISLQIGDIKTAEKYFQDVEKVTQK R I S I K T 0 0 0 1 0 1 0 1 0 3 1 1 0 0 0 1 0 0 0 0 0 0 9 0 985.5808 Q8WVT3 Q8WVT3 589 597 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.013438 94.409 By MS/MS 3.5 0.5 1 1 2 911730 911730 0 6887 2029 7118 17095;17096 13842 13842 1 79863 0 ISLSTLQQQLGQPEK YGKVVDLAPLHLDARISLSTLQQQLGQPEK ISLSTLQQQLGQPEKALEALEPMYDPDTLA R I S E K A 0 0 0 0 0 4 1 1 0 1 3 1 0 0 1 2 1 0 0 0 0 0 15 0 1668.9046 Q9Y5Q9 Q9Y5Q9 494 508 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 6.1851E-05 215.02 By MS/MS 4 0 1 1 1647100 1647100 0 6888 2920 7119 17097 13843 13843 1 155010 0 ISNIPSLIFLDATTGK YKEKHRKLKLWNKYRISNIPSLIFLDATTG SNIPSLIFLDATTGKVVCRNGLLVIRDDPE R I S G K V 1 0 1 1 0 0 0 1 0 3 2 1 0 1 1 2 2 0 0 0 0 0 16 0 1688.9349 Q6DKJ4 Q6DKJ4 129 144 NXN Nucleoredoxin yes yes 2 0.0081802 91.812 By MS/MS 6 0 1 1 111880 111880 0 6889 1675 7120 17098 13844 13844 1 769.12 0 ISNSSTANR NDPLVRSAIEQVRFRISNSSTANRVKTSQP EQVRFRISNSSTANRVKTSQPPVPQGEAEE R I S N R V 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 948.46247 Q12789 Q12789 714 722 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 2.7157E-05 175.91 By MS/MS 2 0 1 1 222230 222230 0 6890 1328 7121 17099 13845 13845 1 75166 0 ISNYGWDQSDKFVK PAAVVAPITTGYTVKISNYGWDQSDKFVKI KISNYGWDQSDKFVKIYITLTGVHQVPTEN K I S V K I 0 0 1 2 0 1 0 1 0 1 0 2 0 1 0 2 0 1 1 1 0 0 14 1 1685.8049 Q9HB71 Q9HB71 75 88 CACYBP Calcyclin-binding protein yes yes 2 0.0022838 144.7 By MS/MS 8 0 1 1 1596200 1596200 0 6891 2501 7122 17100 13846 13846 1 20152 0 ISQATAQIK DFSSIIQTCSGNIQRISQATAQIKNLMSQL SGNIQRISQATAQIKNLMSQLGTKQDSSKL R I S I K N 2 0 0 0 0 2 0 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 9 0 958.54475 Q86Y82 Q86Y82 36 44 STX12 Syntaxin-12 yes yes 2 0.00049743 146.79 By MS/MS 7 0 1 1 835920 835920 0 6892 1851 7123 17101 13847 13847 1 13122 0 ISQDLALIAR DYIRDWTAHREEIARISQDLALIAREINDV EEIARISQDLALIAREINDVAGEIDSVTSS R I S A R E 2 1 0 1 0 1 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1098.6397 Q5SW79;Q96L14 Q5SW79 1305 1314 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 2 2.7268E-05 163.16 By MS/MS 3 1.41 1 1 1 1 1 5 4700400 4700400 0 6893 1623 7124 17102;17103;17104;17105;17106 13848;13849;13850 13848 3 1099200 0 ISQGNISK PENAAEIKLTMAQLKISQGNISKACLILRS LTMAQLKISQGNISKACLILRSIEELKHKP K I S S K A 0 0 1 0 0 1 0 1 0 2 0 1 0 0 0 2 0 0 0 0 0 0 8 0 845.46068 O76094 O76094 384 391 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.023865 95.352 By MS/MS 4.5 0.5 1 1 2 4008400 4008400 0 6894 362 7125 17107;17108 13851 13851 1 55577 0 ISQLQAELR PLRAAAEQLRQKDLRISQLQAELRRPPPAP RQKDLRISQLQAELRRPPPAPAQPPEPEAL R I S L R R 1 1 0 0 0 2 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1056.5928 O94766 O94766 51 59 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 0.021845 88.134 By MS/MS 9 0 1 1 275740 275740 0 6895 364 7126 17109 13852 13852 1 5426.5 0 ISQSNYIPTQQDVLR QLNDSASYYLNDLDRISQSNYIPTQQDVLR ISQSNYIPTQQDVLRTRVKTTGIVETHFTF R I S L R T 0 1 1 1 0 3 0 0 0 2 1 0 0 0 1 2 1 0 1 1 0 0 15 0 1760.9057 P08754 P08754 162 176 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 2 2.2679E-07 218.02 By MS/MS 7.5 0.5 1 1 2 2744400 2744400 0 6896 528 7127 17110;17111 13853 13853 1 41988 0 ISQSQPVR QSQSSYIIRNPQQRRISQSQPVRGRDEEQD RNPQQRRISQSQPVRGRDEEQDDIVSADVE R I S V R G 0 1 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 8 0 913.49813 O95071 O95071 1548 1555 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0014206 143.61 By MS/MS 2 0.816 1 1 1 3 766340 766340 0 6897 384 7128 17112;17113;17114 13854;13855 13854 2 211810 0 ISREECDKYALQSQQR LPMAMTAENLAVKHKISREECDKYALQSQQ SREECDKYALQSQQRWKAANDAGYFNDEMA K I S Q R W 1 2 0 1 1 3 2 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 16 2 2009.9589 P42765 P42765 174 189 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.0062908 94.339 By MS/MS 7 0 1 1 1295200 1295200 0 6898 887 7129 17115 13856 13856 1 20332 0 ISRPGDSDDSR IAGHPAFVNYSTSQKISRPGDSDDSRSVNS TSQKISRPGDSDDSRSVNSVLLFTILNPIY K I S S R S 0 2 0 3 0 0 0 1 0 1 0 0 0 0 1 3 0 0 0 0 0 0 11 1 1203.548 P14866 P14866 179 189 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 2 0.036121 97.813 By MS/MS 6 0 1 1 1092200 1092200 0 6899 619 7130 17116 13857 13857 1 7508.3 0 ISRPHPSTAESK RRTLFRGRRRREDDRISRPHPSTAESKAPT DDRISRPHPSTAESKAPTPKFDLLASNFPP R I S S K A 1 1 0 0 0 0 1 0 1 1 0 1 0 0 2 3 1 0 0 0 0 0 12 1 1308.6786 Q71RC2 Q71RC2 460 471 LARP4 La-related protein 4 yes yes 3 0.047622 94.538 By MS/MS 4.5 0.5 1 1 2 810030 810030 0 6900 1750 7131 17117;17118 13858 13858 1 62905 0 ISSAACGYGFTLLSSK RRIQPVPYRLELDQKISSAACGYGFTLLSS SSAACGYGFTLLSSKTADVTKVWGMGLNKD K I S S K T 2 0 0 0 1 0 0 2 0 1 2 1 0 1 0 4 1 0 1 0 0 0 16 0 1660.8131 Q96I51 Q96I51 109 124 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 0.000272 135.81 By MS/MS 7 0 1 1 469320 469320 0 6901 2170 7132 17119 13859 13859 1 7367.5 0 ISSAVLK VELPTLEELKVDEVKISSAVLKAAAHHYGA ELKVDEVKISSAVLKAAAHHYGAQCDKPNK K I S L K A 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 7 0 716.44324 P51970 P51970 20 26 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 0.018013 114.59 By MS/MS 9 0 1 1 678260 678260 0 6902 1010 7133 17120 13860 13860 1 13348 0 ISSDQLSSEHLSSAVEQK GFGVTQETEFSIPHKISSDQLSSEHLSSAV DQLSSEHLSSAVEQKIASPNRILSDEKNYA K I S Q K I 1 0 0 1 0 2 2 0 1 1 2 1 0 0 0 6 0 0 0 1 0 0 18 0 1943.9436 A3KMH1 A3KMH1 1335 1352 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 3 0.018181 77.191 By MS/MS 2 0 1 1 885810 885810 0 6903 14 7134 17121 13861 13861 1 299620 0 ISSIQSIVPALEIANAHR KCEFQDAYVLLSEKKISSIQSIVPALEIAN IQSIVPALEIANAHRKPLVIIAEDVDGEAL K I S H R K 3 1 1 0 0 1 1 0 1 4 1 0 0 0 1 3 0 0 0 1 0 0 18 0 1918.0636 P10809 P10809 251 268 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.00052471 116.35 By MS/MS 6.33 0.471 2 1 3 4781200 4781200 0 6904 569 7135 17122;17123;17124 13862;13863 13862 1 33728 0 ISSIYAR EGSSQGEDSVSGSQRISSIYAREALIEIDY DSVSGSQRISSIYAREALIEIDYGDLCEDL R I S A R E 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 0 7 0 808.4443 Q14683 Q14683 969 975 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.01823 114.02 By MS/MS 3 0 1 1 1024500 1024500 0 6905 1451 7136 17125 13864 13864 1 18746 0 ISSLLEEQFQQGK KKIQKKYDERKKNAKISSLLEEQFQQGKLL AKISSLLEEQFQQGKLLACIASRPGQCGRA K I S G K L 0 0 0 0 0 3 2 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1505.7726 P62241 P62241 158 170 RPS8 40S ribosomal protein S8 yes yes 2;3 6.9046E-70 367.44 By MS/MS 5.91 2.91 1 1 1 1 1 1 3 1 1 11 195600000 195600000 0 6906 1143 7137 17126;17127;17128;17129;17130;17131;17132;17133;17134;17135;17136 13865;13866;13867;13868;13869;13870;13871;13872;13873 13872 9 2767500 0 ISSSKGSLGGGFSSGGFSGGSFSR GGGGCGGGGGVSSLRISSSKGSLGGGFSSG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY R I S S R G 0 1 0 0 0 0 0 8 0 1 1 1 0 3 0 9 0 0 0 0 0 0 24 1 2209.04 CON__P13645;P13645 CON__P13645 36 59 KRT10 Keratin, type I cytoskeletal 10 yes no 3 4.2202E-05 94.72 By matching By MS/MS 5.17 3.53 1 2 1 2 2 4 987960 451180 536780 + 6907 50 7138 17137;17138;17139;17140;17141;17142 13874;13875;13876;13877;13878 13875 5 79740 786700 ISSTLYQAAAPVLTPAK TCFIFSMVGLYYINKISSTLYQAAAPVLTP STLYQAAAPVLTPAKVTGKSKKRN______ K I S A K V 4 0 0 0 0 1 0 0 0 1 2 1 0 0 2 2 2 0 1 1 0 0 17 0 1729.9614 Q8N6L1 Q8N6L1 111 127 KRTCAP2 Keratinocyte-associated protein 2 yes yes 2 5.577E-07 211.83 By MS/MS 10 0 1 1 892450 892450 0 6908 1928 7139 17143 13879 13879 1 48100 0 ISSVLAGGSCR GSCGIGGGIGGGSSRISSVLAGGSCRAPST GSSRISSVLAGGSCRAPSTYGGGLSVSSSR R I S C R A 1 1 0 0 1 0 0 2 0 1 1 0 0 0 0 3 0 0 0 1 0 0 11 0 1105.555 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 31 41 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 3.3358E-06 179.42 By MS/MS By MS/MS 5.12 2.91 2 2 2 2 2 1 2 1 1 2 8 9 46984000 8615900 38368000 + 6909 39;47 7140 17144;17145;17146;17147;17148;17149;17150;17151;17152;17153;17154;17155;17156;17157;17158;17159;17160 13880;13881;13882;13883;13884;13885;13886;13887;13888;13889;13890;13891;13892;13893;13894;13895 13890 16 654700 45800000 ISSVLAGGSCRAPSTYGGGLSVSSR GSCGIGGGIGGGSSRISSVLAGGSCRAPST RAPSTYGGGLSVSSRFSSGGACGLGGGYGG R I S S R F 2 2 0 0 1 0 0 5 0 1 2 0 0 0 1 7 1 0 1 2 0 0 25 1 2425.202 CON__P08779;P08779 CON__P08779 31 55 KRT16 Keratin, type I cytoskeletal 16 yes no 3 2.7237E-06 114.78 By MS/MS 8 0 1 1 62655 0 62655 + 6910 47 7141 17161 13896 13896 1 0 84550 ISTEVGITNVDLSTVDKDQSIAPK GDNRYIANTVELRVKISTEVGITNVDLSTV VDLSTVDKDQSIAPKTTRVTYPAKAKGTFI K I S P K T 1 0 1 3 0 1 1 1 0 3 1 2 0 0 1 3 3 0 0 3 0 0 24 1 2529.3174 P04844 P04844 369 392 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 3 0.0032256 75.334 By MS/MS 6 0 1 1 2049700 2049700 0 6911 479 7142 17162 13897 13897 1 14090 0 ISTITPQIQAFNLQK LEITKLDSSIISEGKISTITPQIQAFNLQK ISTITPQIQAFNLQKAAAEGLMSLLREMGK K I S Q K A 1 0 1 0 0 3 0 0 0 3 1 1 0 1 1 1 2 0 0 0 0 0 15 0 1700.9461 P30260 P30260 442 456 CDC27 Cell division cycle protein 27 homolog yes yes 2 0.00050934 163.12 By MS/MS 4.5 0.5 1 1 2 988740 988740 0 6912 771 7143 17163;17164 13898 13898 1 78302 0 ISTLPQLNSALVQDLAK HMTVKNKYATSKHAKISTLPQLNSALVQDL TLPQLNSALVQDLAKAVAKV__________ K I S A K A 2 0 1 1 0 2 0 0 0 1 4 1 0 0 1 2 1 0 0 1 0 0 17 0 1810.02 P14635 P14635 412 428 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 2 0.00022901 146.84 By MS/MS 6 0 1 1 731580 731580 0 6913 616 7144 17165 13899;13900 13899 2 5029.1 0 ISTVVSSK ADNKCLLRATDGKKKISTVVSSKEVNKFQM ATDGKKKISTVVSSKEVNKFQMAYSNLLRA K I S S K E 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 3 1 0 0 2 0 0 8 0 819.47018 P37108 P37108 67 74 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.0007823 155 By MS/MS 10 0 1 1 1920900 1920900 0 6914 844 7145 17166 13901 13901 1 103530 0 ISVAAASK LARQCRIYELRNKERISVAAASKLLANMVY ELRNKERISVAAASKLLANMVYQYKGMGLS R I S S K L 3 0 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 8 0 745.4334 P28074 P28074 133 140 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.036301 87.696 By MS/MS 9.5 0.5 1 1 2 3465900 3465900 0 6915 751 7146 17167;17168 13902 13902 1 75528 0 ISVESIPSLR AIQEGSITRGTPTSKISVESIPSLRGSITQ TPTSKISVESIPSLRGSITQGTPALPQTGI K I S L R G 0 1 0 0 0 0 1 0 0 2 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1099.6237 O75376 O75376 1153 1162 NCOR1 Nuclear receptor corepressor 1 yes yes 2 0.046202 74.165 By MS/MS 2 0 1 1 81770 81770 0 6916 316 7147 17169 13903 13903 1 27658 0 ISVNDFIIK LVRKELNKILEGRSKISVNDFIIKASALAC LEGRSKISVNDFIIKASALACLKVPEANSS K I S I K A 0 0 1 1 0 0 0 0 0 3 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1047.5964 P10515 P10515 474 482 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 6.1601E-05 163.15 By MS/MS By matching 5.33 0.471 2 1 2 1 3602600 3552600 50006 6917 561 7148 17170;17171;17172 13904 13904 1 35087 41994 ISVREPMQTGIK TRRRVGLKAPGIIPRISVREPMQTGIKAVD IPRISVREPMQTGIKAVDSLVPIGRGQREL R I S I K A 0 1 0 0 0 1 1 1 0 2 0 1 1 0 1 1 1 0 0 1 0 0 12 1 1357.7388 P25705 P25705 183 194 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.0017237 140.78 By MS/MS 7.2 1.17 2 1 1 1 5 20974000 20974000 0 6918 723 7149 17173;17174;17175;17176;17177 13905;13906 13905 2 159190 0 ISVSFYHVK PNGSKFAVLHGEAPRISVSFYHVKNNGKIE HGEAPRISVSFYHVKNNGKIELIKMFDKQQ R I S V K N 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 2 0 0 1 2 0 0 9 0 1078.5811 P55884 P55884 587 595 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.048772 76.478 By MS/MS 5.33 1.25 1 1 1 3 5770300 5770300 0 6919 1065 7150 17178;17179;17180 13907;13908 13907 2 452760 0 ISVYYNEATGGK PTGTYHGDSDLQLDRISVYYNEATGGKYVP LDRISVYYNEATGGKYVPRAILVDLEPGTM R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 0 12 0 1300.6299 P07437 P07437 47 58 TUBB Tubulin beta chain yes yes 2 2.1137E-18 266.26 By MS/MS By MS/MS 7.22 1.4 4 2 1 1 1 8 1 514320000 512830000 1490400 6920 509 7151 17181;17182;17183;17184;17185;17186;17187;17188;17189 13909;13910;13911;13912;13913;13914;13915;13916;13917 13915 9 4186800 1527300 ISVYYNEATGGKYVPR PTGTYHGDSDLQLDRISVYYNEATGGKYVP SVYYNEATGGKYVPRAILVDLEPGTMDSVR R I S P R A 1 1 1 0 0 0 1 2 0 1 0 1 0 0 1 1 1 0 3 2 0 0 16 1 1815.9155 P07437 P07437 47 62 TUBB Tubulin beta chain yes yes 2;3 0.00061586 160.22 By MS/MS By MS/MS 6.67 0.745 3 2 1 5 1 98544000 98395000 148990 6921 509 7152 17190;17191;17192;17193;17194;17195 13918;13919;13920 13920 3 705240 152670 ISYSLFTALR LYWVGAGTVAYLALRISYSLFTALRVWGVG YLALRISYSLFTALRVWGVGNEAGVGPGLG R I S L R V 1 1 0 0 0 0 0 0 0 1 2 0 0 1 0 2 1 0 1 0 0 0 10 0 1169.6445 Q53GQ0 Q53GQ0 26 35 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 2.2788E-06 179.51 By MS/MS 8 0 1 1 1015400 1015400 0 6922 1587 7153 17196 13921 13921 1 12819 0 ITAASQEHGLK RYLKKKNMRTLWINRITAASQEHGLKYPAL WINRITAASQEHGLKYPALIGNLVKCQVEL R I T L K Y 2 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1153.6091 Q9BYC9 Q9BYC9 72 82 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 8.2167E-06 174.86 By MS/MS 9 0 1 1 989050 989050 0 6923 2367 7154 17197 13922 13922 1 19465 0 ITAHLVHELR GAIALGHPLGGSGSRITAHLVHELRRRGGK GSGSRITAHLVHELRRRGGKYAVGSACIGG R I T L R R 1 1 0 0 0 0 1 0 2 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1187.6775 P42765 P42765 361 370 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.0067669 99.013 By MS/MS 7 0 1 1 875200 875200 0 6924 887 7155 17198 13923 13923 1 13739 0 ITALEDISTEDGDR MGTLLNTAISEVIGKITALEDISTEDGDRL KITALEDISTEDGDRLYSLCKTVMDEGPQV K I T D R L 1 1 0 3 0 0 2 1 0 2 1 0 0 0 0 1 2 0 0 0 0 0 14 0 1533.7158 O43264 O43264 668 681 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.5598E-07 207.95 By MS/MS 4 0 1 1 1963500 1963500 0 6925 200 7156 17199 13924 13924 1 184780 0 ITCLCQVPQNAANR QTSAMLFTVDNEAGKITCLCQVPQNAANRG KITCLCQVPQNAANRGLKASEWVQQVSGLM K I T N R G 2 1 2 0 2 2 0 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 14 0 1643.7872 P49588 P49588 899 912 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 5.2605E-11 231.07 By MS/MS 6.33 1.7 1 1 1 3 3777600 3777600 0 6926 951 7157 17200;17201;17202 13925;13926 13925 2 281590 0 ITDAFSSLAK ESKVSKLVTDKAAGKITDAFSSLAKRSNFR KAAGKITDAFSSLAKRSNFRAISKKLNLIP K I T A K R 2 0 0 1 0 0 0 0 0 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1051.555 Q9H267 Q9H267 471 480 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 2 0.011013 92.051 By MS/MS 5 0 1 1 921160 921160 0 6927 2426 7158 17203 13927;13928 13927 2 9238.8 0 ITDFGLAR LQPIESDDMEHKTLKITDFGLAREWHKTTQ MEHKTLKITDFGLAREWHKTTQMSAAGTYA K I T A R E 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 891.48142 Q16584;Q02779;Q5TCX8;P80192;P04626;Q15303 Q16584 265 272 MAP3K11;MAP3K10;MLK4;MAP3K9;ERBB2;ERBB4 Mitogen-activated protein kinase kinase kinase 11;Mitogen-activated protein kinase kinase kinase 10;Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9;Receptor tyrosine-protein kinase erbB-2;Receptor tyrosine-protein kinase erbB-4;ERBB4 intracellular domain yes no 2 0.0049312 125.81 By MS/MS 4 0.816 1 1 1 3 791120 791120 0 6928 475 7159 17204;17205;17206 13929 13929 1 41227 0 ITDGTMLQAIER KEDVYRGPAIRALCRITDGTMLQAIERYMK LCRITDGTMLQAIERYMKQAIVDKVSSVSS R I T E R Y 1 1 0 1 0 1 1 1 0 2 1 0 1 0 0 0 2 0 0 0 0 0 12 0 1346.6864 Q9UBF2 Q9UBF2 131 142 COPG2 Coatomer subunit gamma-2 yes yes 2 1.6489E-12 233.13 By MS/MS 4.5 0.5 1 1 2 4273900 4273900 0 6929 2697 7160 17207;17208 13930;13931 13930 2 356850 0 ITDLLPNITR GSPESTKLQTLPVSRITDLLPNITRNGAFI LPVSRITDLLPNITRNGAFINWKEAKLTWS R I T T R N 0 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 2 0 0 0 0 0 10 0 1154.6659 Q96AA3 Q96AA3 221 230 RFT1 Protein RFT1 homolog yes yes 2 0.00067763 129.85 By MS/MS 1.5 0.5 1 1 2 415620 415620 0 6930 2106 7161 17209;17210 13932;13933 13932 2 121400 0 ITDSAGHILYSK SDQSGGAGGLRSHLKITDSAGHILYSKEDA HLKITDSAGHILYSKEDATKGKFAFTTEDY K I T S K E 1 0 0 1 0 0 0 1 1 2 1 1 0 0 0 2 1 0 1 0 0 0 12 0 1303.6772 P49755 P49755 76 87 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2;3 1.6602E-08 208.15 By MS/MS 9 0 2 2 2450000 2450000 0 6931 961 7162 17211;17212 13934;13935 13934 2 48215 0 ITDSAGHILYSKEDATK SDQSGGAGGLRSHLKITDSAGHILYSKEDA DSAGHILYSKEDATKGKFAFTTEDYDMFEV K I T T K G 2 0 0 2 0 0 1 1 1 2 1 2 0 0 0 2 2 0 1 0 0 0 17 1 1847.9265 P49755 P49755 76 92 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2;3;4 0.0021773 163.33 By MS/MS 9 0 3 3 6731700 6731700 0 6932 961 7163 17213;17214;17215 13936;13937;13938 13936 3 132480 0 ITEAVATATEQR SNSDLSGRCAELQVRITEAVATATEQRELI QVRITEAVATATEQRELIARLEQDLSIIQS R I T Q R E 3 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 3 0 0 1 0 0 12 0 1288.6623 Q13948 Q13948 428 439 CUX1 Protein CASP yes yes 2 1.2351E-08 242.97 By MS/MS 5.5 0.5 1 1 2 1248100 1248100 0 6933 1415 7164 17216;17217 13939 13939 1 10812 0 ITELKEEIEVK EDQQKINKFARNTSRITELKEEIEVKKKQL NTSRITELKEEIEVKKKQLQNLEDACDDIM R I T V K K 0 0 0 0 0 0 4 0 0 2 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1329.7391 Q9NQP4 Q9NQP4 33 43 PFDN4 Prefoldin subunit 4 yes yes 2 3.1426E-05 176.6 By MS/MS 9.5 0.5 1 1 2 1421300 1421300 0 6934 2538 7165 17218;17219 13940 13940 1 67221 0 ITELMQVLK LAGREMTRLAGFTARITELMQVLKDLNHGK AGFTARITELMQVLKDLNHGKYERTMVSQQ R I T L K D 0 0 0 0 0 1 1 0 0 1 2 1 1 0 0 0 1 0 0 1 0 0 9 0 1073.6155 P28288 P28288 391 399 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.00067944 141.2 By MS/MS 5 0 1 1 707470 707470 0 6935 752 7166 17220 13941 13941 1 7095.6 0 ITENASDADLWLLNSCTVK DGEYMAGQLAAYGYKITENASDADLWLLNS ASDADLWLLNSCTVKNPAEDHFRNSIKKAQ K I T V K N 2 0 2 2 1 0 1 0 0 1 3 1 0 0 0 2 2 1 0 1 0 0 19 0 2149.0361 Q5VV42 Q5VV42 94 112 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 3.9549E-12 289.61 By MS/MS 6 0 1 1 1077900 1077900 0 6936 1652 7167 17221 13942 13942 1 7409.5 0 ITFDAFPGEPDKELNPK IEILAPPNGSVPGDRITFDAFPGEPDKELN FDAFPGEPDKELNPKKKIWEQIQPDLHTND R I T P K K 1 0 1 2 0 0 2 1 0 1 1 2 0 2 3 0 1 0 0 0 0 0 17 1 1916.952 Q12904 Q12904 251 267 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.0022577 151.16 By MS/MS 7 0 1 1 2721000 2721000 0 6937 1337 7168 17222 13943 13943 1 42715 0 ITGCASPGK LAEEVNLNGSGKLLKITGCASPGKTVTIVV SGKLLKITGCASPGKTVTIVVRGSNKLVIE K I T G K T 1 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 0 889.43275 P50991 P50991 376 384 CCT4 T-complex protein 1 subunit delta yes yes 2 0.00038098 150.36 By MS/MS 6.5 1.12 1 1 1 1 4 24507000 24507000 0 6938 985 7169 17223;17224;17225;17226 13944;13945 13944 2 190300 0 ITGEAFVQFASQELAEK IVPNGITLPVDPEGKITGEAFVQFASQELA GEAFVQFASQELAEKALGKHKERIGHRYIE K I T E K A 3 0 0 0 0 2 3 1 0 1 1 1 0 2 0 1 1 0 0 1 0 0 17 0 1866.9363 P52597 P52597 151 167 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 2 0.00019126 178.84 By MS/MS 6.5 0.5 1 1 2 149660 149660 0 6939 1019 7170 17227;17228 13946;13947 13947 2 1666.8 0 ITGLCQEEHR LSQFIRPHGGMLPRKITGLCQEEHRKIEEC MLPRKITGLCQEEHRKIEECVKMAHRAGLL K I T H R K 0 1 0 0 1 1 2 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1241.5823 Q9NVS2 Q9NVS2 104 113 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 6.7187E-05 156.16 By MS/MS 9 0 1 1 284500 284500 0 6940 2602 7171 17229 13948 13948 1 5599.1 0 ITGTKEGIEK KIQIPRPDDPSNQIKITGTKEGIEKARHEV SNQIKITGTKEGIEKARHEVLLISAEQDKR K I T E K A 0 0 0 0 0 0 2 2 0 2 0 2 0 0 0 0 2 0 0 0 0 0 10 1 1074.5921 Q00341 Q00341 198 207 HDLBP Vigilin yes yes 2 0.0029481 131.12 By MS/MS 4 0.816 1 1 1 3 1321200 1321200 0 6941 1260 7172 17230;17231;17232 13949 13949 1 35378 0 ITIADCGQLE AMERFGSRNGKTSKKITIADCGQLE_____ KTSKKITIADCGQLE_______________ K I T L E - 1 0 0 1 1 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1118.5278 P62937 P62937 156 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 3.016E-05 161.27 By MS/MS 10 0 1 1 2348000 2348000 0 6942 1188 7173 17233 13950 13950 1 126550 0 ITIGQAPTEK TWQRVLDTNDRFLRKITIGQAPTEKGHTRT RFLRKITIGQAPTEKGHTRTAQFDISVASE K I T E K G 1 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 2 0 0 0 0 0 10 0 1056.5815 P11586 P11586 544 553 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00031514 128.35 By MS/MS 4.5 0.5 1 1 2 2536600 2536600 0 6943 582 7174 17234;17235 13951 13951 1 216460 0 ITIGQGNTEK TWQRVLDTNDRFLRKITIGQGNTEKGHYRQ RFLRKITIGQGNTEKGHYRQAQFDIAVASE K I T E K G 0 0 1 0 0 1 1 2 0 2 0 1 0 0 0 0 2 0 0 0 0 0 10 0 1059.556 Q6UB35 Q6UB35 587 596 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0024766 89.029 By MS/MS 4.5 0.5 1 1 2 1443700 1443700 0 6944 1728 7175 17236;17237 13952 13952 1 123460 0 ITITNDKGR LNVSAVDKSTGKENKITITNDKGRLSKEDI TGKENKITITNDKGRLSKEDIERMVQEAEK K I T G R L 0 1 1 1 0 0 0 1 0 2 0 1 0 0 0 0 2 0 0 0 0 0 9 1 1016.5615 P11142;P54652;P0DMV9;P0DMV8;P17066 P11142 501 509 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2;3 0.00057987 158.87 By MS/MS By MS/MS 6.2 2.14 1 1 3 1 1 1 1 1 8 2 84375000 83927000 447720 6945 572;550;639 7176 17238;17239;17240;17241;17242;17243;17244;17245;17246;17247 13953;13954;13955;13956 13955 4 859560 272300 ITITNDQNR LRVTAEDKGTGNKNKITITNDQNRLTPEEI TGNKNKITITNDQNRLTPEEIERMVNDAEK K I T N R L 0 1 2 1 0 1 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1073.5465 P11021 P11021 524 532 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00055286 148.99 By MS/MS By MS/MS 5.33 0.471 2 1 1 2 515250 0 515250 6946 571 7177 17248;17249;17250 13957;13958 13957 2 0 437560 ITKPDGIVEER QPQPKSYFKSISVTKITKPDGIVEERRTVV SVTKITKPDGIVEERRTVVDSEGRTETTVT K I T E R R 0 1 0 1 0 0 2 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1255.6772 O00165 O00165 216 226 HAX1 HCLS1-associated protein X-1 yes yes 2;3 0.016418 108.35 By MS/MS 7.5 0.5 2 2 4 4765500 4765500 0 6947 86 7178 17251;17252;17253;17254 13959;13960;13961 13960 3 69586 0 ITKPGSIDSNNQLFAPGGR ISKGSRPIDTSRLTKITKPGSIDSNNQLFA GSIDSNNQLFAPGGRLSWGKGSSGGSGAKP K I T G R L 1 1 2 1 0 1 0 3 0 2 1 1 0 1 2 2 1 0 0 0 0 0 19 1 1971.0174 Q04637 Q04637 1072 1090 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00013196 207.08 By MS/MS 3.29 1.67 1 2 1 1 1 1 7 40690000 40690000 0 6948 1291 7179 17255;17256;17257;17258;17259;17260;17261 13962;13963;13964;13965;13966 13964 5 10553000 0 ITKPTIDEK GAKNSRVLDPSKFLKITKPTIDEKIQLVPK PSKFLKITKPTIDEKIQLVPKAQLGSWGKG K I T E K I 0 0 0 1 0 0 1 0 0 2 0 2 0 0 1 0 2 0 0 0 0 0 9 1 1043.5863 O43432 O43432 1055 1063 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 3 0.030183 76.943 By MS/MS 2 0 1 1 299640 299640 0 6949 210 7180 17262 13967 13967 1 101350 0 ITMIAEPLEK SSLKCFAETPNKKNKITMIAEPLEKGLAED NKKNKITMIAEPLEKGLAEDIENEVVQITW K I T E K G 1 0 0 0 0 0 2 0 0 2 1 1 1 0 1 0 1 0 0 0 0 0 10 0 1143.6209 Q15029 Q15029 685 694 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0050842 105.4 By MS/MS 3 0 1 1 500580 500580 0 6950 1476 7181 17263 13968 13968 1 9159.1 0 ITNDFYPEEDGK KLKNVIHKIFSKFGKITNDFYPEEDGKTKG FGKITNDFYPEEDGKTKGYIFLEYASPAHA K I T G K T 0 0 1 2 0 0 2 1 0 1 0 1 0 1 1 0 1 0 1 0 0 0 12 0 1426.6252 P55884 P55884 217 228 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 1.0146E-05 179.94 By MS/MS By MS/MS 4 1.76 1 1 1 3 1 1 1 8 1 20622000 20456000 166570 6951 1065 7182 17264;17265;17266;17267;17268;17269;17270;17271;17272 13969;13970;13971;13972;13973;13974 13974 6 1400700 354900 ITNDFYPEEDGKTK KLKNVIHKIFSKFGKITNDFYPEEDGKTKG KITNDFYPEEDGKTKGYIFLEYASPAHAVD K I T T K G 0 0 1 2 0 0 2 1 0 1 0 2 0 1 1 0 2 0 1 0 0 0 14 1 1655.7679 P55884 P55884 217 230 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 7.0754E-24 258.65 By MS/MS 5 1.22 1 2 2 2 1 8 48346000 48346000 0 6952 1065 7183 17273;17274;17275;17276;17277;17278;17279;17280 13975;13976;13977;13978;13979 13976 5 3558500 0 ITNHPSNK PVRQTASIFKQPVTKITNHPSNKVKSDPQK FKQPVTKITNHPSNKVKSDPQKAVDQPRQL K I T N K V 0 0 2 0 0 0 0 0 1 1 0 1 0 0 1 1 1 0 0 0 0 0 8 0 909.46683 O95983 O95983 115 122 MBD3 Methyl-CpG-binding domain protein 3 yes yes 2 0.011142 98.629 By MS/MS 7.5 0.5 1 1 2 203750 203750 0 6953 434 7184 17281;17282 13980 13980 1 2786.3 0 ITNLTQQLEQASIVK ELEGMRRSLKEQAIKITNLTQQLEQASIVK ITNLTQQLEQASIVKKRSEDDLRQQRDVLD K I T V K K 1 0 1 0 0 3 1 0 0 2 2 1 0 0 0 1 2 0 0 1 0 0 15 0 1684.9359 P15924 P15924 1612 1626 DSP Desmoplakin yes yes 2 1.3693E-52 298.91 By MS/MS By MS/MS 2.5 1.12 1 1 1 1 3 1 1169500 937030 232500 6954 628 7185 17283;17284;17285;17286 13981;13982;13983 13981 3 146350 29594 ITNQVHGLK LRDIKDTTVGTLSQRITNQVHGLKGLNSKL GTLSQRITNQVHGLKGLNSKLLDIRSYLEK R I T L K G 0 0 1 0 0 1 0 1 1 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1008.5716 P51665 P51665 191 199 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2;3 0.0020675 113.66 By MS/MS 7.33 0.471 2 1 3 6222400 6222400 0 6955 1005 7186 17287;17288;17289 13984;13985 13984 2 96744 0 ITNQVIYLNPPIEECR PGGEPKIKNVVHELRITNQVIYLNPPIEEC TNQVIYLNPPIEECRYKLYQEMFAWKMVVL R I T C R Y 0 1 2 0 1 1 2 0 0 3 1 0 0 0 2 0 1 0 1 1 0 0 16 0 1957.9931 Q14204 Q14204 964 979 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0003861 190.27 By MS/MS 1.5 0.5 1 1 2 513580 513580 0 6956 1433 7187 17290;17291 13986;13987 13986 2 142610 0 ITPAHDQNDYEVGQR FDEFVDMDFGTGAVKITPAHDQNDYEVGQR ITPAHDQNDYEVGQRHGLEAISIMDSRGAL K I T Q R H 1 1 1 2 0 2 1 1 1 1 0 0 0 0 1 0 1 0 1 1 0 0 15 0 1741.802 P26640 P26640 592 606 VARS Valine--tRNA ligase yes yes 3 0.0065581 95.822 By MS/MS 4 0.816 1 1 1 3 2288500 2288500 0 6957 735 7188 17292;17293;17294 13988;13989 13988 2 85129 0 ITPSYVAFTPEGER KNGRVEIIANDQGNRITPSYVAFTPEGERL RITPSYVAFTPEGERLIGDAAKNQLTSNPE R I T E R L 1 1 0 0 0 0 2 1 0 1 0 0 0 1 2 1 2 0 1 1 0 0 14 0 1565.7726 P11021 P11021 61 74 HSPA5 78 kDa glucose-regulated protein yes yes 2 3.4391E-07 208.56 By MS/MS By MS/MS 5.55 2.64 1 2 1 2 1 1 1 1 1 9 2 58862000 58457000 405280 6958 571 7189 17295;17296;17297;17298;17299;17300;17301;17302;17303;17304;17305 13990;13991;13992;13993;13994;13995;13996;13997;13998 13994 9 713740 308790 ITPSYVAFTPEGERLIGDAAK KNGRVEIIANDQGNRITPSYVAFTPEGERL AFTPEGERLIGDAAKNQLTSNPENTVFDAK R I T A K N 3 1 0 1 0 0 2 2 0 2 1 1 0 1 2 1 2 0 1 1 0 0 21 1 2234.1583 P11021 P11021 61 81 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.02291 63.691 By MS/MS 5.5 0.5 1 1 2 2501700 2501700 0 6959 571 7190 17306;17307 13999 13999 1 23010 0 ITQCSVEIQR DPAQLAQRISSNIQKITQCSVEIQRTLNQL SNIQKITQCSVEIQRTLNQLGTPQDSPELR K I T Q R T 0 1 0 0 1 2 1 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1232.6183 O15400 O15400 25 34 STX7 Syntaxin-7 yes yes 2 0.028873 80.916 By MS/MS 7 0 1 1 1146600 1146600 0 6960 189 7191 17308 14000 14000 0 17999 0 ITQDIFQQLLK SFDIFGRTTTPQQTKITQDIFQQLLKRGFV QQTKITQDIFQQLLKRGFVLQDTVEQLRCE K I T L K R 0 0 0 1 0 3 0 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1345.7606 P56192 P56192 365 375 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 1.0187E-06 190.57 By MS/MS 4.5 0.5 1 1 2 1092200 1092200 0 6961 1067 7192 17309;17310 14001;14002;14003;14004 14002 4 98096 0 ITQLCLAAIQR VVQPFLMGCGTKEPKITQLCLAAIQRLMSH KEPKITQLCLAAIQRLMSHEVVSETAAGNI K I T Q R L 2 1 0 0 1 2 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1285.7176 Q7Z3U7 Q7Z3U7 82 92 MON2 Protein MON2 homolog yes yes 2 8.5423E-20 270.06 By MS/MS 2 0 1 1 528700 528700 0 6962 1787 7193 17311 14005 14005 1 178830 0 ITQVDFPPR DSDLGRGPIKLGMAKITQVDFPPREIVTYT KLGMAKITQVDFPPREIVTYTKETQTPVMA K I T P R E 0 1 0 1 0 1 0 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 9 0 1071.5713 Q13409 Q13409 143 151 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 0.04811 93.178 By MS/MS 5 0 1 1 663180 663180 0 6963 1379 7194 17312 14006 14006 0 6651.3 0 ITREEGVLTLWR DQRRGYKNVFNALIRITREEGVLTLWRGCI LIRITREEGVLTLWRGCIPTMARAVVVNAA R I T W R G 0 2 0 0 0 0 2 1 0 1 2 0 0 0 0 0 2 1 0 1 0 0 12 1 1471.8147 Q02978 Q02978 171 182 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 0.0014267 144.7 By MS/MS 8 0 2 2 4646000 4646000 0 6964 1284 7195 17313;17314 14007;14008 14008 2 58655 0 ITSDEPLTKDDIPVFLR NNQERVTLLDLMIAKITSDEPLTKDDIPVF SDEPLTKDDIPVFLRHAELIASTFVDQCKT K I T L R H 0 1 0 3 0 0 1 0 0 2 2 1 0 1 2 1 2 0 0 1 0 0 17 1 1958.0361 Q9UBB4 Q9UBB4 254 270 ATXN10 Ataxin-10 yes yes 3 0.00014371 160.87 By MS/MS 6.5 0.5 1 1 2 2296600 2296600 0 6965 2693 7196 17315;17316 14009;14010 14010 2 23080 0 ITSEALLVTQQLVK LVPPVVACVGDPFYKITSEALLVTQQLVKV KITSEALLVTQQLVKVIRPLDQPSSFDATP K I T V K V 1 0 0 0 0 2 1 0 0 1 3 1 0 0 0 1 2 0 0 2 0 0 14 0 1541.9029 Q86VP6 Q86VP6 535 548 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2;3 0.00021317 216.91 By MS/MS 4 0.707 1 2 1 4 1679000 1679000 0 6966 1831 7197 17317;17318;17319;17320 14011;14012;14013;14014 14012 4 121440 0 ITSGPFEPDLYK QFKFTVLLMPNGPMRITSGPFEPDLYKSEM PMRITSGPFEPDLYKSEMEVQDAELKALLQ R I T Y K S 0 0 0 1 0 0 1 1 0 1 1 1 0 1 2 1 1 0 1 0 0 0 12 0 1365.6816 Q9UQ80 Q9UQ80 333 344 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0069695 97.813 By MS/MS 7 0 1 1 841810 841810 0 6967 2805 7198 17321 14015 14015 1 13215 0 ITSIVKDSSAAR KDSTGHVGFIFKNGKITSIVKDSSAARNGL NGKITSIVKDSSAARNGLLTEHNICEINGQ K I T A R N 2 1 0 1 0 0 0 0 0 2 0 1 0 0 0 3 1 0 0 1 0 0 12 1 1246.6881 O00560 O00560 218 229 SDCBP Syntenin-1 yes yes 2 0.042954 77.288 By MS/MS 8 0 1 1 323060 323060 0 6968 114 7199 17322 14016 14016 1 4078.6 0 ITTGAQDDLR MTLGGRVSEEIFFGRITTGAQDDLRKVTQS IFFGRITTGAQDDLRKVTQSAYAQIVQFGM R I T L R K 1 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1088.5462 Q9Y4W6 Q9Y4W6 642 651 AFG3L2 AFG3-like protein 2 yes yes 2 0.0011094 121.5 By MS/MS 5 0 1 1 1168000 1168000 0 6969 2902 7200 17323 14017 14017 1 11715 0 ITTGAQDDLRK MTLGGRVSEEIFFGRITTGAQDDLRKVTQS FFGRITTGAQDDLRKVTQSAYAQIVQFGMN R I T R K V 1 1 0 2 0 1 0 1 0 1 1 1 0 0 0 0 2 0 0 0 0 0 11 1 1216.6412 Q9Y4W6 Q9Y4W6 642 652 AFG3L2 AFG3-like protein 2 yes yes 2 0.02925 86.189 By MS/MS 5 0 1 1 973880 973880 0 6970 2902 7201 17324 14018 14018 1 9767.5 0 ITTGSSSAGTQSSTSNR GLQKSLLSSTSTTTKITTGSSSAGTQSSTS TGSSSAGTQSSTSNRLWAEDSTEKEKDSVP K I T N R L 1 1 1 0 0 1 0 2 0 1 0 0 0 0 0 6 4 0 0 0 0 0 17 0 1640.7602 O14974 O14974 596 612 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 2 2.0368E-08 225.33 By MS/MS 3 0 1 1 223680 223680 0 6971 151 7202 17325 14019 14019 1 4092.6 0 ITTIPVCYR LAELPLIRLDFSCNKITTIPVCYRNLRHLQ DFSCNKITTIPVCYRNLRHLQTITLDNNPL K I T Y R N 0 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 2 0 1 1 0 0 9 0 1121.5903 Q96II8 Q96II8 230 238 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 2 0.0093421 101.6 By MS/MS 4 0 1 1 666270 666270 0 6972 2174 7203 17326 14020 14020 1 62700 0 ITTMQLER RIKDMDLWEQQEEERITTMQLEREKALEHK EQQEEERITTMQLEREKALEHKNRMSRMLE R I T E R E 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 8 0 990.51682 Q14152 Q14152 733 740 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0021749 141.52 By MS/MS 2.8 0.748 2 2 1 5 8637200 8637200 0 6973 1422 7204;7205 17327;17328;17329;17330;17331 14021;14022;14023 14022 816 3 458150 0 ITVLEALR EARLGKPSLVRETSRITVLEALRHPIQVSR LVRETSRITVLEALRHPIQVSRRLLSRPQD R I T L R H 1 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 8 0 913.55967 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 291 298 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2 4.1783E-06 182.68 By MS/MS 5.25 1.48 1 1 1 1 4 18517000 18517000 0 6974 2598;1638 7206 17332;17333;17334;17335 14024;14025;14026;14027 14026 4 181840 0 ITVLEALRHPIQVSR EARLGKPSLVRETSRITVLEALRHPIQVSR ITVLEALRHPIQVSRRLLSRPQDVLEGVVL R I T S R R 1 2 0 0 0 1 1 0 1 2 2 0 0 0 1 1 1 0 0 2 0 0 15 1 1731.0155 Q9NVI7;Q5T9A4 Q5T9A4 291 305 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 3 0.039857 64.313 By MS/MS 5 0 1 1 547810 547810 0 6975 2598;1638 7207 17336 14028 14028 1 5494.3 0 ITVNEVELLVMK NHRQLTFEEIAKSAKITVNEVELLVMKALS SAKITVNEVELLVMKALSVGLVKGSIDEVD K I T M K A 0 0 1 0 0 0 2 0 0 1 2 1 1 0 0 0 1 0 0 3 0 0 12 0 1386.7792 Q9UNM6 Q9UNM6 302 313 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 7.0565E-09 218.07 By MS/MS 7 0 2 2 1208600 1208600 0 6976 2791 7208;7209 17337;17338 14029;14030 14029 1168 2 18973 0 ITVTSEVPFSK NLGGGVVTIERSKSKITVTSEVPFSKRYLK SKSKITVTSEVPFSKRYLKYLTKKYLKKNN K I T S K R 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 2 2 0 0 2 0 0 11 0 1206.6496 P35268 P35268 70 80 RPL22 60S ribosomal protein L22 yes yes 2 5.0682E-09 204.34 By MS/MS 10 0 1 1 1179000 1179000 0 6977 819 7210 17339 14031 14031 1 63545 0 IVAAHNK IRLALGGCTNRPFYRIVAAHNKCPRDGRFV CTNRPFYRIVAAHNKCPRDGRFVEQLGSYD R I V N K C 2 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 751.43407 Q9Y3D3 Q9Y3D3 34 40 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.01497 122.5 By MS/MS 10 0 1 1 2077600 2077600 0 6978 2871 7211 17340 14032 14032 1 111970 0 IVADKDYSVTANSK MMDLQHGSLFLQTPKIVADKDYSVTANSKI KIVADKDYSVTANSKIVVVTAGVRQQEGES K I V S K I 2 0 1 2 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1509.7675 P07195 P07195 78 91 LDHB L-lactate dehydrogenase B chain yes yes 2 8.5664E-16 255.24 By MS/MS 8.5 1.12 1 1 1 1 4 3478800 3478800 0 6979 506 7212 17341;17342;17343;17344 14033;14034 14034 2 56045 0 IVAERPGTNSTGPAPMAPPR WDLNAWTKSAEAFGKIVAERPGTNSTGPAP PGTNSTGPAPMAPPRAPGPLSKQGSGSSQP K I V P R A 3 2 1 0 0 0 1 2 0 1 0 0 1 0 5 1 2 0 0 1 0 0 20 1 2018.0367 Q13263 Q13263 408 427 TRIM28 Transcription intermediary factor 1-beta yes yes 3 7.4376E-06 176.17 By MS/MS 4.5 0.5 2 2 4 5333100 5333100 0 6980 1367 7213;7214 17345;17346;17347;17348 14035;14036;14037 14036 793 3 435660 0 IVAFENAFER LLLQALTRSNGAIQKIVAFENAFERLLDII GAIQKIVAFENAFERLLDIISEEGNSDGGI K I V E R L 2 1 1 0 0 0 2 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1194.6033 O60763 O60763 203 212 USO1 General vesicular transport factor p115 yes yes 2 2.6928E-05 163.38 By MS/MS 4 0 1 1 1888900 1888900 0 6981 276 7215 17349 14038 14038 1 177760 0 IVAISCAADILK QAVLKECSKENVKYKIVAISCAADILKATK KYKIVAISCAADILKATKEDRFQEFSNIVI K I V L K A 3 0 0 1 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 1 0 0 12 0 1272.7112 Q5VYK3 Q5VYK3 1633 1644 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 1.3636E-05 178.84 By MS/MS 2 0 1 1 745410 745410 0 6982 1656 7216 17350 14039 14039 1 252130 0 IVALSSSLSNAK SRMRYISSQIERPIRIVALSSSLSNAKDVA PIRIVALSSSLSNAKDVAHWLGCSATSTFN R I V A K D 2 0 1 0 0 0 0 0 0 1 2 1 0 0 0 4 0 0 0 1 0 0 12 0 1188.6714 O75643 O75643 1487 1498 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.9761E-06 197.21 By MS/MS 2 0.816 1 1 1 3 1917800 1917800 0 6983 340 7217 17351;17352;17353 14040;14041 14041 2 550190 0 IVANPEDTR KKEMLKIKQEQFMKKIVANPEDTRSLEARI EQFMKKIVANPEDTRSLEARIIALSVKIRS K I V T R S 1 1 1 1 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 9 0 1013.5142 P82914 P82914 115 123 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.048307 76.679 By MS/MS 8.5 0.5 1 1 2 4985800 4985800 0 6984 1235 7218 17354;17355 14042 14042 1 76560 0 IVAPGKGILAADESTGSIAK LTPEQKKELSDIAHRIVAPGKGILAADEST KGILAADESTGSIAKRLQSIGTENTEENRR R I V A K R 4 0 0 1 0 0 1 3 0 3 1 2 0 0 1 2 1 0 0 1 0 0 20 1 1897.052 P04075 P04075 23 42 ALDOA Fructose-bisphosphate aldolase A yes yes 2;3 0.0083806 162.26 By MS/MS 7 0 2 2 4919200 4919200 0 6985 467 7219 17356;17357 14043;14044 14044 2 77223 0 IVATKPLYVALAQR SPEEATKAVTEMNGRIVATKPLYVALAQRK RIVATKPLYVALAQRKEERQAHLTNQYMQR R I V Q R K 3 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 1 0 1 2 0 0 14 1 1541.9293 P11940;Q9H361 P11940 357 370 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.02229 105.36 By MS/MS 5 0 1 1 2212400 2212400 0 6986 586 7220 17358 14045 14045 1 22190 0 IVAVTGAEAQK FVIVTEEAIAKGIRRIVAVTGAEAQKALRK GIRRIVAVTGAEAQKALRKAESLKKCLSVM R I V Q K A 3 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1085.6081 P49588 P49588 752 762 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0012543 116.52 By MS/MS 4 0 1 1 2883400 2883400 0 6987 951 7221 17359 14046 14046 1 271350 0 IVCTPGQGLGDLR YCRIFTELCETFLEKIVCTPGQGLGDLRTL EKIVCTPGQGLGDLRTLELLLICAGHPQYE K I V L R T 0 1 0 1 1 1 0 3 0 1 2 0 0 0 1 0 1 0 0 1 0 0 13 0 1384.7133 Q9Y5L0 Q9Y5L0 310 322 TNPO3 Transportin-3 yes yes 2 0.020268 100.82 By MS/MS 4.5 0.5 1 1 2 5000700 5000700 0 6988 2915 7222 17360;17361 14047 14047 1 401860 0 IVCYEEK LSLDEDNMEFQVGDRIVCYEEKQIQAKTSW MEFQVGDRIVCYEEKQIQAKTSWDPGF___ R I V E K Q 0 0 0 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 7 0 939.43717 P46199 P46199 709 715 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 0.046281 92.467 By MS/MS By matching 5 0 2 1 1 1521700 1507300 14394 6989 910 7223 17362;17363 14048 14048 1 15118 12088 IVDGAVFAVLK RSSCDRHLLAASQNRIVDGAVFAVLKAVFV SQNRIVDGAVFAVLKAVFVLGDAELKGSGF R I V L K A 2 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 3 0 0 11 0 1130.6699 Q93074 Q93074 1215 1225 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 2 0.00052476 131.06 By MS/MS 2 0 1 1 72903 72903 0 6990 2088 7224 17364 14049 14049 1 24659 0 IVDNLGASGNSLYQR HRPKEAVLSCSQALKIVDNLGASGNSLYQR IVDNLGASGNSLYQRNLCLHLKAEALIKLS K I V Q R N 1 1 2 1 0 1 0 2 0 1 2 0 0 0 0 2 0 0 1 1 0 0 15 0 1605.8111 Q6PGP7 Q6PGP7 335 349 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 5.4355E-11 234.87 By MS/MS 3 0 1 1 486070 486070 0 6991 1716 7225 17365 14050 14050 1 8893.8 0 IVEAGCVCNDAVIR DGDVVHGFYNPAVSRIVEAGCVCNDAVIRN RIVEAGCVCNDAVIRNNTLMGKPTEGALIA R I V I R N 2 1 1 1 2 0 1 1 0 2 0 0 0 0 0 0 0 0 0 3 0 0 14 0 1574.7545 P98194 P98194 404 417 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 2 0.00040819 150.51 By MS/MS 1.5 0.5 1 1 2 331890 331890 0 6992 1254 7226 17366;17367 14051 14051 1 95246 0 IVEANPLLEAFGNAK YLTESYGTGQDIDDRIVEANPLLEAFGNAK IVEANPLLEAFGNAKTVRNNNSSRFGKFVE R I V A K T 3 0 2 0 0 0 2 1 0 1 2 1 0 1 1 0 0 0 0 1 0 0 15 0 1584.8512 Q9UM54 Q9UM54 182 196 MYO6 Unconventional myosin-VI yes yes 2 0.001037 122.66 By MS/MS 5 0.816 1 1 1 3 203940 203940 0 6993 2781 7227 17368;17369;17370 14052;14053 14053 2 6729.2 0 IVEDEPNKICEADR CASVTFKNYIKRNWRIVEDEPNKICEADRV RIVEDEPNKICEADRVAIKANIVHLMLSSP R I V D R V 1 1 1 2 1 0 3 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 14 1 1686.7883 P55060 P55060 76 89 CSE1L Exportin-2 yes yes 2 9.9074E-07 215.77 By MS/MS 4 0 1 1 622930 622930 0 6994 1053 7228 17371 14054 14054 1 58622 0 IVEDEPNKICEADRVAIK CASVTFKNYIKRNWRIVEDEPNKICEADRV DEPNKICEADRVAIKANIVHLMLSSPEQIQ R I V I K A 2 1 1 2 1 0 3 0 0 3 0 2 0 0 1 0 0 0 0 2 0 0 18 2 2098.0729 P55060 P55060 76 93 CSE1L Exportin-2 yes yes 3 0.046305 63.546 By MS/MS 4.5 0.5 1 1 2 11486000 11486000 0 6995 1053 7229 17372;17373 14055 14055 1 1030700 0 IVEIPFNSTNK LCCGSVKEMRERYAKIVEIPFNSTNKYQLS RYAKIVEIPFNSTNKYQLSIHKNPNTSEPQ K I V N K Y 0 0 2 0 0 0 1 0 0 2 0 1 0 1 1 1 1 0 0 1 0 0 11 0 1260.6714 P05023 P05023 477 487 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0071702 97.472 By MS/MS By MS/MS 3.17 1.34 1 1 1 2 1 5 1 13482000 13413000 68289 6996 481 7230 17374;17375;17376;17377;17378;17379 14056;14057;14058;14059;14060 14060 5 1696300 145500 IVEMEDVGLLFAR MWYAPVGIMFLVAGKIVEMEDVGLLFARLG GKIVEMEDVGLLFARLGKYILCCLLGHAIH K I V A R L 1 1 0 1 0 0 2 1 0 1 2 0 1 1 0 0 0 0 0 2 0 0 13 0 1490.7803 Q15758 Q15758 289 301 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.0005772 133.75 By MS/MS 5 0 1 1 40527 40527 0 6997 1530 7231 17380 14061;14062 14061 2 406.47 0 IVEPPENIQEK TNIDTLLVATDQTERIVEPPENIQEKIAFI QTERIVEPPENIQEKIAFIFNNLSQSNMTQ R I V E K I 0 0 1 0 0 1 3 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 11 0 1294.6769 A5YKK6 A5YKK6 1088 1098 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0039773 106.62 By MS/MS 2.5 0.5 1 1 2 1509300 1509300 0 6998 19 7232 17381;17382 14063;14064 14064 2 332360 0 IVEQDTMPPKGVR ADRMLDMGFEPQIRRIVEQDTMPPKGVRHT RRIVEQDTMPPKGVRHTMMFSATFPKEIQM R I V V R H 0 1 0 1 0 1 1 1 0 1 0 1 1 0 2 0 1 0 0 2 0 0 13 1 1468.7708 O00571;O15523 O00571 364 376 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.0055396 97.911 By MS/MS 5 0 1 1 1496400 1496400 0 6999 116 7233 17383 14065 14065 71 1 15008 0 IVEQPTVSVTEPK FKVNLDSEQAVKEEKIVEQPTVSVTEPKLA EKIVEQPTVSVTEPKLATPAGLKKSSKKAE K I V P K L 0 0 0 0 0 1 2 0 0 1 0 1 0 0 2 1 2 0 0 3 0 0 13 0 1425.7715 Q15054 Q15054 262 274 POLD3 DNA polymerase delta subunit 3 yes yes 2 0.038236 70.685 By MS/MS 5.5 0.5 1 1 2 891720 891720 0 7000 1484 7234 17384;17385 14066 14066 0 7969.7 0 IVETHQPIVETYYGPGR IFADTLTLLFEGIARIVETHQPIVETYYGP ETHQPIVETYYGPGRLYTLIKYLQVECDRQ R I V G R L 0 1 0 0 0 1 2 2 1 2 0 0 0 0 2 0 2 0 2 2 0 0 17 0 1957.9898 Q9H9E3 Q9H9E3 282 298 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 3 0.00045458 160.87 By MS/MS 4.5 0.5 1 1 2 1845000 1845000 0 7001 2486 7235 17386;17387 14067 14067 1 121720 0 IVEYEKEMEK DVKSCAEWVSLSKARIVEYEKEMEKMKNLI LSKARIVEYEKEMEKMKNLIPFDQMTIEDL R I V E K M 0 0 0 0 0 0 4 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 10 1 1296.6272 O75947 O75947 112 121 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 1.0576E-12 225.87 By MS/MS 9 0 1 1 2351100 2351100 0 7002 356 7236 17388 14068 14068 145 1 46271 0 IVFAAGNFWGR KWGYTVKGIQKYKAKIVFAAGNFWGRTLSA YKAKIVFAAGNFWGRTLSAISSSTDPTSYD K I V G R T 2 1 1 0 0 0 0 2 0 1 0 0 0 2 0 0 0 1 0 1 0 0 11 0 1236.6404 P04181 P04181 170 180 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.0040137 111.95 By MS/MS 7 0 1 1 73430 73430 0 7003 470 7237 17389 14069 14069 0 1152.7 0 IVFLLVGHK KDWLEEAKMYVQPFRIVFLLVGHKCDLASQ YVQPFRIVFLLVGHKCDLASQRQVTREEAE R I V H K C 0 0 0 0 0 0 0 1 1 1 2 1 0 1 0 0 0 0 0 2 0 0 9 0 1024.6433 Q14964 Q14964 120 128 RAB39A Ras-related protein Rab-39A yes yes 2 0.0060227 107.43 By MS/MS 9 0 1 1 90843 90843 0 7004 1461 7238 17390 14070 14070 1 1787.8 0 IVFQEFR VLEGIRICRQGFPNRIVFQEFRQRYEILTP CRQGFPNRIVFQEFRQRYEILTPNAIPKGF R I V F R Q 0 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 7 0 937.50215 P35580 P35580 719 725 MYH10 Myosin-10 no no 2 0.037102 99.375 By MS/MS By matching 2.33 0.471 2 1 2 1 1764100 1700900 63161 7005 825 7239 17391;17392;17393 14071 14071 1 482760 89321 IVFSPEEAK RGKGTFESGLKGGVKIVFSPEEAKAVSSQM LKGGVKIVFSPEEAKAVSSQMIGKKLFTKQ K I V A K A 1 0 0 0 0 0 2 0 0 1 0 1 0 1 1 1 0 0 0 1 0 0 9 0 1018.5335 Q9P2R7 Q9P2R7 121 129 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.034525 84.498 By MS/MS 7.5 0.5 1 1 2 5811000 5811000 0 7006 2690 7240 17394;17395 14072 14072 1 90573 0 IVFVPGCSIPLTIVK EFEDRGFVQVDDGRKIVFVPGCSIPLTIVK IVFVPGCSIPLTIVKSDGGYTYDTSDLAAI K I V V K S 0 0 0 0 1 0 0 1 0 3 1 1 0 1 2 1 1 0 0 3 0 0 15 0 1641.9528 P54136 P54136 363 377 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.006488 99.215 By MS/MS 5 0 1 1 270200 270200 0 7007 1043 7241 17396 14073 14073 1 2710 0 IVFVTGNAK ______________________________ SLVGKKIVFVTGNAKKLEEVVQILGDKFPC K I V A K K 1 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 2 0 0 9 0 947.54402 Q9BY32 Q9BY32 10 18 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.010744 99.139 By MS/MS 9 0 1 1 796760 796760 0 7008 2363 7242 17397 14074 14074 1 15680 0 IVFWLGDDLR CLPPALLPYLEQFRRIVFWLGDDLRSWEAA EQFRRIVFWLGDDLRSWEAAKLFARKLNPK R I V L R S 0 1 0 2 0 0 0 1 0 1 2 0 0 1 0 0 0 1 0 1 0 0 10 0 1232.6554 Q96RR1 Q96RR1 304 313 PEO1 Twinkle protein, mitochondrial yes yes 2 0.0092438 96.034 By MS/MS 5 0 1 1 38203 38203 0 7009 2225 7243 17398 14075;14076 14076 2 383.15 0 IVGHLTHALK GAVSLGHPIGMSGARIVGHLTHALKQGEYG MSGARIVGHLTHALKQGEYGLASICNGGGG R I V L K Q 1 0 0 0 0 0 0 1 2 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1087.6502 P24752 P24752 394 403 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0081116 98.582 By MS/MS 7 0 1 1 4574600 4574600 0 7010 716 7244 17399 14077 14077 1 71813 0 IVGLSTALANAR SRTNFISSHTEKPVRIVGLSTALANARDLA PVRIVGLSTALANARDLADWLNIKQMGLFN R I V A R D 3 1 1 0 0 0 0 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 12 0 1184.6877 Q8N3C0 Q8N3C0 1486 1497 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 1.4265E-08 210.64 By MS/MS 1.5 0.5 1 1 2 526760 526760 0 7011 1911 7245 17400;17401 14078;14079 14079 2 157080 0 IVGPSGAAVPCK VKSKGAGGQGKVASKIVGPSGAAVPCKVEP ASKIVGPSGAAVPCKVEPGLGADNSVVRFL K I V C K V 2 0 0 0 1 0 0 2 0 1 0 1 0 0 2 1 0 0 0 2 0 0 12 0 1154.6118 P21333 P21333 1008 1019 FLNA Filamin-A yes yes 2 0.0037533 107.21 By MS/MS 1.5 0.5 1 1 2 588230 588230 0 7012 677 7246 17402;17403 14080 14080 1 184210 0 IVGPSGAAVPCKVEPGLGADNSVVR VKSKGAGGQGKVASKIVGPSGAAVPCKVEP CKVEPGLGADNSVVRFLPREEGPYEVEVTY K I V V R F 3 1 1 1 1 0 1 4 0 1 1 1 0 0 3 2 0 0 0 5 0 0 25 1 2448.2795 P21333 P21333 1008 1032 FLNA Filamin-A yes yes 3 0.00075839 85.884 By MS/MS 1.5 0.5 1 1 2 1626700 1626700 0 7013 677 7247 17404;17405 14081;14082;14083 14083 3 512700 0 IVGSKPLYVALAQR SPEEATKAVTEMNGRIVGSKPLYVALAQRK RIVGSKPLYVALAQRKEERKAHLTNQYMQR R I V Q R K 2 1 0 0 0 1 0 1 0 1 2 1 0 0 1 1 0 0 1 2 0 0 14 1 1513.898 Q13310 Q13310 357 370 PABPC4 Polyadenylate-binding protein 4 yes yes 3 0.00094802 116.24 By MS/MS 5 0 1 1 812940 812940 0 7014 1369 7248 17406 14084 14084 1 8153.4 0 IVHAFDMEDLGDK NKAMINLHIQKDNPKIVHAFDMEDLGDKAV PKIVHAFDMEDLGDKAVYCRCWRSKKFPFC K I V D K A 1 0 0 3 0 0 1 1 1 1 1 1 1 1 0 0 0 0 0 1 0 0 13 0 1488.6919 Q9NZ45 Q9NZ45 56 68 CISD1 CDGSH iron-sulfur domain-containing protein 1 yes yes 3 0.0044138 100.38 By MS/MS 10 0 1 1 184790 184790 0 7015 2645 7249 17407 14085 14085 1127 1 9959.4 0 IVHDLISR MDGEKDPRNLLVAFRIVHDLISRDYSLGPF NLLVAFRIVHDLISRDYSLGPFVEELFEVT R I V S R D 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 1 0 0 0 1 0 0 8 0 951.55016 Q96T76 Q96T76 196 203 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2;3 0.043249 93.143 By MS/MS 4 0 2 2 1290500 1290500 0 7016 2240 7250 17408;17409 14086;14087 14087 2 121440 0 IVHKGDECILK PIILRALCDYKQDQKIVHKGDECILKDNNE QDQKIVHKGDECILKDNNERSKWYVTGPGG K I V L K D 0 0 0 1 1 0 1 1 1 2 1 2 0 0 0 0 0 0 0 1 0 0 11 1 1310.7017 P15924 P15924 475 485 DSP Desmoplakin yes yes 3 0.005184 95.483 By MS/MS 2.5 0.5 1 1 2 565870 565870 0 7017 628 7251 17410;17411 14088 14088 1 170310 0 IVHKGDECILKDNNER PIILRALCDYKQDQKIVHKGDECILKDNNE VHKGDECILKDNNERSKWYVTGPGGVDMLV K I V E R S 0 1 2 2 1 0 2 1 1 2 1 2 0 0 0 0 0 0 0 1 0 0 16 2 1938.9582 P15924 P15924 475 490 DSP Desmoplakin yes yes 3;4 0.0053583 97.767 By MS/MS By matching 1.86 0.833 3 2 2 6 1 1735500 1700200 35276 7018 628 7252 17412;17413;17414;17415;17416;17417;17418 14089;14090 14090 2 398620 35276 IVHSSMTR LTGLRLASLGLKFNKIVHSSMTRAIETTDI LGLKFNKIVHSSMTRAIETTDIISRHLPGV K I V T R A 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 2 1 0 0 1 0 0 8 0 929.47529 Q96HS1 Q96HS1 145 152 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 0.008497 123.98 By MS/MS 8.5 0.5 3 3 6 3686300 3686300 0 7019 2168 7253;7254 17419;17420;17421;17422;17423;17424 14091;14092;14093;14094 14094 1024 4 52279 0 IVIGYQSHADTATK HIGRVYKERLGLPPKIVIGYQSHADTATKS KIVIGYQSHADTATKSGSTTKNRFVV____ K I V T K S 2 0 0 1 0 1 0 1 1 2 0 1 0 0 0 1 2 0 1 1 0 0 14 0 1502.7729 P06730 P06730 193 206 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 1.7682E-16 251.75 By MS/MS 8.5 0.5 1 1 2 2436600 2436600 0 7020 499 7255 17425;17426 14095;14096 14095 2 33005 0 IVILEYQPSK GGTKDYIVVGSDSGRIVILEYQPSKNMFEK SDSGRIVILEYQPSKNMFEKIHQETFGKSG R I V S K N 0 0 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 10 0 1188.6754 Q15393 Q15393 87 96 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0008606 126.31 By MS/MS 2 0.816 1 1 1 3 517860 517860 0 7021 1508 7256 17427;17428;17429 14097 14097 1 93415 0 IVKPVKVSAPR MAAAKAPTKAAPKQKIVKPVKVSAPRVGGK PKQKIVKPVKVSAPRVGGKR__________ K I V P R V 1 1 0 0 0 0 0 0 0 1 0 2 0 0 2 1 0 0 0 3 0 0 11 2 1192.7656 P83731 P83731 142 152 RPL24 60S ribosomal protein L24 yes yes 3 0.023282 83.869 By MS/MS 9 0 1 1 93540 93540 0 7022 1241 7257 17430 14098 14098 0 1840.9 0 IVLAGCVPQAQPR HFRNSIKKAQEENKKIVLAGCVPQAQPRQD KKIVLAGCVPQAQPRQDYLKGLSIIGVQQI K I V P R Q 2 1 0 0 1 2 0 1 0 1 1 0 0 0 2 0 0 0 0 2 0 0 13 0 1407.7657 Q5VV42 Q5VV42 133 145 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 0.00026112 156.35 By MS/MS 5.5 0.5 1 1 2 8065400 8065400 0 7023 1652 7258 17431;17432 14099;14100 14100 2 60079 0 IVLEDGTLHVTEGSGR MECRGSPLVVISQGKIVLEDGTLHVTEGSG VLEDGTLHVTEGSGRYIPRKPFPDFVYKRI K I V G R Y 0 1 0 1 0 0 2 3 1 1 2 0 0 0 0 1 2 0 0 2 0 0 16 0 1681.8635 Q16555 Q16555 452 467 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 3 0.009911 88.706 By MS/MS 5 0 1 1 799640 799640 0 7024 1552 7259 17433 14101 14101 1 8019.9 0 IVLGGTTVHNTK ALTVYNLNRTTPGVRIVLGGTTVHNTKSFL GVRIVLGGTTVHNTKSFLEEVLASGLHSRS R I V T K S 0 0 1 0 0 0 0 2 1 1 1 1 0 0 0 0 3 0 0 2 0 0 12 0 1238.6983 Q9NRW7 Q9NRW7 530 541 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.00073987 130.01 By MS/MS 5 0 1 1 253660 253660 0 7025 2559 7260 17434 14102 14102 1 2544.1 0 IVLLDSSLEYK DVTHPRMRRYIKNPRIVLLDSSLEYKKGES KNPRIVLLDSSLEYKKGESQTDIEITREED R I V Y K K 0 0 0 1 0 0 1 0 0 1 3 1 0 0 0 2 0 0 1 1 0 0 11 0 1278.7071 P49368 P49368 238 248 CCT3 T-complex protein 1 subunit gamma yes yes 2 1.1557E-05 187.22 By MS/MS By MS/MS 6 1.13 1 3 3 3 1 9 2 108390000 108180000 211970 7026 947 7261 17435;17436;17437;17438;17439;17440;17441;17442;17443;17444;17445 14103;14104;14105;14106;14107;14108;14109;14110;14111;14112 14104 10 940680 208180 IVLLDSSLEYKK DVTHPRMRRYIKNPRIVLLDSSLEYKKGES NPRIVLLDSSLEYKKGESQTDIEITREEDF R I V K K G 0 0 0 1 0 0 1 0 0 1 3 2 0 0 0 2 0 0 1 1 0 0 12 1 1406.8021 P49368 P49368 238 249 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0014787 111.86 By MS/MS 6 0.816 2 2 2 6 8091400 8091400 0 7027 947 7262 17446;17447;17448;17449;17450;17451 14113;14114;14115 14115 3 70588 0 IVLLSANSIR LHHPRATFLGLTNEKIVLLSANSIRATVAT LTNEKIVLLSANSIRATVATENNKVATWVD K I V I R A 1 1 1 0 0 0 0 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1084.6604 O95071 O95071 424 433 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 9.8809E-05 154.01 By MS/MS 4 0.816 1 1 1 3 1753500 1753500 0 7028 384 7263 17452;17453;17454 14116;14117 14117 2 109550 0 IVLTNPVCTEVGEK STGGRVSAVKADLGKIVLTNPVCTEVGEKI KIVLTNPVCTEVGEKIALSRRVEKHWRLIG K I V E K I 0 0 1 0 1 0 2 1 0 1 1 1 0 0 1 0 2 0 0 3 0 0 14 0 1557.8072 P41091;Q2VIR3 P41091 427 440 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 1.2755E-07 219.43 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 48607000 48523000 83807 7029 866 7264 17455;17456;17457;17458;17459;17460 14118;14119;14120;14121;14122;14123;14124 14123 7 448270 85878 IVNLACK PDIVLWPTCHDDVVKIVNLACKYNLCIIPI TCHDDVVKIVNLACKYNLCIIPIGGGTSVS K I V C K Y 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 816.45276 O00116 O00116 221 227 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.0054759 153.61 By MS/MS 5 0 1 1 1063600 1063600 0 7030 80 7265 17461 14125 14125 1 10668 0 IVNQPSSLFGSK NTVNAALKPLETLSRIVNQPSSLFGSKSAS LSRIVNQPSSLFGSKSASSKNKSEQDAQGA R I V S K S 0 0 1 0 0 1 0 1 0 1 1 1 0 1 1 3 0 0 0 1 0 0 12 0 1275.6823 Q7Z6Z7 Q7Z6Z7 2256 2267 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0044627 105.13 By MS/MS 1.5 0.5 1 1 2 850030 850030 0 7031 1802 7266 17462;17463 14126;14127 14126 2 239830 0 IVNSAQTGSFK PTPAEIPRAIQSLKKIVNSAQTGSFKQLTV SLKKIVNSAQTGSFKQLTVKEAVLNGLVAT K I V F K Q 1 0 1 0 0 1 0 1 0 1 0 1 0 1 0 2 1 0 0 1 0 0 11 0 1150.5982 O75964 O75964 56 66 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 5.5379E-07 196.44 By MS/MS 10 0 1 1 8512200 8512200 0 7032 357 7267 17464 14128 14128 1 458780 0 IVNSFLCLVPDDAK TPDHPKNDGKTEVHKIVNSFLCLVPDDAKS KIVNSFLCLVPDDAKSSYHVEGTGYDTYLR K I V A K S 1 0 1 2 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 2 0 0 14 0 1589.8123 Q5W0V3 Q5W0V3 568 581 FAM160B1 Protein FAM160B1 yes yes 2 0.00090307 126.95 By MS/MS 4 0 1 1 159770 159770 0 7033 1661 7268 17465 14129;14130 14130 2 15035 0 IVNVSSLAHHLGR THLLLEKLKESAPSRIVNVSSLAHHLGRIH SRIVNVSSLAHHLGRIHFHNLQGEKFYNAG R I V G R I 1 1 1 0 0 0 0 1 2 1 2 0 0 0 0 2 0 0 0 2 0 0 13 0 1401.7841 Q8TC12 Q8TC12 172 184 RDH11 Retinol dehydrogenase 11 yes yes 3 0.027039 78.342 By MS/MS 8 0 1 1 645190 645190 0 7034 1988 7269 17466 14131 14131 1 8145.4 0 IVPGQFLAVDPK EKIHQETFGKSGCRRIVPGQFLAVDPKGRA CRRIVPGQFLAVDPKGRAVMISAIEKQKLV R I V P K G 1 0 0 1 0 1 0 1 0 1 1 1 0 1 2 0 0 0 0 2 0 0 12 0 1282.7285 Q15393 Q15393 115 126 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.014562 88.134 By MS/MS 2.5 1.12 1 1 1 1 4 1236300 1236300 0 7035 1508 7270 17467;17468;17469;17470 14132;14133 14133 2 224380 0 IVPNVLLEQGK LPNDPMFKLVAQLYKIVPNVLLEQGKAKNP QLYKIVPNVLLEQGKAKNPWPNVDAHSGVL K I V G K A 0 0 1 0 0 1 1 1 0 1 2 1 0 0 1 0 0 0 0 2 0 0 11 0 1208.7129 O75390 O75390 383 393 CS Citrate synthase, mitochondrial yes yes 2 0.001625 112.83 By MS/MS 7 0 1 1 6835900 6835900 0 7036 321 7271 17471 14134 14134 1 107310 0 IVQAEGEAEAAK AQFLVEKAKQEQRQKIVQAEGEAEAAKMLG RQKIVQAEGEAEAAKMLGEALSKNPGYIKL K I V A K M 4 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 12 0 1214.6143 Q99623 Q99623 225 236 PHB2 Prohibitin-2 yes yes 2 5.3805E-06 184.44 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 94039000 92203000 1836000 7037 2254 7272 17472;17473;17474;17475;17476;17477 14135;14136;14137;14138;14139;14140;14141 14137 7 1366200 2834400 IVQEDRAVESR KDSAIQQQVANLQMKIVQEDRAVESRTTDL LQMKIVQEDRAVESRTTDLLTDWEKTKPVT K I V S R T 1 2 0 1 0 1 2 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 11 1 1300.6735 Q14204 Q14204 1243 1253 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00089564 144.77 By MS/MS 1.5 0.5 1 1 2 442300 442300 0 7038 1433 7273 17478;17479 14142 14142 1 121860 0 IVQLLAGVADQTK QRYLGLYNDPNSNPKIVQLLAGVADQTKDG PKIVQLLAGVADQTKDGLISYQEFLAFESV K I V T K D 2 0 0 1 0 2 0 1 0 1 2 1 0 0 0 0 1 0 0 2 0 0 13 0 1354.782 O75746 O75746 56 68 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.00017643 165.35 By MS/MS 5 0 1 1 3930600 3930600 0 7039 344 7274 17480 14143 14143 1 39422 0 IVQTLCTVR GLDSSPFLSEANAERIVQTLCTVRGAALKV EANAERIVQTLCTVRGAALKVGQMLSIQDN R I V V R G 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 2 0 0 2 0 0 9 0 1088.6012 Q96D53 Q96D53 142 150 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.0019536 121.73 By MS/MS 6 0 1 1 1867600 1867600 0 7040 2132 7275 17481 14144 14144 1 12838 0 IVRGDQPAASGDSDDDEPPPLPR LNLLLLGLCIFLLYKIVRGDQPAASGDSDD ASGDSDDDEPPPLPRLKRRDFTPAELRRFD K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 9.3939E-15 238.69 By MS/MS 8.5 0.5 1 1 2 5465100 5465100 0 7041 96 7276 17482;17483 14145;14146;14147 14146 3 81312 0 IVSAQSLAEDDVE VFQMLLTKLPTISQRIVSAQSLAEDDVE__ QRIVSAQSLAEDDVE_______________ R I V V E - 2 0 0 2 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 13 0 1374.6515 Q15388 Q15388 133 145 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 6.0189E-06 199.19 By MS/MS By MS/MS 10 0 3 2 1 16373000 16195000 178000 7042 1506 7277 17484;17485;17486 14148;14149;14150 14150 3 872840 227890 IVSGKDYNVTANSK MMDLQHGSLFLRTPKIVSGKDYNVTANSKL KIVSGKDYNVTANSKLVIITAGARQQEGES K I V S K L 1 0 2 1 0 0 0 1 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1494.7678 P00338 P00338 77 90 LDHA L-lactate dehydrogenase A chain yes yes 2 6.5431E-05 187.62 By MS/MS 7.5 0.5 1 1 2 906350 906350 0 7043 440 7278 17487;17488 14151 14151 1 12281 0 IVSQLLTLMDGLK IAPKREKTHGEVERRIVSQLLTLMDGLKQR RRIVSQLLTLMDGLKQRAHVIVMAATNRPN R I V L K Q 0 0 0 1 0 1 0 1 0 1 4 1 1 0 0 1 1 0 0 1 0 0 13 0 1429.8214 P55072 P55072 324 336 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0013381 119.21 By MS/MS 4 0 1 1 132350 132350 0 7044 1054 7279 17489 14152 14152 589 1 12455 0 IVSRPEELREDDVGTGAGLLEIK RKTDNNRIARACGARIVSRPEELREDDVGT REDDVGTGAGLLEIKKIGDEYFTFITDCKD R I V I K K 1 2 0 2 0 0 4 3 0 2 3 1 0 0 1 1 1 0 0 2 0 0 23 2 2495.3231 P49368 P49368 331 353 CCT3 T-complex protein 1 subunit gamma yes yes 3;4 1.8633E-07 175.56 By MS/MS 6 0.816 2 2 2 6 147520000 147520000 0 7045 947 7280 17490;17491;17492;17493;17494;17495 14153;14154;14155;14156;14157;14158 14153 6 1085500 0 IVSSQLYLQR I V Q R 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 2 0 0 1 1 0 0 10 0 1205.6768 REV__Q9NZJ5 yes yes 3 0.0047131 104.42 By MS/MS 3 0 1 1 1200400 1200400 0 + 7046 2990 7281 17496 14159 14159 1 21965 0 IVSTSLDCLQK YFLPFELACQSKCPRIVSTSLDCLQKLIAY KCPRIVSTSLDCLQKLIAYGHLTGNAPDST R I V Q K L 0 0 0 1 1 1 0 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 11 0 1262.654 Q9Y6D6 Q9Y6D6 95 105 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 5.7943E-07 215.93 By MS/MS 2 0 1 1 697300 697300 0 7047 2941 7282 17497 14160 14160 1 235860 0 IVTDRETGSSK EETLKESFDGSVRARIVTDRETGSSKGFGF VRARIVTDRETGSSKGFGFVDFNSEEDAKA R I V S K G 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 11 1 1191.6095 P19338 P19338 600 610 NCL Nucleolin yes yes 2 5.6557E-06 188.99 By MS/MS 5 0.816 1 1 1 3 2163600 2163600 0 7048 659 7283 17498;17499;17500 14161;14162;14163 14161 3 155360 0 IVTGLSESSVK DIRKKIIETENMMDRIVTGLSESSVKVRLA MMDRIVTGLSESSVKVRLAAVRCLHSLSRS R I V V K V 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 3 1 0 0 2 0 0 11 0 1118.6183 Q8IUR7 Q8IUR7 389 399 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.00088583 123.86 By MS/MS 5 0 1 1 1171300 1171300 0 7049 1860 7284 17501 14164 14164 1 11747 0 IVTTPQTVLR IIMRFRKRKNFKKKRIVTTPQTVLRINSIE FKKKRIVTTPQTVLRINSIEIAPCLL____ R I V L R I 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 3 0 0 2 0 0 10 0 1126.671 Q7Z2W9 Q7Z2W9 185 194 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 1.8254E-06 179.81 By MS/MS By matching 9.33 0.471 2 1 2 1 8063200 7984600 78548 7050 1779 7285 17502;17503;17504 14165 14165 1 190420 179110 IVTVVPQDTK VSHGEVLRKVERGSRIVTVVPQDTKLVLQM ERGSRIVTVVPQDTKLVLQMPRGNLEVVHH R I V T K L 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 2 0 0 3 0 0 10 0 1098.6285 O95163 O95163 697 706 IKBKAP Elongator complex protein 1 yes yes 2 0.0067503 101.65 By MS/MS 2.67 1.25 1 1 1 3 1427200 1427200 0 7051 388 7286 17505;17506;17507 14166;14167 14167 2 126910 0 IVVAAVAR CNIVRTEYYKELAARIVVAAVARAAARCNK YKELAARIVVAAVARAAARCNKGIEVLFAV R I V A R A 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 797.51232 Q7Z2T5 Q7Z2T5 434 441 TRMT1L TRMT1-like protein yes yes 2 0.0031388 134.12 By MS/MS 4.5 0.5 1 1 2 1027400 1027400 0 7052 1777 7287 17508;17509 14168 14168 1 87170 0 IVVEFSSPNVAK YGLKSELFSGLPQKKIVVEFSSPNVAKKFH QKKIVVEFSSPNVAKKFHVGHLRSTIIGNF K I V A K K 1 0 1 0 0 0 1 0 0 1 0 1 0 1 1 2 0 0 0 3 0 0 12 0 1288.7027 Q5T160 Q5T160 127 138 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.0012941 119.34 By MS/MS 6 0 1 1 1598500 1598500 0 7053 1627 7288 17510 14169;14170 14169 2 10989 0 IVVFQYSDGK TAMVYPEEAEPKQGRIVVFQYSDGKLQTVA PKQGRIVVFQYSDGKLQTVAEKEVKGAVYS R I V G K L 0 0 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 0 1 2 0 0 10 0 1154.5972 Q16531 Q16531 848 857 DDB1 DNA damage-binding protein 1 yes yes 2 0.0072699 100.48 By MS/MS 2 0.816 1 1 1 3 505880 505880 0 7054 1549 7289 17511;17512;17513 14171 14171 1 110090 0 IVVLFYK EYCYDNIHFMKAFQKIVVLFYKAEVLSEEP HFMKAFQKIVVLFYKAEVLSEEPILKWYKD K I V Y K A 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 1 2 0 0 7 0 880.54223 Q9Y6E2;Q7L1Q6 Q7L1Q6 362 368 BZW2;BZW1 Basic leucine zipper and W2 domain-containing protein 2;Basic leucine zipper and W2 domain-containing protein 1 no no 2 0.039407 97.64 By MS/MS 7 0 1 1 1464700 1464700 0 7055 1760;2942 7290 17514 14172 14172 1 22993 0 IVVNLTGR YIGEFEIIDDHRAGKIVVNLTGRLNKCGVI DDHRAGKIVVNLTGRLNKCGVISPRFDVQL K I V G R L 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 2 0 0 8 0 870.5287 P62244 P62244 61 68 RPS15A 40S ribosomal protein S15a yes yes 2 0.006314 119.41 By MS/MS 10 0 1 1 27738000 27738000 0 7056 1144 7291 17515 14173 14173 1 1495000 0 IVVSNTPR DTQLVVRQASLHVWKIVVSNTPRTLREILP ASLHVWKIVVSNTPRTLREILPTLFGLLLG K I V P R T 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 2 0 0 8 0 884.50797 Q92616 Q92616 1910 1917 GCN1L1 Translational activator GCN1 yes yes 2 0.0073734 114.5 By MS/MS 2 0 1 1 3337800 3337800 0 7057 2064 7292 17516 14174 14174 1 1129000 0 IVVVTAGVR KIVADKDYSVTANSKIVVVTAGVRQQEGES VTANSKIVVVTAGVRQQEGESRLNLVQRNV K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 P07195 P07195 92 100 LDHB L-lactate dehydrogenase B chain yes yes 2 0.00071934 139.97 By MS/MS 7.5 0.5 1 1 2 3927200 3927200 0 7058 506 7293 17517;17518 14175 14175 1 57655 0 IVYPPQLPGEPR SASLDISRKWEKKNKIVYPPQLPGEPRRPA KNKIVYPPQLPGEPRRPAEIYHCRRQIKYS K I V P R R 0 1 0 0 0 1 1 1 0 1 1 0 0 0 4 0 0 0 1 1 0 0 12 0 1364.7452 Q9NWU5 Q9NWU5 51 62 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.024229 83 By MS/MS 9 0 1 1 2429600 2429600 0 7059 2614 7294 17519 14176;14177;14178 14176 3 47815 0 IWDLEGK PNRYWLCAATGPSIKIWDLEGKIIVDELKQ AATGPSIKIWDLEGKIIVDELKQEVISTSS K I W G K I 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 7 0 859.44397 P63244 P63244 258 264 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.043896 94.262 By MS/MS 9 0.816 1 1 1 3 24702000 24702000 0 7060 1202 7295 17520;17521;17522 14179 14179 1 329820 0 IWQYVYSK PMEHGIVKDWNDMERIWQYVYSKDQLQTFS DWNDMERIWQYVYSKDQLQTFSEEHPVLLT R I W S K D 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 1 2 1 0 0 8 0 1085.5546 P61163 P61163 89 96 ACTR1A Alpha-centractin no no 2 0.00774 113.26 By MS/MS 7 0 1 1 2391500 2391500 0 7061 1113 7296 17523 14180 14180 1 37543 0 IWYLLDGK SSFSRAPQQWATFARIWYLLDGKMQPPGKL QWATFARIWYLLDGKMQPPGKLAAMASIRL R I W G K M 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 1 1 0 0 0 8 0 1006.5488 Q9BYD1 Q9BYD1 17 24 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0040963 129.68 By MS/MS 9 0 1 1 239070 239070 0 7062 2368 7297 17524 14181 14181 1 4704.9 0 IYAPQGLLLTDPIER VLKKVSKYIQEQNEKIYAPQGLLLTDPIER IYAPQGLLLTDPIERGLRVIEITIYEDRGM K I Y E R G 1 1 0 1 0 1 1 1 0 2 3 0 0 0 2 0 1 0 1 0 0 0 15 0 1697.9352 Q7Z5G4 Q7Z5G4 104 118 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.00038282 202.05 By MS/MS 10 0 1 1 98863 98863 0 7063 1797 7298 17525 14182;14183 14182 2 5328.4 0 IYDALDNR SQSSIKSSICLLRGKIYDALDNRTLATYSY ICLLRGKIYDALDNRTLATYSYKEALKLDV K I Y N R T 1 1 1 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 978.47706 Q13042 Q13042 139 146 CDC16 Cell division cycle protein 16 homolog yes yes 2 0.050519 82.279 By MS/MS 5 0 1 1 963740 963740 0 7064 1347 7299 17526 14184 14184 1 9665.8 0 IYDALDVSLIER AWKLICDVSRQELNKIYDALDVSLIERGES LNKIYDALDVSLIERGESFYQDRMNDIVKE K I Y E R G 1 1 0 2 0 0 1 0 0 2 2 0 0 0 0 1 0 0 1 1 0 0 12 0 1405.7453 P54136 P54136 322 333 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 6.133E-05 163.9 By MS/MS 5 0 1 1 354010 354010 0 7065 1043 7300 17527 14185 14185 1 3550.5 0 IYDLNKPEAEPK DSNYLLTGGQDKLLRIYDLNKPEAEPKEIS LLRIYDLNKPEAEPKEISGHTSGIKKALWC R I Y P K E 1 0 1 1 0 0 2 0 0 1 1 2 0 0 2 0 0 0 1 0 0 0 12 1 1415.7296 Q9Y3F4 Q9Y3F4 126 137 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 3.6628E-06 201.09 By MS/MS By matching 7.25 0.433 3 1 3 1 12537000 12487000 50396 7066 2877 7301 17528;17529;17530;17531 14186;14187 14186 2 194660 90763 IYEAQPEISR RAKSTWLNNIKLLNKIYEAQPEISRAFQTR KLLNKIYEAQPEISRAFQTREFIPLPRLLA K I Y S R A 1 1 0 0 0 1 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 10 0 1204.6088 O60287 O60287 400 409 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 2 0.0067422 101.66 By MS/MS 2 0 1 1 157990 157990 0 7067 252 7302 17532 14188 14188 1 53438 0 IYEFTLQR RREYRKFFRANAGKKIYEFTLQRIVQKYFL RANAGKKIYEFTLQRIVQKYFLEMKNKMPS K I Y Q R I 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 8 0 1068.5604 O43795 O43795 869 876 MYO1B Unconventional myosin-Ib yes yes 2 0.00025147 167.9 By MS/MS 3 0 1 1 293380 293380 0 7068 235 7303 17533 14189 14189 1 5368 0 IYFDRDLHTNSPR FSLTAVGATNVGSIRIYFDRDLHTNSPRHS IRIYFDRDLHTNSPRHSKGSYNDFSFVTHT R I Y P R H 0 2 1 2 0 0 0 0 1 1 1 0 0 1 1 1 1 0 1 0 0 0 13 1 1632.8009 Q9UG56 Q9UG56 331 343 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 3 0.029324 70.089 By MS/MS 7.5 0.5 1 1 2 2924700 2924700 0 7069 2718 7304 17534;17535 14190 14190 1 41372 0 IYFLLVR YNKSKYHLKDVIVGKIYFLLVRIKIQHMEL LKDVIVGKIYFLLVRIKIQHMELQLIKKEI K I Y V R I 0 1 0 0 0 0 0 0 0 1 2 0 0 1 0 0 0 0 1 1 0 0 7 0 922.56402 O75436 O75436 195 201 VPS26A Vacuolar protein sorting-associated protein 26A no no 2 0.039407 97.64 By MS/MS 7 0 1 1 255550 255550 0 7070 328 7305 17536 14191 14191 1 4011.7 0 IYGADDIELLPEAQHK LKLPVEDKIRIIAQKIYGADDIELLPEAQH YGADDIELLPEAQHKAEVYTKQGFGNLPIC K I Y H K A 2 0 0 2 0 1 2 1 1 2 2 1 0 0 1 0 0 0 1 0 0 0 16 0 1810.9101 P11586 P11586 833 848 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.00046357 161.21 By MS/MS 4.33 0.471 2 1 3 6118800 6118800 0 7071 582 7306 17537;17538;17539 14192;14193;14194 14192 3 548920 0 IYGDGNAVPR QALHLQFGKQYPCSKIYGDGNAVPRILKFL YPCSKIYGDGNAVPRILKFLKSIDLQEPLQ K I Y P R I 1 1 1 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 1 1 0 0 10 0 1060.5302 Q9Y223 Q9Y223 360 369 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.00086424 126.24 By MS/MS 5.5 0.5 1 1 2 1537400 1537400 0 7072 2808 7307 17540;17541 14195 14195 1 14832 0 IYGETPEACR GVTAIELGEETCTFRIYGETPEACRQARSY TCTFRIYGETPEACRQARSYLEFSEDSVQV R I Y C R Q 1 1 0 0 1 0 2 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1194.5339 P51116 P51116 274 283 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 0.00020511 146.79 By MS/MS 4.5 0.5 1 1 2 913920 913920 0 7073 988 7308 17542;17543 14196 14196 1 67800 0 IYGFYDECK FFLLRGNHECASINRIYGFYDECKRRYNIK CASINRIYGFYDECKRRYNIKLWKTFTDCF R I Y C K R 0 0 0 1 1 0 1 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 9 0 1193.5063 P36873;P62136;P62140 P62136 133 141 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 0.0093756 101.54 By MS/MS 8 0.816 1 1 1 3 3528900 3528900 0 7074 1139;840;1140 7309 17544;17545;17546 14197;14198 14197 2 48967 0 IYGISFPDPK STYWEGKADMETLQRIYGISFPDPKMLKEW ETLQRIYGISFPDPKMLKEWEKFQEEAKNR R I Y P K M 0 0 0 1 0 0 0 1 0 2 0 1 0 1 2 1 0 0 1 0 0 0 10 0 1135.5914 P26639 P26639 297 306 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 0.0045125 106.68 By MS/MS 4.5 0.5 1 1 2 1170900 1170900 0 7075 734 7310 17547;17548 14199;14200 14200 2 48801 0 IYGLGSLALYEK AAKYARAERELKPARIYGLGSLALYEKADI PARIYGLGSLALYEKADIKGPEDKKKHLLI R I Y E K A 1 0 0 0 0 0 1 2 0 1 3 1 0 0 0 1 0 0 2 0 0 0 12 0 1325.7231 P36542 P36542 68 79 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 5.0402E-06 205.18 By MS/MS 8.4 1.02 1 2 1 1 5 10970000 10970000 0 7076 835 7311 17549;17550;17551;17552;17553 14201;14202;14203;14204;14205;14206 14202 6 146440 0 IYIDSNNNPER HEGCEEPATHNALAKIYIDSNNNPERFLRE ALAKIYIDSNNNPERFLRENPYYDSRVVGK K I Y E R F 0 1 3 1 0 0 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1333.6262 Q00610 Q00610 882 892 CLTC Clathrin heavy chain 1 yes yes 2 4.5615E-09 206.49 By MS/MS By MS/MS 2.57 1.18 2 1 2 2 4 3 4827600 4136600 690930 7077 1262 7312 17554;17555;17556;17557;17558;17559;17560 14207;14208;14209;14210;14211;14212 14210 6 605630 333590 IYISLLK PARGYELLFQPEVVRIYISLLKESKTPAIL LFQPEVVRIYISLLKESKTPAILEASAGAI R I Y L K E 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 1 0 0 1 0 0 0 7 0 848.53714 O60716 O60716 667 673 CTNND1 Catenin delta-1 yes yes 2 0.048248 90.986 By MS/MS 4 0 1 1 892560 892560 0 7078 272 7313 17561 14213 14213 1 83995 0 IYKLDDPSCPRPECYR LERNITIKLGYANAKIYKLDDPSCPRPECY YKLDDPSCPRPECYRSCGSSTPDEFPTDIP K I Y Y R S 0 2 0 2 2 0 1 0 0 1 1 1 0 0 3 1 0 0 2 0 0 0 16 2 2067.9506 P41091 P41091 88 103 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 3;4 0.0027195 107.46 By MS/MS 6.33 0.471 2 1 3 20155000 20155000 0 7079 866 7314 17562;17563;17564 14214;14215 14214 2 141560 0 IYKSDGIK GAEREFRGLGDCLVKIYKSDGIKGLYQGFN LGDCLVKIYKSDGIKGLYQGFNVSVQGIII K I Y I K G 0 0 0 1 0 0 0 1 0 2 0 2 0 0 0 1 0 0 1 0 0 0 8 1 922.51238 P05141 P05141 164 171 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.013753 135.77 By MS/MS By MS/MS 5.3 3.23 1 2 2 1 2 1 1 9 1 36899000 36755000 143060 7080 487 7315 17565;17566;17567;17568;17569;17570;17571;17572;17573;17574 14216;14217;14218;14219 14218 4 1292200 193060 IYLDMLNVYK ACKAVGHPFVIQLGRIYLDMLNVYKCLSEN IQLGRIYLDMLNVYKCLSENISAAIQANGE R I Y Y K C 0 0 1 1 0 0 0 0 0 1 2 1 1 0 0 0 0 0 2 1 0 0 10 0 1270.6631 O14980 O14980 713 722 XPO1 Exportin-1 yes yes 2 0.0012543 117.89 By MS/MS 4 0 2 2 762810 762810 0 7081 153 7316;7317 17575;17576 14220;14221 14220 86 2 71785 0 IYNNIPANLR AKKVLSVAVYNHYKRIYNNIPANLRQQAEV NHYKRIYNNIPANLRQQAEVEKQTSLTPRE R I Y L R Q 1 1 3 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1186.6459 O76031 O76031 201 210 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00045032 127.56 By MS/MS 5 0 1 1 3074100 3074100 0 7082 360 7318 17577 14222 14222 1 30831 0 IYQDAYR RIAQRWRELPDSKKKIYQDAYRAEWQVYKE ELPDSKKKIYQDAYRAEWQVYKEEISRFKE K I Y Y R A 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 7 0 927.44503 Q00059 Q00059 98 104 TFAM Transcription factor A, mitochondrial yes yes 2 0.04221 95.531 By MS/MS By matching 9 0 2 1 1 2986100 2952600 33493 7083 1258 7319 17578;17579 14223 14223 1 58108 76375 IYQIYEGTSQIQR FNTEYPVEKLMRDAKIYQIYEGTSQIQRLI AKIYQIYEGTSQIQRLIVAREHIDKYKN__ K I Y Q R L 0 1 0 0 0 3 1 1 0 3 0 0 0 0 0 1 1 0 2 0 0 0 13 0 1597.81 P11310 P11310 396 408 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 2.8938E-33 350.95 By MS/MS 8 0.816 1 1 1 3 9383100 9383100 0 7084 577 7320 17580;17581;17582 14224;14225 14224 2 143780 0 IYQVLDFR WIRFGYDPRKNPDAKIYQVLDFRIRCGMKH RKNPDAKIYQVLDFRIRCGMKHGYAPSDLP K I Y F R I 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 Q9Y5Q8 Q9Y5Q8 315 322 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.0013345 149.65 By MS/MS 6 0.816 1 1 1 3 1953300 1953300 0 7085 2919 7321 17583;17584;17585 14226 14226 1 15643 0 IYQWINELSSPETR AAPVPTTLAQVDREKIYQWINELSSPETRE KIYQWINELSSPETRENALLELSKKRESVP K I Y T R E 0 1 1 0 0 1 2 0 0 2 1 0 0 0 1 2 1 1 1 0 0 0 14 0 1734.8577 Q92600 Q92600 22 35 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 0.032823 76.588 By MS/MS 8 0 1 1 152460 152460 0 7086 2060 7322 17586 14227 14227 1 1924.8 0 IYSFGLGGR RTSDLGKSFKTIGVKIYSFGLGGRFLFASV KTIGVKIYSFGLGGRFLFASVMADKDTTRR K I Y G R F 0 1 0 0 0 0 0 3 0 1 1 0 0 1 0 1 0 0 1 0 0 0 9 0 968.50797 Q99523 Q99523 303 311 SORT1 Sortilin yes yes 2 0.00011277 147.52 By MS/MS 4 0 1 1 0 0 0 7087 2248 7323 17587 14228 14228 1 0 0 IYSNNQYAR NKFDLVSFIPLLRERIYSNNQYARQFIISW PLLRERIYSNNQYARQFIISWILVLESVPD R I Y A R Q 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 0 9 0 1127.536 Q08AM6 Q08AM6 184 192 VAC14 Protein VAC14 homolog yes yes 2 0.000324 147.29 By MS/MS 4.5 0.5 1 1 2 1641500 1641500 0 7088 1316 7324 17588;17589 14229;14230 14229 2 116880 0 IYSVEALPVAAVNVQSTQ DKLEMEDAVTFLKTKIYSVEALPVAAVNVQ VEALPVAAVNVQSTQ_______________ K I Y T Q - 3 0 1 0 0 2 1 0 0 1 1 0 0 0 1 2 1 0 1 4 0 0 18 0 1887.9942 Q9NYY8 Q9NYY8 693 710 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.00028215 165.86 By MS/MS 6 0 1 1 882540 882540 0 7089 2640 7325 17590 14231 14231 1 6066.8 0 IYSYVVSRPQPR PPPSRPLQVNTADHRIYSYVVSRPQPRGLL DHRIYSYVVSRPQPRGLLGWGYYLIMLPFR R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 2;3 0.034573 83.948 By MS/MS 6.33 0.471 2 1 3 10869000 10869000 0 7090 2126 7326 17591;17592;17593 14232;14233 14233 2 77776 0 IYTDAGR SEVSMIRDIREREIRIYTDAGRICRPLLIV DIREREIRIYTDAGRICRPLLIVEKQKLLL R I Y G R I 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 7 0 794.39227 P30876 P30876 614 620 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.046647 92.191 By MS/MS 7 0 1 1 1906200 1906200 0 7091 781 7327 17594 14234 14234 1 29924 0 IYVEIER KLRLIDTLRMVTEGKIYVEIERARLTKTLA LRMVTEGKIYVEIERARLTKTLATIKEQNG K I Y E R A 0 1 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 7 0 920.49673 O00232 O00232 136 142 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.0534 89.142 By MS/MS 6 0 1 1 10482000 10482000 0 7092 94 7328 17595 14235 14235 1 72055 0 IYVGNASVAQDIPK CYSLPSQPCNEVTPRIYVGNASVAQDIPKL RIYVGNASVAQDIPKLQKLGITHVLNAAEG R I Y P K L 2 0 1 1 0 1 0 1 0 2 0 1 0 0 1 1 0 0 1 2 0 0 14 0 1473.7827 P51452 P51452 37 50 DUSP3 Dual specificity protein phosphatase 3 yes yes 2 8.6893E-17 255.41 By MS/MS 9 0 1 1 656130 656130 0 7093 994 7329 17596 14236 14236 1 12913 0 IYVISLAEPR IGSCTQQDVELHVQKIYVISLAEPRLPLQL LHVQKIYVISLAEPRLPLQLDDAVRPEAEG K I Y P R L 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1159.6601 P14868 P14868 142 151 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.00015875 149.94 By MS/MS 4.67 2.56 1 1 1 1 1 1 6 6908400 6908400 0 7094 620 7330 17597;17598;17599;17600;17601;17602 14237;14238;14239;14240 14240 4 190740 0 IYYGTEAQIGER HEDWRQEYVLNESGRIYYGTEAQIGERTWN SGRIYYGTEAQIGERTWNYGQFDHGVLDAC R I Y E R T 1 1 0 0 0 1 2 2 0 2 0 0 0 0 0 0 1 0 2 0 0 0 12 0 1398.6779 P22735 P22735 275 286 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 2 1.2689E-05 175.33 By MS/MS 3 0 1 1 469300 0 469300 7095 697 7331 17603 14241 14241 1 0 59735 KAAAPAPEEEMDECEQALAAEPK REEKQKPQAERKEEKKAAAPAPEEEMDECE EEMDECEQALAAEPKAKDPFAHLPKSTFVL K K A P K A 7 0 0 1 1 1 6 0 0 0 1 2 1 0 3 0 0 0 0 0 0 0 23 1 2484.1149 P26641 P26641 253 275 EEF1G Elongation factor 1-gamma yes yes 3 0.01317 66.644 By MS/MS 6.5 0.5 2 2 4 6350900 6350900 0 7096 736 7332;7333 17604;17605;17606;17607 14242;14243 14242 367 1 52689 0 KAAIISAEGDSK AERARFVVEKAEQQKKAAIISAEGDSKAAE QQKKAAIISAEGDSKAAELIANSLATAGDG K K A S K A 3 0 0 1 0 0 1 1 0 2 0 2 0 0 0 2 0 0 0 0 0 0 12 1 1188.635 P35232 P35232 208 219 PHB Prohibitin yes yes 2;3 0.0035461 129.82 By MS/MS By matching 8 0 3 2 1 5051200 4999400 51809 7097 814 7334 17608;17609;17610 14244;14245 14244 2 63117 69914 KAALSASEGEEVPQDK ERISGLGLTPEQKQKKAALSASEGEEVPQD AALSASEGEEVPQDKAPSHVPFLLIGGGTA K K A D K A 3 0 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1657.8159 O95831 O95831 112 127 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 0.0015372 205.26 By MS/MS 5 0 2 2 2754200 2754200 0 7098 429 7335 17611;17612 14246;14247 14247 2 27623 0 KAASLTEDR EERSRERPSQPEGLRKAASLTEDRDRGRDA QPEGLRKAASLTEDRDRGRDAVKREAALPP R K A D R D 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 9 1 989.51417 Q04637 Q04637 1206 1214 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00858 114.86 By MS/MS 2 0 1 1 498080 498080 0 7099 1291 7336 17613 14248 14248 1 168470 0 KAASLTEDRDR EERSRERPSQPEGLRKAASLTEDRDRGRDA EGLRKAASLTEDRDRGRDAVKREAALPPVS R K A D R G 2 2 0 2 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 11 2 1260.6422 Q04637 Q04637 1206 1216 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00017772 151.22 By MS/MS 3.5 1.5 1 1 2 2549300 2549300 0 7100 1291 7337 17614;17615 14249;14250 14249 2 648770 0 KACGDSTLTQITAGLDPVGR RQEAEQLRNQIRDARKACGDSTLTQITAGL STLTQITAGLDPVGRIQMRTRRTLRGHLAK R K A G R I 2 1 0 2 1 1 0 3 0 1 2 1 0 0 1 1 3 0 0 1 0 0 20 1 2059.0368 P62879 P62879 23 42 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes yes 3 0.010682 73.984 By MS/MS 8 0 1 1 655100 655100 0 7101 1181 7338 17616 14251 14251 1 8270.6 0 KACQIFVR GSFGGAGGHAPGVARKACQIFVRNLPFDFT HAPGVARKACQIFVRNLPFDFTWKMLKDKF R K A V R N 1 1 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 8 1 1020.5539 P52272 P52272 651 658 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0011575 163.34 By MS/MS 5 0 1 1 2605700 2605700 0 7102 1012 7339 17617 14252 14252 1 26134 0 KADEVLEILK RQLSRFYDDAIVSQKKADEVLEILKTASDD IVSQKKADEVLEILKTASDDRECENQLVLL K K A L K T 1 0 0 1 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1156.6703 O75643 O75643 285 294 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 5.6135E-07 185.33 By MS/MS 3 1.41 1 1 1 1 1 5 2579500 2579500 0 7103 340 7340 17618;17619;17620;17621;17622 14253;14254 14254 2 559140 0 KADIDLTK AIKGVGRRYAHVVLRKADIDLTKRAGELTE YAHVVLRKADIDLTKRAGELTEDEVERVIT R K A T K R 1 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 902.5073 P62269 P62269 47 54 RPS18 40S ribosomal protein S18 yes yes 2 0.0081174 137.14 By MS/MS By MS/MS 9.75 0.433 1 3 1 3 6958500 6676700 281820 7104 1149 7341 17623;17624;17625;17626 14255;14256 14255 2 359850 576130 KADIDLTKR AIKGVGRRYAHVVLRKADIDLTKRAGELTE AHVVLRKADIDLTKRAGELTEDEVERVITI R K A K R A 1 1 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 9 2 1058.6084 P62269 P62269 47 55 RPS18 40S ribosomal protein S18 yes yes 2;3 0.0002482 174.86 By MS/MS By matching 9.4 0.49 3 2 4 1 55209000 55177000 31736 7105 1149 7342 17627;17628;17629;17630;17631 14257;14258;14259;14260 14258 4 1312800 72368 KADKVEQR QLAVNKIKEIAVTVKKADKVEQRKLLEKCA EIAVTVKKADKVEQRKLLEKCAMTALSSKL K K A Q R K 1 1 0 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 8 2 972.53524 Q99832 Q99832 145 152 CCT7 T-complex protein 1 subunit eta yes yes 2 0.020626 136.27 By MS/MS 5.43 2.77 1 1 1 1 1 1 1 7 2745700 2745700 0 7106 2270 7343 17632;17633;17634;17635;17636;17637;17638 14261;14262;14263 14263 3 36568 0 KAEAGAGSATEFQFR RDTYRRSAVPPGADKKAEAGAGSATEFQFR KAEAGAGSATEFQFRGGFGRGRGQPPQ___ K K A F R G 4 1 0 0 0 1 2 2 0 0 0 1 0 2 0 1 1 0 0 0 0 0 15 1 1568.7583 P46783;Q9NQ39 P46783 139 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2;3 3.686E-85 387.8 By MS/MS By MS/MS 9.4 0.49 3 2 4 1 64870000 64810000 59725 7107 920 7344 17639;17640;17641;17642;17643 14264;14265;14266;14267;14268 14268 5 1411400 136190 KAEALEAAIENLNEAK AKCQVASAASYDQPKKAEALEAAIENLNEA AEALEAAIENLNEAKNYFAKVDCKERIRDV K K A A K N 5 0 2 0 0 0 4 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 16 1 1712.8945 Q9UJX4 Q9UJX4 683 698 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2;3 1.6261E-33 314.45 By MS/MS 5 0 2 2 2599300 2599300 0 7108 2753 7345 17644;17645 14269;14270 14270 2 26070 0 KAEAQIAAK YRDDNGKPYVLPSVRKAEAQIAAKNLDKEY VLPSVRKAEAQIAAKNLDKEYLPIGGLAEF R K A A K N 4 0 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 928.53418 P00505 P00505 82 90 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 1.1842E-06 195.05 By MS/MS By matching 7 0 2 1 1 2320500 2310700 9701.3 7109 446 7346 17646;17647 14271 14271 1 36275 17472 KAEEELGELEAK YDTRKSRLELQKDVRKAEEELGELEAKLNE DVRKAEEELGELEAKLNENLRRNIERINNE R K A A K L 2 0 0 0 0 0 5 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 12 1 1344.6773 Q9UQE7 Q9UQE7 684 695 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.1902E-12 245.13 By MS/MS 2.5 0.5 1 1 2 1391400 1391400 0 7110 2807 7347 17648;17649 14272 14272 1 67219 0 KAEEIANEMIEAAK FDFTAKGAMSTQQIKKAEEIANEMIEAAKA KKAEEIANEMIEAAKAVYTQDCPLAAAKAI K K A A K A 4 0 1 0 0 0 4 0 0 2 0 2 1 0 0 0 0 0 0 0 0 0 14 1 1545.7709 P49588 P49588 651 664 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.012349 91.858 By MS/MS 4 0 1 1 954130 954130 0 7111 951 7348 17650 14273 14273 0 89790 0 KAEEKYEVLENK EESEETLKNTKEIQRKAEEKYEVLENKMKN IQRKAEEKYEVLENKMKNAEAERERELKDA R K A N K M 1 0 1 0 0 0 4 0 0 0 1 3 0 0 0 0 0 0 1 1 0 0 12 2 1478.7617 O95347 O95347 768 779 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.00024059 145.14 By MS/MS 4 0.816 1 1 1 3 1851100 1851100 0 7112 405 7349 17651;17652;17653 14274 14274 1 53377 0 KAEEVQAWAQR EEREQEQRQALEQARKAEEVQAWAQRKERE EQARKAEEVQAWAQRKEREVLQLQEEVKNF R K A Q R K 3 1 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 11 1 1314.668 Q9BYN8 Q9BYN8 142 152 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2;3 2.2777E-05 193.83 By MS/MS 8.5 0.5 2 2 4 3867800 3867800 0 7113 2374 7350 17654;17655;17656;17657 14275;14276;14277 14276 3 56115 0 KAEEVQAWAQRK EEREQEQRQALEQARKAEEVQAWAQRKERE QARKAEEVQAWAQRKEREVLQLQEEVKNFI R K A R K E 3 1 0 0 0 2 2 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 12 2 1442.763 Q9BYN8 Q9BYN8 142 153 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 3 0.018746 118.61 By MS/MS 8.5 0.5 1 1 2 2531200 2531200 0 7114 2374 7351 17658;17659 14278 14278 1 37067 0 KAEIGIAMGSGTAVAK TAMTGDGVNDAPALKKAEIGIAMGSGTAVA AEIGIAMGSGTAVAKTASEMVLADDNFSTI K K A A K T 4 0 0 0 0 0 1 3 0 2 0 2 1 0 0 1 1 0 0 1 0 0 16 1 1502.8127 P16615;O14983;Q93084 P16615 712 727 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 3 0.0025922 102.39 By MS/MS 1.8 0.748 2 2 1 5 1847100 1847100 0 7115 635 7352;7353 17660;17661;17662;17663;17664 14279;14280;14281 14280 307 3 502600 0 KAELLDNEKPAAVVAPITTGYTVK IETEIKNKMQQKSQKKAELLDNEKPAAVVA PAAVVAPITTGYTVKISNYGWDQSDKFVKI K K A V K I 4 0 1 1 0 0 2 1 0 1 2 3 0 0 2 0 3 0 1 3 0 0 24 2 2527.3898 Q9HB71 Q9HB71 51 74 CACYBP Calcyclin-binding protein yes yes 3 0.0007639 88.504 By MS/MS 8 0 1 1 2111800 2111800 0 7116 2501 7354 17665 14282 14282 1 26661 0 KAEVEGKDLPEHAVLK VVCPKDEDYKQRTQKKAEVEGKDLPEHAVL AEVEGKDLPEHAVLKMKGNFTLPEVAECFD K K A L K M 2 0 0 1 0 0 3 1 1 0 2 3 0 0 1 0 0 0 0 2 0 0 16 2 1761.9625 Q00839 Q00839 620 635 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3;4 0.0011034 113.43 By MS/MS 3.67 0.471 1 2 3 1441900 1441900 0 7117 1264 7355 17666;17667;17668 14283;14284 14284 2 123770 0 KAFSGYLGTDQSK AFAPICNPVLCPWGKKAFSGYLGTDQSKWK GKKAFSGYLGTDQSKWKAYDATHLVKSYPG K K A S K W 1 0 0 1 0 1 0 2 0 0 1 2 0 1 0 2 1 0 1 0 0 0 13 1 1400.6936 P10768 P10768 186 198 ESD S-formylglutathione hydrolase yes yes 2 0.0031563 127.52 By MS/MS 8 0 1 1 633660 633660 0 7118 568 7356 17669 14285 14285 1 7999.9 0 KAGGTDAPSANGEAGGESTK GDQPPPTDTTHATHRKAGGTDAPSANGEAG DAPSANGEAGGESTKGYTAEQVAAVKRVKQ R K A T K G 4 0 1 1 0 0 2 5 0 0 0 2 0 0 1 2 2 0 0 0 0 0 20 1 1803.8235 Q9NXW2 Q9NXW2 73 92 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 3 0.018962 68.625 By MS/MS 7 0 1 1 344310 344310 0 7119 2630 7357 17670 14286 14286 0 5405.1 0 KAGNFYVPAEPK RQMYRTEIRMARMARKAGNFYVPAEPKLAF MARKAGNFYVPAEPKLAFVIRIRGINGVSP R K A P K L 2 0 1 0 0 0 1 1 0 0 0 2 0 1 2 0 0 0 1 1 0 0 12 1 1319.6874 P18124 P18124 77 88 RPL7 60S ribosomal protein L7 yes yes 2 0.0013264 138.25 By MS/MS 8 0 1 1 2353600 2353600 0 7120 652 7358 17671 14287 14287 1 29714 0 KAGQVFLEELGNHK YFGWFLTKKSSETLRKAGQVFLEELGNHKA RKAGQVFLEELGNHKAFKKELRQFVPGDEP R K A H K A 1 0 1 0 0 1 2 2 1 0 2 2 0 1 0 0 0 0 0 1 0 0 14 1 1568.8311 P09543 P09543 204 217 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.00053992 142.39 By MS/MS 7 0 1 1 623120 623120 0 7121 537 7359 17672 14288 14288 1 9781.9 0 KAHEILPNLVCCSAK LSVSEVIEGYEIACRKAHEILPNLVCCSAK KAHEILPNLVCCSAKNLRDIDEVSSLLRTS R K A A K N 2 0 1 0 2 0 1 0 1 1 2 2 0 0 1 1 0 0 0 1 0 0 15 1 1738.8858 P50990 P50990 138 152 CCT8 T-complex protein 1 subunit theta yes yes 2;3 3.6651E-23 276.41 By MS/MS 6.4 1.02 1 2 1 1 5 39573000 39573000 0 7122 984 7360 17673;17674;17675;17676;17677 14289;14290 14290 2 283520 0 KAHLGTALK RSHRRDQKWHDKQYKKAHLGTALKANPFGG HDKQYKKAHLGTALKANPFGGASHAKGIVL K K A L K A 2 0 0 0 0 0 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 9 1 937.5709 P62266 P62266 29 37 RPS23 40S ribosomal protein S23 yes yes 2 0.0055138 126.24 By MS/MS 9.5 0.5 1 1 2 2878400 2878400 0 7123 1148 7361 17678;17679 14291;14292 14291 2 101550 0 KAIIIFVPVPQLK LNITAAKEIEVGGGRKAIIIFVPVPQLKSF GRKAIIIFVPVPQLKSFQKIQVRLVRELEK R K A L K S 1 0 0 0 0 1 0 0 0 3 1 2 0 1 2 0 0 0 0 2 0 0 13 1 1464.9432 P62081 P62081 58 70 RPS7 40S ribosomal protein S7 yes yes 2 0.023502 98.048 By MS/MS 9 0 1 1 97732 97732 0 7124 1138 7362 17680 14293 14293 1 1923.4 0 KALCDPLEEVR DAVLYFSESLVPTARKALCDPLEEVREAAA PTARKALCDPLEEVREAAAKTFEQLHSTIG R K A V R E 1 1 0 1 1 0 2 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 11 1 1328.6758 Q92616 Q92616 2012 2022 GCN1L1 Translational activator GCN1 yes yes 2;3 0.020373 101.39 By MS/MS 2.33 0.471 2 1 3 1280200 1280200 0 7125 2064 7363 17681;17682;17683 14294;14295 14295 2 305780 0 KALCDPLEEVREAAAK DAVLYFSESLVPTARKALCDPLEEVREAAA ALCDPLEEVREAAAKTFEQLHSTIGHQALE R K A A K T 4 1 0 1 1 0 3 0 0 0 2 2 0 0 1 0 0 0 0 1 0 0 16 2 1798.9247 Q92616 Q92616 2012 2027 GCN1L1 Translational activator GCN1 yes yes 3 0.004035 102.63 By MS/MS 2 0 1 1 551920 551920 0 7126 2064 7364 17684 14296 14296 1 186680 0 KALDDMISTLKK LEQQMHPTVVISAYRKALDDMISTLKKISI AYRKALDDMISTLKKISIPVDISDSDMMLN R K A K K I 1 0 0 2 0 0 0 0 0 1 2 3 1 0 0 1 1 0 0 0 0 0 12 2 1361.7588 P49368 P49368 128 139 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.00069722 128.57 By MS/MS 5.33 0.471 2 1 3 4356400 4356400 0 7127 947 7365;7366 17685;17686;17687 14297;14298 14298 516 2 35871 0 KANNSQEPSPQLASSVASTR TGTEHLKESEADNTKKANNSQEPSPQLASS QEPSPQLASSVASTRSMPESLDSPTSGRPG K K A T R S 3 1 2 0 0 2 1 0 0 0 1 1 0 0 2 5 1 0 0 1 0 0 20 1 2071.0294 Q96HC4 Q96HC4 305 324 PDLIM5 PDZ and LIM domain protein 5 yes yes 3 0.0010807 93.804 By MS/MS 5 0 1 1 348250 348250 0 7128 2164 7367 17688 14299 14299 1 3492.8 0 KAPKEDVDAAVK RVAVQGDVVRELKAKKAPKEDVDAAVKQLL KAKKAPKEDVDAAVKQLLSLKAEYKEKTGQ K K A V K Q 3 0 0 2 0 0 1 0 0 0 0 3 0 0 1 0 0 0 0 2 0 0 12 2 1269.6929 P07814 P07814 771 782 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.00020956 142.19 By MS/MS 3.2 0.748 1 2 2 5 6438300 6438300 0 7129 512 7368 17689;17690;17691;17692;17693 14300;14301;14302;14303 14301 4 280820 0 KAPQHTAVGFK LEYSEARRTMTNALRKAPQHTAVGFKQTVH NALRKAPQHTAVGFKQTVHKLLIVVELLLG R K A F K Q 2 0 0 0 0 1 0 1 1 0 0 2 0 1 1 0 1 0 0 1 0 0 11 1 1182.6509 O43242 O43242 315 325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.019875 80.916 By MS/MS 5.5 0.5 1 1 2 2739700 2739700 0 7130 198 7369 17694;17695 14304 14304 1 20438 0 KAPSEASAQEQR GEVVEQKRAPGKQPRKAPSEASAQEQREKQ QPRKAPSEASAQEQREKQPLEESASRAPST R K A Q R E 3 1 0 0 0 2 2 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 12 1 1300.6371 Q9HC36 Q9HC36 60 71 RNMTL1 rRNA methyltransferase 3, mitochondrial yes yes 2;3 0.00015471 150.09 By MS/MS By MS/MS 6 0 4 2 2 1843800 1796100 47613 7131 2511 7370 17696;17697;17698;17699 14305;14306;14307 14307 3 12347 48790 KAPTSSSQR WGDIYFNPKTRKFTKKAPTSSSQRSFVEFI TRKFTKKAPTSSSQRSFVEFILEPLYKILA K K A Q R S 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 3 1 0 0 0 0 0 9 1 960.49886 Q15029 Q15029 359 367 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.036168 99.442 By MS/MS 3.5 1.12 1 1 1 1 4 235940 235940 0 7132 1476 7371 17700;17701;17702;17703 14308 14308 1 16310 0 KAPTTDEDKK EEEGKQTALASRFLKKAPTTDEDKKAAEKK SRFLKKAPTTDEDKKAAEKKREDKAKKKHD K K A K K A 1 0 0 2 0 0 1 0 0 0 0 3 0 0 1 0 2 0 0 0 0 0 10 2 1131.5772 Q99613;B5ME19 Q99613 259 268 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.022041 107.55 By MS/MS 7 0 2 2 82586 82586 0 7133 2252 7372 17704;17705 14309;14310 14310 2 1296.5 0 KAQCPIVER YLPHSAGRYAAKRFRKAQCPIVERLTNSMM AAKRFRKAQCPIVERLTNSMMMHGRNNGKK R K A E R L 1 1 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 9 1 1099.5808 P46782 P46782 63 71 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2;3 0.0055138 126.24 By MS/MS By matching 9.2 0.4 4 1 3 2 22591000 22512000 79106 7134 919 7373 17706;17707;17708;17709;17710 14311;14312 14311 2 446570 180390 KAQDEGLLSDVVPFKVPGK LEQDEYALRSHSLAKKAQDEGLLSDVVPFK EGLLSDVVPFKVPGKDTVTKDNGIRPSSLE K K A G K D 1 0 0 2 0 1 1 2 0 0 2 3 0 1 2 1 0 0 0 3 0 0 19 2 2026.1099 P55084 P55084 254 272 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 3 5.4389E-05 137.27 By MS/MS 6 0 1 1 1260200 1260200 0 7135 1055 7374 17711 14313 14313 1 8662.9 0 KASAAQLR KKEEESAGGTKGSSKKASAAQLRIQKDINE GTKGSSKKASAAQLRIQKDINELNLPKTCD K K A L R I 3 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 1 843.49265 P61081 P61081 26 33 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.036144 110.12 By MS/MS 9.5 0.5 1 1 2 1718200 1718200 0 7136 1108 7375 17712;17713 14314 14314 1 41399 0 KASDVHEVR GVEQDVDMVFASFIRKASDVHEVRKVLGEK FASFIRKASDVHEVRKVLGEKGKNIKIISK R K A V R K 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 9 1 1039.5411 P14618 P14618 247 255 PKM Pyruvate kinase PKM yes yes 3 0.046053 79.148 By MS/MS 3.5 2.5 1 1 2 1776200 1776200 0 7137 614 7376 17714;17715 14315;14316 14315 2 12210 0 KASDVHEVRK GVEQDVDMVFASFIRKASDVHEVRKVLGEK ASFIRKASDVHEVRKVLGEKGKNIKIISKI R K A R K V 1 1 0 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 0 2 0 0 10 2 1167.636 P14618 P14618 247 256 PKM Pyruvate kinase PKM yes yes 2;3 0.0072881 112.85 By MS/MS 6.5 0.5 1 1 2 1434400 1434400 0 7138 614 7377 17716;17717 14317;14318 14317 2 9860.1 0 KASGPPVSELITK PVKKKAAKKAGGTPRKASGPPVSELITKAV PRKASGPPVSELITKAVAASKERSGVSLAA R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P10412;P16402;P16403 P16403 34 46 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 2 0.0055979 116.74 By MS/MS 7 0.816 1 1 1 3 4092600 4092600 0 7139 560;633 7378 17718;17719;17720 14319;14320;14321 14320 3 51355 0 KAVGGLGK KQRSSLLEKGLDGAKKAVGGLGKLGKDAVE KGLDGAKKAVGGLGKLGKDAVEDLESVGKG K K A G K L 1 0 0 0 0 0 0 3 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 1 728.45447 P81605 P81605 75 82 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 2 0.026417 120.65 By matching By MS/MS 2.25 0.829 1 1 2 1 3 1015900 470960 544940 7140 1228 7379 17721;17722;17723;17724 14322 14322 1 8617.2 199090 KAWENSPNVR PPTTFSLTFKMESARKAWENSPNVREKGSP MESARKAWENSPNVREKGSPVTSTAPPIAT R K A V R E 1 1 2 0 0 0 1 0 0 0 0 1 0 0 1 1 0 1 0 1 0 0 10 1 1199.6047 Q9Y520 Q9Y520 2255 2264 PRRC2C Protein PRRC2C yes yes 2 0.0035413 122.94 By MS/MS 1 0 1 1 107050 107050 0 7141 2905 7380 17725 14323 14323 1 25796 0 KAYLPQELLGK IVSALSQTGSLFKPRKAYLPQELLGKEGFD FKPRKAYLPQELLGKEGFDALDPFIPILVS R K A G K E 1 0 0 0 0 1 1 1 0 0 3 2 0 0 1 0 0 0 1 0 0 0 11 1 1258.7285 P51398 P51398 321 331 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0038077 119.34 By MS/MS 7.5 0.5 1 1 2 5076200 5076200 0 7142 993 7381 17726;17727 14324 14324 1 78764 0 KAYYQLAK QILGVPRNASQKEIKKAYYQLAKKYHPDTN ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE K K A A K K 2 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0 2 0 0 0 8 1 983.54402 Q96EY1 Q96EY1 111 118 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.047559 106.42 By MS/MS 7 0 1 1 2793600 2793600 0 7143 2150 7382 17728 14325 14325 1 43854 0 KCAHILTK LQEARVFNETPINPRKCAHILTKILYLINQ ETPINPRKCAHILTKILYLINQGEHLGTTE R K C T K I 1 0 0 0 1 0 0 0 1 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 969.54297 Q9Y678 Q9Y678 43 50 COPG1 Coatomer subunit gamma-1 yes yes 3 0.010301 105.14 By MS/MS 4 0 1 1 784580 784580 0 7144 2933 7383 17729 14326 14326 1 73834 0 KCEQVLIEK VQVYLHESTQDELARKCEQVLIEKHLEIFH QDELARKCEQVLIEKHLEIFHTEFQNLLDA R K C E K H 0 0 0 0 1 1 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1145.6114 Q13616 Q13616 290 298 CUL1 Cullin-1 yes yes 2 0.0023647 140.83 By MS/MS 4 0 1 1 1654500 1654500 0 7145 1402 7384 17730 14327 14327 1 155700 0 KCNTDQAGRPK NIAMRPGLEGYALPRKCNTDQAGRPKCPLD ALPRKCNTDQAGRPKCPLDPYFIMPDKCKC R K C P K C 1 1 1 1 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 11 2 1273.6197 P33992 P33992 196 206 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00015343 163.66 By MS/MS 4 0 1 1 117910 117910 0 7146 807 7385 17731 14328 14328 1 11096 0 KCPFTGNVSIR FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL YIDKKCPFTGNVSIRGRILSGVVTKMKMQR K K C I R G 0 1 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 11 1 1277.655 P62280 P62280 59 69 RPS11 40S ribosomal protein S11 yes yes 3 0.0038142 102.4 By MS/MS 9 0 1 1 410020 410020 0 7147 1152 7386 17732 14329 14329 1 8069.4 0 KCQDVIVAAR LLKYARNINSHFANKKCQDVIVAARNLMTS HFANKKCQDVIVAARNLMTSEIHNTVKIIP K K C A R N 2 1 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 10 1 1158.6179 O43264 O43264 403 412 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.0040131 120.27 By MS/MS 4 0 1 1 504800 504800 0 7148 200 7387 17733 14330 14330 1 47505 0 KDAEAWFNEK NNMRSQYEQLAEQNRKDAEAWFNEKSKELT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI R K D E K S 2 0 1 1 0 0 2 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 10 1 1236.5775 CON__P13645;P13645;CON__Q7Z3Y7;Q7Z3Y7 CON__P13645 334 343 KRT10;KRT28 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28 yes no 2 6.3787E-08 190.57 By MS/MS By MS/MS 3.2 1.72 1 1 1 1 1 2 3 16169000 4950700 11218000 + 7149 50 7388 17734;17735;17736;17737;17738 14331;14332 14331 2 287780 1602000 KDAHSNLLAK DSWLKSLFVRKVDPRKDAHSNLLAKKETSN KVDPRKDAHSNLLAKKETSNLYKLQFHNVK R K D A K K 2 0 1 1 0 0 0 0 1 0 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1095.6037 O75323 O75323 58 67 GBAS Protein NipSnap homolog 2 yes yes 2 6.1127E-07 183.72 By MS/MS 8 0 1 1 3550900 3550900 0 7150 310 7389 17739 14333 14333 1 44829 0 KDAHSTLLSK GSWFRSLFVHKVDPRKDAHSTLLSKKETSN KVDPRKDAHSTLLSKKETSNLYKIQFHNVK R K D S K K 1 0 0 1 0 0 0 0 1 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1098.6033 Q9BPW8 Q9BPW8 56 65 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 6.6874E-07 181.87 By MS/MS 8 0 1 1 5980000 5980000 0 7151 2278 7390 17740 14334 14334 1 75496 0 KDAHSTLLSKK GSWFRSLFVHKVDPRKDAHSTLLSKKETSN VDPRKDAHSTLLSKKETSNLYKIQFHNVKP R K D K K E 1 0 0 1 0 0 0 0 1 0 2 3 0 0 0 2 1 0 0 0 0 0 11 2 1226.6983 Q9BPW8 Q9BPW8 56 66 NIPSNAP1 Protein NipSnap homolog 1 yes yes 3 0.00010326 150.04 By MS/MS 8 0 1 1 1608200 1608200 0 7152 2278 7391 17741 14335 14335 1 20304 0 KDAVALCSMAK RLMVRNAAVALQEERKDAVALCSMAKLFAT QEERKDAVALCSMAKLFATDECFAICNQAL R K D A K L 3 0 0 1 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 1 0 0 11 1 1192.5944 Q9UKU7 Q9UKU7 345 355 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 0.024887 93.598 By MS/MS 5.5 0.5 1 1 2 1381000 1381000 0 7153 2764 7392 17742;17743 14336 14336 1163 1 13570 0 KDDEENYLDLFSHK LLTAEIEKIQKGDSKKDDEENYLDLFSHKN KKDDEENYLDLFSHKNMKLKERVLIPVKQY K K D H K N 0 0 1 3 0 0 2 0 1 0 2 2 0 1 0 1 0 0 1 0 0 0 14 1 1751.8002 Q07666 Q07666 139 152 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 3 0.00079001 168 By MS/MS 5 0 1 1 1137000 1137000 0 7154 1301 7393 17744 14337 14337 1 11404 0 KDDGELPKSR KCEARGDPVPTVRWRKDDGELPKSRYEIRD TVRWRKDDGELPKSRYEIRDDHTLKIRKVT R K D S R Y 0 1 0 2 0 0 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1143.5884 Q9Y6N7 Q9Y6N7 297 306 ROBO1 Roundabout homolog 1 yes yes 2 0.00082311 138.98 By MS/MS 9 0 1 1 0 0 0 7155 2951 7394 17745 14338 14338 1 0 0 KDEDPENKIEFK KEEEELMEKPQKETKKDEDPENKIEFKTRL ETKKDEDPENKIEFKTRLGRNVYRMLFKSK K K D F K T 0 0 1 2 0 0 3 0 0 1 0 3 0 1 1 0 0 0 0 0 0 0 12 2 1490.7253 Q13123 Q13123 198 209 IK Protein Red yes yes 3 0.030424 114.24 By MS/MS 5 0 1 1 1085100 1085100 0 7156 1354 7395 17746 14339 14339 1 10883 0 KDEESGGGSNPFQHLEK ______________________________ EESGGGSNPFQHLEKSAVLQEARVFNETPI K K D E K S 0 0 1 1 0 1 3 3 1 0 1 2 0 1 1 2 0 0 0 0 0 0 17 1 1857.8493 Q9Y678 Q9Y678 8 24 COPG1 Coatomer subunit gamma-1 yes yes 3 0.019035 79.514 By MS/MS 4 0 1 1 924700 924700 0 7157 2933 7396 17747 14340 14340 0 87021 0 KDELLQQAR FSKSADERQRMLVQRKDELLQQARKRFLNK RMLVQRKDELLQQARKRFLNKSSEDDAASE R K D A R K 1 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1099.5986 Q9UKV5 Q9UKV5 586 594 AMFR E3 ubiquitin-protein ligase AMFR yes yes 2 0.042809 96.034 By MS/MS 1 0 1 1 60598 60598 0 7158 2765 7397 17748 14341 14341 1 14602 0 KDGADFAK TQGLDGLSERCAQYKKDGADFAKWRCVLKI ERCAQYKKDGADFAKWRCVLKIGEHTPSAL K K D A K W 2 0 0 2 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 8 1 850.41848 P04075;P09972 P04075 140 147 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C no no 2 0.026028 113.41 By MS/MS 7 0 1 1 555080 555080 0 7159 467;545 7398 17749 14342 14342 1 8713.8 0 KDGLVSLLTTSEGADEPQR PMALELMTVLVGSPRKDGLVSLLTTSEGAD VSLLTTSEGADEPQRLQFPLPTAQRSLEPG R K D Q R L 1 1 0 2 0 1 2 2 0 0 3 1 0 0 1 2 2 0 0 1 0 0 19 1 2015.0171 P51570 P51570 69 87 GALK1 Galactokinase yes yes 3 9.8409E-05 167.53 By MS/MS 7 0 1 1 738320 738320 0 7160 997 7399 17750 14343 14343 1 11590 0 KDHPFGFVAVPTK GIALSRLAQERKAWRKDHPFGFVAVPTKNP WRKDHPFGFVAVPTKNPDGTMNLMNWECAI R K D T K N 1 0 0 1 0 0 0 1 1 0 0 2 0 2 2 0 1 0 0 2 0 0 13 1 1441.7718 P63279 P63279 18 30 UBE2I SUMO-conjugating enzyme UBC9 yes yes 3 0.0042683 99.927 By MS/MS 10 0 1 1 391240 391240 0 7161 1205 7400 17751 14344 14344 1 21086 0 KDIDSFVPSK LTQVKGTGPDGRITKKDIDSFVPSKVAPAP GRITKKDIDSFVPSKVAPAPAAVVPPTGPG K K D S K V 0 0 0 2 0 0 0 0 0 1 0 2 0 1 1 2 0 0 0 1 0 0 10 1 1134.5921 P10515 P10515 387 396 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.028493 110.54 By matching By MS/MS 5 0 2 1 1 451890 393600 58283 7162 561 7401 17752;17753 14345 14345 1 3947.6 48945 KDILKDLVEMCR ITVGVVYVKSFPQSRKDILKDLVEMCRGVQ QSRKDILKDLVEMCRGVQHPLRGLFLRNYL R K D C R G 0 1 0 2 1 0 1 0 0 1 2 2 1 0 0 0 0 0 0 1 0 0 12 2 1518.7898 Q96QK1 Q96QK1 127 138 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.0067401 103.46 By MS/MS 5 0 1 1 949280 949280 0 7163 2217 7402 17754 14346 14346 1037 1 9520.8 0 KDISENKR RMVNHFIAEFKRKHKKDISENKRAVRRLRT EFKRKHKKDISENKRAVRRLRTACERAKRT K K D K R A 0 1 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 2 988.53016 P11142 P11142 251 258 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.1494E-08 180.87 By MS/MS 5 0 1 1 359390 359390 0 7164 572 7403 17755 14347 14347 1 3604.5 0 KDISQNKR RLVNHFVEEFKRKHKKDISQNKRAVRRLRT EFKRKHKKDISQNKRAVRRLRTACERAKRT K K D K R A 0 1 1 1 0 1 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 2 987.54614 P0DMV9;P0DMV8 P0DMV9 251 258 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.030207 130.22 By MS/MS 5 0 1 1 215590 215590 0 7165 550 7404 17756 14348 14348 1 2162.3 0 KDKDPVNK PKDDKKKKDAGKSAKKDKDPVNKSGGKAKK DAGKSAKKDKDPVNKSGGKAKKKKWSKGKV K K D N K S 0 0 1 2 0 0 0 0 0 0 0 3 0 0 1 0 0 0 0 1 0 0 8 2 942.51345 P62851 P62851 18 25 RPS25 40S ribosomal protein S25 yes yes 2 0.024702 133.58 By MS/MS 9.5 0.5 1 1 2 11317000 11317000 0 7166 1176 7405 17757;17758 14349 14349 1 320570 0 KDPSKNQGGGLSSSGAGEGQGPK SEKQNKPQKQNDGQRKDPSKNQGGGLSSSG GGLSSSGAGEGQGPKKQTRLGLEAKKEENL R K D P K K 1 0 1 1 0 2 1 7 0 0 1 3 0 0 2 4 0 0 0 0 0 0 23 2 2142.0301 P07814 P07814 987 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3;4 1.1207E-07 138.24 By MS/MS 3.8 0.748 2 2 1 5 4612400 4612400 0 7167 512 7406 17759;17760;17761;17762;17763 14350;14351;14352 14350 3 150910 0 KDQYFLDKK IDKEEVSLRRVIGAKKDQYFLDKKMVTKND RVIGAKKDQYFLDKKMVTKNDVMNLLESAG K K D K K M 0 0 0 2 0 1 0 0 0 0 1 3 0 1 0 0 0 0 1 0 0 0 9 2 1183.6237 Q9UQE7 Q9UQE7 106 114 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.019281 86.189 By MS/MS 3 0 1 1 624920 624920 0 7168 2807 7407 17764 14353 14353 1 11434 0 KDSETGENIR KLKEEISKMRELLARKDSETGENIRQAASS ELLARKDSETGENIRQAASSLQQASLKLFE R K D I R Q 0 1 1 1 0 0 2 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 10 1 1147.5469 P38646 P38646 625 634 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0030505 125.71 By MS/MS 6 1 1 1 2 1324700 1324700 0 7169 850 7408 17765;17766 14354;14355 14354 2 15234 0 KDSLLKPGLR ERRQQQQSGAWGAPRKDSLLKPGLRAVVGG WGAPRKDSLLKPGLRAVVGGAAAVSTQAMH R K D L R A 0 1 0 1 0 0 0 1 0 0 3 2 0 0 1 1 0 0 0 0 0 0 10 2 1125.687 O75427 O75427 430 439 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 3 0.011174 90.149 By MS/MS 5 0 1 1 1065900 1065900 0 7170 326 7409 17767 14356 14356 1 10690 0 KDSTSTPNNLPPSMMTR SSAHNPNKAEIPERRKDSTSTPNNLPPSMM STSTPNNLPPSMMTRRNTYVCTERPGAERP R K D T R R 0 1 2 1 0 0 0 0 0 0 1 1 2 0 3 3 3 0 0 0 0 0 17 1 1875.8819 Q96L34 Q96L34 492 508 MARK4 MAP/microtubule affinity-regulating kinase 4 yes yes 2 0.042201 50.467 By MS/MS 8 0 1 1 624630 624630 0 7171 2191 7410 17768 14357 14357 1027;1028 1 7885.9 0 KDVDGAYMTK INKRTNAENEFVTIKKDVDGAYMTKVDLQA FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K K D T K V 1 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 1 1 0 0 10 1 1126.5329 CON__P04264;P04264 P04264 289 298 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.9275E-08 201.84 By MS/MS By MS/MS 4.25 1.79 2 1 3 3 2 1 4 8 11923000 8269600 3653600 + 7172 471;45 7411;7412 17769;17770;17771;17772;17773;17774;17775;17776;17777;17778;17779;17780 14358;14359;14360;14361;14362;14363;14364 14358 26 7 757180 1349000 KDVDGAYMTKVDLQAK INKRTNAENEFVTIKKDVDGAYMTKVDLQA DVDGAYMTKVDLQAKLDNLQQEIDFLTALY K K D A K L 2 0 0 3 0 1 0 1 0 0 1 3 1 0 0 0 1 0 1 2 0 0 16 2 1780.9029 CON__P04264;P04264 P04264 289 304 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.00095576 132.15 By MS/MS 3 0 1 1 313160 0 313160 + 7173 471;45 7413 17781 14365 14365 1 0 39861 KDVDNAYMIK INKRTAAENDFVTLKKDVDNAYMIKVELQS FVTLKKDVDNAYMIKVELQSKVDLLNQEIE K K D I K V 1 0 1 2 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 10 1 1195.5907 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 287 296 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 8.7286E-06 179.1 By matching By MS/MS 3.5 0.5 2 2 1 3 1477200 695630 781590 + 7174 55 7414;7415 17782;17783;17784;17785 14366;14367 14367 45 2 65464 144210 KDVEVTKEEFAQSAIR MELVRKIYSTLAGTRKDVEVTKEEFAQSAI DVEVTKEEFAQSAIRYGQVTPLEIDILYQL R K D I R Y 2 1 0 1 0 1 3 0 0 1 0 2 0 1 0 1 1 0 0 2 0 0 16 2 1848.9581 O75746 O75746 244 259 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 3 0.00037065 132.25 By MS/MS 5 0 1 1 1864000 1864000 0 7175 344 7416 17786 14368 14368 1 18695 0 KDVEVTKEEFVLAAQK MELIRKIYSTLAGTRKDVEVTKEEFVLAAQ DVEVTKEEFVLAAQKFGQVTPMEVDILFQL R K D Q K F 2 0 0 1 0 1 3 0 0 0 1 3 0 1 0 0 1 0 0 3 0 0 16 2 1832.9884 Q9UJS0 Q9UJS0 245 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 3 5.9761E-11 231.13 By MS/MS 5.5 0.5 1 1 2 10769000 10769000 0 7176 2748 7417 17787;17788 14369 14369 1 106240 0 KDYNEAYNYYTK EAETFKEQGNAYYAKKDYNEAYNYYTKAID YAKKDYNEAYNYYTKAIDMCPKNASYYGNR K K D T K A 1 0 2 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 4 0 0 0 12 1 1570.694 Q99615 Q99615 42 53 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 1.1954E-17 263.29 By MS/MS 6 0 1 1 2453000 2453000 0 7177 2253 7418 17789 14370;14371 14371 2 16862 0 KEAADPLASKLNK QFQLSLLAAMGNTQRKEAADPLASKLNKVT QRKEAADPLASKLNKVTQLTGFSDPVYAEA R K E N K V 3 0 1 1 0 0 1 0 0 0 2 3 0 0 1 1 0 0 0 0 0 0 13 2 1383.7722 P53618 P53618 703 715 COPB1 Coatomer subunit beta yes yes 3 0.0009291 124.51 By MS/MS 4 0 1 1 622270 622270 0 7178 1033 7419 17790 14372 14372 1 58560 0 KEAAENSLVAYK DYHRYLAEFATGNDRKEAAENSLVAYKAAS NDRKEAAENSLVAYKAASDIAMTELPPTHP R K E Y K A 3 0 1 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 1 1 0 0 12 1 1321.6878 P62258 P62258 142 153 YWHAE 14-3-3 protein epsilon yes yes 2 4.6099E-06 199.19 By MS/MS 8 0 1 1 765000 765000 0 7179 1146 7420 17791 14373 14373 1 9658 0 KEAGGGGVGGPGAK ESDPFEVLKAAENKKKEAGGGGVGGPGAKS KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG K K E A K S 2 0 0 0 0 0 1 7 0 0 0 2 0 0 1 0 0 0 0 1 0 0 14 1 1140.5887 Q8NC51 Q8NC51 39 52 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.039111 89.805 By MS/MS 6 0 1 1 278870 278870 0 7180 1946 7421 17792 14374 14374 1 1917 0 KEALKDEANQK FKSGVKHLFNIISRKKEALKDEANQKDKGN ISRKKEALKDEANQKDKGNCKEDSLASYEL K K E Q K D 2 0 1 1 0 1 2 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 11 2 1272.6674 O94782 O94782 120 130 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 3 0.0028895 134.57 By MS/MS 7 0 1 1 453580 453580 0 7181 366 7422 17793 14375 14375 0 7120.4 0 KEAPPMEKPEVVK RRKQHSLLKRLRKAKKEAPPMEKPEVVKTH AKKEAPPMEKPEVVKTHLRDMIILPEMVGS K K E V K T 1 0 0 0 0 0 3 0 0 0 0 3 1 0 3 0 0 0 0 2 0 0 13 2 1480.796 P62841 P62841 65 77 RPS15 40S ribosomal protein S15 yes yes 3 0.0017305 134.61 By MS/MS 9.5 0.5 2 2 4 4887700 4887700 0 7182 1174 7423;7424 17794;17795;17796;17797 14376;14377 14376 677 2 109920 0 KEAVGDLLDAFK VSVPKRRRKIKELNKKEAVGDLLDAFKEAN LNKKEAVGDLLDAFKEANPAVPEVENQPPA K K E F K E 2 0 0 2 0 0 1 1 0 0 2 2 0 1 0 0 0 0 0 1 0 0 12 1 1304.6976 Q04637 Q04637 524 535 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0013064 138.63 By MS/MS 2 0 1 1 115790 115790 0 7183 1291 7425 17798 14378 14378 1 39164 0 KEDAENLAAAQR IQTIDNIVFFPATSKKEDAENLAAAQRDAV TSKKEDAENLAAAQRDAVDFDVRVDTQDQG K K E Q R D 4 1 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 1 1314.6528 Q9Y6D6 Q9Y6D6 1643 1654 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.0001584 184.36 By MS/MS 2 0 1 1 290980 290980 0 7184 2941 7426 17799 14379 14379 1 98420 0 KEDALLYQSK LNSTRGDADMYDLPKKEDALLYQSKGYNDD YDLPKKEDALLYQSKGYNDDYYEESYFTTR K K E S K G 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1193.6292 P50402 P50402 79 88 EMD Emerin yes yes 2 4.0828E-20 263.11 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 16347000 16300000 47182 7185 973 7427 17800;17801;17802;17803;17804 14380;14381;14382 14381 3 251110 84973 KEDDDKELQTASIFGSAK ATDNNCHVTLVIHPRKEDDDKELQTASIFG DDKELQTASIFGSAKASQEADNVLILQDRK R K E A K A 2 0 0 3 0 1 2 1 0 1 1 3 0 1 0 2 1 0 0 0 0 0 18 2 1980.964 Q96RR1 Q96RR1 561 578 PEO1 Twinkle protein, mitochondrial yes yes 3 0.0024829 102.84 By MS/MS 5 0 1 1 2955500 2955500 0 7186 2225 7428 17805 14383 14383 1 29642 0 KEDGVIK LNLDSLRPGKAALKKKEDGVIKELSIAMQL PGKAALKKKEDGVIKELSIAMQLLRNCLYQ K K E I K E 0 0 0 1 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 7 1 787.44397 Q86VV8 Q86VV8 1915 1921 RTTN Rotatin yes yes 1 0.052329 42.914 By MS/MS 6.5 1.12 1 1 1 1 4 21025000 21025000 0 7187 1833 7429 17806;17807;17808;17809 14384 14384 0 157190 0 KEDLISAFGTDDQTEICK THSVFVNVSKGQVAKKEDLISAFGTDDQTE LISAFGTDDQTEICKQILTKGEVQVSDKER K K E C K Q 1 0 0 3 1 1 2 1 0 2 1 2 0 1 0 1 2 0 0 0 0 0 18 1 2068.9623 Q9Y3A5 Q9Y3A5 68 85 SBDS Ribosome maturation protein SBDS yes yes 3 0.00046638 158.92 By MS/MS 8 0 1 1 1845200 1845200 0 7188 2862 7430 17810 14385 14385 1 23296 0 KEDLYLKPIQR GLKVRIMGPNYTPGKKEDLYLKPIQRTILM TPGKKEDLYLKPIQRTILMMGRYVEPIEDV K K E Q R T 0 1 0 1 0 1 1 0 0 1 2 2 0 0 1 0 0 0 1 0 0 0 11 2 1401.798 P13639 P13639 439 449 EEF2 Elongation factor 2 yes yes 2;3 4.4684E-05 161.51 By MS/MS 3.75 1.56 1 1 1 2 2 1 8 37955000 37955000 0 7189 602 7431 17811;17812;17813;17814;17815;17816;17817;17818 14386;14387;14388;14389 14387 4 2822200 0 KEEELQGALAR ELQAQIDELKLQLAKKEEELQGALARGDDE QLAKKEEELQGALARGDDETLHKNNALKVV K K E A R G 2 1 0 0 0 1 3 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 1 1242.6568 P35580 P35580 1088 1098 MYH10 Myosin-10 yes yes 2 1.226E-08 210.64 By MS/MS 2 0 1 1 289950 289950 0 7190 825 7432 17819 14390 14390 1 98072 0 KEEENASVIDSAELQAYPALVVEK DAYMTLADFCDQQLRKEEENASVIDSAELQ DSAELQAYPALVVEKMLKALKLNSNEARLK R K E E K M 4 0 1 1 0 1 5 0 0 1 2 2 0 0 1 2 0 0 1 3 0 0 24 1 2631.3279 P78527 P78527 3426 3449 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 4.6643E-05 101.41 By MS/MS 1 0 1 1 135540 135540 0 7191 1225 7433 17820 14391;14392 14391 2 32660 0 KEEEVQQQK EKERKKREERERKRRKEEEVQQQKLAEERR RERKRRKEEEVQQQKLAEERRRQNLQEEKE R K E Q K L 0 0 0 0 0 3 3 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 1 1144.5724 Q96CS3 Q96CS3 321 329 FAF2 FAS-associated factor 2 yes yes 2 0.0017018 146.79 By MS/MS 7 0 1 1 635750 635750 0 7192 2126 7434 17821 14393 14393 1 9980.2 0 KEELTLEGIR VTKKFMRDPIRILVKKEELTLEGIRQFYIN RILVKKEELTLEGIRQFYINVEREEWKLDT K K E I R Q 0 1 0 0 0 0 3 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 1 1186.6558 P60842 P60842 238 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 2.6354E-10 251.56 By MS/MS By matching 5.61 2.7 2 2 2 2 2 4 3 2 2 2 22 1 1148000000 1148000000 52327 7193 1097 7435 17822;17823;17824;17825;17826;17827;17828;17829;17830;17831;17832;17833;17834;17835;17836;17837;17838;17839;17840;17841;17842;17843;17844 14394;14395;14396;14397;14398;14399;14400;14401;14402;14403;14404;14405;14406;14407;14408;14409;14410;14411;14412;14413 14405 20 14265000 53620 KEELVAEQALK GLLWTCIMNAVEWNKKEELVAEQALKHLKQ EWNKKEELVAEQALKHLKQYAPLLAVFSSQ K K E L K H 2 0 0 0 0 1 3 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 11 1 1256.6976 Q9Y6E2 Q9Y6E2 310 320 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.0029411 124.39 By MS/MS 7 0 1 1 566770 566770 0 7194 2942 7436 17845 14414 14414 1 8897.3 0 KEESEESDDDMGFGLFD AGSAPAAAEEKKDEKKEESEESDDDMGFGL ESEESDDDMGFGLFD_______________ K K E F D - 0 0 0 4 0 0 4 2 0 0 1 1 1 2 0 2 0 0 0 0 0 0 17 1 1948.752 P05387;P05386 P05387 99 115 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 yes no 2 2.2834E-06 205.31 By MS/MS 9.5 0.5 2 2 4 1850400 1850400 0 7195 490 7437;7438 17846;17847;17848;17849 14415;14416;14417;14418 14415 195 4 78689 0 KEFSPFGSITSAK YIKNLDDTIDDEKLRKEFSPFGSITSAKVM LRKEFSPFGSITSAKVMLEDGRSKGFGFVC R K E A K V 1 0 0 0 0 0 1 1 0 1 0 2 0 2 1 3 1 0 0 0 0 0 13 1 1397.7191 Q13310 Q13310 312 324 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.021587 86.463 By MS/MS 5 0 1 1 879220 879220 0 7196 1369 7439 17850 14419 14419 0 8818.1 0 KEFSPFGTITSAK YVKNLDDGIDDERLRKEFSPFGTITSAKVM LRKEFSPFGTITSAKVMMEGGRSKGFGFVC R K E A K V 1 0 0 0 0 0 1 1 0 1 0 2 0 2 1 2 2 0 0 0 0 0 13 1 1411.7347 P11940 P11940 312 324 PABPC1 Polyadenylate-binding protein 1 yes yes 2;3 5.4416E-11 234.79 By MS/MS 5 0 2 2 13480000 13480000 0 7197 586 7440 17851;17852 14420;14421 14420 2 135190 0 KEGSDGPLATSKPVPAEK KPKEKAKNSKKKGAKKEGSDGPLATSKPVP SDGPLATSKPVPAEKSGLPVGPENGVELSK K K E E K S 2 0 0 1 0 0 2 2 0 0 1 3 0 0 3 2 1 0 0 1 0 0 18 2 1809.9472 P08240 P08240 174 191 SRPR Signal recognition particle receptor subunit alpha yes yes 3 0.00035083 124.45 By MS/MS 5 0 1 1 1070500 1070500 0 7198 522 7441 17853 14422 14422 1 10736 0 KEGTGSTATSSSSTAGAAGK ______________________________ STATSSSSTAGAAGKGKGKGGSGDSAVKQV R K E G K G 4 0 0 0 0 0 1 4 0 0 0 2 0 0 0 5 4 0 0 0 0 0 20 1 1754.8282 O15372 O15372 5 24 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2;3 4.0362E-46 325.33 By MS/MS By MS/MS 8.11 1.2 4 2 1 2 7 2 21297000 21160000 136200 7199 186 7442 17854;17855;17856;17857;17858;17859;17860;17861;17862 14423;14424;14425;14426;14427;14428;14429;14430 14426 8 363570 245290 KEIERLQK AALKKHHEEEIVHHKKEIERLQKEIERHKQ EEIVHHKKEIERLQKEIERHKQKIKMLKHD K K E Q K E 0 1 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 8 2 1042.6135 Q9UII2 Q9UII2 83 90 ATPIF1 ATPase inhibitor, mitochondrial yes yes 3 0.022574 92.47 By MS/MS 1 0 1 1 67401 67401 0 7200 2743 7443 17863 14431 14431 1 16241 0 KEIKDILIQYDR ALVAYYQKYVDEASKKEIKDILIQYDRTLL ASKKEIKDILIQYDRTLLVADPRRCESKKF K K E D R T 0 1 0 2 0 1 1 0 0 3 1 2 0 0 0 0 0 0 1 0 0 0 12 2 1532.8562 P62249 P62249 106 117 RPS16 40S ribosomal protein S16 yes yes 3 0.00023179 145.81 By MS/MS 10 0 1 1 481010 481010 0 7201 1145 7444 17864 14432 14432 1 25924 0 KENQWCEEK NIKNDFTEEEEAQVRKENQWCEEK______ EEAQVRKENQWCEEK_______________ R K E E K - 0 0 1 0 1 1 3 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 9 1 1249.5397 P63208 P63208 155 163 SKP1 S-phase kinase-associated protein 1 yes yes 2 4.5192E-05 178.55 By MS/MS 9.5 0.5 1 1 2 710220 710220 0 7202 1198 7445 17865;17866 14433;14434 14433 2 25650 0 KENSSVEAK MDGKESKGSPVFLPRKENSSVEAKDSGLES PVFLPRKENSSVEAKDSGLESKKLPRSVKL R K E A K D 1 0 1 0 0 0 2 0 0 0 0 2 0 0 0 2 0 0 0 1 0 0 9 1 990.49819 Q9NYV4 Q9NYV4 430 438 CDK12 Cyclin-dependent kinase 12 yes yes 2 0.041573 96.668 By MS/MS 2 0 1 1 28719 28719 0 7203 2639 7446 17867 14435 14435 1 9714 0 KENVATTDTLESTTVGTSV IKEVLLFPAMKPEDKKENVATTDTLESTTV ATTDTLESTTVGTSV_______________ K K E S V - 1 0 1 1 0 0 2 1 0 0 1 1 0 0 0 2 6 0 0 3 0 0 19 1 1951.9586 Q15046 Q15046 579 597 KARS Lysine--tRNA ligase yes yes 2 4.4734E-24 272.74 By MS/MS 5 0 1 1 3437600 3437600 0 7204 1481 7447 17868 14436 14436 1 34478 0 KEPPKEETAQLTGPEAGR PGSDEVAKIQTPPPKKEPPKEETAQLTGPE PKEETAQLTGPEAGRKPARGVGSGGQGPPP K K E G R K 2 1 0 0 0 1 4 2 0 0 1 2 0 0 3 0 2 0 0 0 0 0 18 2 1936.9854 P48634 P48634 883 900 PRRC2A Protein PRRC2A yes yes 3 0.0024524 103.01 By MS/MS 2 0 1 1 220500 220500 0 7205 938 7448 17869 14437 14437 1 74582 0 KEQIPLKPK HLLWKKRSILRFLERKEQIPLKPKEKRERD LRFLERKEQIPLKPKEKRERDSNVLSVIIK R K E P K E 0 0 0 0 0 1 1 0 0 1 1 3 0 0 2 0 0 0 0 0 0 0 9 2 1079.6703 P46199 P46199 498 506 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 3 0.0019411 117.81 By MS/MS 5 0 1 1 1244100 1244100 0 7206 910 7449 17870 14438 14438 1 12477 0 KERLESLNIQR EHQRILARRQTIEERKERLESLNIQREKEE IEERKERLESLNIQREKEELEQREAELQKV R K E Q R E 0 2 1 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 11 2 1384.7787 Q14152 Q14152 579 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0041748 125.74 By MS/MS 3.5 1.12 1 1 1 1 4 3950400 3950400 0 7207 1422 7450 17871;17872;17873;17874 14439 14439 1 125210 0 KESNLETELK CLKGEMEDDKSKMEKKESNLETELKSQTAR SKMEKKESNLETELKSQTARIMELEDHITQ K K E L K S 0 0 1 0 0 0 3 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 10 1 1189.619 Q13439 Q13439 1512 1521 GOLGA4 Golgin subfamily A member 4 yes yes 3 0.037074 81.525 By MS/MS 6 0 1 1 539180 539180 0 7208 1385 7451 17875 14440 14440 0 3706.5 0 KESYSVYVYK TKAQKKDGKKRKRSRKESYSVYVYKVLKQV RKRSRKESYSVYVYKVLKQVHPDTGISSKA R K E Y K V 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 3 2 0 0 10 1 1264.634 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053 Q99880 35 44 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S yes no 2 5.5291E-07 185.6 By MS/MS 10 0 1 1 1465800 1465800 0 7209 279 7452 17876 14441 14441 1 78999 0 KEYEEDGAR ILASLDTFKKMWVSKKEYEEDGARSIHRKT KMWVSKKEYEEDGARSIHRKTF________ K K E A R S 1 1 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 9 1 1095.4833 P61163 P61163 361 369 ACTR1A Alpha-centractin yes yes 2 1.7756E-08 182.76 By MS/MS 7 0 1 1 0 0 0 7210 1113 7453 17877 14442 14442 1 0 0 KEYEQELSDDLHVER RRARLRKREAQLQSRKEYEQELSDDLHVER KEYEQELSDDLHVERYRQFWTRTKK_____ R K E E R Y 0 1 0 2 0 1 4 0 1 0 2 1 0 0 0 1 0 0 1 1 0 0 15 1 1888.8803 Q7Z7F7 Q7Z7F7 104 118 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 3 0.00031614 203.05 By MS/MS 10 0 1 1 1170400 1170400 0 7211 1805 7454 17878 14443 14443 1 63078 0 KFAEAFEAIPR SYGETCPGLEQYAIKKFAEAFEAIPRALAE YAIKKFAEAFEAIPRALAENSGVKANEVIS K K F P R A 3 1 0 0 0 0 2 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 11 1 1277.6768 P50990 P50990 440 450 CCT8 T-complex protein 1 subunit theta yes yes 2;3 1.4268E-08 208.15 By MS/MS 6.8 0.748 2 2 1 5 17841000 17841000 0 7212 984 7455 17879;17880;17881;17882;17883 14444;14445 14444 2 131530 0 KFAETQPK GEVKLCEKMAQFDAKKFAETQPKKDTPRKE MAQFDAKKFAETQPKKDTPRKEKGSREEKQ K K F P K K 1 0 0 0 0 1 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 0 8 1 947.50763 P26641 P26641 220 227 EEF1G Elongation factor 1-gamma yes yes 2 0.012241 132.08 By MS/MS 6.5 0.5 1 1 2 15343000 15343000 0 7213 736 7456 17884;17885 14446 14446 1 140690 0 KFDGVEGPR RGGTRTHFDYQFGYRKFDGVEGPRTPKYMN YQFGYRKFDGVEGPRTPKYMNNITYYFDNV R K F P R T 0 1 0 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 1 0 0 9 1 1003.5087 Q6PKG0 Q6PKG0 367 375 LARP1 La-related protein 1 yes yes 2 0.022059 106.68 By MS/MS 3.5 0.5 1 1 2 2389000 2389000 0 7214 1722 7457 17886;17887 14447 14447 1 82428 0 KFDQLLAEEK DHQRQSACNLEKKQKKFDQLLAEEKTISAK EKKQKKFDQLLAEEKTISAKYAEERDRAEA K K F E K T 1 0 0 1 0 1 2 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 10 1 1219.6449 P35580;P35579;Q7Z406 P35579 1445 1454 MYH10;MYH9;MYH14 Myosin-10;Myosin-9;Myosin-14 no no 2 7.707E-10 204.52 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 5748900 5605500 143460 7215 824;825;1788 7458 17888;17889;17890 14448;14449;14450 14449 3 1699600 202880 KFEEETVK ETGKKDQSKQKESQRKFEEETVKSKVTVDT KQKESQRKFEEETVKSKVTVDTGVIPASEE R K F V K S 0 0 0 0 0 0 3 0 0 0 0 2 0 1 0 0 1 0 0 1 0 0 8 1 1008.5128 O60841 O60841 275 282 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 0.0029868 154.12 By MS/MS 2.5 0.5 1 1 2 1921000 1921000 0 7216 283 7459 17891;17892 14451 14451 1 284070 0 KFEEETVKSK ETGKKDQSKQKESQRKFEEETVKSKVTVDT KESQRKFEEETVKSKVTVDTGVIPASEEKA R K F S K V 0 0 0 0 0 0 3 0 0 0 0 3 0 1 0 1 1 0 0 1 0 0 10 2 1223.6398 O60841 O60841 275 284 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 0.0018666 117.71 By MS/MS 3 0 1 1 0 0 0 7217 283 7460 17893 14452 14452 1 0 0 KFEEIPIAHIK PPIPGEESSLRWAGKKFEEIPIAHIKASHN WAGKKFEEIPIAHIKASHNNTQIQVVSASN K K F I K A 1 0 0 0 0 0 2 0 1 3 0 2 0 1 1 0 0 0 0 0 0 0 11 1 1323.7551 P82912 P82912 79 89 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 0.0035855 120.63 By MS/MS 9.5 0.5 2 2 4 4132700 4132700 0 7218 1234 7461 17894;17895;17896;17897 14453;14454 14454 2 150610 0 KFEQLKQER GRAQKKVERQAELKRKFEQLKQERISRYQG QAELKRKFEQLKQERISRYQGVNLYIKNLD R K F E R I 0 1 0 0 0 2 2 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 9 2 1204.6564 Q13310 Q13310 279 287 PABPC4 Polyadenylate-binding protein 4 yes yes 3 0.037948 101.65 By MS/MS 5.5 0.5 1 1 2 5879400 5879400 0 7219 1369 7462 17898;17899 14455 14455 1 57562 0 KFEQMKQDR GRAQKKVERQTELKRKFEQMKQDRITRYQG QTELKRKFEQMKQDRITRYQGVNLYVKNLD R K F D R I 0 1 0 1 0 2 1 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 2 1208.5972 P11940 P11940 279 287 PABPC1 Polyadenylate-binding protein 1 yes yes 2 0.0033045 148.69 By MS/MS 5 0 1 1 264530 264530 0 7220 586 7463 17900 14456 14456 1 2653.1 0 KFIEDRVK YKSAEEREKLVKAERKFIEDRVKKIIELKR KLVKAERKFIEDRVKKIIELKRKVCGDSDK R K F V K K 0 1 0 1 0 0 1 0 0 1 0 2 0 1 0 0 0 0 0 1 0 0 8 2 1033.592 P40227 P40227 265 272 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.043184 82.241 By MS/MS 6 0 1 1 1493800 1493800 0 7221 858 7464 17901 14457 14457 1 10269 0 KFLDGIYVSEK ALIQQATTVKNKDIRKFLDGIYVSEKGTVQ KDIRKFLDGIYVSEKGTVQQADE_______ R K F E K G 0 0 0 1 0 0 1 1 0 1 1 2 0 1 0 1 0 0 1 1 0 0 11 1 1297.6918 P32969 P32969 174 184 RPL9 60S ribosomal protein L9 yes yes 2 0.00010016 158.08 By MS/MS 9 0 1 1 1815800 1815800 0 7222 798 7465 17902 14458 14458 1 35735 0 KFNALKVPVPEDK KANVAKAGLVDDFEKKFNALKVPVPEDKYT EKKFNALKVPVPEDKYTAQVDAEEKEDVKS K K F D K Y 1 0 1 1 0 0 1 0 0 0 1 3 0 1 2 0 0 0 0 2 0 0 13 2 1483.8399 O75947 O75947 73 85 ATP5H ATP synthase subunit d, mitochondrial yes yes 3 0.0010715 164.81 By MS/MS 9 0 1 1 2219100 2219100 0 7223 356 7466 17903 14459;14460 14460 2 43672 0 KFNDPNDPCK IYGSLPPGTKLAQAKKFNDPNDPCKILVAT LAQAKKFNDPNDPCKILVATDAIGMGLNLS K K F C K I 0 0 2 2 1 0 0 0 0 0 0 2 0 1 2 0 0 0 0 0 0 0 10 1 1233.5448 Q8IYB8 Q8IYB8 410 419 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.0020061 131.62 By MS/MS 5 0 1 1 867670 867670 0 7224 1885 7467 17904 14461 14461 1 8702.3 0 KFPHLAEAQK RKENLERKKAKILLKKFPHLAEAQKSSLV_ KILLKKFPHLAEAQKSSLV___________ K K F Q K S 2 0 0 0 0 1 1 0 1 0 1 2 0 1 1 0 0 0 0 0 0 0 10 1 1167.64 Q9HD33 Q9HD33 237 246 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 3 0.0045195 101.97 By MS/MS 9 0 1 1 457960 457960 0 7225 2518 7468 17905 14462 14462 1 9012.8 0 KFVADGIFK ______________________________ QISKKRKFVADGIFKAELNEFLTRELAEDG R K F F K A 1 0 0 1 0 0 0 1 0 1 0 2 0 2 0 0 0 0 0 1 0 0 9 1 1023.5753 P23396 P23396 10 18 RPS3 40S ribosomal protein S3 yes yes 2 0.027261 104.01 By MS/MS 8 0 1 1 1578900 1578900 0 7226 703 7469 17906 14463 14463 1 19933 0 KFYGPEGPYGVFAGR LMAINGKVFDVTKGRKFYGPEGPYGVFAGR KFYGPEGPYGVFAGRDASRGLATFCLDKEA R K F G R D 1 1 0 0 0 0 1 4 0 0 0 1 0 2 2 0 0 0 2 1 0 0 15 1 1643.8096 O00264 O00264 105 119 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.0041219 100.54 By MS/MS 8.5 0.5 1 1 2 1001600 1001600 0 7227 96 7470 17907;17908 14464 14464 1 14375 0 KGAAYGLAGLVK RLMQQLLESDKYAERKGAAYGLAGLVKGLG AERKGAAYGLAGLVKGLGILSLKQQEMMAA R K G V K G 3 0 0 0 0 0 0 3 0 0 2 2 0 0 0 0 0 0 1 1 0 0 12 1 1146.6761 Q92616 Q92616 1395 1406 GCN1L1 Translational activator GCN1 yes yes 2 0.011403 108.43 By MS/MS 2 0 1 1 508220 508220 0 7228 2064 7471 17909 14465 14465 1 171900 0 KGAYDIFLNAK DFQKDILIACRLNQKKGAYDIFLNAKEQNI LNQKKGAYDIFLNAKEQNIVFNAETYSNLI K K G A K E 2 0 1 1 0 0 0 1 0 1 1 2 0 1 0 0 0 0 1 0 0 0 11 1 1238.6659 P42704 P42704 1049 1059 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.3472E-13 246.86 By MS/MS By matching 3.75 0.829 2 1 1 3 1 3608300 3546400 61899 7229 886 7472 17910;17911;17912;17913 14466;14467 14466 2 152720 7878.8 KGDECELLGHSK RGTVVTGTLERGILKKGDECELLGHSKNIR ILKKGDECELLGHSKNIRTVVTGIEMFHKS K K G S K N 0 0 0 1 1 0 2 2 1 0 2 2 0 0 0 1 0 0 0 0 0 0 12 1 1371.6453 P49411 P49411 286 297 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 3.0255E-12 232.56 By MS/MS 7.33 0.943 1 3 1 1 6 59516000 59516000 0 7230 949 7473 17914;17915;17916;17917;17918;17919 14468;14469;14470;14471;14472 14470 5 904470 0 KGDEVDGVDEVAK ALKKQLPGVKSEGKRKGDEVDGVDEVAKKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK R K G A K K 1 0 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 13 1 1359.6518 P09874 P09874 209 221 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0011896 178.95 By MS/MS 4 0 1 1 541800 541800 0 7231 543 7474 17920 14473 14473 1 50987 0 KGDEYIINGQK GAGSDVAGIKTKAEKKGDEYIINGQKMWIT KAEKKGDEYIINGQKMWITNGGKANWYFLL K K G Q K M 0 0 1 1 0 1 1 2 0 2 0 2 0 0 0 0 0 0 1 0 0 0 11 1 1263.6459 P11310 P11310 179 189 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 4.9095E-07 201.61 By MS/MS 7 0 1 1 834010 834010 0 7232 577 7475 17921 14474 14474 1 13093 0 KGDIFLVR VYLKPYFLEAYRPIRKGDIFLVRGGMRAVE EAYRPIRKGDIFLVRGGMRAVEFKVVETDP R K G V R G 0 1 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 1 946.56 P55072 P55072 148 155 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00062379 171.53 By MS/MS 4.5 0.5 1 1 2 18547000 18547000 0 7233 1054 7476 17922;17923 14475;14476 14475 2 1514600 0 KGDIIQLQR HEELMLGDPCLKDLKKGDIIQLQRRGFFIC CLKDLKKGDIIQLQRRGFFICDQPYEPVSP K K G Q R R 0 1 0 1 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1069.6244 P07814 P07814 666 674 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 1.7249E-05 204.42 By MS/MS 3.33 0.471 2 1 3 18343000 18343000 0 7234 512 7477 17924;17925;17926 14477;14478 14477 2 391090 0 KGDLLLNR NRPDSKNWQYQETIKKGDLLLNRVQKLSRV QYQETIKKGDLLLNRVQKLSRVINM_____ K K G N R V 0 1 1 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 1 927.55016 Q15008 Q15008 372 379 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.024491 115.49 By MS/MS 6.5 0.5 1 1 2 5901500 5901500 0 7235 1471 7478 17927;17928 14479 14479 1 85966 0 KGDTIYNTR FGQLTYVRSYQGELKKGDTIYNTRTRKKVR YQGELKKGDTIYNTRTRKKVRLQRLARMHA K K G T R T 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 0 1 0 0 0 9 1 1066.5407 Q96RP9 Q96RP9 380 388 GFM1 Elongation factor G, mitochondrial yes yes 2 2.7969E-06 183.72 By MS/MS 6 0.816 1 1 1 3 5243100 5243100 0 7236 2223 7479 17929;17930;17931 14480 14480 1 50841 0 KGEDVLGSVR PALSAALYYLVVQGKKGEDVLGSVRRALTH VVQGKKGEDVLGSVRRALTHIDHSLSRQNC K K G V R R 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 2 0 0 10 1 1058.572 P56192 P56192 109 118 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0044672 117.71 By MS/MS 3.4 2.06 1 1 1 1 1 5 11676000 11676000 0 7237 1067 7480 17932;17933;17934;17935;17936 14481 14481 1 1222300 0 KGEEALFTTR KAVDCLLDSKWAKAKKGEEALFTTRESVVD WAKAKKGEEALFTTRESVVDYCNRLLKKQF K K G T R E 1 1 0 0 0 0 2 1 0 0 1 1 0 1 0 0 2 0 0 0 0 0 10 1 1150.5982 Q99442 Q99442 66 75 SEC62 Translocation protein SEC62 yes yes 2 0.0034397 123.51 By MS/MS 6.5 0.5 1 1 2 4217700 4217700 0 7238 2244 7481 17937;17938 14482 14482 1 31948 0 KGEFQEVVR GFTPDVKVWEVCFGKKGEFQEVVRAFELKG EVCFGKKGEFQEVVRAFELKGHSAAVHSFA K K G V R A 0 1 0 0 0 1 2 1 0 0 0 1 0 1 0 0 0 0 0 2 0 0 9 1 1090.5771 Q9Y4P3 Q9Y4P3 263 271 TBL2 Transducin beta-like protein 2 yes yes 2 0.034602 100.25 By MS/MS 7 0 1 1 1222700 1222700 0 7239 2899 7482 17939 14483 14483 1 19194 0 KGEGLPNFDNNNIK ISRDKITRPGAKLWKKGEGLPNFDNNNIKG KKGEGLPNFDNNNIKGSLIITFDVDFPKEQ K K G I K G 0 0 4 1 0 0 1 2 0 1 1 2 0 1 1 0 0 0 0 0 0 0 14 1 1558.774 Q9UBS4 Q9UBS4 302 315 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2;3 0.0015616 148.78 By MS/MS 7 0 2 2 3519500 3519500 0 7240 2704 7483 17940;17941 14484;14485 14484 2 55250 0 KGEIFELK ______________________________ KYFTTTKKGEIFELKAELNSDKKEKKKEAV K K G L K A 0 0 0 0 0 0 2 1 0 1 1 2 0 1 0 0 0 0 0 0 0 0 8 1 962.54368 Q10567 Q10567 12 19 AP1B1 AP-1 complex subunit beta-1 no no 2 0.045734 107.01 By MS/MS 4 0 1 1 827710 827710 0 7241 1322 7484 17942 14486 14486 1 77893 0 KGEITGEVR TSLRPFDLVIPFTIKKGEITGEVRMPSGKV IPFTIKKGEITGEVRMPSGKVAQPTITDNK K K G V R M 0 1 0 0 0 0 2 2 0 1 0 1 0 0 0 0 1 0 0 1 0 0 9 1 987.53491 P21333 P21333 1801 1809 FLNA Filamin-A yes yes 2 0.0023647 140.83 By MS/MS 2 0.816 1 1 1 3 2616500 2616500 0 7242 677 7485 17943;17944;17945 14487;14488 14487 2 677150 0 KGEKDIPGLTDTTVPR IVDANLSVLNLVIVKKGEKDIPGLTDTTVP GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K K G P R R 0 1 0 2 0 0 1 2 0 1 1 2 0 0 2 0 3 0 0 1 0 0 16 2 1725.9261 P62753 P62753 116 131 RPS6 40S ribosomal protein S6 yes yes 2;3 4.5761E-10 233.52 By MS/MS 8.4 1.02 1 2 1 1 5 33292000 33292000 0 7243 1169 7486 17946;17947;17948;17949;17950 14489;14490 14490 2 431110 0 KGELTVFTGPTGSGK WSRFPDLNRILKGHRKGELTVFTGPTGSGK KGELTVFTGPTGSGKTTFISEYALDLCSQG R K G G K T 0 0 0 0 0 0 1 4 0 0 1 2 0 1 1 1 3 0 0 1 0 0 15 1 1477.7777 Q96RR1 Q96RR1 407 421 PEO1 Twinkle protein, mitochondrial yes yes 2 0.025728 96.707 By MS/MS 5 0 1 1 0 0 0 7244 2225 7487 17951 14491 14491 1 0 0 KGESQTDIEITR KNPRIVLLDSSLEYKKGESQTDIEITREED EYKKGESQTDIEITREEDFTRILQMEEEYI K K G T R E 0 1 0 1 0 1 2 1 0 2 0 1 0 0 0 1 2 0 0 0 0 0 12 1 1375.6943 P49368 P49368 249 260 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 3.8339E-05 179.6 By MS/MS 6 0.632 1 3 1 5 10106000 10106000 0 7245 947 7488 17952;17953;17954;17955;17956 14492;14493;14494;14495 14492 4 83171 0 KGESQTDIEITREEDFTR KNPRIVLLDSSLEYKKGESQTDIEITREED SQTDIEITREEDFTRILQMEEEYIQQLCED K K G T R I 0 2 0 2 0 1 4 1 0 2 0 1 0 1 0 1 3 0 0 0 0 0 18 2 2153.0237 P49368 P49368 249 266 CCT3 T-complex protein 1 subunit gamma yes yes 2;3;4 1.924E-16 249.39 By MS/MS 6.2 0.98 3 3 3 1 10 206770000 206770000 0 7246 947 7489 17957;17958;17959;17960;17961;17962;17963;17964;17965;17966 14496;14497;14498;14499;14500;14501;14502 14500 7 1852000 0 KGFDQEEVFEKPTR FRSVFYRSYKEQESKKGFDQEEVFEKPTRE KKGFDQEEVFEKPTRETCQGMRHAIYDKLD K K G T R E 0 1 0 1 0 1 3 1 0 0 0 2 0 2 1 0 1 0 0 1 0 0 14 2 1708.842 P30876 P30876 821 834 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.00053762 131.86 By MS/MS 3.5 0.5 1 1 2 1275200 1275200 0 7247 781 7490 17967;17968 14503 14503 1 75646 0 KGHAVGDIPGVR FIEENDEVLVAGFGRKGHAVGDIPGVRFKV FGRKGHAVGDIPGVRFKVVKVANVSLLALY R K G V R F 1 1 0 1 0 0 0 3 1 1 0 1 0 0 1 0 0 0 0 2 0 0 12 1 1204.6677 P62266 P62266 108 119 RPS23 40S ribosomal protein S23 yes yes 2;3 0.0079745 107.11 By MS/MS 9.5 0.5 2 2 4 19087000 19087000 0 7248 1148 7491 17969;17970;17971;17972 14504;14505;14506;14507;14508 14506 5 648180 0 KGHEENGDVVTEPQVAEK AAKKKEAAKARQRPRKGHEENGDVVTEPQV EENGDVVTEPQVAEKNEANGRETTEVDLLT R K G E K N 1 0 1 1 0 1 4 2 1 0 0 2 0 0 1 0 1 0 0 3 0 0 18 1 1964.9439 Q9UG63 Q9UG63 25 42 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 3 0.033348 65.949 By MS/MS 5 0 1 1 452470 452470 0 7249 2719 7492 17973 14509 14509 0 4538.1 0 KGIQFLQEK KLLITGTEQFNQKPKKGIQFLQEKGLLTIP FNQKPKKGIQFLQEKGLLTIPMDNTEVAQW K K G E K G 0 0 0 0 0 2 1 1 0 1 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1089.6182 Q92538 Q92538 716 724 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0055138 126.24 By MS/MS 2 0 1 1 1113400 1113400 0 7250 2050 7493 17974 14510 14510 1 376610 0 KGLDPYNVLAPK EQATGLEREIMLAAKKGLDPYNVLAPKGAS AAKKGLDPYNVLAPKGASGTREDPNLVPSI K K G P K G 1 0 1 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 1 1 0 0 12 1 1313.7343 P10606 P10606 57 68 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2 0.0014673 135.8 By MS/MS 10 0 1 1 1617400 1617400 0 7251 564 7494 17975 14511 14511 1 87174 0 KGLSEDVSISK APHLAREFMIKTRRRKGLSEDVSISKFFDD TRRRKGLSEDVSISKFFDDPMLLELAKQDV R K G S K F 0 0 0 1 0 0 1 1 0 1 1 2 0 0 0 3 0 0 0 1 0 0 11 1 1161.6241 Q15029 Q15029 941 951 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.011367 108.35 By MS/MS 4 0.816 1 1 1 3 930080 930080 0 7252 1476 7495 17976;17977;17978 14512 14512 1 54833 0 KGLTPSQIGVILR LTSDDVKEQIYKLAKKGLTPSQIGVILRDS AKKGLTPSQIGVILRDSHGVAQVRFVTGNK K K G L R D 0 1 0 0 0 1 0 2 0 2 2 1 0 0 1 1 1 0 0 1 0 0 13 1 1380.8453 P62277 P62277 43 55 RPS13 40S ribosomal protein S13 yes yes 2;3 9.454E-06 193.62 By MS/MS 9.5 0.5 2 2 4 5398000 5398000 0 7253 1151 7496 17979;17980;17981;17982 14513;14514;14515;14516 14516 3 166350 0 KGNYAER AGLQFPVGRVHRLLRKGNYAERVGAGAPVY GRVHRLLRKGNYAERVGAGAPVYLAAVLEY R K G E R V 1 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 7 1 836.41407 Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P0C0S8;Q93077;Q96QV6;Q8IUE6 Q99878 37 43 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AC;HIST1H2AA;HIST2H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 1-A;Histone H2A type 2-B yes no 2 0.04685 125.81 By MS/MS 10 0 1 1 917060 917060 0 7254 546 7497 17983 14517 14517 1 49426 0 KGPAAIQK ANNDLENKIQDWYDKKGPAAIQKNYSPYYN IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ K K G Q K N 2 0 0 0 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 0 0 8 1 811.49159 P35527;CON__P35527 P35527 192 199 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0012114 162.51 By MS/MS By MS/MS 5.35 2.91 2 2 1 2 2 2 1 2 1 2 8 9 18468000 11301000 7167000 + 7255 822 7498 17984;17985;17986;17987;17988;17989;17990;17991;17992;17993;17994;17995;17996;17997;17998;17999;18000 14518;14519;14520;14521;14522;14523;14524;14525;14526;14527;14528;14529;14530;14531 14529 14 894410 4186200 KGPEADSEWR KDSRWGDRDSEGTWRKGPEADSEWRRGPPE EGTWRKGPEADSEWRRGPPEKEWRRGEGRD R K G W R R 1 1 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 10 1 1173.5415 Q14152 Q14152 901 910 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0038206 121.36 By MS/MS 3.5 0.5 1 1 2 13485000 13485000 0 7256 1422 7499 18001;18002 14532;14533 14532 2 305310 0 KGPEADSEWRR KDSRWGDRDSEGTWRKGPEADSEWRRGPPE GTWRKGPEADSEWRRGPPEKEWRRGEGRDE R K G R R G 1 2 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 11 2 1329.6426 Q14152 Q14152 901 911 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.010151 114.86 By MS/MS 3 0 1 1 662500 662500 0 7257 1422 7500 18003 14534 14534 1 12122 0 KGQASLYGK PPPPTPTESRKKSGKKGQASLYGKRRSQKE RKKSGKKGQASLYGKRRSQKEEDEQEDLTK K K G G K R 1 0 0 0 0 1 0 2 0 0 1 2 0 0 0 1 0 0 1 0 0 0 9 1 950.51853 Q92922 Q92922 346 354 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.0077847 117.81 By MS/MS 3 0 1 1 361110 361110 0 7258 2079 7501 18004 14535 14535 1 6607.3 0 KGQAVDYEGSRTQEEIVAK SRFDVSGYPTIKILKKGQAVDYEGSRTQEE VDYEGSRTQEEIVAKVREVSQPDWTPPPEV K K G A K V 2 1 0 1 0 2 3 2 0 1 0 2 0 0 0 1 1 0 1 2 0 0 19 2 2107.0546 P13667 P13667 145 163 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.013494 78.234 By MS/MS 5 0 1 1 788880 788880 0 7259 604 7502 18005 14536 14536 1 7912.1 0 KGQENLKK RAELQAQIAFLQGERKGQENLKKDLVRRIK AFLQGERKGQENLKKDLVRRIKMLEYALKQ R K G K K D 0 0 1 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 0 8 2 943.54508 O43815;Q13033 O43815 89 96 STRN;STRN3 Striatin;Striatin-3 no no 3 0.017842 98.629 By MS/MS 4.5 0.5 1 1 2 179490 179490 0 7260 237;1346 7503 18006;18007 14537 14537 1 15260 0 KGQGGAGAGDDEEED YGGGRPGRVKRKNAKKGQGGAGAGDDEEED KGQGGAGAGDDEEED_______________ K K G E D - 2 0 0 3 0 1 3 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 15 1 1433.5543 P46781 P46781 180 194 RPS9 40S ribosomal protein S9 yes yes 2 3.2579E-07 236.22 By MS/MS By MS/MS 9.5 0.5 2 2 3 1 55372000 55314000 58475 7261 918 7504 18008;18009;18010;18011 14538;14539;14540;14541 14539 4 1121700 133340 KGQSEEIQK PRQINWTVLYRRKHKKGQSEEIQKKRTRRA YRRKHKKGQSEEIQKKRTRRAVKFQRAITG K K G Q K K 0 0 0 0 0 2 2 1 0 1 0 2 0 0 0 1 0 0 0 0 0 0 9 1 1045.5404 P83731 P83731 61 69 RPL24 60S ribosomal protein L24 yes yes 2 0.0020918 143.28 By MS/MS 9 0 1 1 3577100 3577100 0 7262 1241 7505 18012 14542 14542 1 70397 0 KGSEASAASR EKEPGEQASVPLSPKKGSEASAASRQSDTS PLSPKKGSEASAASRQSDTSGPVTTSKSSS K K G S R Q 3 1 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 10 1 962.47812 P42858 P42858 1202 1211 HTT Huntingtin yes yes 2 0.02892 97.813 By MS/MS 2 0 1 1 30532 30532 0 7263 890 7506 18013 14543 14543 1 10327 0 KGSEQESVKEFLAK ______________________________ KKGSEQESVKEFLAKAKEDFLKKWESPAQN K K G A K A 1 0 0 0 0 1 3 1 0 0 1 3 0 1 0 2 0 0 0 1 0 0 14 2 1578.8253 P17612 P17612 9 22 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 3 0.003234 107.39 By MS/MS 7 0 1 1 2753500 2753500 0 7264 644 7507 18014 14544 14544 1 43226 0 KGSEVESVKEFLAK ______________________________ KKGSEVESVKEFLAKAKEDFLKKWENPTQN K K G A K A 1 0 0 0 0 0 3 1 0 0 1 3 0 1 0 2 0 0 0 2 0 0 14 2 1549.8352 P22694 P22694 9 22 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes yes 3 0.00041394 156.2 By MS/MS 7 0 1 1 787950 787950 0 7265 695 7508 18015 14545 14545 1 12369 0 KGSLESPATDVFGSTEEGEKR MRWSTLVEDYGMELRKGSLESPATDVFGST PATDVFGSTEEGEKRWKDLKNRVVEHNIRI R K G K R W 1 1 0 1 0 0 4 3 0 0 1 2 0 1 1 3 2 0 0 1 0 0 21 2 2223.0655 O00232 O00232 330 350 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 1.7261E-08 205.55 By MS/MS 6 0 1 1 6166800 6166800 0 7266 94 7509 18016 14546 14546 1 42392 0 KGSTAVGVR DGHLFQVEYAQEAVKKGSTAVGVRGRDIVV AQEAVKKGSTAVGVRGRDIVVLGVEKKSVA K K G V R G 1 1 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 2 0 0 9 1 873.50321 O14818 O14818 28 36 PSMA7 Proteasome subunit alpha type-7 yes yes 2 0.0055138 126.24 By MS/MS 8 0 1 1 1683100 1683100 0 7267 140 7510 18017 14547 14547 1 21249 0 KGTDIMYTGTLDCWR PFDTVRRRMMMQSGRKGTDIMYTGTLDCWR KGTDIMYTGTLDCWRKIARDEGGKAFFKGA R K G W R K 0 1 0 2 1 0 0 2 0 1 1 1 1 0 0 0 3 1 1 0 0 0 15 1 1815.8284 P05141 P05141 245 259 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 9.1955E-11 246.63 By MS/MS 8 0 4 4 7755400 7755400 0 7268 487 7511;7512 18018;18019;18020;18021 14548;14549;14550;14551 14549 189 4 97911 0 KGTDIMYTGTLDCWRK PFDTVRRRMMMQSGRKGTDIMYTGTLDCWR GTDIMYTGTLDCWRKIARDEGGKAFFKGAW R K G R K I 0 1 0 2 1 0 0 2 0 1 1 2 1 0 0 0 3 1 1 0 0 0 16 2 1943.9234 P05141 P05141 245 260 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.00074356 155.26 By MS/MS 8 0 1 1 2197700 2197700 0 7269 487 7513 18022 14552 14552 189 1 27746 0 KGTEVQVDDIKR AIQLITAASLVCRKRKGTEVQVDDIKRVYS RKRKGTEVQVDDIKRVYSLFLDESRSTQYM R K G K R V 0 1 0 2 0 1 1 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 12 2 1386.7467 Q9Y230 Q9Y230 417 428 RUVBL2 RuvB-like 2 yes yes 3 0.00012714 153.81 By MS/MS By matching 6.33 0.471 2 1 2 1 15601000 15539000 61086 7270 2810 7514 18023;18024;18025 14553 14553 1 109320 62596 KGTGIAAQTAGIAAAAR LAFASCGTEGFRNAKKGTGIAAQTAGIAAA TGIAAQTAGIAAAARAKQKGVIHIRVVVKG K K G A R A 7 1 0 0 0 1 0 3 0 2 0 1 0 0 0 0 2 0 0 0 0 0 17 1 1526.8529 P82912 P82912 122 138 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 4.4222E-16 252.46 By MS/MS 9.5 0.5 2 2 4 4414700 4414700 0 7271 1234 7515 18026;18027;18028;18029 14554;14555;14556;14557 14557 4 153400 0 KGTGLLSSDYR SSLGSLQTPEAVTTRKGTGLLSSDYRIING VTTRKGTGLLSSDYRIINGKSGTQDIQPGP R K G Y R I 0 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 1 0 1 0 0 0 11 1 1195.6197 Q7Z2W4 Q7Z2W4 401 411 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0055441 112.85 By MS/MS 3.5 0.5 1 1 2 5317800 5317800 0 7272 1778 7516 18030;18031 14558 14558 1 396650 0 KGTNYLADVFEK MMKENFPNFLSACDKKGTNYLADVFEKKDK CDKKGTNYLADVFEKKDKNEDKKIDFSEFL K K G E K K 1 0 1 1 0 0 1 1 0 0 1 2 0 1 0 0 1 0 1 1 0 0 12 1 1383.7034 P31151 P31151 50 61 S100A7 Protein S100-A7 yes yes 2 0.0040617 121.68 By MS/MS 10 0 1 1 156510 156510 0 7273 784 7517 18032 14559 14559 1 8435.2 0 KGTVEGFEPADNK ITLKKYDGRTKPIPKKGTVEGFEPADNKCL PKKGTVEGFEPADNKCLLRATDGKKKISTV K K G N K C 1 0 1 1 0 0 2 2 0 0 0 2 0 1 1 0 1 0 0 1 0 0 13 1 1390.6729 P37108 P37108 43 55 SRP14 Signal recognition particle 14 kDa protein yes yes 2 7.3509E-05 188.15 By MS/MS 9.5 0.5 1 1 2 972740 972740 0 7274 844 7518 18033;18034 14560;14561 14561 2 50131 0 KGTVEGFEPADNKCLLR ITLKKYDGRTKPIPKKGTVEGFEPADNKCL TVEGFEPADNKCLLRATDGKKKISTVVSSK K K G L R A 1 1 1 1 1 0 2 2 0 0 2 2 0 1 1 0 1 0 0 1 0 0 17 2 1932.9727 P37108 P37108 43 59 SRP14 Signal recognition particle 14 kDa protein yes yes 3 0.00038305 165.24 By MS/MS 10 0 1 1 680860 680860 0 7275 844 7519 18035 14562;14563 14563 2 36696 0 KGVAEQKR RFMRDQEKLSLMYARKGVAEQKREKEIKSE LSLMYARKGVAEQKREKEIKSELKMKQDAQ R K G K R E 1 1 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 8 2 914.52976 P78527 P78527 2746 2753 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.013655 145.16 By MS/MS 2 0.816 1 1 1 3 240740 240740 0 7276 1225 7520 18036;18037;18038 14564;14565 14564 2 58935 0 KGVAINMVTEEDK ENYIHRIGRGGRFGRKGVAINMVTEEDKRT GRKGVAINMVTEEDKRTLRDIETFYNTSIE R K G D K R 1 0 1 1 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 2 0 0 13 1 1432.7232 P60842 P60842 369 381 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 0.00061742 191.33 By MS/MS 6 0 1 1 2621700 2621700 0 7277 1097 7521 18039 14566 14566 1 18022 0 KGVAINMVTEEDKR ENYIHRIGRGGRFGRKGVAINMVTEEDKRT RKGVAINMVTEEDKRTLRDIETFYNTSIEE R K G K R T 1 1 1 1 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 2 0 0 14 2 1588.8243 P60842 P60842 369 382 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 8.1451E-32 295.26 By MS/MS By matching 5.35 2.86 4 3 2 3 3 6 2 2 3 3 30 1 956860000 956820000 32840 7278 1097 7522;7523 18040;18041;18042;18043;18044;18045;18046;18047;18048;18049;18050;18051;18052;18053;18054;18055;18056;18057;18058;18059;18060;18061;18062;18063;18064;18065;18066;18067;18068;18069;18070 14567;14568;14569;14570;14571;14572;14573;14574;14575;14576;14577;14578;14579;14580;14581;14582;14583;14584;14585;14586;14587;14588;14589;14590;14591;14592;14593;14594;14595;14596 14576 624 28 15187000 32840 KGVEGLIDIENPNR SDESEDEEDDYQQKRKGVEGLIDIENPNRV RKGVEGLIDIENPNRVAQTTKKVTQLDLDG R K G N R V 0 1 2 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 1 0 0 14 1 1552.8209 Q13442 Q13442 75 88 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.0015998 151.66 By MS/MS 8 0 1 1 1329400 1329400 0 7279 1386 7524 18071 14597 14597 1 16784 0 KGVITVK EIGNIISDAMKKVGRKGVITVKDGKTLNDE DAMKKVGRKGVITVKDGKTLNDELEIIEGM R K G V K D 0 0 0 0 0 0 0 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 7 1 743.49052 P10809 P10809 196 202 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.019692 152.47 By MS/MS 6.5 1.12 1 1 1 1 4 48663000 48663000 0 7280 569 7525 18072;18073;18074;18075 14598 14598 1 364290 0 KGVITVKDGK EIGNIISDAMKKVGRKGVITVKDGKTLNDE KKVGRKGVITVKDGKTLNDELEIIEGMKFD R K G G K T 0 0 0 1 0 0 0 2 0 1 0 3 0 0 0 0 1 0 0 2 0 0 10 2 1043.6339 P10809 P10809 196 205 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.00023941 160.36 By MS/MS 6 0 2 2 2743500 2743500 0 7281 569 7526 18076;18077 14599;14600 14599 2 18860 0 KGVNLPGAAVDLPAVSEKDIQDLK FLVTEVENGGSLGSKKGVNLPGAAVDLPAV VDLPAVSEKDIQDLKFGVEQDVDMVFASFI K K G L K F 3 0 1 3 0 1 1 2 0 1 3 3 0 0 2 1 0 0 0 3 0 0 24 2 2476.3537 P14618 P14618 207 230 PKM Pyruvate kinase PKM yes yes 3 1.5082E-07 124.66 By MS/MS 6 0 1 1 825950 825950 0 7282 614 7527 18078 14601 14601 1 5677.8 0 KGVTSILPVLR NESKGEHVPGFCLPKKGVTSILPVLREGVL CLPKKGVTSILPVLREGVLTGSPEQKEEAA K K G L R E 0 1 0 0 0 0 0 1 0 1 2 1 0 0 1 1 1 0 0 2 0 0 11 1 1181.7496 Q92616 Q92616 2259 2269 GCN1L1 Translational activator GCN1 yes yes 2 0.033008 91.636 By MS/MS 2 0 1 1 272020 272020 0 7283 2064 7528 18079 14602 14602 1 92007 0 KGYSPTHR TGGKRHESSSEKKERKGYSPTHREEEYGKN SSEKKERKGYSPTHREEEYGKNHHNSSKKE R K G H R E 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 8 1 944.48281 CON__P20930;P20930 CON__P20930 162 169 FLG Filaggrin yes no 3 0.038119 90.709 By MS/MS 3 0 1 1 92510 0 92510 + 7284 53 7529 18080 14603 14603 1 0 11775 KGYSPTHREEEYGK TGGKRHESSSEKKERKGYSPTHREEEYGKN RKGYSPTHREEEYGKNHHNSSKKEKNKTEN R K G G K N 0 1 0 0 0 0 3 2 1 0 0 2 0 0 1 1 1 0 2 0 0 0 14 2 1679.7903 CON__P20930;P20930 CON__P20930 162 175 FLG Filaggrin yes no 3 0.026028 99.5 By matching By MS/MS 3.5 0.5 1 1 1 1 852970 142370 710600 + 7285 53 7530 18081;18082 14604 14604 1 13398 90449 KHEETECPLR VTCKCNKKLEKRLLKKHEETECPLRLAVCQ KRLLKKHEETECPLRLAVCQHCDLELSILK K K H L R L 0 1 0 0 1 0 3 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 10 1 1297.6085 O14545 O14545 77 86 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.018387 83.499 By MS/MS 5 0 1 1 608350 608350 0 7286 125 7531 18083 14605 14605 1 6101.5 0 KHFGAGGNQR SEDPDQQYLILNTARKHFGAGGNQRIRFTL LNTARKHFGAGGNQRIRFTLPPLVFAAYQL R K H Q R I 1 1 1 0 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1070.537 Q96QK1 Q96QK1 515 524 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 7.4288E-07 170.5 By MS/MS 5 0 1 1 0 0 0 7287 2217 7532 18084 14606 14606 1 0 0 KHFSQAEGSQLDEVR LIRQNKRLDAVRHARKHFSQAEGSQLDEVR KHFSQAEGSQLDEVRQAMGMLAFPPDTHIS R K H V R Q 1 1 0 1 0 2 2 1 1 0 1 1 0 1 0 2 0 0 0 1 0 0 15 1 1729.8384 Q7L5Y9 Q7L5Y9 223 237 MAEA Macrophage erythroblast attacher yes yes 3 3.7206E-07 207.08 By MS/MS 7 0 1 1 963670 963670 0 7288 1767 7533 18085 14607 14607 1 15128 0 KHLEINPDHPIVETLR QALRDNSTMGYMMAKKHLEINPDHPIVETL HLEINPDHPIVETLRQKAEADKNDKAVKDL K K H L R Q 0 1 1 1 0 0 2 0 2 2 2 1 0 0 2 0 1 0 0 1 0 0 16 1 1910.0374 P08238 P08238 624 639 HSP90AB1 Heat shock protein HSP 90-beta yes yes 4 0.013658 66.436 By MS/MS 5 0.816 1 1 1 3 3464000 3464000 0 7289 521 7534 18086;18087;18088 14608;14609 14608 2 131580 0 KHLLIGVSSDR ALYEKADIKGPEDKKKHLLIGVSSDRGLCG EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK K K H D R G 0 1 0 1 0 0 0 1 1 1 2 1 0 0 0 2 0 0 0 1 0 0 11 1 1223.6986 P36542 P36542 90 100 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 3 0.032747 71.085 By MS/MS 8 0 1 1 546060 546060 0 7290 835 7535 18089 14610 14610 1 6894 0 KHPDADSLYVEEVDVGEIAPR VSRLDLRIGCIITARKHPDADSLYVEEVDV SLYVEEVDVGEIAPRTVVSGLVNHVPLEQM R K H P R T 2 1 0 3 0 0 3 1 1 1 1 1 0 0 2 1 0 0 1 3 0 0 21 1 2338.1441 Q12904 Q12904 167 187 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 3 4.1864E-06 139.11 By MS/MS 7.5 0.5 1 1 2 1577500 1577500 0 7291 1337 7536 18090;18091 14611 14611 1 24231 0 KHPDASVNFSEFSK SYAFFVQTCREEHKKKHPDASVNFSEFSKK KKHPDASVNFSEFSKKCSERWKTMSAKEKG K K H S K K 1 0 1 1 0 0 1 0 1 0 0 2 0 2 1 3 0 0 0 1 0 0 14 1 1591.7631 P09429 P09429 30 43 HMGB1 High mobility group protein B1 yes yes 3 0.00033469 134.4 By MS/MS 8 0 1 1 2015500 2015500 0 7292 535 7537 18092 14612 14612 1 25446 0 KIAFAITAIK QHILRVLNTNIDGRRKIAFAITAIKGVGRR IDGRRKIAFAITAIKGVGRRYAHVVLRKAD R K I I K G 3 0 0 0 0 0 0 0 0 3 0 2 0 1 0 0 1 0 0 0 0 0 10 1 1074.6801 P62269 P62269 25 34 RPS18 40S ribosomal protein S18 yes yes 2;3 0.00017027 176.6 By MS/MS 9.33 0.471 2 1 3 6172000 6172000 0 7293 1149 7538 18093;18094;18095 14613;14614 14613 2 155200 0 KIAKDEGAK KGADIMYTGTVDCWRKIAKDEGAKAFFKGA TVDCWRKIAKDEGAKAFFKGAWSNVLRGMG R K I A K A 2 0 0 1 0 0 1 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 9 2 958.54475 P12235 P12235 260 268 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0075656 134.05 By MS/MS 7.5 0.5 1 1 2 167200 167200 0 7294 588 7539 18096;18097 14615 14615 1 2506 0 KIARDEGGK KGTDIMYTGTLDCWRKIARDEGGKAFFKGA TLDCWRKIARDEGGKAFFKGAWSNVLRGMG R K I G K A 1 1 0 1 0 0 1 2 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 972.53524 P05141 P05141 260 268 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.00081238 160.82 By MS/MS 8 0 1 1 625890 625890 0 7295 487 7540 18098 14616 14616 1 7901.8 0 KIDEQNKEFK RLNVGMENKVVQLQRKIDEQNKEFKTLSEQ VQLQRKIDEQNKEFKTLSEQLSVTTSTYTM R K I F K T 0 0 1 1 0 1 2 0 0 1 0 3 0 1 0 0 0 0 0 0 0 0 10 2 1277.6616 Q9ULV0 Q9ULV0 933 942 MYO5B Unconventional myosin-Vb yes yes 3 0.039987 73.841 By MS/MS By matching 2 0 2 1 1 195550 127100 68445 7296 2775 7541 18099;18100 14617 14617 1 42992 96795 KIDGLLIDQIQR TRYFGGMVWYFVNNKKIDGLLIDQIQRDLI NNKKIDGLLIDQIQRDLIDDATNLVQLYHV K K I Q R D 0 1 0 2 0 2 0 1 0 3 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1410.8195 P82650 P82650 280 291 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2;3 1.716E-08 220.5 By MS/MS 7 0 3 3 8737100 8737100 0 7297 1229 7542 18101;18102;18103 14618;14619;14620 14618 2 137160 0 KIDKYTEVLK QLMRLRKQAEKNVEKKIDKYTEVLKTHGLL KNVEKKIDKYTEVLKTHGLLV_________ K K I L K T 0 0 0 1 0 0 1 0 0 1 1 3 0 0 0 0 1 0 1 1 0 0 10 2 1235.7125 P40429 P40429 188 197 RPL13A 60S ribosomal protein L13a yes yes 3 0.0096933 134.84 By MS/MS 8.5 0.5 1 1 2 1902200 1902200 0 7298 859 7543 18104;18105 14621 14621 1 25671 0 KIEALLNLPR IESSLQEDEPENDAKKIEALLNLPRNPSVI ENDAKKIEALLNLPRNPSVIDKQDKD____ K K I P R N 1 1 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 10 1 1165.7183 Q9NPL8 Q9NPL8 265 274 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 0.0012187 136.52 By MS/MS 8 0 1 1 1955200 1955200 0 7299 2534 7544 18106 14622 14622 1 24685 0 KIEEVVER KEEIFGPVQPLFKFKKIEEVVERANNTRYG QPLFKFKKIEEVVERANNTRYGLAAAVFTR K K I E R A 0 1 0 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 8 1 1000.5553 P30837 P30837 429 436 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.043987 107.57 By MS/MS 5.5 0.5 1 1 2 4258800 4258800 0 7300 780 7545 18107;18108 14623 14623 1 29905 0 KIEFSLPDLEGR DTLDPALMRPGRLDRKIEFSLPDLEGRTHI LDRKIEFSLPDLEGRTHIFKIHARSMSVER R K I G R T 0 1 0 1 0 0 2 1 0 1 2 1 0 1 1 1 0 0 0 0 0 0 12 1 1402.7456 P35998 P35998 340 351 PSMC2 26S protease regulatory subunit 7 yes yes 2;3 1.8967E-05 185.99 By MS/MS 6.5 0.5 2 2 4 3824500 3824500 0 7301 831 7546 18109;18110;18111;18112 14624;14625;14626;14627;14628 14625 5 31576 0 KIEISQHAK KYGTRYGASLRKMVKKIEISQHAKYTCSFC LRKMVKKIEISQHAKYTCSFCGKTKMKRRA K K I A K Y 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 1 0 0 0 0 0 0 9 1 1052.5978 P61513 P61513 28 36 RPL37A 60S ribosomal protein L37a yes yes 2;3 0.00039421 166.09 By MS/MS By matching 10 0 3 2 1 1936800 1908600 28204 7302 1124 7547 18113;18114;18115 14629;14630 14630 2 102870 36109 KIEKEIQQK ______________________________ KVDFLKKIEKEIQQKWDTERVFEVNASNLE K K I Q K W 0 0 0 0 0 2 2 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 9 2 1142.6659 Q9P2J5 Q9P2J5 15 23 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.00015018 177.3 By MS/MS 3 0 1 1 803980 803980 0 7303 2684 7548 18116 14631 14631 1 14711 0 KIENVPTGPNNKPK HVVFGKIIDGLLVMRKIENVPTGPNNKPKL RKIENVPTGPNNKPKLPVVISQCGEM____ R K I P K L 0 0 3 0 0 0 1 1 0 1 0 3 0 0 3 0 1 0 0 1 0 0 14 2 1534.8467 O43447 O43447 153 166 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 3 0.00038272 146.77 By MS/MS 9.5 0.5 1 1 2 542760 542760 0 7304 211 7549 18117;18118 14632 14632 1 20136 0 KIEPGTAADSQQIHEEK VFFRVMMAELEKTVKKIEPGTAADSQQIHE EPGTAADSQQIHEEKLLYWNMAVRDFSILI K K I E K L 2 0 0 1 0 2 3 1 1 2 0 2 0 0 1 1 1 0 0 0 0 0 17 1 1879.9276 Q9BXW9 Q9BXW9 1248 1264 FANCD2 Fanconi anemia group D2 protein yes yes 3 0.00024497 145.33 By MS/MS 2.5 0.5 1 1 2 721180 721180 0 7305 2362 7550 18119;18120 14633 14633 1 48180 0 KIERQEEK KKETITESAGRQQKKKIERQEEKLKNNNRD AGRQQKKKIERQEEKLKNNNRDLSMVRMKS K K I E K L 0 1 0 0 0 1 3 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 2 1058.572 Q9UM00 Q9UM00 119 126 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2 0.0041074 157.33 By MS/MS 9.5 0.5 1 1 2 297610 297610 0 7306 2779 7551 18121;18122 14634 14634 1 6724.3 0 KIESEREK NQWKTQYSRKEEAIRKIESEREKSEREKNS RKEEAIRKIESEREKSEREKNSLRSEIERL R K I E K S 0 1 0 0 0 0 3 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 2 1017.5455 P15924 P15924 1880 1887 DSP Desmoplakin yes yes 2 0.019219 138.06 By MS/MS 2 0 1 1 183190 183190 0 7307 628 7552 18123 14635 14635 1 61961 0 KIEVLDSLQSK VTRENLEQEIAAMNKKIEVLDSLQSKAKLL AMNKKIEVLDSLQSKAKLLRNKAGWLDSEL K K I S K A 0 0 0 1 0 1 1 0 0 1 2 2 0 0 0 2 0 0 0 1 0 0 11 1 1258.7133 O95140 O95140 720 730 MFN2 Mitofusin-2 yes yes 2 0.0082291 109.39 By MS/MS 5 0 1 1 1082100 1082100 0 7308 386 7553 18124 14636 14636 0 10853 0 KIFDIDEAEEGVK DLNFFNQKKKKKKTKKIFDIDEAEEGVKDL TKKIFDIDEAEEGVKDLKIESDVQEPTEPE K K I V K D 1 0 0 2 0 0 3 1 0 2 0 2 0 1 0 0 0 0 0 1 0 0 13 1 1491.7457 P20042 P20042 87 99 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.00013324 180.09 By MS/MS 6 0 1 1 4936600 4936600 0 7309 668 7554 18125 14637 14637 1 33935 0 KIFDIDEAEEGVKDLK DLNFFNQKKKKKKTKKIFDIDEAEEGVKDL IFDIDEAEEGVKDLKIESDVQEPTEPEDDL K K I L K I 1 0 0 3 0 0 3 1 0 2 1 3 0 1 0 0 0 0 0 1 0 0 16 2 1847.9517 P20042 P20042 87 102 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.00049233 156.72 By MS/MS 6 0 1 1 8604400 8604400 0 7310 668 7555 18126 14638 14638 1 59148 0 KIFEYETQR PHGPVVGSTRRLYEKKIFEYETQRRRLSPP RRLYEKKIFEYETQRRRLSPPSSSAASSYS K K I Q R R 0 1 0 0 0 1 2 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 9 1 1212.6139 P50402 P50402 37 45 EMD Emerin yes yes 2 0.017734 110.53 By MS/MS 8.5 1.12 1 1 1 1 4 8364500 8364500 0 7311 973 7556 18127;18128;18129;18130 14639 14639 1 129260 0 KIFRDEGGK KGADIMYTGTVDCWRKIFRDEGGKAFFKGA TVDCWRKIFRDEGGKAFFKGAWSNVLRGMG R K I G K A 0 1 0 1 0 0 1 2 0 1 0 2 0 1 0 0 0 0 0 0 0 0 9 2 1048.5665 P12236 P12236 260 268 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0028915 150.36 By MS/MS 3.6 2.42 1 1 1 1 1 5 5400000 5400000 0 7312 589 7557 18131;18132;18133;18134;18135 14640;14641;14642 14642 3 329390 0 KIGDEYFTFITDCKDPK REDDVGTGAGLLEIKKIGDEYFTFITDCKD GDEYFTFITDCKDPKACTILLRGASKEILS K K I P K A 0 0 0 3 1 0 1 1 0 2 0 3 0 2 1 0 2 0 1 0 0 0 17 2 2075.9874 P49368 P49368 354 370 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0006836 162.64 By MS/MS 6 0.707 1 2 1 4 42713000 42713000 0 7313 947 7558 18136;18137;18138;18139 14643;14644;14645;14646 14644 4 319480 0 KIHIDLPNEQAR DTLDPALLRPGRLDRKIHIDLPNEQARLDI LDRKIHIDLPNEQARLDILKIHAGPITKHG R K I A R L 1 1 1 1 0 1 1 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 12 1 1432.7787 P62333 P62333 298 309 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.026774 75.088 By MS/MS 7.5 0.5 1 1 2 5572800 5572800 0 7314 1159 7559 18140;18141 14647 14647 1 86733 0 KIIATVLMTEDIK LGPRRSQQGPRKEPRKIIATVLMTEDIKLN PRKIIATVLMTEDIKLNKAEKAWKPSSKRT R K I I K L 1 0 0 1 0 0 1 0 0 3 1 2 1 0 0 0 2 0 0 1 0 0 13 1 1473.8477 Q04637 Q04637 714 726 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.3532E-05 191.79 By MS/MS 2 0 2 2 2030700 2030700 0 7315 1291 7560 18142;18143 14648;14649 14649 772 2 686850 0 KIIEDCSNSEETVK QNVADILFVRTSYVKKIIEDCSNSEETVKL KKIIEDCSNSEETVKLLRFCCWENPQFSST K K I V K L 0 0 1 1 1 0 3 0 0 2 0 2 0 0 0 2 1 0 0 1 0 0 14 1 1650.7771 Q93008 Q93008 2288 2301 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.026954 104.81 By MS/MS 2 0 1 1 383140 383140 0 7316 2085 7561 18144 14650 14650 1 129590 0 KIIEVHVEK DRCESCSGAKVIREKKIIEVHVEKGMKDGQ KVIREKKIIEVHVEKGMKDGQKILFHGEGD K K I E K G 0 0 0 0 0 0 2 0 1 2 0 2 0 0 0 0 0 0 0 2 0 0 9 1 1093.6495 Q8WW22 Q8WW22 207 215 DNAJA4 DnaJ homolog subfamily A member 4 yes yes 3 0.011763 90.149 By MS/MS 7.5 0.5 1 1 2 837070 837070 0 7317 2033 7562 18145;18146 14651 14651 1 12824 0 KIIKDGEQHEDLNEVAK GIVLWNIFNRMPIARKIIKDGEQHEDLNEV IKDGEQHEDLNEVAKLFNIHED________ R K I A K L 1 0 1 2 0 1 3 1 1 2 1 3 0 0 0 0 0 0 0 1 0 0 17 2 1965.0167 O95831 O95831 590 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3;4 0.00010952 184.48 By MS/MS 5.2 0.4 4 1 5 14308000 14308000 0 7318 429 7563 18147;18148;18149;18150;18151 14652;14653;14654;14655 14653 4 142170 0 KIKEGVEEAAK VKESLHEVSKSDLGRKIKEGVEEAAKTAKQ DLGRKIKEGVEEAAKTAKQSAESVSKGGEK R K I A K T 2 0 0 0 0 0 3 1 0 1 0 3 0 0 0 0 0 0 0 1 0 0 11 2 1200.6714 O43615 O43615 144 154 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 9.7887E-06 187.16 By MS/MS By matching 6.8 0.748 2 2 1 4 1 8799000 8788500 10575 7319 221 7564 18152;18153;18154;18155;18156 14656;14657;14658 14657 3 136160 10836 KIKNDLNLK CLDLDKVEAYRCGLKKIKNDLNLKKSLLAT YRCGLKKIKNDLNLKKSLLATMKTELQKAQ K K I L K K 0 0 2 1 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 9 2 1084.6604 P15924 P15924 813 821 DSP Desmoplakin yes yes 3 0.027271 90.709 By MS/MS By matching 2.8 0.748 2 2 1 3 2 1483000 615940 867090 7320 628 7565 18157;18158;18159;18160;18161 14659;14660 14659 2 106280 151940 KILEVHIDK DRCKSCNGRKIVREKKILEVHIDKGMKDGQ KIVREKKILEVHIDKGMKDGQKITFHGEGD K K I D K G 0 0 0 1 0 0 1 0 1 2 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1093.6495 P31689 P31689 206 214 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 3 0.0037303 108.43 By MS/MS 6 0 1 1 2202900 2202900 0 7321 787 7566 18162 14661 14661 1 15143 0 KILQDGGLQVVEK LRKVLISDSLDPCCRKILQDGGLQVVEKQN CRKILQDGGLQVVEKQNLSKEELIAELQDC R K I E K Q 0 0 0 1 0 2 1 2 0 1 2 2 0 0 0 0 0 0 0 2 0 0 13 1 1425.8191 O43175 O43175 21 33 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 0.00082853 182.41 By MS/MS 6 0 2 2 6472800 6472800 0 7322 195 7567 18163;18164 14662;14663 14662 2 44496 0 KILREEGPK RAGQTTYSGVIDCFRKILREEGPKALWKGA VIDCFRKILREEGPKALWKGAGARVFRSSP R K I P K A 0 1 0 0 0 0 2 1 0 1 1 2 0 0 1 0 0 0 0 0 0 0 9 2 1068.6291 Q9UJS0 Q9UJS0 568 576 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.017222 117.89 By MS/MS 5 0 1 1 1256400 1256400 0 7323 2748 7568 18165 14664 14664 1 12602 0 KILTPIIFK ERDRMIQVYFPKEGRKILTPIIFKEENLRT FPKEGRKILTPIIFKEENLRTMYSQDRHVD R K I F K E 0 0 0 0 0 0 0 0 0 3 1 2 0 1 1 0 1 0 0 0 0 0 9 1 1071.7056 P82650 P82650 203 211 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.037843 98.582 By MS/MS 7 0 1 1 498240 498240 0 7324 1229 7569 18166 14665 14665 1 7821.5 0 KILTPIIFKEENLR ERDRMIQVYFPKEGRKILTPIIFKEENLRT RKILTPIIFKEENLRTMYSQDRHVDVLNLC R K I L R T 0 1 1 0 0 0 2 0 0 3 2 2 0 1 1 0 1 0 0 0 0 0 14 2 1713.0189 P82650 P82650 203 216 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.001411 113.43 By MS/MS 7 0 1 1 1453100 1453100 0 7325 1229 7570 18167 14666 14666 1 22811 0 KINNLNVEENSSGDQR QNLESRTIIRGKRTRKINNLNVEENSSGDQ INNLNVEENSSGDQRRAPLAAGTWRSAPVP R K I Q R R 0 1 4 1 0 1 2 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 16 1 1815.8711 Q9Y5V3 Q9Y5V3 251 266 MAGED1 Melanoma-associated antigen D1 yes yes 3 0.016917 79.471 By MS/MS 4 0 1 1 399140 399140 0 7326 2924 7571 18168 14667 14667 1 37562 0 KINPENSK WWSRLVSSDPEINTKKINPENSKLSDLDSE DPEINTKKINPENSKLSDLDSETRSMVEKM K K I S K L 0 0 2 0 0 0 1 0 0 1 0 2 0 0 1 1 0 0 0 0 0 0 8 1 928.49779 Q9Y266 Q9Y266 268 275 NUDC Nuclear migration protein nudC yes yes 2 0.009298 136.27 By MS/MS 7 0 1 1 1797100 1797100 0 7327 2816 7572 18169 14668 14668 1 28211 0 KINQLPEAER KSNNKENITIVDISRKINQLPEAERNLLEN VDISRKINQLPEAERNLLENGSVYVGLNAA R K I E R N 1 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1196.6513 Q9H061 Q9H061 20 29 TMEM126A Transmembrane protein 126A yes yes 2;3 0.00092442 142.36 By MS/MS 9 0 2 2 5549900 5549900 0 7328 2401 7573 18170;18171 14669;14670 14669 2 109220 0 KIPPLVHSK EELVDRVFDESLNFRKIPPLVHSKTPEGNN ESLNFRKIPPLVHSKTPEGNNGRSGDPRPQ R K I S K T 0 0 0 0 0 0 0 0 1 1 1 2 0 0 2 1 0 0 0 1 0 0 9 1 1017.6335 Q5SW79 Q5SW79 1367 1375 CEP170 Centrosomal protein of 170 kDa yes yes 3 0.0012193 128.86 By MS/MS 2 0 1 1 202150 202150 0 7329 1623 7574 18172 14671 14671 1 68374 0 KIQEESLR DLFPEADKVRTMLVRKIQEESLRTYLFTYS VRTMLVRKIQEESLRTYLFTYSSVYDSISM R K I L R T 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1001.5506 Q99613;B5ME19 Q99613 782 789 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.5507E-05 180.93 By MS/MS 4 2 1 1 1 1 1 1 1 7 58645000 58645000 0 7330 2252 7575 18173;18174;18175;18176;18177;18178;18179 14672;14673;14674;14675;14676 14673 5 4733400 0 KIQGIEEYKK LLLGEDGAGKTSLIRKIQGIEEYKKGRGLE TSLIRKIQGIEEYKKGRGLEYLYLNVHDED R K I K K G 0 0 0 0 0 1 2 1 0 2 0 3 0 0 0 0 0 0 1 0 0 0 10 2 1234.6921 Q9Y6G9 Q9Y6G9 86 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 3 2.1302E-05 164.66 By MS/MS By matching 6.33 0.471 2 1 2 1 7750500 7732300 18190 7331 2943 7576 18180;18181;18182 14677 14677 1 54363 18640 KISSPTGSK WFQYPIIYDIRARPRKISSPTGSKDLQMVN IRARPRKISSPTGSKDLQMVNISLRVLSRP R K I S K D 0 0 0 0 0 0 0 1 0 1 0 2 0 0 1 3 1 0 0 0 0 0 9 1 903.50255 Q99623 Q99623 89 97 PHB2 Prohibitin-2 yes yes 2 0.037004 99.013 By MS/MS 7 0 1 1 8747300 8747300 0 7332 2254 7577 18183 14678 14678 1 137320 0 KISTVVSSK PADNKCLLRATDGKKKISTVVSSKEVNKFQ ATDGKKKISTVVSSKEVNKFQMAYSNLLRA K K I S K E 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 3 1 0 0 2 0 0 9 1 947.56515 P37108 P37108 66 74 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.053453 90.827 By MS/MS 10 0 1 1 635840 635840 0 7333 844 7578 18184 14679 14679 1 34269 0 KITGLCQEEHR LLSQFIRPHGGMLPRKITGLCQEEHRKIEE MLPRKITGLCQEEHRKIEECVKMAHRAGLL R K I H R K 0 1 0 0 1 1 2 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1369.6772 Q9NVS2 Q9NVS2 103 113 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 3 0.00019661 154.67 By MS/MS 9.5 0.5 1 1 2 2930200 2930200 0 7334 2602 7579 18185;18186 14680;14681;14682 14681 3 75508 0 KITIADCGQLE EAMERFGSRNGKTSKKITIADCGQLE____ KTSKKITIADCGQLE_______________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00015578 160.77 By MS/MS By MS/MS 10 0 3 2 1 18439000 18366000 72774 7335 1188 7580 18187;18188;18189 14683;14684;14685;14686 14683 4 989870 93171 KITIGQAPTEK ITWQRVLDTNDRFLRKITIGQAPTEKGHTR RFLRKITIGQAPTEKGHTRTAQFDISVASE R K I E K G 1 0 0 0 0 1 1 1 0 2 0 2 0 0 1 0 2 0 0 0 0 0 11 1 1184.6765 P11586 P11586 543 553 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 3.7823E-05 172.21 By MS/MS 4.33 0.471 2 1 3 4542400 4542400 0 7336 582 7581 18190;18191;18192 14687;14688;14689 14687 3 427470 0 KITIGQGNTEK ITWQRVLDTNDRFLRKITIGQGNTEKGHYR RFLRKITIGQGNTEKGHYRQAQFDIAVASE R K I E K G 0 0 1 0 0 1 1 2 0 2 0 2 0 0 0 0 2 0 0 0 0 0 11 1 1187.651 Q6UB35 Q6UB35 586 596 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 8.637E-13 238.86 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 4283500 4182700 100730 7337 1728 7582 18193;18194;18195 14690;14691 14691 2 366120 214620 KIVANPEDTR NKKEMLKIKQEQFMKKIVANPEDTRSLEAR EQFMKKIVANPEDTRSLEARIIALSVKIRS K K I T R S 1 1 1 1 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 10 1 1141.6091 P82914 P82914 114 123 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.044968 90.108 By MS/MS 8 0 1 1 0 0 0 7338 1235 7583 18196 14692 14692 1 0 0 KIVITDCGQLS KKIESFGSKSGRTSKKIVITDCGQLS____ RTSKKIVITDCGQLS_______________ K K I L S - 0 0 0 1 1 1 0 1 0 2 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1232.6435 P30405 P30405 197 207 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.01121 108.47 By MS/MS 9.5 0.5 1 1 2 1352000 1352000 0 7339 772 7584 18197;18198 14693 14693 1 39345 0 KIVNSAQTGSFK PPTPAEIPRAIQSLKKIVNSAQTGSFKQLT SLKKIVNSAQTGSFKQLTVKEAVLNGLVAT K K I F K Q 1 0 1 0 0 1 0 1 0 1 0 2 0 1 0 2 1 0 0 1 0 0 12 1 1278.6932 O75964 O75964 55 66 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 2.6922E-08 220.29 By MS/MS 10 0 1 1 718350 718350 0 7340 357 7585 18199 14694 14694 1 38716 0 KIYEDGDDDMKR DTETDPSEGLMNVLKKIYEDGDDDMKRTIN VLKKIYEDGDDDMKRTINKAWVESREKQAK K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 3 0.00032843 138.42 By MS/MS 8 0 1 1 462650 462650 0 7341 2501 7586 18200 14695 14695 1 5840.9 0 KKDASDDLDDLNFFNQK PTEDKDLEADEEDTRKKDASDDLDDLNFFN DASDDLDDLNFFNQKKKKKKTKKIFDIDEA R K K Q K K 1 0 2 5 0 1 0 0 0 0 2 3 0 2 0 1 0 0 0 0 0 0 17 2 2011.9487 P20042 P20042 63 79 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.00048733 157.91 By MS/MS 6 0 1 1 4699000 4699000 0 7342 668 7587 18201 14696 14696 1 32302 0 KKDEEFQR DEGQEELEEVQAELKKKDEEFQRTKLLNGP EVQAELKKKDEEFQRTKLLNGPGDVETGTS K K K Q R T 0 1 0 1 0 1 2 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 8 2 1078.5407 Q9HC07 Q9HC07 199 206 TMEM165 Transmembrane protein 165 yes yes 3 0.024984 90.601 By MS/MS 1.5 0.5 1 1 2 628470 628470 0 7343 2508 7588 18202;18203 14697 14697 1 194570 0 KKDELER LINAAKGSSNSYAIKKKDELERVAKSNR__ SSNSYAIKKKDELERVAKSNR_________ K K K E R V 0 1 0 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 7 2 916.49779 P46782 P46782 192 198 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.00095611 180.93 By MS/MS 9.5 0.5 1 1 2 22966000 22966000 0 7344 919 7589 18204;18205 14698 14698 1 457250 0 KKDQVTAQEIFQDNHEDGPTAK PLSKIKTLFPLIEAKKKDQVTAQEIFQDNH QEIFQDNHEDGPTAKKLKTEQGGAHFSVSS K K K A K K 2 0 1 3 0 3 2 1 1 1 0 3 0 1 1 0 2 0 0 1 0 0 22 2 2498.2037 P13010 P13010 544 565 XRCC5 X-ray repair cross-complementing protein 5 yes yes 4 0.0045906 70.907 By MS/MS 4.5 0.5 1 1 2 2597800 2597800 0 7345 597 7590 18206;18207 14699 14699 1 144040 0 KKEAGGGGVGGPGAK DESDPFEVLKAAENKKKEAGGGGVGGPGAK KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG K K K A K S 2 0 0 0 0 0 1 7 0 0 0 3 0 0 1 0 0 0 0 1 0 0 15 2 1268.6837 Q8NC51 Q8NC51 38 52 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 2.4671E-09 173.76 By MS/MS 6 0 1 1 752190 752190 0 7346 1946 7591 18208 14700 14700 0 5170.8 0 KKELEEIVQPIISK LESHQDADIEDFKAKKKELEEIVQPIISKL KKKELEEIVQPIISKLYGSAGPPPTGEEDT K K K S K L 0 0 0 0 0 1 3 0 0 3 1 3 0 0 1 1 0 0 0 1 0 0 14 2 1652.9713 P11021 P11021 620 633 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 1.5707E-42 318.47 By MS/MS 5.33 0.471 2 1 3 31320000 31320000 0 7347 571 7592 18209;18210;18211 14701;14702 14702 2 311590 0 KKETITESAGR RLKAEVEKQSKKLEKKKETITESAGRQQKK KLEKKKETITESAGRQQKKKIERQEEKLKN K K K G R Q 1 1 0 0 0 0 2 1 0 1 0 2 0 0 0 1 2 0 0 0 0 0 11 2 1218.6568 Q9UM00 Q9UM00 104 114 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2;3 3.4227E-06 197.73 By MS/MS 9.33 0.471 2 1 3 3062300 3062300 0 7348 2779 7593 18212;18213;18214 14703;14704 14704 2 65242 0 KKGPTAAQAK ______________________________ VTVLRKKGPTAAQAKSKQAILAAQRRGEDV R K K A K S 3 0 0 0 0 1 0 1 0 0 0 3 0 0 1 0 1 0 0 0 0 0 10 2 998.58728 O60869 O60869 14 23 EDF1 Endothelial differentiation-related factor 1 yes yes 2 0.0099826 100.02 By MS/MS 9.5 0.5 1 1 2 66706 66706 0 7349 284 7594 18215;18216 14705 14705 1 2419.4 0 KKHLLIGVSSDR LALYEKADIKGPEDKKKHLLIGVSSDRGLC EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK K K K D R G 0 1 0 1 0 0 0 1 1 1 2 2 0 0 0 2 0 0 0 1 0 0 12 2 1351.7936 P36542 P36542 89 100 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 3 0.035983 73.466 By MS/MS 8 0 1 1 786390 786390 0 7350 835 7595 18217 14706 14706 1 9928.1 0 KKIPDPDSDDVSEVDAR QPQAAQPPTLPVEEKKKIPDPDSDDVSEVD IPDPDSDDVSEVDARHIIENAKQDVDDEYG K K K A R H 1 1 0 5 0 0 1 0 0 1 0 2 0 0 2 2 0 0 0 2 0 0 17 2 1884.9065 P51532 P51532 688 704 SMARCA4 Transcription activator BRG1 yes yes 3 0.011493 142.39 By MS/MS 2 0 1 1 196270 196270 0 7351 995 7596 18218 14707;14708 14707 2 66385 0 KKLGELTGTVK KTIESETVRTSEVLRKKLGELTGTVKESLH EVLRKKLGELTGTVKESLHEVSKSDLGRKI R K K V K E 0 0 0 0 0 0 1 2 0 0 2 3 0 0 0 0 2 0 0 1 0 0 11 2 1172.7129 O43615 O43615 120 130 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.036146 73.951 By MS/MS 7 0 1 1 951690 951690 0 7352 221 7597 18219 14709 14709 1 14940 0 KKLLADQAEAR ILMEHIHKLKADKARKKLLADQAEARRSKT DKARKKLLADQAEARRSKTKEARKRREERL R K K A R R 3 1 0 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 11 2 1241.7092 P84098 P84098 152 162 RPL19 60S ribosomal protein L19 yes yes 3 0.0025451 111.52 By MS/MS 8 0 1 1 0 0 0 7353 1247 7598 18220 14710 14710 1 0 0 KKLVIVGDGACGK ______________________________ IRKKLVIVGDGACGKTCLLIVFSKDQFPEV R K K G K T 1 0 0 1 1 0 0 3 0 1 1 3 0 0 0 0 0 0 0 2 0 0 13 2 1343.7595 P61586;P08134 P61586 6 18 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 3 0.00039103 135.94 By MS/MS 9 0 1 1 1199200 1199200 0 7354 1125;518 7599 18221 14711 14711 1 23601 0 KKNLQYYDISAK IKDRKVKAKSIVFHRKKNLQYYDISAKSNY FHRKKNLQYYDISAKSNYNFEKPFLWLARK R K K A K S 1 0 1 1 0 1 0 0 0 1 1 3 0 0 0 1 0 0 2 0 0 0 12 2 1469.7878 P62826 P62826 141 152 RAN GTP-binding nuclear protein Ran yes yes 3 0.012229 85.672 By MS/MS 8.5 0.5 1 1 2 878490 878490 0 7355 1172 7600 18222;18223 14712 14712 0 14489 0 KKSEAPSGESR EDEDEDGVSAATFLKKKSEAPSGESRKFLK TFLKKKSEAPSGESRKFLKKMDDEDEDSED K K K S R K 1 1 0 0 0 0 2 1 0 0 0 2 0 0 1 3 0 0 0 0 0 0 11 2 1174.5942 Q99613;B5ME19 Q99613 199 209 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.0082235 123.67 By MS/MS 4.5 0.5 1 1 2 452850 452850 0 7356 2252 7601 18224;18225 14713 14713 1 38034 0 KKTATAVAHCK MPSKGPLQSVQVFGRKKTATAVAHCKRGNG VFGRKKTATAVAHCKRGNGLIKVNGRPLEM R K K C K R 3 0 0 0 1 0 0 0 1 0 0 3 0 0 0 0 2 0 0 1 0 0 11 2 1213.6601 P62249 P62249 16 26 RPS16 40S ribosomal protein S16 yes yes 3 0.035196 93.839 By MS/MS 10 0 1 1 50566 50566 0 7357 1145 7602 18226 14714 14714 1 2725.3 0 KKVVDPFSK GKNKRLTKGGKKGAKKKVVDPFSKKDWYDV GKKGAKKKVVDPFSKKDWYDVKAPAMFNIR K K K S K K 0 0 0 1 0 0 0 0 0 0 0 3 0 1 1 1 0 0 0 2 0 0 9 2 1046.6124 P61247 P61247 19 27 RPS3A 40S ribosomal protein S3a yes yes 3 0.020265 86.898 By MS/MS 8 0 1 1 2139700 2139700 0 7358 1118 7603 18227 14715 14715 1 27013 0 KLAETEKR KHLMLLRQEYVKLQKKLAETEKRCALLAAQ EYVKLQKKLAETEKRCALLAAQANKESSSE K K L K R C 1 1 0 0 0 0 2 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 8 2 973.55564 Q9P2R3 Q9P2R3 26 33 ANKFY1 Rabankyrin-5 yes yes 2 0.013538 115.49 By MS/MS 3 0 1 1 0 0 0 7359 2689 7604 18228 14716 14716 1 0 0 KLAQALLEQGGR KCGPITSTTRFIFEKKLAQALLEQGGRLSS FEKKLAQALLEQGGRLSSFYHHEAGVTALS K K L G R L 2 1 0 0 0 2 1 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 1 1282.7357 Q86XL3 Q86XL3 105 116 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0055338 113.67 By MS/MS 4 0 1 1 1797500 1797500 0 7360 1845 7605 18229 14717 14717 1 169160 0 KLASQADSTEQVDDTILT ASLEVLNEVNRRSLKKLASQADSTEQVDDT SQADSTEQVDDTILT_______________ K K L L T - 2 0 0 3 0 2 1 0 0 1 2 1 0 0 0 2 3 0 0 1 0 0 18 1 1933.948 Q92616 Q92616 2654 2671 GCN1L1 Translational activator GCN1 yes yes 2 0.0082643 105.19 By MS/MS 2.5 0.5 1 1 2 756480 756480 0 7361 2064 7606 18230;18231 14718 14718 1 207680 0 KLAVNMVPFPR TTCLRFPGQLNADLRKLAVNMVPFPRLHFF ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG R K L P R L 1 1 1 0 0 0 0 0 0 0 1 1 1 1 2 0 0 0 0 2 0 0 11 1 1270.722 P04350;P68371;Q3ZCM7;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 252 262 TUBB4A;TUBB4B;TUBB8;TUBB1;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2;3 7.104E-05 163.15 By MS/MS 6.71 0.7 3 3 1 7 19410000 19410000 0 7362 1212;509;1412;2331;472;1393;2324 7607;7608 18232;18233;18234;18235;18236;18237;18238 14719;14720;14721;14722;14723 14722 178 5 151650 0 KLDAQVQELHAK KVLQQVKAESEHKRKKLDAQVQELHAKVSE KRKKLDAQVQELHAKVSEGDRLRVELAEKA K K L A K V 2 0 0 1 0 2 1 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 12 1 1378.7569 P35580 P35580 1256 1267 MYH10 Myosin-10 yes yes 3 2.2215E-06 193.22 By MS/MS 2 0 1 1 606950 606950 0 7363 825 7609 18239 14724 14724 1 205300 0 KLDDAIEDCTNAVK AKLYCNRGTVNSKLRKLDDAIEDCTNAVKL RKLDDAIEDCTNAVKLDDTYIKAYLRRAQC R K L V K L 2 0 1 3 1 0 1 0 0 1 1 2 0 0 0 0 1 0 0 1 0 0 14 1 1590.7559 Q99615 Q99615 309 322 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 8.0621E-07 214 By MS/MS 6 0 1 1 2689800 2689800 0 7364 2253 7610 18240 14725 14725 1 18490 0 KLDDTDPVPR KEQEAKYQASHPNLRKLDDTDPVPRGAGSA HPNLRKLDDTDPVPRGAGSAMSTDAYPKNP R K L P R G 0 1 0 3 0 0 0 0 0 0 1 1 0 0 2 0 1 0 0 1 0 0 10 1 1154.5932 O95721 O95721 169 178 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.005032 114.51 By MS/MS 8.5 0.5 1 1 2 1047100 1047100 0 7365 423 7611 18241;18242 14726 14726 1 14104 0 KLDEAVAEAHLGK THPDKYPVGVHFLPKKLDEAVAEAHLGKLN PKKLDEAVAEAHLGKLNVKLTKLTEKQAQY K K L G K L 3 0 0 1 0 0 2 1 1 0 2 2 0 0 0 0 0 0 0 1 0 0 13 1 1379.7409 P23526 P23526 389 401 AHCY Adenosylhomocysteinase yes yes 3 0.00096335 118.76 By MS/MS 7 0 1 1 2489300 2489300 0 7366 706 7612 18243 14727 14727 1 39078 0 KLDELYGTWR GHVGRFCIWTESAFRKLDELYGTWRKAASL ESAFRKLDELYGTWRKAASLKSNYNLPMHK R K L W R K 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 0 1 1 1 0 0 0 10 1 1279.6561 P36578 P36578 259 268 RPL4 60S ribosomal protein L4 yes yes 2 0.0039812 120.45 By MS/MS 6.5 0.5 1 1 2 3527400 3527400 0 7367 838 7613 18244;18245 14728 14728 1 30714 0 KLDEQYQK FMKQPGNETADTVLKKLDEQYQKYKFMELN TADTVLKKLDEQYQKYKFMELNLAQKKRRL K K L Q K Y 0 0 0 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 8 1 1050.5346 P61758 P61758 52 59 VBP1 Prefoldin subunit 3 yes yes 2 1.2311E-05 185.55 By MS/MS 8.5 0.5 1 1 2 1708900 1708900 0 7368 1129 7614 18246;18247 14729;14730 14729 2 25712 0 KLDPGSEETQTLVR LSPDWQVDYESYTWRKLDPGSEETQTLVRE RKLDPGSEETQTLVREYFSWEGAFQHVGKA R K L V R E 0 1 0 1 0 1 2 1 0 0 2 1 0 0 1 1 2 0 0 1 0 0 14 1 1571.8155 P26641 P26641 401 414 EEF1G Elongation factor 1-gamma yes yes 2;3 2.8535E-05 190.37 By MS/MS By matching 7.82 1.47 3 2 2 2 2 10 1 52676000 52631000 44946 7369 736 7615 18248;18249;18250;18251;18252;18253;18254;18255;18256;18257;18258 14731;14732;14733;14734;14735 14733 5 482240 46056 KLDQVSQFGCR DITFSNPKEVSTLKRKLDQVSQFGCRSFAL TLKRKLDQVSQFGCRSFALLFDDIDHNMCA R K L C R S 0 1 0 1 1 2 0 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 1 1336.6558 O60502 O60502 157 167 MGEA5 Protein O-GlcNAcase yes yes 2 0.0088156 110.54 By MS/MS 3 0 1 1 0 0 0 7370 260 7616 18259 14736 14736 1 0 0 KLEAAEDIAYQLSR ANSLATAGDGLIELRKLEAAEDIAYQLSRS RKLEAAEDIAYQLSRSRNITYLPAGQSVLL R K L S R S 3 1 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 1 0 0 0 14 1 1605.8362 P35232 P35232 240 253 PHB Prohibitin yes yes 2;3 0.0001341 231.07 By MS/MS By matching 8 0 3 2 1 22260000 22149000 111210 7371 814 7617 18260;18261;18262 14737;14738 14737 2 279630 150070 KLECLPPEPSPDDPESVK AEERRRQNLQEEKERKLECLPPEPSPDDPE CLPPEPSPDDPESVKIIFKLPNDSRVERRF R K L V K I 0 0 0 2 1 0 3 0 0 0 2 2 0 0 5 2 0 0 0 1 0 0 18 1 2035.9772 Q96CS3 Q96CS3 346 363 FAF2 FAS-associated factor 2 yes yes 3 0.022457 68.123 By MS/MS 6.5 0.5 1 1 2 3623600 3623600 0 7372 2126 7618 18263;18264 14739 14739 1 28166 0 KLEEEQIILEDQNCK QKLQLEKVTTEAKLKKLEEEQIILEDQNCK KLEEEQIILEDQNCKLAKEKKLLEDRIAEF K K L C K L 0 0 1 1 1 2 4 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 15 1 1887.9248 P35579 P35579 975 989 MYH9 Myosin-9 yes yes 2;3 6.0875E-24 290.1 By MS/MS 2 0 2 2 1406000 1406000 0 7373 824 7619 18265;18266 14740;14741 14741 2 475560 0 KLEEVERK AKREEELREYQERVKKLEEVERKKRQRELE EYQERVKKLEEVERKKRQRELEIEERERRR K K L R K K 0 1 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 2 1029.5819 Q14152 Q14152 850 857 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0026518 134.26 By MS/MS 2.5 0.957 1 2 2 1 6 9236700 9236700 0 7374 1422 7620 18267;18268;18269;18270;18271;18272 14742;14743 14742 2 264510 0 KLEKQNEQLR VNAELEVKKLQELVRKLEKQNEQLRSRAAS QELVRKLEKQNEQLRSRAASAAAAPHLLLL R K L L R S 0 1 1 0 0 2 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1284.715 Q8ND83;Q9P270 Q8ND83 38 47 SLAIN1;SLAIN2 SLAIN motif-containing protein 1;SLAIN motif-containing protein 2 no no 3 0.048812 72.096 By MS/MS 5 0 1 1 775510 775510 0 7375 1956;2679 7621 18273 14744 14744 1 7777.9 0 KLENSPLGEALR AGKLSYVKTCQEKFKKLENSPLGEALRSGQ KFKKLENSPLGEALRSGQARRSSPPGHYYQ K K L L R S 1 1 1 0 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 0 0 0 12 1 1325.7303 Q9NX40 Q9NX40 104 115 OCIAD1 OCIA domain-containing protein 1 yes yes 2 0.0039072 149.94 By MS/MS 7 0 1 1 661150 661150 0 7376 2618 7622 18274 14745 14745 1 10379 0 KLEQCNTELKK AFEKYQTLSLKQLFRKLEQCNTELKKYSHV QLFRKLEQCNTELKKYSHVNKKALDQFVNF R K L K K Y 0 0 1 0 1 1 2 0 0 0 2 3 0 0 0 0 1 0 0 0 0 0 11 2 1389.7286 Q9UQE7 Q9UQE7 968 978 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 1.7445E-05 163.45 By MS/MS 3 0 1 1 895540 895540 0 7377 2807 7623 18275 14746 14746 1 16386 0 KLERPPETPTVDPTVK EEGRPGKKLKKVKLRKLERPPETPTVDPTV LERPPETPTVDPTVKYERQPEYLDATGGTL R K L V K Y 0 1 0 1 0 0 2 0 0 0 1 2 0 0 4 0 3 0 0 2 0 0 16 2 1805.9887 Q14839 Q14839 696 711 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 3 0.024003 77.068 By MS/MS 1.5 0.5 1 1 2 1426600 1426600 0 7378 1459 7624 18276;18277 14747 14747 1 471510 0 KLESVAEEHEILTK ERAQSDIEHLFQHNRKLESVAEEHEILTKS RKLESVAEEHEILTKSYMELLQRNESTEKK R K L T K S 1 0 0 0 0 0 4 0 1 1 2 2 0 0 0 1 1 0 0 1 0 0 14 1 1624.8672 Q8TCG1 Q8TCG1 716 729 KIAA1524 Protein CIP2A yes yes 2 0.011126 101.72 By MS/MS 4 0 1 1 286190 286190 0 7379 1990 7625 18278 14748 14748 0 26932 0 KLFADAEEEQR EILNKYVGESEANIRKLFADAEEEQRRLGA ANIRKLFADAEEEQRRLGANSGLHIIIFDE R K L Q R R 2 1 0 1 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 11 1 1334.6466 P46459 P46459 304 314 NSF Vesicle-fusing ATPase yes yes 2 6.6701E-05 164.33 By MS/MS 5 0 1 1 1272100 1272100 0 7380 912 7626 18279 14749 14749 1 12758 0 KLFADAEEEQRR EILNKYVGESEANIRKLFADAEEEQRRLGA NIRKLFADAEEEQRRLGANSGLHIIIFDEI R K L R R L 2 2 0 1 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 12 2 1490.7478 P46459 P46459 304 315 NSF Vesicle-fusing ATPase yes yes 2;3 0.0055549 135.8 By MS/MS By matching 5.6 0.8 3 1 1 4 1 6862800 6836400 26418 7381 912 7627 18280;18281;18282;18283;18284 14750;14751 14751 2 66979 22186 KLFNLSK TVPRRLGPKRASRIRKLFNLSKEDDVRQYV PKRASRIRKLFNLSKEDDVRQYVVRKPLNK R K L S K E 0 0 1 0 0 0 0 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 7 1 848.51199 P62753 P62753 143 149 RPS6 40S ribosomal protein S6 yes yes 2 0.023996 147.34 By MS/MS 8 0 1 1 7240200 7240200 0 7382 1169 7628 18285 14752 14752 1 91407 0 KLFNLSKEDDVR TVPRRLGPKRASRIRKLFNLSKEDDVRQYV RIRKLFNLSKEDDVRQYVVRKPLNKEGKKP R K L V R Q 0 1 1 2 0 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 12 2 1462.778 P62753 P62753 143 154 RPS6 40S ribosomal protein S6 yes yes 2;3 1.6718E-05 194.48 By MS/MS 8 0 2 2 33885000 33885000 0 7383 1169 7629 18286;18287 14753;14754 14754 2 427790 0 KLFVQDLATR EETVAKELQTLHNLRKLFVQDLATRVKKSA LHNLRKLFVQDLATRVKKSAEIDSDDTGGS R K L T R V 1 1 0 1 0 1 0 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 1 1189.6819 P33176 P33176 801 810 KIF5B Kinesin-1 heavy chain yes yes 2 0.015869 106.4 By MS/MS 4 0 1 1 2684500 2684500 0 7384 800 7630 18288 14755 14755 1 252630 0 KLGGSLADSYLDEGFLLDKK RLKGSGNLEAIHIIKKLGGSLADSYLDEGF LADSYLDEGFLLDKKIGVNQPKRIENAKIL K K L K K I 1 0 0 3 0 0 1 3 0 0 5 3 0 1 0 2 0 0 1 0 0 0 20 2 2168.1365 P78371 P78371 204 223 CCT2 T-complex protein 1 subunit beta yes yes 3;4 5.7261E-06 182.77 By MS/MS 6 0 2 2 17416000 17416000 0 7385 1222 7631 18289;18290 14756;14757 14756 2 119720 0 KLGGTIDDCELVEGLVLTQK ATATSVDLRDIKIVKKLGGTIDDCELVEGL IDDCELVEGLVLTQKVSNSGITRVEKAKIG K K L Q K V 0 0 0 2 1 1 2 3 0 1 4 2 0 0 0 0 2 0 0 2 0 0 20 1 2187.1457 P50991 P50991 213 232 CCT4 T-complex protein 1 subunit delta yes yes 2;3 8.0137E-08 238.83 By MS/MS 6 0 3 3 22156000 22156000 0 7386 985 7632 18291;18292;18293 14758;14759;14760 14759 3 152310 0 KLGINKTDPSTLTEEEVSK NGVREFSEIQLARLKKLGINKTDPSTLTEE NKTDPSTLTEEEVSKFARLDIDPSTITWQR K K L S K F 0 0 1 1 0 0 3 1 0 1 2 3 0 0 1 2 3 0 0 1 0 0 19 2 2088.095 Q6UB35 Q6UB35 542 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.010654 72.676 By MS/MS 4 0 1 1 1451200 1451200 0 7387 1728 7633 18294 14761 14761 0 136570 0 KLHLKDK DENTALDDAEEESFRKLHLKDKKRFEKANQ DAEEESFRKLHLKDKKRFEKANQDSGPGLS R K L D K K 0 0 0 1 0 0 0 0 1 0 2 3 0 0 0 0 0 0 0 0 0 0 7 2 880.54944 Q14257 Q14257 149 155 RCN2 Reticulocalbin-2 yes yes 2 0.032738 158.36 By MS/MS 6 0 1 1 658610 658610 0 7388 1436 7634 18295 14762 14762 1 4527.5 0 KLLDIVAR VQGSTSKHEFQAETKKLLDIVARSLYSEKE EFQAETKKLLDIVARSLYSEKEVFIRELIS K K L A R S 1 1 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 1 926.5913 Q12931 Q12931 96 103 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.017484 124.98 By MS/MS 5 0 1 1 2075500 2075500 0 7389 1340 7635 18296 14763 14763 1 20817 0 KLLEGEECR MNVKLALDVEIATYRKLLEGEECRMSGDLS EIATYRKLLEGEECRMSGDLSSNVTVSVTS R K L C R M 0 1 0 0 1 0 3 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1132.5547 CON__P13647;P13647;P12036;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__P02538;P02538;CON__O95678;O95678;CON__P07744;CON__P04259;CON__P48668;P48668;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q3TTY5 CON__P35908v2 482 490 KRT5;NEFH;KRT2;KRT6A;KRT75;KRT6C;KRT74;KRT73 Keratin, type II cytoskeletal 5;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 no no 2;3 2.2993E-06 187.22 By MS/MS By MS/MS 4.88 2.93 4 3 4 1 3 3 3 1 1 3 12 14 17368000 10146000 7222000 + 7390 55;52;44;56;40;74;65;62 7636 18297;18298;18299;18300;18301;18302;18303;18304;18305;18306;18307;18308;18309;18310;18311;18312;18313;18314;18315;18316;18317;18318;18319;18320;18321;18322 14764;14765;14766;14767;14768;14769;14770;14771;14772;14773;14774;14775;14776;14777;14778;14779;14780;14781;14782;14783 14781 20 629310 5264400 KLLEGEEYSR MNVKLALDVEIATYRKLLEGEEYSRMSGEC IATYRKLLEGEEYSRMSGECPSAVSISVVS R K L S R M 0 1 0 0 0 0 3 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 10 1 1222.6194 CON__P12035 CON__P12035 504 513 yes yes 3 0.036737 70.552 By MS/MS 4 0 1 1 1421200 1421200 0 + 7391 48 7637 18323 14784 14784 1 133740 0 KLLIIGTTSR QALLVLLKKAPPQGRKLLIIGTTSRKDVLQ PPQGRKLLIIGTTSRKDVLQEMEMLNAFST R K L S R K 0 1 0 0 0 0 0 1 0 2 2 1 0 0 0 1 2 0 0 0 0 0 10 1 1100.6917 P46459 P46459 639 648 NSF Vesicle-fusing ATPase yes yes 2 0.011476 109.29 By MS/MS 5 0 1 1 2039300 2039300 0 7392 912 7638 18324 14785 14785 1 20453 0 KLLMMAGIDDCYTSAR PAPRGTGIVSAPVPKKLLMMAGIDDCYTSA LLMMAGIDDCYTSARGCTATLGNFAKATFD K K L A R G 2 1 0 2 1 0 0 1 0 1 2 1 2 0 0 1 1 0 1 0 0 0 16 1 1843.8631 P15880 P15880 212 227 RPS2 40S ribosomal protein S2 yes yes 3 1.9786E-07 208.79 By MS/MS 8 0 1 1 1099700 1099700 0 7393 627 7639 18325 14786 14786 299;300 1 13883 0 KLLYPLQEVER QAFAEVLRLPKQQLRKLLYPLQEVERFLAP QQLRKLLYPLQEVERFLAPYGRQDLHLRIF R K L E R F 0 1 0 0 0 1 2 0 0 0 3 1 0 0 1 0 0 0 1 1 0 0 11 1 1386.7871 Q8N3Z3 Q8N3Z3 46 56 GTPBP8 GTP-binding protein 8 yes yes 2;3 0.02212 119.74 By MS/MS 8 0 2 2 1528800 1528800 0 7394 1913 7640 18326;18327 14787;14788 14787 2 19300 0 KLMEECKR MPKPHSVSLNDTETRKLMEECKRLQGEMMK LNDTETRKLMEECKRLQGEMMKLSEENRHL R K L K R L 0 1 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 8 2 1092.542 Q9P0L0 Q9P0L0 174 181 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.010877 107.69 By MS/MS 8 0 1 1 680100 680100 0 7395 2665 7641 18328 14789 14789 1 8586.2 0 KLNEILQAR MFAKGTEITHAVVIKKLNEILQARGKKGTD HAVVIKKLNEILQARGKKGTDRAAQIELLQ K K L A R G 1 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1083.64 Q99613;B5ME19 Q99613 332 340 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.000164 171.99 By MS/MS 4.5 0.5 2 2 4 42294000 42294000 0 7396 2252 7642 18329;18330;18331;18332 14790;14791;14792 14790 3 3939300 0 KLNEQSPTR RDLQQYQSQAKQLFRKLNEQSPTRCTLEAG AKQLFRKLNEQSPTRCTLEAGAMTFHYIIE R K L T R C 0 1 1 0 0 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 1 1071.5673 O75396 O75396 43 51 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0055875 125.97 By MS/MS 9 0.816 1 1 1 3 6769800 6769800 0 7397 323 7643 18333;18334;18335 14793;14794 14794 2 107260 0 KLNQGTER FDAKNPFLAAVTTNRKLNQGTERHLMHLEL AAVTTNRKLNQGTERHLMHLELDISDSKIR R K L E R H 0 1 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 1 944.50394 P16435 P16435 291 298 POR NADPH--cytochrome P450 reductase yes yes 2 0.009298 136.27 By MS/MS 4 0.816 1 1 1 3 1976900 1976900 0 7398 634 7644 18336;18337;18338 14795 14795 1 28114 0 KLNVTEQEK VEHINKTIAPALVSKKLNVTEQEKIDKLMI PALVSKKLNVTEQEKIDKLMIEMDGTENKS K K L E K I 0 0 1 0 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 1 0 0 9 1 1087.5873 P06733 P06733 81 89 ENO1 Alpha-enolase yes yes 2 0.002333 131.62 By MS/MS 6 0 1 1 0 0 0 7399 500 7645 18339 14796 14796 1 0 0 KLPIQEFHLSR GSPVLMRHLTASEAKKLPIQEFHLSRILQE SEAKKLPIQEFHLSRILQELGLNQEQFVDL K K L S R I 0 1 0 0 0 1 1 0 1 1 2 1 0 1 1 1 0 0 0 0 0 0 11 1 1366.7721 P39748 P39748 201 211 FEN1 Flap endonuclease 1 yes yes 3 0.022013 79.283 By MS/MS 7 0 1 1 980180 980180 0 7400 856 7646 18340 14797 14797 1 15387 0 KLPVSSLTISR CLADLASLMDKTFERKLPVSSLTISRLIDN TFERKLPVSSLTISRLIDNISSREEIDHAE R K L S R L 0 1 0 0 0 0 0 0 0 1 2 1 0 0 1 3 1 0 0 1 0 0 11 1 1199.7238 Q92552 Q92552 64 74 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.026379 96.756 By MS/MS 7 0 1 1 7508600 7508600 0 7401 2054 7647 18341 14798 14798 1 117870 0 KLQAQMK DSANKNRDEAIKQLRKLQAQMKDCMRELDD DEAIKQLRKLQAQMKDCMRELDDTRASREE R K L M K D 1 0 0 0 0 2 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 7 1 845.47931 P35580;P35579 P35579 1642 1648 MYH10;MYH9 Myosin-10;Myosin-9 no no 2 0.055527 119.22 By MS/MS 2 0 1 1 264620 264620 0 7402 824;825 7648 18342 14799 14799 1 89505 0 KLQELSSK NLVLSVREVRQLTLRKLQELSSKADEASEL VRQLTLRKLQELSSKADEASELACPTPKED R K L S K A 0 0 0 0 0 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 8 1 931.53385 P49327 P49327 2186 2193 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.5474E-06 199.68 By MS/MS By matching 4.14 1.81 2 1 1 1 1 1 6 1 10707000 10662000 45095 7403 946 7649 18343;18344;18345;18346;18347;18348;18349 14800;14801 14801 2 1931200 63774 KLQELSSKADEASELACPTPK NLVLSVREVRQLTLRKLQELSSKADEASEL SKADEASELACPTPKEDGLAQQQTQLNLRS R K L P K E 3 0 0 1 1 1 3 0 0 0 3 3 0 0 2 3 1 0 0 0 0 0 21 2 2301.1522 P49327 P49327 2186 2206 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.00080601 96.455 By MS/MS 2 0 1 1 457600 457600 0 7404 946 7650 18350 14802 14802 1 154780 0 KLQENLK PEKPTREKKFLDDIKKLQENLKKTLDNVAI KKFLDDIKKLQENLKKTLDNVAIVEEEKME K K L L K K 0 0 1 0 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 1 871.51272 Q9C0C9 Q9C0C9 859 865 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 2 0.035203 134.66 By MS/MS By matching 7 0 2 1 1 2405300 2349000 56302 7405 2392 7651 18351;18352 14803 14803 1 36875 101400 KLQEQEVFFK KLRPRKKTLEEEFARKLQEQEVFFKMTGES EEFARKLQEQEVFFKMTGESECLNPSTQSR R K L F K M 0 0 0 0 0 2 2 0 0 0 1 2 0 2 0 0 0 0 0 1 0 0 10 1 1294.6921 Q9H2G2 Q9H2G2 1196 1205 SLK STE20-like serine/threonine-protein kinase yes yes 2 8.7633E-08 200.56 By MS/MS 2 0 1 1 846750 846750 0 7406 2429 7652 18353 14804 14804 1 286410 0 KLQESTQTVQSLHGSSR RRIRRLEQEKLELSRKLQESTQTVQSLHGS QESTQTVQSLHGSSRALSNSNRDKEIKKLN R K L S R A 0 1 0 0 0 3 1 1 1 0 2 1 0 0 0 4 2 0 0 1 0 0 17 1 1884.9654 Q9Y5S2 Q9Y5S2 460 476 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 3 0.0064525 119.04 By MS/MS 2 0 1 1 195340 195340 0 7407 2921 7653 18354 14805 14805 1 66071 0 KLQFFCDPR EEYEAMPVEVKLLPRKLQFFCDPRKREQML VKLLPRKLQFFCDPRKREQMLTSPTQ____ R K L P R K 0 1 0 1 1 1 0 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 9 1 1209.5965 Q53H12 Q53H12 403 411 AGK Acylglycerol kinase, mitochondrial yes yes 3 0.031391 90.15 By MS/MS 7 0 1 1 2038200 2038200 0 7408 1589 7654 18355 14806 14806 1 31996 0 KLQFLELQK LVITDRYKNLPTASRKLQFLELQKDLVDDF LPTASRKLQFLELQKDLVDDFRIRLTQVMK R K L Q K D 0 0 0 0 0 2 1 0 0 0 3 2 0 1 0 0 0 0 0 0 0 0 9 1 1145.6808 Q6NUQ1 Q6NUQ1 502 510 RINT1 RAD50-interacting protein 1 yes yes 2 3.1064E-06 181.55 By MS/MS 4.5 0.5 1 1 2 1975100 1975100 0 7409 1688 7655 18356;18357 14807;14808 14807 2 102890 0 KLRDVLQQR LNLSRELLQESALIRKLRDVLQQRLIKFFI ESALIRKLRDVLQQRLIKFFIDQSKKDAEK R K L Q R L 0 2 0 1 0 2 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 2 1154.6884 Q12931 Q12931 413 421 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.011858 93.598 By MS/MS 5 0 1 1 424570 424570 0 7410 1340 7656 18358 14809 14809 1 4258.2 0 KLSEADNR VAQKREDAVSKEVTRKLSEADNRKMSRKEK VSKEVTRKLSEADNRKMSRKEKDERILWKK R K L N R K 1 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 1 931.47231 Q9UNL2 Q9UNL2 103 110 SSR3 Translocon-associated protein subunit gamma yes yes 2 0.00011559 152.34 By MS/MS 9 0 1 1 0 0 0 7411 2790 7657 18359 14810 14810 1 0 0 KLSEADNRK VAQKREDAVSKEVTRKLSEADNRKMSRKEK SKEVTRKLSEADNRKMSRKEKDERILWKKN R K L R K M 1 1 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 9 2 1059.5673 Q9UNL2 Q9UNL2 103 111 SSR3 Translocon-associated protein subunit gamma yes yes 2 0.010332 129.42 By MS/MS 7 3.56 1 1 1 3 2690200 2690200 0 7412 2790 7658 18360;18361;18362 14811;14812 14812 2 53821 0 KLTPITYPQGLAMAK DLRDDKDTIEKLKEKKLTPITYPQGLAMAK KLTPITYPQGLAMAKEIGAVKYLECSALTQ K K L A K E 2 0 0 0 0 1 0 1 0 1 2 2 1 0 2 0 2 0 1 0 0 0 15 1 1630.9116 P63000 P63000 133 147 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 3 0.0075292 87.863 By MS/MS 9 0 1 1 382300 382300 0 7413 1192 7659 18363 14813 14813 691 1 7523.8 0 KLTPQGQR LEGLKMVEKDQDGGRKLTPQGQRDLDRIAG KDQDGGRKLTPQGQRDLDRIAGQVAAANKK R K L Q R D 0 1 0 0 0 2 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 8 1 926.52976 P39019 P39019 122 129 RPS19 40S ribosomal protein S19 yes yes 2 0.054393 114.5 By MS/MS 10 0 1 1 46623000 46623000 0 7414 853 7660 18364 14814 14814 1 2512800 0 KLVESLPQEIK EIKNYIQGINLVQAKKLVESLPQEIKANVA VQAKKLVESLPQEIKANVAKAEAEKIKAAL K K L I K A 0 0 0 0 0 1 2 0 0 1 2 2 0 0 1 1 0 0 0 1 0 0 11 1 1282.7497 P52815 P52815 163 173 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 1.4635E-05 178.54 By MS/MS By matching 9 0 2 1 1 11309000 11251000 58041 7415 1024 7661 18365;18366 14815 14815 1 221420 132350 KLVIVGDGACGK ______________________________ IRKKLVIVGDGACGKTCLLIVFSKDQFPEV K K L G K T 1 0 0 1 1 0 0 3 0 1 1 2 0 0 0 0 0 0 0 2 0 0 12 1 1215.6645 P61586;P08134 P61586 7 18 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.0001747 167.12 By MS/MS 9 0 1 1 417430 417430 0 7416 1125;518 7662 18367 14816 14816 1 8215.1 0 KLVWVPSDK NFINNPLAQADWAAKKLVWVPSDKSGFEPA ADWAAKKLVWVPSDKSGFEPASLKEEVGEE K K L D K S 0 0 0 1 0 0 0 0 0 0 1 2 0 0 1 1 0 1 0 2 0 0 9 1 1070.6124 P35579 P35579 30 38 MYH9 Myosin-9 yes yes 2 0.0076004 118.5 By MS/MS 2 0 1 1 377600 377600 0 7417 824 7663 18368 14817 14817 1 127720 0 KLYDIDVAK VDVKANKHQIKQAVKKLYDIDVAKVNTLIR IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV K K L A K V 1 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 9 1 1063.5914 P62750 P62750 115 123 RPL23A 60S ribosomal protein L23a yes yes 2 0.0067284 121.73 By MS/MS 9 0 1 1 3744500 3744500 0 7418 1168 7664 18369 14818 14818 1 73693 0 KLYDSAFHPDTGEK VVPPGTQVEQLLYAKKLYDSAFHPDTGEKM KKLYDSAFHPDTGEKMNVIGRMSFQLPGGM K K L E K M 1 0 0 2 0 0 1 1 1 0 1 2 0 1 1 1 1 0 1 0 0 0 14 1 1606.7627 Q96NB2 Q96NB2 72 85 SFXN2 Sideroflexin-2 yes yes 3 0.00082823 121.42 By MS/MS 8 0 1 1 1921900 1921900 0 7419 2202 7665 18370 14819 14819 1 24264 0 KLYPTVGKPSSS PIDRSVDFLLDSSLRKLYPTVGKPSSS___ SLRKLYPTVGKPSSS_______________ R K L S S - 0 0 0 0 0 0 0 1 0 0 1 2 0 0 2 3 1 0 1 1 0 0 12 2 1262.6871 Q9UDX5 Q9UDX5 155 166 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.033186 105.4 By MS/MS 9 0 1 1 1329100 1329100 0 7420 2711 7666 18371 14820 14820 1 26157 0 KMEEVKEANIR SLCISTKKEVEKMNKKMEEVKEANIRVVSE KMNKKMEEVKEANIRVVSEDFLQDVSASTK K K M I R V 1 1 1 0 0 0 3 0 0 1 0 2 1 0 0 0 0 0 0 1 0 0 11 2 1345.7024 P09874 P09874 442 452 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.011798 99.752 By MS/MS 3.67 0.471 1 2 3 2540800 2540800 0 7421 543 7667;7668 18372;18373;18374 14821;14822 14821 238 2 200430 0 KMTTSTDHLK RPHIFEDPFSINSGKKMTTSTDHLKRGTIL INSGKKMTTSTDHLKRGTILDCNTCKFATI K K M L K R 0 0 0 1 0 0 0 0 1 0 1 2 1 0 0 1 3 0 0 0 0 0 10 1 1160.586 P56199 P56199 1046 1055 ITGA1 Integrin alpha-1 yes yes 2 0.049034 63.419 By MS/MS 8 0 1 1 389810 389810 0 7422 1068 7669 18375 14823 14823 600 0 4921.3 0 KNAAHAIQK LAIKEASADLSPYVRKNAAHAIQKLYSLDP LSPYVRKNAAHAIQKLYSLDPEQKEMLIEV R K N Q K L 3 0 1 0 0 1 0 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 979.55631 O00203 O00203 168 176 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.014375 110.81 By MS/MS 4 0 1 1 0 0 0 7423 90 7670 18376 14824 14824 1 0 0 KNADLNAQTVVK SESSDFNERRERDEKKNADLNAQTVVKVGE DEKKNADLNAQTVVKVGENVLPPKREIAKR K K N V K V 2 0 2 1 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 12 1 1299.7147 Q9Y520 Q9Y520 1515 1526 PRRC2C Protein PRRC2C yes yes 2;3 0.00099787 163.46 By MS/MS 1.8 0.748 2 2 1 5 984000 984000 0 7424 2905 7671 18377;18378;18379;18380;18381 14825;14826;14827 14825 3 268670 0 KNDLVDADNKNLVR LEGSEVRTIVINYAKKNDLVDADNKNLVRL KKNDLVDADNKNLVRLDPILCDCILEKNEQ K K N V R L 1 1 3 3 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 2 0 0 14 2 1612.8533 P41214 P41214 421 434 EIF2D Eukaryotic translation initiation factor 2D yes yes 3 0.00036822 142.39 By MS/MS 5 0 1 1 1544100 1544100 0 7425 867 7672 18382 14828 14828 1 15486 0 KNEELSVLLK TEARTLASMLREVERKNEELSVLLKAQQVE REVERKNEELSVLLKAQQVESERAQSDIEH R K N L K A 0 0 1 0 0 0 2 0 0 0 3 2 0 0 0 1 0 0 0 1 0 0 10 1 1171.6812 Q8TCG1 Q8TCG1 685 694 KIAA1524 Protein CIP2A yes yes 2 0.0039812 120.45 By MS/MS 4 0 1 1 2185900 2185900 0 7426 1990 7673 18383 14829 14829 1 205710 0 KNEGYMR GTYGGYFRDQKDGYRKNEGYMRRGGYRQQQ RDQKDGYRKNEGYMRRGGYRQQQSQTAY__ R K N M R R 0 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 7 1 896.41744 Q99613;B5ME19 Q99613 894 900 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.035397 128.48 By MS/MS 4.5 0.5 1 1 2 854320 854320 0 7427 2252 7674 18384;18385 14830 14830 1044 1 75768 0 KNHEEEMKDLR EMQIESLTEELAYLKKNHEEEMKDLRNVST AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K K N L R N 0 1 1 1 0 0 3 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 11 2 1427.6827 CON__P13645;P13645 CON__P13645 285 295 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.00077595 150.04 By MS/MS By MS/MS 3.4 1.36 1 3 1 1 4 5613400 0 5613400 + 7428 50 7675;7676 18386;18387;18388;18389;18390 14831;14832;14833;14834;14835 14835 35 5 0 826970 KNHLEGK LLQSKDQITAGNAARKNHLEGKAAISNKIT ITAGNAARKNHLEGKAAISNKITSCIFQLL R K N G K A 0 0 1 0 0 0 1 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 7 1 824.45045 P22234 P22234 47 53 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.031128 138.83 By MS/MS 7 0 1 1 1601900 1601900 0 7429 689 7677 18391 14836 14836 1 25147 0 KNKEEAAEYAK QHKRRRIALKKQRTKKNKEEAAEYAKLLAK QRTKKNKEEAAEYAKLLAKRMKEAKEKRQE K K N A K L 3 0 1 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 11 2 1279.6408 P62753 P62753 201 211 RPS6 40S ribosomal protein S6 yes yes 2;3 2.2745E-18 270.36 By MS/MS 8 0 2 2 1241200 1241200 0 7430 1169 7678 18392;18393 14837;14838 14837 2 15670 0 KNLTQDEMQR ASTLHRLYHLSREMRKNLTQDEMQRMSTRV SREMRKNLTQDEMQRMSTRVLLATLSIPIT R K N Q R M 0 1 1 1 0 2 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 10 1 1261.6085 Q14152 Q14152 308 317 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 8.3508E-11 223.36 By MS/MS 3 0 2 2 1551500 1551500 0 7431 1422 7679;7680 18394;18395 14839;14840 14840 817 2 28387 0 KNPAAYENDK LIYTWGTEEFERSKRKNPAAYENDK_____ ERSKRKNPAAYENDK_______________ R K N D K - 2 0 2 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 10 1 1148.5462 O14949 O14949 73 82 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 2 0.0039812 120.45 By MS/MS By matching 10 0 2 1 1 1153000 1129900 23052 7432 147 7681 18396;18397 14841 14841 1 60899 29513 KNPLPPSVGVVDK NAAGKQLRKESQKDRKNPLPPSVGVVDKKE DRKNPLPPSVGVVDKKEETQPPVALKKEGI R K N D K K 0 0 1 1 0 0 0 1 0 0 1 2 0 0 3 1 0 0 0 3 0 0 13 1 1348.7715 Q8NC51 Q8NC51 79 91 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.005529 115 By MS/MS 6 0 1 1 1445900 1445900 0 7433 1946 7682 18398 14842 14842 1 9939.4 0 KNPLPPSVGVVDKK NAAGKQLRKESQKDRKNPLPPSVGVVDKKE RKNPLPPSVGVVDKKEETQPPVALKKEGIR R K N K K E 0 0 1 1 0 0 0 1 0 0 1 3 0 0 3 1 0 0 0 3 0 0 14 2 1476.8664 Q8NC51 Q8NC51 79 92 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 0.00084057 125.47 By MS/MS 6 0 1 1 2885400 2885400 0 7434 1946 7683 18399 14843 14843 1 19835 0 KNVESFLEACR VPSPAVPKLSALKARKNVESFLEACRKMGV LKARKNVESFLEACRKMGVPEADLCSPSDL R K N C R K 1 1 1 0 1 0 2 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 1 1351.6554 O75427 O75427 602 612 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.00087485 138.25 By MS/MS 5 0 1 1 1211800 1211800 0 7435 326 7684 18400 14844 14844 1 12154 0 KNVPTSK SQILRLRHTAFVIPKKNVPTSKRETYTEDF HTAFVIPKKNVPTSKRETYTEDFIKKQIEE K K N S K R 0 0 1 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 7 1 772.4443 P82933 P82933 59 65 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.036322 133.81 By MS/MS 7 0 1 1 1774800 1774800 0 7436 1239 7685 18401 14845 14845 1 27861 0 KNYCNIQVTK QPNDFFPVQVSFVSKKNYCNIQVTKVTQVD SFVSKKNYCNIQVTKVTQVDGNSPVRFSTE K K N T K V 0 0 2 0 1 1 0 0 0 1 0 2 0 0 0 0 1 0 1 1 0 0 10 1 1266.6391 P48444 P48444 476 485 ARCN1 Coatomer subunit delta yes yes 2 0.00037664 153.24 By MS/MS 6 0 1 1 1561600 1561600 0 7437 934 7686 18402 14846 14846 1 10735 0 KPAAAAAPGTAEK SAFCLLEAALAAEVKKPAAAAAPGTAEKLS VKKPAAAAAPGTAEKLSPKAATLAERSAGL K K P E K L 6 0 0 0 0 0 1 1 0 0 0 2 0 0 2 0 1 0 0 0 0 0 13 1 1181.6404 P50454 P50454 23 35 SERPINH1 Serpin H1 yes yes 2 0.0031563 127.52 By MS/MS 6.5 0.5 1 1 2 694200 694200 0 7438 975 7687 18403;18404 14847;14848 14847 2 8374.3 0 KPAEQAEETAPIEATATKEEEGSS LYPQEDEDEEEEREKKPAEQAEETAPIEAT APIEATATKEEEGSS_______________ K K P S S - 5 0 0 0 0 1 7 1 0 1 0 2 0 0 2 2 3 0 0 0 0 0 24 2 2502.1609 Q8N4Q1 Q8N4Q1 119 142 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 3 2.1534E-07 119.66 By MS/MS 9 0 1 1 842180 842180 0 7439 1918 7688 18405 14849;14850 14849 2 16574 0 KPALELLHYLK VMQVKTFSEACLMVRKPALELLHYLKNTSF LMVRKPALELLHYLKNTSFAYPAIRYLLYG R K P L K N 1 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 0 1 0 0 0 11 1 1323.7915 P51398 P51398 103 113 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.0076584 84.821 By MS/MS 7 0 1 1 702580 702580 0 7440 993 7689 18406 14851 14851 0 11029 0 KPASFMTSICDER VPMDYSWARELGLIRKPASFMTSICDERGQ IRKPASFMTSICDERGQELIYAGMPITEVF R K P E R G 1 1 0 1 1 0 1 0 0 1 0 1 1 1 1 2 1 0 0 0 0 0 13 1 1540.7014 P53396 P53396 836 848 ACLY ATP-citrate synthase yes yes 2;3 0.0013895 141.34 By MS/MS 4 0 2 2 3802100 3802100 0 7441 1030 7690 18407;18408 14852;14853 14853 2 357800 0 KPDAYTEQLHNEEENEDAR LLYMAFLMLVDPLIRKPDAYTEQLHNEEEN YTEQLHNEEENEDARSMAAAAASLGGPRAN R K P A R S 2 1 2 2 0 1 5 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 19 1 2286.9989 Q9P0T7 Q9P0T7 118 136 TMEM9 Transmembrane protein 9 yes yes 3 3.8845E-05 179.07 By MS/MS 8 0.816 1 1 1 3 1830000 1830000 0 7442 2670 7691 18409;18410;18411 14854;14855;14856 14854 3 29659 0 KPEDWDERPK PPVNPSREIEDPEDRKPEDWDERPKIPDPE DPEDRKPEDWDERPKIPDPEAVKPDDWDED R K P P K I 0 1 0 2 0 0 2 0 0 0 0 2 0 0 2 0 0 1 0 0 0 0 10 2 1298.6255 P27824 P27824 283 292 CANX Calnexin yes yes 3 0.031772 88.134 By MS/MS 4 0 1 1 0 0 0 7443 747 7692 18412 14857 14857 1 0 0 KPEENPASK DGKKDQDSRSAPEPKKPEENPASKFSSASK SAPEPKKPEENPASKFSSASKYAALSVDGE K K P S K F 1 0 1 0 0 0 2 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 9 1 998.50327 P23588 P23588 578 586 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0013034 150.36 By MS/MS 9 0 1 1 298910 298910 0 7444 708 7693 18413 14858 14858 1 5882.6 0 KPESNAVTK RAKVEKKTEAAATTRKPESNAVTKTAGPIA AAATTRKPESNAVTKTAGPIASAQKQPAGK R K P T K T 1 0 1 0 0 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 9 1 972.52401 P27816 P27816 968 976 MAP4 Microtubule-associated protein 4 yes yes 2 0.0020819 143.37 By MS/MS 2.5 0.5 1 1 2 503000 503000 0 7445 746 7694 18414;18415 14859 14859 1 138070 0 KPGDLSDELR LYYEGKEFETRLKEKKPGDLSDELRISLGM RLKEKKPGDLSDELRISLGMPVGPNAHKVP K K P L R I 0 1 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1128.5775 Q13435 Q13435 605 614 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0050519 114.4 By MS/MS 3 0 1 1 1603700 1603700 0 7446 1384 7695 18416 14860 14860 1 29344 0 KPHTESLELQVR TSAPVWDESASFLIRKPHTESLELQVRGEG LIRKPHTESLELQVRGEGTGVLGSLSLPLS R K P V R G 0 1 0 0 0 1 2 0 1 0 2 1 0 0 1 1 1 0 0 1 0 0 12 1 1435.7783 Q9BSJ8 Q9BSJ8 855 866 ESYT1 Extended synaptotagmin-1 yes yes 3 4.6119E-06 182.23 By MS/MS 4 0.816 1 1 1 3 2185100 2185100 0 7447 2308 7696 18417;18418;18419 14861 14861 1 59545 0 KPIGADSK KCFDKFCANTCVECRKPIGADSKEVHYKNR NTCVECRKPIGADSKEVHYKNRFWHDTCFR R K P S K E 1 0 0 1 0 0 0 1 0 1 0 2 0 0 1 1 0 0 0 0 0 0 8 1 814.45487 Q13642 Q13642 45 52 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.021602 119.41 By MS/MS 9 0.816 1 1 1 3 867490 867490 0 7448 1407 7697 18420;18421;18422 14862 14862 1 16742 0 KPITDDDVDRISLCLK LMATILHLGKSSLPKKPITDDDVDRISLCL PITDDDVDRISLCLKVLSECSPLMNDIFNK K K P L K V 0 1 0 4 1 0 0 0 0 2 2 2 0 0 1 1 1 0 0 1 0 0 16 2 1886.9772 P53618 P53618 603 618 COPB1 Coatomer subunit beta yes yes 3 0.0011034 113.43 By MS/MS 4 0 1 1 3008400 3008400 0 7449 1033 7698 18423 14863 14863 1 283110 0 KPLNKEGK FNLSKEDDVRQYVVRKPLNKEGKKPRTKAP VRQYVVRKPLNKEGKKPRTKAPKIQRLVTP R K P G K K 0 0 1 0 0 0 1 1 0 0 1 3 0 0 1 0 0 0 0 0 0 0 8 2 912.53927 P62753 P62753 160 167 RPS6 40S ribosomal protein S6 yes yes 2 0.014466 129.47 By MS/MS 8 0 1 1 363360 363360 0 7450 1169 7699 18424 14864 14864 1 4587.3 0 KPLPDHVSIVEPK KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE PKKPLPDHVSIVEPKDEILPTTPISEQKGG K K P P K D 0 0 0 1 0 0 1 0 1 1 1 2 0 0 3 1 0 0 0 2 0 0 13 1 1457.8242 P23396 P23396 202 214 RPS3 40S ribosomal protein S3 yes yes 2;3 9.0365E-06 194.06 By MS/MS 8 0 3 3 10987000 10987000 0 7451 703 7700 18425;18426;18427 14865;14866;14867;14868 14865 4 138710 0 KPLPDHVSIVEPKDEILPTTPISEQK KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE PKDEILPTTPISEQKGGKPEPPAMPQPVPT K K P Q K G 0 0 0 2 0 1 3 0 1 3 2 3 0 0 5 2 2 0 0 2 0 0 26 2 2909.575 P23396 P23396 202 227 RPS3 40S ribosomal protein S3 yes yes 4 0.024297 47.288 By MS/MS 8 0 1 1 1936400 1936400 0 7452 703 7701 18428 14869 14869 1 24447 0 KPNEGADGQWK AIQNKDRAKVEFNIRKPNEGADGQWKKGFV FNIRKPNEGADGQWKKGFVLHKSKSEEAHA R K P W K K 1 0 1 1 0 1 1 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 11 1 1228.5836 Q8NC51 Q8NC51 310 320 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 1.226E-08 210.64 By MS/MS 6 0 1 1 1950900 1950900 0 7453 1946 7702 18429 14870;14871 14870 2 13411 0 KPPLLNNADSVQAK SNRFYTLIPHDFGMKKPPLLNNADSVQAKV KKPPLLNNADSVQAKVEMLDNLLDIEVAYS K K P A K V 2 0 2 1 0 1 0 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 14 1 1493.8202 P09874 P09874 748 761 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.00028685 160.56 By MS/MS 3.5 0.5 2 2 4 5530400 5530400 0 7454 543 7703 18430;18431;18432;18433 14872;14873;14874;14875 14874 3 443810 0 KPSPQEVSELQATYR YTPHRGRLWIAATAKKPSPQEVSELQATYR KPSPQEVSELQATYRLLRGKDVEFPNDYPS K K P Y R L 1 1 0 0 0 2 2 0 0 0 1 1 0 0 2 2 1 0 1 1 0 0 15 1 1731.8792 Q15650 Q15650 475 489 TRIP4 Activating signal cointegrator 1 yes yes 3 0.027287 97.2 By MS/MS 5 0 1 1 1427400 1427400 0 7455 1523 7704 18434 14876 14876 1 14316 0 KPTFMDEEVQSILTK RFSSEAAESGSPETKKPTFMDEEVQSILTK KPTFMDEEVQSILTKMTGLNLQKTFKPAIQ K K P T K M 0 0 0 1 0 1 2 0 0 1 1 2 1 1 1 1 2 0 0 1 0 0 15 1 1764.8968 P82650 P82650 67 81 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.00054773 127.18 By MS/MS 7 0 1 1 219660 219660 0 7456 1229 7705 18435 14877 14877 1 3448.3 0 KPTLDKPSPETFVK SVLPYFVATKLAKIRKPTLDKPSPETFVKS RKPTLDKPSPETFVKSAIKTVGLQSRTNGY R K P V K S 0 0 0 1 0 0 1 0 0 0 1 3 0 1 3 1 2 0 0 1 0 0 14 2 1585.8716 Q53GQ0 Q53GQ0 244 257 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 4.3474E-23 264.3 By MS/MS 8 0 2 2 14662000 14662000 0 7457 1587 7706 18436;18437 14878;14879 14879 2 185110 0 KPVAGALDVSFNK QGWQADSTTRMVLPRKPVAGALDVSFNKFI PRKPVAGALDVSFNKFIPLSEPAPVPPIPN R K P N K F 2 0 1 1 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 13 1 1344.7402 Q99627 Q99627 166 178 COPS8 COP9 signalosome complex subunit 8 yes yes 2 8.7161E-05 185.3 By MS/MS 9 0 1 1 964770 964770 0 7458 2255 7707 18438 14880 14880 1 18987 0 KPVEELTEEEKYVR SPEFKDPLIDKEYYRKPVEELTEEEKYVRE RKPVEELTEEEKYVRELKKTQLIKAAPAGK R K P V R E 0 1 0 0 0 0 5 0 0 0 1 2 0 0 1 0 1 0 1 2 0 0 14 2 1747.8992 Q9Y2R9 Q9Y2R9 53 66 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2;3 8.1233E-08 226.42 By MS/MS 8.33 0.471 2 1 3 31682000 31682000 0 7459 2841 7708 18439;18440;18441 14881;14882 14882 2 401420 0 KPVIVFVPSR MAKPVYHAITKHSPKKPVIVFVPSRKQTRL KHSPKKPVIVFVPSRKQTRLTAIDILTTCA K K P S R K 0 1 0 0 0 0 0 0 0 1 0 1 0 1 2 1 0 0 0 3 0 0 10 1 1140.7019 O75643 O75643 1557 1566 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.033665 94.692 By MS/MS 1.5 0.5 1 1 2 632640 632640 0 7460 340 7709 18442;18443 14883 14883 1 199840 0 KPVSIVSPEPGTTR PPNAGKSSLVNLLSRKPVSIVSPEPGTTRD RKPVSIVSPEPGTTRDVLETPVDLAGFPVL R K P T R D 0 1 0 0 0 0 1 1 0 1 0 1 0 0 3 2 2 0 0 2 0 0 14 1 1466.8093 Q969Y2 Q969Y2 272 285 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2;3 0.0049646 97.631 By MS/MS 6.75 0.829 2 1 1 4 3288600 3288600 0 7461 2098 7710 18444;18445;18446;18447 14884;14885 14884 1 31165 0 KPVTVHSR RQQIRKLIKDGLIIRKPVTVHSRARCRKNT KDGLIIRKPVTVHSRARCRKNTLARRKGRH R K P S R A 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 2 0 0 8 1 922.53485 P84098 P84098 53 60 RPL19 60S ribosomal protein L19 yes yes 2 0.007441 141.52 By MS/MS 8 0 1 1 1020300 1020300 0 7462 1247 7711 18448 14886 14886 1 12881 0 KPVTVSPTTPTSPTEGEAS KPVLDVHAELDRITRKPVTVSPTTPTSPTE VSPTTPTSPTEGEAS_______________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 Q9Y6G9 Q9Y6G9 505 523 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 5.3011E-07 220.32 By MS/MS 6.5 0.5 1 1 2 7047700 7047700 0 7463 2943 7712 18449;18450 14887 14887 1 52823 0 KQALYEYAR FAKSSWARQESLQERKQALYEYARRRFTER ESLQERKQALYEYARRRFTERRAQEAD___ R K Q A R R 2 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 9 1 1140.5928 Q9Y679 Q9Y679 390 398 AUP1 Ancient ubiquitous protein 1 yes yes 2;3 0.0043252 130.66 By MS/MS 7.33 0.471 2 1 3 5844500 5844500 0 7464 2934 7713 18451;18452;18453 14888;14889 14888 2 90972 0 KQDADSLQR GLTVVVAFRELVEPRKQDADSLQRAWTVGW ELVEPRKQDADSLQRAWTVGWCVELLQAFF R K Q Q R A 1 1 0 2 0 2 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 1 1059.5309 P14324 P14324 142 150 FDPS Farnesyl pyrophosphate synthase yes yes 2 0.0081331 116.52 By MS/MS 7 0 1 1 728560 728560 0 7465 612 7714 18454 14890 14890 1 11437 0 KQDAFYKEQLAR KHLARQLEEKDRVLKKQDAFYKEQLARLEE VLKKQDAFYKEQLARLEERSSEFYRVTTEQ K K Q A R L 2 1 0 1 0 2 1 0 0 0 1 2 0 1 0 0 0 0 1 0 0 0 12 2 1495.7783 Q9NX63 Q9NX63 136 147 CHCHD3 MICOS complex subunit MIC19 yes yes 3 0.010293 89.46 By MS/MS 8 0 1 1 2192900 2192900 0 7466 2621 7715 18455 14891 14891 1 27685 0 KQEAEWKEK EEQMERLEALDANSRKQEAEWKEKAIKELE LDANSRKQEAEWKEKAIKELEEWYARQDEQ R K Q E K A 1 0 0 0 0 1 3 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 9 2 1174.5982 P09496 P09496 130 138 CLTA Clathrin light chain A yes yes 3 0.0081389 117.53 By MS/MS 8 0 1 1 494000 494000 0 7467 536 7716 18456 14892 14892 1 6236.8 0 KQEEDEENKPK KRKEKRKKKKEEQKRKQEEDEENKPKENSE EQKRKQEEDEENKPKENSELPEDEDEEEND R K Q P K E 0 0 1 1 0 1 4 0 0 0 0 3 0 0 1 0 0 0 0 0 0 0 11 2 1372.647 Q8IWZ3 Q8IWZ3 1470 1480 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.0039729 131.09 By MS/MS 2 0 1 1 40754 40754 0 7468 1872 7717 18457 14893 14893 1 13785 0 KQEEELTKR IERRKTGKEMLDYKRKQEEELTKRMLEERN MLDYKRKQEEELTKRMLEERNREKAEDRAA R K Q K R M 0 1 0 0 0 1 3 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 9 2 1159.6197 Q92575 Q92575 241 249 UBXN4 UBX domain-containing protein 4 yes yes 2;3 0.0017736 134.23 By MS/MS 5.8 0.748 2 2 1 5 1758000 1758000 0 7469 2058 7718 18458;18459;18460;18461;18462 14894;14895 14894 2 17060 0 KQEESVQKQEAMR DQLKQQQLLNEENLRKQEESVQKQEAMRRA LRKQEESVQKQEAMRRATVEREMELRHKNE R K Q M R R 1 1 0 0 0 3 3 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 13 2 1589.7832 Q9NVI7;Q5T9A4 Q5T9A4 158 170 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 3 0.0014406 113.69 By MS/MS By matching 5.25 0.433 3 1 3 1 5376900 5366100 10808 7470 2598;1638 7719;7720 18463;18464;18465;18466 14896;14897 14897 894 2 51995 9076.2 KQEGTPEGLYL TNEDFKKSKENVLYKKQEGTPEGLYL____ VLYKKQEGTPEGLYL_______________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.032471 92.051 By MS/MS 6.5 0.5 1 1 2 4712400 4712400 0 7471 1141 7721 18467;18468 14898 14898 1 34346 0 KQELLEALTK LKEACRAYGLKSGLKKQELLEALTKHFQD_ KSGLKKQELLEALTKHFQD___________ K K Q T K H 1 0 0 0 0 1 2 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 10 1 1171.6812 P12956 P12956 596 605 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.0060317 118.23 By MS/MS 5 0 1 1 0 0 0 7472 596 7722 18469 14899 14899 1 0 0 KQENALKPK QAWQLRQQKLQEEQRKQENALKPKGASLKS LQEEQRKQENALKPKGASLKSPLPSQ____ R K Q P K G 1 0 1 0 0 1 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 9 2 1054.6135 Q86TS9 Q86TS9 104 112 MRPL52 39S ribosomal protein L52, mitochondrial yes yes 2;3 0.0003063 181.55 By MS/MS 10 0 2 2 885230 885230 0 7473 1813 7723 18470;18471 14900;14901 14900 2 47711 0 KQHLEIELK NALQQKACGSEIMQKKQHLEIELKQVMQQR SEIMQKKQHLEIELKQVMQQRSEDNARHKQ K K Q L K Q 0 0 0 0 0 1 2 0 1 1 2 2 0 0 0 0 0 0 0 0 0 0 9 1 1136.6554 P15924 P15924 1288 1296 DSP Desmoplakin yes yes 3 0.028522 113.71 By MS/MS 3 0 1 1 389820 0 389820 7474 628 7724 18472 14902 14902 1 0 49619 KQHLVEVR EPAVIEAQNAVKSIKKQHLVEVRSMANPPA NAVKSIKKQHLVEVRSMANPPAAVKLALES K K Q V R S 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 8 1 1007.5876 Q14204 Q14204 3301 3308 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.04348 77.318 By MS/MS 1 0 1 1 287410 287410 0 7475 1433 7725 18473 14903 14903 1 69256 0 KQHSLLK YSARQRRRLNRGLRRKQHSLLKRLRKAKKE RLNRGLRRKQHSLLKRLRKAKKEAPPMEKP R K Q L K R 0 0 0 0 0 1 0 0 1 0 2 2 0 0 0 1 0 0 0 0 0 0 7 1 852.51814 P62841 P62841 52 58 RPS15 40S ribosomal protein S15 yes yes 2 0.048455 124.59 By MS/MS 9.5 0.5 1 1 2 8038300 8038300 0 7476 1174 7726 18474;18475 14904;14905 14904 2 175610 0 KQIEAQQNK PKEADIVIKSTEGERKQIEAQQNKQQAISE STEGERKQIEAQQNKQQAISEKDRGNGFFK R K Q N K Q 1 0 1 0 0 3 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 1085.5829 Q9H6T3 Q9H6T3 271 279 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.0012284 151.04 By MS/MS 5 0 1 1 527880 527880 0 7477 2459 7727 18476 14906 14906 1 5294.4 0 KQKEGNFDIVSGTR ADLSHHPKFIPEFIRKQKEGNFDIVSGTRY RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK R K Q T R Y 0 1 1 1 0 1 1 2 0 1 0 2 0 1 0 1 1 0 0 1 0 0 14 2 1577.8162 O60762 O60762 134 147 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 3 0.015043 109.99 By MS/MS 8 0 1 1 1303400 1303400 0 7478 275 7728 18477 14907 14907 1 16455 0 KQKEMDEAATAEER KEFEKDKDDDEVFEKKQKEMDEAATAEERG KKQKEMDEAATAEERGRLKEELEEARDIAR K K Q E R G 3 1 0 1 0 1 4 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 14 2 1634.757 Q04637 Q04637 864 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.0019167 140.31 By MS/MS 2 0 2 2 368510 368510 0 7479 1291 7729;7730 18478;18479 14908;14909 14909 771 2 124650 0 KQLQAIEFNK VKLTNAEGVEFKLSKKQLQAIEFNKALLAM FKLSKKQLQAIEFNKALLAMYTNQAEQCRK K K Q N K A 1 0 1 0 0 2 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 10 1 1217.6768 O76094 O76094 301 310 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.00026144 157.99 By MS/MS 5 0 1 1 1839000 1839000 0 7480 362 7731 18480 14910 14910 1 18444 0 KQLSSQGTVR HAYPDGRLAEPEKPRKQLSSQGTVRFFNSV PEKPRKQLSSQGTVRFFNSVRLWDFIENRE R K Q V R F 0 1 0 0 0 2 0 1 0 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1102.6095 Q9H000 Q9H000 362 371 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 2 0.052748 89.029 By MS/MS 6.5 0.5 1 1 2 1081400 1081400 0 7481 2400 7732 18481;18482 14911 14911 1 12807 0 KQMVIDVLHPGK TIRTRKFMTNRLLQRKQMVIDVLHPGKATV LQRKQMVIDVLHPGKATVPKTEIREKLAKM R K Q G K A 0 0 0 1 0 1 0 1 1 1 1 2 1 0 1 0 0 0 0 2 0 0 12 1 1363.7646 P62847 P62847 21 32 RPS24 40S ribosomal protein S24 yes yes 2;3;4 1.9413E-05 175.49 By MS/MS 9.5 0.5 5 5 10 15963000 15963000 0 7482 1175 7733;7734 18483;18484;18485;18486;18487;18488;18489;18490;18491;18492 14912;14913;14914;14915;14916;14917;14918 14916 678 7 387680 0 KQNVQFMHNR PHQIIMPSAIERSVRKQNVQFMHNRMQYSM ERSVRKQNVQFMHNRMQYSMEYFQFMKKLL R K Q N R M 0 1 2 0 0 2 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 10 1 1300.6459 Q93008 Q93008 1993 2002 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.011852 85.862 By MS/MS 2 0 1 1 135880 135880 0 7483 2085 7735 18493 14919 14919 1005 1 45961 0 KQPALDVLYDVMK ENALKRANEFLEVGKKQPALDVLYDVMKSK GKKQPALDVLYDVMKSKKHRTWQKIHEPIM K K Q M K S 1 0 0 2 0 1 0 0 0 0 2 2 1 0 1 0 0 0 1 2 0 0 13 1 1518.8116 Q14152 Q14152 24 36 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.034928 65.295 By MS/MS 3.5 0.5 1 1 2 297730 297730 0 7484 1422 7736 18494;18495 14920 14920 818 1 16282 0 KQPTPQPPVDCVK ______________________________ QKKQPTPQPPVDCVKTSGGGGGGGGSGGGG K K Q V K T 0 0 0 1 1 2 0 0 0 0 0 2 0 0 4 0 1 0 0 2 0 0 13 1 1492.7708 P23490 P23490 6 18 LOR Loricrin yes yes 3 0.05412 51.135 By MS/MS 7 0.816 1 1 1 3 261680 0 261680 7485 705 7737 18496;18497;18498 14921 14921 0 0 360260 KQQISLATQMVR NDMKQQHVIETLIGKKQQISLATQMVRMIL IGKKQQISLATQMVRMILKIDDIRKPGESE K K Q V R M 1 1 0 0 0 3 0 0 0 1 1 1 1 0 0 1 1 0 0 1 0 0 12 1 1401.7762 P48643 P48643 514 525 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.005154 95.273 By MS/MS 6 0 1 1 1421600 1421600 0 7486 940 7738 18499 14922 14922 1 9772.1 0 KQQLEVELR DIQQQKATGSEVSQRKQQLEVELRQVTQMR SEVSQRKQQLEVELRQVTQMRTEESVRYKQ R K Q L R Q 0 1 0 0 0 2 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 1 1141.6455 P15924 P15924 1444 1452 DSP Desmoplakin yes yes 2 0.021042 107.21 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 2327900 2287300 40650 7487 628 7739 18500;18501;18502;18503;18504;18505 14923 14923 1 330190 40650 KQQSIAGSADSKPIDVSR KAKEKIEKKGEKKEKKQQSIAGSADSKPID SIAGSADSKPIDVSRLDLRIGCIITARKHP K K Q S R L 2 1 0 2 0 2 0 1 0 2 0 2 0 0 1 4 0 0 0 1 0 0 18 2 1885.9858 Q12904 Q12904 137 154 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 3 0.00017329 142.94 By MS/MS 7 0 1 1 2363900 2363900 0 7488 1337 7740 18506 14924 14924 1 37109 0 KQSGGAGQYGK RETITAPVPFDFTHKKQSGGAGQYGKVIGV FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK K K Q G K V 1 0 0 0 0 2 0 4 0 0 0 2 0 0 0 1 0 0 1 0 0 0 11 1 1079.536 Q96RP9 Q96RP9 541 551 GFM1 Elongation factor G, mitochondrial yes yes 2 0.014178 106.18 By MS/MS 5 0 1 1 354350 354350 0 7489 2223 7741 18507 14925 14925 1 3554 0 KQTALVELLK HADICTLPDTEKQIKKQTALVELLKHKPKA EKQIKKQTALVELLKHKPKATEEQLKTVME K K Q L K H 1 0 0 0 0 1 1 0 0 0 3 2 0 0 0 0 1 0 0 1 0 0 10 1 1141.7071 CON__P02769 CON__P02769 548 557 yes yes 2 0.023378 101.46 By MS/MS 6 0 1 1 2130700 2130700 0 + 7490 43 7742 18508 14926 14926 1 14647 0 KQTHNNAVVK EVKKRMRAEMELGLRKQTHNNAVVKMLPSF ELGLRKQTHNNAVVKMLPSFVRRTPDGTEN R K Q V K M 1 0 2 0 0 1 0 0 1 0 0 2 0 0 0 0 1 0 0 2 0 0 10 1 1137.6255 P19367 P19367 501 510 HK1 Hexokinase-1 yes yes 2;3 6.5994E-07 146.23 By MS/MS 4 0 2 2 264700 264700 0 7491 660 7743 18509;18510 14927;14928 14927 2 24910 0 KQTIGNSCK PECENPETDLHVNPKKQTIGNSCKACGYRG LHVNPKKQTIGNSCKACGYRGMLDTHHKLC K K Q C K A 0 0 1 0 1 1 0 1 0 1 0 2 0 0 0 1 1 0 0 0 0 0 9 1 1034.5179 P55010 P55010 115 123 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.0050078 128.12 By MS/MS 6 0 1 1 905340 905340 0 7492 1050 7744 18511 14929 14929 1 6223.5 0 KQVEEIFNLK TPVKEDWNVRITKLRKQVEEIFNLKFAQAL ITKLRKQVEEIFNLKFAQALGLTEAVKVPY R K Q L K F 0 0 1 0 0 1 2 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1246.6921 P78347 P78347 573 582 GTF2I General transcription factor II-I yes yes 2 4.2271E-06 192.26 By MS/MS 3 0 1 1 455710 455710 0 7493 1221 7745 18512 14930 14930 1 8338.2 0 KQVFTSEK EAKLSSFWQLIVDEKKQVFTSEKFLVMASE QLIVDEKKQVFTSEKFLVMASEDALCTVLH K K Q E K F 0 0 0 0 0 1 1 0 0 0 0 2 0 1 0 1 1 0 0 1 0 0 8 1 965.5182 Q92616 Q92616 522 529 GCN1L1 Translational activator GCN1 yes yes 2 0.0048011 148.99 By MS/MS 2.5 0.5 1 1 2 905390 905390 0 7494 2064 7746 18513;18514 14931 14931 1 261120 0 KQVVNIPSFIVR HHARVLIRQRHIRVRKQVVNIPSFIVRLDS RVRKQVVNIPSFIVRLDSQKHIDFSLRSPY R K Q V R L 0 1 1 0 0 1 0 0 0 2 0 1 0 1 1 1 0 0 0 3 0 0 12 1 1398.8347 P46781 P46781 139 150 RPS9 40S ribosomal protein S9 yes yes 2;3 0.00044128 155.11 By MS/MS 8.67 0.471 1 2 3 2222200 2222200 0 7495 918 7747 18515;18516;18517 14932;14933 14933 2 43245 0 KQYDQFGDDKSQAAR AIGTAYAVLSNPEKRKQYDQFGDDKSQAAR KQYDQFGDDKSQAARHGHGHGDFHRGFEAD R K Q A R H 2 1 0 3 0 3 0 1 0 0 0 2 0 1 0 1 0 0 1 0 0 0 15 2 1755.8176 Q9NXW2 Q9NXW2 168 182 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 3 0.00076533 125.33 By MS/MS 7 0 1 1 1580000 1580000 0 7496 2630 7748 18518 14934 14934 1 24803 0 KQYDSFTYR YVEDPQGNTIYRETKKQYDSFTYRAEVKGV IYRETKKQYDSFTYRAEVKGVYQFCFSNEF K K Q Y R A 0 1 0 1 0 1 0 0 0 0 0 1 0 1 0 1 1 0 2 0 0 0 9 1 1206.5669 Q9Y3Q3 Q9Y3Q3 83 91 TMED3 Transmembrane emp24 domain-containing protein 3 yes yes 2 0.03264 101.25 By MS/MS 9 0 1 1 158680 158680 0 7497 2882 7749 18519 14935 14935 1 3122.8 0 KRAEFTVETR RAYGPGIEPTGNMVKKRAEFTVETRSAGQG GNMVKKRAEFTVETRSAGQGEVLVYVEDPA K K R T R S 1 2 0 0 0 0 2 0 0 0 0 1 0 1 0 0 2 0 0 1 0 0 10 2 1235.6622 P21333 P21333 300 309 FLNA Filamin-A yes yes 3 0.033251 75.566 By MS/MS 2 0 1 1 0 0 0 7498 677 7750 18520 14936 14936 1 0 0 KREEFIQK PENGVELSKEELIRRKREEFIQKHGRGMEK KEELIRRKREEFIQKHGRGMEKSNKSTKSD R K R Q K H 0 1 0 0 0 1 2 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 8 2 1076.5978 P08240 P08240 213 220 SRPR Signal recognition particle receptor subunit alpha yes yes 3 0.026366 89.752 By MS/MS 5 0 1 1 755160 755160 0 7499 522 7751 18521 14937 14937 1 7573.9 0 KREELSNVLAAMR KFIKKRVGTHIRAKRKREELSNVLAAMRKA KRKREELSNVLAAMRKAAAKKD________ R K R M R K 2 2 1 0 0 0 2 0 0 0 2 1 1 0 0 1 0 0 0 1 0 0 13 2 1515.8191 Q9Y3U8 Q9Y3U8 86 98 RPL36 60S ribosomal protein L36 yes yes 3 0.005771 105.65 By MS/MS 10 0 1 1 399400 399400 0 7500 2885 7752 18522 14938 14938 1193 1 21526 0 KREESYLSNSQTPER ALRSRYEALKKSLSKKREESYLSNSQTPER KREESYLSNSQTPERHKPELSPTPQNVQTD K K R E R H 0 2 1 0 0 1 3 0 0 0 1 1 0 0 1 3 1 0 1 0 0 0 15 2 1822.881 Q7Z4H7 Q7Z4H7 847 861 HAUS6 HAUS augmin-like complex subunit 6 yes yes 3 0.00030112 169.98 By MS/MS 4 0 1 1 572980 572980 0 7501 1792 7753 18523 14939 14939 1 53921 0 KREYENELAK EIERLRVLLQEEGTRKREYENELAKVRNHY EEGTRKREYENELAKVRNHYNEEMSNLRNK R K R A K V 1 1 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 2 1278.6568 P15924 P15924 1185 1194 DSP Desmoplakin yes yes 2;3 0.003187 118.03 By MS/MS By MS/MS 3.22 0.916 2 4 2 1 6 3 4735700 2393300 2342400 7502 628 7754 18524;18525;18526;18527;18528;18529;18530;18531;18532 14940;14941;14942;14943;14944;14945 14943 6 359640 490460 KRFDTEEEFK SPPIGDLQVFYKESKKRFDTEEEFKKRAYQ YKESKKRFDTEEEFKKRAYQCVVLLQGKNP K K R F K K 0 1 0 1 0 0 3 0 0 0 0 2 0 2 0 0 1 0 0 0 0 0 10 2 1327.6408 P54136 P54136 278 287 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.011027 114.86 By MS/MS 5.33 0.471 2 1 3 4192200 4192200 0 7503 1043 7755 18533;18534;18535 14946;14947 14947 2 41028 0 KRNEDEDSPNK GIRNVPYRIRVRLSRKRNEDEDSPNKLYTL RLSRKRNEDEDSPNKLYTLVTYVPVTTFKN R K R N K L 0 1 2 2 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 11 2 1330.6113 P62899 P62899 91 101 RPL31 60S ribosomal protein L31 yes yes 2 0.0067667 123.75 By MS/MS 10 0 1 1 34994 34994 0 7504 1183 7756 18536 14948 14948 1 1886.1 0 KRNVESGEEELASK PNWDRREPLSLINVRKRNVESGEEELASKL RKRNVESGEEELASKLDHYKAKATRHIFLI R K R S K L 1 1 1 0 0 0 4 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 14 2 1574.79 Q96HS1 Q96HS1 75 88 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 7.0389E-05 180.3 By MS/MS 8 0 1 1 1472600 1472600 0 7505 2168 7757 18537 14949 14949 1 18591 0 KRPSSLER DKHEDNKQEENKENRKRPSSLERRNNRKGN EENKENRKRPSSLERRNNRKGNKGRSKSPR R K R E R R 0 2 0 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 8 2 971.55123 CON__P20930;P20930 CON__P20930 123 130 FLG Filaggrin yes no 2;3 0.007985 110.12 By MS/MS By MS/MS 4.69 2.73 2 3 3 1 1 1 1 1 8 5 20361000 5893000 14468000 + 7506 53 7758 18538;18539;18540;18541;18542;18543;18544;18545;18546;18547;18548;18549;18550 14950;14951;14952 14951 3 380770 2780100 KRPSWFTQN PSEQDQGKRIIERDRKRPSWFTQN______ IIERDRKRPSWFTQN_______________ R K R Q N - 0 1 1 0 0 1 0 0 0 0 0 1 0 1 1 1 1 1 0 0 0 0 9 2 1162.5883 Q9BYC8 Q9BYC8 180 188 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 2 0.010669 128.86 By MS/MS 10 0 1 1 711110 711110 0 7507 2366 7759 18551 14953 14953 1 38326 0 KRQEAVAGR TYDGVFIWKISDFARKRQEAVAGRIPAIFS ISDFARKRQEAVAGRIPAIFSPAFYTSRYG R K R G R I 2 2 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 9 2 1013.573 Q12933 Q12933 364 372 TRAF2 TNF receptor-associated factor 2 yes yes 2 1.6846E-05 152.11 By MS/MS 6 0 1 1 0 0 0 7508 1341 7760 18552 14954 14954 1 0 0 KRVETSEHFR ALTRESTRGSRRTPRKRVETSEHFRIDGPV RRTPRKRVETSEHFRIDGPVISESTPIAET R K R F R I 0 2 0 0 0 0 2 0 1 0 0 1 0 1 0 1 1 0 0 1 0 0 10 2 1287.6684 P42167 P42167 260 269 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 3 0.0067567 141.91 By MS/MS 6.5 0.5 1 1 2 1762900 1762900 0 7509 876 7761 18553;18554 14955 14955 1 13627 0 KRVPDHHPC EVILRVDNIIKAAPRKRVPDHHPC______ IKAAPRKRVPDHHPC_______________ R K R P C - 0 1 0 1 1 0 0 0 2 0 0 1 0 0 2 0 0 0 0 1 0 0 9 2 1144.556 P78371 P78371 527 535 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.0050763 138.83 By MS/MS 6.5 0.957 1 2 2 1 6 18740000 18740000 0 7510 1222 7762 18555;18556;18557;18558;18559;18560 14956;14957;14958 14956 3 131830 0 KSDAEQYLK IKLQSFVKEQLEECRKSDAEQYLKNLYDLY QLEECRKSDAEQYLKNLYDLYTRTTNLSSK R K S L K N 1 0 0 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 9 1 1080.5451 O00471 O00471 297 305 EXOC5 Exocyst complex component 5 yes yes 2 0.021042 107.21 By MS/MS 5 0 1 1 636850 636850 0 7511 108 7763 18561 14959 14959 1 6387.3 0 KSDGIYIINLK GTNLDFQMEQYIYKRKSDGIYIINLKRTWE IYKRKSDGIYIINLKRTWEKLLLAARAIVA R K S L K R 0 0 1 1 0 0 0 1 0 3 1 2 0 0 0 1 0 0 1 0 0 0 11 1 1262.7234 P08865 P08865 42 52 RPSA 40S ribosomal protein SA yes yes 2 1.8336E-18 266.03 By MS/MS 7.67 0.943 2 1 3 17721000 17721000 0 7512 529 7764 18562;18563;18564 14960;14961;14962 14960 3 279880 0 KSDGIYIINLKR GTNLDFQMEQYIYKRKSDGIYIINLKRTWE YKRKSDGIYIINLKRTWEKLLLAARAIVAI R K S K R T 0 1 1 1 0 0 0 1 0 3 1 2 0 0 0 1 0 0 1 0 0 0 12 2 1418.8245 P08865 P08865 42 53 RPSA 40S ribosomal protein SA yes yes 3 6.195E-05 191.53 By MS/MS 7 0 1 1 4390700 4390700 0 7513 529 7765 18565 14963 14963 1 68926 0 KSDIDEIVLVGGSTR TMKPVQKVLEDSDLKKSDIDEIVLVGGSTR KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K K S T R I 0 1 0 2 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 2 0 0 15 1 1587.8468 P11021 P11021 353 367 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 1.1641E-07 267.93 By MS/MS By matching 5.25 0.433 3 1 3 1 19237000 19198000 38334 7514 571 7766 18566;18567;18568;18569 14964;14965;14966 14964 2 190850 32193 KSDPVVSYR CLKDLEEDHACIPIKKSDPVVSYRETVSEE ACIPIKKSDPVVSYRETVSEESNVLCLSKS K K S Y R E 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 2 0 0 1 2 0 0 9 1 1049.5506 P13639 P13639 572 580 EEF2 Elongation factor 2 yes yes 2 0.013892 111.46 By MS/MS 4 0 1 1 0 0 0 7515 602 7767 18570 14967 14967 1 0 0 KSEAPSGESR DEDEDGVSAATFLKKKSEAPSGESRKFLKK TFLKKKSEAPSGESRKFLKKMDDEDEDSED K K S S R K 1 1 0 0 0 0 2 1 0 0 0 1 0 0 1 3 0 0 0 0 0 0 10 1 1046.4993 Q99613;B5ME19 Q99613 200 209 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0010376 140.11 By MS/MS 5.5 1.5 1 1 2 728480 728480 0 7516 2252 7768 18571;18572 14968;14969 14968 2 36863 0 KSEEEIDFLR YQFQSFSQYRCKTAKKSEEEIDFLRSNPKI CKTAKKSEEEIDFLRSNPKIWNVHSVLNVL K K S L R S 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1264.6299 Q9Y262 Q9Y262 207 216 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 4.7781E-08 201.84 By MS/MS By matching 5.23 2.15 2 1 4 2 2 2 12 1 135310000 135140000 176820 7517 2814 7769 18573;18574;18575;18576;18577;18578;18579;18580;18581;18582;18583;18584;18585 14970;14971;14972;14973;14974;14975;14976;14977;14978;14979 14973 10 1707100 148490 KSEEEIDFLRSNPK YQFQSFSQYRCKTAKKSEEEIDFLRSNPKI KKSEEEIDFLRSNPKIWNVHSVLNVLHSLV K K S P K I 0 1 1 1 0 0 3 0 0 1 1 2 0 1 1 2 0 0 0 0 0 0 14 2 1690.8526 Q9Y262 Q9Y262 207 220 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.00037522 144.51 By MS/MS 6 0.816 1 1 1 3 6571800 6571800 0 7518 2814 7770 18586;18587;18588 14980 14980 1 63308 0 KSGVGNIFIK KPVRIMWSQRDPSLRKSGVGNIFIKNLDKS DPSLRKSGVGNIFIKNLDKSIDNKALYDTF R K S I K N 0 0 1 0 0 0 0 2 0 2 0 2 0 1 0 1 0 0 0 1 0 0 10 1 1061.6233 P11940;Q4VXU2;Q96DU9 P11940 95 104 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 2 0.0047032 116.37 By MS/MS 5 0 1 1 3010400 3010400 0 7519 586 7771 18589 14981 14981 1 30193 0 KSHHANSPTAGAAK IPPPDPGEQIFNLPKKSHHANSPTAGAAKS KKSHHANSPTAGAAKSSPAAKPGSTPSRPS K K S A K S 4 0 1 0 0 0 0 1 2 0 0 2 0 0 1 2 1 0 0 0 0 0 14 1 1375.6957 Q15555 Q15555 194 207 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.0045599 119.21 By MS/MS 7 0 1 1 178110 178110 0 7520 1520 7772 18590 14982 14982 1 2795.9 0 KSLESINSR ______________________________ AAKKTKKSLESINSRLQLVMKSGKYVLGYK K K S S R L 0 1 1 0 0 0 1 0 0 1 1 1 0 0 0 3 0 0 0 0 0 0 9 1 1032.5564 P62888 P62888 9 17 RPL30 60S ribosomal protein L30 yes yes 2 0.041578 96.665 By MS/MS 10 0 1 1 1843900 1843900 0 7521 1182 7773 18591 14983 14983 1 99380 0 KSNFSLEDFQHSK DNPSQLIWTSSRSARKSNFSLEDFQHSKGK ARKSNFSLEDFQHSKGKEPYSSSKYATDLL R K S S K G 0 0 1 1 0 1 1 0 1 0 1 2 0 2 0 3 0 0 0 0 0 0 13 1 1565.7474 P56937 P56937 176 188 HSD17B7 3-keto-steroid reductase yes yes 3 0.00013362 163.33 By MS/MS 8 0 1 1 1224200 1224200 0 7522 1076 7774 18592 14984 14984 1 15455 0 KSNFSNSADDIK GENNKPREKSESNKRKSNFSNSADDIKSKK NKRKSNFSNSADDIKSKKKREQSNDIARGF R K S I K S 1 0 2 2 0 0 0 0 0 1 0 2 0 1 0 3 0 0 0 0 0 0 12 1 1324.6259 P45973 P45973 91 102 CBX5 Chromobox protein homolog 5 yes yes 2 0.0084748 110.93 By MS/MS 9 0 1 1 226980 226980 0 7523 905 7775 18593 14985 14985 1 4466.9 0 KSNQIPTEVR VEKDMKKAKEQLKIRKSNQIPTEVRSKAEE QLKIRKSNQIPTEVRSKAEEVVSFVKKNVL R K S V R S 0 1 1 0 0 1 1 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 10 1 1170.6357 Q9BWH2 Q9BWH2 150 159 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 0.034095 94.409 By MS/MS 9.5 0.5 1 1 2 279500 279500 0 7524 2348 7776 18594;18595 14986 14986 1 13190 0 KSQIFSTASDNQPTVTIK VMTKLIPRNTVVPTKKSQIFSTASDNQPTV IFSTASDNQPTVTIKVYEGERPLTKDNHLL K K S I K V 1 0 1 1 0 2 0 0 0 2 0 2 0 1 1 3 3 0 0 1 0 0 18 1 1964.0215 P11021 P11021 447 464 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.00091172 110.34 By MS/MS 5 0 1 1 1769200 1769200 0 7525 571 7777 18596 14987 14987 1 17744 0 KSSTPEEVKK VSDGVIKVFNDMKVRKSSTPEEVKKRKKAV DMKVRKSSTPEEVKKRKKAVLFCLSEDKKN R K S K K R 0 0 0 0 0 0 2 0 0 0 0 3 0 0 1 2 1 0 0 1 0 0 10 2 1131.6136 P23528 P23528 22 31 CFL1 Cofilin-1 yes yes 3 0.00052356 131.09 By MS/MS 9.5 0.5 1 1 2 326830 326830 0 7526 707 7778 18597;18598 14988;14989 14988 1 9229 0 KSTAALEEDAQILK RKPERKPSDEEFASRKSTAALEEDAQILKV RKSTAALEEDAQILKVIEAYCTSAKTRQTL R K S L K V 3 0 0 1 0 1 2 0 0 1 2 2 0 0 0 1 1 0 0 0 0 0 14 1 1515.8144 Q14155;Q15052 Q14155 702 715 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 no no 2 0.0095181 97.86 By MS/MS 5 0 1 1 1026000 1026000 0 7527 1423;1483 7779 18599 14990 14990 0 10290 0 KSTVLQQQYNR GDEESTMLEDSVSPKKSTVLQQQYNRVGKV VSPKKSTVLQQQYNRVGKVEHGSVALPAIM K K S N R V 0 1 1 0 0 3 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 11 1 1363.7208 Q9Y490 Q9Y490 428 438 TLN1 Talin-1 yes yes 2;3 1.2441E-07 202.96 By MS/MS 2.5 0.5 2 2 4 1554700 1554700 0 7528 2888 7780 18600;18601;18602;18603 14991;14992 14992 2 444640 0 KTAEAGGVTGK DGFSELRWDDQQKVKKTAEAGGVTGKGQDG QKVKKTAEAGGVTGKGQDGIGSKAEKTLGD K K T G K G 2 0 0 0 0 0 1 3 0 0 0 2 0 0 0 0 2 0 0 1 0 0 11 1 1017.5455 P09874 P09874 87 97 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00044186 149.33 By MS/MS By matching 5.25 2.77 1 2 1 3 1 2517200 2493300 23824 7529 543 7781 18604;18605;18606;18607 14993;14994;14995 14993 3 180890 50761 KTATAVAHCK PSKGPLQSVQVFGRKKTATAVAHCKRGNGL VFGRKKTATAVAHCKRGNGLIKVNGRPLEM K K T C K R 3 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 2 0 0 1 0 0 10 1 1085.5652 P62249 P62249 17 26 RPS16 40S ribosomal protein S16 yes yes 2;3 8.9982E-08 199.46 By MS/MS 10 0 2 2 2286300 2286300 0 7530 1145 7782 18608;18609 14996;14997 14997 2 123230 0 KTDEFCQAK EAEDNMKLLPVDCERKTDEFCQAKQKAALL PVDCERKTDEFCQAKQKAALLELLHELYNF R K T A K Q 1 0 0 1 1 1 1 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 9 1 1125.5125 Q8NC56 Q8NC56 256 264 LEMD2 LEM domain-containing protein 2 yes yes 2 0.0015083 148.52 By MS/MS 6 0 1 1 1796200 1796200 0 7531 1948 7783 18610 14998 14998 1 12348 0 KTDFSWEEER TQLLSLYVLFHCLAKKTDFSWEEERNFGAS HCLAKKTDFSWEEERNFGASLLLPGLKQKN K K T E R N 0 1 0 1 0 0 3 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 10 1 1325.5888 Q92552 Q92552 193 202 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.00011781 158.47 By MS/MS 7 0 1 1 1454700 1454700 0 7532 2054 7784 18611 14999 14999 1 22837 0 KTEAAATTR NIKHQPGGGRAKVEKKTEAAATTRKPESNA RAKVEKKTEAAATTRKPESNAVTKTAGPIA K K T T R K 3 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 9 1 947.50361 P27816 P27816 959 967 MAP4 Microtubule-associated protein 4 yes yes 2 0.0081724 116.37 By MS/MS 2 0 1 1 84175 84175 0 7533 746 7785 18612 15000 15000 1 28471 0 KTFSYAGFEMQPK GALEDSQLVAGVAFKKTFSYAGFEMQPKKY FKKTFSYAGFEMQPKKYHNPKIALLNVELE K K T P K K 1 0 0 0 0 1 1 1 0 0 0 2 1 2 1 1 1 0 1 0 0 0 13 1 1532.7334 Q99832 Q99832 218 230 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.0039691 96.591 By MS/MS 6 0 2 2 2958300 2958300 0 7534 2270 7786 18613;18614 15001;15002 15001 1055 1 20336 0 KTGCNVLLIQK REERAYILNLVKQIKKTGCNVLLIQKSILR KQIKKTGCNVLLIQKSILRDALSDLALHFL K K T Q K S 0 0 1 0 1 1 0 1 0 1 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1272.7224 P50991 P50991 292 302 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0002182 155.06 By MS/MS 6 0 2 2 20001000 20001000 0 7535 985 7787 18615;18616 15003;15004 15003 2 137490 0 KTGQAPGYSYTAANK GKHKTGPNLHGLFGRKTGQAPGYSYTAANK KTGQAPGYSYTAANKNKGIIWGEDTLMEYL R K T N K N 3 0 1 0 0 1 0 2 0 0 0 2 0 0 1 1 2 0 2 0 0 0 15 1 1555.7631 P99999 P99999 40 54 CYCS Cytochrome c yes yes 2;3 0.0015685 165.35 By MS/MS 10 0 2 2 611600 611600 0 7536 1256 7788 18617;18618 15005;15006;15007 15006 3 32963 0 KTKFENLCK ELPEDEEEKKKQEEKKTKFENLCKIMKDIL KKQEEKKTKFENLCKIMKDILEKKVEKVVV K K T C K I 0 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 9 2 1166.6118 P07900;Q58FG0 P07900 565 573 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 3 0.025572 84.615 By MS/MS 4 0 1 1 2832800 2832800 0 7537 513 7789 18619 15008 15008 1 266590 0 KTKPYIQVDIGGGQTK VQQDIKFLPFKVVEKKTKPYIQVDIGGGQT TKPYIQVDIGGGQTKTFAPEEISAMVLTKM K K T T K T 0 0 0 1 0 2 0 3 0 2 0 3 0 0 1 0 2 0 1 1 0 0 16 2 1731.9519 P11021 P11021 123 138 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0013298 112.57 By MS/MS 5 0 1 1 1152200 1152200 0 7538 571 7790 18620 15009 15009 1 11556 0 KTNPEIQSTLR RRMAEAELVQEGKARKTNPEIQSTLRKRLY GKARKTNPEIQSTLRKRLYLQ_________ R K T L R K 0 1 1 0 0 1 1 0 0 1 1 1 0 0 1 1 2 0 0 0 0 0 11 1 1285.699 P31944 P31944 226 236 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2 0.0085286 120.63 By MS/MS By MS/MS 4.67 2.92 1 1 1 1 1 1 1 5 752290 328670 423620 7539 792 7791 18621;18622;18623;18624;18625;18626 15010;15011;15012;15013 15013 4 17714 561370 KTNPEIQSTLRK RRMAEAELVQEGKARKTNPEIQSTLRKRLY KARKTNPEIQSTLRKRLYLQ__________ R K T R K R 0 1 1 0 0 1 1 0 0 1 1 2 0 0 1 1 2 0 0 0 0 0 12 2 1413.794 P31944 P31944 226 237 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 3 0.0039245 132.86 By MS/MS 2.5 1.12 1 1 1 1 4 988010 0 988010 7540 792 7792 18627;18628;18629;18630 15014 15014 1 0 491510 KTPCGEGSK GPVRMPTKTLRITTRKTPCGEGSKTWDRFQ LRITTRKTPCGEGSKTWDRFQMRIHKRLID R K T S K T 0 0 0 0 1 0 1 2 0 0 0 2 0 0 1 1 1 0 0 0 0 0 9 1 962.44913 P60866 P60866 67 75 RPS20 40S ribosomal protein S20 yes yes 2 0.0049467 101.46 By MS/MS 9.67 0.471 1 2 3 2015800 2015800 0 7541 1098 7793 18631;18632;18633 15015;15016 15016 2 107900 0 KTPCGEGSKTWDR GPVRMPTKTLRITTRKTPCGEGSKTWDRFQ TRKTPCGEGSKTWDRFQMRIHKRLIDLHSP R K T D R F 0 1 0 1 1 0 1 2 0 0 0 2 0 0 1 1 2 1 0 0 0 0 13 2 1520.7042 P60866 P60866 67 79 RPS20 40S ribosomal protein S20 yes yes 3 0.0016138 112.84 By MS/MS 10 0 1 1 942370 942370 0 7542 1098 7794 18634 15017 15017 1 50790 0 KTQVLQPEEK HFEQAIERVIGGLEKKTQVLQPEEKKTVAY GGLEKKTQVLQPEEKKTVAYHEAGHAVAGW K K T E K K 0 0 0 0 0 2 2 0 0 0 1 2 0 0 1 0 1 0 0 1 0 0 10 1 1198.6558 Q9Y4W6 Q9Y4W6 559 568 AFG3L2 AFG3-like protein 2 yes yes 2 0.0033981 123.75 By MS/MS 5 0 1 1 762580 762580 0 7543 2902 7795 18635 15018 15018 1 7648.3 0 KTSFVNFTDICK KFVMKPPQVVRVGTKKTSFVNFTDICKLLH GTKKTSFVNFTDICKLLHRQPKHLLAFLLA K K T C K L 0 0 1 1 1 0 0 0 0 1 0 2 0 2 0 1 2 0 0 1 0 0 12 1 1458.7177 P20042 P20042 216 227 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 9.3287E-05 174.57 By MS/MS 6 0 1 1 1759500 1759500 0 7544 668 7796 18636 15019 15019 1 12095 0 KTSYAQHQQVR LFCVGFTKKRNNQIRKTSYAQHQQVRQIRK NQIRKTSYAQHQQVRQIRKKMMEIMTREVQ R K T V R Q 1 1 0 0 0 3 0 0 1 0 0 1 0 0 0 1 1 0 1 1 0 0 11 1 1344.6898 P61247 P61247 152 162 RPS3A 40S ribosomal protein S3a yes yes 2;3 1.5903E-09 223.87 By MS/MS By matching 8.25 0.433 3 1 3 1 12877000 12867000 10500 7545 1118 7797 18637;18638;18639;18640 15020;15021 15021 2 164660 14170 KTYDLLFK ______________________________ ______________________________ K K T F K L 0 0 0 1 0 0 0 0 0 0 2 2 0 1 0 0 1 0 1 0 0 0 8 1 1026.575 P61026 P61026 4 11 RAB10 Ras-related protein Rab-10 yes yes 2 0.0086636 139.97 By MS/MS 9 0 1 1 685910 685910 0 7546 1106 7798 18641 15022 15022 1 13499 0 KTYSVPAHQER GCPVNTEPSGPTCEKKTYSVPAHQERAYEY TCEKKTYSVPAHQERAYEYVECPIRGTAAE K K T E R A 1 1 0 0 0 1 1 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 11 1 1314.668 P53701 P53701 49 59 HCCS Cytochrome c-type heme lyase yes yes 3 0.0015602 110.64 By MS/MS 8 0 1 1 0 0 0 7547 1035 7799 18642 15023 15023 1 0 0 KVAHSDKPGSTSTASFR SEENRHLRDEGLRLRKVAHSDKPGSTSTAS AHSDKPGSTSTASFRDNVTSPLPSLLVVIA R K V F R D 2 1 0 1 0 0 0 1 1 0 0 2 0 1 1 4 2 0 0 1 0 0 17 2 1774.8962 Q9P0L0 Q9P0L0 205 221 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.00047768 159.4 By MS/MS 8 0 1 1 1084300 1084300 0 7548 2665 7800 18643 15024 15024 1 13689 0 KVCGDSDKGFVVINQK KFIEDRVKKIIELKRKVCGDSDKGFVVINQ VCGDSDKGFVVINQKGIDPFSLDALSKEGI R K V Q K G 0 0 1 2 1 1 0 2 0 1 0 3 0 1 0 1 0 0 0 3 0 0 16 2 1792.9142 P40227 P40227 280 295 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 4.7624E-16 263.89 By MS/MS 6 0.707 1 2 1 4 24251000 24251000 0 7549 858 7801 18644;18645;18646;18647 15025;15026;15027;15028 15026 4 185750 0 KVDEAIALFQK EADEAKLQQTEAELRKVDEAIALFQKML__ AELRKVDEAIALFQKML_____________ R K V Q K M 2 0 0 1 0 1 1 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 11 1 1260.7078 P26640 P26640 1252 1262 VARS Valine--tRNA ligase yes yes 2 5.7435E-05 166.86 By MS/MS 3.5 0.5 1 1 2 707080 707080 0 7550 735 7802 18648;18649 15029 15029 1 34219 0 KVDWLTEK TLTITQAVIFINTRRKVDWLTEKMHARDFT IFINTRRKVDWLTEKMHARDFTVSAMHGDM R K V E K M 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 8 1 1017.5495 P60842;Q14240;P38919 P60842 284 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.00030365 176.44 By MS/MS 5.7 2.83 1 1 1 1 2 1 1 1 1 10 423090000 423090000 0 7551 1097;851 7803 18650;18651;18652;18653;18654;18655;18656;18657;18658;18659 15030;15031;15032;15033;15034;15035;15036;15037;15038 15031 9 4418500 0 KVEEAEPEEFVVEK TTLQKMGKKQNGKSKKVEEAEPEEFVVEKV KKVEEAEPEEFVVEKVLDRRVVNGKVEYFL K K V E K V 1 0 0 0 0 0 6 0 0 0 0 2 0 1 1 0 0 0 0 3 0 0 14 1 1660.8196 Q13185 Q13185 21 34 CBX3 Chromobox protein homolog 3 yes yes 2;3 4.2015E-70 398.14 By MS/MS 9.33 0.471 2 1 3 5030200 5030200 0 7552 1362 7804 18660;18661;18662 15039;15040 15039 2 104730 0 KVEEEEKLLK ASLSKSVGVSNRQNKKVEEEEKLLKLFQGV NRQNKKVEEEEKLLKLFQGVNKAQDGFTQW K K V L K L 0 0 0 0 0 0 4 0 0 0 2 3 0 0 0 0 0 0 0 1 0 0 10 2 1243.7024 Q6Y7W6 Q6Y7W6 1114 1123 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.00020178 144.65 By MS/MS 3 0 1 1 489550 489550 0 7553 1738 7805 18663 15041 15041 1 8957.5 0 KVEGDIWALQK YKDITHGNRQMTVIRKVEGDIWALQKDVED TVIRKVEGDIWALQKDVEDFLSPLLGKTPV R K V Q K D 1 0 0 1 0 1 1 1 0 1 1 2 0 0 0 0 0 1 0 1 0 0 11 1 1285.703 Q13405 Q13405 112 122 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 5.3514E-05 167.93 By MS/MS 10 0 1 1 515830 515830 0 7554 1378 7806 18664 15042 15042 1 27801 0 KVEITTETIK DPKNVLITDFFGSVRKVEITTETIKLQQDS FGSVRKVEITTETIKLQQDSEIMESSYKED R K V I K L 0 0 0 0 0 0 2 0 0 2 0 2 0 0 0 0 3 0 0 1 0 0 10 1 1160.6653 Q92643 Q92643 309 318 PIGK GPI-anchor transamidase yes yes 2 0.0039497 120.63 By MS/MS 7 0 1 1 2070000 2070000 0 7555 2066 7807 18665 15043 15043 1 32495 0 KVEKLEQQCQK NHIQELQIMDERIQRKVEKLEQQCQKEAKE RIQRKVEKLEQQCQKEAKEFAKKVQELQKS R K V Q K E 0 0 0 0 1 3 2 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 11 2 1416.7395 O00471 O00471 63 73 EXOC5 Exocyst complex component 5 yes yes 2 7.397E-19 215.06 By MS/MS 5 0 1 1 197360 197360 0 7556 108 7808 18666 15044 15044 0 1979.4 0 KVELPVPTHR PEQVASEGLPEPVLRKVELPVPTHRRPVQA EPVLRKVELPVPTHRRPVQAWVESLRGFEQ R K V H R R 0 1 0 0 0 0 1 0 1 0 1 1 0 0 2 0 1 0 0 2 0 0 10 1 1174.6822 Q9BYD3 Q9BYD3 50 59 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 3 0.038545 67.214 By MS/MS 7 0 1 1 1070200 1070200 0 7557 2370 7809 18667 15045 15045 1 16800 0 KVEPSDPVAR RSVQRKVSPASGVSKKVEPSDPVARRVYLT SGVSKKVEPSDPVARRVYLTTQLKQKKSTL K K V A R R 1 1 0 1 0 0 1 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 10 1 1096.5877 Q9UNY4 Q9UNY4 404 413 TTF2 Transcription termination factor 2 yes yes 2 0.031157 96.342 By MS/MS 3 0 1 1 196800 196800 0 7558 2795 7810 18668 15046 15046 1 3600.9 0 KVEPVTQK NGKEISPGSGPGEIRKVEPVTQKDSTSLSS SGPGEIRKVEPVTQKDSTSLSSESSSSSSE R K V Q K D 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 1 0 0 2 0 0 8 1 927.53893 O43491 O43491 725 732 EPB41L2 Band 4.1-like protein 2 yes yes 2 0.023843 128.61 By MS/MS 3 0 1 1 237640 237640 0 7559 214 7811 18669 15047 15047 1 4348.2 0 KVESTGAVPEFKEEK QPDFFLDEYPEAVSKKVESTGAVPEFKEEK KVESTGAVPEFKEEKLQLQPKPRSGAVEET K K V E K L 1 0 0 0 0 0 4 1 0 0 0 3 0 1 1 1 1 0 0 2 0 0 15 2 1676.8621 Q6YN16 Q6YN16 284 298 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 3 0.026764 89.466 By MS/MS 7 0 1 1 1472600 1472600 0 7560 1740 7812 18670 15048 15048 1 23117 0 KVESTKTDSR HVVFGKVLEGMEVVRKVESTKTDSRDKPLK MEVVRKVESTKTDSRDKPLKDVIIADCGKI R K V S R D 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 2 2 0 0 1 0 0 10 2 1149.599 P23284 P23284 181 190 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.00029786 136.49 By MS/MS 9 0 1 1 158980 158980 0 7561 702 7813 18671 15049 15049 1 3128.7 0 KVETDHIVAAVGLEPNVELAK GVSSGKLLIKLKDGRKVETDHIVAAVGLEP IVAAVGLEPNVELAKTGGLEIDSDFGGFRV R K V A K T 3 0 1 1 0 0 3 1 1 1 2 2 0 0 1 0 1 0 0 4 0 0 21 1 2231.2161 O95831 O95831 388 408 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 8.6471E-06 146.68 By MS/MS 6 0.816 1 1 1 3 14238000 14238000 0 7562 429 7814 18672;18673;18674 15050;15051 15050 2 127040 0 KVFANPEDCVAFGK MMLMSTATAFYRLTRKVFANPEDCVAFGKG RKVFANPEDCVAFGKGENAKKYLRTDDRVE R K V G K G 2 0 1 1 1 0 1 1 0 0 0 2 0 2 1 0 0 0 0 2 0 0 14 1 1580.7657 P10620 P10620 42 55 MGST1 Microsomal glutathione S-transferase 1 yes yes 2 0.048545 88.101 By MS/MS 10 0 1 1 502040 502040 0 7563 566 7815 18675 15052 15052 1 27058 0 KVFDPVPVGVTK QILPLHSQIPREEQRKVFDPVPVGVTKVIL EQRKVFDPVPVGVTKVILSTNIAETSITIN R K V T K V 0 0 0 1 0 0 0 1 0 0 0 2 0 1 2 0 1 0 0 4 0 0 12 1 1284.7442 Q08211 Q08211 697 708 DHX9 ATP-dependent RNA helicase A yes yes 2 0.027031 95.094 By MS/MS 3.5 0.5 1 1 2 957180 957180 0 7564 1307 7816 18676;18677 15053 15053 1 45375 0 KVGALESK AARISALNIVGDLLRKVGALESKLASCRNL IVGDLLRKVGALESKLASCRNLVYDQSPNR R K V S K L 1 0 0 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 8 1 830.48617 Q9NXR1;Q9GZM8 Q9NXR1 263 270 NDE1;NDEL1 Nuclear distribution protein nudE homolog 1;Nuclear distribution protein nudE-like 1 yes no 2 0.0056709 139.97 By matching By MS/MS 5.25 1.98 1 1 1 1 1 2 1 2 6 830810 94268 736550 7565 2395 7817 18678;18679;18680;18681;18682;18683;18684;18685 15054 15054 1 1368.6 430060 KVGDDIAK SALAPKIGPLGLSPKKVGDDIAKATGDWKG PLGLSPKKVGDDIAKATGDWKGLRITVKLT K K V A K A 1 0 0 2 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 8 1 844.46543 P30050 P30050 41 48 RPL12 60S ribosomal protein L12 yes yes 2 0.020522 120.87 By MS/MS 9.5 0.5 1 1 2 2955100 2955100 0 7566 766 7818 18686;18687 15055;15056 15056 2 88323 0 KVGNPFELDTQQGPQVDKEQFER YNEFLERTVEKAKQRKVGNPFELDTQQGPQ DTQQGPQVDKEQFERVLGYIQLGQKEGAKL R K V E R V 0 1 1 2 0 4 3 2 0 0 1 2 0 2 2 0 1 0 0 2 0 0 23 2 2688.3144 P30837 P30837 347 369 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 3 4.3915E-07 156.32 By MS/MS 6 0 1 1 1971700 1971700 0 7567 780 7819 18688 15057 15057 1 13554 0 KVGTFFSEVKPAGPTVEQQGEMAR PKVSGHVITDIVEGKKVGTFFSEVKPAGPT KPAGPTVEQQGEMARSGGRMLATLEPEQRA K K V A R S 2 1 0 0 0 2 3 3 0 0 0 2 1 2 2 1 2 0 0 3 0 0 24 2 2592.3006 P54886 P54886 348 371 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 7.9607E-06 112.41 By MS/MS 5 0 1 1 2619800 2619800 0 7568 1048 7820 18689 15058 15058 580 1 26275 0 KVHPAVVIR MVMATVKKGKPELRKKVHPAVVIRQRKSYR KPELRKKVHPAVVIRQRKSYRRKDGVFLYF K K V I R Q 1 1 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 3 0 0 9 1 1017.6447 P62829 P62829 75 83 RPL23 60S ribosomal protein L23 yes yes 3 0.0035045 118.5 By MS/MS 10 0 1 1 2425400 2425400 0 7569 1173 7821 18690 15059 15059 1 130720 0 KVIEEQLEPAVEK KVIEPQYFGLAYLFRKVIEEQLEPAVEKIS FRKVIEEQLEPAVEKISIMAERLANQFAIY R K V E K I 1 0 0 0 0 1 4 0 0 1 1 2 0 0 1 0 0 0 0 2 0 0 13 1 1510.8243 P42704 P42704 1224 1236 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 1.5223E-43 331.54 By MS/MS 3.8 0.748 2 2 1 5 10317000 10317000 0 7570 886 7822 18691;18692;18693;18694;18695 15060;15061 15061 2 311400 0 KVISSANR PETKKTRVKLPSGSKKVISSANRAVVGVVA KLPSGSKKVISSANRAVVGVVAGGGRIDKP K K V N R A 1 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 8 1 873.50321 P62917 P62917 156 163 RPL8 60S ribosomal protein L8 yes yes 2 0.007989 139.97 By MS/MS 8 0 1 1 1531800 1531800 0 7571 1187 7823 18696 15062 15062 1 19339 0 KVLADLAIYEPK ALIGNLVKCQVELNRKVLADLAIYEPKTFK LNRKVLADLAIYEPKTFKSLAALASRRRHE R K V P K T 2 0 0 1 0 0 1 0 0 1 2 2 0 0 1 0 0 0 1 1 0 0 12 1 1358.781 Q9BYC9 Q9BYC9 100 111 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.041945 89.356 By MS/MS 9 0 1 1 444760 444760 0 7572 2367 7824 18697 15063 15063 1 8752.9 0 KVLIQTK DVSRELGSSVALYSRKVLIQTKATDILPKW SSVALYSRKVLIQTKATDILPKWLRFIRGV R K V T K A 0 0 0 0 0 1 0 0 0 1 1 2 0 0 0 0 1 0 0 1 0 0 7 1 828.54329 Q12931 Q12931 369 375 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.031128 138.83 By MS/MS By matching 5 0 2 1 1 3997900 3966700 31161 7573 1340 7825 18698;18699 15064 15064 1 39784 26169 KVPGVTAIELDEDTGTFR GLAIGTHGSNIQQARKVPGVTAIELDEDTG GVTAIELDEDTGTFRIYGESADAVKKARGF R K V F R I 1 1 0 2 0 0 2 2 0 1 1 1 0 1 1 0 3 0 0 2 0 0 18 1 1946.9949 P51114 P51114 246 263 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 3 5.8531E-05 183.73 By MS/MS 5 0 1 1 1450500 1450500 0 7574 987 7826 18700 15065 15065 1 14548 0 KVPQVSTPTLVEVSR GEYGFQNALIVRYTRKVPQVSTPTLVEVSR KVPQVSTPTLVEVSRSLGKVGTRCCTKPES R K V S R S 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 CON__P02768-1;P02768;CON__P02769 CON__P02769 437 451 ALB Serum albumin no no 2;3 0.0013251 171.11 By MS/MS 5.5 0.5 2 2 4 10583000 10583000 0 + 7575 43;42 7827 18701;18702;18703;18704 15066;15067;15068;15069 15069 4 84776 0 KVQAAQSEAK GKLHNMIVDLDNVVKKVQAAQSEAKVVSQY DNVVKKVQAAQSEAKVVSQYHELVVQARDD K K V A K V 3 0 0 0 0 2 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1058.572 Q16891 Q16891 344 353 IMMT MICOS complex subunit MIC60 yes yes 2 0.0015855 133.99 By MS/MS By matching 4 0 2 1 1 492520 484240 8276.8 7576 1563 7828 18705;18706 15070 15070 1 45571 17635 KVQELQK KLEQQCQKEAKEFAKKVQELQKSNQVAFQH KEAKEFAKKVQELQKSNQVAFQHFQELDEH K K V Q K S 0 0 0 0 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 7 1 871.51272 O00471 O00471 81 87 EXOC5 Exocyst complex component 5 yes yes 2 0.019692 152.47 By MS/MS 5 0 1 1 845030 845030 0 7577 108 7829 18707 15071 15071 1 8475.2 0 KVQENSIQR DNVEWSEEQAAAAERKVQENSIQRVCQEKQ AAAAERKVQENSIQRVCQEKQVDYEINAHK R K V Q R V 0 1 1 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 1 1100.5938 Q6P1Q9;Q96IZ6 Q6P1Q9 53 61 METTL2B;METTL2A Methyltransferase-like protein 2B;Methyltransferase-like protein 2A yes no 2 0.037843 98.582 By MS/MS 7 0 1 1 454440 454440 0 7578 1703 7830 18708 15072 15072 1 7134 0 KVQGGALEDSQLVAGVAFK MMLDDLLQLKMIGIKKVQGGALEDSQLVAG GALEDSQLVAGVAFKKTFSYAGFEMQPKKY K K V F K K 3 0 0 1 0 2 1 3 0 0 2 2 0 1 0 1 0 0 0 3 0 0 19 1 1916.0367 Q99832 Q99832 199 217 CCT7 T-complex protein 1 subunit eta yes yes 2;3 3.9655E-07 215.93 By MS/MS 6 0 2 2 14290000 14290000 0 7579 2270 7831 18709;18710 15073;15074 15074 2 98234 0 KVQSGNINAAK PVLVLSQNTKRESGRKVQSGNINAAKTIAD ESGRKVQSGNINAAKTIADIIRTCLGPKSM R K V A K T 2 0 2 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 11 1 1128.6251 P49368 P49368 21 31 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 4.3105E-09 204.34 By MS/MS By MS/MS 6.45 1.44 3 4 2 1 1 8 3 50359000 50267000 91978 7580 947 7832 18711;18712;18713;18714;18715;18716;18717;18718;18719;18720;18721 15075;15076;15077;15078;15079;15080;15081;15082 15082 8 480520 89916 KVSHVADTK NADPQAVTMPATETKKVSHVADTKVNTKAQ PATETKKVSHVADTKVNTKAQETEAAPSQA K K V T K V 1 0 0 1 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 2 0 0 9 1 983.53999 Q9UNF1 Q9UNF1 125 133 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.00089687 154.01 By MS/MS 5 0 1 1 400140 400140 0 7581 2787 7833 18722 15083 15083 1 4013.1 0 KVTEDLSK AESTENSPTPSPLQKKVTEDLSKTLLMYTV TPSPLQKKVTEDLSKTLLMYTVPAVQGFFR K K V S K T 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 8 1 918.50221 P42345 P42345 1868 1875 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.020522 120.87 By MS/MS 2.5 0.5 1 1 2 525060 525060 0 7582 879 7834 18723;18724 15084 15084 1 137620 0 KVTEELLTDNR TLNFKMGNRHKFTGKKVTEELLTDNRYLLL FTGKKVTEELLTDNRYLLLVLMDAERAWSY K K V N R Y 0 1 1 1 0 0 2 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 11 1 1316.6936 Q9UHB9 Q9UHB9 112 122 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0003114 152.67 By MS/MS 5 0 1 1 1118200 1118200 0 7583 2728 7835 18725 15085 15085 1 11215 0 KVTGEVTDPSGK LKFVPYSYFSRDVARKVTGEVTDPSGKVHF VARKVTGEVTDPSGKVHFALLGTWDEKMEC R K V G K V 0 0 0 1 0 0 1 2 0 0 0 2 0 0 1 1 2 0 0 2 0 0 12 1 1216.6299 P22059 P22059 626 637 OSBP Oxysterol-binding protein 1 yes yes 2 0.0049518 116.84 By MS/MS 4 0 1 1 522530 522530 0 7584 686 7836 18726 15086 15086 1 49173 0 KVTLSTDK IKSLEKYIIEELNVRKVTLSTDKNKYGIRL IEELNVRKVTLSTDKNKYGIRLRAEPDHMV R K V D K N 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 8 1 890.5073 P41252 P41252 878 885 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0061557 145.16 By MS/MS 3.5 0.5 1 1 2 3648200 3648200 0 7585 871 7837 18727;18728 15087 15087 1 91276 0 KVTLSTDKNK IKSLEKYIIEELNVRKVTLSTDKNKYGIRL ELNVRKVTLSTDKNKYGIRLRAEPDHMVLG R K V N K Y 0 0 1 1 0 0 0 0 0 0 1 3 0 0 0 1 2 0 0 1 0 0 10 2 1132.6452 P41252 P41252 878 887 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.0951E-06 187.5 By MS/MS 3.5 0.5 1 1 2 1147000 1147000 0 7586 871 7838 18729;18730 15088 15088 1 33183 0 KVTQLDLDGPKELSR LIDIENPNRVAQTTKKVTQLDLDGPKELSR KVTQLDLDGPKELSRREREEIEKQKAKERY K K V S R R 0 1 0 2 0 1 1 1 0 0 3 2 0 0 1 1 1 0 0 1 0 0 15 2 1697.9312 Q13442 Q13442 95 109 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.0019939 111.07 By MS/MS 8 0 1 1 1369700 1369700 0 7587 1386 7839 18731 15089 15089 1 17292 0 KVVDNASQGEGVR KSWAALASWAYRWGRKVVDNASQGEGVRLL GRKVVDNASQGEGVRLLPREKSEVQNLLPD R K V V R L 1 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 13 1 1357.695 Q96Q15 Q96Q15 1632 1644 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.0053554 115.92 By MS/MS 2 0.816 1 1 1 3 244600 244600 0 7588 2213 7840 18732;18733;18734 15090 15090 1 54407 0 KVVDNTTAK VNKLLVGNKSDLTTKKVVDNTTAKEFADSL SDLTTKKVVDNTTAKEFADSLGIPFLETSA K K V A K E 1 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 2 0 0 9 1 974.53966 Q9H0U4;Q92928 Q9H0U4 129 137 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 2 0.027261 104.01 By MS/MS 8.5 0.5 1 1 2 768010 768010 0 7589 2416 7841 18735;18736 15091 15091 1 12407 0 KVVDYTTAK VNKLLVGNKCDLTTKKVVDYTTAKEFADSL CDLTTKKVVDYTTAKEFADSLGIPFLETSA K K V A K E 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 2 0 1 2 0 0 9 1 1023.5601 P62820 P62820 132 140 RAB1A Ras-related protein Rab-1A yes yes 2 0.027261 104.01 By MS/MS 9 0 1 1 741840 741840 0 7590 1171 7842 18737 15092 15092 1 14600 0 KVVEDIEYLK CEVLQYSAREAQDSKKVVEDIEYLKFDKGP AQDSKKVVEDIEYLKFDKGPWLKQDNRTLY K K V L K F 0 0 0 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 1 2 0 0 10 1 1234.6809 O95299 O95299 268 277 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.0040131 120.27 By MS/MS 7 0 1 1 1262600 1262600 0 7591 404 7843 18738 15093 15093 1 19820 0 KVVENEIYSESHR GVFSMGNNSYGQCGRKVVENEIYSESHRVH GRKVVENEIYSESHRVHRMQDFDGQVVQVA R K V H R V 0 1 1 0 0 0 3 0 1 1 0 1 0 0 0 2 0 0 1 2 0 0 13 1 1588.7845 Q96I51 Q96I51 209 221 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 3 0.0050331 118.73 By MS/MS 7 0.816 1 1 1 3 2924400 2924400 0 7592 2170 7844 18739;18740;18741 15094 15094 1 41938 0 KVVGCSCVVVK EWVGLCKIDREGKPRKVVGCSCVVVKDYGK GKPRKVVGCSCVVVKDYGKESQAKDVIEEY R K V V K D 0 0 0 0 2 0 0 1 0 0 0 2 0 0 0 1 0 0 0 5 0 0 11 1 1233.6573 P25398 P25398 102 112 RPS12 40S ribosomal protein S12 yes yes 2;3 3.9836E-05 157.75 By MS/MS 10 0 2 2 11844000 11844000 0 7593 721 7845 18742;18743 15095;15096 15095 2 638320 0 KVVGDVAYDEAKER CGINYVPDDKKPNGRKVVGDVAYDEAKERA RKVVGDVAYDEAKERASFITPVPGGVGPMT R K V E R A 2 1 0 2 0 0 2 1 0 0 0 2 0 0 0 0 0 0 1 3 0 0 14 2 1577.8049 P11586 P11586 251 264 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 5.0753E-10 214.61 By MS/MS 4.4 1.02 1 2 1 1 5 10976000 10976000 0 7594 582 7846 18744;18745;18746;18747;18748 15097;15098;15099 15098 2 929870 0 KVVNPLFEK KVAPAPAVVKKQEAKKVVNPLFEKRPKNFG KKQEAKKVVNPLFEKRPKNFGIGQDIQPKR K K V E K R 0 0 1 0 0 0 1 0 0 0 1 2 0 1 1 0 0 0 0 2 0 0 9 1 1072.6281 P62424 P62424 26 34 RPL7A 60S ribosomal protein L7a yes yes 2 0.0069612 120.87 By MS/MS 8 0 1 1 4633200 4633200 0 7595 1160 7847 18749 15100 15100 1 58494 0 KVVQLDVR LPHIENGGVAVLTGKKVVQLDVRDNMVKLN VAVLTGKKVVQLDVRDNMVKLNDGSQITYE K K V V R D 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 8 1 955.58147 O95831 O95831 232 239 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.033865 84.498 By MS/MS 5 0 1 1 865790 865790 0 7596 429 7848 18750 15101 15101 1 8683.4 0 KVVVSHSTHR VRTKMVYCKIDQTQRKVVVSHSTHRTFGKQ DQTQRKVVVSHSTHRTFGKQQWQQLYDTLN R K V H R T 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 3 0 0 10 1 1148.6414 Q7L2H7 Q7L2H7 331 340 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2;3 2.6354E-10 197.79 By MS/MS 7.8 0.748 2 2 1 5 8201500 8201500 0 7597 1762 7849 18751;18752;18753;18754;18755 15102;15103;15104;15105 15103 4 128800 0 KVYDQMPEPR IVAGTLTNKMAPALRKVYDQMPEPRYVVSM APALRKVYDQMPEPRYVVSMGSCANGGGYY R K V P R Y 0 1 0 1 0 1 1 0 0 0 0 1 1 0 2 0 0 0 1 1 0 0 10 1 1261.6125 O75251 O75251 136 145 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 0.00035631 152.06 By MS/MS 9 0 1 1 266960 266960 0 7598 307 7850 18756 15106 15106 130 1 5253.8 0 KYDAFLASESLIK KKLNKNKKLVKKLAKKYDAFLASESLIKQI AKKYDAFLASESLIKQIPRILGPGLNKAGK K K Y I K Q 2 0 0 1 0 0 1 0 0 1 2 2 0 1 0 2 0 0 1 0 0 0 13 1 1483.7922 P62906 P62906 106 118 RPL10A 60S ribosomal protein L10a yes yes 2;3 2.4235E-07 216.84 By MS/MS 8.33 0.471 2 1 3 2515000 2515000 0 7599 1184 7851 18757;18758;18759 15107;15108 15107 2 32721 0 KYDDVTEK VILVLLVIDAVREIRKYDDVTEKVNLQNNP DAVREIRKYDDVTEKVNLQNNPGAMEHFHM R K Y E K V 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 0 1 0 1 1 0 0 8 1 996.47639 P51572 P51572 72 79 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.019479 122.28 By MS/MS 8 0 1 1 653150 653150 0 7600 999 7852 18760 15109 15109 1 8245.9 0 KYDEVLHMVR IDPTEFKFKLALINRKYDEVLHMVRNAKLV ALINRKYDEVLHMVRNAKLVGQSIIAYLQK R K Y V R N 0 1 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 1 2 0 0 10 1 1288.6598 P53621 P53621 607 616 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.02996 69.65 By MS/MS 3 0 1 1 563480 563480 0 7601 1034 7853 18761 15110 15110 574 1 10310 0 KYEDEINK SELNNMQDLVEDYKKKYEDEINKRTAAEND LVEDYKKKYEDEINKRTAAENDFVTLKKDV K K Y N K R 0 0 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 8 1 1037.5029 CON__P35908v2;CON__P35908;P35908;CON__P12035;P12035;CON__Q3TTY5;CON__ENSEMBL:ENSBTAP00000038253 CON__P35908v2 267 274 KRT2;KRT3 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3 no no 2 0.0043778 149.57 By MS/MS 4 2.16 1 1 1 1 1 1 6 1291400 0 1291400 + 7602 55;48;65;34 7854 18762;18763;18764;18765;18766;18767 15111;15112 15111 2 0 762200 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1193.6041 CON__P35908v2;CON__P35908;P35908;CON__P12035;P12035;CON__Q3TTY5;CON__ENSEMBL:ENSBTAP00000038253 CON__P35908v2 267 275 KRT2;KRT3 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3 no no 2;3 2.5809E-20 253.05 By MS/MS By MS/MS 5.16 2.62 2 3 5 5 3 3 2 4 2 2 14 17 238780000 86685000 152090000 + 7603 55;48;65;34 7855 18768;18769;18770;18771;18772;18773;18774;18775;18776;18777;18778;18779;18780;18781;18782;18783;18784;18785;18786;18787;18788;18789;18790;18791;18792;18793;18794;18795;18796;18797;18798 15113;15114;15115;15116;15117;15118;15119;15120;15121;15122;15123;15124;15125;15126;15127;15128;15129;15130;15131;15132;15133;15134;15135;15136;15137;15138;15139 15126 26 4927000 44556000 KYEDICPSTHNMDVPNIK HAKVHLVGIDIFTGKKYEDICPSTHNMDVP DICPSTHNMDVPNIKRNDFQLIGIQDGYLS K K Y I K R 0 0 2 2 1 0 1 0 1 2 0 2 1 0 2 1 1 0 1 1 0 0 18 1 2159.998 P63241;Q6IS14;Q9GZV4 P63241 68 85 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 3 0.00019471 159.44 By MS/MS 9.5 0.5 1 1 2 1657100 1657100 0 7604 1201 7856 18799;18800 15140;15141;15142;15143 15140 699 4 74551 0 KYEDICPSTHNMDVPNIKR HAKVHLVGIDIFTGKKYEDICPSTHNMDVP ICPSTHNMDVPNIKRNDFQLIGIQDGYLSL K K Y K R N 0 1 2 2 1 0 1 0 1 2 0 2 1 0 2 1 1 0 1 1 0 0 19 2 2316.0991 P63241;Q6IS14;Q9GZV4 P63241 68 86 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 4 0.0060297 78.249 By MS/MS 9.5 0.5 1 1 2 1498100 1498100 0 7605 1201 7857 18801;18802 15144;15145;15146 15146 699 3 62963 0 KYEEIDNAPEER AITKILAEGGGAKFKKYEEIDNAPEERARG KFKKYEEIDNAPEERARGITINAAHVEYST K K Y E R A 1 1 1 1 0 0 4 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 12 1 1491.6842 P49411 P49411 91 102 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 4.6797E-06 199.12 By MS/MS 7.75 0.829 2 1 1 4 48605000 48605000 0 7606 949 7858 18803;18804;18805;18806 15147;15148;15149 15148 3 764690 0 KYEFGESDLR IIQERLRYAPLGWSKKYEFGESDLRSACDT LGWSKKYEFGESDLRSACDTVDTWLDDTAK K K Y L R S 0 1 0 1 0 0 2 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 10 1 1242.5881 Q14204 Q14204 4204 4213 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.038442 91.549 By MS/MS 2.5 1.12 1 1 1 1 4 5424500 5424500 0 7607 1433 7859 18807;18808;18809;18810 15150;15151 15151 2 1092800 0 KYELGRPAANTK RRKTGGKRKPYHKKRKYELGRPAANTKIGP KKRKYELGRPAANTKIGPRRIHTVRVRGGN R K Y T K I 2 1 1 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 1 0 0 0 12 2 1346.7306 P62241 P62241 26 37 RPS8 40S ribosomal protein S8 yes yes 2 0.00095337 155.33 By MS/MS 8 0 1 1 2777300 2777300 0 7608 1143 7860 18811 15152 15152 1 35064 0 KYEMFAQTLQQSR AMRFARRSVSDNDIRKYEMFAQTLQQSRGF IRKYEMFAQTLQQSRGFGSFRFPSGNQGGA R K Y S R G 1 1 0 0 0 3 1 0 0 0 1 1 1 1 0 1 1 0 1 0 0 0 13 1 1628.7981 P55072 P55072 754 766 VCP Transitional endoplasmic reticulum ATPase yes yes 2;3 0.00032904 171.62 By MS/MS 4 0 2 2 2856900 2856900 0 7609 1054 7861;7862 18812;18813 15153;15154 15153 590 2 268860 0 KYEQEQEKGQEDLK EVESEPRAREVVDWRKYEQEQEKGQEDLKI RKYEQEQEKGQEDLKIIEEKRKEHKEAHQK R K Y L K I 0 0 0 1 0 3 4 1 0 0 1 3 0 0 0 0 0 0 1 0 0 0 14 2 1750.8374 P46199 P46199 448 461 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 3 0.0060221 131.08 By MS/MS 5 0 1 1 1200600 1200600 0 7610 910 7863 18814 15155 15155 1 12041 0 KYGPFVADFADK FTALSVLGVMVYGIKKYGPFVADFADKLNE GIKKYGPFVADFADKLNEQKLAQLEEAKQA K K Y D K L 2 0 0 2 0 0 0 1 0 0 0 2 0 2 1 0 0 0 1 1 0 0 12 1 1356.6714 P24539 P24539 115 126 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.0042288 120.77 By MS/MS 8.5 0.5 1 1 2 1346600 1346600 0 7611 714 7864 18815;18816 15156;15157 15157 2 18819 0 KYGTDLSR VSMDDHKLSLDELHRKYGTDLSRGLTSARA SLDELHRKYGTDLSRGLTSARAAEILARDG R K Y S R G 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 8 1 938.48214 P05023 P05023 54 61 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.052701 104.75 By MS/MS 2.5 1.12 1 1 1 1 4 5531400 5531400 0 7612 481 7865 18817;18818;18819;18820 15158 15158 1 745460 0 KYHNVGLSK ITFKEEEPVKKIMEKKYHNVGLSKCEIKVA KKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ K K Y S K C 0 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 0 1 1 0 0 9 1 1044.5716 Q14103 Q14103 243 251 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 3 0.045438 68.846 By MS/MS 7 0 1 1 1211200 1211200 0 7613 1419 7866 18821 15159 15159 1 19014 0 KYHPDTNKDDPK ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE LAKKYHPDTNKDDPKAKEKFSQLAEAYEVL K K Y P K A 0 0 1 3 0 0 0 0 1 0 0 3 0 0 2 0 1 0 1 0 0 0 12 2 1456.6947 Q96EY1 Q96EY1 119 130 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2;3 0.0026854 128.51 By MS/MS 7 0 2 2 3209100 3209100 0 7614 2150 7867 18822;18823 15160;15161 15161 2 50378 0 KYTEQITNEK ILDVLEEIPKNAAYRKYTEQITNEKLAMVK NAAYRKYTEQITNEKLAMVKAEPDVKKLED R K Y E K L 0 0 1 0 0 1 2 0 0 1 0 2 0 0 0 0 2 0 1 0 0 0 10 1 1252.6299 Q16718 Q16718 46 55 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2;3 1.7639E-14 241.13 By MS/MS 10 0 2 2 3415100 3415100 0 7615 1558 7868 18824;18825 15162;15163 15162 2 184060 0 KYTGEDFDEDLR AWMNGLSVYQIKVHRKYTGEDFDEDLRTVL VHRKYTGEDFDEDLRTVLRRSGCKNEKIAF R K Y L R T 0 1 0 3 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 12 1 1486.6576 Q14204 Q14204 2966 2977 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.00091982 118.76 By MS/MS 1.5 0.5 1 1 2 1122800 1122800 0 7616 1433 7869 18826;18827 15164 15164 1 327150 0 KYVTGAQRLEEAQK FSTAIEEYNCALTEKKYVTGAQRLEEAQKC KKYVTGAQRLEEAQKCLKLLKSRKCFDLKI K K Y Q K C 2 1 0 0 0 2 2 1 0 0 1 2 0 0 0 0 1 0 1 1 0 0 14 2 1619.8631 O43264 O43264 130 143 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 3 0.038163 69.229 By MS/MS 4 0 1 1 487720 487720 0 7617 200 7870 18828 15165 15165 1 45897 0 LAAAFAVSR SEFSTSETMGHSADRLAAAFAVSRLEQDEY GHSADRLAAAFAVSRLEQDEYALRSHSLAK R L A S R L 4 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 9 0 904.51305 P55084 P55084 230 238 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.0017108 124.98 By MS/MS 6.5 0.5 1 1 2 5202800 5202800 0 7618 1055 7871 18829;18830 15166;15167 15166 2 55345 0 LAADDFR TTDNANILLQIDNARLAADDFRLKYENEVA LLQIDNARLAADDFRLKYENEVALRQSVEA R L A F R L 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 806.39227 CON__P13645;P13645;CON__P02535-1;CON__Q7Z3Y7;Q7Z3Y7;CON__Q148H6;CON__Q2M2I5;Q2M2I5;CON__P05784;CON__A2AB72;P05783;P13646;CON__ENSEMBL:ENSP00000377550;CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q14525;Q14525;CON__Q497I4;CON__Q92764;Q92764;CON__Q9UE12;CON__Q15323;Q15323;Q14532;CON__Q14532 CON__P13645 229 235 KRT10;KRT28;KRT24;KRT18;KRT13;KRT17;KRT14;KRT16;KRT33B;KRT35;KRT31;KRT32 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 18;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha2 no no 2 0.026551 107.32 By MS/MS By matching 4.67 2.9 2 1 2 2 1 1 1 1 1 9 3 376490000 230530000 145960000 + 7619 50;39;47;57;603;59;61 7872 18831;18832;18833;18834;18835;18836;18837;18838;18839;18840;18841;18842 15168;15169;15170;15171;15172;15173;15174;15175 15170 8 17883000 40688000 LAADDFRLK TTDNANILLQIDNARLAADDFRLKYENEVA QIDNARLAADDFRLKYENEVALRQSVEADI R L A L K Y 2 1 0 2 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 9 1 1047.5713 CON__P13645;P13645;CON__P02535-1;CON__Q7Z3Y7;Q7Z3Y7;CON__Q148H6;CON__Q2M2I5;Q2M2I5;P13646;CON__ENSEMBL:ENSP00000377550 CON__P13645 229 237 KRT10;KRT28;KRT24;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 13 no no 2;3 0.0041752 136.27 By matching By MS/MS 3.36 1.76 2 3 4 1 2 1 1 5 9 11665000 928520 10736000 + 7620 50;603 7873 18843;18844;18845;18846;18847;18848;18849;18850;18851;18852;18853;18854;18855;18856 15176;15177;15178;15179;15180;15181;15182;15183 15180 8 111090 2907400 LAADFQR ______________________________ DAWEEIRRLAADFQRAQFAEATQRLSERNC R L A Q R A 2 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 819.4239 O94874 O94874 11 17 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.032667 102.71 By MS/MS By matching 4.33 0.471 2 1 2 1 4605200 4548200 56982 7621 372 7874 18857;18858;18859 15184 15184 1 386020 121410 LAADVGK TSLCFVYPLDFARTRLAADVGKAGAEREFR PLDFARTRLAADVGKAGAEREFRGLGDCLV R L A G K A 2 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 672.38064 P05141;P12235;P12236 P05141 141 147 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.016101 119.56 By MS/MS 4.5 3.04 1 1 1 1 4 258970000 258970000 0 7622 487;589;588 7875 18860;18861;18862;18863 15185;15186;15187;15188 15185 4 15543000 0 LAADVGKAGAER TSLCFVYPLDFARTRLAADVGKAGAEREFR RTRLAADVGKAGAEREFRGLGDCLVKIYKS R L A E R E 4 1 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 1 0 0 12 1 1156.62 P05141 P05141 141 152 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.014289 109.72 By MS/MS 2 0.816 1 1 1 3 1442200 1442200 0 7623 487 7876 18864;18865;18866 15189 15189 1 287900 0 LAADVGKGAAQR TSLCFVYPLDFARTRLAADVGKGAAQREFH RTRLAADVGKGAAQREFHGLGDCIIKIFKS R L A Q R E 4 1 0 1 0 1 0 2 0 0 1 1 0 0 0 0 0 0 0 1 0 0 12 1 1155.636 P12235 P12235 141 152 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.029352 100.82 By MS/MS 8 0 1 1 628680 628680 0 7624 588 7877 18867 15190 15190 1 7937 0 LAADVGKSGTER TSLCFVYPLDFARTRLAADVGKSGTEREFR RTRLAADVGKSGTEREFRGLGDCLVKITKS R L A E R E 2 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 1 0 0 1 0 0 12 1 1202.6255 P12236 P12236 141 152 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0018341 139.32 By MS/MS 6 3.74 1 1 1 1 1 5 4128300 4128300 0 7625 589 7878 18868;18869;18870;18871;18872 15191;15192 15192 2 181270 0 LAADVGKSGTEREFR TSLCFVYPLDFARTRLAADVGKSGTEREFR LAADVGKSGTEREFRGLGDCLVKITKSDGI R L A F R G 2 2 0 1 0 0 2 2 0 0 1 1 0 1 0 1 1 0 0 1 0 0 15 2 1634.8376 P12236 P12236 141 155 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 3 0.029039 74.46 By MS/MS 4.5 3.5 1 1 2 2972000 2972000 0 7626 589 7879 18873;18874 15193;15194 15193 2 121380 0 LAAEQFCTR EVDTAKNKEKLEKLRLAAEQFCTRLGRYRM KLEKLRLAAEQFCTRLGRYRMPFAWTAVHL R L A T R L 2 1 0 0 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1094.5179 Q96HP0 Q96HP0 378 386 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0016533 125.71 By MS/MS 2.5 0.5 1 1 2 890020 890020 0 7627 2166 7880 18875;18876 15195 15195 1 244600 0 LAAGDQLLSVDGR VKSVVKGGAADVDGRLAAGDQLLSVDGRSL GRLAAGDQLLSVDGRSLVGLSQERAAELMT R L A G R S 2 1 0 2 0 1 0 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 13 0 1313.6939 P55196 P55196 1052 1064 MLLT4 Afadin yes yes 2 1.0262E-05 196.16 By MS/MS 3 0.816 1 1 1 3 1359000 1359000 0 7628 1057 7881 18877;18878;18879 15196 15196 1 274620 0 LAAIAESGVER ALAMERDGSSGGVIRLAAIAESGVERQVLL GVIRLAAIAESGVERQVLLGDQIPKFAVAT R L A E R Q 3 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1114.5982 P28072 P28072 210 220 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.00021292 142 By MS/MS By MS/MS 8.8 0.748 2 2 1 3 2 16618000 16475000 143730 7629 750 7882 18880;18881;18882;18883;18884 15197;15198;15199;15200 15200 4 321460 298930 LAAIVAK VQVLVLDGRGHLLGRLAAIVAKQVLLGRKV GRGHLLGRLAAIVAKQVLLGRKVVVVRCEG R L A A K Q 3 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 684.45341 P40429 P40429 19 25 RPL13A 60S ribosomal protein L13a yes yes 2 0.029703 104.94 By MS/MS 8.5 0.5 1 1 2 2539300 2539300 0 7630 859 7883 18885;18886 15201 15201 1 34073 0 LAALESSIEQR TLSQIETSIATVQEKLAALESSIEQRLKWA VQEKLAALESSIEQRLKWAGGANPALAPVL K L A Q R L 2 1 0 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1215.6459 Q96Q15 Q96Q15 3250 3260 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 2.3332E-05 160.75 By MS/MS 1 0 1 1 364930 364930 0 7631 2213 7884 18887 15202 15202 1 87936 0 LAALNPESNTAGLDIFAK EEFLEAVLCPPRYPKLAALNPESNTAGLDI LNPESNTAGLDIFAKFSAYIKNSNPALNDN K L A A K F 4 0 2 1 0 0 1 1 0 1 3 1 0 1 1 1 1 0 0 0 0 0 18 0 1843.968 O00299 O00299 96 113 CLIC1 Chloride intracellular channel protein 1 yes yes 2 0.00011286 179.65 By MS/MS 8 0 1 1 318880 318880 0 7632 98 7885 18888 15203 15203 1 4025.8 0 LAALPENPPAIDWAYYK IASSLKSWNETLTSRLAALPENPPAIDWAY ALPENPPAIDWAYYKANVAKAGLVDDFEKK R L A Y K A 4 0 1 1 0 0 1 0 0 1 2 1 0 0 3 0 0 1 2 0 0 0 17 0 1930.9829 O75947 O75947 42 58 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.0073389 91.62 By MS/MS 9 0 1 1 339820 339820 0 7633 356 7886 18889 15204;15205;15206 15204 3 6687.7 0 LAALPNVYEVISK FAGAVSPQEEEEFRRLAALPNVYEVISKSI RRLAALPNVYEVISKSIAPSIFGGTDMKKA R L A S K S 2 0 1 0 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 2 0 0 13 0 1415.8024 P33992 P33992 325 337 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0010423 125.36 By MS/MS 5 0.816 1 1 1 3 3157400 3157400 0 7634 807 7887 18890;18891;18892 15207 15207 1 217930 0 LAALTQGSYLHQR VHGRQQEILGVLVPRLAALTQGSYLHQRVC PRLAALTQGSYLHQRVCWRLVEQVPDRAME R L A Q R V 2 1 0 0 0 2 0 1 1 0 3 0 0 0 0 1 1 0 1 0 0 0 13 0 1456.7787 Q9Y4R8 Q9Y4R8 238 250 TELO2 Telomere length regulation protein TEL2 homolog yes yes 3 0.0078188 101.35 By MS/MS 4 0 1 1 1059900 1059900 0 7635 2900 7888 18893 15208 15208 1 99744 0 LAAMASIR RIWYLLDGKMQPPGKLAAMASIRLQGLHKP KMQPPGKLAAMASIRLQGLHKPVYHALSDC K L A I R L 3 1 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 8 0 831.46366 Q9BYD1 Q9BYD1 31 38 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.037419 86.794 By MS/MS 9 0 1 1 342720 342720 0 7636 2368 7889 18894 15209 15209 1081 1 6744.8 0 LAANDFFR AAVNLTLVTPEKAIKLAANDFFRHQLSKDG TPEKAIKLAANDFFRHQLSKDGQKLTLLKE K L A F R H 2 1 1 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 952.47667 Q9H936;Q9H1K4 Q9H936 84 91 SLC25A22;SLC25A18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 yes no 2 0.0029896 134.81 By MS/MS 8 0.816 1 1 1 3 14034000 14034000 0 7637 2480 7890 18895;18896;18897 15210 15210 1 178510 0 LAAPLLER ECHPHYASQTTVYEKLAAPLLERAFEGFNT QTTVYEKLAAPLLERAFEGFNTCLFAYGQT K L A E R A 2 1 0 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 8 0 881.53345 Q15058 Q15058 427 434 KIF14 Kinesin-like protein KIF14 yes yes 2 0.031911 89.369 By MS/MS 2.5 0.5 1 1 2 733020 733020 0 7638 1486 7891 18898;18899 15211 15211 1 149460 0 LAAPLLK ILLANKKDLEEAEGRLAAPLLKRLSLSTSK DLEEAEGRLAAPLLKRLSLSTSKLNSLAIG R L A L K R 2 0 0 0 0 0 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 7 0 724.48471 P54886 P54886 418 424 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.026004 107.73 By MS/MS By matching 5 0 2 1 1 5657500 5599300 58140 7639 1048 7892 18900;18901 15212 15212 1 56158 48825 LAAQSCALSLVR LGRRIFAREHGSNKKLAAQSCALSLVRQLY NKKLAAQSCALSLVRQLYHLGVVEAYSGLT K L A V R Q 3 1 0 0 1 1 0 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1287.6969 Q08211 Q08211 237 248 DHX9 ATP-dependent RNA helicase A yes yes 2 4.5347E-06 189.17 By MS/MS 2.8 1.33 1 1 2 1 5 2338900 2338900 0 7640 1307 7893 18902;18903;18904;18905;18906 15213;15214;15215;15216 15213 4 132350 0 LAATNALLNSLEFTK IIQGMRKEEPSNNVKLAATNALLNSLEFTK LAATNALLNSLEFTKANFDKESERHFIMQV K L A T K A 3 0 2 0 0 0 1 0 0 0 4 1 0 1 0 1 2 0 0 0 0 0 15 0 1604.8774 Q14974 Q14974 192 206 KPNB1 Importin subunit beta-1 yes yes 2 2.0766E-34 315.43 By MS/MS 5.67 1.25 1 1 1 3 1392100 1392100 0 7641 1462 7894 18907;18908;18909 15217;15218;15219;15220 15217 4 80877 0 LAAVAQGEEENASR VINTMLQLSPEEKGKLAAVAQGEEENASRS KLAAVAQGEEENASRSSGWASYLHSWSGLR K L A S R S 4 1 1 0 0 1 3 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 14 0 1443.6954 Q8IWJ2 Q8IWJ2 1656 1669 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 2 0.00026175 176.32 By MS/MS 2 0 1 1 208030 208030 0 7642 1868 7895 18910 15221 15221 1 70364 0 LAAVDATVNQVLASR AAASEVKEQTKGKVKLAAVDATVNQVLASR LAAVDATVNQVLASRYGIRGFPTIKIFQKG K L A S R Y 4 1 1 1 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 15 0 1526.8417 Q15084 Q15084 217 231 PDIA6 Protein disulfide-isomerase A6 yes yes 2 5.4355E-11 234.87 By MS/MS 7 0.816 1 1 1 3 9633700 9633700 0 7643 1488 7896 18911;18912;18913 15222 15222 1 69155 0 LAAVVSACK AVNLYGPDAQVDRSRLAAVVSACKQLHRAG QVDRSRLAAVVSACKQLHRAGLLHNILPSQ R L A C K Q 3 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 0 917.50044 P78527 P78527 1448 1456 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0079434 104.06 By MS/MS 2 0.816 1 1 1 3 3643400 3643400 0 7644 1225 7897 18914;18915;18916 15223;15224 15223 2 961700 0 LACDVDQVTR PMYQLYKRTFPVLLRLACDVDQVTRQLYEP PVLLRLACDVDQVTRQLYEPLVMQLIHWFT R L A T R Q 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1175.5605 P78527 P78527 972 981 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.7867E-07 183.72 By MS/MS 2.17 1.07 2 2 1 1 6 11208000 11208000 0 7645 1225 7898 18917;18918;18919;18920;18921;18922 15225;15226;15227;15228;15229;15230 15225 6 2739100 0 LACLSEEGNEIESGK EYVKSLTANPELIDRLACLSEEGNEIESGK LACLSEEGNEIESGKIIFSEHLPLSKLQQG R L A G K I 1 0 1 0 1 0 4 2 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1634.7458 Q9Y2L1 Q9Y2L1 211 225 DIS3 Exosome complex exonuclease RRP44 yes yes 2 6.3731E-33 304.38 By MS/MS 4 0 1 1 1949500 1949500 0 7646 2834 7899 18923 15231 15231 1 183460 0 LACMEEFQK PTCIQLLDSSNWKERLACMEEFQKAVELMD SNWKERLACMEEFQKAVELMDRTEMPCQAL R L A Q K A 1 0 0 0 1 1 2 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 9 0 1154.51 Q14008 Q14008 617 625 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0012196 131.22 By MS/MS 2 0 2 2 1620800 1620800 0 7647 1417 7900;7901 18924;18925 15232;15233 15233 809 2 548230 0 LADFGALHR MFAHRPRSWRELPLRLADFGALHRAEASGG RELPLRLADFGALHRAEASGGLGGLTRLRC R L A H R A 2 1 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 998.52976 Q9BW92 Q9BW92 430 438 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2;3 0.00047952 147.34 By MS/MS 5.2 0.748 1 2 2 5 9893500 9893500 0 7648 2346 7902 18926;18927;18928;18929;18930 15234;15235 15235 2 120730 0 LADFGLAR LKPQNLLIDDKGTIKLADFGLARAFGIPIR DDKGTIKLADFGLARAFGIPIRVYTHEVVT K L A A R A 2 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 861.47085 P06493;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q14004;P11802;P24941;Q00526;P50750;Q00535;Q9NYV4 P06493 144 151 CDK1;CDK6;CDK15;CDK14;CDK18;CDK16;CDK17;CDK13;CDK4;CDK2;CDK3;CDK9;CDK5;CDK12 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 13;Cyclin-dependent kinase 4;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 9;Cyclin-dependent-like kinase 5;Cyclin-dependent kinase 12 no no 2 0.010772 120.62 By MS/MS By MS/MS 5.71 2.19 1 1 2 1 2 5 2 17035000 16906000 128790 7649 496;718;1261;584;980;2639 7903 18931;18932;18933;18934;18935;18936;18937 15236;15237;15238;15239;15240 15238 5 317560 156430 LADGGATNQGR LLVAGTQGVNDGDMRLADGGATNQGRVEIF GDMRLADGGATNQGRVEIFYRGQWGTVCDN R L A G R V 2 1 1 1 0 1 0 3 0 0 1 0 0 0 0 0 1 0 0 0 0 0 11 0 1058.5105 Q08380 Q08380 26 36 LGALS3BP Galectin-3-binding protein yes yes 2 0.00099899 121.61 By MS/MS 5 0 1 1 309910 309910 0 7650 1309 7904 18938 15241 15241 1 3108.2 0 LADIEQSTGIR YPSQPDHTEKLTMWRLADIEQSTGIRLTES TMWRLADIEQSTGIRLTESLAMAPASAVSG R L A I R L 1 1 0 1 0 1 1 1 0 2 1 0 0 0 0 1 1 0 0 0 0 0 11 0 1201.6303 Q99707 Q99707 1192 1202 MTR Methionine synthase yes yes 2 1.019E-06 190.57 By MS/MS 3 0 1 1 1354900 1354900 0 7651 2260 7905 18939 15242 15242 1 24792 0 LADIQIEQLNR TELQAKVIDTQQKVKLADIQIEQLNRTKKH QKVKLADIQIEQLNRTKKHAHLTDTEIMTL K L A N R T 1 1 1 1 0 2 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1311.7147 O60925 O60925 29 39 PFDN1 Prefoldin subunit 1 yes yes 2 5.0959E-06 177.78 By MS/MS 10 0 1 1 2004100 2004100 0 7652 286 7906 18940 15243 15243 1 108020 0 LADLLGK MDVLNIQGVQRSLERLADLLGKIQKALGEY GVQRSLERLADLLGKIQKALGEYLERERSS R L A G K I 1 0 0 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 728.44324 Q14204 Q14204 1604 1610 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.017961 114.72 By MS/MS 2 0.816 1 1 1 3 1500400 1500400 0 7653 1433 7907 18941;18942;18943 15244;15245 15245 2 388850 0 LADPVTPVETILQR SEVGTILRNCVHVQKLADPVTPVETILQRC KLADPVTPVETILQRCNLEEISNYYGVSGF K L A Q R C 1 1 0 1 0 1 1 0 0 1 2 0 0 0 2 0 2 0 0 2 0 0 14 0 1550.8668 Q9NVN8 Q9NVN8 328 341 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 2 0.000417 138.63 By MS/MS 5 0 1 1 527480 527480 0 7654 2600 7908 18944 15246 15246 1 5290.4 0 LADQMRMLNFPQWFDLLK KVSQTEEIDTDVVVKLADQMRMLNFPQWFD QMRMLNFPQWFDLLKDIFSKFTIFLQRVKA K L A L K D 1 1 1 2 0 2 0 0 0 0 4 1 2 2 1 0 0 1 0 0 0 0 18 1 2265.1439 Q9P1Q0 Q9P1Q0 435 452 VPS54 Vacuolar protein sorting-associated protein 54 yes yes 3 0.048229 52.522 By matching By MS/MS 7.5 1.8 1 2 2 1 2 4 4 2807200 2419700 387490 7655 2671 7909 18945;18946;18947;18948;18949;18950;18951;18952 15247;15248;15249 15249 1136;1137 0 29376 491110 LADQSGLDVIR IHCKSVEEISTLVQKLADQSGLDVIRIRKP LVQKLADQSGLDVIRIRKPFHTDNPSIQGQ K L A I R I 1 1 0 2 0 1 0 1 0 1 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1185.6354 Q8N983 Q8N983 104 114 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.042467 73.9 By MS/MS 10 0 1 1 7432600 7432600 0 7656 1933 7910 18953 15250 15250 1 400590 0 LAEAAVAEKR RPKLSSTPPLSALGRLAEAAVAEKRAISPS SALGRLAEAAVAEKRAISPSIKEPSVVPIE R L A K R A 4 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1056.5928 Q8N201 Q8N201 92 101 INTS1 Integrator complex subunit 1 yes yes 2 0.0035413 122.94 By MS/MS 2 0 1 1 429690 429690 0 7657 1907 7911 18954 15251 15251 1 145340 0 LAEAGAR RPPIIDAPALALAQKLAEAGARCDFALFLG PALALAQKLAEAGARCDFALFLGASSENAG K L A A R C 3 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 686.37114 P27708 P27708 1522 1528 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.014396 123.99 By MS/MS 1.5 0.5 1 1 2 610070 610070 0 7658 745 7912 18955;18956 15252 15252 1 190510 0 LAEALYIADR GRGLQTVHINENFAKLAEALYIADRKAREA ENFAKLAEALYIADRKAREAVEMRAQVERK K L A D R K 3 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1133.6081 Q13573 Q13573 287 296 SNW1 SNW domain-containing protein 1 yes yes 2 0.021269 99.973 By MS/MS 5 0 1 1 619280 619280 0 7659 1398 7913 18957 15253 15253 0 6211.1 0 LAEAQIEELR QVEEVHQLSRKAETKLAEAQIEELRQKTQE KAETKLAEAQIEELRQKTQEEGEERAESEQ K L A L R Q 2 1 0 0 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1170.6245 Q9NR28 Q9NR28 208 217 DIABLO Diablo homolog, mitochondrial yes yes 2 0.005997 103.34 By MS/MS 9 0 1 1 1818100 1818100 0 7660 2544 7914 18958 15254 15254 1 35781 0 LAEAVQER AQEQRKPVRLESAERLAEAVQERQQYAWLC RLESAERLAEAVQERQQYAWLCSQLRRKAR R L A E R Q 2 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 914.48214 Q8N6R0 Q8N6R0 242 249 METTL13 Methyltransferase-like protein 13 yes yes 2 0.0061525 120.15 By MS/MS 5 0 1 1 1059200 1059200 0 7661 1929 7915 18959 15255 15255 1 10623 0 LAECCIAANK EAVQVYHANPRLWLRLAECCIAANKGTSEQ RLWLRLAECCIAANKGTSEQETKGLPSKKG R L A N K G 3 0 1 0 2 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1148.5318 Q9H9A5 Q9H9A5 395 404 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 2 0.0045125 106.68 By MS/MS 5 0 1 1 550240 550240 0 7662 2483 7916 18960 15256 15256 1 5518.6 0 LAEDAPNFDGPAAEGQPGQK EEPKYSSLYAQLCLRLAEDAPNFDGPAAEG PNFDGPAAEGQPGQKQSTTFRRLLISKLQD R L A Q K Q 4 0 1 2 0 2 2 3 0 0 1 1 0 1 3 0 0 0 0 0 0 0 20 0 2010.9283 P78344 P78344 139 158 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 3.7031E-26 279.19 By MS/MS 5.5 1.12 1 1 1 1 4 20332000 20332000 0 7663 1219 7917 18961;18962;18963;18964 15257;15258;15259 15259 3 1546800 0 LAEEMLGLAR ELDLVLQRHQNLQEKLAEEMLGLARSLKTN NLQEKLAEEMLGLARSLKTNTLAAQSVIKK K L A A R S 2 1 0 0 0 0 2 1 0 0 3 0 1 0 0 0 0 0 0 0 0 0 10 0 1101.5852 Q9NZ43 Q9NZ43 172 181 USE1 Vesicle transport protein USE1 yes yes 2 0.0025676 111.06 By MS/MS 8 0 1 1 395740 395740 0 7664 2644 7918 18965 15260 15260 1 4996.2 0 LAEENPDLQEAYIAK RIRSQIGNTESELKKLAEENPDLQEAYIAK LAEENPDLQEAYIAKQKRLKSKLLDHDNVK K L A A K Q 3 0 1 1 0 1 3 0 0 1 2 1 0 0 1 0 0 0 1 0 0 0 15 0 1702.8414 Q8TB36 Q8TB36 174 188 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes yes 2 0.00038086 168.76 By MS/MS 7 0 1 1 879590 879590 0 7665 1979 7919 18966 15261 15261 1 13808 0 LAEERHNRLEER RQSVYEEKLKQFEERLAEERHNRLEERKRQ EERLAEERHNRLEERKRQRKEERRITYYRE R L A E R K 1 3 1 0 0 0 4 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 12 2 1550.7914 Q14152 Q14152 783 794 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0024942 110.38 By MS/MS 3.75 0.829 2 1 1 4 12859000 12859000 0 7666 1422 7920 18967;18968;18969;18970 15262;15263;15264 15263 3 306460 0 LAEFGAAGVNR EVTLEANPTSAPGSRLAEFGAAGVNRLSIG PGSRLAEFGAAGVNRLSIGLQSLDDTELRL R L A N R L 3 1 1 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 1 0 0 11 0 1103.5724 Q9HA92 Q9HA92 142 152 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes yes 2 0.00025906 137.95 By MS/MS 6.5 0.5 1 1 2 1713700 1713700 0 7667 2491 7921 18971;18972 15265 15265 1 21394 0 LAEGEQILSGGVFNK QCKYLLAKCCVDLSKLAEGEQILSGGVFNK LAEGEQILSGGVFNKQKSHDDIVTEFGDSA K L A N K Q 1 0 1 0 0 1 2 3 0 1 2 1 0 1 0 1 0 0 0 1 0 0 15 0 1560.8148 P30260 P30260 85 99 CDC27 Cell division cycle protein 27 homolog yes yes 2 5.6156E-07 206.46 By MS/MS 3.33 1.7 1 1 1 3 3267200 3267200 0 7668 771 7922 18973;18974;18975 15266;15267;15268 15267 3 283980 0 LAEIQELHQSVR LRKLQDCRELESSRRLAEIQELHQSVRAAA SRRLAEIQELHQSVRAAAEEARRKEEVYKQ R L A V R A 1 1 0 0 0 2 2 0 1 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1421.7627 O60826 O60826 450 461 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.0001425 142.19 By MS/MS 5 0 1 1 1163100 1163100 0 7669 280 7923 18976 15269 15269 1 11666 0 LAEISHR LDEQEFVYKEPAITKLAEISHRLEGFYGER YKEPAITKLAEISHRLEGFYGERFGEDVVE K L A H R L 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 824.45045 Q96N67;Q96HP0 Q96N67 1870 1876 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 0.032587 102.77 By MS/MS 2 0 1 1 1809600 1809600 0 7670 2201;2166 7924 18977 15270 15270 1 612080 0 LAEKEKVDLVLLGK AERLGPLQVARVLAKLAEKEKVDLVLLGKQ KLAEKEKVDLVLLGKQAIDDDCNQTGQMTA K L A G K Q 1 0 0 1 0 0 2 1 0 0 4 3 0 0 0 0 0 0 0 2 0 0 14 2 1553.9392 P38117 P38117 111 124 ETFB Electron transfer flavoprotein subunit beta yes yes 3 0.016368 84.365 By MS/MS 8 0 1 1 307250 307250 0 7671 847 7925 18978 15271 15271 0 3879.1 0 LAELAQQR ADPEGPEGGCSLAWRLAELAQQRAAHTFLI GCSLAWRLAELAQQRAAHTFLIHGSRRFSY R L A Q R A 2 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 927.51378 Q5K4L6 Q5K4L6 71 78 SLC27A3 Long-chain fatty acid transport protein 3 yes yes 2 0.0069691 116.37 By MS/MS 5 0 1 1 572630 572630 0 7672 1615 7926 18979 15272 15272 1 5743.2 0 LAELCGVLK VLRSCGTLTLKPPGRLAELCGVLKAVLQRK LKPPGRLAELCGVLKAVLQRKTACQDTDEE R L A L K A 1 0 0 0 1 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1001.558 Q8TEX9 Q8TEX9 793 801 IPO4 Importin-4 yes yes 2 9.3389E-07 180.93 By MS/MS 3.5 1.12 1 1 1 1 4 4358200 4358200 0 7673 2005 7927 18980;18981;18982;18983 15273;15274 15273 2 493840 0 LAELEEALQK AEQRGELALKDARNKLAELEEALQKAKQDM DARNKLAELEEALQKAKQDMARLLREYQEL K L A Q K A 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1142.6183 CON__P13647;P13647 CON__P13647 432 441 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.00029265 140.83 By MS/MS By MS/MS 4.5 2.99 2 2 2 1 1 1 1 1 1 7 5 6727500 4730300 1997200 + 7674 52 7928 18984;18985;18986;18987;18988;18989;18990;18991;18992;18993;18994;18995 15275;15276;15277;15278;15279;15280;15281 15281 7 415090 927230 LAELEGALQK SEQQGEAALSDARCKLAELEGALQKAKQDM DARCKLAELEGALQKAKQDMACLIREYQEV K L A Q K A 2 0 0 0 0 1 2 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1070.5972 CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__Q61726;CON__P78386;A6NCN2;P78386 CON__O43790 368 377 KRT86;KRT81;KRT83;KRT87P;KRT85 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Putative keratin-87 protein;Keratin, type II cuticular Hb5 yes no 2 1.1214E-05 168.26 By MS/MS 10 0 1 1 600400 0 600400 + 7675 35 7929 18996 15282 15282 1 0 768680 LAELQAK ______________________________ LEALRRQRLAELQAKHGDPGDAAQQEAKHR R L A A K H 2 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 771.44905 O14737 O14737 14 20 PDCD5 Programmed cell death protein 5 yes yes 2 0.03068 104.21 By MS/MS 10 0 1 1 1556000 1556000 0 7676 136 7930 18997 15283 15283 1 83863 0 LAEMDRDLMVGK IRLFAKKQPGQLRTRLAEMDRDLMVGKLER RTRLAEMDRDLMVGKLERDLYTQQKVEILT R L A G K L 1 1 0 2 0 0 1 1 0 0 2 1 2 0 0 0 0 0 0 1 0 0 12 1 1376.6792 Q8WZA0 Q8WZA0 110 121 LZIC Protein LZIC yes yes 2 0.032365 69.598 By matching By MS/MS 3.5 0.5 1 1 1 1 471130 286000 185130 7677 2045 7931 18998;18999 15284 15284 984;985 1 26914 23565 LAEMPADSGYPAYLGAR STSRWAEALREISGRLAEMPADSGYPAYLG EMPADSGYPAYLGARLASFYERAGRVKCLG R L A A R L 4 1 0 1 0 0 1 2 0 0 2 0 1 0 2 1 0 0 2 0 0 0 17 0 1780.8454 P38606 P38606 365 381 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 5.9364E-07 210.93 By MS/MS 5 0 2 2 1926600 1926600 0 7678 849 7932;7933 19000;19001 15285;15286 15286 430 2 19323 0 LAENACTLADLTEGQVGK GQVVLIKQEKDREAKLAENACTLADLTEGQ NACTLADLTEGQVGKLLIRKSGRVQLLLGK K L A G K L 3 0 1 1 1 1 2 2 0 0 3 1 0 0 0 0 2 0 0 1 0 0 18 0 1888.92 P05423 P05423 311 328 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 2 7.6359E-34 362.62 By MS/MS 6 0 1 1 3651900 3651900 0 7679 493 7934 19002 15287 15287 1 25104 0 LAEPEKPR FGSKCLYRHAYPDGRLAEPEKPRKQLSSQG HAYPDGRLAEPEKPRKQLSSQGTVRFFNSV R L A P R K 1 1 0 0 0 0 2 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 8 1 938.51853 Q9H000 Q9H000 354 361 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 3 0.020571 89.142 By MS/MS 7 0 1 1 555720 555720 0 7680 2400 7935 19003 15288 15288 1 8723.7 0 LAEQQDLQR PVVYDVCDDQEIQKRLAEQQDLQRDIEQHS QEIQKRLAEQQDLQRDIEQHSAGVESVFNI R L A Q R D 1 1 0 1 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1099.5622 Q8WXH0 Q8WXH0 6063 6071 SYNE2 Nesprin-2 yes yes 2 0.040815 89.886 By MS/MS 1 0 1 1 0 0 0 7681 2039 7936 19004 15289 15289 1 0 0 LAETQNIAPSFVK TLKSRTRRLQSTSERLAETQNIAPSFVKGF ERLAETQNIAPSFVKGFLLRDRGSDVESLD R L A V K G 2 0 1 0 0 1 1 0 0 1 1 1 0 1 1 1 1 0 0 1 0 0 13 0 1416.7613 Q96TA2 Q96TA2 225 237 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.00012274 196.02 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 13433000 13433000 0 7682 2241 7937 19005;19006;19007;19008;19009;19010 15290;15291 15291 2 153220 0 LAETVFNFQEK ALVWESYKLDPYVQRLAETVFNFQEKVDDL YVQRLAETVFNFQEKVDDLLIIEEKIDLEV R L A E K V 1 0 1 0 0 1 2 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 11 0 1324.6663 Q14204 Q14204 836 846 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.2411E-09 232.41 By MS/MS 2 0.816 1 1 1 3 1500000 1500000 0 7683 1433 7938 19011;19012;19013 15292;15293 15292 2 395020 0 LAEVGQYEQVK IATWKSLDLIESLLRLAEVGQYEQVKQLFS SLLRLAEVGQYEQVKQLFSFPIKHCPDMLV R L A V K Q 1 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 11 0 1262.6507 A5YKK6 A5YKK6 460 470 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 3.4228E-13 206.49 By MS/MS 2.5 0.5 1 1 2 3492700 3492700 0 7684 19 7939 19014;19015 15294;15295 15294 2 858560 0 LAEYYGLYR RAEWERTCGPYHKQRLAEYYGLYRDLFHGA PYHKQRLAEYYGLYRDLFHGATFVPRVPLH R L A Y R D 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 3 0 0 0 9 0 1146.571 Q96DV4 Q96DV4 151 159 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.002505 114.89 By MS/MS 7 0 1 1 6861100 6861100 0 7685 2138 7940 19016 15296 15296 1 107710 0 LAFSSTAR YEAKYLSGIAHFLEKLAFSSTARFDSKDEI IAHFLEKLAFSSTARFDSKDEILLTLEKHG K L A A R F 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 2 1 0 0 0 0 0 8 0 851.45012 Q10713 Q10713 115 122 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 0.030906 89.752 By MS/MS 6 0 1 1 1122000 1122000 0 7686 1323 7941 19017 15297 15297 1 7712.8 0 LAGANPAVITCDELLLGHEK KNWYPRQKICYAKRKLAGANPAVITCDELL PAVITCDELLLGHEKAPAFRDYVAVARGSK K L A E K A 3 0 1 1 1 0 2 2 1 1 4 1 0 0 1 0 1 0 0 1 0 0 20 0 2120.0936 P78527 P78527 4051 4070 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0094616 79.545 By MS/MS 1.5 0.5 1 1 2 322870 322870 0 7687 1225 7942 19018;19019 15298;15299;15300 15298 3 99148 0 LAGAPALAPEPPLIPK SYGVVQLFDQPHPQRLAGAPALAPEPPLIP AGAPALAPEPPLIPKLLVQTIQETTGREDF R L A P K L 4 0 0 0 0 0 1 1 0 1 3 1 0 0 5 0 0 0 0 0 0 0 16 0 1553.9181 Q562E7 Q562E7 592 607 WDR81 WD repeat-containing protein 81 yes yes 2 0.00027767 136.5 By MS/MS 2 0 1 1 348520 348520 0 7688 1593 7943 19020 15301 15301 1 117880 0 LAGAPAPK VFGTAYCTALYLRQRLAGAPAPKAYVLGSP ALYLRQRLAGAPAPKAYVLGSPALAAELEA R L A P K A 3 0 0 0 0 0 0 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 8 0 723.42792 A6NDG6 A6NDG6 113 120 PGP Phosphoglycolate phosphatase yes yes 2 0.023239 96.048 By MS/MS 8 0 1 1 619420 619420 0 7689 20 7944 19021 15302 15302 1 7820.2 0 LAGATLLIFANK QDCQRELQSLLVEERLAGATLLIFANKQDL EERLAGATLLIFANKQDLPGALSSNAIREV R L A N K Q 3 0 1 0 0 0 0 1 0 1 3 1 0 1 0 0 1 0 0 0 0 0 12 0 1230.7336 P36404 P36404 115 126 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 1.2957E-08 212.03 By MS/MS 9 0 1 1 123690 123690 0 7690 832 7945 19022 15303;15304 15303 2 2434.3 0 LAGCTVFITGASR ______________________________ GRLAGCTVFITGASRGIGKAIALKAAKDGA R L A S R G 2 1 0 0 1 0 0 2 0 1 1 0 0 1 0 1 2 0 0 1 0 0 13 0 1351.6918 Q6YN16 Q6YN16 8 20 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 2 1.705E-08 160.91 By MS/MS 7 0 1 1 1573500 1573500 0 7691 1740 7946 19023 15305 15305 0 24701 0 LAGDHIEYYK LPEIQKFSSRIREAKLAGDHIEYYKASSEM IREAKLAGDHIEYYKASSEMALYQKKHGIK K L A Y K A 1 0 0 1 0 0 1 1 1 1 1 1 0 0 0 0 0 0 2 0 0 0 10 0 1207.5873 Q15070 Q15070 188 197 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.0013003 117.81 By MS/MS By matching 7 0 2 1 1 4116400 4093900 22546 7692 1487 7947 19024;19025 15306 15306 1 64267 40605 LAGESESNLR GAFFFLINGPEIMSKLAGESESNLRKAFEE EIMSKLAGESESNLRKAFEEAEKNAPAIIF K L A L R K 1 1 1 0 0 0 2 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1074.5306 P55072 P55072 278 287 VCP Transitional endoplasmic reticulum ATPase yes yes 2 3.5665E-08 199.46 By MS/MS By MS/MS 5 1.22 2 1 1 3 1 15281000 15145000 136080 7693 1054 7948 19026;19027;19028;19029 15307;15308;15309 15308 3 1148000 289950 LAGESESNLRK GAFFFLINGPEIMSKLAGESESNLRKAFEE IMSKLAGESESNLRKAFEEAEKNAPAIIFI K L A R K A 1 1 1 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 11 1 1202.6255 P55072 P55072 278 288 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.046267 89.029 By MS/MS 5.5 1.12 1 1 1 1 4 7199900 7199900 0 7694 1054 7949 19030;19031;19032;19033 15310 15310 1 454720 0 LAGFLDLTEQEFR IRSFLKLYTTMPVAKLAGFLDLTEQEFRIQ AKLAGFLDLTEQEFRIQLLVFKHKMKNLVW K L A F R I 1 1 0 1 0 1 2 1 0 0 3 0 0 2 0 0 1 0 0 0 0 0 13 0 1537.7777 Q9Y262 Q9Y262 475 487 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 7.7441E-17 249.83 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 9971800 9971800 0 7695 2814 7950 19034;19035;19036;19037;19038;19039 15311;15312;15313;15314;15315;15316;15317 15313 7 87272 0 LAGFTAR QALGRIVLAGREMTRLAGFTARITELMQVL LAGREMTRLAGFTARITELMQVLKDLNHGK R L A A R I 2 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 7 0 734.40752 P28288 P28288 384 390 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.039458 97.602 By MS/MS 5 0 1 1 2191300 2191300 0 7696 752 7951 19040 15318 15318 1 21977 0 LAGLFNEQR RTLGGLEMELRLRERLAGLFNEQRKGQRAK LRLRERLAGLFNEQRKGQRAKDVRENPRAM R L A Q R K 1 1 1 0 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1046.5509 Q9Y4L1 Q9Y4L1 283 291 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.00025866 154.12 By MS/MS 3 0 1 1 1580900 1580900 0 7697 2898 7952 19041 15319;15320 15319 2 28927 0 LAGLSAALLR GPAPGPAQLRCYAGRLAGLSAALLRTDSFV CYAGRLAGLSAALLRTDSFVGGRWLPAAAT R L A L R T 3 1 0 0 0 0 0 1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 10 0 983.61277 P51649 P51649 51 60 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 2 2.7558E-05 162.97 By MS/MS 6.5 0.5 1 1 2 998970 998970 0 7698 1003 7953 19042;19043 15321 15321 1 7548.7 0 LAGNTLGSR SDSPWFLSGSETLGRLAGNTLGSRWSSGVG SETLGRLAGNTLGSRWSSGVGGSGGGSSGR R L A S R W 1 1 1 0 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 887.48248 O95071 O95071 123 131 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0020347 120.87 By MS/MS 2.5 1.12 1 1 1 1 4 3017200 3017200 0 7699 384 7954 19044;19045;19046;19047 15322 15322 1 434020 0 LAGPQLVQMFIGDGAK LARACAAQTKATFLKLAGPQLVQMFIGDGA AGPQLVQMFIGDGAKLVRDAFALAKEKAPS K L A A K L 2 0 0 1 0 2 0 3 0 1 2 1 1 1 1 0 0 0 0 1 0 0 16 0 1643.8705 P17980 P17980 251 266 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.0004061 167.73 By MS/MS 6 0 1 1 378790 378790 0 7700 647 7955 19048 15323 15323 1 2603.9 0 LAGPVPAR PRDALPRLLPALAARLAGPVPARRPPEACE LPALAARLAGPVPARRPPEACEELRLALVQ R L A A R R 2 1 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 8 0 779.46537 Q86Y56 Q86Y56 125 132 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.033584 99.919 By MS/MS 4 0 1 1 0 0 0 7701 1850 7956 19049 15324 15324 1 0 0 LAGSLVTQAPISAR GDFLRSRFCKDVLPKLAGSLVTQAPISARA KLAGSLVTQAPISARAGPVYSHTLAFKLQL K L A A R A 3 1 0 0 0 1 0 1 0 1 2 0 0 0 1 2 1 0 0 1 0 0 14 0 1382.7882 O43156 O43156 956 969 TTI1 TELO2-interacting protein 1 homolog yes yes 2 0.00029473 168.98 By MS/MS 4 0 1 1 3446900 3446900 0 7702 192 7957 19050 15325 15325 1 324380 0 LAGTQPLEVLEAVQR NQYLTDPKFVERTLRLAGTQPLEVLEAVQR LAGTQPLEVLEAVQRSLVLQRPQTWADCVT R L A Q R S 2 1 0 0 0 2 2 1 0 0 3 0 0 0 1 0 1 0 0 2 0 0 15 0 1622.8992 P22314 P22314 679 693 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2;3 8.242E-11 224.25 By MS/MS 4.33 0.471 2 1 3 2140800 2140800 0 7703 691 7958 19051;19052;19053 15326;15327;15328 15326 3 185280 0 LAHCEELR IYLLVELTQTMLSKRLAHCEELRAQVMEVK QTMLSKRLAHCEELRAQVMEVKALPGMGTT R L A L R A 1 1 0 0 1 0 2 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1026.4917 O60841 O60841 850 857 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 0.043104 93.195 By MS/MS 2.5 0.5 1 1 2 569110 569110 0 7704 283 7959 19054;19055 15329 15329 1 65403 0 LAHEDAECEK EVDTERAMLEKEAERLAHEDAECEKLMELY KEAERLAHEDAECEKLMELYERLEELDADK R L A E K L 2 0 0 1 1 0 3 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1200.5081 Q9UG63 Q9UG63 179 188 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2;3 0.0063169 102.62 By MS/MS 5 0 2 2 1084000 1084000 0 7705 2719 7960 19056;19057 15330;15331 15330 2 10872 0 LAHEVGWK VVRLKPTRKFAYLGRLAHEVGWKYQAVTAT KFAYLGRLAHEVGWKYQAVTATLEEKRKEK R L A W K Y 1 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 8 0 938.4974 P40429 P40429 141 148 RPL13A 60S ribosomal protein L13a yes yes 3 0.053339 101.33 By MS/MS 8 0 1 1 536760 536760 0 7706 859 7961 19058 15332 15332 1 6776.6 0 LAHGFEILCSK PPSDPQYRAHELGMKLAHGFEILCSKCSPH LGMKLAHGFEILCSKCSPHFSDCKKSLVTA K L A S K C 1 0 0 0 1 0 1 1 1 1 2 1 0 1 0 1 0 0 0 0 0 0 11 0 1273.6489 O95905 O95905 304 314 ECD Protein SGT1 yes yes 3 0.016284 106.4 By MS/MS 5 0 1 1 917350 917350 0 7707 433 7962 19059 15333 15333 1 9200.6 0 LAHGLLEELK QQTVRKLLSSLGGFKLAHGLLEELKTVLSS LGGFKLAHGLLEELKTVLSSHKVLPLEALV K L A L K T 1 0 0 0 0 0 2 1 1 0 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1121.6445 Q92616 Q92616 600 609 GCN1L1 Translational activator GCN1 yes yes 2;3 0.00091808 131.62 By MS/MS 2 0 2 2 1023300 1023300 0 7708 2064 7963 19060;19061 15334;15335 15335 2 346120 0 LAHLGVQVK ATSFLLALEPELEARLAHLGVQVKGEDEEE PELEARLAHLGVQVKGEDEEENNLEVRETK R L A V K G 1 0 0 0 0 1 0 1 1 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 963.58655 P04843 P04843 81 89 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.00224 113.41 By MS/MS By matching 5 0 3 2 1 2472700 2423600 49139 7709 478 7964 19062;19063;19064 15336;15337 15336 2 24307 41266 LAHYNKR FVNDIFERIASEASRLAHYNKRSTITSREI RIASEASRLAHYNKRSTITSREIQTAVRLL R L A K R S 1 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 900.49298 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q99880 81 87 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 0.048811 124.32 By MS/MS 10 0 1 1 2820600 2820600 0 7710 279 7965 19065 15338 15338 1 152020 0 LAIKLPDDQIPK LRGRSFAGNLNTYKRLAIKLPDDQIPKTNC YKRLAIKLPDDQIPKTNCNVAVINVGAPAA R L A P K T 1 0 0 2 0 1 0 0 0 2 2 2 0 0 2 0 0 0 0 0 0 0 12 1 1349.7919 Q01813 Q01813 397 408 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 3 0.031702 69.261 By MS/MS 4.5 0.5 1 1 2 927230 927230 0 7711 1271 7966 19066;19067 15339 15339 1 34191 0 LAILQVGNR QVTQLKEQVPGFTPRLAILQVGNRDDSNLY PGFTPRLAILQVGNRDDSNLYINVKLKAAE R L A N R D 1 1 1 0 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 982.59236 P11586 P11586 38 46 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 6.5469E-07 187.63 By MS/MS 4 0 1 1 2107000 2107000 0 7712 582 7967 19068 15340 15340 1 198280 0 LAILYAK KAIDLFTDAIKLNPRLAILYAKRASVFVKL DAIKLNPRLAILYAKRASVFVKLQKPNAAI R L A A K R 2 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 0 7 0 790.49528 Q8IZP2;P50502;Q8NFI4 Q8IZP2 143 149 ST13P4;ST13;ST13P5 Putative protein FAM10A4;Hsc70-interacting protein;Putative protein FAM10A5 yes no 2 0.043355 94.669 By MS/MS 6 0 1 1 1898600 1898600 0 7713 976 7968 19069 15341 15341 1 13051 0 LAIWDTAGQER DFKVKTISVDGNKAKLAIWDTAGQERFRTL NKAKLAIWDTAGQERFRTLTPSYYRGAQGV K L A E R F 2 1 0 1 0 1 1 1 0 1 1 0 0 0 0 0 1 1 0 0 0 0 11 0 1258.6306 Q9NP72 Q9NP72 59 69 RAB18 Ras-related protein Rab-18 yes yes 2 3.2727E-05 157.78 By MS/MS 9 0 1 1 673440 673440 0 7714 2524 7969 19070 15342 15342 1 13253 0 LAIYGMLPK TAAQLHLRDPVAIVKLAIYGMLPKNLHRRT PVAIVKLAIYGMLPKNLHRRTMMERLHLFP K L A P K N 1 0 0 0 0 0 0 1 0 1 2 1 1 0 1 0 0 0 1 0 0 0 9 0 1004.5729 Q9BYD1 Q9BYD1 106 114 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0040743 110.61 By MS/MS 9.33 0.471 2 1 3 1882500 1882500 0 7715 2368 7970;7971 19071;19072;19073 15343;15344 15343 1082 2 40004 0 LAKADGIVSK GAIRRMGESDDSILRLAKADGIVSKNF___ DSILRLAKADGIVSKNF_____________ R L A S K N 2 0 0 1 0 0 0 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1000.5917 P63220 P63220 72 81 RPS21 40S ribosomal protein S21 yes yes 3 0.042549 71.221 By MS/MS By MS/MS 10 0 2 1 1 451710 343420 108300 7716 1200 7972 19074;19075 15345;15346 15346 2 18509 138650 LAKENAPAIIFIDEIDAIATK KYLGEGPRMVRDVFRLAKENAPAIIFIDEI PAIIFIDEIDAIATKRFDAQTGADREVQRI R L A T K R 5 0 1 2 0 0 2 0 0 5 1 2 0 1 1 0 1 0 0 0 0 0 21 1 2255.2413 P43686 P43686 253 273 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.00011522 110.64 By MS/MS 6 0 1 1 77721 77721 0 7717 900 7973 19076 15347;15348;15349 15349 3 534.27 0 LALAAQECER ELSPSSPMDAWILSRLALAAQECERGFLTR WILSRLALAAQECERGFLTRELSLVTHALH R L A E R G 3 1 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1159.5656 Q5ST30 Q5ST30 786 795 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.013098 90.149 By MS/MS 4 0 1 1 1163500 1163500 0 7718 1621 7974 19077 15350;15351 15350 2 109490 0 LALASLGYEK KDAFDKGSLFGGSVKLALASLGYEKSCVLF GGSVKLALASLGYEKSCVLFNCAALASQIA K L A E K S 2 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1063.5914 Q8WUM4 Q8WUM4 111 120 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.0025676 111.06 By MS/MS 4 0 1 1 2016300 2016300 0 7719 2018 7975 19078 15352 15352 1 189750 0 LALDLEIATYR LARLLRDYQELMNTKLALDLEIATYRTLLE MNTKLALDLEIATYRTLLEGEESRMSGECA K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 CON__P04264;P04264 P04264 473 483 KRT1 Keratin, type II cytoskeletal 1 no no 2 4.835E-05 161.17 By MS/MS By MS/MS 4.12 2.89 3 1 1 1 1 1 2 6 695590 68535 627060 + 7720 471;45 7976 19079;19080;19081;19082;19083;19084;19085;19086 15353;15354;15355;15356;15357;15358;15359;15360;15361;15362 15358 10 16515 524600 LALDVEIATYR LARLLRDYQELMNVKLALDVEIATYRKLLE MNVKLALDVEIATYRKLLEGEECRMSGDLS K L A Y R K 2 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 1 0 1 1 0 0 11 0 1262.6871 CON__P13647;P13647;CON__REFSEQ:XP_932229;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__ENSEMBL:ENSBTAP00000038253;CON__Q5XKE5;Q5XKE5 CON__P35908v2 471 481 KRT5;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79 no no 2 0.0026925 128.91 By MS/MS 3 0 1 1 99450 0 99450 + 7721 55;52;44;56;40;74;48;34;68 7977 19087 15363;15364 15364 2 0 12659 LALDYGIK DVNDKRQVSKERGEKLALDYGIKFMETSAK SKERGEKLALDYGIKFMETSAKANINVENA K L A I K F 1 0 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 891.50657 P61006 P61006 139 146 RAB8A Ras-related protein Rab-8A yes yes 2 0.0068584 116.88 By MS/MS 9 0 1 1 709960 709960 0 7722 1102 7978 19088 15365 15365 1 13972 0 LALEQQQLICK SFLFGGEFYSYYKCKLALEQQQLICKQQTP YKCKLALEQQQLICKQQTPELEPAATMPPL K L A C K Q 1 0 0 0 1 3 1 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1342.7279 Q8IWX8 Q8IWX8 60 70 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 2 7.6194E-05 153.97 By MS/MS 3 1.41 1 1 1 1 1 5 3093000 3093000 0 7723 1871 7979 19089;19090;19091;19092;19093 15366 15366 1 298770 0 LALFNPDVCWDR FIGTGATGATLYLLRLALFNPDVCWDRNNP LLRLALFNPDVCWDRNNPEPWNKLGPNDQY R L A D R N 1 1 1 2 1 0 0 0 0 0 2 0 0 1 1 0 0 1 0 1 0 0 12 0 1504.7133 O00483 O00483 36 47 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.00085475 127.87 By MS/MS 10 0 1 1 192970 192970 0 7724 109 7980 19094 15367;15368 15368 2 10400 0 LALGSFVEEYNNK VYAMNWSVRPDKRFRLALGSFVEEYNNKVQ FRLALGSFVEEYNNKVQLVGLDEESSEFIC R L A N K V 1 0 2 0 0 0 2 1 0 0 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1482.7355 P61962 P61962 34 46 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 2 0.00028282 186.74 By MS/MS 7.5 0.5 1 1 2 1014900 1014900 0 7725 1133 7981 19095;19096 15369 15369 1 15176 0 LALKYHPDKNPNEGEK KPNATQEELKKAYRKLALKYHPDKNPNEGE ALKYHPDKNPNEGEKFKQISQAYEVLSDAK K L A E K F 1 0 2 1 0 0 2 1 1 0 2 3 0 0 2 0 0 0 1 0 0 0 16 2 1851.9479 P31689 P31689 29 44 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 4 0.0052796 87.447 By MS/MS 6.5 0.5 1 1 2 3111800 3111800 0 7726 787 7982 19097;19098 15370 15370 1 27089 0 LALLHEGTGPR FVLSDEFSHLRPEQRLALLHEGTGPRVISA PEQRLALLHEGTGPRVISAFVEIIFDNSDN R L A P R V 1 1 0 0 0 0 1 2 1 0 3 0 0 0 1 0 1 0 0 0 0 0 11 0 1162.6459 Q9UQE7 Q9UQE7 62 72 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0065626 99.788 By MS/MS 3 0 1 1 2260700 2260700 0 7727 2807 7983 19099 15371 15371 1 41365 0 LALQGGIR LCFSAATREAQHAWRLALQGGIRLQGIVLQ EAQHAWRLALQGGIRLQGIVLQRSQAPAAR R L A I R L 1 1 0 0 0 1 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 826.50249 Q86XR2 Q86XR2 218 225 FAM129C Niban-like protein 2 yes yes 2 0.0025966 137.44 By MS/MS 4 0 1 1 1773500 1773500 0 7728 1847 7984 19100 15372 15372 1 166900 0 LALQLHPDRNPDDPQAQEK PRSASIKDIKKAYRKLALQLHPDRNPDDPQ LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE K L A E K F 2 1 1 3 0 3 1 0 1 0 3 1 0 0 3 0 0 0 0 0 0 0 19 1 2184.0923 Q9UBS4 Q9UBS4 48 66 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 3 4.0528E-05 137.32 By MS/MS 7 0 1 1 4086900 4086900 0 7729 2704 7985 19101 15373 15373 1 64157 0 LALSQAHSLVQAEAPR ALWEEQVLQKEKKDRLALSQAHSLVQAEAP ALSQAHSLVQAEAPR_______________ R L A P R - 4 1 0 0 0 2 1 0 1 0 3 0 0 0 1 2 0 0 0 1 0 0 16 0 1689.9162 Q9BSF4 Q9BSF4 245 260 C19orf52 Uncharacterized protein C19orf52 yes yes 2 8.2099E-11 228.17 By MS/MS 8 0 1 1 2828900 2828900 0 7730 2305 7986 19102 15374 15374 1 35715 0 LALVISELEGK GREKFKSRGVGELARLALVISELEGKAQQP ELARLALVISELEGKAQQPAAELMQDTRDF R L A G K A 1 0 0 0 0 0 2 1 0 1 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1170.686 Q12899 Q12899 235 245 TRIM26 Tripartite motif-containing protein 26 yes yes 2 1.3962E-06 185.81 By MS/MS 6.33 0.943 1 2 3 2086100 2086100 0 7731 1336 7987 19103;19104;19105 15375;15376;15377 15375 3 20923 0 LALVTGGEIASTFDHPELVK GVMAIEHADFAGVERLALVTGGEIASTFDH GGEIASTFDHPELVKLGSCKLIEEVMIGED R L A V K L 2 0 0 1 0 0 2 2 1 1 3 1 0 1 1 1 2 0 0 2 0 0 20 0 2096.1154 P78371 P78371 323 342 CCT2 T-complex protein 1 subunit beta yes yes 3 0.013606 73.597 By MS/MS 6 0 1 1 2282700 2282700 0 7732 1222 7988 19106 15378 15378 1 15692 0 LALYQTAIESAR PEAPHPGLETTLQERLALYQTAIESARQAG QERLALYQTAIESARQAGDSAKMRRYDRGL R L A A R Q 3 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 12 0 1334.7194 Q6P1N0 Q6P1N0 144 155 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.00080534 147.28 By MS/MS 3 0 1 1 0 0 0 7733 1701 7989 19107 15379 15379 1 0 0 LANEERDAENPDEPKEGVNR AKWIFKQDFSPEVLKLANEERDAENPDEPK RDAENPDEPKEGVNRSFLEVSEMEMDLGAI K L A N R S 2 2 3 2 0 0 5 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 20 2 2281.0571 Q9H2M9 Q9H2M9 958 977 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 4 0.042493 48.51 By MS/MS 3 0 1 1 597460 597460 0 7734 2431 7990 19108 15380 15380 1 10932 0 LANIDEEMLQK AYLLYAFTRIRSIARLANIDEEMLQKAARE SIARLANIDEEMLQKAARETKILLDHEKEW R L A Q K A 1 0 1 1 0 1 2 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 11 0 1302.649 P54136 P54136 547 557 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00018125 144.77 By MS/MS By MS/MS 5 0 3 2 1 10791000 10752000 39267 7735 1043 7991;7992 19109;19110;19111 15381;15382;15383 15383 576 2 107840 32976 LANILFTQELAR GEKFYNAGLAYCHSKLANILFTQELARRLK HSKLANILFTQELARRLKGSGVTTYSVHPG K L A A R R 2 1 1 0 0 1 1 0 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1387.7823 Q8TC12 Q8TC12 207 218 RDH11 Retinol dehydrogenase 11 yes yes 2 0.00033187 141.89 By MS/MS 8 0 1 1 4774600 4774600 0 7736 1988 7993 19112 15384 15384 1 60279 0 LANILFTR SEQSYNKSFCYSRSKLANILFTRELARRLE FCYSRSKLANILFTRELARRLEGTNVTVNV K L A T R E 1 1 1 0 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 8 0 946.56 Q9HBH5 Q9HBH5 222 229 RDH14 Retinol dehydrogenase 14 yes yes 2 0.0031942 133.86 By MS/MS 7.5 0.5 1 1 2 1200200 1200200 0 7737 2505 7994 19113;19114 15385;15386 15386 2 15583 0 LANLINAEER KKGCKRYWTKTIEKKLANLINAEERRDVSL TIEKKLANLINAEERRDVSLKDCMRRLFYN K L A E R R 2 1 2 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1141.6091 P52701 P52701 1015 1024 MSH6 DNA mismatch repair protein Msh6 yes yes 2 1.4779E-05 171.33 By MS/MS 3 0 1 1 558300 558300 0 7738 1020 7995 19115 15387;15388 15388 2 10215 0 LANLPEEVIQK IKGACPKSYGFNAARLANLPEEVIQKGHRK NAARLANLPEEVIQKGHRKAREFEKMNQSL R L A Q K G 1 0 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1252.7027 P52701 P52701 1305 1315 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.032577 79.07 By MS/MS 2.5 1.12 1 1 1 1 4 1631800 1631800 0 7739 1020 7996 19116;19117;19118;19119 15389 15389 1 110570 0 LANQAADYFGDAFK LKATRDKMKDAIIAKLANQAADYFGDAFKQ KLANQAADYFGDAFKQCQYKDTLPKEVFPV K L A F K Q 4 0 1 2 0 1 0 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 14 0 1529.7151 Q8WUM4 Q8WUM4 216 229 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 7.6609E-05 180.61 By MS/MS 4 0 1 1 1712800 1712800 0 7740 2018 7997 19120 15390 15390 1 161180 0 LANRAPEPTPQQVAQQQ VAVRLQMSERNILSRLANRAPEPTPQQVAQ NRAPEPTPQQVAQQQ_______________ R L A Q Q - 3 1 1 0 0 5 1 0 0 0 1 0 0 0 3 0 1 0 0 1 0 0 17 1 1874.9599 Q14839 Q14839 1896 1912 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.00028776 194.86 By MS/MS 3 1.41 1 1 1 1 1 5 3551100 3551100 0 7741 1459 7998 19121;19122;19123;19124;19125 15391;15392;15393;15394 15393 4 879080 0 LANVLFAR VVGWRQELRAYADTKLANVLFARELANQLE RAYADTKLANVLFARELANQLEATGVTCYA K L A A R E 2 1 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 902.53379 Q6UX07 Q6UX07 202 209 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.0018107 145.04 By MS/MS 7 0 1 1 1016100 1016100 0 7742 1733 7999 19126 15395 15395 1 15952 0 LAPDYDALDVANK NTLIRPDGEKKAYVRLAPDYDALDVANKIG VRLAPDYDALDVANKIGII___________ R L A N K I 3 0 1 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 13 0 1403.6933 P62750 P62750 140 152 RPL23A 60S ribosomal protein L23a yes yes 2 0.0011107 124.12 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 15757000 15369000 388000 7743 1168 8000 19127;19128;19129 15396;15397 15397 2 305900 884770 LAPEYEAAATR MLVEFFAPWCGHCKRLAPEYEAAATRLKGI HCKRLAPEYEAAATRLKGIVPLAKVDCTAN R L A T R L 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 11 0 1190.5932 P30101 P30101 63 73 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.00070724 127.42 By MS/MS By matching 6.75 0.829 2 1 1 3 1 6520700 6439100 81629 7744 768 8001 19130;19131;19132;19133 15398 15398 1 46609 83647 LAPITSDPTEATAVGAVEASFK EAAIYHLQLFEELRRLAPITSDPTEATAVG PTEATAVGAVEASFKCCSGAIIVLTKSGRS R L A F K C 5 0 0 1 0 0 2 1 0 1 1 1 0 1 2 2 3 0 0 2 0 0 22 0 2174.1107 P14618 P14618 401 422 PKM Pyruvate kinase PKM yes yes 2;3 2.4119E-06 185.67 By MS/MS 6 0 2 2 4302500 4302500 0 7745 614 8002 19134;19135 15399;15400 15399 2 29576 0 LAPITYPQGLAMAR LRDDKDTIERLRDKKLAPITYPQGLAMARE KLAPITYPQGLAMAREIGSVKYLECSALTQ K L A A R E 3 1 0 0 0 1 0 1 0 1 2 0 1 0 2 0 1 0 1 0 0 0 14 0 1500.8123 P60763 P60763 134 147 RAC3 Ras-related C3 botulinum toxin substrate 3 yes yes 2 0.00041691 142.19 By MS/MS 9 0 1 1 711000 711000 0 7746 1096 8003 19136 15401 15401 619 1 13993 0 LAPLLLGNPQPMVM FKFKQLKMPVRALLRLAPLLLGNPQPMVM_ RLAPLLLGNPQPMVM_______________ R L A V M - 1 0 1 0 0 1 0 1 0 0 4 0 2 0 3 0 0 0 0 1 0 0 14 0 1492.8146 Q9H1A4 Q9H1A4 1931 1944 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.00019805 141.48 By MS/MS 1.5 0.5 1 1 2 131300 131300 0 7747 2420 8004 19137;19138 15402;15403;15404 15404 1088;1089 3 38810 0 LAPTLSQLDR HYDPEQVINNILEERLAPTLSQLDRNLDRE ILEERLAPTLSQLDRNLDREMKPDPTPLLT R L A D R N 1 1 0 1 0 1 0 0 0 0 3 0 0 0 1 1 1 0 0 0 0 0 10 0 1112.619 Q9H1I8 Q9H1I8 510 519 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.011188 91.658 By MS/MS 4 0 1 1 2914700 2914700 0 7748 2422 8005 19139 15405 15405 1 274290 0 LAPVYLSNR WGQNEAADAMSRLARLAPVYLSNRGFSIGI MSRLARLAPVYLSNRGFSIGIGDVTPGQGL R L A N R G 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 9 0 1031.5764 O14802 O14802 686 694 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.014148 93.162 By MS/MS 3.5 0.5 1 1 2 2312100 2312100 0 7749 139 8006 19140;19141 15406 15406 1 81888 0 LAQAAQSSVATITR DTKVLVQNAAGSQEKLAQAAQSSVATITRL KLAQAAQSSVATITRLADVVKLGAASLGAE K L A T R L 4 1 0 0 0 2 0 0 0 1 1 0 0 0 0 2 2 0 0 1 0 0 14 0 1415.7732 Q9Y490 Q9Y490 2044 2057 TLN1 Talin-1 yes yes 2 5.1839E-12 246.63 By MS/MS 3.67 1.25 1 1 1 3 5442900 5442900 0 7750 2888 8007 19142;19143;19144 15407;15408 15407 2 1363500 0 LAQALLEQGGR CGPITSTTRFIFEKKLAQALLEQGGRLSSF FEKKLAQALLEQGGRLSSFYHHEAGVTALS K L A G R L 2 1 0 0 0 2 1 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1154.6408 Q86XL3 Q86XL3 106 116 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.00015298 157.38 By MS/MS 4 0 1 1 3857700 3857700 0 7751 1845 8008 19145 15409;15410 15410 2 363040 0 LAQATQER KFNSVKEKEERGIARLAQATQERTDLYAKQ EERGIARLAQATQERTDLYAKQGRGSQFTS R L A E R T 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 915.47739 Q9UQE7 Q9UQE7 365 372 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00027785 166.52 By MS/MS 2 0.816 1 1 1 3 2149900 2149900 0 7752 2807 8009 19146;19147;19148 15411;15412 15412 2 100060 0 LAQATQERTDLYAK KFNSVKEKEERGIARLAQATQERTDLYAKQ RLAQATQERTDLYAKQGRGSQFTSKEERDK R L A A K Q 3 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 2 0 1 0 0 0 14 1 1606.8315 Q9UQE7 Q9UQE7 365 378 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0020605 138.63 By MS/MS 3 0 1 1 418820 418820 0 7753 2807 8010 19149 15413 15413 1 7663.2 0 LAQAYYESTR NKKIDFTEFLLMVFKLAQAYYESTRKENLP LMVFKLAQAYYESTRKENLPISGHKHRKHS K L A T R K 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 0 2 0 0 0 10 0 1200.5775 CON__P20930;P20930 CON__P20930 81 90 FLG Filaggrin yes no 2 0.031501 93.442 By MS/MS 3 0 1 1 347580 0 347580 + 7754 53 8011 19150 15414 15414 1 0 44242 LAQDLVVEASDSK KSLQALKHQVDLAKRLAQDLVVEASDSKGT KRLAQDLVVEASDSKGTSDVLLQVETIAQE R L A S K G 2 0 0 2 0 1 1 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 13 0 1373.7038 Q03001 Q03001 5124 5136 DST Dystonin yes yes 2 0.001193 122.64 By MS/MS 1 0 1 1 119290 119290 0 7755 1285 8012 19151 15415 15415 1 28745 0 LAQEEAQHR LEEKGVQLDSAGLERLAQEEAQHRARQAEP SAGLERLAQEEAQHRARQAEPVQKQGLWLD R L A H R A 2 1 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1080.5312 Q5JTZ9 Q5JTZ9 472 480 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2;3 1.9334E-07 193.1 By MS/MS By matching 3.56 1.26 1 1 1 4 2 4 5 7053100 5104400 1948800 7756 1613 8013 19152;19153;19154;19155;19156;19157;19158;19159;19160 15416;15417;15418 15417 3 381560 378360 LAQEQGGGDNSLLVR ARQLGSRYFALVERRLAQEQGGGDNSLLVR LAQEQGGGDNSLLVRALDRFHRRLRAPGAL R L A V R A 1 1 1 1 0 2 1 3 0 0 3 0 0 0 0 1 0 0 0 1 0 0 15 0 1555.7954 Q9UID3 Q9UID3 356 370 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 7.5798E-11 229.56 By MS/MS 4.5 0.5 1 1 2 3160700 3160700 0 7757 2741 8014 19161;19162 15419;15420 15420 2 216680 0 LAQFDYGR NCVLKPATEGKRRLKLAQFDYGRKCSEVAR EGKRRLKLAQFDYGRKCSEVARLTEGMSGR K L A G R K 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 968.47158 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 506 513 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2 0.0081128 112.84 By MS/MS 5 0 1 1 11139000 11139000 0 7758 2598;1638 8015 19163 15421 15421 1 111720 0 LAQFDYGRK NCVLKPATEGKRRLKLAQFDYGRKCSEVAR GKRRLKLAQFDYGRKCSEVARLTEGMSGRE K L A R K C 1 1 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 9 1 1096.5665 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 506 514 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2 0.0046576 129.42 By MS/MS By matching 5 0 2 1 1 3171600 3151200 20469 7759 2598;1638 8016 19164;19165 15422 15422 1 31604 17190 LAQFEPSQR PPEDPSVPVALNIGKLAQFEPSQRQNQVGV ALNIGKLAQFEPSQRQNQVGVVPWSPPQSN K L A Q R Q 1 1 0 0 0 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 9 0 1074.5458 Q08211 Q08211 315 323 DHX9 ATP-dependent RNA helicase A yes yes 2 0.014177 93.111 By MS/MS 3 1.41 1 1 1 1 1 5 3896000 3896000 0 7760 1307 8017 19166;19167;19168;19169;19170 15423 15423 1 250250 0 LAQGEYIAPEK NGTLKIIDRKKHIFKLAQGEYIAPEKIENI HIFKLAQGEYIAPEKIENIYMRSEPVAQVF K L A E K I 2 0 0 0 0 1 2 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 11 0 1217.6292 P33121;Q9ULC5 P33121 562 572 ACSL1;ACSL5 Long-chain-fatty-acid--CoA ligase 1;Long-chain-fatty-acid--CoA ligase 5 yes no 2 0.0007027 127.51 By MS/MS 5 0 1 1 581390 581390 0 7761 799 8018 19171 15424 15424 1 5831 0 LAQGLTHLGK AQYHAKDPNNLFMVRLAQGLTHLGKGTLTL LFMVRLAQGLTHLGKGTLTLCPYHSDRQLM R L A G K G 1 0 0 0 0 1 0 2 1 0 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1036.6029 Q13200 Q13200 764 773 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00089163 125.71 By MS/MS 7 2.55 1 1 1 1 4 6177900 6177900 0 7762 1365 8019 19172;19173;19174;19175 15425;15426 15425 1 542600 0 LAQIREEK DKSELKAELERKKQRLAQIREEKKRKEEER LERKKQRLAQIREEKKRKEEERKKKETDQK R L A E K K 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 985.55564 Q13409;O14576 Q13409 18 25 DYNC1I2;DYNC1I1 Cytoplasmic dynein 1 intermediate chain 2;Cytoplasmic dynein 1 intermediate chain 1 yes no 2 0.021387 128.61 By MS/MS 5 0 1 1 2232300 2232300 0 7763 1379 8020 19176 15427 15427 1 22389 0 LAQLEAALQQAK AEEQGELAFQDAKTKLAQLEAALQQAKQDM KTKLAQLEAALQQAKQDMARQLRKYQELMN K L A A K Q 4 0 0 0 0 3 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1282.7245 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 345 356 KRT80 Keratin, type II cytoskeletal 80 yes no 2 8.229E-06 178.46 By MS/MS 3 0 1 1 358350 0 358350 + 7764 69 8021 19177 15428 15428 1 0 45612 LAQLEEAK GPFVADFADKLNEQKLAQLEEAKQASIQHI DKLNEQKLAQLEEAKQASIQHIQNAIDTEK K L A A K Q 2 0 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 900.49165 P24539 P24539 132 139 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.00046415 158.07 By MS/MS 9 0.816 1 1 1 3 31495000 31495000 0 7765 714 8022 19178;19179;19180 15429;15430 15430 2 469840 0 LAQLITQAK YTPMFGPEARTLVLRLAQLITQAKHTAKSI RTLVLRLAQLITQAKHTAKSISDQCAESPA R L A A K H 2 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 9 0 984.59678 Q9NXE4 Q9NXE4 596 604 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.0139 93.598 By MS/MS 4.5 0.5 1 1 2 1752400 1752400 0 7766 2624 8023 19181;19182 15431;15432 15432 2 92590 0 LAQLLEGYAR PFLVSVPASRLTYARLAQLLEGYARYSVSV LTYARLAQLLEGYARYSVSVFQPPFQPGRM R L A A R Y 2 1 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 10 0 1132.6241 O94966 O94966 856 865 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.0076735 99.568 By MS/MS 4 0.816 1 1 1 3 1184100 1184100 0 7767 379 8024 19183;19184;19185 15433;15434;15435 15435 3 76565 0 LAQQEKQEQVKIESLAK SSSIRERPPEEVAARLAQQEKQEQVKIESL QQEKQEQVKIESLAKSLEDALRQTASVTLQ R L A A K S 2 0 0 0 0 4 3 0 0 1 2 3 0 0 0 1 0 0 0 1 0 0 17 2 1969.0844 Q16891 Q16891 206 222 IMMT MICOS complex subunit MIC60 yes yes 3 0.00017789 135.61 By MS/MS 4.5 0.5 1 1 2 4865400 4865400 0 7768 1563 8025 19186;19187 15436 15436 1 408010 0 LAQQISDEASR PNPSSECMLRNVSVRLAQQISDEASRYMPD VSVRLAQQISDEASRYMPDICVIRAIQKII R L A S R Y 2 1 0 1 0 2 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1216.6048 Q93008 Q93008 1221 1231 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 2.9274E-05 158.08 By MS/MS 3 1.41 1 1 1 1 1 5 11825000 11825000 0 7769 2085 8026 19188;19189;19190;19191;19192 15437;15438;15439;15440 15437 4 2961800 0 LAQQPHQNQAK MGAERRLLSIKEAFRLAQQPHQNQAKLVVA EAFRLAQQPHQNQAKLVVALSRTYRTMDDK R L A A K L 2 0 1 0 0 4 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1261.6527 Q9BPX3 Q9BPX3 16 26 NCAPG Condensin complex subunit 3 yes yes 2 2.6192E-06 167.23 By MS/MS 3.5 0.5 1 1 2 728210 728210 0 7770 2279 8027 19193;19194 15441;15442 15442 2 36420 0 LAQSHHVK LIIGSGGREHTLAWKLAQSHHVKQVLVAPG EHTLAWKLAQSHHVKQVLVAPGNAGTACSE K L A V K Q 1 0 0 0 0 1 0 0 2 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 918.50355 P22102 P22102 21 28 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.0064572 118.74 By MS/MS 4 0 1 1 170350 170350 0 7771 688 8028 19195 15443 15443 1 16031 0 LAQTFSPSIDILK TDFIKTGHYDLRERKLAQTFSPSIDILKSS RKLAQTFSPSIDILKSSNLERHLHLMANKD K L A L K S 1 0 0 1 0 1 0 0 0 2 2 1 0 1 1 2 1 0 0 0 0 0 13 0 1431.7973 Q8IYQ7 Q8IYQ7 556 568 THNSL1 Threonine synthase-like 1 yes yes 2 0.00054233 134.38 By MS/MS 5 0 1 1 368740 368740 0 7772 1888 8029 19196 15444 15444 1 3698.3 0 LAQVSPELLLASVR MFVEYRKQLKLLLDRLAQVSPELLLASVRR RLAQVSPELLLASVRRVFSSTLQNWQTTRF R L A V R R 2 1 0 0 0 1 1 0 0 0 4 0 0 0 1 2 0 0 0 2 0 0 14 0 1494.877 O43592 O43592 415 428 XPOT Exportin-T yes yes 2 0.0010529 125.61 By MS/MS 5 0.816 1 1 1 3 600330 600330 0 7773 220 8030 19197;19198;19199 15445;15446;15447;15448 15445 4 42084 0 LAQYEPPQEEK KYEAIVEENKKLKAKLAQYEPPQEEKRAE_ LKAKLAQYEPPQEEKRAE____________ K L A E K R 1 0 0 0 0 2 3 0 0 0 1 1 0 0 2 0 0 0 1 0 0 0 11 0 1330.6405 Q99417 Q99417 90 100 MYCBP C-Myc-binding protein yes yes 2 0.0039325 121.61 By MS/MS By MS/MS 10 0 2 1 1 1053700 849420 204240 7774 2242 8031 19200;19201 15449;15450 15449 2 45781 261490 LAQYESKK DEEESEEAKRLREERLAQYESKKAKKPALV KRLREERLAQYESKKAKKPALVAKSSILLD R L A K K A 1 0 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 8 1 965.5182 P24534 P24534 123 130 EEF1B2 Elongation factor 1-beta yes yes 2 0.053655 104.44 By MS/MS 8.5 0.5 1 1 2 1999000 1999000 0 7775 713 8032 19202;19203 15451 15451 1 26171 0 LASAFTEEQAVLYNQR AAIEAFNKCKTIYEKLASAFTEEQAVLYNQ ASAFTEEQAVLYNQRVEEISPNIRYCAYNI K L A Q R V 3 1 1 0 0 2 2 0 0 0 2 0 0 1 0 1 1 0 1 1 0 0 16 0 1838.9163 Q9UHB9 Q9UHB9 221 236 SRP68 Signal recognition particle subunit SRP68 yes yes 2;3 1.009E-103 420.46 By MS/MS 5.33 0.471 2 1 3 6822100 6822100 0 7776 2728 8033 19204;19205;19206 15452;15453 15452 2 66370 0 LASALDLPLLR VNPSMVTKLRATFLKLASALDLPLLRINQA TFLKLASALDLPLLRINQANSPDLLSVSQY K L A L R I 2 1 0 1 0 0 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 11 0 1180.718 Q12768 Q12768 589 599 KIAA0196 WASH complex subunit strumpellin yes yes 2 0.0048081 104.42 By MS/MS 4 0 1 1 119190 119190 0 7777 1325 8034 19207 15454 15454 1 11217 0 LASALLAEQEPQPER EVAQREEELNSLKQKLASALLAEQEPQPER LASALLAEQEPQPERLVPVSPLPPKAALSR K L A E R L 3 1 0 0 0 2 3 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 15 0 1650.8577 O95396 O95396 28 42 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase yes yes 2 1.7406E-16 255.24 By MS/MS 7 0 1 1 1507700 1507700 0 7778 408 8035 19208 15455 15455 1 23668 0 LASCSADGTVR GDAVWGLAFSPTSQRLASCSADGTVRIWDP TSQRLASCSADGTVRIWDPSSSSPACLCTF R L A V R I 2 1 0 1 1 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1135.5292 Q9NRL3 Q9NRL3 559 569 STRN4 Striatin-4 yes yes 2 0.0011947 117.71 By MS/MS 4 0 1 1 1303200 1303200 0 7779 2555 8036 19209 15456 15456 1 122640 0 LASEEPPDDEEALATIR LIASTFVDQCKTVLKLASEEPPDDEEALAT SEEPPDDEEALATIRLLDVLCEMTVNTELL K L A I R L 3 1 0 2 0 0 4 0 0 1 2 0 0 0 2 1 1 0 0 0 0 0 17 0 1854.8847 Q9UBB4 Q9UBB4 289 305 ATXN10 Ataxin-10 yes yes 2 0.00011467 186.51 By MS/MS 7 0.816 1 1 1 3 11135000 11135000 0 7780 2693 8037 19210;19211;19212 15457 15457 1 151670 0 LASEPQDPAAVSLPTSSVPETR LAVFQMLKSMCAGQRLASEPQDPAAVSLPT PAAVSLPTSSVPETRGRNKGSAALGGALAL R L A T R G 3 1 0 1 0 1 2 0 0 0 2 0 0 0 4 4 2 0 0 2 0 0 22 0 2251.1332 Q6NZ67;Q6P582 Q6NZ67 85 106 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A no no 2;3 5.5921E-09 214.63 By MS/MS 9.33 0.471 2 1 3 4160400 4160400 0 7781 1694;1711 8038 19213;19214;19215 15458;15459;15460 15458 3 94891 0 LASFYEAAIPEMESAIK PLACQTFQKHDFCYRLASFYEAAIPEMESA SFYEAAIPEMESAIKKRRLEDSKLLGDLWQ R L A I K K 4 0 0 0 0 0 3 0 0 2 1 1 1 1 1 2 0 0 1 0 0 0 17 0 1868.923 Q9H1I8 Q9H1I8 279 295 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.00025903 140.01 By MS/MS 4 0 1 1 435480 435480 0 7782 2422 8039 19216 15461 15461 1091 1 40981 0 LASGEHIAAFCLTEPASGSDAASIR ILAGTEEQKAKYLPKLASGEHIAAFCLTEP CLTEPASGSDAASIRSRATLSEDKKHYILN K L A I R S 6 1 0 1 1 0 2 2 1 2 2 0 0 1 1 4 1 0 0 0 0 0 25 0 2530.2122 Q9H845 Q9H845 169 193 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 3 2.5538E-08 160.52 By MS/MS 6 0 1 1 2323600 2323600 0 7783 2471 8040 19217 15462 15462 1 15973 0 LASIVEQVSVLQNQGR AVVTRGDECGLALGRLASIVEQVSVLQNQG ASIVEQVSVLQNQGREMMLVTSGAVAFGKQ R L A G R E 1 1 1 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 0 3 0 0 16 0 1739.953 P54886 P54886 95 110 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 3.8296E-33 304.89 By MS/MS 5 0.707 1 2 1 4 5924900 5924900 0 7784 1048 8041 19218;19219;19220;19221 15463;15464;15465 15464 3 90896 0 LASIYAAQNR GMKQEDNAIIEISLKLASIYAAQNRQEFAV EISLKLASIYAAQNRQEFAVAGYEFCISTL K L A N R Q 3 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1105.588 Q6DKK2 Q6DKK2 185 194 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 1.2432E-07 189.7 By MS/MS 7 0.816 1 1 1 3 2457800 2457800 0 7785 1676 8042 19222;19223;19224 15466 15466 1 25761 0 LASLEELKR NLQKYQAECSQFKAKLASLEELKRQAELDG SQFKAKLASLEELKRQAELDGKSAKQNLDK K L A K R Q 1 1 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 1 1057.6132 P15924 P15924 1076 1084 DSP Desmoplakin yes yes 2;3 1.9933E-05 184.49 By MS/MS By MS/MS 3 0.632 1 3 1 3 2 4186800 1655800 2531000 7786 628 8043 19225;19226;19227;19228;19229 15467;15468;15469 15467 2 337450 322160 LASLGLK LTPLGREQAELTGLRLASLGLKFNKIVHSS QAELTGLRLASLGLKFNKIVHSSMTRAIET R L A L K F 1 0 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 7 0 700.44833 Q96HS1 Q96HS1 135 141 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.029272 105.27 By MS/MS 8.5 0.5 1 1 2 18577000 18577000 0 7787 2168 8044 19230;19231 15470;15471 15470 2 247770 0 LASLQQENK GIVISPFRLEELTNRLASLQQENKVLKIEL EELTNRLASLQQENKVLKIELETYKLKCKA R L A N K V 1 0 1 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1029.5455 Q16204 Q16204 63 71 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.0077345 109.48 By MS/MS 5 0 1 1 419700 419700 0 7788 1544 8045 19232 15472 15472 1 4209.4 0 LASNALQEPSSFR AVTPVTILVFCGPARLASNALQEPSSFRVD ARLASNALQEPSSFRVDGIPNDSSDSEMED R L A F R V 2 1 1 0 0 1 1 0 0 0 2 0 0 1 1 3 0 0 0 0 0 0 13 0 1418.7154 Q9H6S0 Q9H6S0 1069 1081 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 1.9584E-11 231.66 By MS/MS 2 0.816 1 1 1 3 1360500 1360500 0 7789 2458 8046 19233;19234;19235 15473 15473 1 129750 0 LASQADSTEQVDDTILT SLEVLNEVNRRSLKKLASQADSTEQVDDTI SQADSTEQVDDTILT_______________ K L A L T - 2 0 0 3 0 2 1 0 0 1 2 0 0 0 0 2 3 0 0 1 0 0 17 0 1805.8531 Q92616 Q92616 2655 2671 GCN1L1 Translational activator GCN1 yes yes 2 0.00023766 142.97 By MS/MS 2 0.816 1 1 1 3 1148900 1148900 0 7790 2064 8047 19236;19237;19238 15474;15475 15474 2 320040 0 LASQANIAQVLAELK DPIYVKLEKLDIMIRLASQANIAQVLAELK LASQANIAQVLAELKEYATEVDVDFVRKAV R L A L K E 4 0 1 0 0 2 1 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1567.8934 Q10567 Q10567 345 359 AP1B1 AP-1 complex subunit beta-1 no no 2 0.00062782 130.47 By MS/MS 4 0 1 1 48264 48264 0 7791 1322 8048 19239 15476 15476 1 4542 0 LASSVLR ______________________________ SMLRLQKRLASSVLRCGKKKVWLDPNETNE R L A L R C 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 7 0 744.44939 P84098 P84098 10 16 RPL19 60S ribosomal protein L19 yes yes 2 0.039458 97.602 By MS/MS By matching 8 0 2 1 1 3309200 3233100 76156 7792 1247 8049 19240;19241 15477 15477 1 40817 102770 LASTIADNQEQDLEK QCENLKDTVENLTAKLASTIADNQEQDLEK LASTIADNQEQDLEKTRQYSQKLGLLTEQL K L A E K T 2 0 1 2 0 2 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 15 0 1673.8108 Q96R06 Q96R06 852 866 SPAG5 Sperm-associated antigen 5 yes yes 2 1.5402E-07 220.53 By MS/MS 3 0 1 1 477120 477120 0 7793 2219 8050 19242 15478 15478 1 8730 0 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK NGKNIEDVIAQGIGKLASVPAGGAVAVSAA AAPAAGSAPAAAEEKKDEKKEESEESDDDM K L A E K K 14 0 0 0 0 0 2 4 0 0 1 1 0 0 4 4 0 0 0 3 0 0 33 0 2773.4246 P05387 P05387 62 94 RPLP2 60S acidic ribosomal protein P2 yes yes 3 5.7154E-23 204.89 By MS/MS 10 0 1 1 1188500 1188500 0 7794 490 8051 19243 15479 15479 1 64055 0 LASYLDK LSGNEKVTMQNLNDRLASYLDKVRALEESN TMQNLNDRLASYLDKVRALEESNYELEGKI R L A D K V 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 7 0 808.43307 CON__P13645;P13645;CON__P05784;CON__Q99456;Q99456;P35527;CON__P35527;CON__Q04695;Q04695;CON__P02533;P02533;CON__P08779;P08779 CON__P13645 157 163 KRT10;KRT12;KRT9;KRT17;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 9;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 1;2 0.0050111 155.51 By MS/MS By MS/MS 5.52 2.76 3 1 2 2 3 3 3 2 2 2 13 10 111790000 47767000 64020000 + 7795 50;822;39;47;57 8052 19244;19245;19246;19247;19248;19249;19250;19251;19252;19253;19254;19255;19256;19257;19258;19259;19260;19261;19262;19263;19264;19265;19266 15480;15481;15482;15483;15484;15485;15486;15487;15488;15489;15490;15491;15492 15489 11 3675100 29177000 LASYLDKVQALEEANNDLENK LTANEKSTMQELNSRLASYLDKVQALEEAN KVQALEEANNDLENKIQDWYDKKGPAAIQK R L A N K I 3 0 3 2 0 1 3 0 0 0 4 2 0 0 0 1 0 0 1 1 0 0 21 1 2376.1809 P35527;CON__P35527 P35527 164 184 KRT9 Keratin, type I cytoskeletal 9 yes no 3 9.7226E-13 225.86 By MS/MS By MS/MS 4.33 1.25 1 1 1 2 1 8107400 7944900 162500 + 7796 822 8053 19267;19268;19269 15493;15494;15495;15496 15495 4 125920 20684 LASYLDKVR LSGNEKVTMQNLNDRLASYLDKVRALEESN QNLNDRLASYLDKVRALEESNYELEGKIKE R L A V R A 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1063.6026 CON__P13645;P13645;CON__Q99456;Q99456;CON__Q04695;Q04695;CON__P02533;P02533;CON__P08779;P08779 CON__P13645 157 165 KRT10;KRT12;KRT17;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2;3 0.00091962 154.12 By MS/MS By MS/MS 5.45 2.74 3 3 3 4 4 4 2 5 2 3 17 16 500570000 209630000 290940000 + 7797 50;39;47;57 8054 19270;19271;19272;19273;19274;19275;19276;19277;19278;19279;19280;19281;19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296;19297;19298;19299;19300;19301;19302 15497;15498;15499;15500;15501;15502;15503;15504;15505;15506;15507;15508;15509;15510;15511;15512;15513;15514;15515;15516;15517;15518;15519;15520;15521;15522;15523;15524 15510 28 14458000 70181000 LATAHAK RTSPVTARTLETLIRLATAHAKARMSKTVD RTLETLIRLATAHAKARMSKTVDLQDAEEA R L A A K A 3 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 710.40752 P25205 P25205 624 630 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.034662 101.21 By MS/MS 4 0 1 1 265740 265740 0 7798 719 8055 19303 15525 15525 1 25008 0 LATATFAGIENK ADLPPANPDHIGGYRLATATFAGIENKFGL GYRLATATFAGIENKFGLYLPKFKSPSVAV R L A N K F 3 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 2 0 0 0 0 0 12 0 1234.6558 O75746 O75746 641 652 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 4.2831E-25 283.58 By MS/MS 5 0 1 1 7036000 7036000 0 7799 344 8056 19304 15526 15526 1 70567 0 LATCSSDR EDMIHDAQMDYYGTRLATCSSDRSVKIFDV MDYYGTRLATCSSDRSVKIFDVRNGGQILI R L A D R S 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 8 0 908.40218 P55735 P55735 28 35 SEC13 Protein SEC13 homolog yes yes 2 0.0049312 125.81 By MS/MS 7.5 0.5 1 1 2 1846200 1846200 0 7800 1060 8057 19305;19306 15527 15527 1 28329 0 LATEFELR QKTAVEKAGPEMDKRLATEFELRKHARQEG GPEMDKRLATEFELRKHARQEGRRYCDPVV R L A L R K 1 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 977.5182 A5YKK6 A5YKK6 1523 1530 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0075442 113.71 By MS/MS 2 0 1 1 1351900 1351900 0 7801 19 8058 19307 15528 15528 1 457280 0 LATEFELRK QKTAVEKAGPEMDKRLATEFELRKHARQEG PEMDKRLATEFELRKHARQEGRRYCDPVVL R L A R K H 1 1 0 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 9 1 1105.6132 A5YKK6 A5YKK6 1523 1531 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.012209 111.74 By MS/MS 2.5 0.5 1 1 2 1144400 1144400 0 7802 19 8059 19308;19309 15529 15529 1 280250 0 LATELYHQK DLIKEVLSMDDEIQKLATELYHQKSVLIMG DDEIQKLATELYHQKSVLIMGRGYHYATCL K L A Q K S 1 0 0 0 0 1 1 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 9 0 1101.5819 Q06210 Q06210 548 556 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.006263 107.01 By MS/MS 5 0 1 1 699120 699120 0 7803 1295 8060 19310 15530 15530 1 7011.8 0 LATFWYYAK TPALVNAAVTYSKPRLATFWYYAKVELVPP TYSKPRLATFWYYAKVELVPPTPAEIPRAI R L A A K V 2 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 1 2 0 0 0 9 0 1161.5859 O75964 O75964 27 35 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 0.0023078 117.4 By MS/MS 10 0 1 1 206920 206920 0 7804 357 8061 19311 15531 15531 1 11152 0 LATLCPAPVLQR DHYDIRMLTFIMVARLATLCPAPVLQRVDR VARLATLCPAPVLQRVDRLIEPLRATCTAK R L A Q R V 2 1 0 0 1 1 0 0 0 0 3 0 0 0 2 0 1 0 0 1 0 0 12 0 1337.7489 O75155 O75155 1135 1146 CAND2 Cullin-associated NEDD8-dissociated protein 2 yes yes 2 0.0038646 106.88 By MS/MS 3.5 0.5 1 1 2 587990 587990 0 7805 301 8062 19312;19313 15532 15532 1 30034 0 LATLLGLQAPPTR RLLDMDGIIVEKQRRLATLLGLQAPPTRIG RRLATLLGLQAPPTRIGLINDMVRFNVLQY R L A T R I 2 1 0 0 0 1 0 1 0 0 4 0 0 0 2 0 2 0 0 0 0 0 13 0 1349.8031 Q14152 Q14152 355 367 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00017382 165.63 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 7829900 7829900 0 7806 1422 8063 19314;19315;19316;19317;19318;19319 15533;15534;15535;15536;15537;15538 15536 6 507650 0 LATNAAVTVLR AGILDTYLGKYWAIKLATNAAVTVLRVDQI WAIKLATNAAVTVLRVDQIIMAKPAGGPKP K L A L R V 3 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 2 0 0 11 0 1127.6663 P50990 P50990 510 520 CCT8 T-complex protein 1 subunit theta yes yes 2 5.5379E-07 196.44 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 39211000 39211000 0 7807 984 8064 19320;19321;19322;19323;19324;19325 15539;15540;15541;15542 15542 4 329200 0 LATNTSAPDLK PTSAKPSSTTPRLSRLATNTSAPDLKNVRS RLSRLATNTSAPDLKNVRSKVGSTENIKHQ R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 P27816 P27816 923 933 MAP4 Microtubule-associated protein 4 yes yes 2 0.055665 65.627 By MS/MS 2 0 1 1 2005700 2005700 0 7808 746 8065 19326 15543 15543 1 678420 0 LATPELLETAQALER EVNEILFCQLHPEQKLATPELLETAQALER LATPELLETAQALERTLRKPGRGWDDTYVL K L A E R T 3 1 0 0 0 1 3 0 0 0 4 0 0 0 1 0 2 0 0 0 0 0 15 0 1653.8938 Q8N6R0 Q8N6R0 660 674 METTL13 Methyltransferase-like protein 13 yes yes 2 0.00038086 168.76 By MS/MS 5 0 1 1 534730 534730 0 7809 1929 8066 19327 15544 15544 1 5363.1 0 LATQLTGPVMPVR PSAPKKGDSSAEELKLATQLTGPVMPVRNV LKLATQLTGPVMPVRNVYKKEKARVITEEE K L A V R N 1 1 0 0 0 1 0 1 0 0 2 0 1 0 2 0 2 0 0 2 0 0 13 0 1381.7752 P26373 P26373 146 158 RPL13 60S ribosomal protein L13 yes yes 2 3.8285E-08 220.82 By MS/MS 8 0 2 2 3746300 3746300 0 7810 731 8067;8068 19328;19329 15545;15546 15545 366 2 47297 0 LATQSNEITIPVTFESR LSPEGTLTVEAPMPKLATQSNEITIPVTFE TQSNEITIPVTFESRAQLGGPEAAKSDETA K L A S R A 1 1 1 0 0 1 2 0 0 2 1 0 0 1 1 2 3 0 0 1 0 0 17 0 1904.9844 P04792 P04792 172 188 HSPB1 Heat shock protein beta-1 yes yes 2 1.9576E-11 243.49 By MS/MS 8 0 1 1 843290 843290 0 7811 477 8069 19330 15547 15547 1 10646 0 LATVGDLEEIQR ANQILHVTWCEFRARLATVGDLEEIQRAHA RARLATVGDLEEIQRAHAEYLHKAVFRGLL R L A Q R A 1 1 0 1 0 1 2 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1342.7092 Q96RT7 Q96RT7 1700 1711 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 1.7905E-06 197.79 By MS/MS 2 0 1 1 622020 622020 0 7812 2226 8070 19331 15548 15548 1 210390 0 LAVASVTEILK RKSLAGMLTPYVARKLAVASVTEILKMLNS VARKLAVASVTEILKMLNSNTESPYLIWNN K L A L K M 2 0 0 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 11 0 1142.6911 O75165 O75165 1621 1631 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 2.1058E-05 162.88 By MS/MS 2 0 1 1 206950 206950 0 7813 302 8071 19332 15549 15549 1 69998 0 LAVATFAGIENK INLPAPNPDHVGGYKLAVATFAGIENKFGL GYKLAVATFAGIENKFGLYLPLFKPSVSTS K L A N K F 3 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1232.6765 Q9UJS0 Q9UJS0 642 653 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 1.8505E-13 246.63 By MS/MS 6.5 1.5 1 1 2 12844000 12844000 0 7814 2748 8072 19333;19334 15550;15551 15550 1 129460 0 LAVDEEENADNNTK LARQVDGDNSHVEMKLAVDEEENADNNTKA KLAVDEEENADNNTKANVTKPKRCSGSICY K L A T K A 2 0 3 2 0 0 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 14 0 1560.6904 P02786 P02786 40 53 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 2.2147E-56 356.2 By MS/MS 9.5 0.5 1 1 2 778440 778440 0 7815 458 8073 19335;19336 15552;15553 15553 2 32105 0 LAVEALSSLDGDLAGR LPPHCSRGERRAIEKLAVEALSSLDGDLAG AVEALSSLDGDLAGRYYALKSMTEAEQQQL K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 P12277 P12277 157 172 CKB Creatine kinase B-type yes yes 2 5.9018E-17 264.3 By MS/MS 7 0 2 2 886340 886340 0 7816 592 8074 19337;19338 15554;15555 15554 2 13914 0 LAVEAVLR LSSKLLTHHKDHFTKLAVEAVLRLKGSGNL HKDHFTKLAVEAVLRLKGSGNLEAIHIIKK K L A L R L 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 P78371 P78371 182 189 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0096178 121.99 By MS/MS 7 0.816 1 1 1 3 5206600 5206600 0 7817 1222 8075 19339;19340;19341 15556;15557 15556 2 77140 0 LAVLDPALSPQR HACASMCDEMVTLWRLAVLDPALSPQRRRE LWRLAVLDPALSPQRRRELCTQLRQWQLKV R L A Q R R 2 1 0 1 0 1 0 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 1278.7296 A7E2V4 A7E2V4 429 440 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 2 0.0090101 91.855 By MS/MS 1.5 0.5 1 1 2 314080 314080 0 7818 27 8076 19342;19343 15558 15558 1 102290 0 LAVLKYYKVDENGK YTTPKKNKHKRKKVKLAVLKYYKVDENGKI KLAVLKYYKVDENGKISRLRRECPSDECGA K L A G K I 1 0 1 1 0 0 1 1 0 0 2 3 0 0 0 0 0 0 2 2 0 0 14 2 1638.8981 P62979 P62979 100 113 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 3 0.0046442 102.73 By MS/MS 10 0 1 1 476460 476460 0 7819 1190 8077 19344 15559 15559 1 25679 0 LAVNMVPFPR TCLRFPGQLNADLRKLAVNMVPFPRLHFFM ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG K L A P R L 1 1 1 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 2 0 0 10 0 1142.627 P04350;P68371;Q3ZCM7;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 253 262 TUBB4A;TUBB4B;TUBB8;TUBB1;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 1;2 1.3091E-07 188.98 By MS/MS By MS/MS 7 0.953 4 4 2 1 9 2 164970000 164810000 168180 7820 1212;509;1412;2331;472;1393;2324 8078;8079 19345;19346;19347;19348;19349;19350;19351;19352;19353;19354;19355 15560;15561;15562;15563;15564;15565;15566;15567;15568;15569 15568 178 9 1269100 195140 LAVQFTNR AGLCPAACMQTPRMKLAVQFTNRNQYCYGS MQTPRMKLAVQFTNRNQYCYGSRDLLGLHN K L A N R N 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8 0 947.51886 Q7L8L6 Q7L8L6 697 704 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.005039 125.31 By MS/MS 5 0 1 1 3042900 3042900 0 7821 1771 8080 19356 15570 15570 1 30519 0 LAVSSLLR PLSLKYSCPSESTWKLAVSSLLRVLSIGLP PSESTWKLAVSSLLRVLSIGLPVARQHASS K L A L R V 1 1 0 0 0 0 0 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 8 0 857.53345 Q7Z3U7 Q7Z3U7 1461 1468 MON2 Protein MON2 homolog yes yes 2 0.044512 84.568 By MS/MS 2 0 1 1 509590 509590 0 7822 1787 8081 19357 15571 15571 1 172360 0 LAVVDPLFGMQPIR ENVNGYTNCCFGFHRLAVVDPLFGMQPIRV RLAVVDPLFGMQPIRVKKYPYLWLCYNGEI R L A I R V 1 1 0 1 0 1 0 1 0 1 2 0 1 1 2 0 0 0 0 2 0 0 14 0 1554.8592 P08243 P08243 50 63 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.0032345 120.77 By MS/MS 6 0 1 1 1479300 1479300 0 7823 523 8082 19358 15572 15572 226 0 10169 0 LAWGQPVGLR ERTDFKEEPEPGFKRLAWGQPVGLRHTGYV PGFKRLAWGQPVGLRHTGYVIELQHVVKGP R L A L R H 1 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 0 1 0 1 0 0 10 0 1095.6189 P47897 P47897 630 639 QARS Glutamine--tRNA ligase yes yes 2 0.0012521 118.74 By MS/MS 4.5 0.5 1 1 2 1476100 1476100 0 7824 928 8083 19359;19360 15573 15573 1 107200 0 LAWTLTANQPSSQATTSK APGVGDCLRQQLGSRLAWTLTANQPSSQAT TLTANQPSSQATTSKGVPSAVSRNMTRSRR R L A S K G 3 0 1 0 0 2 0 0 0 0 2 1 0 0 1 3 4 1 0 0 0 0 18 0 1903.964 Q96CW5 Q96CW5 203 220 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 3.4015E-11 279.65 By MS/MS 4 0 1 1 907870 907870 0 7825 2128 8084 19361 15574 15574 1 85436 0 LAYELYTEALGIDPNNIK KKEDGNKAFKEGNYKLAYELYTEALGIDPN ELYTEALGIDPNNIKTNAKLYCNRGTVNSK K L A I K T 2 0 2 1 0 0 2 1 0 2 3 1 0 0 1 0 1 0 2 0 0 0 18 0 2036.0466 Q99615 Q99615 274 291 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 4.7996E-05 192.4 By MS/MS 6 0 1 1 316600 316600 0 7826 2253 8085 19362 15575 15575 1 2176.4 0 LAYIAHPK VKPKIPKGVSRKLDRLAYIAHPKLGKRARA VSRKLDRLAYIAHPKLGKRARARIAKGLRL R L A P K L 2 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 8 0 911.52289 P47914 P47914 96 103 RPL29 60S ribosomal protein L29 yes yes 3 0.032724 110.34 By MS/MS 8.5 0.5 1 1 2 1321400 1321400 0 7827 929 8086 19363;19364 15576 15576 1 24548 0 LAYINPDLALEEK KKCQQAEKILKEQERLAYINPDLALEEKNK ERLAYINPDLALEEKNKGNECFQKGDYPQA R L A E K N 2 0 1 1 0 0 2 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 13 0 1487.7872 P31948 P31948 352 364 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 2.9522E-05 182.41 By MS/MS 6 0.816 1 1 1 3 28034000 28034000 0 7828 795 8087 19365;19366;19367 15577;15578;15579 15577 3 261520 0 LAYQTDNKK DEPEEAELILHDALRLAYQTDNKKAITYTY LHDALRLAYQTDNKKAITYTYDLMANLAFI R L A K K A 1 0 1 1 0 1 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 0 9 1 1079.5611 Q6DKK2 Q6DKK2 125 133 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 0.0084087 115.49 By MS/MS 7.5 0.5 1 1 2 793230 793230 0 7829 1676 8088 19368;19369 15580 15580 1 10665 0 LAYVAPTIPR SLDNKEKEKDSKGTRLAYVAPTIPRRLAST SKGTRLAYVAPTIPRRLASTSDIEEKENRD R L A P R R 2 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 1 0 1 1 0 0 10 0 1099.639 O14974 O14974 494 503 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 2 0.0091069 99.442 By MS/MS 3 0 1 1 368990 368990 0 7830 151 8089 19370 15581 15581 1 6751.5 0 LAYYYQR FVGLQGSGKTTTCSKLAYYYQRKGWKTCLI GKTTTCSKLAYYYQRKGWKTCLICADTFRA K L A Q R K 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 7 0 975.48142 P61011 P61011 121 127 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.03591 100.27 By MS/MS 6 0 1 1 5436400 5436400 0 7831 1104 8090 19371 15582 15582 1 37371 0 LCAGASEDIR CVQGKEERNYHIFYRLCAGASEDIREKLHL HIFYRLCAGASEDIREKLHLSSPDNFRYLN R L C I R E 2 1 0 1 1 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1090.5077 Q9UM54 Q9UM54 251 260 MYO6 Unconventional myosin-VI yes yes 2 0.0045125 106.68 By MS/MS 3 0 1 1 302620 302620 0 7832 2781 8091 19372 15583 15583 1 5537.1 0 LCAGASEDIREK CVQGKEERNYHIFYRLCAGASEDIREKLHL FYRLCAGASEDIREKLHLSSPDNFRYLNRG R L C E K L 2 1 0 1 1 0 2 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 12 1 1347.6453 Q9UM54 Q9UM54 251 262 MYO6 Unconventional myosin-VI yes yes 3 0.0097162 87.713 By MS/MS 3 0 1 1 704200 704200 0 7833 2781 8092 19373 15584 15584 1 12885 0 LCAGTGENK CVPGADKGQFPNLCRLCAGTGENKCAFSSQ FPNLCRLCAGTGENKCAFSSQEPYFSYSGA R L C N K C 1 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 948.43348 P02788 P02788 191 199 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.03523 95.815 By MS/MS 1 0 1 1 137080 0 137080 7834 459 8093 19374 15585 15585 1 0 137080 LCCTCEAAYR EVKSFLIQLEAFLSRLCCTCEAAYRVLHWE AFLSRLCCTCEAAYRVLHWENPVVSSQFYG R L C Y R V 2 1 0 0 3 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1302.5155 Q5T4F4 Q5T4F4 163 172 ZFYVE27 Protrudin yes yes 2 0.0009683 124.23 By MS/MS 6 0 1 1 805350 805350 0 7835 1632 8094 19375 15586 15586 1 5536.2 0 LCDEQLSSQSHYDFGLR RTAEVLANKIVPFFKLCDEQLSSQSHYDFG DEQLSSQSHYDFGLRALKSVLVSAGNVKRE K L C L R A 0 1 0 2 1 2 1 1 1 0 3 0 0 1 0 3 0 0 1 0 0 0 17 0 2053.9164 Q14204 Q14204 2075 2091 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0058269 93.424 By MS/MS 1.5 0.5 1 1 2 435520 435520 0 7836 1433 8095 19376;19377 15587 15587 1 127770 0 LCDFGFAR ENVLLASAEPFPQVKLCDFGFARIIGEKSF EPFPQVKLCDFGFARIIGEKSFRRSVVGTP K L C A R I 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 984.44874 Q9BZL6;Q00532;Q92772;Q8IVW4;O76039;Q9NRP7;O94806;Q15139 O94806 718 725 PRKD2;CDKL1;CDKL2;CDKL3;CDKL5;STK36;PRKD3;PRKD1 Serine/threonine-protein kinase D2;Cyclin-dependent kinase-like 1;Cyclin-dependent kinase-like 2;Cyclin-dependent kinase-like 3;Cyclin-dependent kinase-like 5;Serine/threonine-protein kinase 36;Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 no no 2 0.0068542 116.9 By MS/MS 4 0.816 1 1 1 3 2008400 2008400 0 7837 2383;367 8096 19378;19379;19380 15588 15588 1 164330 0 LCEAICPAQAITIEAEPR LRRYPSGEERCIACKLCEAICPAQAITIEA AICPAQAITIEAEPRADGSRRTTRYDIDMT K L C P R A 4 1 0 0 2 1 3 0 0 3 1 0 0 0 2 0 1 0 0 0 0 0 18 0 2040.9972 O00217 O00217 116 133 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 2 0.00029287 166.3 By MS/MS 9 0 1 1 1545600 1545600 0 7838 92 8097 19381 15589 15589 1 30417 0 LCEFNCNIR DTGYIWMGTASLKEKLCEFNCNIRAPPKQM ASLKEKLCEFNCNIRAPPKQMVWCSRPRSK K L C I R A 0 1 2 0 2 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1224.538 Q9H269 Q9H269 254 262 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 0.00017281 156.75 By MS/MS 4 0 1 1 1447700 1447700 0 7839 2427 8098 19382 15590 15590 1 136240 0 LCENYIK FDDLKCDAERENFHRLCENYIKSWFEGQGL AERENFHRLCENYIKSWFEGQGLAGKLRAI R L C I K S 0 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 7 0 938.45315 Q9H3U1 Q9H3U1 394 400 UNC45A Protein unc-45 homolog A yes yes 2 0.0067708 148.33 By MS/MS 5 0.816 1 1 1 3 1957000 1957000 0 7840 2442 8099 19383;19384;19385 15591 15591 1 117950 0 LCESNRVDAK SRLRKAVKHAEELERLCESNRVDAKTKLEA EELERLCESNRVDAKTKLEAQAYTAYLSGM R L C A K T 1 1 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 1 1190.5714 Q9UHB9 Q9UHB9 172 181 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00028359 156.83 By MS/MS 5 0 1 1 3040800 3040800 0 7841 2728 8100 19386 15592 15592 1 30498 0 LCGDTSLNNMQR YLRPHLEATLQLSLKLCGDTSLNNMQRQLA SLKLCGDTSLNNMQRQLALEVIVTLSETAA K L C Q R Q 0 1 2 1 1 1 0 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 12 0 1407.6235 O00410 O00410 265 276 IPO5 Importin-5 yes yes 2 5.0825E-05 166.66 By MS/MS 4 0 2 2 1076300 1076300 0 7842 103 8101;8102 19387;19388 15593;15594 15593 65 2 101290 0 LCKEVPNYK KLNNLVLFDKATYDKLCKEVPNYKLITPAV KATYDKLCKEVPNYKLITPAVVSERLKIRG K L C Y K L 0 0 1 0 1 0 1 0 0 0 1 2 0 0 1 0 0 0 1 1 0 0 9 1 1149.5852 P62851 P62851 58 66 RPS25 40S ribosomal protein S25 yes yes 3 0.045458 83.647 By MS/MS 9.5 0.5 1 1 2 623210 623210 0 7843 1176 8103 19389;19390 15595 15595 1 21371 0 LCLELLNVGVESK VRGILNKLTPEKFDKLCLELLNVGVESKLI DKLCLELLNVGVESKLILKGVILLIVDKAL K L C S K L 0 0 1 0 1 0 2 1 0 0 4 1 0 0 0 1 0 0 0 2 0 0 13 0 1472.7909 P78344 P78344 96 108 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 8.4981E-08 215.04 By MS/MS 4 0 1 1 330160 330160 0 7844 1219 8104 19391 15596 15596 1 31071 0 LCLQSIAFISR EHIIMKPACPLFVRRLCLQSIAFISRLAPT FVRRLCLQSIAFISRLAPTVP_________ R L C S R L 1 1 0 0 1 1 0 0 0 2 2 0 0 1 0 2 0 0 0 0 0 0 11 0 1306.7067 P57088 P57088 231 241 TMEM33 Transmembrane protein 33 yes yes 2 3.6296E-09 208.15 By MS/MS 9 0 1 1 372730 372730 0 7845 1078 8105 19392 15597 15597 1 7335.3 0 LCNEEQELLR AQEEKELLESLPLSKLCNEEQELLRFLFEN LPLSKLCNEEQELLRFLFENKLKKYNKPSE K L C L R F 0 1 1 0 1 1 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1302.6238 Q13042 Q13042 193 202 CDC16 Cell division cycle protein 16 homolog yes yes 2 0.0001459 150.81 By MS/MS 5 0 1 1 4887700 4887700 0 7846 1347 8106 19393 15598 15598 1 49021 0 LCNIPLASR YLQWLQDSDYNPNCRLCNIPLASRETTRLV YNPNCRLCNIPLASRETTRLVCYDLFHWAC R L C S R E 1 1 1 0 1 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 0 1042.5593 O95159 O95159 55 63 ZFPL1 Zinc finger protein-like 1 yes yes 2 0.011368 98.044 By MS/MS 7 0 1 1 2097400 2097400 0 7847 387 8107 19394 15599 15599 1 32926 0 LCNLEEGSPGSGTYTR ______________________________ CNLEEGSPGSGTYTRHGYIFSSLAGCLMKS R L C T R H 0 1 1 0 1 0 2 3 0 0 2 0 0 0 1 2 2 0 1 0 0 0 16 0 1739.7785 Q9Y3B2 Q9Y3B2 14 29 EXOSC1 Exosome complex component CSL4 yes yes 2 1.3305E-16 256.13 By MS/MS 9 0 1 1 1200000 1200000 0 7848 2863 8108 19395 15600 15600 1 23616 0 LCNSLEESIR YMISDTLELLRPKIKLCNSLEESIRQVQDL RPKIKLCNSLEESIRQVQDLEREFLIKLGL K L C I R Q 0 1 1 0 1 0 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1219.5867 Q9HAU5 Q9HAU5 989 998 UPF2 Regulator of nonsense transcripts 2 yes yes 2 1.1868E-05 173.24 By MS/MS 3 0 1 1 390280 390280 0 7849 2494 8109 19396 15601 15601 1 7141.1 0 LCNWVSR SSRIRFMLQDVIDLRLCNWVSRRADQGPKT LQDVIDLRLCNWVSRRADQGPKTIEQIHKE R L C S R R 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 7 0 933.44907 O43432 O43432 981 987 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.044091 75.213 By MS/MS 2 0 1 1 398980 398980 0 7850 210 8110 19397 15602 15602 1 134950 0 LCPNSTGAEIR SMSVERDIRFELLARLCPNSTGAEIRSVCT LLARLCPNSTGAEIRSVCTEAGMFAIRARR R L C I R S 1 1 1 0 1 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1216.587 P35998 P35998 376 386 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.039281 75.566 By MS/MS By matching 6.75 0.829 2 1 1 3 1 8759000 8737400 21653 7851 831 8111 19398;19399;19400;19401 15603 15603 1 91438 22189 LCQDLPCFSR PSKSYVKLRDFVLVKLCQDLPCFSREKLMQ FVLVKLCQDLPCFSREKLMQGFNEDMAIEA K L C S R E 0 1 0 1 2 1 0 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1294.5798 O14929 O14929 293 302 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.0026665 110.84 By MS/MS 7 0 1 1 1216400 1216400 0 7852 146 8112 19402 15604 15604 1 19095 0 LCTFILK CKACGYRGMLDTHHKLCTFILKNPPENSDS GMLDTHHKLCTFILKNPPENSDSGTGKKEK K L C L K N 0 0 0 0 1 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 7 0 893.50446 P55010 P55010 137 143 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.016436 118.69 By MS/MS 6 0 1 1 2441900 2441900 0 7853 1050 8113 19403 15605 15605 1 16786 0 LCTSATESEVAR KIDDMMFVLQGQWMRLCTSATESEVARGKN WMRLCTSATESEVARGKNILRNALVSHLDG R L C A R G 2 1 0 0 1 0 2 0 0 0 1 0 0 0 0 2 2 0 0 1 0 0 12 0 1322.6136 P31930 P31930 379 390 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 2.2853E-12 227.27 By MS/MS By matching 7.25 1.64 2 1 1 3 1 4581600 4552000 29630 7854 788 8114 19404;19405;19406;19407 15606;15607;15608 15607 3 43077 30363 LCTSVTESEVAR TVADMLHVVQKEWMRLCTSVTESEVARARN WMRLCTSVTESEVARARNLLKTNMLLQLDG R L C A R A 1 1 0 0 1 0 2 0 0 0 1 0 0 0 0 2 2 0 0 2 0 0 12 0 1350.6449 O75439 O75439 388 399 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.0040292 106.4 By MS/MS By matching 7 0 2 1 1 1891000 1865200 25756 7855 329 8115 19408;19409 15609 15609 1 29281 46386 LCTVNSVEEK RAHRIGQQNEVRVLRLCTVNSVEEKILAAA VRVLRLCTVNSVEEKILAAAKYKLNVDQKV R L C E K I 0 0 1 0 1 0 2 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 10 0 1177.5649 P51532;P51531 P51532 1204 1213 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 3.4E-05 158.76 By MS/MS By matching 1.5 0.5 1 1 1 1 831840 817620 14220 7856 995 8116 19410;19411 15610 15610 1 276550 14220 LCVGIVASER VPKQTLSAAAVFNDRLCVGIVASERAGVGK VFNDRLCVGIVASERAGVGKSLYVKRLHDK R L C E R A 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1102.5805 Q63HN8 Q63HN8 1984 1993 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.037713 78.264 By MS/MS 1 0 1 1 128620 128620 0 7857 1664 8117 19412 15611 15611 1 30992 0 LCYVGYNIEQEQK NHSADFETVRMIKEKLCYVGYNIEQEQKLA EKLCYVGYNIEQEQKLALETTVLVESYTLP K L C Q K L 0 0 1 0 1 2 2 1 0 1 1 1 0 0 0 0 0 0 2 1 0 0 13 0 1642.7661 P61160 P61160 220 232 ACTR2 Actin-related protein 2 yes yes 2 2.8687E-24 313.3 By MS/MS 7 0 1 1 2290000 2290000 0 7858 1112 8118 19413 15612 15612 1 35949 0 LCYYIGATDDAATK ELIKFCREARGKENRLCYYIGATDDAATKI RLCYYIGATDDAATKIINEVSKPLAHHIPV R L C T K I 3 0 0 2 1 0 0 1 0 1 1 1 0 0 0 0 2 0 2 0 0 0 14 0 1560.713 P55145 P55145 74 87 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 2 1.1484E-12 247.96 By MS/MS 9.5 0.5 1 1 2 632150 632150 0 7859 1056 8119 19414;19415 15613 15613 1 30282 0 LDAEPRPPPTQEAA HKVNLQMVYDSPLCRLDAEPRPPPTQEAA_ RLDAEPRPPPTQEAA_______________ R L D A A - 3 1 0 1 0 1 2 0 0 0 1 0 0 0 4 0 1 0 0 0 0 0 14 1 1490.7365 Q9Y285 Q9Y285 495 508 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 0.015623 109.16 By MS/MS 6 0 1 1 2671500 2671500 0 7860 2819 8120 19416 15614 15614 1 18365 0 LDAEVPTR SVENCMCVLHNLSYRLDAEVPTRYRQLEYN LHNLSYRLDAEVPTRYRQLEYNARNAYTEK R L D T R Y 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 8 0 899.47125 Q13835 Q13835 486 493 PKP1 Plakophilin-1 yes yes 2 0.050215 93.429 By MS/MS 10 0 1 1 63504 0 63504 7861 1410 8121 19417 15615 15615 1 0 81303 LDALEIACEVR GLFKTDRVLGTAQLKLDALEIACEVREILE AQLKLDALEIACEVREILEVLDGRRPTGGR K L D V R E 2 1 0 1 1 0 2 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1287.6493 Q6P1N0 Q6P1N0 758 768 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 6.2718E-05 155.15 By MS/MS 3.5 0.5 1 1 2 242940 242940 0 7862 1701 8122 19418;19419 15616 15616 1 14039 0 LDALLAELR AFEFVLKADDDSFARLDALLAELRAREPAR DDSFARLDALLAELRAREPARRRRLYWGFF R L D L R A 2 1 0 1 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5917 Q96L58 Q96L58 163 171 B3GALT6 Beta-1,3-galactosyltransferase 6 yes yes 2 0.00075174 138.98 By MS/MS By matching 7 0.816 1 1 1 2 1 647190 606080 41116 7863 2193 8123 19420;19421;19422 15617;15618 15618 2 9160.7 42133 LDCAQLK YQYQVVLVEPKTAWRLDCAQLKEKNQWQLS VEPKTAWRLDCAQLKEKNQWQLSADDLKKL R L D L K E 1 0 0 1 1 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 846.42694 P09543 P09543 156 162 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.015743 120.49 By MS/MS 7 0 1 1 871660 871660 0 7864 537 8124 19423 15619 15619 1 13684 0 LDCLIEVYR GISQVVPVFQSAKPRLDCLIEVYRSCQEIL QSAKPRLDCLIEVYRSCQEILAHQKATSTS R L D Y R S 0 1 0 1 1 0 1 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1179.5958 Q14442 Q14442 164 172 PIGH Phosphatidylinositol N-acetylglucosaminyltransferase subunit H yes yes 2 0.00034583 151.44 By MS/MS 9 0 1 1 600660 600660 0 7865 1439 8125 19424 15620 15620 1 11821 0 LDDCGLTEAR WAELLPLLQQCQVVRLDDCGLTEARCKDIS CQVVRLDDCGLTEARCKDISSALRVNPALA R L D A R C 1 1 0 2 1 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1148.5132 P13489 P13489 35 44 RNH1 Ribonuclease inhibitor yes yes 2 0.00026107 142.98 By MS/MS 7.5 0.5 1 1 2 5404200 5404200 0 7866 601 8126 19425;19426 15621 15621 1 84264 0 LDDDPPPSTLLK QAARGYVVRKPAQSRLDDDPPPSTLLKDYQ QSRLDDDPPPSTLLKDYQNVPGIEKVDDVV R L D L K D 0 0 0 3 0 0 0 0 0 0 3 1 0 0 3 1 1 0 0 0 0 0 12 0 1309.6765 P82914 P82914 63 74 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.00040697 136.99 By MS/MS By matching 8.33 0.471 2 1 2 1 5115800 5069500 46368 7867 1235 8127 19427;19428;19429 15622;15623 15622 2 70382 62571 LDDIFEPVLIPEPK NGTVRCEMPELVQHKLDDIFEPVLIPEPKI KLDDIFEPVLIPEPKIRAVSPHFDDMHSNT K L D P K I 0 0 0 2 0 0 2 0 0 2 2 1 0 1 3 0 0 0 0 1 0 0 14 0 1623.876 Q14008 Q14008 1510 1523 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0057432 101.89 By MS/MS 2 0 1 1 67781 67781 0 7868 1417 8128 19430 15624 15624 1 22926 0 LDDLFLK SAKALYEHLTAKNTKLDDLFLKRYASLLKY HLTAKNTKLDDLFLKRYASLLKYAGEPVPF K L D L K R 0 0 0 2 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 7 0 862.48002 P42704 P42704 1351 1357 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.015433 121.29 By MS/MS By matching 3.33 0.471 2 1 2 1 993000 950970 42027 7869 886 8129 19431;19432;19433 15625 15625 1 24564 5349.4 LDDLFLKR SAKALYEHLTAKNTKLDDLFLKRYASLLKY LTAKNTKLDDLFLKRYASLLKYAGEPVPFI K L D K R Y 0 1 0 2 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 8 1 1018.5811 P42704 P42704 1351 1358 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.016429 107.66 By MS/MS 4 0.816 1 1 1 3 3495900 3495900 0 7870 886 8130 19434;19435;19436 15626;15627 15626 2 110700 0 LDDLVNWAR VAPKPSSRGEYVVAKLDDLVNWARRSSLWP EYVVAKLDDLVNWARRSSLWPMTFGLACCA K L D A R R 1 1 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 9 0 1100.5615 O75251 O75251 67 75 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 7.6897E-05 166.52 By MS/MS 9.5 0.5 1 1 2 1207600 1207600 0 7871 307 8131 19437;19438 15628;15629 15628 2 28653 0 LDDNEALIEK MGDIEGLIDKVNELKLDDNEALIEKLKHGQ VNELKLDDNEALIEKLKHGQFTLRDMYEQF K L D E K L 1 0 1 2 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1158.5768 P61011 P61011 312 321 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.0004931 144.65 By MS/MS 6 0 1 1 1142000 1142000 0 7872 1104 8132 19439 15630 15630 1 7850.2 0 LDDQIFLNR VRRQAQQVIQKGITRLDDQIFLNRNPGVPS QKGITRLDDQIFLNRNPGVPSVVKFHPFTP R L D N R N 0 1 1 2 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1132.5877 Q8N122 Q8N122 1013 1021 RPTOR Regulatory-associated protein of mTOR yes yes 2 9.1386E-07 181.41 By MS/MS 3 0 1 1 268820 268820 0 7873 1899 8133 19440 15631 15631 1 4918.6 0 LDDSLLYLR NPRVQEIQVVKLEKRLDDSLLYLRDALPEY VKLEKRLDDSLLYLRDALPEYSTFDVNMKP R L D L R D 0 1 0 2 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 9 0 1106.5972 P49406 P49406 183 191 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 1.8552E-15 230.11 By MS/MS 8.5 0.5 1 1 2 3142000 3142000 0 7874 948 8134 19441;19442 15632;15633 15632 2 40352 0 LDDTYIK RKLDDAIEDCTNAVKLDDTYIKAYLRRAQC EDCTNAVKLDDTYIKAYLRRAQCYMDTEQY K L D I K A 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 7 0 866.43855 Q99615 Q99615 323 329 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.048731 90.777 By MS/MS 6 0 1 1 1484500 1484500 0 7875 2253 8135 19443 15634 15634 1 10204 0 LDDTYSFQVINK NIMSIFTFMGANVMRLDDTYSFQVINKTVK VMRLDDTYSFQVINKTVKMVIPALIQSDSG R L D N K T 0 0 1 2 0 1 0 0 0 1 1 1 0 1 0 1 1 0 1 1 0 0 12 0 1441.7089 Q9H583 Q9H583 1337 1348 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 8.8946E-18 251.64 By MS/MS 2.5 1.12 1 1 1 1 4 965210 965210 0 7876 2451 8136 19444;19445;19446;19447 15635 15635 1 228700 0 LDECEEAFQGTK NSHDGLDGPTYKKRRLDECEEAFQGTKVFV KRRLDECEEAFQGTKVFVMPNGMLKSNQQL R L D T K V 1 0 0 1 1 1 3 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 12 0 1425.6082 P61289 P61289 89 100 PSME3 Proteasome activator complex subunit 3 yes yes 2 6.3691E-18 257.09 By MS/MS 8.5 0.5 1 1 2 1519600 1519600 0 7877 1120 8137 19448;19449 15636 15636 1 19826 0 LDEDLAAYCR ITPGARGAFSEEYKRLDEDLAAYCRRRDIR EEYKRLDEDLAAYCRRRDIRILVLDDTNHE R L D C R R 2 1 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1224.5445 P09543 P09543 103 112 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 1.0481E-07 191.85 By MS/MS 7 0 1 1 1703900 1703900 0 7878 537 8138 19450 15637 15637 1 26748 0 LDEELEDAEK LLNKMKKANEDELKRLDEELEDAEKNLGES DELKRLDEELEDAEKNLGESEIRDAMMAKA R L D E K N 1 0 0 2 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1189.535 Q15008 Q15008 84 93 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0014511 122.28 By MS/MS 7 0 1 1 292790 292790 0 7879 1471 8139 19451 15638 15638 1 4596.3 0 LDEFGEQLSK EMVATEQERTPLQQKLDEFGEQLSKVISLI PLQQKLDEFGEQLSKVISLICIAVWIINIG K L D S K V 0 0 0 1 0 1 2 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5663 P16615;O14983 P16615 253 262 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 9.7629E-08 192.64 By MS/MS 3 1.41 1 1 1 1 1 5 9673700 9673700 0 7880 635 8140 19452;19453;19454;19455;19456 15639;15640;15641;15642;15643 15641 5 1530600 0 LDELEELLTNNR LMDDIYQFSKNFSLRLDELEELLTNNRIWR SLRLDELEELLTNNRIWRNRTIDIGVVTAE R L D N R I 0 1 2 1 0 0 3 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 12 0 1457.7362 O75306 O75306 255 266 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 3.4234E-09 256.24 By MS/MS 7 0.816 1 1 1 3 3341900 3341900 0 7881 308 8141 19457;19458;19459 15644;15645 15644 2 48695 0 LDFIESDSPCSSEALSK LPEGEDVHNFLLEQKLDFIESDSPCSSEAL FIESDSPCSSEALSKKELSAEELYKRLEKL K L D S K K 1 0 0 2 1 0 2 0 0 1 2 1 0 1 1 5 0 0 0 0 0 0 17 0 1883.8459 O43432 O43432 1402 1418 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 2.1151E-07 220.53 By MS/MS 2 0 1 1 313460 313460 0 7882 210 8142 19460 15646 15646 1 106030 0 LDFNPDRYLQDNPASGEK SPTVNQRLKDSWVERLDFNPDRYLQDNPAS NPDRYLQDNPASGEKFAYVPFGAGRHRCIG R L D E K F 1 1 2 3 0 1 1 1 0 0 2 1 0 1 2 1 0 0 1 0 0 0 18 1 2077.9705 Q16850 Q16850 419 436 CYP51A1 Lanosterol 14-alpha demethylase yes yes 3 0.00018838 128.99 By MS/MS 6 0 1 1 2576500 2576500 0 7883 1561 8143 19461 15647 15647 1 17712 0 LDFSCNR LSTLPEELGDLPLVRLDFSCNRVSRIPVSF LGDLPLVRLDFSCNRVSRIPVSFCRLRHLQ R L D N R V 0 1 1 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 7 0 910.3967 O75427 O75427 209 215 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.052752 89.369 By MS/MS 5 0 1 1 1917900 1917900 0 7884 326 8144 19462 15648 15648 1 19236 0 LDFSITKDPAAEAR AAFYILFFTVIIYVRLDFSITKDPAAEARM RLDFSITKDPAAEARMKVACITEQVLTLVN R L D A R M 3 1 0 2 0 0 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 14 1 1532.7835 P04843 P04843 459 472 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.00025152 163.51 By MS/MS 5 0 2 2 11963000 11963000 0 7885 478 8145 19463;19464 15649;15650 15649 2 119980 0 LDGGLDLLLR AVGREVAQGLCDAIRLDGGLDLLLRLLQAP CDAIRLDGGLDLLLRLLQAPELETRVQAAR R L D L R L 0 1 0 2 0 0 0 2 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1083.6288 Q6SZW1 Q6SZW1 122 131 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 2.2788E-06 179.51 By MS/MS 5 0 1 1 280660 280660 0 7886 1726 8146 19465 15651 15651 1 2814.9 0 LDGLVETPTGYIESLPR QMMQNPQILAALQERLDGLVETPTGYIESL GLVETPTGYIESLPRVVKRRVNALKNLQVK R L D P R V 0 1 0 1 0 0 2 2 0 1 3 0 0 0 2 1 2 0 1 1 0 0 17 0 1858.9676 P55209 P55209 56 72 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 7.1708E-11 230.59 By MS/MS 6 0 1 1 10929000 10929000 0 7887 1058 8147 19466 15652 15652 1 75126 0 LDGNAIVDFVR SVVVAVDRIFTGSTRLDGNAIVDFVRWLCA GSTRLDGNAIVDFVRWLCAVSMDELLSTTH R L D V R W 1 1 1 2 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 11 0 1217.6404 Q9Y6D6;Q9Y6D5 Q9Y6D6 1135 1145 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.00027578 136.49 By MS/MS 2 0 1 1 661540 661540 0 7888 2941;2940 8148 19467 15653 15653 1 223760 0 LDGNLLTQPGQAR LWLSVTCLIPFDFSRLDGNLLTQPGQARMS SRLDGNLLTQPGQARMSIMDRILQIAESYL R L D A R M 1 1 1 1 0 2 0 2 0 0 3 0 0 0 1 0 1 0 0 0 0 0 13 0 1381.7314 Q9BTW9 Q9BTW9 170 182 TBCD Tubulin-specific chaperone D yes yes 2 2.6673E-05 184.44 By MS/MS 4 0.816 1 1 1 3 2748900 2748900 0 7889 2319 8149 19468;19469;19470 15654 15654 1 102280 0 LDHKFDLMYAK CMLSNTTAVAEAWARLDHKFDLMYAKRAFV AWARLDHKFDLMYAKRAFVHWYVGEGMEEG R L D A K R 1 0 0 2 0 0 0 0 1 0 2 2 1 1 0 0 0 0 1 0 0 0 11 1 1379.6908 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;A6NHL2 Q9BQE3 391 401 TUBA1B;TUBA4A;TUBA1A;TUBA8;TUBA1C;TUBAL3 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3 no no 2;3;4 6.6439E-06 174.98 By MS/MS 7.12 1.57 2 6 3 2 2 2 17 180380000 180380000 0 7890 1210;1751;2290;1211;22 8150;8151 19471;19472;19473;19474;19475;19476;19477;19478;19479;19480;19481;19482;19483;19484;19485;19486;19487 15655;15656;15657;15658;15659;15660;15661;15662;15663 15659 7 9 1382000 0 LDHKFDLMYAKR CMLSNTTAVAEAWARLDHKFDLMYAKRAFV WARLDHKFDLMYAKRAFVHWYVGEGMEEGE R L D K R A 1 1 0 2 0 0 0 0 1 0 2 2 1 1 0 0 0 0 1 0 0 0 12 2 1535.7919 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;A6NHL2 Q9BQE3 391 402 TUBA1B;TUBA4A;TUBA1A;TUBA8;TUBA1C;TUBAL3 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3 no no 3;4 6.9294E-13 240.85 By MS/MS 6 0 3 3 29343000 29343000 0 7891 1210;1751;2290;1211;22 8152;8153 19488;19489;19490 15664;15665;15666 15666 7 3 201710 0 LDHYAIIK RQPKYPRKSAPRRNKLDHYAIIKFPLTTES SAPRRNKLDHYAIIKFPLTTESAMKKIEDN K L D I K F 1 0 0 1 0 0 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 0 8 0 971.54402 P62750 P62750 71 78 RPL23A 60S ribosomal protein L23a yes yes 2 0.015404 104.75 By MS/MS 9 0 1 1 512460 512460 0 7892 1168 8154 19491 15667 15667 1 10085 0 LDIDPETITWQR DPTTLTDEEINRFARLDIDPETITWQRVLD FARLDIDPETITWQRVLDTNDRFLRKITIG R L D Q R V 0 1 0 2 0 1 1 0 0 2 1 0 0 0 1 0 2 1 0 0 0 0 12 0 1485.7464 P11586 P11586 521 532 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 5.0916E-06 187.42 By MS/MS 4 0 1 1 2546800 2546800 0 7893 582 8155 19492 15668 15668 1 239670 0 LDIDPSTITWQR DPSTLTEEEVSKFARLDIDPSTITWQRVLD FARLDIDPSTITWQRVLDTNDRFLRKITIG R L D Q R V 0 1 0 2 0 1 0 0 0 2 1 0 0 0 1 1 2 1 0 0 0 0 12 0 1443.7358 Q6UB35 Q6UB35 564 575 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00077414 118.9 By MS/MS 4 0 1 1 2527300 2527300 0 7894 1728 8156 19493 15669 15669 1 237830 0 LDIDSPPITAR LHAAMADTFLEHMCRLDIDSPPITARNTGI HMCRLDIDSPPITARNTGIICTIGPASRSV R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 P14618 P14618 33 43 PKM Pyruvate kinase PKM yes yes 2 1.4064E-05 169.41 By MS/MS By matching 7.25 1.64 2 1 1 3 1 3633100 3597300 35856 7895 614 8157 19494;19495;19496;19497 15670;15671 15670 2 35482 36742 LDIKLDSEDKDK IMNFKKEETAKLIEKLDIKLDSEDKDKEGK IEKLDIKLDSEDKDKEGKPLLKAVMRRWLP K L D D K E 0 0 0 4 0 0 1 0 0 1 2 3 0 0 0 1 0 0 0 0 0 0 12 2 1417.73 P13639 P13639 319 330 EEF2 Elongation factor 2 yes yes 2 0.0028368 139.15 By MS/MS 4 0 1 1 668010 668010 0 7896 602 8158 19498 15672 15672 1 62865 0 LDILLGTAR HCQTQACPPLSWPQRLDILLGTARAIQFLH LSWPQRLDILLGTARAIQFLHQDSPSLIHG R L D A R A 1 1 0 1 0 0 0 1 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 970.58113 P51617 P51617 316 324 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 0.0093162 101.65 By MS/MS 5 0 1 1 1002800 1002800 0 7897 1001 8159 19499 15673 15673 1 10058 0 LDKAQIHDLVLVGGSTR RSTLEPVEKALRDAKLDKAQIHDLVLVGGS KAQIHDLVLVGGSTRIPKVQKLLQDFFNGR K L D T R I 1 1 0 2 0 1 0 2 1 1 3 1 0 0 0 1 1 0 0 2 0 0 17 1 1821.0108 P0DMV9;P0DMV8 P0DMV9 326 342 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 3.235E-07 213 By MS/MS 5.33 0.471 2 1 3 11982000 11982000 0 7898 550 8160 19500;19501;19502 15674;15675 15674 2 114100 0 LDKMIDLIIPR VQLVNTREEVEDLCRLDKMIDLIIPRGSSQ DLCRLDKMIDLIIPRGSSQLVRDIQKAAKG R L D P R G 0 1 0 2 0 0 0 0 0 3 2 1 1 0 1 0 0 0 0 0 0 0 11 1 1325.7741 P54886 P54886 548 558 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.00091753 126.03 By MS/MS 5 0 1 1 638330 638330 0 7899 1048 8161 19503 15676 15676 581 0 6402.1 0 LDKQHTFR PAHAVDAVKNADGYKLDKQHTFRVNLFTDF KNADGYKLDKQHTFRVNLFTDFDKYMTISD K L D F R V 0 1 0 1 0 1 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 8 1 1043.5512 P55884 P55884 255 262 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.012569 123.35 By MS/MS 4 0.707 1 2 1 4 5544900 5544900 0 7900 1065 8162 19504;19505;19506;19507 15677;15678;15679 15678 3 395160 0 LDKSQIHDIVLVGGSTR RGTLDPVEKALRDAKLDKSQIHDIVLVGGS KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK K L D T R I 0 1 0 2 0 1 0 2 1 2 2 1 0 0 0 2 1 0 0 2 0 0 17 1 1837.0058 P11142 P11142 326 342 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 4.4448E-10 249.58 By MS/MS 5.86 0.833 3 2 2 7 38398000 38398000 0 7901 572 8163 19508;19509;19510;19511;19512;19513;19514 15680;15681;15682;15683 15681 4 378860 0 LDLAGRDLTDYLMK VPIYEGYALPHAILRLDLAGRDLTDYLMKI RLDLAGRDLTDYLMKILTERGYSFTTTAER R L D M K I 1 1 0 3 0 0 0 1 0 0 4 1 1 0 0 0 1 0 1 0 0 0 14 1 1622.8338 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P63261 178 191 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 3 0.00038257 154.23 By MS/MS 7 0.816 1 1 1 3 5446400 5446400 0 7902 1095;1203;1594 8164 19515;19516;19517 15684 15684 615 1 81865 0 LDLDLTADSQPPVFK VSGLMRKVPRVSLERLDLDLTADSQPPVFK LDLDLTADSQPPVFKVFPGSTTEDYNLIVI R L D F K V 1 0 0 3 0 1 0 0 0 0 3 1 0 1 2 1 1 0 0 1 0 0 15 0 1657.8563 Q13263 Q13263 493 507 TRIM28 Transcription intermediary factor 1-beta yes yes 2 7.8307E-11 228.93 By MS/MS 4 0 1 1 1544900 1544900 0 7903 1367 8165 19518 15685 15685 1 145380 0 LDLGEGDLNK LQLAVLQGLGPLCERLDLGEGDLNKVADAC PLCERLDLGEGDLNKVADACLIYLSVKQPV R L D N K V 0 0 1 2 0 0 1 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1072.5401 O43156 O43156 997 1006 TTI1 TELO2-interacting protein 1 homolog yes yes 2 0.049585 76.282 By MS/MS 4 0 1 1 733850 733850 0 7904 192 8166 19519 15686 15686 1 69061 0 LDLLEDR AEGPYKIILTARPFRLDLLEDRSLLLSVNA ILTARPFRLDLLEDRSLLLSVNARGLLEFE R L D D R S 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 872.46035 Q14697 Q14697 158 164 GANAB Neutral alpha-glucosidase AB yes yes 2 0.039197 97.798 By MS/MS 4 0 1 1 1979300 1979300 0 7905 1454 8167 19520 15687 15687 1 186260 0 LDLLLEK KQQEALEEQAALEPKLDLLLEKTKELQKLI EQAALEPKLDLLLEKTKELQKLIEADISKR K L D E K T 0 0 0 1 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 7 0 842.51132 Q96JB5 Q96JB5 472 478 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.017122 116.9 By MS/MS 5.5 0.5 1 1 2 4657200 4657200 0 7906 2177 8168 19521;19522 15688 15688 1 44936 0 LDLRDDKDTIEK RHHCPNTPIILVGTKLDLRDDKDTIEKLKE GTKLDLRDDKDTIEKLKEKKLTPITYPQGL K L D E K L 0 1 0 4 0 0 1 0 0 1 2 2 0 0 0 0 1 0 0 0 0 0 12 2 1459.7518 P63000;P15153 P63000 117 128 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 yes no 3 0.015388 86.288 By MS/MS 9 0 1 1 2472000 2472000 0 7907 1192 8169 19523 15689 15689 1 48649 0 LDLVGSSQPIK VACFMRLSWAAAAGRLDLVGSSQPIKESNS AAGRLDLVGSSQPIKESNSLCPAGIRNRLS R L D I K E 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 2 0 0 0 1 0 0 11 0 1155.6499 Q9UPU5 Q9UPU5 1346 1356 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.03527 77.662 By MS/MS 2 0.816 1 1 1 3 420910 420910 0 7908 2802 8170 19524;19525;19526 15690 15690 1 119180 0 LDNIFLTR GVQRLMQEHKLKVARLDNIFLTRMHWSNVG HKLKVARLDNIFLTRMHWSNVGGLSGMILT R L D T R M 0 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 8 0 990.54983 Q9BQ52 Q9BQ52 105 112 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.011178 109.44 By MS/MS 4 0 1 1 978400 978400 0 7909 2283 8171 19527 15691 15691 1 92074 0 LDNIYSSDKFYK NSLNIAGLSLDFSSKLDNIYSSDKFYKQTV SSKLDNIYSSDKFYKQTVNLQLQPYSLVTT K L D Y K Q 0 0 1 2 0 0 0 0 0 1 1 2 0 1 0 2 0 0 2 0 0 0 12 1 1491.7246 P04114 P04114 1770 1781 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 3 0.044919 64.55 By MS/MS 4.5 0.5 1 1 2 2281000 2281000 0 7910 468 8172 19528;19529 15692 15692 1 75498 0 LDNTLEEIIFK CGNQVHETNPLEMLRLDNTLEEIIFKLVPG EMLRLDNTLEEIIFKLVPGLREQELERESE R L D F K L 0 0 1 1 0 0 2 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1333.7129 Q86SE9 Q86SE9 71 81 PCGF5 Polycomb group RING finger protein 5 yes yes 2 1.019E-06 190.57 By MS/MS 8 0 1 1 55518 55518 0 7911 1808 8173 19530 15693 15693 1 700.91 0 LDPAVQQLK KVTVNPGLLVPLDVKLDPAVQQLKNQEKEE VPLDVKLDPAVQQLKNQEKEEMKALNDKFA K L D L K N 1 0 0 1 0 2 0 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 9 0 1010.576 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 72 80 KRT80 Keratin, type II cytoskeletal 80 yes no 2 0.0066339 106.36 By MS/MS 4.5 1.12 1 1 1 1 4 24045000 24045000 0 + 7912 69 8174 19531;19532;19533;19534 15694 15694 1 1695400 0 LDPETLESLGLIK LACLYLVSDTVLKERLDPETLESLGLIKQS ERLDPETLESLGLIKQSQQFNQKSVKIKTK R L D I K Q 0 0 0 1 0 0 2 1 0 1 4 1 0 0 1 1 1 0 0 0 0 0 13 0 1426.7919 Q8NI27 Q8NI27 127 139 THOC2 THO complex subunit 2 yes yes 2 0.0032177 108.9 By MS/MS 3 1 1 1 2 166200 166200 0 7913 1971 8175 19535;19536 15695;15696;15697 15696 3 38530 0 LDPGAVSDVPEAIK KNTEAIGNEVTRLVRLDPGAVSDVPEAIKF RLDPGAVSDVPEAIKFLVTWHTIDADAPEL R L D I K F 2 0 0 2 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 2 0 0 14 0 1409.7402 P42356 P42356 1578 1591 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0015824 114.72 By MS/MS 3 0.816 1 1 1 3 1796500 1796500 0 7914 880 8176 19537;19538;19539 15698 15698 1 321890 0 LDPGSEETQTLVR SPDWQVDYESYTWRKLDPGSEETQTLVREY RKLDPGSEETQTLVREYFSWEGAFQHVGKA K L D V R E 0 1 0 1 0 1 2 1 0 0 2 0 0 0 1 1 2 0 0 1 0 0 13 0 1443.7205 P26641 P26641 402 414 EEF1G Elongation factor 1-gamma yes yes 2 0.0057589 101.35 By MS/MS 7 0.816 1 1 1 3 12666000 12666000 0 7915 736 8177 19540;19541;19542 15699;15700 15700 2 113020 0 LDPHLVLDQLR FVRCIIPNHEKKAGKLDPHLVLDQLRCNGV KAGKLDPHLVLDQLRCNGVLEGIRICRQGF K L D L R C 0 1 0 2 0 1 0 0 1 0 4 0 0 0 1 0 0 0 0 1 0 0 11 0 1317.7405 P35580;P35579 P35579 683 693 MYH10;MYH9 Myosin-10;Myosin-9 no no 2;3 0.010332 88.056 By MS/MS 2 0 2 2 522000 522000 0 7916 824;825 8178 19543;19544 15701;15702 15701 2 176560 0 LDPILCDCILEK KKNDLVDADNKNLVRLDPILCDCILEKNEQ LVRLDPILCDCILEKNEQHTVMKLPWDSLL R L D E K N 0 0 0 2 2 0 1 0 0 2 3 1 0 0 1 0 0 0 0 0 0 0 12 0 1487.7364 P41214 P41214 435 446 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.00037117 139.32 By MS/MS 5 0 1 1 601610 601610 0 7917 867 8179 19545 15703 15703 1 6033.8 0 LDPSIFESLQK VIIGLKTAKGTKQLKLDPSIFESLQKERVE KQLKLDPSIFESLQKERVEAGDVIYIEANS K L D Q K E 0 0 0 1 0 1 1 0 0 1 2 1 0 1 1 2 0 0 0 0 0 0 11 0 1275.6711 Q9Y265 Q9Y265 172 182 RUVBL1 RuvB-like 1 yes yes 2 0.00012732 151.22 By MS/MS 6.5 1.12 1 1 1 1 4 17686000 17686000 0 7918 2815 8180 19546;19547;19548;19549 15704;15705;15706 15704 3 126660 0 LDPSIFESLQKER VIIGLKTAKGTKQLKLDPSIFESLQKERVE LKLDPSIFESLQKERVEAGDVIYIEANSGA K L D E R V 0 1 0 1 0 1 2 0 0 1 2 1 0 1 1 2 0 0 0 0 0 0 13 1 1560.8148 Q9Y265 Q9Y265 172 184 RUVBL1 RuvB-like 1 yes yes 2 0.033347 98.407 By MS/MS 6 0 1 1 4910500 4910500 0 7919 2815 8181 19550 15707 15707 1 33756 0 LDPSPQTIYK FPLLKLEKELLKQIKLDPSPQTIYKWIKDN LKQIKLDPSPQTIYKWIKDNISPKLHVDKG K L D Y K W 0 0 0 1 0 1 0 0 0 1 1 1 0 0 2 1 1 0 1 0 0 0 10 0 1160.6077 P78344 P78344 743 752 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.020977 80.755 By MS/MS 4 0 1 1 3805900 3805900 0 7920 1219 8182 19551 15708 15708 1 358160 0 LDQCPESPLQR HVEPRPLPSFCPPRRLDQCPESPLQRCPPP PPRRLDQCPESPLQRCPPPAPRPRLRPEPC R L D Q R C 0 1 0 1 1 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 11 0 1341.6347 Q5T749 Q5T749 388 398 KPRP Keratinocyte proline-rich protein yes yes 2 6.6623E-05 144.77 By MS/MS 5.75 2.68 1 1 1 1 4 459760 0 459760 7921 1636 8183 19552;19553;19554;19555 15709;15710;15711;15712;15713 15709 5 0 327880 LDQLIYIPLPDEK NRPDIIDPAILRPGRLDQLIYIPLPDEKSR GRLDQLIYIPLPDEKSRVAILKANLRKSPV R L D E K S 0 0 0 2 0 1 1 0 0 2 3 1 0 0 2 0 0 0 1 0 0 0 13 0 1555.8498 P55072 P55072 639 651 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.3999E-05 193.49 By MS/MS 6.33 1.89 2 1 1 1 1 6 11076000 11076000 0 7922 1054 8184 19556;19557;19558;19559;19560;19561 15714;15715;15716;15717;15718 15717 5 831320 0 LDQLIYIPLPDEKSR NRPDIIDPAILRPGRLDQLIYIPLPDEKSR LDQLIYIPLPDEKSRVAILKANLRKSPVAK R L D S R V 0 1 0 2 0 1 1 0 0 2 3 1 0 0 2 1 0 0 1 0 0 0 15 1 1798.9829 P55072 P55072 639 653 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0024865 106.52 By MS/MS 4 0 1 1 168110 168110 0 7923 1054 8185 19562 15719 15719 1 15821 0 LDQPANLLR KELQALYALQASIVKLDQPANLLRMFFDCL QASIVKLDQPANLLRMFFDCLYDEEVISED K L D L R M 1 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 9 0 1038.5822 O43432 O43432 1521 1529 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00071472 136.27 By MS/MS 3 0.816 1 1 1 3 1393300 1393300 0 7924 210 8186 19563;19564;19565 15720;15721 15720 2 345360 0 LDQQTLPLGGR VPKSEAEQKLPLGTRLDQQTLPLGGRELSQ LGTRLDQQTLPLGGRELSQGLLPLPQPYQA R L D G R E 0 1 0 1 0 2 0 2 0 0 3 0 0 0 1 0 1 0 0 0 0 0 11 0 1196.6513 P98175 P98175 253 263 RBM10 RNA-binding protein 10 yes yes 2 0.040825 88.056 By MS/MS 2.5 1.12 1 1 1 1 4 506010 0 506010 7925 1252 8187 19566;19567;19568;19569 15722 15722 1 0 632210 LDQVSSEIKEK KHGMKVVLISRSKDKLDQVSSEIKEKFKVE SKDKLDQVSSEIKEKFKVETRTIAVDFASE K L D E K F 0 0 0 1 0 1 2 0 0 1 1 2 0 0 0 2 0 0 0 1 0 0 11 1 1274.6718 Q53GQ0 Q53GQ0 87 97 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 0.0069036 113.67 By MS/MS 8 0 2 2 2811900 2811900 0 7926 1587 8188 19570;19571 15723;15724 15724 2 35500 0 LDRLDLAR DSLECTAMTVQILLKLDRLDLARKELKRMQ TVQILLKLDRLDLARKELKRMQDLDEDATL K L D A R K 1 2 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 1 970.55598 O14579 O14579 159 166 COPE Coatomer subunit epsilon yes yes 3 0.010166 104.01 By MS/MS 8 0 1 1 2010200 2010200 0 7927 127 8189 19572 15725 15725 1 25378 0 LDSELKNMQDMVEDYR NLRRRVDQLKSDQSRLDSELKNMQDMVEDY DSELKNMQDMVEDYRNKYEDEINKRTNAEN R L D Y R N 0 1 1 3 0 1 2 0 0 0 2 1 2 0 0 1 0 0 1 1 0 0 16 1 1984.887 CON__P04264;P04264 P04264 252 267 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 1.2782E-07 178.67 By MS/MS By MS/MS 4.92 2.68 3 2 3 4 4 3 1 1 2 2 9 16 88639000 79423000 9215800 + 7928 471;45 8190;8191 19573;19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584;19585;19586;19587;19588;19589;19590;19591;19592;19593;19594;19595;19596;19597 15726;15727;15728;15729;15730;15731;15732;15733;15734;15735;15736;15737;15738;15739;15740;15741;15742;15743;15744;15745;15746;15747;15748;15749;15750 15733 27;28 25 7082500 4074400 LDSELVSFEGVR L D V R 0 1 0 1 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 2 0 0 12 0 1349.6827 REV__Q9HCH5 yes yes 2 0.039442 74.92 By MS/MS By matching 5.82 2.66 1 1 2 2 1 2 1 1 8 3 16278000 11149000 5129500 + 7929 2987 8192 19598;19599;19600;19601;19602;19603;19604;19605;19606;19607;19608 15751;15752 15751 2 502550 5340200 LDSIVIQQGR TVEERIVERAEMKLRLDSIVIQQGRLVDQN EMKLRLDSIVIQQGRLVDQNLNKIGKDEML R L D G R L 0 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1127.6299 O60264;P28370 O60264 627 636 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 7.6707E-15 237.61 By MS/MS 3 0 1 1 1004500 1004500 0 7930 251;755 8193 19609 15753 15753 1 18380 0 LDSLQTLNACCAVYGQK PLLIEKVDSEVLSAKLDSLQTLNACCAVYG SLQTLNACCAVYGQKELKDFLPSLWASIRR K L D Q K E 2 0 1 1 2 2 0 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 17 0 1939.9132 Q96T76 Q96T76 276 292 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 7.9376E-11 228.7 By MS/MS 4.5 0.5 1 1 2 1789600 1789600 0 7931 2240 8194 19610;19611 15754 15754 1 153340 0 LDSPAGTALSPSGHTK VSPAAIKKTILDKVKLDSPAGTALSPSGHT DSPAGTALSPSGHTKLLPRSLAPAGKD___ K L D T K L 2 0 0 1 0 0 0 2 1 0 2 1 0 0 2 3 2 0 0 0 0 0 16 0 1537.7736 P32322 P32322 292 307 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2;3 3.9445E-05 196.7 By MS/MS By matching 8 0 3 2 1 7476200 7446100 30052 7932 797 8195 19612;19613;19614 15755;15756 15756 2 94007 40554 LDSQKHIDFSLR RVRKQVVNIPSFIVRLDSQKHIDFSLRSPY IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN R L D L R S 0 1 0 2 0 1 0 0 1 1 2 1 0 1 0 2 0 0 0 0 0 0 12 1 1457.7627 P46781 P46781 151 162 RPS9 40S ribosomal protein S9 yes yes 2;3;4 0.00030989 163.46 By MS/MS 9 0.632 1 3 1 5 15080000 15080000 0 7933 918 8196 19615;19616;19617;19618;19619 15757;15758;15759 15759 3 300800 0 LDSQLEILSPSR EDLLKAIFNIKFLARLDSQLEILSPSRSAR LARLDSQLEILSPSRSARVQFHLMELNRSV R L D S R S 0 1 0 1 0 1 1 0 0 1 3 0 0 0 1 3 0 0 0 0 0 0 12 0 1356.7249 Q53R41 Q53R41 643 654 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 5.3696E-05 166.29 By MS/MS 5 0 1 1 1297700 1297700 0 7934 1591 8197 19620 15760 15760 1 13016 0 LDSSAVLDTGK DKVEDALNLKEEFDRLDSSAVLDTGKYVGL EFDRLDSSAVLDTGKYVGLVRVLAKHGKLQ R L D G K Y 1 0 0 2 0 0 0 1 0 0 2 1 0 0 0 2 1 0 0 1 0 0 11 0 1104.5663 P42704 P42704 740 750 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.5642E-05 167.93 By MS/MS By matching 3.75 0.829 2 1 1 3 1 10181000 9945300 235290 7935 886 8198 19621;19622;19623;19624 15761 15761 1 230220 29949 LDSTQVGDFLGDSAR TSVEDIAQFLHQEERLDSTQVGDFLGDSAR LDSTQVGDFLGDSARFNKEVMYAYVDQLDF R L D A R F 1 1 0 3 0 1 0 2 0 0 2 0 0 1 0 2 1 0 0 1 0 0 15 0 1579.7478 Q9Y6D5 Q9Y6D5 688 702 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 4.2602E-05 206.45 By MS/MS 2.5 0.5 1 1 2 784730 784730 0 7936 2940 8199 19625;19626 15762 15762 1 229820 0 LDTAMWLSR GPQGAGAVQFMMTNKLDTAMWLSRLFTVYC FMMTNKLDTAMWLSRLFTVYCSALFVLPLL K L D S R L 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 1 1 0 0 0 0 9 0 1091.5434 P57088 P57088 23 31 TMEM33 Transmembrane protein 33 yes yes 2 0.00011491 158.76 By MS/MS 8.5 0.5 1 1 2 721030 721030 0 7937 1078 8200 19627;19628 15763;15764 15764 2 12449 0 LDTHPAMVTVLEMGAAR NVLGSRVTNVKVTLRLDTHPAMVTVLEMGA THPAMVTVLEMGAARHFLRMQQLAKTQEER R L D A R H 3 1 0 1 0 0 1 1 1 0 2 0 2 0 1 0 2 0 0 2 0 0 17 0 1810.907 Q12931 Q12931 603 619 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.0080568 89.506 By MS/MS 5 0 1 1 341410 341410 0 7938 1340 8201 19629 15765 15765 1 3424.1 0 LDTIFFAK QPGEEPAGSVVQDSRLDTIFFAKQVINNAC SVVQDSRLDTIFFAKQVINNACATQAIVSV R L D A K Q 1 0 0 1 0 0 0 0 0 1 1 1 0 2 0 0 1 0 0 0 0 0 8 0 953.52222 Q9Y5K5 Q9Y5K5 74 81 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 2 4.3547E-06 181.81 By MS/MS 7 0 1 1 371440 371440 0 7939 2912 8202 19630 15766 15766 1 5831 0 LDTSEVVFNSK GEEQGSDAALHFNPRLDTSEVVFNSKEQGS FNPRLDTSEVVFNSKEQGSWGREERGPGVP R L D S K E 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 2 1 0 0 2 0 0 11 0 1237.619 P47929 P47929 55 65 LGALS7 Galectin-7 yes yes 2 9.0899E-15 228.84 By matching By MS/MS 6 3.33 1 1 1 1 1 1 1 2 1 8 1380300 135820 1244500 7940 930 8203 19631;19632;19633;19634;19635;19636;19637;19638;19639 15767;15768;15769;15770;15771;15772;15773;15774 15768 7 7320.4 1476700 LDVEEVDLSLR EPDEVLKEFVLPFLRLDVEEVDLSLRIFIQ PFLRLDVEEVDLSLRIFIQTLEANACREEY R L D L R I 0 1 0 2 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 11 0 1286.6718 P57678 P57678 662 672 GEMIN4 Gem-associated protein 4 yes yes 2 4.8552E-07 217.66 By MS/MS 4 0 1 1 1221500 1221500 0 7941 1079 8204 19640 15775 15775 1 114950 0 LDVGNAEVKLEEENR ENDQLKKGAAVDGGKLDVGNAEVKLEEENR LDVGNAEVKLEEENRSLKADLQKLKDELAS K L D N R S 1 1 2 1 0 0 4 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 15 1 1713.8533 P51572 P51572 168 182 BCAP31 B-cell receptor-associated protein 31 yes yes 2;3 0.00040486 177.36 By MS/MS 8 0 2 2 5522000 5522000 0 7942 999 8205 19641;19642 15776;15777 15777 2 69714 0 LDVGNFSWGSECCTR TVRVRGGNKKYRALRLDVGNFSWGSECCTR LDVGNFSWGSECCTRKTRIIDVVYNASNNE R L D T R K 0 1 1 1 2 0 1 2 0 0 1 0 0 1 0 2 1 1 0 1 0 0 15 0 1786.7403 P62241 P62241 60 74 RPS8 40S ribosomal protein S8 yes yes 2 5.0005E-44 333.44 By MS/MS 8 0 1 1 4889200 4889200 0 7943 1143 8206 19643 15778 15778 1 61726 0 LDVQFSGLTK PTHFTVNAKAAGKGKLDVQFSGLTKGDAVR AGKGKLDVQFSGLTKGDAVRDVDIIDHHDN K L D T K G 0 0 0 1 0 1 0 1 0 0 2 1 0 1 0 1 1 0 0 1 0 0 10 0 1106.5972 P21333 P21333 907 916 FLNA Filamin-A yes yes 2 0.032219 80.916 By MS/MS 2 0.816 1 1 1 3 1575200 1575200 0 7944 677 8207 19644;19645;19646 15779 15779 1 464790 0 LDVTTQTPLTPEQLR GTEQQGSHLNPEQLRLDVTTQTPLTPEQLR LDVTTQTPLTPEQLRAVENTVQEAVGQDEA R L D L R A 0 1 0 1 0 2 1 0 0 0 3 0 0 0 2 0 4 0 0 1 0 0 15 0 1710.9152 Q5JTZ9 Q5JTZ9 664 678 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 5.5225E-24 283.35 By MS/MS 5.5 1.12 1 1 1 1 4 14173000 14173000 0 7945 1613 8208 19647;19648;19649;19650 15780;15781 15781 2 1037300 0 LDYILGLK RRLVRIGVLDEGKMKLDYILGLKIEDFLER LDEGKMKLDYILGLKIEDFLERRLQTQVFK K L D L K I 0 0 0 1 0 0 0 1 0 1 3 1 0 0 0 0 0 0 1 0 0 0 8 0 933.55352 P46781 P46781 94 101 RPS9 40S ribosomal protein S9 yes yes 2 0.0046498 127.12 By MS/MS 8.5 0.5 1 1 2 7211900 7211900 0 7946 918 8209 19651;19652 15782;15783 15783 2 140290 0 LDYLSSLK FQGHGAGNLAGLKGRLDYLSSLKVKGLVLG LAGLKGRLDYLSSLKVKGLVLGPIHKNQKD R L D L K V 0 0 0 1 0 0 0 0 0 0 3 1 0 0 0 2 0 0 1 0 0 0 8 0 937.51205 P08195 P08195 248 255 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0021752 141.52 By MS/MS 6 2.16 1 1 1 3 8424500 8424500 0 7947 519 8210 19653;19654;19655 15784;15785;15786 15785 3 324600 0 LEAAEDIAYQLSR NSLATAGDGLIELRKLEAAEDIAYQLSRSR RKLEAAEDIAYQLSRSRNITYLPAGQSVLL K L E S R S 3 1 0 1 0 1 2 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1477.7413 P35232 P35232 241 253 PHB Prohibitin yes yes 2 3.7726E-24 275.48 By MS/MS 8 0 1 1 464440 464440 0 7948 814 8211 19656 15787 15787 1 5863.5 0 LEAASSALGGPTLTHAVTR SVSLHKKFIADCYTRLEAASSALGGPTLTH SSALGGPTLTHAVTRATKMLTATAMPTVAT R L E T R A 4 1 0 0 0 0 1 2 1 0 3 0 0 0 1 2 3 0 0 1 0 0 19 0 1850.985 Q9UPU5 Q9UPU5 877 895 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.0061128 87.088 By MS/MS 2 0 1 1 444700 444700 0 7949 2802 8212 19657 15788 15788 1 150420 0 LEAAYLDLQR ILQESRMMIPDCQRRLEAAYLDLQRILENE DCQRRLEAAYLDLQRILENEKDLEEAEEYK R L E Q R I 2 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 10 0 1190.6295 O75347 O75347 71 80 TBCA Tubulin-specific chaperone A yes yes 2 0.0084096 99.788 By MS/MS 10 0 1 1 222290 222290 0 7950 312 8213 19658 15789 15789 1 11981 0 LEAEGVPEVSEK MAELAKELPQVSFVKLEAEGVPEVSEKYEI FVKLEAEGVPEVSEKYEISSVPTFLFFKNS K L E E K Y 1 0 0 0 0 0 4 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 12 0 1285.6402 O76003 O76003 68 79 GLRX3 Glutaredoxin-3 yes yes 2 0.00068969 130.94 By MS/MS 7 0 1 1 1962000 1962000 0 7951 358 8214 19659 15790 15790 1 30799 0 LEAGDKKPDAK WEAFPVYRQPPESLKLEAGDKKPDAK____ ESLKLEAGDKKPDAK_______________ K L E A K - 2 0 0 2 0 0 1 1 0 0 1 3 0 0 1 0 0 0 0 0 0 0 11 2 1170.6245 O75489 O75489 254 264 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 4.1545E-06 196.52 By MS/MS 8 0 1 1 853670 853670 0 7952 330 8215 19660 15791 15791 1 10778 0 LEAGDYADLVK KEALESVEVLIKNPKLEAGDYADLVKALKK KNPKLEAGDYADLVKALKKVVGKDTNVMLV K L E V K A 2 0 0 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1192.5976 Q14008 Q14008 312 322 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 3.3092E-05 157.75 By MS/MS 3.5 1.12 1 1 1 1 4 5253200 5253200 0 7953 1417 8216 19661;19662;19663;19664 15792;15793;15794 15792 3 1267800 0 LEALDANSR EPESIRKWREEQMERLEALDANSRKQEAEW EEQMERLEALDANSRKQEAEWKEKAIKELE R L E S R K 2 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 987.49852 P09496 P09496 121 129 CLTA Clathrin light chain A yes yes 2 0.0139 93.598 By MS/MS 8 0 1 1 1565200 1565200 0 7954 536 8217 19665 15795 15795 1 19761 0 LEALITQTR MRLRSGGTEGLLAEKLEALITQTRAKQAAT GLLAEKLEALITQTRAKQAATMSEVEWRGR K L E T R A 1 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1043.5975 Q9UHB9 Q9UHB9 278 286 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0011576 132.01 By MS/MS By matching 5 0 2 1 1 1557100 1529300 27757 7955 2728 8218 19666;19667 15796 15796 1 15338 23310 LEAMCFDGVK GQEYAQVIKMLGNGRLEAMCFDGVKRLCHI LGNGRLEAMCFDGVKRLCHIRGKLRKKVWI R L E V K R 1 0 0 1 1 0 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1168.5257 P47813 P47813 47 56 EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal yes yes 2 0.0099922 93.598 By MS/MS 9 0 1 1 542660 542660 0 7956 927 8219 19668 15797 15797 489 1 10680 0 LEAQVNR EQGSMILALSDTEQRLEAQVNRNTIYSTLV ALSDTEQRLEAQVNRNTIYSTLVTCVTFVA R L E N R N 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 828.44537 Q96ER9 Q96ER9 378 384 CCDC51 Coiled-coil domain-containing protein 51 yes yes 2 0.047397 91.626 By MS/MS By matching 7 0 2 1 1 1192700 1154300 38404 7957 2149 8220 19669;19670 15798 15798 1 18120 69164 LEARLEKVADEK QLQEEKQELLEYMRKLEARLEKVADEKWNE MRKLEARLEKVADEKWNEDATTEDEEAAVG K L E E K W 2 1 0 1 0 0 3 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 12 2 1399.7671 Q9P1Z2 Q9P1Z2 503 514 CALCOCO1 Calcium-binding and coiled-coil domain-containing protein 1 yes yes 2 0.0051627 131.12 By MS/MS 6 0 1 1 2399300 2399300 0 7958 2674 8221 19671 15799 15799 1 16493 0 LEATINELV KGQKVGEFSGANKEKLEATINELV______ GANKEKLEATINELV_______________ K L E L V - 1 0 1 0 0 0 2 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5441 P10599 P10599 97 105 TXN Thioredoxin yes yes 2 0.0078633 104.2 By MS/MS 10 0 1 1 708210 708210 0 7959 563 8222 19672 15800 15800 1 38170 0 LECADLLETR AGEHNKACSLLGKLRLECADLLETRGVVLR LGKLRLECADLLETRGVVLRDPTLFSFLWV R L E T R G 1 1 0 1 1 0 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1218.5914 Q6PI48 Q6PI48 457 466 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 9.8929E-08 192.26 By MS/MS 5 0 1 1 3122500 3122500 0 7960 1717 8223 19673 15801 15801 1 31317 0 LECSEELGDLVK QGRKQLLEKWLKEDKLECSEELGDLVKSVD EDKLECSEELGDLVKSVDPTLALSVYLRAN K L E V K S 0 0 0 1 1 0 3 1 0 0 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1390.665 Q00610;P53675 Q00610 457 468 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 5.1062E-05 167.12 By MS/MS 2 1 1 1 2 659520 659520 0 7961 1262 8224 19674;19675 15802;15803 15802 2 77251 0 LECVEPNCR IFRKKAKTTKKIVLRLECVEPNCRSKRMLA KKIVLRLECVEPNCRSKRMLAIKRCKHFEL R L E C R S 0 1 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 0 1175.5063 P83881 P83881 70 78 RPL36A 60S ribosomal protein L36a no no 2 0.0021652 119.21 By MS/MS 9.5 0.5 1 1 2 2960400 2960400 0 7962 1242 8225 19676;19677 15804;15805 15804 2 146060 0 LEDAADVYR AVEETKGELLLQLCRLEDAADVYRGLQERN LLQLCRLEDAADVYRGLQERNPENWAYYKG R L E Y R G 2 1 0 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1050.4982 Q9BXJ9 Q9BXJ9 240 248 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.0024404 115.71 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 3635600 3590700 44884 7963 2357 8226 19678;19679;19680;19681;19682 15806 15806 1 270160 95633 LEDDAKDNQQK DMLKRVEPLRNELQKLEDDAKDNQQKANEV ELQKLEDDAKDNQQKANEVEQMIRDLEASI K L E Q K A 1 0 1 3 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 11 1 1302.6052 Q14204 Q14204 3419 3429 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.9552E-05 178.84 By MS/MS 2 0 1 1 246930 246930 0 7964 1433 8227 19683 15807 15807 1 83521 0 LEDFLDNQR YWRDWRSLCAVKFLRLEDFLDNQRHGMCLY AVKFLRLEDFLDNQRHGMCLYLEPQGTLFA R L E Q R H 0 1 1 2 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1148.5462 Q16513 Q16513 451 459 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0011886 131.62 By MS/MS 3.5 0.5 1 1 2 666000 666000 0 7965 1547 8228 19684;19685 15808 15808 1 27350 0 LEDIANAALAASAVTQVAK ESYYLNFISAISRSKLEDIANAALAASAVT ANAALAASAVTQVAKVFDQYLNFITLEDDM K L E A K V 7 0 1 1 0 1 1 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 19 0 1855.0051 Q8WVM8 Q8WVM8 127 145 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.00017957 158.29 By MS/MS 5 0 1 1 164910 164910 0 7966 2028 8229 19686 15809 15809 1 1654 0 LEDLATLIQK NPRTLFKLEDLRKQRLEDLATLIQKIYRGW LRKQRLEDLATLIQKIYRGWKCRTHFLLMK R L E Q K I 1 0 0 1 0 1 1 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1142.6547 O43795 O43795 704 713 MYO1B Unconventional myosin-Ib yes yes 2 1.1628E-05 173.39 By MS/MS 3.5 0.5 1 1 2 752550 752550 0 7967 235 8230 19687;19688 15810;15811 15811 1 49684 0 LEDLIVK PYVMNRGSTPYGGVKLEDLIVKDGLTDVYN STPYGGVKLEDLIVKDGLTDVYNKIHMGSC K L E V K D 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 7 0 828.49567 P24752 P24752 175 181 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 1;2 0.0065081 149.4 By MS/MS 7.33 0.471 2 1 3 11193000 11193000 0 7968 716 8231 19689;19690;19691 15812;15813 15812 1 171360 0 LEDLIVKDGLTDVYNK PYVMNRGSTPYGGVKLEDLIVKDGLTDVYN EDLIVKDGLTDVYNKIHMGSCAENTAKKLN K L E N K I 0 0 1 3 0 0 1 1 0 1 3 2 0 0 0 0 1 0 1 2 0 0 16 1 1833.9724 P24752 P24752 175 190 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2;3 1.4495E-06 217.46 By MS/MS 7 0 4 4 3852900 3852900 0 7969 716 8232 19692;19693;19694;19695 15814;15815;15816;15817;15818 15816 5 60483 0 LEDSTRETQSQLETER LQAEIKRIEERCRRKLEDSTRETQSQLETE EDSTRETQSQLETERSRYQREIDKLRQRPY K L E E R S 0 2 0 1 0 2 4 0 0 0 2 0 0 0 0 2 3 0 0 0 0 0 16 1 1920.9025 P15924 P15924 1917 1932 DSP Desmoplakin yes yes 3 1.3492E-07 172.57 By MS/MS 4 2.94 1 1 1 3 743160 0 743160 7970 628 8233 19696;19697;19698 15819;15820;15821;15822 15821 4 0 170470 LEDTKLIK VDFELIKVEGKVGGRLEDTKLIKGVIVDKD EGKVGGRLEDTKLIKGVIVDKDFSHPQMPK R L E I K G 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 1 0 0 0 0 0 8 1 958.5699 P48643 P48643 219 226 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.003234 124.98 By MS/MS 6 0 1 1 997540 997540 0 7971 940 8234 19699 15823 15823 1 6857.3 0 LEDVLPLAFTR RKNRSSAVDPEPQVKLEDVLPLAFTRLCEP PQVKLEDVLPLAFTRLCEPKEASYSLIRKY K L E T R L 1 1 0 1 0 0 1 0 0 0 3 0 0 1 1 0 1 0 0 1 0 0 11 0 1272.7078 Q5SSJ5 Q5SSJ5 259 269 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 2 0.0085984 94.409 By MS/MS 5 0 1 1 106250 106250 0 7972 1620 8235 19700 15824 15824 1 1065.6 0 LEEAILGSIGAR MNSLTFKKSKDMRAKLEEAILGSIGARQEM RAKLEEAILGSIGARQEMVRRSRGQLGTYT K L E A R Q 2 1 0 0 0 0 2 2 0 2 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1227.6823 Q96N67 Q96N67 1396 1407 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.0397E-12 229.53 By MS/MS 2.5 0.5 1 1 2 721170 721170 0 7973 2201 8236 19701;19702 15825;15826 15825 2 212130 0 LEEEKLSQK NKECRQSLSHMLSAKLEEEKLSQKKESEKR HMLSAKLEEEKLSQKKESEKRNVTVQPDDP K L E Q K K 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 9 1 1102.587 P53618 P53618 647 655 COPB1 Coatomer subunit beta yes yes 2 0.0058732 131.62 By MS/MS 4 0 1 1 2780200 2780200 0 7974 1033 8237 19703 15827 15827 1 261630 0 LEEEKLSQKK NKECRQSLSHMLSAKLEEEKLSQKKESEKR MLSAKLEEEKLSQKKESEKRNVTVQPDDPI K L E K K E 0 0 0 0 0 1 3 0 0 0 2 3 0 0 0 1 0 0 0 0 0 0 10 2 1230.682 P53618 P53618 647 656 COPB1 Coatomer subunit beta yes yes 2;3 2.7921E-07 178.55 By MS/MS By matching 4.33 0.471 4 2 5 1 7743700 7728800 14898 7975 1033 8238 19704;19705;19706;19707;19708;19709 15828;15829 15829 2 654080 31743 LEEEQIILEDQNCK KLQLEKVTTEAKLKKLEEEQIILEDQNCKL KLEEEQIILEDQNCKLAKEKKLLEDRIAEF K L E C K L 0 0 1 1 1 2 4 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 14 0 1759.8298 P35579 P35579 976 989 MYH9 Myosin-9 yes yes 2 1.0732E-32 295.26 By MS/MS 2 0 1 1 277990 277990 0 7976 824 8239 19710 15830 15830 1 94029 0 LEEGKYLILKDPNK NAWGILRCVIDICMKLEEGKYLILKDPNKQ KLEEGKYLILKDPNKQVIRVYSLPDGTFSS K L E N K Q 0 0 1 1 0 0 2 1 0 1 3 3 0 0 1 0 0 0 1 0 0 0 14 2 1658.9243 O15371 O15371 501 514 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.012703 127.78 By MS/MS 6 0.816 1 1 1 3 5915800 5915800 0 7977 185 8240 19711;19712;19713 15831 15831 1 56671 0 LEEGPPVTTVLTR ANDATFEIKKCDLHRLEEGPPVTTVLTRED HRLEEGPPVTTVLTREDGLKYYRMMQTVRR R L E T R E 0 1 0 0 0 0 2 1 0 0 2 0 0 0 2 0 3 0 0 2 0 0 13 0 1410.7718 P08559 P08559 46 58 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0011299 140.78 By MS/MS By MS/MS 8.5 1.12 1 1 1 1 3 1 3382800 3311800 71050 7978 524 8241 19714;19715;19716;19717 15832;15833;15834 15832 2 49629 127960 LEEIPKYKDLLK NEQSDLVHRISGDKKLEEIPKYKDLLKLFT DKKLEEIPKYKDLLKLFTTMELMRWSTLVE K L E L K L 0 0 0 1 0 0 2 0 0 1 3 3 0 0 1 0 0 0 1 0 0 0 12 2 1487.8599 O00232 O00232 296 307 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.0013799 113.67 By MS/MS 6 0 1 1 2813800 2813800 0 7979 94 8242 19718 15835 15835 1 19343 0 LEEIPLIK KNQEKKIDYFERAKRLEEIPLIKSAYEEQR YFERAKRLEEIPLIKSAYEEQRIKDMDLWE R L E I K S 0 0 0 0 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 0 0 0 8 0 953.57973 Q14152 Q14152 704 711 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.018523 101.28 By MS/MS 3.5 1.12 1 1 1 1 4 34388000 34388000 0 7980 1422 8243 19719;19720;19721;19722 15836;15837 15836 2 1193500 0 LEELYTK QSQNSGPGQPAVWHRLEELYTKKLWHQLTL GQPAVWHRLEELYTKKLWHQLTLQVLDFVQ R L E T K K 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 7 0 894.46985 Q9UNM6 Q9UNM6 25 31 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.012205 129.68 By MS/MS 7 0 1 1 2517300 2517300 0 7981 2791 8244 19723 15838 15838 1 39517 0 LEEQDEFEK QAQLQRLGVLHVGQKLEEQDEFEKIYKNAW LHVGQKLEEQDEFEKIYKNAWADNANACAK K L E E K I 0 0 0 1 0 1 4 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1165.5139 Q9NTJ5 Q9NTJ5 424 432 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0048784 109.44 By MS/MS 2 0 1 1 261300 261300 0 7982 2576 8245 19724 15839 15839 1 88383 0 LEESDVLQEAR EMKESIKKFRDEARRLEESDVLQEARRKYK EARRLEESDVLQEARRKYKTIESETVRTSE R L E A R R 1 1 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1287.6307 O43615 O43615 91 101 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 3.4077E-06 179.57 By MS/MS 7 0 1 1 2059700 2059700 0 7983 221 8246 19725 15840 15840 1 32334 0 LEETLEQLAK KWQKSLQYERDQRIRLEETLEQLAKQHNHL DQRIRLEETLEQLAKQHNHLERAFRGATVL R L E A K Q 1 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1172.6289 P22059 P22059 304 313 OSBP Oxysterol-binding protein 1 yes yes 2 0.0012537 118.71 By MS/MS 4.5 0.5 1 1 2 1534100 1534100 0 7984 686 8247 19726;19727 15841 15841 1 132210 0 LEETLPVIR MLGLGDMNADQLASKLEETLPVIRSVSEQF DQLASKLEETLPVIRSVSEQFKDPEQTTFI K L E I R S 0 1 0 0 0 0 2 0 0 1 2 0 0 0 1 0 1 0 0 1 0 0 9 0 1068.6179 O43681 O43681 222 230 ASNA1 ATPase ASNA1 yes yes 2 0.0026023 119.41 By MS/MS 7 0 1 1 799470 799470 0 7985 226 8248 19728 15842 15842 1 12550 0 LEETQALLR AAKDADERIEKVQTRLEETQALLRKKEKEF EKVQTRLEETQALLRKKEKEFEETMDALQA R L E L R K 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1071.5924 Q14203 Q14203 998 1006 DCTN1 Dynactin subunit 1 yes yes 2 6.7675E-05 168.26 By MS/MS 3 0 1 1 3925400 3925400 0 7986 1432 8249 19729 15843 15843 1 71825 0 LEEWLGR SSQHLFLDLPKLEKRLEEWLGRTLPGSDWT DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT R L E G R T 0 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 7 0 901.46577 P56192 P56192 461 467 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.003097 164.89 By MS/MS 4 0 1 1 2601100 2601100 0 7987 1067 8250 19730 15844 15844 1 244780 0 LEEYLTQQEIGK LGCFVDLSSQEGLQRLEEYLTQQEIGKKAQ LQRLEEYLTQQEIGKKAQQETGEREASCRD R L E G K K 0 0 0 0 0 2 3 1 0 1 2 1 0 0 0 0 1 0 1 0 0 0 12 0 1449.7351 Q86XL3 Q86XL3 599 610 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 8.3513E-05 158.08 By MS/MS 4 0 1 1 1388700 1388700 0 7988 1845 8251 19731 15845 15845 1 130680 0 LEFSDETFGSNIPK VIGVLEPLDPEDYTKLEFSDETFGSNIPKQ KLEFSDETFGSNIPKQFVPAVEKGFLDACE K L E P K Q 0 0 1 1 0 0 2 1 0 1 1 1 0 2 1 2 1 0 0 0 0 0 14 0 1582.7515 Q96RP9 Q96RP9 567 580 GFM1 Elongation factor G, mitochondrial yes yes 2 5.8913E-11 229 By MS/MS 5 0 1 1 2241800 2241800 0 7989 2223 8252 19732 15846 15846 1 22484 0 LEFWCTDVK PRVLDLQQIKGMKDRLEFWCTDVKSMEMLV KGMKDRLEFWCTDVKSMEMLVEHQAHDILT R L E V K S 0 0 0 1 1 0 1 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 9 0 1196.5536 Q9UNM6 Q9UNM6 353 361 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0020816 126.24 By MS/MS 7 0 1 1 526680 526680 0 7990 2791 8253 19733 15847 15847 1 8268 0 LEGDAALNR DKLVGEIKEEEKNEKLEGDAALNRLFQQIY EEKNEKLEGDAALNRLFQQIYSDGSDEVKR K L E N R L 2 1 1 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 957.48796 Q9Y2Z0 Q9Y2Z0 303 311 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.044911 78.149 By MS/MS 7 0 1 1 429490 429490 0 7991 2850 8254 19734 15848 15848 1 6742.3 0 LEGDNVNPESQLIQQSEQSESETAGSTK RELDMEPYTVAGVAKLEGDNVNPESQLIQQ QQSEQSESETAGSTKYRLVGVLVHSGQASG K L E T K Y 1 0 2 1 0 4 5 2 0 1 2 1 0 0 1 5 2 0 0 1 0 0 28 0 3004.3745 Q93008 Q93008 1835 1862 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 1.1388E-12 159.75 By MS/MS 2 0 1 1 432890 432890 0 7992 2085 8255 19735 15849 15849 1 146420 0 LEGEVTPNSLSTSYK QEEKTSTATSKTQTRLEGEVTPNSLSTSYK LEGEVTPNSLSTSYKTVSLPLSSPNIKLNL R L E Y K T 0 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 2 0 1 1 0 0 15 0 1623.7992 Q8IWZ3 Q8IWZ3 1648 1662 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 4.5681E-07 234.49 By MS/MS 1.5 0.5 1 1 2 507620 507620 0 7993 1872 8256 19736;19737 15850;15851 15851 2 154250 0 LEGFYGER YKEPAITKLAEISHRLEGFYGERFGEDVVE LAEISHRLEGFYGERFGEDVVEVIKDSNPV R L E E R F 0 1 0 0 0 0 2 2 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 969.4556 Q96N67 Q96N67 1877 1884 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.029286 90.37 By MS/MS 2.5 0.5 1 1 2 2032000 2032000 0 7994 2201 8257 19738;19739 15852 15852 1 577680 0 LEGGSGGDSEVQR SIIFMDEIDSIGSSRLEGGSGGDSEVQRTM SRLEGGSGGDSEVQRTMLELLNQLDGFEAT R L E Q R T 0 1 0 1 0 1 2 4 0 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1289.5848 P62195 P62195 259 271 PSMC5 26S protease regulatory subunit 8 yes yes 2 1.1216E-08 185.99 By MS/MS 8.67 1.25 1 1 1 3 16281000 16281000 0 7995 1142 8258 19740;19741;19742 15853;15854;15855 15854 2 261300 0 LEGLGSSEADQDGLASTVR KSQEHEQRLAALQGRLEGLGSSEADQDGLA GSSEADQDGLASTVRSLGETQLVLYGDVEE R L E V R S 2 1 0 2 0 1 2 3 0 0 3 0 0 0 0 3 1 0 0 1 0 0 19 0 1903.9123 Q07065 Q07065 455 473 CKAP4 Cytoskeleton-associated protein 4 yes yes 2 0.00024904 119.65 By MS/MS 5 0 1 1 2149000 2149000 0 7996 1300 8259 19743 15856 15856 1 21553 0 LEGNSPQGSNQGVK FFTLARDIKAKMDKKLEGNSPQGSNQGVKI KLEGNSPQGSNQGVKITPDQQKRSSFFRCV K L E V K I 0 0 2 0 0 2 1 3 0 0 1 1 0 0 1 2 0 0 0 1 0 0 14 0 1413.6848 P61006 P61006 177 190 RAB8A Ras-related protein Rab-8A yes yes 2 5.6241E-06 212.68 By MS/MS 8.5 0.5 1 1 2 828770 828770 0 7997 1102 8260 19744;19745 15857 15857 1 14573 0 LEGNTVGVEAAR VIKEIEDFDSLEALRLEGNTVGVEAARVIA ALRLEGNTVGVEAARVIAKALEKKSELKRC R L E A R V 2 1 1 0 0 0 2 2 0 0 1 0 0 0 0 0 1 0 0 2 0 0 12 0 1214.6255 P46060 P46060 56 67 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 5.3696E-05 166.29 By MS/MS By matching 5 0 2 1 1 3234400 3216300 18123 7998 908 8261 19746;19747 15858 15858 1 32258 15219 LEGQGDVPTPK IEIKLKKPEAVRWEKLEGQGDVPTPKQFVA RWEKLEGQGDVPTPKQFVADVKNLYPSSSP K L E P K Q 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 0 1 0 0 1 0 0 11 0 1139.5823 Q9Y2Z0 Q9Y2Z0 257 267 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.001113 119.34 By MS/MS 7 0 1 1 1194500 1194500 0 7999 2850 8262 19748 15859 15859 1 18751 0 LEGTEDLSDVLVR AFACLLHLANEKNLKLEGTEDLSDVLVRQG LKLEGTEDLSDVLVRQGD____________ K L E V R Q 0 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 0 2 0 0 13 0 1444.7409 Q15003 Q15003 726 738 NCAPH Condensin complex subunit 2 yes yes 2 6.2445E-08 247.79 By MS/MS 6 1.87 1 1 1 1 4 4974700 4974700 0 8000 1468 8263 19749;19750;19751;19752 15860;15861 15860 2 373740 0 LEHEYIQNFK FPGSIALKKVKFQAKLEHEYIQNFKILQAG KFQAKLEHEYIQNFKILQAGFKRMGVDKII K L E F K I 0 0 1 0 0 1 2 0 1 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1319.651 Q15691 Q15691 67 76 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2 0.047053 81.525 By MS/MS 8 0 1 1 0 0 0 8001 1524 8264 19753 15862 15862 1 0 0 LEHTAQTYSELQGER VATWVDETLSSVASKLEHTAQTYSELQGER LEHTAQTYSELQGERIVSLHCCALYTCAQL K L E E R I 1 1 0 0 0 2 3 1 1 0 2 0 0 0 0 1 2 0 1 0 0 0 15 0 1760.8329 O95071 O95071 458 472 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.0058059 144.18 By MS/MS 2.5 1.12 1 1 1 1 4 2613200 2613200 0 8002 384 8265 19754;19755;19756;19757 15863 15863 1 393760 0 LEILQIHTK FDREVDIGIPDATGRLEILQIHTKNMKLAD PDATGRLEILQIHTKNMKLADDVDLEQVAN R L E T K N 0 0 0 0 0 1 1 0 1 2 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1093.6495 P55072 P55072 378 386 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.050027 72.243 By MS/MS 4.5 0.5 1 1 2 2223100 2223100 0 8003 1054 8266 19758;19759 15864 15864 1 161400 0 LEKEQLKQK L E Q K 0 0 0 0 0 2 2 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 9 2 1142.6659 REV__Q9BXS9 yes yes 3 0.001293 109.44 By MS/MS 3 0 1 1 852360 852360 0 + 8004 2983 8267 19760 15865 15865 1 15596 0 LELAQYR AAQTRAMKQVAGTMKLELAQYREVAAFAQF KQVAGTMKLELAQYREVAAFAQFGSDLDAA K L E Y R E 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 891.48142 P25705 P25705 435 441 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.015743 120.49 By MS/MS 6 0 1 1 54590000 54590000 0 8005 723 8268 19761 15866 15866 1 375270 0 LELCDER EQCEQLEKCVKARERLELCDERVSSRSHTE KCVKARERLELCDERVSSRSHTEEDCTEEL R L E E R V 0 1 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 933.42258 P07919 P07919 50 56 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial yes yes 2 0.029966 104.75 By MS/MS By matching 10 0 2 1 1 702140 669320 32823 8006 515 8269 19762;19763 15867 15867 1 36074 42023 LELNLVR ______________________________ ______________________________ R L E V R L 0 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 855.5178 Q9NZ43 Q9NZ43 6 12 USE1 Vesicle transport protein USE1 yes yes 2 0.020574 111.82 By MS/MS 7.5 0.5 1 1 2 2251700 2251700 0 8007 2644 8270 19764;19765 15868 15868 1 29153 0 LELSSSASPQEER PPLERTEGQTPSSSRLELSSSASPQEERTV SRLELSSSASPQEERTVGVAFNQETGHWER R L E E R T 1 1 0 0 0 1 3 0 0 0 2 0 0 0 1 4 0 0 0 0 0 0 13 0 1431.6842 Q9C0C7 Q9C0C7 632 644 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 2 0.0023453 111.5 By MS/MS 3 0 1 1 163990 163990 0 8008 2391 8271 19766 15869 15869 1 3000.6 0 LENDGATALAEAFR GKPLALKVFVAGRNRLENDGATALAEAFRV RLENDGATALAEAFRVIGTLEEVHMPQNGI R L E F R V 4 1 1 1 0 0 2 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1476.7209 P46060 P46060 192 205 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 3.3336E-05 193 By MS/MS 4.5 0.5 1 1 2 3500800 3500800 0 8009 908 8272 19767;19768 15870 15870 1 70208 0 LENDQIESLR PAGHQIGTVSPLFQKLENDQIESLRQRFGG PLFQKLENDQIESLRQRFGGGQAKTSPKPA K L E L R Q 0 1 1 1 0 1 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1215.6095 P56192 P56192 805 814 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 3.3791E-20 270.54 By MS/MS By MS/MS 5.43 1.5 3 1 1 1 1 6 1 33376000 33104000 272110 8010 1067 8273 19769;19770;19771;19772;19773;19774;19775 15871;15872;15873;15874 15872 4 2826600 579780 LENEIQTYR CQNTEYQQLLDIKIRLENEIQTYRSLLEGE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG R L E Y R S 0 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1164.5775 CON__P13645;P13645;CON__P02535-1 CON__P13645 442 450 KRT10 Keratin, type I cytoskeletal 10 yes no 2 9.3532E-29 287.48 By MS/MS By MS/MS 5.41 2.79 2 2 3 2 2 3 2 2 2 2 10 12 178880000 69448000 109430000 + 8011 50 8274 19776;19777;19778;19779;19780;19781;19782;19783;19784;19785;19786;19787;19788;19789;19790;19791;19792;19793;19794;19795;19796;19797 15875;15876;15877;15878;15879;15880;15881;15882;15883;15884;15885;15886;15887;15888;15889;15890;15891;15892;15893;15894;15895;15896;15897;15898;15899;15900;15901 15884 26 5510100 54156000 LENLDSDVVQLR EAQNSHVYWWRYCIRLENLDSDVVQLRERH CIRLENLDSDVVQLRERHWRIFSLSGTLET R L E L R E 0 1 1 2 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 12 0 1399.7307 Q9Y2S7 Q9Y2S7 269 280 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 6.8401E-09 218.55 By MS/MS 7 0 1 1 3147600 3147600 0 8012 2842 8275 19798 15902 15902 1 49411 0 LENNDNKPVTNSR IFVKDVPNNQLRHIRLENNDNKPVTNSRDT IRLENNDNKPVTNSRDTQEVPLEKAKQVLK R L E S R D 0 1 4 1 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1499.7328 Q7Z739 Q7Z739 521 533 YTHDF3 YTH domain-containing family protein 3 no no 2;3 0.001197 158.3 By MS/MS By matching 5 0 3 2 1 1279700 1265500 14193 8013 1803 8276 19799;19800;19801 15903;15904 15904 2 12693 11919 LENNENKPVTNSR IFVKDVPNSQLRHIRLENNENKPVTNSRDT IRLENNENKPVTNSRDTQEVPLEKAKQVLK R L E S R D 0 1 4 0 0 0 2 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1513.7485 Q9Y5A9 Q9Y5A9 515 527 YTHDF2 YTH domain-containing family protein 2 yes yes 2 4.3099E-17 216.91 By MS/MS 5 0 1 1 0 0 0 8014 2908 8277 19802 15905 15905 1 0 0 LENSPLGEALR GKLSYVKTCQEKFKKLENSPLGEALRSGQA KFKKLENSPLGEALRSGQARRSSPPGHYYQ K L E L R S 1 1 1 0 0 0 2 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 11 0 1197.6354 Q9NX40 Q9NX40 105 115 OCIAD1 OCIA domain-containing protein 1 yes yes 2 0.00077737 126.03 By MS/MS 7 0 1 1 1150000 1150000 0 8015 2618 8278 19803 15906 15906 1 18053 0 LENTFCCQQK KVNENKYENVDLLCKLENTFCCQQKERREE DLLCKLENTFCCQQKERREEEDIEEKKSIK K L E Q K E 0 0 1 0 2 2 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1326.5697 Q9NSV4 Q9NSV4 682 691 DIAPH3 Protein diaphanous homolog 3 yes yes 2 7.5662E-05 155.58 By MS/MS 3 0 1 1 282930 282930 0 8016 2573 8279 19804 15907 15907 1 5176.9 0 LENYPIPEPGPNEVLLR PNNLSLVVHGPGDLRLENYPIPEPGPNEVL NYPIPEPGPNEVLLRMHSVGICGSDVHYWE R L E L R M 0 1 2 0 0 0 3 1 0 1 3 0 0 0 4 0 0 0 1 1 0 0 17 0 1949.0258 Q00796 Q00796 22 38 SORD Sorbitol dehydrogenase yes yes 2 0.00035385 170.26 By MS/MS 7 0 1 1 633500 633500 0 8017 1263 8280 19805 15908 15908 1 9944.8 0 LEQDEYALR GHSADRLAAAFAVSRLEQDEYALRSHSLAK AFAVSRLEQDEYALRSHSLAKKAQDEGLLS R L E L R S 1 1 0 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 9 0 1135.551 P55084 P55084 239 247 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 7.9712E-06 169.65 By MS/MS By MS/MS 6.8 0.748 2 2 1 3 2 29982000 29716000 266530 8018 1055 8281 19806;19807;19808;19809;19810 15909;15910;15911;15912;15913 15909 5 303460 357190 LEQEEQQR LEDDPLAAFKQRQSRLEQEEQQRLAELSKS FKQRQSRLEQEEQQRLAELSKSNKQNLFLG R L E Q R L 0 1 0 0 0 3 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1058.4993 Q3ZCQ8 Q3ZCQ8 318 325 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 2.6466E-06 190.26 By MS/MS 8.5 1.5 1 1 2 19701000 19701000 0 8019 1580 8282 19811;19812 15914;15915 15915 2 384580 0 LEQEEQQRLAELSK LEDDPLAAFKQRQSRLEQEEQQRLAELSKS RLEQEEQQRLAELSKSNKQNLFLGSLTSRL R L E S K S 1 1 0 0 0 3 4 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 14 1 1699.8741 Q3ZCQ8 Q3ZCQ8 318 331 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 1.5897E-06 209.67 By MS/MS 7.5 0.5 1 1 2 2846000 2846000 0 8020 1580 8283 19813;19814 15916 15916 1 44062 0 LEQEHTNR EIENLEKQQKQTIERLEQEHTNRLRDEAKR QKQTIERLEQEHTNRLRDEAKRIKGEQEKE R L E N R L 0 1 1 0 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 1025.489 Q9H2G2 Q9H2G2 892 899 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0031084 134.26 By MS/MS 2 0 1 1 246880 246880 0 8021 2429 8284 19815 15917 15917 1 83506 0 LEQEIATYR QQNQEYKILLDVKTRLEQEIATYRRLLEGE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF R L E Y R R 1 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1121.5717 CON__P13646-1;CON__Q8N1A0;Q8N1A0;P13646;CON__ENSEMBL:ENSP00000377550;CON__Q04695;Q04695;CON__P35900;CON__Q9D312;P35900;CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 408 416 KRT222;KRT13;KRT17;KRT20;KRT14;KRT16 Keratin-like protein KRT222;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.00031539 157.66 By MS/MS By MS/MS 5.18 2.59 1 1 1 2 1 1 2 1 1 2 9 7004500 2597900 4406700 + 8022 39;47;57;603;51 8285 19816;19817;19818;19819;19820;19821;19822;19823;19824;19825;19826 15918;15919;15920;15921;15922;15923;15924;15925;15926;15927 15920 10 223450 1995100 LEQEIATYRR QQNQEYKILLDVKTRLEQEIATYRRLLEGE DVKTRLEQEIATYRRLLEGEDAHLSSSQFS R L E R R L 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 1 1277.6728 CON__Q04695;Q04695;CON__P35900;CON__Q9D312;P35900;CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 408 417 KRT17;KRT20;KRT14;KRT16 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.01175 109.11 By MS/MS 4 0 1 1 633310 633310 0 + 8023 39;47;57 8286 19827 15928 15928 1 59599 0 LEQELFSGGNTGINFEK SDEDDWSKPLPPSERLEQELFSGGNTGINF QELFSGGNTGINFEKYDDIPVEATGNNCPP R L E E K Y 0 0 2 0 0 1 3 3 0 1 2 1 0 2 0 1 1 0 0 0 0 0 17 0 1881.9109 O00571;O15523 O00571 146 162 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.0409E-57 398.8 By MS/MS By matching 5 0 2 1 1 7386200 7333000 53179 8024 116 8287 19828;19829 15929 15929 1 73546 44659 LEQGYELQFR LLLNEMEKLEKTLFRLEQGYELQFRLGPTL KTLFRLEQGYELQFRLGPTLQGKAVTVYTN R L E F R L 0 1 0 0 0 2 2 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 10 0 1281.6354 P35573 P35573 25 34 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.010549 93.096 By MS/MS 3 0 1 1 200850 200850 0 8025 823 8288 19830 15930 15930 1 3674.9 0 LEQIKKTELGAK LQEHEQIKKKTVRERLEQIKKTELGAKAFK RERLEQIKKTELGAKAFKDIDIEDLEELDP R L E A K A 1 0 0 0 0 1 2 1 0 1 2 3 0 0 0 0 1 0 0 0 0 0 12 2 1356.7977 Q14152 Q14152 640 651 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3;4 5.9481E-05 180.66 By MS/MS By matching 3.5 0.764 4 1 1 5 1 11028000 10951000 76744 8026 1422 8289 19831;19832;19833;19834;19835;19836 15931;15932;15933 15933 3 252950 9768.4 LEQLGAQR TYEHFNAMGKYVDKRLEQLGAQRIFELGLG GKYVDKRLEQLGAQRIFELGLGDDDGNLEE R L E Q R I 1 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 913.49813 P16435 P16435 192 199 POR NADPH--cytochrome P450 reductase yes yes 2 0.0031942 133.86 By MS/MS 5 0 1 1 1802300 1802300 0 8027 634 8290 19837 15934 15934 1 18076 0 LEQLSAAELQSR AGIARELERVEQQSRLEQLSAAELQSRNQG QSRLEQLSAAELQSRNQGHWADWLQAYRAR R L E S R N 2 1 0 0 0 2 2 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 12 0 1343.7045 Q9BVL4 Q9BVL4 539 550 SELO Selenoprotein O yes yes 2 0.00013577 154.67 By MS/MS 5 0 1 1 1144000 1144000 0 8028 2335 8291 19838 15935 15935 1 11474 0 LEQSEAQLGR NADYTTGQVFDLSEKLEQSEAQLGRGSFML DLSEKLEQSEAQLGRGSFMLGLETHDRKSE K L E G R G 1 1 0 0 0 2 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1129.5728 Q92905 Q92905 273 282 COPS5 COP9 signalosome complex subunit 5 yes yes 2 0.00055002 132.32 By MS/MS 7.5 0.5 1 1 2 2304300 2304300 0 8029 2078 8292 19839;19840 15936 15936 1 35644 0 LEQSTLHVHQSQQQALR AWGALVWAATWQRRRLEQSTLHVHQSQQQA QSTLHVHQSQQQALRWCLQGAQRPHCSLRR R L E L R W 1 1 0 0 0 5 1 0 2 0 3 0 0 0 0 2 1 0 0 1 0 0 17 0 2002.0344 Q8N2G8 Q8N2G8 55 71 GHDC GH3 domain-containing protein yes yes 3 0.0062772 91.592 By MS/MS 6 0 1 1 640330 640330 0 8030 1908 8293 19841 15937 15937 1 4401.8 0 LEQVEKELLR RYATALYSAASKQNKLEQVEKELLRVAQIL SKQNKLEQVEKELLRVAQILKEPKVAASVL K L E L R V 0 1 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 1 1255.7136 P48047 P48047 55 64 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 0.00094386 147.74 By MS/MS 9 0.707 1 2 1 4 14243000 14243000 0 8031 932 8294 19842;19843;19844;19845 15938;15939;15940 15939 3 277830 0 LERYDECLAVYR QTDKLKELYGQVLYRLERYDECLAVYRDLV LYRLERYDECLAVYRDLVRNSQDDYDEERK R L E Y R D 1 2 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 0 2 1 0 0 12 1 1585.7559 O76094 O76094 122 133 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.015534 137.01 By MS/MS 5 0 1 1 1519300 1519300 0 8032 362 8295 19846 15941 15941 1 15238 0 LESAGLGYR ACNPYRKHSEEMICRLESAGLGYRVSMEET EEMICRLESAGLGYRVSMEETADRLGSIPL R L E Y R V 1 1 0 0 0 0 1 2 0 0 2 0 0 0 0 1 0 0 1 0 0 0 9 0 964.49779 Q63HN8 Q63HN8 2538 2546 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.039741 98.523 By MS/MS 1 0 1 1 145900 145900 0 8033 1664 8296 19847 15942 15942 0 35157 0 LESDYEILER RLLILMEARLSALYKLESDYEILERFPGAY SALYKLESDYEILERFPGAYLKGKKYRPLF K L E E R F 0 1 0 1 0 0 3 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 10 0 1265.6139 P41252 P41252 269 278 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 5.7598E-11 220.39 By MS/MS By matching 3.33 0.471 2 1 2 1 3972000 3930400 41568 8034 871 8297 19848;19849;19850 15943;15944 15943 2 129940 5291 LESEEEGVPSTAIR RHKTTGQVVAMKKIRLESEEEGVPSTAIRE RLESEEEGVPSTAIREISLLKELRHPNIVS R L E I R E 1 1 0 0 0 0 4 1 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1515.7417 P06493 P06493 37 50 CDK1 Cyclin-dependent kinase 1 yes yes 2 2.169E-05 196.67 By MS/MS By matching 8 0 2 1 1 4894500 4819500 74993 8035 496 8298 19851;19852 15945 15945 1 60845 101200 LESEGSPETLTNLR MELRAKEEERLNKLRLESEGSPETLTNLRK RLESEGSPETLTNLRKGYLFMYNLVQFLGF R L E L R K 0 1 1 0 0 0 3 1 0 0 3 0 0 0 1 2 2 0 0 0 0 0 14 0 1544.7682 Q9P035 Q9P035 133 146 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 2.292E-43 316.34 By MS/MS By MS/MS 2.33 1.37 2 2 1 1 4 2 10156000 10010000 145960 8036 2661 8299 19853;19854;19855;19856;19857;19858 15946;15947;15948;15949;15950;15951 15949 5 2376600 177120 LESEGSPETLTNLRK MELRAKEEERLNKLRLESEGSPETLTNLRK LESEGSPETLTNLRKGYLFMYNLVQFLGFS R L E R K G 0 1 1 0 0 0 3 1 0 0 3 1 0 0 1 2 2 0 0 0 0 0 15 1 1672.8632 Q9P035 Q9P035 133 147 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2;3 3.2664E-07 218.94 By MS/MS 1.8 0.748 2 2 1 5 4905700 4905700 0 8037 2661 8300 19859;19860;19861;19862;19863 15952;15953 15953 2 1167700 0 LESELANFGPR TKTRHLALNLQEKSKLESELANFGPRINDI EKSKLESELANFGPRINDIKRIIQSREREM K L E P R I 1 1 1 0 0 0 2 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1231.6197 Q14683 Q14683 737 747 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 1.4124E-06 185.61 By MS/MS 3.5 0.5 1 1 2 553600 553600 0 8038 1451 8301 19864;19865 15954 15954 1 19344 0 LESLILK VIGENRQVSQDLMQKLESLILKYIDLINLE VSQDLMQKLESLILKYIDLINLEEVGTICL K L E L K Y 0 0 0 0 0 0 1 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 7 0 814.51641 Q7L8L6 Q7L8L6 302 308 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.022145 110.63 By MS/MS 5 0 1 1 835220 835220 0 8039 1771 8302 19866 15955 15955 1 8376.9 0 LESLNIQR RILARRQTIEERKERLESLNIQREKEELEQ IEERKERLESLNIQREKEELEQREAELQKV R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.3567E-14 227.71 By MS/MS By matching 3.11 1.52 1 3 2 1 1 1 8 1 121270000 121170000 102780 8040 1422 8303 19867;19868;19869;19870;19871;19872;19873;19874;19875 15956;15957;15958;15959;15960;15961 15958 6 3852600 145360 LESPTVSTLTPSSPGK ISPAALKKTLLDRVKLESPTVSTLTPSSPG ESPTVSTLTPSSPGKLLTRSLALGGKKD__ K L E G K L 0 0 0 0 0 0 1 1 0 0 2 1 0 0 3 4 3 0 0 1 0 0 16 0 1599.8356 Q96C36 Q96C36 292 307 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 1.409E-05 182.23 By MS/MS By MS/MS 8.25 1.09 1 2 1 3 1 12388000 12288000 99256 8041 2120 8304 19876;19877;19878;19879 15962;15963;15964;15965;15966 15963 5 173650 133940 LESTLNYGMER SEDGTVRIWHSSTYRLESTLNYGMERVWCV STYRLESTLNYGMERVWCVASLRGSNNVAL R L E E R V 0 1 1 0 0 0 2 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 11 0 1311.6129 P35606 P35606 263 273 COPB2 Coatomer subunit beta yes yes 2 0.00088116 123.96 By MS/MS 1.33 0.471 2 1 3 1154500 1154500 0 8042 826 8305;8306 19880;19881;19882 15967;15968;15969 15969 417 3 330680 0 LETADAPAR LRKQKHGHRRYFVLKLETADAPARLEYYEN RYFVLKLETADAPARLEYYENARKFRHSVR K L E A R L 3 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 9 0 942.47706 O14654 O14654 100 108 IRS4 Insulin receptor substrate 4 yes yes 2 0.0053733 101.72 By MS/MS 2.5 1.12 1 1 1 1 4 1615100 1615100 0 8043 129 8307 19883;19884;19885;19886 15970 15970 1 99797 0 LETFTPEDIVALYR CVTLELIINQLQGEKLETFTPEDIVALYRI KLETFTPEDIVALYRILQACTEKVDEHQTF K L E Y R I 1 1 0 1 0 0 2 0 0 1 2 0 0 1 1 0 2 0 1 1 0 0 14 0 1665.8614 Q14CZ7 Q14CZ7 248 261 FASTKD3 FAST kinase domain-containing protein 3 yes yes 2 0.014261 88.056 By MS/MS 6 0 1 1 119290 119290 0 8044 1467 8308 19887 15971 15971 1 820.04 0 LETHLETIR YMVHLLELAVTFIERLETHLETIRNIPHLA VTFIERLETHLETIRNIPHLAANLKKMNQA R L E I R N 0 1 0 0 0 0 2 0 1 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1110.6033 Q9NVX0 Q9NVX0 146 154 HAUS2 HAUS augmin-like complex subunit 2 yes yes 3 0.04167 76.478 By MS/MS 6.5 0.5 1 1 2 8358300 8358300 0 8045 2606 8309 19888;19889 15972 15972 1 60034 0 LETKYPVVSDGKR QVVFSAEELIYPDRRLETKYPVVSDGKRFL RRLETKYPVVSDGKRFLGSGGFIGYAPNLS R L E K R F 0 1 0 1 0 0 1 1 0 0 1 2 0 0 1 1 1 0 1 2 0 0 13 2 1490.8093 Q02809 Q02809 138 150 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 3 0.013933 86.944 By MS/MS 5 0 1 1 442530 442530 0 8046 1280 8310 19890 15973 15973 1 4438.4 0 LETVGSIFSR ______________________________ MAGSRLETVGSIFSRTRDLVRAGVLKEKPL R L E S R T 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 2 1 0 0 1 0 0 10 0 1107.5924 Q9Y3D9 Q9Y3D9 6 15 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 7.5662E-05 155.58 By MS/MS By MS/MS 9.25 0.433 3 1 3 1 17314000 17258000 56165 8047 2875 8311 19891;19892;19893;19894 15974;15975;15976;15977 15977 4 346340 128070 LETYENAR ECCPTSVELWLALARLETYENARKVLNKAR LWLALARLETYENARKVLNKARENIPTDRH R L E A R K 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 8 0 994.47197 O94906 O94906 443 450 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.010564 110.12 By MS/MS 4 0.816 1 1 1 3 2645500 2645500 0 8048 376 8312 19895;19896;19897 15978;15979 15979 2 212940 0 LEVAPISDIIAIK ASAFGKNLLPRVAAKLEVAPISDIIAIKSP AKLEVAPISDIIAIKSPDTFVRTIYAGNAL K L E I K S 2 0 0 1 0 0 1 0 0 4 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1380.8228 P13804 P13804 127 139 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.00028566 133.42 By MS/MS 8 0 1 1 749920 749920 0 8049 606 8313 19898 15980;15981 15981 2 9467.6 0 LEVDIPLVK NFMQAFLNVLDQCPKLEVDIPLVKSYLAQF LDQCPKLEVDIPLVKSYLAQFAARAIISEL K L E V K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 2 0 0 9 0 1024.6168 P78344 P78344 632 640 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00096326 134.48 By MS/MS 4.5 0.5 1 1 2 10362000 10362000 0 8050 1219 8314 19899;19900 15982;15983 15982 2 855460 0 LEVEREAEK MKAVQADQERERQRRLEVEREAEKKREAKQ RERQRRLEVEREAEKKREAKQRAKEAQERE R L E E K K 1 1 0 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1101.5666 Q96AG4 Q96AG4 163 171 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.010273 120.31 By MS/MS 7 0 1 1 2393600 2393600 0 8051 2107 8315 19901 15984 15984 1 37575 0 LEVIFADLAR SMALPSGQVCHDQQRLEVIFADLARRKDDA HDQQRLEVIFADLARRKDDAQQRSWALYED R L E A R R 2 1 0 1 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 10 0 1145.6445 Q9NZQ3 Q9NZQ3 382 391 NCKIPSD NCK-interacting protein with SH3 domain yes yes 2 1.5966E-07 185.81 By MS/MS 5 0 1 1 361420 361420 0 8052 2654 8316 19902 15985 15985 1 3624.8 0 LEVNLQAMK ELEDELQATEDAKLRLEVNLQAMKAQFERD EDAKLRLEVNLQAMKAQFERDLQGRDEQSE R L E M K A 1 0 1 0 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 1044.5638 P35579 P35579 1558 1566 MYH9 Myosin-9 yes yes 2 0.01095 109.48 By MS/MS 2 0 1 1 0 0 0 8053 824 8317 19903 15986 15986 1 0 0 LEVSPEAQPTAR ISSPRAPQTRAVKPRLEVSPEAQPTARLPS KPRLEVSPEAQPTARLPSPTDSPSSLPPLP R L E A R L 2 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 12 0 1296.6674 Q6WKZ4 Q6WKZ4 542 553 RAB11FIP1 Rab11 family-interacting protein 1 yes yes 2 0.02693 70.942 By MS/MS 2.5 0.5 1 1 2 455210 455210 0 8054 1735 8318 19904;19905 15987 15987 1 120670 0 LEWVQDNIR RSSAPTARVFMKSVKLEWVQDNIRAAQDLC FMKSVKLEWVQDNIRAAQDLCEEALRHYED K L E I R A 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 9 0 1171.5986 O94906 O94906 684 692 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.01533 91.087 By MS/MS 4 0 1 1 688030 688030 0 8055 376 8319 19906 15988 15988 1 64748 0 LEYCEALAMLR QFPCEPFKFLEPTLRLEYCEALAMLREAGV PTLRLEYCEALAMLREAGVEMGDEDDLSTP R L E L R E 2 1 0 0 1 0 2 0 0 0 3 0 1 0 0 0 0 0 1 0 0 0 11 0 1367.6577 P14868 P14868 346 356 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 1.38E-05 169.65 By MS/MS 6 0 2 2 2358200 2358200 0 8056 620 8320;8321 19907;19908 15989;15990 15989 292 2 16211 0 LEYLQIPPVSR ______________________________ QSLRLEYLQIPPVSRAYTTACVLTTAAVQL R L E S R A 0 1 0 0 0 1 1 0 0 1 2 0 0 0 2 1 0 0 1 1 0 0 11 0 1313.7343 Q9GZP9 Q9GZP9 8 18 DERL2 Derlin-2 yes yes 2 0.001166 118.28 By MS/MS 1.5 0.5 1 1 2 109150 109150 0 8057 2396 8322 19909;19910 15991 15991 1 32025 0 LEYYENAR RYFVLKLETADAPARLEYYENARKFRHSVR TADAPARLEYYENARKFRHSVRAAAAAAAA R L E A R K 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 8 0 1056.4876 O14654 O14654 109 116 IRS4 Insulin receptor substrate 4 yes yes 2 0.027723 91.069 By MS/MS 4 0.816 1 1 1 3 1523900 1523900 0 8058 129 8323 19911;19912;19913 15992 15992 1 41244 0 LFADAEEEQR ILNKYVGESEANIRKLFADAEEEQRRLGAN ANIRKLFADAEEEQRRLGANSGLHIIIFDE K L F Q R R 2 1 0 1 0 1 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 10 0 1206.5517 P46459 P46459 305 314 NSF Vesicle-fusing ATPase yes yes 2 0.0011078 136.63 By MS/MS 5 0 1 1 0 0 0 8059 912 8324 19914 15993 15993 1 0 0 LFAIEEETTTR EFEVLKKLNHKNIVKLFAIEEETTTRHKVL NIVKLFAIEEETTTRHKVLIMEFCPCGSLY K L F T R H 1 1 0 0 0 0 3 0 0 1 1 0 0 1 0 0 3 0 0 0 0 0 11 0 1308.6561 Q9UHD2 Q9UHD2 70 80 TBK1 Serine/threonine-protein kinase TBK1 yes yes 2 1.4132E-06 185.6 By MS/MS 4.5 0.5 1 1 2 1789400 1789400 0 8060 2729 8325 19915;19916 15994;15995 15995 2 104890 0 LFAVVHFASR VKKVNEMIVTGQYGRLFAVVHFASRQWKVT GQYGRLFAVVHFASRQWKVTSEDLILIGNE R L F S R Q 2 1 0 0 0 0 0 0 1 0 1 0 0 2 0 1 0 0 0 2 0 0 10 0 1145.6346 Q7Z2W9 Q7Z2W9 95 104 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 2.6928E-05 137.14 By MS/MS 9 0 1 1 368630 368630 0 8061 1779 8326 19917 15996 15996 1 7254.8 0 LFCVGFTK EAHVDVKTTDGYLLRLFCVGFTKKRNNQIR TDGYLLRLFCVGFTKKRNNQIRKTSYAQHQ R L F T K K 0 0 0 0 1 0 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 8 0 970.49462 P61247 P61247 137 144 RPS3A 40S ribosomal protein S3a yes yes 2 0.0026236 137.18 By MS/MS 8 0.816 1 1 1 3 24134000 24134000 0 8062 1118 8327 19918;19919;19920 15997;15998 15998 2 311990 0 LFDAPEAPLPSR NLDDYLHLLLPPIVKLFDAPEAPLPSRKAA IVKLFDAPEAPLPSRKAALETVDRLTESLD K L F S R K 2 1 0 1 0 0 1 0 0 0 2 0 0 1 3 1 0 0 0 0 0 0 12 0 1311.6823 P42345 P42345 1121 1132 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00033187 141.89 By MS/MS 2.5 1.12 1 1 1 1 4 2087600 2087600 0 8063 879 8328 19921;19922;19923;19924 15999;16000;16001 16000 3 526420 0 LFDDKLQNCKEDEQR TEADAYLQILIEQLKLFDDKLQNCKEDEQR LFDDKLQNCKEDEQRKKIETLKETTNSMVE K L F Q R K 0 1 1 3 1 2 2 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 15 2 1936.8949 Q96SU4 Q96SU4 139 153 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 3 0.0058223 98.253 By MS/MS 4.5 0.5 1 1 2 832710 832710 0 8064 2236 8329 19925;19926 16002 16002 1 63915 0 LFDDVPQVR NGKSVDDVLSHFAQRLFDDVPQVRRAVASV SHFAQRLFDDVPQVRRAVASVVGGWLLCLR R L F V R R 0 1 0 2 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 9 0 1087.5662 Q86Y56 Q86Y56 254 262 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.013499 94.302 By MS/MS 4.5 0.5 1 1 2 5243300 5243300 0 8065 1850 8330 19927;19928 16003;16004 16004 2 424130 0 LFDFVNAK TQYTFSSIEREEYGKLFDFVNAKKLNIKNR EREEYGKLFDFVNAKKLNIKNRGLKEGMNP K L F A K K 1 0 1 1 0 0 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 952.50182 Q08945 Q08945 414 421 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.038568 86.833 By MS/MS 5 0.816 1 1 1 3 1033000 1033000 0 8066 1313 8331 19929;19930;19931 16005 16005 1 20869 0 LFDNTVGAYR FYFLLDKTGHFPNTKLFDNTVGAYRSL___ FPNTKLFDNTVGAYRSL_____________ K L F Y R S 1 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 10 0 1154.572 A0PJW6 A0PJW6 191 200 TMEM223 Transmembrane protein 223 yes yes 2 9.5204E-08 192.91 By MS/MS 9.5 0.5 1 1 2 4257800 4257800 0 8067 7 8332 19932;19933 16006;16007;16008 16006 3 103510 0 LFDQPGDPLK IGIEPSLATYHHIIRLFDQPGDPLKRSSFI HHIIRLFDQPGDPLKRSSFIIYDIMNELMG R L F L K R 0 0 0 2 0 1 0 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 10 0 1128.5815 Q96EY7 Q96EY7 378 387 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.011694 90.827 By MS/MS By matching 5 0 2 1 1 1541300 1514400 26905 8068 2151 8333 19934;19935 16009 16009 1 15188 22594 LFDQPGDPLKR IGIEPSLATYHHIIRLFDQPGDPLKRSSFI HIIRLFDQPGDPLKRSSFIIYDIMNELMGK R L F K R S 0 1 0 2 0 1 0 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 11 1 1284.6826 Q96EY7 Q96EY7 378 388 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2;3 0.0029411 117.71 By MS/MS 5 0 2 2 13435000 13435000 0 8069 2151 8334 19936;19937 16010;16011 16011 2 134740 0 LFDSTTLEHQK DMTMFVTASKDNTAKLFDSTTLEHQKTFRT NTAKLFDSTTLEHQKTFRTERPVNSAALSP K L F Q K T 0 0 0 1 0 1 1 0 1 0 2 1 0 1 0 1 2 0 0 0 0 0 11 0 1317.6565 Q13347 Q13347 214 224 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 1.3488E-06 186.41 By MS/MS By MS/MS 8 1.15 3 1 1 1 5 1 122050000 121940000 106770 8070 1372 8335 19938;19939;19940;19941;19942;19943 16012;16013;16014;16015;16016;16017 16017 6 1903000 192290 LFDTPQAK PQIYWFCLLCRKAVRLFDTPQAKKDG____ LCRKAVRLFDTPQAKKDG____________ R L F A K K 1 0 0 1 0 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 8 0 918.48108 Q8TBR7 Q8TBR7 247 254 FAM57A Protein FAM57A yes yes 2 0.02311 96.19 By MS/MS 2 0.816 1 1 1 3 1297400 1297400 0 8071 1985 8336 19944;19945;19946 16018;16019 16019 2 296190 0 LFDWANTSR DVAPMGREGVTAMHKLFDWANTSRRGLLLF VTAMHKLFDWANTSRRGLLLFMDEADAFLR K L F S R R 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 9 0 1108.5302 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 395 403 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2 0.00071472 140.11 By MS/MS 6.5 1.12 1 1 1 1 4 15016000 15016000 0 8072 2598;1638 8337 19947;19948;19949;19950 16020 16020 1 147390 0 LFEAEAQDLFR GSFWAQPLQNTDNRRLFEAEAQDLFRDIQS DNRRLFEAEAQDLFRDIQSLPQKAAVRKLN R L F F R D 2 1 0 1 0 1 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 11 0 1337.6616 Q9H223 Q9H223 273 283 EHD4 EH domain-containing protein 4 yes yes 2 4.5049E-09 206.73 By MS/MS 5 0 1 1 509450 509450 0 8073 2425 8338 19951 16021 16021 1 5109.6 0 LFEAQGKPELK EIEKLRKQLKVKVNRLFEAQGKPELKGFNL KVNRLFEAQGKPELKGFNLNPLNQDELKAL R L F L K G 1 0 0 0 0 1 2 1 0 0 2 2 0 1 1 0 0 0 0 0 0 0 11 1 1258.6921 Q9NUG6 Q9NUG6 102 112 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 2 0.0012215 137.95 By MS/MS 10 0 1 1 227440 227440 0 8074 2581 8339 19952 16022 16022 1 12258 0 LFEDTKYTTLIAK HDVLLSNEEDRKVGKLFEDTKYTTLIAKLK GKLFEDTKYTTLIAKLKSDGIPMYKRNVMI K L F A K L 1 0 0 1 0 0 1 0 0 1 2 2 0 1 0 0 3 0 1 0 0 0 13 1 1541.8341 Q9UGI8 Q9UGI8 66 78 TES Testin yes yes 2;3 0.00185 147.58 By MS/MS 7 0 2 2 1779600 1779600 0 8075 2720 8340 19953;19954 16023;16024 16024 2 27936 0 LFEFAGYDVLR VGHLRSTIIGESISRLFEFAGYDVLRLNHV SISRLFEFAGYDVLRLNHVGDWGTQFGMLI R L F L R L 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 0 0 0 1 1 0 0 11 0 1328.6765 P54136 P54136 224 234 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00011752 150.35 By MS/MS 6 0.816 1 1 1 3 1318000 1318000 0 8076 1043 8341 19955;19956;19957 16025;16026;16027 16026 2 12739 0 LFEGNALLR AARELLTLDEKDPRRLFEGNALLRRLVRIG EKDPRRLFEGNALLRRLVRIGVLDEGKMKL R L F L R R 1 1 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1031.5764 P46781 P46781 71 79 RPS9 40S ribosomal protein S9 yes yes 2 3.3487E-06 180.87 By MS/MS By MS/MS 8.11 1.37 2 1 1 4 1 7 2 22186000 21892000 294310 8077 918 8342 19958;19959;19960;19961;19962;19963;19964;19965;19966 16028;16029;16030;16031;16032;16033;16034 16032 7 245300 576670 LFEGNALLRR AARELLTLDEKDPRRLFEGNALLRRLVRIG KDPRRLFEGNALLRRLVRIGVLDEGKMKLD R L F R R L 1 2 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 10 1 1187.6775 P46781 P46781 71 80 RPS9 40S ribosomal protein S9 yes yes 2 0.0041061 93.429 By MS/MS 8.5 0.5 1 1 2 11730000 11730000 0 8078 918 8343 19967;19968 16035 16035 1 224720 0 LFEISDIVIK LKTIAANRKMPLPLKLFEISDIVIKDSNTD PLPLKLFEISDIVIKDSNTDVGAKNYRHLC K L F I K D 0 0 0 1 0 0 1 0 0 3 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1175.6802 Q9NSD9 Q9NSD9 474 483 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 9.1783E-05 154.49 By MS/MS 5 0 1 1 129920 129920 0 8079 2569 8344 19969 16036 16036 1 1303 0 LFENYIELK ITQVSMASLKELDQRLFENYIELKADPIVG KELDQRLFENYIELKADPIVGSLEPGIYAG R L F L K A 0 0 1 0 0 0 2 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1167.6176 Q96KP1 Q96KP1 759 767 EXOC2 Exocyst complex component 2 yes yes 2 9.6162E-05 162.88 By MS/MS 4 0 1 1 1166000 1166000 0 8080 2189 8345 19970 16037;16038 16037 2 109720 0 LFEPLVIK TKNRADKNAIHNHIRLFEPLVIKALKQYTT AIHNHIRLFEPLVIKALKQYTTTTCVQLQK R L F I K A 0 0 0 0 0 0 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 8 0 957.5899 P42858 P42858 1424 1431 HTT Huntingtin yes yes 2 0.024487 94.662 By MS/MS 1.5 0.5 1 1 2 336150 336150 0 8081 890 8346 19971;19972 16039;16040 16039 2 100620 0 LFEQNVQR PLNKEAAEVLQNNRRLFEQNVQRSMRGGYI VLQNNRRLFEQNVQRSMRGGYIGSTYFERC R L F Q R S 0 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 1032.5352 P61081 P61081 159 166 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.00027278 166.78 By MS/MS By matching 9.33 0.471 2 1 2 1 6237200 6204700 32552 8082 1108 8347 19973;19974;19975 16041;16042 16041 2 152170 74229 LFEVIETEK EVRIMKVLNHPNIVKLFEVIETEKTLYLVM HPNIVKLFEVIETEKTLYLVMEYASGGEVF K L F E K T 0 0 0 0 0 0 3 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 9 0 1106.5859 Q7KZI7;P27448;Q9P0L2;Q96L34 Q7KZI7 115 123 MARK2;MARK3;MARK1;MARK4 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1;MAP/microtubule affinity-regulating kinase 4 no no 2 0.012803 97.635 By MS/MS 5 0 1 1 928560 928560 0 8083 1756;2191 8348 19976 16043 16043 1 9312.9 0 LFFLQVK PEDVAEELIQDITQKLFFLQVKEGILSDEI LIQDITQKLFFLQVKEGILSDEIYCPPETA K L F V K E 0 0 0 0 0 1 0 0 0 0 2 1 0 2 0 0 0 0 0 1 0 0 7 0 893.53747 P15311 P15311 101 107 EZR Ezrin no no 2 0.014267 124.32 By MS/MS 5 0 1 1 349320 349320 0 8084 624 8349 19977 16044 16044 1 3503.5 0 LFFPVIYDVK SNLPEEELDFFEILRLFFPVIYDVKYLMKS FEILRLFFPVIYDVKYLMKSCKNLKGGLQE R L F V K Y 0 0 0 1 0 0 0 0 0 1 1 1 0 2 1 0 0 0 1 2 0 0 10 0 1239.6903 Q9UIV1 Q9UIV1 187 196 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 2 0.00061501 131.06 By MS/MS 8 0 1 1 66295 66295 0 8085 2744 8350 19978 16045 16045 1 836.97 0 LFFWMQEPK SGRVYVLKFKAGSKRLFFWMQEPKTDQDEE KAGSKRLFFWMQEPKTDQDEEHCRKVNEYL R L F P K T 0 0 0 0 0 1 1 0 0 0 1 1 1 2 1 0 0 1 0 0 0 0 9 0 1224.6002 Q16186 Q16186 105 113 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.0015466 126.41 By MS/MS 7 0 1 1 104380 104380 0 8086 1543 8351 19979 16046 16046 874 1 1638.6 0 LFGAPEPSTIAR PPRFQQVPTDALANKLFGAPEPSTIARSLP ANKLFGAPEPSTIARSLPTTVPESPNYRNT K L F A R S 2 1 0 0 0 0 1 1 0 1 1 0 0 1 2 1 1 0 0 0 0 0 12 0 1257.6717 Q6PKG0 Q6PKG0 754 765 LARP1 La-related protein 1 yes yes 2 0.0053987 89.029 By MS/MS 3.5 0.5 1 1 2 2425300 2425300 0 8087 1722 8352 19980;19981 16047 16047 1 110490 0 LFGEVTRPTNSK SLSEYAFRMSRLSARLFGEVTRPTNSKSMK SARLFGEVTRPTNSKSMKVVKLFSELPLAK R L F S K S 0 1 1 0 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 1 0 0 12 1 1347.7147 Q9Y291 Q9Y291 18 29 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 5.438E-05 178.46 By MS/MS 10 0 1 1 1239800 1239800 0 8088 2821 8353 19982 16048 16048 1 66818 0 LFGLASAAVDR EVIDCVQELSHSVNKLFGLASAAVDRCVRF SVNKLFGLASAAVDRCVRFTNGLGTCGLLS K L F D R C 3 1 0 1 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1118.6084 P83436 P83436 398 408 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 2 0.038416 79.986 By MS/MS 4 0.816 1 1 1 3 1478100 1478100 0 8089 1240 8354 19983;19984;19985 16049;16050 16050 0 69445 0 LFGLLVK AFSVGQQLVFSFNEKLFGLLVKDIEAMDPS LVFSFNEKLFGLLVKDIEAMDPSILKGEPA K L F V K D 0 0 0 0 0 0 0 1 0 0 3 1 0 1 0 0 0 0 0 1 0 0 7 0 788.51601 P46459 P46459 144 150 NSF Vesicle-fusing ATPase yes yes 2 0.017982 114.67 By MS/MS 5 0 1 1 835090 835090 0 8090 912 8355 19986 16051 16051 1 8375.6 0 LFGTTVTFK FWNDSFARLSLTYERLFGTTVTFKFILANR SLTYERLFGTTVTFKFILANRLYPVSARHW R L F F K F 0 0 0 0 0 0 0 1 0 0 1 1 0 2 0 0 3 0 0 1 0 0 9 0 1012.5593 Q15904 Q15904 316 324 ATP6AP1 V-type proton ATPase subunit S1 yes yes 2 0.015442 103.83 By MS/MS 7 0 1 1 413550 413550 0 8091 1539 8356 19987 16052 16052 1 6491.9 0 LFHNTPGHR ITGRFLASCGDRAVRLFHNTPGHRAMVEEM GDRAVRLFHNTPGHRAMVEEMQGHLKRASN R L F H R A 0 1 1 0 0 0 0 1 2 0 1 0 0 1 1 0 1 0 0 0 0 0 9 0 1077.5468 Q9Y4P3 Q9Y4P3 398 406 TBL2 Transducin beta-like protein 2 yes yes 3 0.011624 104.2 By MS/MS 7 0 1 1 1608100 1608100 0 8092 2899 8357 19988 16053 16053 1 25244 0 LFIFETFCR FFLVACLEDFIENARLFIFETFCRIHQCIS FIENARLFIFETFCRIHQCISINMLADKLN R L F C R I 0 1 0 0 1 0 1 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 9 0 1231.606 P60228 P60228 338 346 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 2.651E-10 203.93 By MS/MS 6.5 0.5 1 1 2 2851900 2851900 0 8093 1090 8358 19989;19990 16054;16055 16054 2 20589 0 LFIGGLNTETNEK ______________________________ GKLFIGGLNTETNEKALEAVFGKYGRIVEV K L F E K A 0 0 2 0 0 0 2 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 13 0 1434.7355 P38159;Q96E39 P38159 10 22 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.0010054 126.03 By MS/MS 7 0 1 1 1970100 1970100 0 8094 848 8359 19991 16056 16056 1 30927 0 LFIVESNSSSSTR KINPDEREEMKVSAKLFIVESNSSSSTRSA AKLFIVESNSSSSTRSAVDMACSVLGVAQL K L F T R S 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 5 1 0 0 1 0 0 13 0 1425.71 P48507 P48507 95 107 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 2 2.0163E-11 231.17 By MS/MS 8 0 1 1 1441700 1441700 0 8095 936 8360 19992 16057 16057 1 18202 0 LFKHNDMADLER FAIQKGLQASRSDIKLFKHNDMADLERLLK DIKLFKHNDMADLERLLKEQEIEDQKNPRK K L F E R L 1 1 1 2 0 0 1 0 1 0 2 1 1 1 0 0 0 0 0 0 0 0 12 1 1487.7191 O15269 O15269 208 219 SPTLC1 Serine palmitoyltransferase 1 yes yes 3 0.0043792 97.957 By MS/MS 6 0 1 1 984260 984260 0 8096 177 8361 19993 16058 16058 1 6766.1 0 LFKPPQPPAR QSRGEPPLPEEDLSKLFKPPQPPARMDSLL EDLSKLFKPPQPPARMDSLLIAGQINTYCQ K L F A R M 1 1 0 0 0 1 0 0 0 0 1 1 0 1 4 0 0 0 0 0 0 0 10 1 1149.6659 O15372 O15372 304 313 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 3 0.051916 83.948 By MS/MS 7.5 0.5 1 1 2 10593000 10593000 0 8097 186 8362 19994;19995 16059 16059 1 164100 0 LFLAGYDPTPTMR IMDGAPVKGESIPIRLFLAGYDPTPTMRDV IRLFLAGYDPTPTMRDVNKKFSVRYFLNLV R L F M R D 1 1 0 1 0 0 0 1 0 0 2 0 1 1 2 0 2 0 1 0 0 0 13 0 1480.7384 O75436 O75436 250 262 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.00034844 146.11 By MS/MS 7 0 1 1 1201200 1201200 0 8098 328 8363 19996 16060 16060 138 1 18857 0 LFLCVLPQDK NGQLRSSRFRSICWKLFLCVLPQDKSQWIS SICWKLFLCVLPQDKSQWISRIEELRAWYS K L F D K S 0 0 0 1 1 1 0 0 0 0 3 1 0 1 1 0 0 0 0 1 0 0 10 0 1231.6635 Q92609 Q92609 93 102 TBC1D5 TBC1 domain family member 5 yes yes 2 0.00034708 137.14 By MS/MS 4 0 1 1 215340 215340 0 8099 2062 8364 19997 16061 16061 1 20265 0 LFLELEPQVR RQELQRNVISSSSFKLFLELEPQVRDIIFK SSSFKLFLELEPQVRDIIFKFYESKYASCL K L F V R D 0 1 0 0 0 1 2 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 10 0 1242.6972 Q13098 Q13098 318 327 GPS1 COP9 signalosome complex subunit 1 yes yes 2 0.00059217 131.5 By MS/MS 5.5 0.5 1 1 2 2601300 2601300 0 8100 1352 8365 19998;19999 16062;16063 16063 2 18240 0 LFLESSDANPVR FALRYFKDTSPVFQRLFLESSDANPVRYGR FQRLFLESSDANPVRYGRRRMKLRDLMEAA R L F V R Y 1 1 1 1 0 0 1 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 12 0 1346.683 Q9NU22 Q9NU22 126 137 MDN1 Midasin yes yes 2 6.7644E-06 182.16 By MS/MS 1.5 0.5 1 1 2 1132100 1132100 0 8101 2580 8366 20000;20001 16064;16065 16064 2 335770 0 LFLFGEEPSK RHEDQLEVTREPARRLFLFGEEPSKLDQDV EPARRLFLFGEEPSKLDQDVLAALECADVD R L F S K L 0 0 0 0 0 0 2 1 0 0 2 1 0 2 1 1 0 0 0 0 0 0 10 0 1165.6019 Q86XL3 Q86XL3 824 833 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0013747 116.37 By MS/MS 4 0 1 1 262890 262890 0 8102 1845 8367 20002 16066 16066 1 24740 0 LFLLQDSGR LGPLVAAACSDGAVRLFLLQDSGRILQLLA SDGAVRLFLLQDSGRILQLLAETFHHKRCV R L F G R I 0 1 0 1 0 1 0 1 0 0 3 0 0 1 0 1 0 0 0 0 0 0 9 0 1047.5713 Q9NNW5 Q9NNW5 890 898 WDR6 WD repeat-containing protein 6 yes yes 2 0.0026052 113.62 By MS/MS 1.5 0.5 1 1 2 392430 392430 0 8103 2521 8368 20003;20004 16067;16068 16068 2 114370 0 LFLQGPK DFTATFGPLDSLNTRLFLQGPKIAEEFEVE PLDSLNTRLFLQGPKIAEEFEVELERGKTL R L F P K I 0 0 0 0 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 7 0 801.47487 P11498 P11498 1037 1043 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.041523 96.048 By MS/MS 4 0.816 1 1 1 3 1372100 1372100 0 8104 580 8369 20005;20006;20007 16069 16069 1 37205 0 LFLTMEINPK LEKKLHSLQPHACFRLFLTMEINPKVPVNL HACFRLFLTMEINPKVPVNLLRAGRIFVFE R L F P K V 0 0 1 0 0 0 1 0 0 1 2 1 1 1 1 0 1 0 0 0 0 0 10 0 1204.6526 Q14204 Q14204 4124 4133 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0010992 120.99 By MS/MS 1.5 0.5 1 1 2 471350 471350 0 8105 1433 8370 20008;20009 16070;16071 16070 832 2 133630 0 LFMAQALQEYNN YCQNIKEFTAQNLGKLFMAQALQEYNN___ LGKLFMAQALQEYNN_______________ K L F N N - 2 0 2 0 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 12 0 1440.6708 O15372 O15372 341 352 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 8.0503E-25 275.01 By MS/MS By MS/MS 6.71 2.43 1 3 2 1 6 1 12457000 12394000 63181 8106 186 8371;8372 20010;20011;20012;20013;20014;20015;20016 16072;16073;16074;16075;16076;16077 16076 97 6 217870 113790 LFNIHED IKDGEQHEDLNEVAKLFNIHED________ EDLNEVAKLFNIHED_______________ K L F E D - 0 0 1 1 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 886.41848 O95831 O95831 607 613 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.010289 134.66 By MS/MS By matching 6.67 1.49 2 1 1 1 1 5 1 38256000 38030000 225530 8107 429 8373 20017;20018;20019;20020;20021;20022 16078;16079 16078 2 367380 189400 LFNLSKEDDVR VPRRLGPKRASRIRKLFNLSKEDDVRQYVV RIRKLFNLSKEDDVRQYVVRKPLNKEGKKP K L F V R Q 0 1 1 2 0 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 11 1 1334.683 P62753 P62753 144 154 RPS6 40S ribosomal protein S6 yes yes 2 8.2953E-05 166.86 By MS/MS 8.5 0.5 1 1 2 22424000 22424000 0 8108 1169 8374 20023;20024 16080 16080 1 285110 0 LFNTAVCESK AIDSSHPWLHECMIRLFNTAVCESKDLSDT ECMIRLFNTAVCESKDLSDTVRTVLKQEMN R L F S K D 1 0 1 0 1 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 10 0 1167.5594 Q9BXJ9 Q9BXJ9 715 724 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.0013057 117.71 By MS/MS 4 0 1 1 2533200 2533200 0 8109 2357 8375 20025 16081 16081 1 238390 0 LFPFIDYMR L F M R 0 1 0 1 0 0 0 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 9 0 1200.6002 REV__Q9NVM9 yes yes 2 0.030932 83.753 By MS/MS 4 0 1 1 957880 957880 0 + 8110 2989 8376 20026 16082 16082 1229 1 90143 0 LFPGFEIETVK CRDVPLHALYDNVEKLFPGFEIETVKNNLR NVEKLFPGFEIETVKNNLRILFNNAVKKRL K L F V K N 0 0 0 0 0 0 2 1 0 1 1 1 0 2 1 0 1 0 0 1 0 0 11 0 1278.686 P08243 P08243 222 232 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.052559 68.626 By MS/MS 6 0 1 1 1245900 1245900 0 8111 523 8377 20027 16083 16083 1 8564.8 0 LFPSASATEAIQR GSSVDSAPPPGRHGRLFPSASATEAIQRHR GRLFPSASATEAIQRHRRNLAEWFSRLPRE R L F Q R H 3 1 0 0 0 1 1 0 0 1 1 0 0 1 1 2 1 0 0 0 0 0 13 0 1389.7252 Q86UT6 Q86UT6 69 81 NLRX1 NLR family member X1 yes yes 2 0.0068858 115.91 By MS/MS 4 0 1 1 1689900 1689900 0 8112 1825 8378 20028 16084 16084 1 159030 0 LFQAEDSPVDGQGR MMPDAWPCAVADMVRLFQAEDSPVDGQGRC RLFQAEDSPVDGQGRCLALLELLTVLPEEF R L F G R C 1 1 0 2 0 2 1 2 0 0 1 0 0 1 1 1 0 0 0 1 0 0 14 0 1517.711 O94829 O94829 149 162 IPO13 Importin-13 yes yes 2 0.00040838 162.93 By MS/MS 4 0 1 1 600060 600060 0 8113 370 8379 20029 16085 16085 1 56470 0 LFQFIGR GPDGRSFVIATTRQRLFQFIGRAAEGAEAQ VIATTRQRLFQFIGRAAEGAEAQGFSGLFA R L F G R A 0 1 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 0 0 0 0 0 7 0 879.49667 Q9P253 Q9P253 228 234 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 0.03081 104.11 By MS/MS 4 0 1 1 190210 190210 0 8114 2677 8380 20030 16086 16086 1 17900 0 LFQQIYSDGSDEVKR EEKNEKLEGDAALNRLFQQIYSDGSDEVKR LFQQIYSDGSDEVKRAMNKSFMESGGTVLS R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.020609 77.078 By MS/MS 7 0 1 1 1958600 1958600 0 8115 2850 8381 20031 16087 16087 1 30746 0 LFQSNDPTLR LGTTEATEAFFAMTKLFQSNDPTLRRMCYL FAMTKLFQSNDPTLRRMCYLTIKEMSCIAE K L F L R R 0 1 1 1 0 1 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 10 0 1189.6091 Q9Y678 Q9Y678 76 85 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0076735 99.568 By MS/MS 4 0 1 1 4788100 4788100 0 8116 2933 8382 20032 16088 16088 1 450590 0 LFQSNDQTLR FGTTEATEAFFAMTRLFQSNDQTLRRMCYL FAMTRLFQSNDQTLRRMCYLTIKEMATISE R L F L R R 0 1 1 1 0 2 0 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1220.6149 Q9UBF2 Q9UBF2 76 85 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00041942 134.84 By MS/MS 4.5 0.5 1 1 2 8902100 8902100 0 8117 2697 8383 20033;20034 16089;16090 16089 2 746350 0 LFQTAITR PGNDDSPLAVHLYCRLFQTAITRAKEKRQQ AVHLYCRLFQTAITRAKEKRQQVEALYRLQ R L F T R A 1 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 948.53927 Q9Y399 Q9Y399 252 259 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.00098392 138.4 By MS/MS 9 0.816 1 1 1 3 11007000 11007000 0 8118 2860 8384 20035;20036;20037 16091 16091 1 160490 0 LFQVLAPR RMADFWLTEKDLIPKLFQVLAPRYKDQTGG EKDLIPKLFQVLAPRYKDQTGGYTRMLQIP K L F P R Y 1 1 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 8 0 942.56509 Q9NRX2 Q9NRX2 89 96 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.00010192 175.75 By MS/MS 9.5 0.5 1 1 2 6882500 6882500 0 8119 2561 8385 20038;20039 16092 16092 1 148140 0 LFSADPFDLEAQAK EQQQDRARREQERIRLFSADPFDLEAQAKI RLFSADPFDLEAQAKIEEDIRQQNIEENMT R L F A K I 3 0 0 2 0 1 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 14 0 1550.7617 Q5TDH0 Q5TDH0 192 205 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0011681 122.18 By MS/MS 6.5 0.5 1 1 2 2492400 2492400 0 8120 1641 8386 20040;20041 16093;16094 16093 2 18220 0 LFSCANCDTILTNR ______________________________ RLFSCANCDTILTNRSELISTRFTGATGRA R L F N R S 1 1 2 1 2 0 0 0 0 1 2 0 0 1 0 1 2 0 0 0 0 0 14 0 1683.7709 P62699 P62699 14 27 YPEL5 Protein yippee-like 5 yes yes 2 1.2683E-08 222.72 By MS/MS 10 0 1 1 320010 320010 0 8121 1164 8387 20042 16095 16095 1 17247 0 LFSEGLFSAK RLLRRGTCAFSILFKLFSEGLFSAKLFLTA SILFKLFSEGLFSAKLFLTATLHEPIMQLL K L F A K L 1 0 0 0 0 0 1 1 0 0 2 1 0 2 0 2 0 0 0 0 0 0 10 0 1097.5757 Q14C86 Q14C86 184 193 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.011441 91.087 By MS/MS 3 0.816 1 1 1 3 291150 291150 0 8122 1466 8388 20043;20044;20045 16096;16097 16096 2 58950 0 LFSELPLAK EVTRPTNSKSMKVVKLFSELPLAKKKETYD SMKVVKLFSELPLAKKKETYDWYPNHHTYA K L F A K K 1 0 0 0 0 0 1 0 0 0 3 1 0 1 1 1 0 0 0 0 0 0 9 0 1016.5906 Q9Y291 Q9Y291 36 44 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 0.0066339 106.36 By MS/MS 10 0 1 1 1978600 1978600 0 8123 2821 8389 20046 16098;16099 16098 2 106640 0 LFSGATMASSR LDGLYRVAREEGLRRLFSGATMASSRGALV GLRRLFSGATMASSRGALVTVGQLSCYDQA R L F S R G 2 1 0 0 0 0 0 1 0 0 1 0 1 1 0 3 1 0 0 0 0 0 11 0 1126.5441 Q9UBX3 Q9UBX3 160 170 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.00019684 142.83 By MS/MS 8.5 0.5 2 2 4 6588500 6588500 0 8124 2709 8390;8391 20047;20048;20049;20050 16100;16101;16102 16100 1150 2 94105 0 LFSGLSVSSEGPSQR IVFDAGFFRVESPVKLFSGLSVSSEGPSQR LFSGLSVSSEGPSQRLGTPKSVNKAVSQSR K L F Q R L 0 1 0 0 0 1 1 2 0 0 2 0 0 1 1 5 0 0 0 1 0 0 15 0 1549.7736 Q15398 Q15398 622 636 DLGAP5 Disks large-associated protein 5 yes yes 2 0.021685 84.734 By MS/MS 4 0 1 1 379840 379840 0 8125 1509 8392 20051 16103 16103 0 35746 0 LFSLELVDESGEIR KSQIRTWSNSRGEGKLFSLELVDESGEIRA KLFSLELVDESGEIRATAFNEQVDKFFPLI K L F I R A 0 1 0 1 0 0 3 1 0 1 3 0 0 1 0 2 0 0 0 1 0 0 14 0 1605.825 P27694 P27694 221 234 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 3.1826E-17 267.39 By MS/MS 5 0 1 1 258460 258460 0 8126 744 8393 20052 16104 16104 1 2592.2 0 LFSQGIGGEQAQAK NISTLKKTLESDCTKLFSQGIGGEQAQAKF KLFSQGIGGEQAQAKFDSCLSDLAAVSNKF K L F A K F 2 0 0 0 0 3 1 3 0 1 1 1 0 1 0 1 0 0 0 0 0 0 14 0 1432.731 Q9H9E3 Q9H9E3 572 585 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 3.2855E-05 193.15 By MS/MS 4 0 1 1 1194500 1194500 0 8127 2486 8394 20053 16105 16105 1 112410 0 LFSQGQDVSNK SSGAPENLTFKERQRLFSQGQDVSNKVKAS ERQRLFSQGQDVSNKVKASRKLTELENELN R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 P55196 P55196 1797 1807 MLLT4 Afadin yes yes 2 0.042916 73.666 By MS/MS 2.5 0.5 1 1 2 154540 154540 0 8128 1057 8395 20054;20055 16106 16106 1 30509 0 LFTAESLIGLK KKGVQLQTHPNVDKKLFTAESLIGLKNPEK VDKKLFTAESLIGLKNPEKSFPVNSDVGVL K L F L K N 1 0 0 0 0 0 1 1 0 1 3 1 0 1 0 1 1 0 0 0 0 0 11 0 1190.6911 P48444 P48444 337 347 ARCN1 Coatomer subunit delta yes yes 2 4.9622E-09 204.79 By MS/MS 6.5 0.5 1 1 2 3182400 3182400 0 8129 934 8396 20056;20057 16107 16107 1 22698 0 LFTAESLIGLKNPEK KKGVQLQTHPNVDKKLFTAESLIGLKNPEK LFTAESLIGLKNPEKSFPVNSDVGVLKWRL K L F E K S 1 0 1 0 0 0 2 1 0 1 3 2 0 1 1 1 1 0 0 0 0 0 15 1 1658.9243 P48444 P48444 337 351 ARCN1 Coatomer subunit delta yes yes 3 0.035623 86.738 By MS/MS 6.5 0.5 1 1 2 9450500 9450500 0 8130 934 8397 20058;20059 16108 16108 1 67388 0 LFTESCSISPK VAYKFHMGLYGETGRLFTESCSISPKLRSI ETGRLFTESCSISPKLRSIAVYYDNPHMVP R L F P K L 0 0 0 0 1 0 1 0 0 1 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1267.6118 Q9Y6I9 Q9Y6I9 63 73 TEX264 Testis-expressed sequence 264 protein yes yes 2 0.0071702 99.788 By MS/MS 7 0 1 1 6227500 6227500 0 8131 2945 8398 20060 16109 16109 1 97760 0 LFTLTALR QLVATGAVRDWDDPRLFTLTALRRRGFPPE RDWDDPRLFTLTALRRRGFPPEAINNFCAR R L F L R R 1 1 0 0 0 0 0 0 0 0 3 0 0 1 0 0 2 0 0 0 0 0 8 0 933.56475 P47897 P47897 516 523 QARS Glutamine--tRNA ligase yes yes 2 0.00027278 166.78 By MS/MS 4.5 0.5 1 1 2 1438200 1438200 0 8132 928 8399 20061;20062 16110;16111 16110 2 104920 0 LFTTMELMR DKKLEEIPKYKDLLKLFTTMELMRWSTLVE YKDLLKLFTTMELMRWSTLVEDYGMELRKG K L F M R W 0 1 0 0 0 0 1 0 0 0 2 0 2 1 0 0 2 0 0 0 0 0 9 0 1140.5671 O00232 O00232 308 316 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.0092734 101.72 By MS/MS 6 0 1 1 810160 810160 0 8133 94 8400 20063 16112 16112 1 5569.3 0 LFVALGPIAGPEEK TEMIPLCNHPASFVKLFVALGPIAGPEEKK KLFVALGPIAGPEEKKQLKSTMLLMSEDLT K L F E K K 2 0 0 0 0 0 2 2 0 1 2 1 0 1 2 0 0 0 0 1 0 0 14 0 1439.8024 Q53R41 Q53R41 309 322 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.00047327 153.12 By MS/MS 4.5 0.5 1 1 2 1113300 1113300 0 8134 1591 8401 20064;20065 16113 16113 1 15646 0 LFVDTDADTR LAFYSQEVRDLFQMKLFVDTDADTRLSRRV LFQMKLFVDTDADTRLSRRVLRDISERGRD K L F T R L 1 1 0 3 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 1 0 0 10 0 1151.5459 Q9BZX2 Q9BZX2 153 162 UCK2 Uridine-cytidine kinase 2 yes yes 2 0.00059217 131.5 By MS/MS 8 0 1 1 1199000 1199000 0 8135 2385 8402 20066 16114 16114 1 15137 0 LFVGNLPADITEDEFK LLRRPGEKTYTQRCRLFVGNLPADITEDEF FVGNLPADITEDEFKRLFAKYGEPGEVFIN R L F F K R 1 0 1 2 0 0 2 1 0 1 2 1 0 2 1 0 1 0 0 1 0 0 16 0 1806.904 P23246 P23246 299 314 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.00096681 120.59 By MS/MS 4 0 1 1 149790 149790 0 8136 700 8403 20067 16115 16115 1 14096 0 LFVGSIPK SGKHIGVCISVANNRLFVGSIPKSKTKEQI ISVANNRLFVGSIPKSKTKEQILEEFSKVT R L F P K S 0 0 0 0 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 8 0 859.51674 O43390;O60506 O60506 245 252 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.026969 91.906 By MS/MS 5 0 1 1 1399300 1399300 0 8137 205;261 8404 20068 16116 16116 1 14034 0 LFVQDLATR ETVAKELQTLHNLRKLFVQDLATRVKKSAE LHNLRKLFVQDLATRVKKSAEIDSDDTGGS K L F T R V 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 9 0 1061.5869 P33176 P33176 802 810 KIF5B Kinesin-1 heavy chain yes yes 2 0.0016061 126.31 By MS/MS 4 0.816 1 1 1 3 5908400 5908400 0 8138 800 8405 20069;20070;20071 16117 16117 1 526440 0 LFVSDGVPGCLPVLAAAGR ______________________________ DGVPGCLPVLAAAGRARGRAEVLISTVGPE R L F G R A 3 1 0 1 1 0 0 3 0 0 3 0 0 1 2 1 0 0 0 3 0 0 19 0 1898.0084 P56192 P56192 3 21 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.00027969 124.38 By MS/MS 4 0 1 1 212200 212200 0 8139 1067 8406 20072 16118 16118 1 19970 0 LFVTNDAATILR GPNGMNKMVINHLEKLFVTNDAATILRELE LEKLFVTNDAATILRELEVQHPAAKMIVMA K L F L R E 2 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1332.7402 P50990 P50990 63 74 CCT8 T-complex protein 1 subunit theta yes yes 2 2.3775E-12 231.07 By MS/MS 5.82 2.62 1 1 1 1 3 1 1 1 1 11 147290000 147290000 0 8140 984 8407 20073;20074;20075;20076;20077;20078;20079;20080;20081;20082;20083 16119;16120;16121;16122;16123;16124;16125;16126;16127;16128;16129 16122 10 1205700 0 LFVTPPEGSSR PYKAAHSRNSMDRPKLFVTPPEGSSRRRII DRPKLFVTPPEGSSRRRIIHGTASYKKERE K L F S R R 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 2 1 0 0 1 0 0 11 0 1188.6139 Q14244 Q14244 274 284 MAP7 Ensconsin yes yes 2 0.051975 81.338 By MS/MS 4 0 1 1 0 0 0 8141 1434 8408 20084 16130 16130 1 0 0 LFVYDPNNPPSSEVLR SSGDIWVGCHPNGQKLFVYDPNNPPSSEVL FVYDPNNPPSSEVLRIQNILSEKPTVTTVY K L F L R I 0 1 2 1 0 0 1 0 0 0 2 0 0 1 3 2 0 0 1 2 0 0 16 0 1845.9261 Q15165 Q15165 290 305 PON2 Serum paraoxonase/arylesterase 2 yes yes 2 7.6663E-07 211.83 By MS/MS 7 0 1 1 651180 651180 0 8142 1493 8409 20085 16131;16132 16132 2 10222 0 LFYSTFATDDR AFEMTLTEGSKLEKKLFYSTFATDDRKEGM LEKKLFYSTFATDDRKEGMTAFVEKRKANF K L F D R K 1 1 0 2 0 0 0 0 0 0 1 0 0 2 0 1 2 0 1 0 0 0 11 0 1334.6143 P30084 P30084 262 272 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 2 0.023159 86.882 By MS/MS 8 0 1 1 256030 256030 0 8143 767 8410 20086 16133 16133 0 3232.4 0 LGAAQSPFNDLNR PPGGPGPRQQQAGARLGAAQSPFNDLNRQL ARLGAAQSPFNDLNRQLVNMGFPQWHLGNH R L G N R Q 2 1 2 1 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 13 0 1401.7001 Q96D05 Q96D05 57 69 C10orf35 Uncharacterized protein C10orf35 yes yes 2 1.2609E-05 194.48 By MS/MS 10 0 1 1 1387700 1387700 0 8144 2130 8411 20087 16134 16134 1 74792 0 LGAAVAPEGNQK LVAPMWNGRIRGIHRLGAAVAPEGNQKKKR IHRLGAAVAPEGNQKKKRTILQFLTNYFYD R L G Q K K 3 0 1 0 0 1 1 2 0 0 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1153.6091 Q9NW81 Q9NW81 25 36 ATP5SL ATP synthase subunit s-like protein yes yes 2 0.030839 79.489 By MS/MS 8 0 1 1 1242900 1242900 0 8145 2608 8412 20088 16135 16135 1 15691 0 LGADAVGMSTVPEVIVAR GPSFETVAECRVLQKLGADAVGMSTVPEVI DAVGMSTVPEVIVARHCGLRVFGFSLITNK K L G A R H 3 1 0 1 0 0 1 2 0 1 1 0 1 0 1 1 1 0 0 4 0 0 18 0 1783.9502 P00491 P00491 212 229 PNP Purine nucleoside phosphorylase yes yes 2 1.7522E-07 160.69 By MS/MS 3 0 1 1 106120 0 106120 8146 445 8413 20089 16136;16137 16136 168 2 0 13507 LGADYGLDAR KKVLDKFYKRKEIQKLGADYGLDARLFHQA KEIQKLGADYGLDARLFHQAFISFRNYIMQ K L G A R L 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1049.5142 Q8IYB8 Q8IYB8 109 118 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.0010975 121.73 By MS/MS 5 0 1 1 1272700 1272700 0 8147 1885 8414 20090 16138 16138 1 12765 0 LGALPPDIGTLGSLR ICQLPLRVLIVSNNKLGALPPDIGTLGSLR LGALPPDIGTLGSLRQLDVSSNELQSLPSE K L G L R Q 1 1 0 1 0 0 0 3 0 1 4 0 0 0 2 1 1 0 0 0 0 0 15 0 1478.8457 O75427 O75427 148 162 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.014176 87.719 By MS/MS 5 0 1 1 725390 725390 0 8148 326 8415 20091 16139 16139 1 7275.3 0 LGALQGDPEALTLYR ATLLTTWLTELYLSRLGALQGDPEALTLYR LGALQGDPEALTLYRETKECFRTFLSSPRH R L G Y R E 2 1 0 1 0 1 1 2 0 0 4 0 0 0 1 0 1 0 1 0 0 0 15 0 1615.857 Q9P253 Q9P253 503 517 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 0.00041469 141.73 By MS/MS 4.5 0.5 1 1 2 1949700 1949700 0 8149 2677 8416 20092;20093 16140 16140 1 158270 0 LGAPALTSR TCPGDRSAITPGGLRLGAPALTSRQFREDD TPGGLRLGAPALTSRQFREDDFRRVVDFID R L G S R Q 2 1 0 0 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 9 0 884.50797 P34897 P34897 426 434 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.034281 82.75 By MS/MS By matching 6.33 0.471 2 1 2 1 4659400 4587000 72377 8150 809 8417 20094;20095;20096 16141 16141 1 34570 74166 LGAPQQPGPGPPPSR QREAEYFELPELVRRLGAPQQPGPGPPPSR LGAPQQPGPGPPPSRRGVHKEGSLGDELLP R L G S R R 1 1 0 0 0 2 0 3 0 0 1 0 0 0 6 1 0 0 0 0 0 0 15 0 1454.763 Q96CX2 Q96CX2 129 143 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2 0.0036412 80.69 By MS/MS 7 0 1 1 529580 529580 0 8151 2129 8418 20097 16142 16142 1 8313.5 0 LGAQALLGAAK DGGVKMGLPRRLAVRLGAQALLGAAKMLLH LAVRLGAQALLGAAKMLLHSEQHPGQLKDN R L G A K M 4 0 0 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1011.6077 P32322 P32322 205 215 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 5.0671E-13 229.33 By MS/MS 8.5 1.12 1 1 1 1 4 54367000 54367000 0 8152 797 8419 20098;20099;20100;20101 16143;16144;16145 16143 3 704110 0 LGASALDSIQEFR IGPTLLLNSDIIRARLGASALDSIQEFRLS ARLGASALDSIQEFRLSGWLAQQEDAHRIV R L G F R L 2 1 0 1 0 1 1 1 0 1 2 0 0 1 0 2 0 0 0 0 0 0 13 0 1405.7201 Q8IY17 Q8IY17 825 837 PNPLA6 Neuropathy target esterase yes yes 2 2.4107E-11 227.81 By MS/MS 3.5 0.5 1 1 2 611970 611970 0 8153 1880 8420 20102;20103 16146;16147 16147 2 51076 0 LGASLAFNNIYR KRLYSLALHPNAFKRLGASLAFNNIYREFR FKRLGASLAFNNIYREFREEESLVEQFVFE R L G Y R E 2 1 2 0 0 0 0 1 0 1 2 0 0 1 0 1 0 0 1 0 0 0 12 0 1337.7092 P78527 P78527 1076 1087 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 8.9356E-18 251.56 By MS/MS 1.5 0.5 1 1 2 458440 458440 0 8154 1225 8421 20104;20105 16148;16149 16149 2 136010 0 LGAVYDVSHYNALLK ERTEFAHRIWDTLQKLGAVYDVSHYNALLK LGAVYDVSHYNALLKVYLQNEYKFSPTDFL K L G L K V 2 0 1 1 0 0 0 1 1 0 3 1 0 0 0 1 0 0 2 2 0 0 15 0 1661.8777 P42704 P42704 156 170 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.042205 67.118 By MS/MS 3 0 1 1 188050 188050 0 8155 886 8422 20106 16150 16150 1 3440.7 0 LGCQDAFPEVYDK WEMFDGSLYHKLREKLGCQDAFPEVYDKIC EKLGCQDAFPEVYDKICKAARH________ K L G D K I 1 0 0 2 1 1 1 1 0 0 1 1 0 1 1 0 0 0 1 1 0 0 13 0 1540.6868 Q15392 Q15392 497 509 DHCR24 Delta(24)-sterol reductase yes yes 2 2.2785E-11 228.93 By MS/MS 3 1.87 1 1 1 1 4 4294000 4294000 0 8156 1507 8423 20107;20108;20109;20110 16151;16152;16153;16154;16155 16152 5 386790 0 LGDASIAAPFTSK QVLRDLEDESTPIVKLGDASIAAPFTSKLS VKLGDASIAAPFTSKLSSIQCICHVIKQGR K L G S K L 3 0 0 1 0 0 0 1 0 1 1 1 0 1 1 2 1 0 0 0 0 0 13 0 1276.6663 Q9HD20 Q9HD20 951 963 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 3.0938E-05 181.4 By MS/MS 2.5 1.12 1 1 1 1 4 1449800 1449800 0 8157 2517 8424 20111;20112;20113;20114 16156;16157;16158 16156 3 276850 0 LGDDIDLIVR KNEIASVAYRYRRWKLGDDIDLIVRCEHDG YRRWKLGDDIDLIVRCEHDGVMTGANGEVS K L G V R C 0 1 0 3 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1127.6186 O15371 O15371 365 374 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 1.8209E-05 169.09 By MS/MS By MS/MS 5.44 2.45 1 1 2 2 1 1 1 7 2 23634000 23506000 127990 8158 185 8425 20115;20116;20117;20118;20119;20120;20121;20122;20123 16159;16160;16161;16162;16163;16164;16165;16166 16163 8 275000 122190 LGDFGLAR IKSSNVLLDERLTPKLGDFGLARFSRFAGS DERLTPKLGDFGLARFSRFAGSSPSQSSMV K L G A R F 1 1 0 1 0 0 0 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 847.4552 P51617;P51955 P51617 356 363 IRAK1;NEK2 Interleukin-1 receptor-associated kinase 1;Serine/threonine-protein kinase Nek2 yes no 2 0.0053896 123.69 By MS/MS 5 0 1 1 1679400 1679400 0 8159 1001 8426 20124 16167 16167 1 16843 0 LGDGLFLQCCR GRKKVTAVHKANIMKLGDGLFLQCCREVAA NIMKLGDGLFLQCCREVAARYPQITFENMI K L G C R E 0 1 0 1 2 1 0 2 0 0 3 0 0 1 0 0 0 0 0 0 0 0 11 0 1337.622 P51553 P51553 227 237 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 4.2719E-06 178.55 By MS/MS 7 0 1 1 4685800 4685800 0 8160 996 8427 20125 16168 16168 1 73559 0 LGDHQSPATPAFK YSAFLPDGCDHLRDKLGDHQSPATPAFKSL DKLGDHQSPATPAFKSLEAFFLYGRLYEFW K L G F K S 2 0 0 1 0 1 0 1 1 0 1 1 0 1 2 1 1 0 0 0 0 0 13 0 1367.6834 Q8TEQ6 Q8TEQ6 1262 1274 GEMIN5 Gem-associated protein 5 yes yes 3 0.0078068 91.307 By MS/MS 3 0 1 1 518060 518060 0 8161 2002 8428 20126 16169 16169 1 9479 0 LGDKHATLQK AVRNQRKLLASLVKRLGDKHATLQKSTKEV SLVKRLGDKHATLQKSTKEVRSSIRQVSDV R L G Q K S 1 0 0 1 0 1 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 10 1 1109.6193 Q13263 Q13263 263 272 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 0.00010677 145.46 By MS/MS 4.86 1.25 1 2 2 1 1 7 7735700 7735700 0 8162 1367 8429 20127;20128;20129;20130;20131;20132;20133 16170;16171;16172;16173 16170 4 543100 0 LGDLGAIDEK IQEKKSGRIPGIYGRLGDLGAIDEKYDVAI GIYGRLGDLGAIDEKYDVAISSCCHALDYI R L G E K Y 1 0 0 2 0 0 1 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1029.5342 Q9NTJ3 Q9NTJ3 619 628 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0019915 112.36 By MS/MS 3 0 1 1 1294500 1294500 0 8163 2575 8430 20134 16174 16174 1 23686 0 LGDQPSIGLAQTLEK RGMIVIGLETHPAGRLGDQPSIGLAQTLEK LGDQPSIGLAQTLEKLGFVVGRLKTGTPPR R L G E K L 1 0 0 1 0 2 1 2 0 1 3 1 0 0 1 1 1 0 0 0 0 0 15 0 1568.841 Q9Y2Z2 Q9Y2Z2 213 227 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 2.8849E-05 217.68 By MS/MS 5 0 1 1 1773000 1773000 0 8164 2851 8431 20135 16175 16175 1 17783 0 LGDSQLVK CLTYLDNGVVFVGSRLGDSQLVKLNVDSNE VVFVGSRLGDSQLVKLNVDSNEQGSYVVAM R L G V K L 0 0 0 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 858.48108 Q16531 Q16531 328 335 DDB1 DNA damage-binding protein 1 yes yes 2 0.025838 93.162 By MS/MS 2.5 1.12 1 1 1 1 4 1558000 1558000 0 8165 1549 8432 20136;20137;20138;20139 16176 16176 1 228520 0 LGDSSLSR LEIEERERRREEERRLGDSSLSRKDSRWGD RREEERRLGDSSLSRKDSRWGDRDSEGTWR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00025147 167.9 By MS/MS By MS/MS 3.33 1.83 2 1 2 2 1 1 6 3 41232000 40667000 565630 8166 1422 8433 20140;20141;20142;20143;20144;20145;20146;20147;20148 16177;16178;16179;16180;16181;16182;16183 16181 7 1606400 238460 LGDSSLSRK LEIEERERRREEERRLGDSSLSRKDSRWGD REEERRLGDSSLSRKDSRWGDRDSEGTWRK R L G R K D 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 0 0 0 0 0 9 1 961.51926 Q14152 Q14152 878 886 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0061545 96.034 By MS/MS 3.5 0.5 1 1 2 864260 864260 0 8167 1422 8434 20149;20150 16184 16184 1 21262 0 LGDTNER DEMRGYAEKLIDYGKLGDTNERAMRMADFW EKLIDYGKLGDTNERAMRMADFWLTEKDLI K L G E R A 0 1 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 803.37735 Q9NRX2 Q9NRX2 65 71 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.034145 101.6 By MS/MS By matching 9.33 0.471 2 1 2 1 3481800 3469600 12218 8168 2561 8435 20151;20152;20153 16185 16185 1 74526 27861 LGDTPGVSYSDIAAR KDVSDEDVARAINQKLGDTPGVSYSDIAAR LGDTPGVSYSDIAARAYGCGRTELAIKLLE K L G A R A 2 1 0 2 0 0 0 2 0 1 1 0 0 0 1 2 1 0 1 1 0 0 15 0 1520.7471 Q9H269 Q9H269 511 525 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 0.0050015 103.46 By MS/MS By matching 2.67 1.25 1 1 1 2 1 4454500 4090900 363600 8169 2427 8436 20154;20155;20156 16186;16187 16186 2 416160 46281 LGDVGMAELCPGLLHPSSR ASKASLRELALGSNKLGDVGMAELCPGLLH GMAELCPGLLHPSSRLRTLWIWECGITAKG K L G S R L 1 1 0 1 1 0 1 3 1 0 4 0 1 0 2 2 0 0 0 1 0 0 19 0 2007.987 P13489 P13489 239 257 RNH1 Ribonuclease inhibitor yes yes 3 0.0012042 103.67 By MS/MS 7 0 1 1 1784000 1784000 0 8170 601 8437 20157 16188;16189;16190 16189 281 3 28005 0 LGDVISIQPCPDVK KIRMNRVVRNNLRVRLGDVISIQPCPDVKY RLGDVISIQPCPDVKYGKRIHVLPIDDTVE R L G V K Y 0 0 0 2 1 1 0 1 0 2 1 1 0 0 2 1 0 0 0 2 0 0 14 0 1539.7967 P55072 P55072 96 109 VCP Transitional endoplasmic reticulum ATPase yes yes 2 7.1903E-17 263.07 By MS/MS By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 10 1 39504000 39448000 55662 8171 1054 8438 20158;20159;20160;20161;20162;20163;20164;20165;20166;20167;20168 16191;16192;16193;16194;16195;16196;16197;16198 16194 7 2926700 118600 LGDVYVNDAFGTAHR AEPAKIEAFRASLSKLGDVYVNDAFGTAHR LGDVYVNDAFGTAHRAHSSMVGVNLPQKAG K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P00558;P07205 P00558 157 171 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 2;3 2.3355E-07 234.87 By MS/MS 7.33 0.471 2 1 3 8772400 8772400 0 8172 447 8439 20169;20170;20171 16199;16200 16200 2 135360 0 LGEASDSELADADK PRPRPTRTSLLRRARLGEASDSELADADKA RLGEASDSELADADKASVASEVSTTSSTSK R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 Q5SW79 Q5SW79 1108 1121 CEP170 Centrosomal protein of 170 kDa yes yes 2 5.9243E-09 225.55 By MS/MS 2 0 1 1 951400 951400 0 8173 1623 8440 20172 16201 16201 1 321800 0 LGEFFQTK DIENEVVQITWNRKKLGEFFQTKYDWDLLA ITWNRKKLGEFFQTKYDWDLLAARSIWAFG K L G T K Y 0 0 0 0 0 1 1 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 8 0 968.49673 Q15029 Q15029 714 721 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0059985 120.87 By MS/MS 3.5 0.5 1 1 2 1448900 1448900 0 8174 1476 8441 20173;20174 16202 16202 1 100470 0 LGEHNIDVLEGNEQFINAAK VVSAAHCYKSRIQVRLGEHNIDVLEGNEQF IDVLEGNEQFINAAKIITHPNFNGNTLDND R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 2;3 1.8809E-108 420.76 By MS/MS By MS/MS 6.23 2.87 6 4 4 4 7 6 7 8 11 8 24 41 3846500000 2862100000 984410000 + 8175 37 8442 20175;20176;20177;20178;20179;20180;20181;20182;20183;20184;20185;20186;20187;20188;20189;20190;20191;20192;20193;20194;20195;20196;20197;20198;20199;20200;20201;20202;20203;20204;20205;20206;20207;20208;20209;20210;20211;20212;20213;20214;20215;20216;20217;20218;20219;20220;20221;20222;20223;20224;20225;20226;20227;20228;20229;20230;20231;20232;20233;20234;20235;20236;20237;20238;20239 16203;16204;16205;16206;16207;16208;16209;16210;16211;16212;16213;16214;16215;16216;16217;16218;16219;16220;16221;16222;16223;16224;16225;16226;16227;16228;16229;16230;16231;16232;16233;16234;16235;16236;16237;16238;16239;16240;16241;16242;16243;16244;16245;16246;16247;16248;16249;16250;16251;16252;16253;16254;16255;16256;16257;16258;16259;16260;16261;16262;16263;16264;16265;16266;16267;16268;16269;16270;16271;16272;16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283;16284;16285;16286;16287 16271 83 137480000 1284400000 LGEHNIEVLEGNEQFINAAK VVSAGHCYKSRIQVRLGEHNIEVLEGNEQF IEVLEGNEQFINAAKIIRHPQYDRKTLNND R L G A K I 2 0 3 0 0 1 4 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2224.1124 CON__P07477;P07477;Q8NHM4;P07478 CON__P07477 73 92 PRSS1;PRSS3P2;PRSS2 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2;Putative trypsin-6;Trypsin-2 yes no 3 1.4451E-17 202.84 By MS/MS By MS/MS 5.7 2.83 2 1 2 2 2 4 2 2 3 11 9 29174000 25410000 3764500 + 8176 46 8443 20240;20241;20242;20243;20244;20245;20246;20247;20248;20249;20250;20251;20252;20253;20254;20255;20256;20257;20258;20259 16288;16289;16290;16291;16292;16293;16294;16295;16296;16297;16298;16299;16300;16301;16302;16303 16293 16 1047200 4867000 LGELCVDPR PAPPFDCLWLCLYAKLGELCVDPRPAVRKS LCLYAKLGELCVDPRPAVRKSAGQTLFSTI K L G P R P 0 1 0 1 1 0 1 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 9 0 1057.5226 Q7Z3U7 Q7Z3U7 1029 1037 MON2 Protein MON2 homolog yes yes 2 0.0090765 102.07 By MS/MS 2 0 1 1 493460 493460 0 8177 1787 8444 20260 16304 16304 1 166910 0 LGELELQLK LAYMNRAYHAILQGRLGELELQLKHGKEEP AILQGRLGELELQLKHGKEEPEEVQYKKST R L G L K H 0 0 0 0 0 1 2 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 9 0 1041.607 Q5VW36 Q5VW36 909 917 FOCAD Focadhesin yes yes 2 0.001228 138.06 By MS/MS 3.5 0.5 1 1 2 631800 631800 0 8178 1654 8445 20261;20262 16305 16305 1 25785 0 LGELILTSESSR VRQKIAITHKNKINRLGELILTSESSRYQF INRLGELILTSESSRYQFRNLADCLQKIRD R L G S R Y 0 1 0 0 0 0 2 1 0 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1303.6983 Q14197 Q14197 130 141 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.00020829 152.7 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 9015900 8926500 89413 8179 1431 8446 20263;20264;20265 16306;16307 16307 2 183570 203890 LGELTGTVK IESETVRTSEVLRKKLGELTGTVKESLHEV EVLRKKLGELTGTVKESLHEVSKSDLGRKI K L G V K E 0 0 0 0 0 0 1 2 0 0 2 1 0 0 0 0 2 0 0 1 0 0 9 0 916.52295 O43615 O43615 122 130 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.003184 124.08 By MS/MS 7 0 1 1 0 0 0 8180 221 8447 20266 16308 16308 1 0 0 LGENIIPYVADGAK VHALNILRALFRDTRLGENIIPYVADGAKA RLGENIIPYVADGAKAAILGFTSPVWAVRN R L G A K A 2 0 1 1 0 0 1 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1458.7718 Q6YHU6 Q6YHU6 1223 1236 THADA Thyroid adenoma-associated protein yes yes 2 0.020163 96.756 By MS/MS 2 0 1 1 306100 306100 0 8181 1739 8448 20267 16309 16309 1 103530 0 LGEPSEIDQR FAHSIRSIFANVEAKLGEPSEIDQRDKYVG NVEAKLGEPSEIDQRDKYVGICGLFVLHFQ K L G Q R D 0 1 0 1 0 1 2 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1142.5568 Q2M389 Q2M389 303 312 KIAA1033 WASH complex subunit 7 yes yes 2 0.011188 91.658 By MS/MS 3 0 1 1 163800 163800 0 8182 1568 8449 20268 16310 16310 1 2997.1 0 LGEQCEAVVR NSALMELDKGLRSGKLGEQCEAVVRFPRLF LRSGKLGEQCEAVVRFPRLFQKYPFPILIN K L G V R F 1 1 0 0 1 1 2 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1159.5656 Q9NVH2 Q9NVH2 38 47 INTS7 Integrator complex subunit 7 yes yes 2 0.00030244 140.17 By MS/MS 4 0 1 1 334690 334690 0 8183 2596 8450 20269 16311 16311 1 31497 0 LGESANAAK ELKVGIPVTDENGNRLGESANAAKQAITQV DENGNRLGESANAAKQAITQVVVSRILMAA R L G A K Q 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 859.43995 Q9H9B4 Q9H9B4 215 223 SFXN1 Sideroflexin-1 yes yes 2 0.00025866 154.12 By MS/MS 8.5 1.12 1 1 1 1 4 13867000 13867000 0 8184 2485 8451 20270;20271;20272;20273 16312;16313 16312 2 185150 0 LGESVQDLSSFDEYSSELK DDEDISEDIKFLLEKLGESVQDLSSFDEYS VQDLSSFDEYSSELKSGRLEWSPVHKSEKF K L G L K S 0 0 0 2 0 1 3 1 0 0 3 1 0 1 0 5 0 0 1 1 0 0 19 0 2131.9797 Q9UI12 Q9UI12 342 360 ATP6V1H V-type proton ATPase subunit H yes yes 2 1.261E-17 264.31 By MS/MS 6 0 1 1 1049400 1049400 0 8185 2735 8452 20274 16314;16315 16314 2 7213.9 0 LGETDEEK STCQRFVEKYTELQKLGETDEEKLFVETGK KYTELQKLGETDEEKLFVETGKALLAEGVI K L G E K L 0 0 0 1 0 0 3 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 0 919.41346 Q9Y3D9 Q9Y3D9 109 116 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 4.5324E-06 180.93 By MS/MS 9 0 1 1 2055200 2055200 0 8186 2875 8453 20275 16316 16316 1 40446 0 LGETDEEKLFVETGK STCQRFVEKYTELQKLGETDEEKLFVETGK LGETDEEKLFVETGKALLAEGVILRRVGEA K L G G K A 0 0 0 1 0 0 4 2 0 0 2 2 0 1 0 0 2 0 0 1 0 0 15 1 1693.841 Q9Y3D9 Q9Y3D9 109 123 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 3.3446E-11 243.37 By MS/MS By matching 9 0 3 2 1 13000000 12963000 36515 8187 2875 8454 20276;20277;20278 16317;16318 16318 2 255120 83267 LGEWDLPEAVQR QSKRTVNIRTRDNRRLGEWDLPEAVQRLVE NRRLGEWDLPEAVQRLVELQNTRVPNAEEI R L G Q R L 1 1 0 1 0 1 2 1 0 0 2 0 0 0 1 0 0 1 0 1 0 0 12 0 1411.7096 Q9BW92 Q9BW92 691 702 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0010887 123.51 By MS/MS 6.5 1.5 1 1 2 4491900 4491900 0 8188 2346 8455 20279;20280 16319;16320 16319 2 45525 0 LGEWVGLCK AEHQINLIKVDDNKKLGEWVGLCKIDREGK VDDNKKLGEWVGLCKIDREGKPRKVVGCSC K L G C K I 0 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 9 0 1060.5376 P25398 P25398 85 93 RPS12 40S ribosomal protein S12 yes yes 2 0.00023008 155 By MS/MS 10 0 1 1 8916100 8916100 0 8189 721 8456 20281 16321 16321 1 480540 0 LGEWVGLCKIDR AEHQINLIKVDDNKKLGEWVGLCKIDREGK NKKLGEWVGLCKIDREGKPRKVVGCSCVVV K L G D R E 0 1 0 1 1 0 1 2 0 1 2 1 0 0 0 0 0 1 0 1 0 0 12 1 1444.7497 P25398 P25398 85 96 RPS12 40S ribosomal protein S12 yes yes 3 0.028095 72.289 By MS/MS 10 0 1 1 141020 141020 0 8190 721 8457 20282 16322 16322 1 7600.3 0 LGEYGFQNALIVR EPQNLIKQNCDQFEKLGEYGFQNALIVRYT EKLGEYGFQNALIVRYTRKVPQVSTPTLVE K L G V R Y 1 1 1 0 0 1 1 2 0 1 2 0 0 1 0 0 0 0 1 1 0 0 13 0 1478.7882 CON__P02769 CON__P02769 421 433 yes yes 2 1.7024E-11 233.84 By MS/MS By MS/MS 5.6 0.49 2 3 3 2 3539300 3432400 106870 + 8191 43 8458 20283;20284;20285;20286;20287 16323;16324;16325;16326 16325 4 26131 102910 LGFAGLVQEISFGTTK GGRIVPRFSELTAEKLGFAGLVQEISFGTT GFAGLVQEISFGTTKDKMLVIEQCKNSRAV K L G T K D 1 0 0 0 0 1 1 3 0 1 2 1 0 2 0 1 2 0 0 1 0 0 16 0 1666.893 P48643 P48643 353 368 CCT5 T-complex protein 1 subunit epsilon yes yes 2 9.1428E-05 187.74 By MS/MS 6 0 1 1 189860 189860 0 8192 940 8459 20288 16327 16327 1 1305.2 0 LGFEGGQTPFYIR GRGHKGERQRGTRPRLGFEGGQTPFYIRIP PRLGFEGGQTPFYIRIPKYGFNEGHSFRRQ R L G I R I 0 1 0 0 0 1 1 3 0 1 1 0 0 2 1 0 1 0 1 0 0 0 13 0 1483.746 Q9P015 Q9P015 65 77 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 1.3226E-11 262.07 By MS/MS 8.5 1.12 1 1 1 1 4 4460400 4460400 0 8193 2659 8460 20289;20290;20291;20292 16328;16329 16328 2 60134 0 LGFITNNSSK GAPEALRALRARGKRLGFITNNSSKTRAAY ARGKRLGFITNNSSKTRAAYAEKLRRLGFG R L G S K T 0 0 2 0 0 0 0 1 0 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1079.5611 A6NDG6 A6NDG6 63 72 PGP Phosphoglycolate phosphatase yes yes 2 0.030017 91.265 By MS/MS 8 0 1 1 0 0 0 8194 20 8461 20293 16330 16330 1 0 0 LGFLHSGTAK SVPSQKTYQGSYGFRLGFLHSGTAKSVTCT SYGFRLGFLHSGTAKSVTCTYSPALNKMFC R L G A K S 1 0 0 0 0 0 0 2 1 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1029.5607 P04637 P04637 111 120 TP53 Cellular tumor antigen p53 yes yes 3 0.042167 72.643 By MS/MS 6 0 1 1 2837500 2837500 0 8195 476 8462 20294 16331 16331 1 19505 0 LGFLVAK NINPVSMDICKQEEKLGFLVAKQDLVISLL DICKQEEKLGFLVAKQDLVISLLPYVLHPL K L G A K Q 1 0 0 0 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 7 0 746.46906 Q9UDR5 Q9UDR5 540 546 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.036922 99.511 By MS/MS 4 0 1 1 424810 424810 0 8196 2710 8463 20295 16332 16332 1 39978 0 LGFMSAFVK RARHKEAFLKKHNLKLGFMSAFVKASAFAL KKHNLKLGFMSAFVKASAFALQEQPVVNAV K L G V K A 1 0 0 0 0 0 0 1 0 0 1 1 1 2 0 1 0 0 0 1 0 0 9 0 998.52592 P36957 P36957 278 286 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.034281 82.75 By MS/MS 6 0 1 1 561760 561760 0 8197 842 8464 20296 16333 16333 1 3861.7 0 LGFSEYCR NEDINQESAPKASLRLGFSEYCRISNLIVL APKASLRLGFSEYCRISNLIVLHLRKVEEE R L G C R I 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 8 0 1030.4542 Q14566 Q14566 715 722 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.02311 96.19 By MS/MS 4 0 1 1 1692200 1692200 0 8198 1444 8465 20297 16334 16334 1 159250 0 LGFTGSTPIGK GIAGQRLSEHPDIRKLGFTGSTPIGKQIMK DIRKLGFTGSTPIGKQIMKSCAVSNLKKVS K L G G K Q 0 0 0 0 0 0 0 3 0 1 1 1 0 1 1 1 2 0 0 0 0 0 11 0 1076.5866 Q3SY69 Q3SY69 667 677 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.00026942 137.05 By MS/MS 4 0 1 1 1319800 1319800 0 8199 1578 8466 20298 16335 16335 1 124200 0 LGFTPSVTIEQR VRHHLVQHMVSAMQRLGFTPSVTIEQRRLA MQRLGFTPSVTIEQRRLAVDLSEVVIKWEL R L G Q R R 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 1 2 0 0 1 0 0 12 0 1346.7194 Q9Y4A5 Q9Y4A5 1992 2003 TRRAP Transformation/transcription domain-associated protein yes yes 2 0.0064457 99.343 By MS/MS 1.5 0.5 1 1 2 431870 431870 0 8200 2890 8467 20299;20300 16336 16336 1 125610 0 LGGAVLSFSEATSSVQK VSTRTSSSFAAAMARLGGAVLSFSEATSSV GAVLSFSEATSSVQKGESLADSVQTMSCYA R L G Q K G 2 0 0 0 0 1 1 2 0 0 2 1 0 1 0 4 1 0 0 2 0 0 17 0 1679.873 P27708 P27708 1987 2003 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 3.8295E-57 350.4 By MS/MS 1.5 0.5 1 1 2 471880 471880 0 8201 745 8468 20301;20302 16337;16338 16338 2 144460 0 LGGDEGTSQTSFETSNR YQMTGEAWKLSSGHKLGGDEGTSQTSFETS GDEGTSQTSFETSNREAAKSQNLPKPLTEF K L G N R E 0 1 1 1 0 1 2 3 0 0 1 0 0 1 0 3 3 0 0 0 0 0 17 0 1784.7813 O00124 O00124 134 150 UBXN8 UBX domain-containing protein 8 yes yes 2 1.5456E-57 356.59 By MS/MS 7.5 0.5 1 1 2 2039100 2039100 0 8202 81 8469 20303;20304 16339;16340 16339 2 29084 0 LGGEGGKGGDVWVVAQNR RLFTRGGSGGMGYPRLGGEGGKGGDVWVVA EGGKGGDVWVVAQNRMTLKQLKDRYPRKRF R L G N R M 1 1 1 1 0 1 1 6 0 0 1 1 0 0 0 0 0 1 0 3 0 0 18 1 1797.9122 A4D1E9 A4D1E9 35 52 GTPBP10 GTP-binding protein 10 yes yes 3 0.0025099 97.823 By MS/MS 6.5 0.5 1 1 2 1791300 1791300 0 8203 15 8470 20305;20306 16341 16341 1 18118 0 LGGEVSCLVAGTK SLAPITLNTITAATRLGGEVSCLVAGTKCD TRLGGEVSCLVAGTKCDKVAQDLCKVAGIA R L G T K C 1 0 0 0 1 0 1 3 0 0 2 1 0 0 0 1 1 0 0 2 0 0 13 0 1289.6649 P13804 P13804 47 59 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 1.5512E-08 223.87 By MS/MS 8 0 1 1 3416700 3416700 0 8204 606 8471 20307 16342 16342 1 43136 0 LGGGLNPGLVR RFVDCRKPGLQHEFRLGGGLNPGLVRALAI HEFRLGGGLNPGLVRALAISPSGRSVVAGF R L G V R A 0 1 1 0 0 0 0 4 0 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1051.6138 Q562E7 Q562E7 1780 1790 WDR81 WD repeat-containing protein 81 yes yes 2 1.987E-05 163.99 By MS/MS 2 0 1 1 547690 547690 0 8205 1593 8472 20308 16343 16343 1 185250 0 LGGIGQFLAK RTPLHEIALSIKLLRLGGIGQFLAKAIEPP IKLLRLGGIGQFLAKAIEPPPLDAVIEAEH R L G A K A 1 0 0 0 0 1 0 3 0 1 2 1 0 1 0 0 0 0 0 0 0 0 10 0 1002.5862 Q08211 Q08211 810 819 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00042116 134.81 By MS/MS 3 0.816 1 1 1 3 836150 836150 0 8206 1307 8473 20309;20310;20311 16344;16345 16345 2 92969 0 LGGLQFDKELR AVELEKVVLKSTFNRLGGLQFDKELRSLIA TFNRLGGLQFDKELRSLIAYLTTVTTWTIR R L G L R S 0 1 0 1 0 1 1 2 0 0 3 1 0 1 0 0 0 0 0 0 0 0 11 1 1274.6983 Q9H9E3 Q9H9E3 699 709 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.040479 95.483 By MS/MS 4 0 1 1 881290 881290 0 8207 2486 8474 20312 16346 16346 1 82935 0 LGGNEIVSFLK EVPISFVDRVYGESKLGGNEIVSFLKGLLT GESKLGGNEIVSFLKGLLTLFATT______ K L G L K G 0 0 1 0 0 0 1 2 0 1 2 1 0 1 0 1 0 0 0 1 0 0 11 0 1175.655 O60762 O60762 241 251 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 1.2234E-06 187.99 By MS/MS 8.4 1.02 1 2 1 1 5 29309000 29309000 0 8208 275 8475 20313;20314;20315;20316;20317 16347;16348;16349;16350;16351;16352 16347 6 377450 0 LGGNPGTNSR VGYNPYSHLAYNNYRLGGNPGTNSRVTASS YNNYRLGGNPGTNSRVTASSGITIPKPPKP R L G S R V 0 1 2 0 0 0 0 3 0 0 1 0 0 0 1 1 1 0 0 0 0 0 10 0 971.47846 Q969G3 Q969G3 41 50 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 2 0.010326 93.598 By MS/MS By matching 6 0 2 1 1 1615200 1595400 19826 8209 2091 8476 20318;20319 16353 16353 1 10967 20316 LGGPEAGLGEYLFER KLIKKMGDHLTNLHRLGGPEAGLGEYLFER LGGPEAGLGEYLFERLTLKHD_________ R L G E R L 1 1 0 0 0 0 3 4 0 0 3 0 0 1 1 0 0 0 1 0 0 0 15 0 1606.7991 P02792 P02792 155 169 FTL Ferritin light chain yes yes 2 0.00044578 144.28 By MS/MS 9 0 1 1 216350 216350 0 8210 460 8477 20320 16354 16354 1 4257.9 0 LGGPQLR ______________________________ NVVYPLYRLGGPQLRVFRTNFFIQLVRPGV R L G L R V 0 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 739.43407 Q16540 Q16540 12 18 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 0.013362 126.68 By MS/MS 9 0 1 1 1027600 1027600 0 8211 1550 8478 20321 16355 16355 1 20224 0 LGGSLADSYLDEGFLLDK LKGSGNLEAIHIIKKLGGSLADSYLDEGFL SLADSYLDEGFLLDKKIGVNQPKRIENAKI K L G D K K 1 0 0 3 0 0 1 3 0 0 5 1 0 1 0 2 0 0 1 0 0 0 18 0 1911.9466 P78371 P78371 205 222 CCT2 T-complex protein 1 subunit beta yes yes 2 3.0028E-24 272.77 By MS/MS 6 0 1 1 3130300 3130300 0 8212 1222 8479 20322 16356 16356 1 21519 0 LGGSLADSYLDEGFLLDKK LKGSGNLEAIHIIKKLGGSLADSYLDEGFL LADSYLDEGFLLDKKIGVNQPKRIENAKIL K L G K K I 1 0 0 3 0 0 1 3 0 0 5 2 0 1 0 2 0 0 1 0 0 0 19 1 2040.0415 P78371 P78371 205 223 CCT2 T-complex protein 1 subunit beta yes yes 2;3 7.2187E-12 236.42 By MS/MS 6.2 0.4 4 1 5 63467000 63467000 0 8213 1222 8480 20323;20324;20325;20326;20327 16357;16358;16359;16360;16361 16360 5 437630 0 LGGSPFGPAGTGK TDRCYLTMTQALEARLGGSPFGPAGTGKTE ARLGGSPFGPAGTGKTESVKALGHQLGRFV R L G G K T 1 0 0 0 0 0 0 5 0 0 1 1 0 1 2 1 1 0 0 0 0 0 13 0 1144.5877 Q14204 Q14204 1900 1912 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00024063 158.47 By MS/MS 1.5 0.5 1 1 2 6320700 6320700 0 8214 1433 8481 20328;20329 16362;16363 16362 2 1785700 0 LGGTIDDCELVEGLVLTQK TATSVDLRDIKIVKKLGGTIDDCELVEGLV IDDCELVEGLVLTQKVSNSGITRVEKAKIG K L G Q K V 0 0 0 2 1 1 2 3 0 1 4 1 0 0 0 0 2 0 0 2 0 0 19 0 2059.0507 P50991 P50991 214 232 CCT4 T-complex protein 1 subunit delta yes yes 2;3 3.7266E-13 312.91 By MS/MS 6.4 0.49 3 2 5 14541000 14541000 0 8215 985 8482 20330;20331;20332;20333;20334 16364;16365;16366 16365 3 101310 0 LGGVSSTEELDIR KAAVEDSGTTVETIKLGGVSSTEELDIRTL IKLGGVSSTEELDIRTLQTKNRKLAEMLDQ K L G I R T 0 1 0 1 0 0 2 2 0 1 2 0 0 0 0 2 1 0 0 1 0 0 13 0 1374.6991 Q5VTR2 Q5VTR2 37 49 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.00018999 163.9 By MS/MS 3 0 1 1 576740 576740 0 8216 1648 8483 20335 16367 16367 1 10553 0 LGHAETDEQLQNIISK ASQDELNQLERVFLRLGHAETDEQLQNIIS GHAETDEQLQNIISKFLPPVLLKLSSTQEG R L G S K F 1 0 1 1 0 2 2 1 1 2 2 1 0 0 0 1 1 0 0 0 0 0 16 0 1794.9112 Q5VYK3 Q5VYK3 23 38 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2;3 1.5534E-05 198.37 By MS/MS 2 0 2 2 1868300 1868300 0 8217 1656 8484 20336;20337 16368;16369 16369 2 631950 0 LGHEEQQKR EALLGVQEDVDEYVKLGHEEQQKRLQAIIK VDEYVKLGHEEQQKRLQAIIKKIDLDSDGF K L G K R L 0 1 0 0 0 2 2 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1123.5734 Q14257 Q14257 57 65 RCN2 Reticulocalbin-2 yes yes 2;3 0.0042158 131.06 By MS/MS 7 0.816 2 2 2 6 8445000 8445000 0 8218 1436 8485 20338;20339;20340;20341;20342;20343 16370;16371;16372;16373;16374;16375 16370 6 68473 0 LGHPDTLNQGEFK NIETIINTFHQYSVKLGHPDTLNQGEFKEL VKLGHPDTLNQGEFKELVRKDLQNFLKKEN K L G F K E 0 0 1 1 0 1 1 2 1 0 2 1 0 1 1 0 1 0 0 0 0 0 13 0 1454.7154 P06702 P06702 26 38 S100A9 Protein S100-A9 yes yes 2 0.040132 68.786 By MS/MS 9 0 1 1 72094 0 72094 8219 498 8486 20344 16376 16376 1 0 164400 LGHPEALSAGTGSPQPPSFTYAQQR SPGAPGGSGSQPNQKLGHPEALSAGTGSPQ TGSPQPPSFTYAQQREKPRVQEKQHPVPPP K L G Q R E 3 1 0 0 0 3 1 3 1 0 2 0 0 1 4 3 2 0 1 0 0 0 25 0 2596.267 Q15942 Q15942 296 320 ZYX Zyxin yes yes 3 7.287E-09 139.16 By MS/MS 5 0 1 1 4349800 4349800 0 8220 1541 8487 20345 16377 16377 1 43627 0 LGHVVMGNNAVSPYQQVIEK NLIRNARLDAKIDSKLGHVVMGNNAVSPYQ MGNNAVSPYQQVIEKTKSLSFRSQMLAMNI K L G E K T 1 0 2 0 0 2 1 2 1 1 1 1 1 0 1 1 0 0 1 4 0 0 20 0 2182.1205 P60228 P60228 388 407 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 2.062E-06 209.56 By MS/MS 7 1.41 3 2 1 6 29584000 29584000 0 8221 1090 8488;8489 20346;20347;20348;20349;20350;20351 16378;16379;16380;16381;16382 16382 608 5 235010 0 LGIEKTDPTTLTDEEINR GVRRFSDIQIRRLKRLGIEKTDPTTLTDEE EKTDPTTLTDEEINRFARLDIDPETITWQR R L G N R F 0 1 1 2 0 0 3 1 0 2 2 1 0 0 1 0 4 0 0 0 0 0 18 1 2044.0324 P11586 P11586 500 517 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 1.6894E-16 287.48 By MS/MS 4.33 0.471 2 1 3 6066000 6066000 0 8222 582 8490 20352;20353;20354 16383;16384 16384 2 554670 0 LGIGQLTAQEVK THTTVIHQLDKALAKLGIGQLTAQEVKSAC LAKLGIGQLTAQEVKSACYLRGLNSTHIGE K L G V K S 1 0 0 0 0 2 1 2 0 1 2 1 0 0 0 0 1 0 0 1 0 0 12 0 1255.7136 Q6P1Q0 Q6P1Q0 293 304 LETMD1 LETM1 domain-containing protein 1 yes yes 2 7.4125E-07 201.09 By MS/MS 8 0 1 1 1459100 1459100 0 8223 1702 8491 20355 16385 16385 1 18420 0 LGIGQSQEMNTLFR VYHKYRRRCLNERKRLGIGQSQEMNTLFRF RLGIGQSQEMNTLFRFWSFFLRDHFNKKMY R L G F R F 0 1 1 0 0 2 1 2 0 1 2 0 1 1 0 1 1 0 0 0 0 0 14 0 1592.7981 Q6PKG0;Q659C4 Q6PKG0 904 917 LARP1;LARP1B La-related protein 1;La-related protein 1B yes no 2 1.7195E-07 216.91 By MS/MS 3 0 1 1 266240 266240 0 8224 1722 8492 20356 16386 16386 917 1 4871.5 0 LGIHEDSQNR ENYKKFYEQFSKNIKLGIHEDSQNRKKLSE SKNIKLGIHEDSQNRKKLSELLRYYTSASG K L G N R K 0 1 1 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1167.5632 P07900 P07900 447 456 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.00074222 128.6 By MS/MS By matching 4.33 0.471 2 1 2 1 13194000 12994000 199880 8225 513 8493 20357;20358;20359 16387;16388 16387 2 1128800 425870 LGIHEDSQNRK ENYKKFYEQFSKNIKLGIHEDSQNRKKLSE KNIKLGIHEDSQNRKKLSELLRYYTSASGD K L G R K K 0 1 1 1 0 1 1 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1295.6582 P07900 P07900 447 457 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 0.00083345 122.94 By MS/MS 4.33 0.471 2 1 3 4567100 4567100 0 8226 513 8494 20360;20361;20362 16389;16390;16391 16390 3 400950 0 LGIHEDSTNR ENYKKFYEAFSKNLKLGIHEDSTNRRRLSE SKNLKLGIHEDSTNRRRLSELLRYHTSQSG K L G N R R 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1140.5523 P08238 P08238 439 448 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 0.0013605 137.05 By MS/MS By matching 4.27 1.71 1 1 1 3 2 2 1 10 1 51858000 51781000 77381 8227 521 8495 20363;20364;20365;20366;20367;20368;20369;20370;20371;20372;20373 16392;16393;16394;16395;16396 16396 5 4109300 164870 LGINKTDPSTLTEEEVSK GVREFSEIQLARLKKLGINKTDPSTLTEEE NKTDPSTLTEEEVSKFARLDIDPSTITWQR K L G S K F 0 0 1 1 0 0 3 1 0 1 2 2 0 0 1 2 3 0 0 1 0 0 18 1 1960.0001 Q6UB35 Q6UB35 543 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 2.4178E-56 339.48 By MS/MS 4.33 0.471 2 1 3 7617900 7617900 0 8228 1728 8496 20374;20375;20376 16397;16398;16399 16398 3 656990 0 LGIPDAVSYIK FFRQNGYLEFDALSRLGIPDAVSYIKKRYK ALSRLGIPDAVSYIKKRYKTTQLLFLKAAC R L G I K K 1 0 0 1 0 0 0 1 0 2 1 1 0 0 1 1 0 0 1 1 0 0 11 0 1174.6598 O94874 O94874 275 285 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.047348 71.349 By MS/MS 5.5 1.12 1 1 1 1 4 7957200 7957200 0 8229 372 8497 20377;20378;20379;20380 16400 16400 1 626430 0 LGITHVLNAAEGR VGNASVAQDIPKLQKLGITHVLNAAEGRSF QKLGITHVLNAAEGRSFMHVNTNANFYKDS K L G G R S 2 1 1 0 0 0 1 2 1 1 2 0 0 0 0 0 1 0 0 1 0 0 13 0 1349.7415 P51452 P51452 54 66 DUSP3 Dual specificity protein phosphatase 3 yes yes 3 0.014867 120.53 By MS/MS 9 0 1 1 458140 458140 0 8230 994 8498 20381 16401 16401 1 9016.3 0 LGIYEAMK SSCIAGIYNETTKQKLGIYEAMKIGLVRPG NETTKQKLGIYEAMKIGLVRPGTALELLEA K L G M K I 1 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 8 0 923.47864 P15924 P15924 2272 2279 DSP Desmoplakin yes yes 2 0.065737 98.523 By MS/MS 3 0 1 1 0 0 0 8231 628 8499 20382 16402 16402 1 0 0 LGIYTVLFER LSAGLLRQATYTTTRLGIYTVLFERLTGAD YTTTRLGIYTVLFERLTGADGTPPGFLLKA R L G E R L 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 0 1 0 1 1 0 0 10 0 1209.6758 Q02978 Q02978 99 108 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 3.236E-05 155.84 By MS/MS 7.5 0.5 1 1 2 1519400 1519400 0 8232 1284 8500 20383;20384 16403 16403 1 19282 0 LGKDAVEDLESVGK KGLDGAKKAVGGLGKLGKDAVEDLESVGKG KLGKDAVEDLESVGKGAVHDVKDVLDSVL_ K L G G K G 1 0 0 2 0 0 2 2 0 0 2 2 0 0 0 1 0 0 0 2 0 0 14 1 1458.7566 P81605 P81605 83 96 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 2 6.5455E-14 226.42 By matching By MS/MS 5.67 3.09 1 1 1 1 2 1730800 685400 1045400 8233 1228 8501 20385;20386;20387 16404;16405 16404 2 64500 251620 LGKHDVTCTVSGGGR QDREQLMFPFHFVDRLGKHDVTCTVSGGGR LGKHDVTCTVSGGGRSAQAGAIRLAMAKAL R L G G R S 0 1 0 1 1 0 0 4 1 0 1 1 0 0 0 1 2 0 0 2 0 0 15 1 1542.7573 P82933 P82933 323 337 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 0.00052682 179.83 By MS/MS 7.33 0.471 2 1 3 6532200 6532200 0 8234 1239 8502 20388;20389;20390 16406;16407 16406 2 101470 0 LGLDYEER LSRPNAQELPSMYQRLGLDYEERVLPSIVN LPSMYQRLGLDYEERVLPSIVNEVLKSVVA R L G E R V 0 1 0 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 993.47673 Q99623 Q99623 124 131 PHB2 Prohibitin-2 yes yes 2 0.0064572 128.61 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 89241000 88137000 1103400 8235 2254 8503 20391;20392;20393;20394;20395;20396 16408;16409;16410;16411;16412 16411 5 1240500 1758700 LGLEALAANHQQLFTDGR ALETERVRANARALRLGLEALAANHQQLFT EALAANHQQLFTDGRSWGSFTVLDNSAWYQ R L G G R S 3 1 1 1 0 2 1 2 1 0 4 0 0 1 0 0 1 0 0 0 0 0 18 0 1953.0068 Q9Y2Z4 Q9Y2Z4 146 163 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 3 0.00026587 128.45 By MS/MS 7 0 1 1 646570 646570 0 8236 2852 8504 20397 16413 16413 1 10150 0 LGLELGK SGSSHQDLSQKIADRLGLELGKVVTKKFSN LSQKIADRLGLELGKVVTKKFSNQETCVEI R L G G K V 0 0 0 0 0 0 1 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 728.44324 P60891;P21108;P11908 P60891 23 29 PRPS1;PRPS1L1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 3;Ribose-phosphate pyrophosphokinase 2 yes no 2 0.022145 110.63 By MS/MS 7.5 0.5 1 1 2 1007600 1007600 0 8237 585 8505 20398;20399 16414 16414 1 13209 0 LGLENAEALIR CFGSEGGTYYIKEQKLGLENAEALIRLIED KEQKLGLENAEALIRLIEDGRGCEVIQEIK K L G I R L 2 1 1 0 0 0 2 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1197.6717 P10155 P10155 53 63 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 2 2.3366E-05 180.09 By MS/MS 6.5 0.5 1 1 2 2137800 2137800 0 8238 556 8506 20400;20401 16415 16415 1 16852 0 LGLGEGAEEK SEGKAYSLGRAEYGRLGLGEGAEEKSIPTL AEYGRLGLGEGAEEKSIPTLISRLPAVSSV R L G E K S 1 0 0 0 0 0 3 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1001.5029 P18754 P18754 326 335 RCC1 Regulator of chromosome condensation yes yes 2 0.033621 76.1 By MS/MS By matching 6.33 0.471 2 1 2 1 12907000 12820000 86474 8239 655 8507 20402;20403;20404 16416 16416 1 95902 88611 LGLGTAYIHGMK IYGSDRILLRPREKKLGLGTAYIHGMKHAT EKKLGLGTAYIHGMKHATGNYIIIMDADLS K L G M K H 1 0 0 0 0 0 0 3 1 1 2 1 1 0 0 0 1 0 1 0 0 0 12 0 1259.6696 O60762 O60762 96 107 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0019452 112.3 By MS/MS 8 0 2 2 2627900 2627900 0 8240 275 8508;8509 20405;20406 16417;16418 16417 121 2 33176 0 LGLLALACSDGK WELPGTPRKAPLLPRLGLLALACSDGKVLL LPRLGLLALACSDGKVLLFSLPHPEALLAQ R L G G K V 2 0 0 1 1 0 0 2 0 0 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1216.6486 Q8WUA4 Q8WUA4 496 507 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 0.00012986 155.06 By MS/MS 4 0.816 1 1 1 3 1838300 1838300 0 8241 2014 8510 20407;20408;20409 16419 16419 1 148010 0 LGLLGLPAPK SYVKQMERESREHLRLGLLGLPAPKNDFEI REHLRLGLLGLPAPKNDFEIVLPENAEKEL R L G P K N 1 0 0 0 0 0 0 2 0 0 4 1 0 0 2 0 0 0 0 0 0 0 10 0 977.62735 Q99459 Q99459 478 487 CDC5L Cell division cycle 5-like protein yes yes 2 9.8784E-05 154.01 By MS/MS 4.5 0.5 1 1 2 1425600 1425600 0 8242 2245 8511 20410;20411 16420;16421 16420 2 106350 0 LGLPGDEVDNK RAPLKSVGPDFGKKRLGLPGDEVDNKVKGA GKKRLGLPGDEVDNKVKGAAGRTDLLRLRR R L G N K V 0 0 1 2 0 0 1 2 0 0 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1155.5772 P78527 P78527 2705 2715 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.014185 99.53 By MS/MS 1 0 1 1 0 0 0 8243 1225 8512 20412 16422 16422 1 0 0 LGLPGDEVDNKVK RAPLKSVGPDFGKKRLGLPGDEVDNKVKGA KRLGLPGDEVDNKVKGAAGRTDLLRLRRRF R L G V K G 0 0 1 2 0 0 1 2 0 0 2 2 0 0 1 0 0 0 0 2 0 0 13 1 1382.7405 P78527 P78527 2705 2717 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0022649 135.8 By MS/MS 2.17 1.07 2 2 1 1 6 7839400 7839400 0 8244 1225 8513 20413;20414;20415;20416;20417;20418 16423;16424;16425;16426;16427;16428 16425 6 1985900 0 LGLPLLLMPEEAR RTVGALPRGPRQNSRLGLPLLLMPEEARLL SRLGLPLLLMPEEARLLAEIGAVTLVSAPR R L G A R L 1 1 0 0 0 0 2 1 0 0 5 0 1 0 2 0 0 0 0 0 0 0 13 0 1450.8218 Q9BSV6 Q9BSV6 46 58 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 2 0.0053408 102.06 By MS/MS 7 0 1 1 72034 72034 0 8245 2311 8514 20419 16429;16430;16431 16430 1069 3 1130.8 0 LGLQHLR QDMPNAMPVSELTDKLGLQHLRSRTWYVQA PVSELTDKLGLQHLRSRTWYVQATCATQGT K L G L R S 0 1 0 0 0 1 0 1 1 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 835.50282 P84085 P84085 143 149 ARF5 ADP-ribosylation factor 5 yes yes 2 0.041523 96.048 By MS/MS 9.5 0.5 1 1 2 1044100 1044100 0 8246 1244 8515 20420;20421 16432 16432 1 25794 0 LGLQLNSLGPEACK AGLRTLLPVFLRARKLGLQLNSLGPEACKD KLGLQLNSLGPEACKDLRDLLLHDQCQITT K L G C K D 1 0 1 0 1 1 1 2 0 0 4 1 0 0 1 1 0 0 0 0 0 0 14 0 1498.7814 Q86UT6 Q86UT6 755 768 NLRX1 NLR family member X1 yes yes 2 1.5527E-16 254.07 By MS/MS 4 0 1 1 726140 726140 0 8247 1825 8516 20422 16433 16433 1 68334 0 LGLQNDLFSLAR LLPGIRDLSLPPVDRLGLQNDLFSLARAGI VDRLGLQNDLFSLARAGIISTVEVLKVMEA R L G A R A 1 1 1 1 0 1 0 1 0 0 4 0 0 1 0 1 0 0 0 0 0 0 12 0 1345.7354 P55786 P55786 616 627 NPEPPS Puromycin-sensitive aminopeptidase yes yes 2 0.00097012 125.72 By MS/MS 4 0 1 1 99322 99322 0 8248 1062 8517 20423 16434;16435 16434 2 9346.9 0 LGLQSLR QDLPNAMAISEMTDKLGLQSLRNRTWYVQA AISEMTDKLGLQSLRNRTWYVQATCATQGT K L G L R N 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 785.47594 P18085 P18085 143 149 ARF4 ADP-ribosylation factor 4 yes yes 2 0.0055896 153.15 By MS/MS 9.5 0.5 1 1 2 8563600 8563600 0 8249 651 8518 20424;20425 16436;16437 16437 2 226060 0 LGLTEDQFIR NLCYTTLLRPGTAQKLGLTEDQFIRTPTGD GTAQKLGLTEDQFIRTPTGDEFVKTSVRKG K L G I R T 0 1 0 1 0 1 1 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 10 0 1190.6295 P28340 P28340 630 639 POLD1 DNA polymerase delta catalytic subunit yes yes 2 1.5008E-10 213.53 By MS/MS 3.5 0.5 1 1 2 1297300 1297300 0 8250 754 8519 20426;20427 16438;16439 16438 2 80962 0 LGLVGVNLTLDGVK NLVVKPDQLIKRRGKLGLVGVNLTLDGVKS KLGLVGVNLTLDGVKSWLKPRLGQEATVGK K L G V K S 0 0 1 1 0 0 0 3 0 0 4 1 0 0 0 0 1 0 0 3 0 0 14 0 1396.829 P53396 P53396 69 82 ACLY ATP-citrate synthase yes yes 2 0.00015713 176.32 By MS/MS 4 0 1 1 213370 213370 0 8251 1030 8520 20428 16440 16440 1 20080 0 LGMIVAEVVSAR GVKCRLDSSLPPVRRLGMIVAEVVSARIHP VRRLGMIVAEVVSARIHPEGPPLKFQYEED R L G A R I 2 1 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 3 0 0 12 0 1243.6958 Q9Y4R8 Q9Y4R8 405 416 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.00041169 135.86 By MS/MS 4 0 1 1 855330 855330 0 8252 2900 8521 20429 16441 16441 1207 1 80492 0 LGMLSPEGTCK INVLLKPNTSVQFLRLGMLSPEGTCKAFDT QFLRLGMLSPEGTCKAFDTAGNGYCRSEGV R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 P49327 P49327 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0010299 120.31 By MS/MS 2.5 1.12 2 2 2 2 8 11252000 11252000 0 8253 946 8522;8523 20430;20431;20432;20433;20434;20435;20436;20437 16442;16443;16444;16445;16446;16447 16444 505 6 2972700 0 LGNDFHTNK VKKAARVIIEKYYTRLGNDFHTNKRVCEEI EKYYTRLGNDFHTNKRVCEEIAIIPSKKLR R L G N K R 0 0 2 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1044.4989 P08708 P08708 24 32 RPS17 40S ribosomal protein S17 yes yes 2 0.0011886 131.62 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 10396000 10360000 36203 8254 527 8524 20438;20439;20440 16448;16449 16449 2 372270 82553 LGNDFHTNKR VKKAARVIIEKYYTRLGNDFHTNKRVCEEI KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN R L G K R V 0 1 2 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 10 1 1200.6 P08708 P08708 24 33 RPS17 40S ribosomal protein S17 yes yes 2 4.9924E-10 212.03 By MS/MS 9.5 0.5 1 1 2 11031000 11031000 0 8255 527 8525 20441;20442 16450;16451 16450 2 349380 0 LGNFFSPK TELEEGLRNGVYLAKLGNFFSPKVVSLKKI NGVYLAKLGNFFSPKVVSLKKIYDREQTRY K L G P K V 0 0 1 0 0 0 0 1 0 0 1 1 0 2 1 1 0 0 0 0 0 0 8 0 908.4756 P46940 P46940 81 88 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.0064572 118.74 By MS/MS 2 0 1 1 279850 279850 0 8256 922 8526 20443 16452 16452 1 94655 0 LGNIEFKPESR HEAESVLAVVAAVLKLGNIEFKPESRVNGL AVLKLGNIEFKPESRVNGLDESKIKDKNEL K L G S R V 0 1 1 0 0 0 2 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 11 1 1288.6776 O43795 O43795 281 291 MYO1B Unconventional myosin-Ib yes yes 2 0.031328 86.014 By MS/MS 3 0 1 1 478720 478720 0 8257 235 8527 20444 16453 16453 1 8759.2 0 LGNPIVPLNIR VPRDLPSWMKFLHGKLGNPIVPLNIRLFLA LHGKLGNPIVPLNIRLFLAKLVINTEEVFR K L G I R L 0 1 2 0 0 0 0 1 0 2 2 0 0 0 2 0 0 0 0 1 0 0 11 0 1204.7292 P78527 P78527 2133 2143 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0012616 116.37 By MS/MS 2.5 1.12 1 1 1 1 4 2378000 2378000 0 8258 1225 8528 20445;20446;20447;20448 16454;16455 16455 2 714050 0 LGNQNVETK IPSETLRGASVFQVKLGNQNVETKQLLSAS SVFQVKLGNQNVETKQLLSASYEFQREFTQ K L G T K Q 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5142 Q8WWC4 Q8WWC4 250 258 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00060852 143.37 By MS/MS By matching 8.5 0.5 1 1 1 1 8928900 8878900 49997 8259 2034 8529 20449;20450 16456 16456 1 174740 67468 LGNTFTFR AALDGPLDAALDHLRLGNTFTFRVTVLQAS AALDHLRLGNTFTFRVTVLQASSISAEYAD R L G F R V 0 1 1 0 0 0 0 1 0 0 1 0 0 2 0 0 2 0 0 0 0 0 8 0 954.49232 Q12756 Q12756 996 1003 KIF1A Kinesin-like protein KIF1A yes yes 2 0.013368 107.01 By MS/MS 2.5 0.5 1 1 2 308180 308180 0 8260 1324 8530 20451;20452 16457 16457 1 81602 0 LGPAGTTILGNSK DLKLPPANWLRESAKLGPAGTTILGNSKKS AKLGPAGTTILGNSKKSKPFSSFGMAYDFI K L G S K K 1 0 1 0 0 0 0 3 0 1 2 1 0 0 1 1 2 0 0 0 0 0 13 0 1227.6823 Q3B7T1 Q3B7T1 87 99 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.00023977 158.56 By MS/MS 3 0 1 1 268720 268720 0 8261 1574 8531 20453 16458 16458 1 4916.9 0 LGPDSLALALDR SDAAAPARFLEAGSRLGPDSLALALDRAVG GSRLGPDSLALALDRAVGGRRPSAPMTREE R L G D R A 2 1 0 2 0 0 0 1 0 0 4 0 0 0 1 1 0 0 0 0 0 0 12 0 1239.6823 Q6ZTW0 Q6ZTW0 247 258 TPGS1 Tubulin polyglutamylase complex subunit 1 yes yes 2 0.0013363 118.9 By MS/MS 8 0 1 1 195060 195060 0 8262 1747 8532 20454 16459 16459 1 2462.6 0 LGPEGELLIR GLVVFAIVFGVALRKLGPEGELLIRFFNSF VALRKLGPEGELLIRFFNSFNEATMVLVSW K L G I R F 0 1 0 0 0 0 2 2 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1095.6288 Q15758 Q15758 248 257 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.00098745 123.86 By MS/MS 5.38 3.04 1 1 1 1 1 1 1 1 8 12147000 12147000 0 8263 1530 8533 20455;20456;20457;20458;20459;20460;20461;20462 16460;16461;16462;16463;16464;16465;16466 16460 7 428550 0 LGPETGLLFPR LPRFYGHPCPFEGRRLGPETGLLFPRLDQS EGRRLGPETGLLFPRLDQSRTWLVKAHRT_ R L G P R L 0 1 0 0 0 0 1 2 0 0 3 0 0 1 2 0 1 0 0 0 0 0 11 0 1198.671 Q96GW9 Q96GW9 569 579 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 0.00066425 128.28 By MS/MS 7.5 1.5 1 1 2 1619800 1619800 0 8264 2162 8534 20463;20464 16467;16468 16467 1 11740 0 LGPFLLNAVR RVVVTGHKVLFTVGKLGPFLLNAVRWLDGG FTVGKLGPFLLNAVRWLDGGRRGKVVVQTE K L G V R W 1 1 1 0 0 0 0 1 0 0 3 0 0 1 1 0 0 0 0 1 0 0 10 0 1098.655 Q9Y4C2 Q9Y4C2 282 291 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.00024057 144.38 By MS/MS 4 0 1 1 174050 174050 0 8265 2891 8535 20465 16469 16469 1 16379 0 LGPLAFYK GEYQGVFHCAVETAKLGPLAFYKGLVPAGI CAVETAKLGPLAFYKGLVPAGIRLIPHTVL K L G Y K G 1 0 0 0 0 0 0 1 0 0 2 1 0 1 1 0 0 0 1 0 0 0 8 0 907.51674 Q9UBX3 Q9UBX3 247 254 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.023239 96.048 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 13632000 13632000 0 8266 2709 8536 20466;20467;20468;20469;20470;20471 16470;16471;16472 16471 3 363800 0 LGPLLDILADSR LFPLLLRLLDPTSSRLGPLLDILADSRHLW SSRLGPLLDILADSRHLWSPFGLRSLAASS R L G S R H 1 1 0 2 0 0 0 1 0 1 4 0 0 0 1 1 0 0 0 0 0 0 12 0 1281.7293 Q13724 Q13724 709 720 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.00036297 139.86 By MS/MS 6 1.41 1 1 1 1 1 5 449750 449750 0 8267 1408 8537 20472;20473;20474;20475;20476 16473;16474;16475;16476;16477 16476 5 20683 0 LGPLLLDPSLAVR RPALPGLARRDAVRRLGPLLLDPSLAVRET RRLGPLLLDPSLAVRETAAGALRNLSACGG R L G V R E 1 1 0 1 0 0 0 1 0 0 5 0 0 0 2 1 0 0 0 1 0 0 13 0 1362.8235 Q7Z4Q2 Q7Z4Q2 84 96 HEATR3 HEAT repeat-containing protein 3 yes yes 2 0.0090264 91.636 By MS/MS 6 0.816 1 1 1 3 861180 861180 0 8268 1794 8538 20477;20478;20479 16478;16479 16478 2 8877.1 0 LGPNDQYK PDVCWDRNNPEPWNKLGPNDQYKFYSVNVD NPEPWNKLGPNDQYKFYSVNVDYSKLKKER K L G Y K F 0 0 1 1 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 8 0 933.4556 O00483 O00483 56 63 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.0046706 127.02 By MS/MS By matching 10 0 2 1 1 8214100 8162400 51681 8269 109 8539 20480;20481 16480 16480 1 439920 66166 LGQALTEVYAK DSISETVILRGEPEKLGQALTEVYAKANSF EPEKLGQALTEVYAKANSFTVSSVAAPSWL K L G A K A 2 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 1 1 0 0 11 0 1191.6499 Q00341 Q00341 350 360 HDLBP Vigilin yes yes 2 7.378E-07 194.12 By MS/MS 3 0.816 1 1 1 3 2324600 2324600 0 8270 1260 8540 20482;20483;20484 16481;16482 16481 2 98681 0 LGQEATVGK VNLTLDGVKSWLKPRLGQEATVGKATGFLK SWLKPRLGQEATVGKATGFLKNFLIEPFVP R L G G K A 1 0 0 0 0 1 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 901.4869 P53396 P53396 89 97 ACLY ATP-citrate synthase yes yes 2 0.0016533 125.71 By MS/MS 2.6 1.02 1 1 2 1 5 21124000 21124000 0 8271 1030 8541 20485;20486;20487;20488;20489 16483;16484 16484 2 2001400 0 LGQHVVGMAPLSVGSLDDEPGGEAETK ETSEQKTNLEDVGRRLGQHVVGMAPLSVGS VGSLDDEPGGEAETKMLSQPYLLDPSITLG R L G T K M 2 0 0 2 0 1 3 5 1 0 3 1 1 0 2 2 1 0 0 3 0 0 27 0 2692.3014 P43897 P43897 256 282 TSFM Elongation factor Ts, mitochondrial yes yes 3 1.2178E-13 187.18 By MS/MS 8 0 1 1 2113200 2113200 0 8272 901 8542 20490 16485 16485 476 1 26679 0 LGQLLLSAK NYLAADGKSTTWSVRLGQLLLSAKKRDITA TTWSVRLGQLLLSAKKRDITAFYDSLKLVR R L G A K K 1 0 0 0 0 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 9 0 941.59097 Q13535 Q13535 1804 1812 ATR Serine/threonine-protein kinase ATR yes yes 2 0.0097535 99.815 By MS/MS 2 0 1 1 167400 167400 0 8273 1395 8543 20491 16486 16486 1 56621 0 LGSAVVTR AHRSELKHAKRIVVKLGSAVVTRGDECGLA AKRIVVKLGSAVVTRGDECGLALGRLASIV K L G T R G 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 2 0 0 8 0 801.47085 P54886 P54886 77 84 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0045756 127.46 By MS/MS 5 0 1 1 8411700 8411700 0 8274 1048 8544 20492 16487 16487 1 84365 0 LGSAVVTRGDECGLALGR AHRSELKHAKRIVVKLGSAVVTRGDECGLA AVVTRGDECGLALGRLASIVEQVSVLQNQG K L G G R L 2 2 0 1 1 0 1 4 0 0 3 0 0 0 0 1 1 0 0 2 0 0 18 1 1829.9418 P54886 P54886 77 94 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.00084607 193.96 By MS/MS 5 0 2 2 1172700 1172700 0 8275 1048 8545 20493;20494 16488;16489 16488 2 11762 0 LGSIAIQGAIEK IGSFLGSLSLLPATKLGSIAIQGAIEKAGI ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN K L G E K A 2 0 0 0 0 1 1 2 0 3 1 1 0 0 0 1 0 0 0 0 0 0 12 0 1198.6921 P24752 P24752 67 78 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 6.7802E-05 175.74 By MS/MS By MS/MS 7 0 2 1 1 200440 53995 146450 8276 716 8546 20495;20496 16490;16491 16491 2 847.62 263750 LGSLVDEFK AVDLTLPKVEAMNKRLGSLVDEFKELVYPP EAMNKRLGSLVDEFKELVYPPDYNPEGKVT R L G F K E 0 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1006.5335 P12956 P12956 518 526 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.00081181 137.13 By MS/MS 5 0 1 1 1207400 1207400 0 8277 596 8547 20497 16492 16492 1 12110 0 LGSLVENNER EPTAQQNLALQLAEKLGSLVENNERVFDHK QLAEKLGSLVENNERVFDHKQGTYGGYFRD K L G E R V 0 1 2 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1129.5728 Q99613;B5ME19 Q99613 863 872 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 2.1404E-10 205.59 By MS/MS By MS/MS 4.92 2.81 2 1 1 3 1 1 1 1 1 1 11 2 71747000 71268000 479340 8278 2252 8548 20498;20499;20500;20501;20502;20503;20504;20505;20506;20507;20508;20509;20510 16493;16494;16495;16496;16497;16498;16499;16500;16501;16502 16497 10 5535300 967400 LGSLVENNERVFDHK EPTAQQNLALQLAEKLGSLVENNERVFDHK LGSLVENNERVFDHKQGTYGGYFRDQKDGY K L G H K Q 0 1 2 1 0 0 2 1 1 0 2 1 0 1 0 1 0 0 0 2 0 0 15 1 1755.8904 Q99613;B5ME19 Q99613 863 877 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.026877 68.83 By MS/MS 4 0 1 1 3619200 3619200 0 8279 2252 8549 20511 16503 16503 1 340590 0 LGSQIFVK VLLMKSRANEEYGLRLGSQIFVKEMTRTGL NEEYGLRLGSQIFVKEMTRTGLATKDGNLH R L G V K E 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 8 0 890.52255 Q9UDY2 Q9UDY2 323 330 TJP2 Tight junction protein ZO-2 yes yes 2 0.036301 87.696 By MS/MS 3.5 0.5 1 1 2 783630 783630 0 8280 2712 8550 20512;20513 16504 16504 1 32273 0 LGSSCSGSGDSGR GHESNSTQSRIREQKLGSSCSGSGDSGRRS QKLGSSCSGSGDSGRRSHACGYSNSSGCGR K L G G R R 0 1 0 1 1 0 0 4 0 0 1 0 0 0 0 5 0 0 0 0 0 0 13 0 1225.4993 CON__Q5D862;Q5D862 CON__Q5D862 263 275 FLG2 Filaggrin-2 yes no 2 0.044435 86.344 By MS/MS 5 1 1 1 2 58187 0 58187 + 8281 67 8551 20514;20515 16505;16506 16505 2 0 94084 LGSSGLGSASSIQAAVR DDTRRANKKAKQTGRLGSSGLGSASSIQAA SSGLGSASSIQAAVRQLEAEADAIIQMVRE R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00045498 194.3 By MS/MS 1.5 0.5 1 1 2 580970 580970 0 8282 1802 8552 20516;20517 16507 16507 1 173940 0 LGSTDLCYIAAVK ASALKRMSVLASYEKLGSTDLCYIAAVKGA EKLGSTDLCYIAAVKGAPETLHSMFSQCPP K L G V K G 2 0 0 1 1 0 0 1 0 1 2 1 0 0 0 1 1 0 1 1 0 0 13 0 1409.7225 Q9HD20 Q9HD20 642 654 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.011854 102.53 By MS/MS 1.5 0.5 1 1 2 653960 653960 0 8283 2517 8553 20518;20519 16508;16509 16508 2 191100 0 LGSTEVASNVPK APGMNTIDQGMAALKLGSTEVASNVPKVVG ALKLGSTEVASNVPKVVGSAVGSGSITSNI K L G P K V 1 0 1 0 0 0 1 1 0 0 1 1 0 0 1 2 1 0 0 2 0 0 12 0 1200.635 Q9Y5A9 Q9Y5A9 194 205 YTHDF2 YTH domain-containing family protein 2 yes yes 2 1.214E-06 178.46 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 8642400 8642400 0 8284 2908 8554 20520;20521;20522 16510;16511 16510 2 82226 0 LGSTVFVANLDYK PNIPNEIIHALQAGRLGSTVFVANLDYKVG GRLGSTVFVANLDYKVGWKKLKEVFSMAGV R L G Y K V 1 0 1 1 0 0 0 1 0 0 2 1 0 1 0 1 1 0 1 2 0 0 13 0 1425.7504 P52272 P52272 202 214 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 4.0372E-05 179.94 By MS/MS 5.5 0.5 1 1 2 2727400 2727400 0 8285 1012 8555 20523;20524 16512 16512 1 26184 0 LGSVDSFER LENIFSRGANRMRGRLGSVDSFERSNSLAS NRMRGRLGSVDSFERSNSLASEKDYSPGDS R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes yes 2 0.0010987 132.76 By MS/MS 3 0 1 1 548140 548140 0 8286 256 8556 20525 16513;16514 16513 2 10030 0 LGSVSLDLCDGDTGEPR QQYAWLCSQLRRKARLGSVSLDLCDGDTGE SVSLDLCDGDTGEPRYTLHVVDSPTVKPSR R L G P R Y 0 1 0 3 1 0 1 3 0 0 3 0 0 0 1 2 1 0 0 1 0 0 17 0 1789.8152 Q8N6R0 Q8N6R0 265 281 METTL13 Methyltransferase-like protein 13 yes yes 2 0.0053389 113.54 By MS/MS 5 0 1 1 800780 800780 0 8287 1929 8557 20526 16515 16515 1 8031.4 0 LGTDEISPR DNYPQSVPRLFISTRLGTDEISPRVLQALG LFISTRLGTDEISPRVLQALGSEPIQYAVP R L G P R V 0 1 0 1 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 9 0 986.50327 O00159 O00159 901 909 MYO1C Unconventional myosin-Ic yes yes 2 0.034525 82.645 By MS/MS By matching 4.33 0.471 2 1 2 1 3552600 3515400 37185 8288 85 8558 20527;20528;20529 16516 16516 1 315960 79230 LGTECFLAQMR DGTATFVDLVPGFRRLGTECFLAQMRAQKG GFRRLGTECFLAQMRAQKGELLERLSSARN R L G M R A 1 1 0 0 1 1 1 1 0 0 2 0 1 1 0 0 1 0 0 0 0 0 11 0 1324.6268 O43264 O43264 584 594 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 2.5645E-09 214.96 By MS/MS 4 0 2 2 2325300 2325300 0 8289 200 8559;8560 20530;20531 16517;16518 16518 100 2 218820 0 LGTEPTSETQDELQR PEMEDLPSKGVQEERLGTEPTSETQDELQR LGTEPTSETQDELQRLLGLLRDQDPLSEEQ R L G Q R L 0 1 0 1 0 2 3 1 0 0 2 0 0 0 1 1 3 0 0 0 0 0 15 0 1702.801 O15381 O15381 516 530 NVL Nuclear valosin-containing protein-like yes yes 2 2.3595E-56 355.39 By MS/MS 4.5 0.5 1 1 2 1600400 1600400 0 8290 187 8561 20532;20533 16519 16519 1 130950 0 LGTGFNPNTLDK SYTEDWAIVIRKYHKLGTGFNPNTLDKQKE YHKLGTGFNPNTLDKQKERQKGLPKQVFES K L G D K Q 0 0 2 1 0 0 0 2 0 0 2 1 0 1 1 0 2 0 0 0 0 0 12 0 1275.6459 Q96N67 Q96N67 134 145 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 5.9319E-05 171.67 By MS/MS 3.5 1.12 1 1 1 1 4 5025000 5025000 0 8291 2201 8562 20534;20535;20536;20537 16520;16521 16520 2 1135200 0 LGTLSPAFSTR FYIDYGNREVLPSTRLGTLSPAFSTRVLPA PSTRLGTLSPAFSTRVLPAQATEYAFAFIQ R L G T R V 1 1 0 0 0 0 0 1 0 0 2 0 0 1 1 2 2 0 0 0 0 0 11 0 1148.619 Q7KZF4 Q7KZF4 777 787 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.021581 84.817 By MS/MS By matching 4 0 2 1 1 9777900 9717400 60523 8292 1755 8563 20538;20539 16522 16522 1 914470 128960 LGTPQQIAIAR ESKYAPLHLVPLIERLGTPQQIAIAREGDL LIERLGTPQQIAIAREGDLLTKERLCCGLS R L G A R E 2 1 0 0 0 2 0 1 0 2 1 0 0 0 1 0 1 0 0 0 0 0 11 0 1166.6772 Q7L576;Q96F07 Q7L576 1066 1076 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.005702 102.06 By MS/MS 3.5 0.5 1 1 2 1792600 1792600 0 8293 1763 8564 20540;20541 16523 16523 1 57307 0 LGTPVLQALGDGDFVK TDSAYVVASMRIMTRLGTPVLQALGDGDFV GTPVLQALGDGDFVKCLHSVGQPLTGQGEP R L G V K C 1 0 0 2 0 1 0 3 0 0 3 1 0 1 1 0 1 0 0 2 0 0 16 0 1628.8774 Q16822 Q16822 194 209 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 8.4306E-11 260.5 By MS/MS 5.5 0.5 2 2 4 9713600 9713600 0 8294 1560 8565 20542;20543;20544;20545 16524;16525;16526 16524 2 82054 0 LGTQTFCSR KGLIEGKSDPYALVRLGTQTFCSRVIDEEL PYALVRLGTQTFCSRVIDEELNPQWGETYE R L G S R V 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 1068.5022 Q9BSJ8 Q9BSJ8 364 372 ESYT1 Extended synaptotagmin-1 yes yes 2 0.0025078 114.86 By MS/MS 3.5 0.5 1 1 2 4420700 4420700 0 8295 2308 8566 20546;20547 16527 16527 1 177800 0 LGTSESLPCTAEELSR RRLSSTSLASGHSVRLGTSESLPCTAEELS GTSESLPCTAEELSRSTTELLPRRPPSSSS R L G S R S 1 1 0 0 1 0 3 1 0 0 3 0 0 0 1 3 2 0 0 0 0 0 16 0 1748.8251 Q9BZL6 Q9BZL6 209 224 PRKD2 Serine/threonine-protein kinase D2 yes yes 2 0.00049487 151.16 By MS/MS 4 0 1 1 914570 914570 0 8296 2383 8567 20548 16528 16528 1 86068 0 LGTSGLNQPTFQQSK LGLPAVNNDPFVQRKLGTSGLNQPTFQQSK LGTSGLNQPTFQQSKMKPSDLSQVWPEANQ K L G S K M 0 0 1 0 0 3 0 2 0 0 2 1 0 1 1 2 2 0 0 0 0 0 15 0 1604.8158 A5YKK6 A5YKK6 809 823 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00039375 140.01 By MS/MS 2 0 1 1 734390 734390 0 8297 19 8568 20549 16529 16529 1 248400 0 LGVEQLR YETRFLCNSSQEWKRLGVEQLRLSTVDMTG NSSQEWKRLGVEQLRLSTVDMTGIPTLDNL R L G L R L 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 813.47085 Q8WUK0 Q8WUK0 90 96 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.0067708 148.33 By MS/MS By matching 4.88 2.71 1 1 1 1 1 1 1 1 4 4 12984000 9754000 3230400 8298 2016 8569 20550;20551;20552;20553;20554;20555;20556;20557 16530 16530 1 168990 1704700 LGVLHVGQKLEEQDEFEK QSLLARRSLQAQLQRLGVLHVGQKLEEQDE LHVGQKLEEQDEFEKIYKNAWADNANACAK R L G E K I 0 0 0 1 0 2 4 2 1 0 3 2 0 1 0 0 0 0 0 2 0 0 18 1 2097.0742 Q9NTJ5 Q9NTJ5 415 432 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 3 0.00024634 125.33 By MS/MS 6 0 1 1 2998200 2998200 0 8299 2576 8570 20558 16531 16531 1 20610 0 LGVQVVITDPEK KIACLDFSLQKTKMKLGVQVVITDPEKLDQ KMKLGVQVVITDPEKLDQIRQRESDITKER K L G E K L 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 1 0 0 3 0 0 12 0 1296.7289 P17987 P17987 248 259 TCP1 T-complex protein 1 subunit alpha yes yes 2 9.1512E-05 159.94 By MS/MS 6 0 1 1 3530700 3530700 0 8300 648 8571 20559 16532 16532 1 24271 0 LGVSCEVIDLR QVHVIREVASMAKEKLGVSCEVIDLRTIIP AKEKLGVSCEVIDLRTIIPWDVDTICKSVI K L G L R T 0 1 0 1 1 0 1 1 0 1 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1259.6544 P21953 P21953 295 305 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes yes 2 2.08E-05 153.97 By MS/MS 7.5 0.5 1 1 2 2115300 2115300 0 8301 684 8572 20560;20561 16533 16533 1 31917 0 LGVSGYLVSR KYSIKYNPGYVLASRLGVSGYLVSRFTGSI VLASRLGVSGYLVSRFTGSIFIGRGSRRNP R L G S R F 0 1 0 0 0 0 0 2 0 0 2 0 0 0 0 2 0 0 1 2 0 0 10 0 1049.5869 Q8IZH2 Q8IZH2 921 930 XRN1 5-3 exoribonuclease 1 yes yes 2 0.0003892 135.43 By MS/MS 2 0 1 1 273970 273970 0 8302 1893 8573 20562 16534 16534 1 92667 0 LGYANAK TVRFKNELERNITIKLGYANAKIYKLDDPS LERNITIKLGYANAKIYKLDDPSCPRPECY K L G A K I 2 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 735.39154 P41091;Q2VIR3 P41091 81 87 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.02338 109.7 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 40124000 40074000 49915 8303 866 8574 20563;20564;20565;20566;20567;20568 16535 16535 1 657250 51149 LGYFSVDPDSHQGK SVALAKPFDKFQFERLGYFSVDPDSHQGKL RLGYFSVDPDSHQGKLVFNRTVTLKEDPGK R L G G K L 0 0 0 2 0 1 0 2 1 0 1 1 0 1 1 2 0 0 1 1 0 0 14 0 1548.7209 P47897 P47897 746 759 QARS Glutamine--tRNA ligase yes yes 2 0.020324 84.31 By MS/MS 4 0 1 1 2124200 2124200 0 8304 928 8575 20569 16536 16536 1 199910 0 LGYPVLVR EAANSLEQAQAAAERLGYPVLVRAAFALGG AQAAAERLGYPVLVRAAFALGGLGSGFASN R L G V R A 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 1 2 0 0 8 0 915.55419 P27708 P27708 548 555 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.026713 92.191 By MS/MS 3 1.41 1 1 1 1 1 5 2439400 2439400 0 8305 745 8576 20570;20571;20572;20573;20574 16537 16537 1 515730 0 LHAEAIKR AQQEALEELQLESPKLHAEAIKRDPNLFPF LQLESPKLHAEAIKRDPNLFPFEKEGPHYT K L H K R D 2 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 936.5505 Q9NQ50 Q9NQ50 157 164 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 3 0.0050776 114.28 By MS/MS 9 0 1 1 735950 735950 0 8306 2536 8577 20575 16538 16538 1 14484 0 LHCTPGDGQR RVYTPSNADIGLRLKLHCTPGDGQRFGHSR GLRLKLHCTPGDGQRFGHSRELESVCVVEA K L H Q R F 0 1 0 1 1 1 0 2 1 0 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1139.5142 Q6L8Q7 Q6L8Q7 248 257 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.0056793 104.06 By MS/MS 5.5 0.5 1 1 2 785470 785470 0 8307 1686 8578 20576;20577 16539 16539 1 7055.4 0 LHDELEEAKDKAR QKELEAASAPEERTRLHDELEEAKDKARRR TRLHDELEEAKDKARRRSIGNIKFIGELFK R L H A R R 2 1 0 2 0 0 3 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 13 2 1552.7845 O43432 O43432 874 886 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 3 0.036666 71.976 By MS/MS 2 0 1 1 379190 379190 0 8308 210 8579 20578 16540 16540 1 128260 0 LHDSLAIER SGTLVMDAYEPEISRLHDSLAIERKIK___ EPEISRLHDSLAIERKIK____________ R L H E R K 1 1 0 1 0 0 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1052.5615 Q15005 Q15005 215 223 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.00086619 135.71 By MS/MS 9 0 1 1 2543200 2543200 0 8309 1469 8580 20579 16541 16541 1 50051 0 LHDSLAIERK SGTLVMDAYEPEISRLHDSLAIERKIK___ PEISRLHDSLAIERKIK_____________ R L H R K I 1 1 0 1 0 0 1 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 10 1 1180.6564 Q15005 Q15005 215 224 SPCS2 Signal peptidase complex subunit 2 yes yes 3 0.046741 66.92 By MS/MS 9 0 1 1 492640 492640 0 8310 1469 8581 20580 16542 16542 0 9695.2 0 LHEDLCEKR QPGNALKRFLTSQTKLHEDLCEKRTAATLA LTSQTKLHEDLCEKRTAATLATHELRAVKG K L H K R T 0 1 0 1 1 0 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1198.5765 Q8N1G4 Q8N1G4 362 370 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 0.034335 103.83 By MS/MS 5 0 1 1 105040 105040 0 8311 1906 8582 20581 16543 16543 0 1053.5 0 LHEEGIIYR MDPKLSAAVTEAFVRLHEEGIIYRSTRLVN TEAFVRLHEEGIIYRSTRLVNWSCTLNSAI R L H Y R S 0 1 0 0 0 0 2 1 1 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1128.5928 P26640 P26640 462 470 VARS Valine--tRNA ligase yes yes 2 0.00066895 141.52 By MS/MS 3.5 0.5 1 1 2 1224700 1224700 0 8312 735 8583 20582;20583 16544;16545 16544 2 55680 0 LHEKKEHSTAEK ALKQHAYSEERRSARLHEKKEHSTAEKAVD SARLHEKKEHSTAEKAVDPKTRLLMYKMVN R L H E K A 1 0 0 0 0 0 3 0 2 0 1 3 0 0 0 1 1 0 0 0 0 0 12 2 1435.7419 O14730 O14730 220 231 RIOK3 Serine/threonine-protein kinase RIO3 yes yes 3 7.1245E-05 158.08 By MS/MS 5 0 1 1 48159 48159 0 8313 134 8584 20584 16546 16546 1 483.01 0 LHELPVPK NLVEQAGSSSLVNGRLHELPVPKPRGTPKP SSLVNGRLHELPVPKPRGTPKPSEGTPAPR R L H P K P 0 0 0 0 0 0 1 0 1 0 2 1 0 0 2 0 0 0 0 1 0 0 8 0 931.5491 Q8N3F8 Q8N3F8 344 351 MICALL1 MICAL-like protein 1 yes yes 3 0.047759 80.229 By MS/MS 5 0 1 1 118740 118740 0 8314 1912 8585 20585 16547 16547 1 1190.9 0 LHFDNCVLKPATEGK HFDLPQQEERERLVRLHFDNCVLKPATEGK LHFDNCVLKPATEGKRRLKLAQFDYGRKCS R L H G K R 1 0 1 1 1 0 1 1 1 0 2 2 0 1 1 0 1 0 0 1 0 0 15 1 1727.8665 Q5T9A4 Q5T9A4 487 501 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 3 0.013516 82.925 By MS/MS 5 0 1 1 7083400 7083400 0 8315 1638 8586 20586 16548 16548 1 71043 0 LHFFMPGFAPLTSR ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG RLHFFMPGFAPLTSRGSQQYRALTVPELTQ R L H S R G 1 1 0 0 0 0 0 1 1 0 2 0 1 3 2 1 1 0 0 0 0 0 14 0 1619.8283 P04350;P68371;Q3ZCM7;A6NNZ2;P07437;Q13885;Q9BVA1;Q9BUF5 P68371 263 276 TUBB4A;TUBB4B;TUBB8;TUBB;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2;3 0.0067479 91.858 By MS/MS 6.4 0.49 3 2 5 1864700 1864700 0 8316 1212;509;1412;2331;472;2324 8587;8588 20587;20588;20589;20590;20591 16549;16550;16551 16551 179 3 15467 0 LHGLDEEAEQK THIDVIHYRKTDAKRLHGLDEEAEQKLFSE DAKRLHGLDEEAEQKLFSEKRVELLKELSR R L H Q K L 1 0 0 1 0 1 3 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1267.6044 P33991 P33991 429 439 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.00025762 138.08 By MS/MS 4 0 1 1 1106500 1106500 0 8317 806 8589 20592 16552 16552 1 104130 0 LHICDHFTR EGRQQICNQQPPCSRLHICDHFTRGNCRFP QPPCSRLHICDHFTRGNCRFPNCLRSHNLM R L H T R G 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1197.5713 Q7Z2W4 Q7Z2W4 171 179 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0019309 122.19 By MS/MS 4 0 1 1 354290 354290 0 8318 1778 8590 20593 16553 16553 1 33341 0 LHIVALIAQK KPGWKETNFQVMQMKLHIVALIAQKGNFSK VMQMKLHIVALIAQKGNFSKTSAQVVLDGL K L H Q K G 2 0 0 0 0 1 0 0 1 2 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1104.7019 Q14008 Q14008 662 671 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0011202 121.29 By MS/MS 2 0 1 1 173560 173560 0 8319 1417 8591 20594 16554 16554 1 58707 0 LHKAQEEHR GLHRAEQSLHDLQERLHKAQEEHRTVEVEK HDLQERLHKAQEEHRTVEVEKVHLEKKLRD R L H H R T 1 1 0 0 0 1 2 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1146.5894 Q13586 Q13586 265 273 STIM1 Stromal interaction molecule 1 yes yes 2 0.032592 106.42 By MS/MS 4.5 0.5 1 1 2 82540 82540 0 8320 1400 8592 20595;20596 16555 16555 1 4785 0 LHLIEEK SRDQLRQLFKDNPFKLHLIEEKVTGPTATV LFKDNPFKLHLIEEKVTGPTATVYGCGTLV K L H E K V 0 0 0 0 0 0 2 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 880.50182 Q9BW92 Q9BW92 216 222 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.032667 102.71 By MS/MS 5 0 1 1 2611800 2611800 0 8321 2346 8593 20597 16556 16556 1 26195 0 LHLQTVPSK YSETLLSYFYKCPVRLHLQTVPSKVVYKYL YKCPVRLHLQTVPSKVVYKYL_________ R L H S K V 0 0 0 0 0 1 0 0 1 0 2 1 0 0 1 1 1 0 0 1 0 0 9 0 1021.592 Q96EL2 Q96EL2 153 161 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 0.00071472 140.11 By MS/MS 10 0 1 1 1350400 1350400 0 8322 2145 8594 20598 16557 16557 1 72784 0 LHNAANANQK KVSEGVEQFEDIWQKLHNAANANQKEKYEA DIWQKLHNAANANQKEKYEADLKKEIKKLQ K L H Q K E 3 0 3 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1079.5472 O75175 O75175 32 41 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 2 0.0042407 107.29 By MS/MS 4 0 1 1 222770 222770 0 8323 303 8595 20599 16558 16558 1 20964 0 LHNSLNEK ILSKLSEETKVALTKLHNSLNEKSIEDFIS TKVALTKLHNSLNEKSIEDFISCLDSAAEA K L H E K S 0 0 2 0 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 953.49304 O94874 O94874 626 633 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.016064 104.06 By MS/MS 4 0.816 1 1 1 3 2788600 2788600 0 8324 372 8596 20600;20601;20602 16559 16559 1 236950 0 LHPEDFPEEDKK YLYAVRDREMFGYMKLHPEDFPEEDKKTYG YMKLHPEDFPEEDKKTYGEIFEKFHPIR__ K L H K K T 0 0 0 2 0 0 3 0 1 0 1 2 0 1 2 0 0 0 0 0 0 0 12 1 1482.6991 O95298 O95298 95 106 NDUFC2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes yes 3 0.00045384 131.43 By MS/MS 10 0 1 1 455380 455380 0 8325 403 8597 20603 16560;16561 16560 2 24543 0 LHPESKDDKHGSYEDAVHSGALND TEAAITILRIDDLIKLHPESKDDKHGSYED HGSYEDAVHSGALND_______________ K L H N D - 2 0 1 4 0 0 2 2 3 0 2 2 0 0 1 3 0 0 1 1 0 0 24 2 2620.179 P17987 P17987 533 556 TCP1 T-complex protein 1 subunit alpha yes yes 3;4 6.514E-05 99.964 By MS/MS 6.2 0.748 1 2 2 5 17375000 17375000 0 8326 648 8598 20604;20605;20606;20607;20608 16562;16563 16563 2 129070 0 LHPFHVIR MVKSCGKDGFHIRVRLHPFHVIRINKMLSC GFHIRVRLHPFHVIRINKMLSCAGADRLQT R L H I R I 0 1 0 0 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 1 0 0 8 0 1017.5872 P27635;Q96L21 P27635 91 98 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 3 0.047236 80.462 By MS/MS 8.5 0.5 1 1 2 830590 830590 0 8327 743 8599 20609;20610 16564 16564 1 13251 0 LHPVILASIVDSYER GPALPGPFPGGRVVRLHPVILASIVDSYER LHPVILASIVDSYERRNEGAARVIGTLLGT R L H E R R 1 1 0 1 0 0 1 0 1 2 2 0 0 0 1 2 0 0 1 2 0 0 15 0 1710.9305 O00303 O00303 94 108 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2;3 0.0011525 116.71 By MS/MS 6.5 0.5 2 2 4 1001700 1001700 0 8328 99 8600 20611;20612;20613;20614 16565;16566;16567;16568 16568 3 9846.9 0 LHQEDNDYINASLIK NRYRDVSPFDHSRIKLHQEDNDYINASLIK LHQEDNDYINASLIKMEEAQRSYILTQGPL K L H I K M 1 0 2 2 0 1 1 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 15 0 1771.8741 P18031 P18031 59 73 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 4.5456E-11 237.07 By MS/MS 6.5 0.5 1 1 2 3828900 3828900 0 8329 649 8601 20615;20616 16569 16569 1 29042 0 LHQSVTK EGQRRNVAVVNSLYKLHQSVTKAIHALMEN AVVNSLYKLHQSVTKAIHALMENAVQPLLT K L H T K A 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 7 0 811.4552 Q9UP83 Q9UP83 587 593 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.021611 111.04 By MS/MS 4 0 1 1 533300 533300 0 8330 2797 8602 20617 16570 16570 1 50187 0 LHSHDIK CGSVLKLLNTHHRVRLHSHDIKYGSGSGQQ LNTHHRVRLHSHDIKYGSGSGQQSVTGVEA R L H I K Y 0 0 0 1 0 0 0 0 2 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 848.45045 Q9HCN8 Q9HCN8 53 59 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.044235 94.006 By MS/MS 9 0 1 1 924100 924100 0 8331 2516 8603 20618 16571 16571 1 18186 0 LHSLLGDYYQAIK LYKMLGYFSLVGLLRLHSLLGDYYQAIKVL LRLHSLLGDYYQAIKVLENIELNKKSMYSR R L H I K V 1 0 0 1 0 1 0 1 1 1 3 1 0 0 0 1 0 0 2 0 0 0 13 0 1519.8035 Q9Y262 Q9Y262 280 292 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 0.00011047 189.17 By MS/MS 5 0 2 2 937680 937680 0 8332 2814 8604 20619;20620 16572;16573 16572 2 9404.5 0 LHSSSHPTSIVK QDLSLPIPGKEDLAKLHSSSHPTSIVKAGS LAKLHSSSHPTSIVKAGSCGEAYAPQGWIA K L H V K A 0 0 0 0 0 0 0 0 2 1 1 1 0 0 1 4 1 0 0 1 0 0 12 0 1291.6884 Q8TEY7 Q8TEY7 518 529 USP33 Ubiquitin carboxyl-terminal hydrolase 33 yes yes 3 0.030253 77.062 By MS/MS 4 0 1 1 836230 836230 0 8333 2006 8605 20621 16574 16574 1 78695 0 LHTAVVSTPPR QRWRCLRLQGLQACRLHTAVVSTPPRWLAE QACRLHTAVVSTPPRWLAERLGLFEELWAA R L H P R W 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 1 2 0 0 2 0 0 11 0 1176.6615 Q9BW92 Q9BW92 20 30 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00079306 125.71 By MS/MS 5 0 1 1 549190 549190 0 8334 2346 8606 20622 16575 16575 1 5508.1 0 LHTGEKPYK GKTFSQTSHLVYHHRLHTGEKPYKCNECGK LVYHHRLHTGEKPYKCNECGKTFARNSVLV R L H Y K C 0 0 0 0 0 0 1 1 1 0 1 2 0 0 1 0 1 0 1 0 0 0 9 1 1071.5713 A2RRD8;Q96IR2 A2RRD8 266 274 ZNF320;ZNF845 Zinc finger protein 320;Zinc finger protein 845 no no 3 0.03043 93.143 By MS/MS 5 0.816 1 1 1 3 937500 937500 0 8335 10 8607 20623;20624;20625 16576 16576 1 26099 0 LHVENEDKK MIMLRISDDKYGRIRLHVENEDKKGVQLQT KYGRIRLHVENEDKKGVQLQTHPNVDKKLF R L H K K G 0 0 1 1 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1110.5669 P48444 P48444 315 323 ARCN1 Coatomer subunit delta yes yes 2;3 0.00032731 162.97 By MS/MS 5.67 0.471 1 2 3 4915700 4915700 0 8336 934 8608 20626;20627;20628 16577;16578 16578 2 33966 0 LHVSEQNAQR NHAEAIVKTLQELQKLHVSEQNAQRANLFH QELQKLHVSEQNAQRANLFHKLVTELRGLS K L H Q R A 1 1 1 0 0 2 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1180.5949 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 332 341 yes yes 2 0.0068331 101.46 By MS/MS 5 0 1 1 513440 513440 0 + 8337 33 8609 20629 16579 16579 1 5149.5 0 LHVSTINLQK DALASGPVETGPMKKLHVSTINLQKAWGAA GPMKKLHVSTINLQKAWGAARRVSKDDWLE K L H Q K A 0 0 1 0 0 1 0 0 1 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1151.6663 P42345 P42345 1258 1267 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.02456 84.615 By MS/MS 2 0 1 1 666040 666040 0 8338 879 8610 20630 16580 16580 1 225280 0 LHYCVSCAIHSK ASVFDAYVLPKLYVKLHYCVSCAIHSKVVR YVKLHYCVSCAIHSKVVRNRSREARKDRTP K L H S K V 1 0 0 0 2 0 0 0 2 1 1 1 0 0 0 2 0 0 1 1 0 0 12 0 1473.6857 P62854;Q5JNZ5 P62854 71 82 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2;3 1.1518E-06 192.64 By MS/MS 9.67 0.471 1 2 3 4287400 4287400 0 8339 1177 8611 20631;20632;20633 16581;16582;16583 16583 3 215150 0 LIAAERERELEECQR RRIHQESELHSYLSRLIAAERERELEECQR LIAAERERELEECQRNHEGDEDDSHVRAQQ R L I Q R N 2 3 0 0 1 1 5 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 15 2 1900.9425 Q9UNE7 Q9UNE7 168 182 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 3 0.0308 73.082 By MS/MS 8 0 1 1 1235600 1235600 0 8340 2786 8612 20634 16584 16584 1 15600 0 LIAAQTGTR RVKCNTDDTIGDLKKLIAAQTGTRWNKIVL IGDLKKLIAAQTGTRWNKIVLKKWYTIFKD K L I T R W 2 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 9 0 929.52943 Q9BZL1 Q9BZL1 30 38 UBL5 Ubiquitin-like protein 5 yes yes 2 0.0016116 126.24 By MS/MS 10 0 1 1 644320 644320 0 8341 2382 8613 20635 16585 16585 1 34727 0 LIADVAPSAIR ______________________________ GLAKLIADVAPSAIRENDIKSYFGRKVAID K L I I R E 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1124.6554 P39748 P39748 9 19 FEN1 Flap endonuclease 1 yes yes 2 0.0063019 100.48 By MS/MS 7 0 1 1 3898900 3898900 0 8342 856 8614 20636 16586 16586 1 61205 0 LIADVAPSAIRENDIK ______________________________ IADVAPSAIRENDIKSYFGRKVAIDASMSI K L I I K S 3 1 1 2 0 0 1 0 0 3 1 1 0 0 1 1 0 0 0 1 0 0 16 1 1723.9468 P39748 P39748 9 24 FEN1 Flap endonuclease 1 yes yes 2 0.036111 94.547 By MS/MS 6.5 0.5 1 1 2 2714600 2714600 0 8343 856 8615 20637;20638 16587 16587 1 34808 0 LIADVGLVGFPNAGK LPLKGQKRIIHLDLKLIADVGLVGFPNAGK LIADVGLVGFPNAGKSSLLSCVSHAKPAIA K L I G K S 2 0 1 1 0 0 0 3 0 1 2 1 0 1 1 0 0 0 0 2 0 0 15 0 1469.8242 A4D1E9 A4D1E9 147 161 GTPBP10 GTP-binding protein 10 yes yes 2 0.00041832 167.11 By MS/MS 7 0 1 1 1370900 1370900 0 8344 15 8616 20639 16588 16588 1 21521 0 LIAEEGVDSLNVK FQLTMRLRSIKADDKLIAEEGVDSLNVKEL DKLIAEEGVDSLNVKELQAACRARGMRALG K L I V K E 1 0 1 1 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 2 0 0 13 0 1385.7402 O95202 O95202 361 373 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 1.6373E-11 234.39 By MS/MS 4.5 0.5 1 1 2 2307700 2307700 0 8345 394 8617 20640;20641 16589;16590 16590 1 52094 0 LIAEGPGETVLVAEEEAAR TALPLYFVGLYCDKKLIAEGPGETVLVAEE GPGETVLVAEEEAARVALRKLYGFTENRRP K L I A R V 4 1 0 0 0 0 5 2 0 1 2 0 0 0 1 0 1 0 0 2 0 0 19 0 1953.0055 Q9H9J2 Q9H9J2 280 298 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2;3 9.4807E-18 296.97 By MS/MS 7.67 0.471 1 2 3 4099500 4099500 0 8346 2487 8618 20642;20643;20644 16591;16592;16593;16594 16593 4 53533 0 LIAELAR ______________________________ ARKKVRPRLIAELARRVRALREQLNRPRDS R L I A R R 2 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 784.48069 P82930 P82930 10 16 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.02911 105.39 By MS/MS 8.5 0.5 1 1 2 8441200 8441200 0 8347 1237 8619 20645;20646 16595 16595 1 107610 0 LIAINANDPEASK LGILALIDEGETDWKLIAINANDPEASKFH WKLIAINANDPEASKFHDIDDVKKFKPGYL K L I S K F 3 0 2 1 0 0 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 13 0 1354.7092 Q9H2U2 Q9H2U2 204 216 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 2 0.00024407 156.58 By MS/MS 8 0 1 1 532790 532790 0 8348 2433 8620 20647 16596 16596 1 6726.4 0 LIAPVAEEEATVPNNK ______________________________ IAPVAEEEATVPNNKITVVGVGQVGMACAI K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 P07195 P07195 8 23 LDHB L-lactate dehydrogenase B chain yes yes 2 5.5777E-11 234.63 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 12926000 12886000 40798 8349 506 8621 20648;20649;20650;20651;20652 16597;16598;16599;16600 16597 4 200830 73477 LIASSLVAGEK TAYGEFLSRLRENPRLIASSLVAGEKLNQE ENPRLIASSLVAGEKLNQENTQSVIYTVFT R L I E K L 2 0 0 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1086.6285 Q14C86 Q14C86 109 119 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.00058547 129.85 By MS/MS 2 0 1 1 1269000 1269000 0 8350 1466 8622 20653 16601 16601 1 429210 0 LIASYCNVGDIEGASK MEEANIQPNRVTYQRLIASYCNVGDIEGAS IASYCNVGDIEGASKILGFMKTKDLPVTEA R L I S K I 2 0 1 1 1 0 1 2 0 2 1 1 0 0 0 2 0 0 1 1 0 0 16 0 1695.8138 P42704 P42704 203 218 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 4.5011E-31 265.77 By MS/MS By MS/MS 4.5 2.4 1 1 4 1 1 1 1 1 1 11 1 43178000 42456000 722540 8351 886 8623 20654;20655;20656;20657;20658;20659;20660;20661;20662;20663;20664;20665 16602;16603;16604;16605;16606;16607;16608;16609;16610;16611 16602 10 1433600 91969 LIAVADSVLTK TDEKILANVTEDAKRLIAVADSVLTKVVGD DAKRLIAVADSVLTKVVGDLLSGTILVGQL R L I T K V 2 0 0 1 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 11 0 1128.6754 Q63HN8 Q63HN8 1081 1091 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0090899 93.111 By MS/MS 1.5 0.5 1 1 2 223880 223880 0 8352 1664 8624 20666;20667 16612 16612 1 69306 0 LIAVEIYR KLFESREKAVRDEAKLIAVEIYRWIRDALR AVRDEAKLIAVEIYRWIRDALRPPLQNINS K L I Y R W 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 8 0 975.57532 Q14008 Q14008 186 193 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.025808 93.195 By MS/MS 2 0 1 1 716260 716260 0 8353 1417 8625 20668 16613 16613 1 242270 0 LICCDILDVLDK KMIREYRQMVETELKLICCDILDVLDKHLI ELKLICCDILDVLDKHLIPAANTGESKVFY K L I D K H 0 0 0 3 2 0 0 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1475.7364 P62258 P62258 95 106 YWHAE 14-3-3 protein epsilon yes yes 2 0.0008786 127.42 By MS/MS 8 0 1 1 367260 367260 0 8354 1146 8626 20669 16614;16615 16614 2 4636.7 0 LICDVSRQELNK VLLQGKNPDITKAWKLICDVSRQELNKIYD AWKLICDVSRQELNKIYDALDVSLIERGES K L I N K I 0 1 1 1 1 1 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 12 1 1473.761 P54136 P54136 310 321 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0036902 129.88 By MS/MS 5 0 1 1 1436700 1436700 0 8355 1043 8627 20670 16616 16616 1 14410 0 LIDDMVAQVLK YKTDFDKNKIWYEHRLIDDMVAQVLKSSGG YEHRLIDDMVAQVLKSSGGFVWACKNYDGD R L I L K S 1 0 0 2 0 1 0 0 0 1 2 1 1 0 0 0 0 0 0 2 0 0 11 0 1243.6846 P48735 P48735 289 299 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 3.6792E-06 179.1 By MS/MS 7 0 1 1 381340 381340 0 8356 942 8628 20671 16617 16617 1 5986.4 0 LIDFGLAR PENIMCVNKTGTRIKLIDFGLARRLENAGS KTGTRIKLIDFGLARRLENAGSLKVLFGTP K L I A R R 1 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 903.5178 Q15746 Q15746 1603 1610 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form yes yes 2 0.0068584 116.88 By MS/MS 7 0 1 1 287770 287770 0 8357 1527 8629 20672 16618 16618 1 4517.5 0 LIDFLECGK DLERGVEICIATPGRLIDFLECGKTNLRRT IATPGRLIDFLECGKTNLRRTTYLVLDEAD R L I G K T 0 0 0 1 1 0 1 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1093.5478 P17844 P17844 228 236 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.0020909 120.15 By MS/MS 5 0 1 1 3816000 3816000 0 8358 646 8630 20673 16619 16619 1 38273 0 LIDFLESGK DLERGVEICIATPGRLIDFLESGKTNLRRC IATPGRLIDFLESGKTNLRRCTYLVLDEAD R L I G K T 0 0 0 1 0 0 1 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 9 0 1020.5492 Q92841 Q92841 305 313 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.0026023 113.66 By MS/MS 5 0 1 1 1652300 1652300 0 8359 2073 8631 20674 16620 16620 1 16572 0 LIDGIVLTK FNRALADHSMAQTPRLIDGIVLTKFDTIDD MAQTPRLIDGIVLTKFDTIDDKVGAAISMT R L I T K F 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 1 0 0 9 0 970.60628 P08240 P08240 581 589 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0094224 101.46 By MS/MS 5 0 1 1 3017600 3017600 0 8360 522 8632 20675 16621 16621 1 30265 0 LIDLCQPTQK MESIKRLYPGSVYGRLIDLCQPTQKKYQIA SVYGRLIDLCQPTQKKYQIAVTKVLGKNMD R L I Q K K 0 0 0 1 1 2 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1214.6329 Q14683 Q14683 519 528 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.0099656 94.409 By MS/MS 3 0 1 1 1748300 1748300 0 8361 1451 8633 20676 16622 16622 1 31990 0 LIDLHSPSEIVK GSKTWDRFQMRIHKRLIDLHSPSEIVKQIT HKRLIDLHSPSEIVKQITSISIEPGVEVEV R L I V K Q 0 0 0 1 0 0 1 0 1 2 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1349.7555 P60866 P60866 88 99 RPS20 40S ribosomal protein S20 yes yes 2;3 1.3324E-08 172.59 By MS/MS By matching 9.5 0.707 1 2 5 7 1 83447000 83340000 106990 8362 1098 8634 20677;20678;20679;20680;20681;20682;20683;20684 16623;16624;16625;16626;16627;16628;16629 16628 7 4424800 136970 LIDNISSR TFERKLPVSSLTISRLIDNISSREEIDHAE SSLTISRLIDNISSREEIDHAEYYLYKFRH R L I S R E 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 8 0 916.49779 Q92552 Q92552 75 82 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0023351 139.97 By MS/MS By matching 7 0 2 1 1 8111900 8008100 103860 8363 2054 8635 20685;20686 16630 16630 1 125710 187060 LIDPQVDESR KMQLNVKNVPLKTIRLIDPQVDESRVLGAL LKTIRLIDPQVDESRVLGALLPFLDAQYQK R L I S R V 0 1 0 2 0 1 1 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1170.5881 Q63HN8 Q63HN8 2025 2034 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.010651 92.866 By MS/MS 1 0 1 1 306820 306820 0 8364 1664 8636 20687 16631 16631 1 73933 0 LIDREIISHDTR PAITLESPDIKYPLRLIDREIISHDTRRFR PLRLIDREIISHDTRRFRFALPSPQHILGL R L I T R R 0 2 0 2 0 0 1 0 1 3 1 0 0 0 0 1 1 0 0 0 0 0 12 1 1466.7841 P00387 P00387 47 58 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 3 0.0027753 105.36 By MS/MS 8 0 1 1 2064000 2064000 0 8365 443 8637 20688 16632 16632 1 26057 0 LIDRENFVDIVDAK AQEALGPPLNIHYLKLIDRENFVDIVDAKL KLIDRENFVDIVDAKLKIPVSGSKSEGLLY K L I A K L 1 1 1 3 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 2 0 0 14 1 1645.8675 Q9GZY4 Q9GZY4 75 88 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 3 0.040809 98.592 By MS/MS 10 0 1 1 146460 146460 0 8366 2399 8638 20689 16633 16633 1 7893.8 0 LIDVLENR RLRMGCEIVIATPGRLIDVLENRYLVLSRC VIATPGRLIDVLENRYLVLSRCTYVVLDEA R L I N R Y 0 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 8 0 970.54475 Q9BUQ8 Q9BUQ8 529 536 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0071584 115.49 By MS/MS 4.5 0.5 1 1 2 2450400 2450400 0 8367 2326 8639 20690;20691 16634 16634 1 198200 0 LIEDFLAR VNKQLDKMGFNIGVRLIEDFLARSNVGRCH GFNIGVRLIEDFLARSNVGRCHDFRETADV R L I A R S 1 1 0 1 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 975.53893 O43617 O43617 55 62 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2 0.0055942 122.74 By MS/MS 9.5 0.5 1 1 2 4397700 4397700 0 8368 222 8640 20692;20693 16635;16636 16635 2 127460 0 LIEDNEYTAR SDTLSCKIADFGLARLIEDNEYTAREGAKF FGLARLIEDNEYTAREGAKFPIKWTAPEAI R L I A R E 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 P06239;P12931;P06241;P07947 P06239 388 397 LCK;SRC;FYN;YES1 Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 2 0.0012537 118.71 By MS/MS 6 0 1 1 1387000 1387000 0 8369 494 8641 20694 16637 16637 1 9534.9 0 LIEELAATR CLGCGSSEATALRPKLIEELAATRIVDVSI TALRPKLIEELAATRIVDVSIGDSHCLALS K L I T R I 2 1 0 0 0 0 2 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1014.571 Q15751 Q15751 658 666 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 0.0016254 126.07 By MS/MS By matching 1.75 0.829 2 1 1 3 1 918890 803240 115660 8370 1529 8642 20695;20696;20697;20698 16638 16638 1 102470 115660 LIEESCPQLANSVQIR PLLQGPDITLSKLYKLIEESCPQLANSVQI IEESCPQLANSVQIRIKLMAEGELKDMEQF K L I I R I 1 1 1 0 1 2 2 0 0 2 2 0 0 0 1 2 0 0 0 1 0 0 16 0 1855.9462 Q9UJX4 Q9UJX4 81 96 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2 2.4155E-11 242.4 By MS/MS 5 0 1 1 3531500 3531500 0 8371 2753 8643 20699 16639 16639 1 35420 0 LIEEVMIGEDK STFDHPELVKLGSCKLIEEVMIGEDKLIHF GSCKLIEEVMIGEDKLIHFSGVALGEACTI K L I D K L 0 0 0 1 0 0 3 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1274.6428 P78371 P78371 348 358 CCT2 T-complex protein 1 subunit beta yes yes 2 1.7124E-05 166.55 By MS/MS 6 0 1 1 2960200 2960200 0 8372 1222 8644 20700 16640 16640 1 20349 0 LIEIENFK ______________________________ ______________________________ K L I F K S 0 0 1 0 0 0 2 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 Q14683 Q14683 6 13 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.018199 101.64 By MS/MS 3.5 1.12 1 1 1 1 4 2144500 2144500 0 8373 1451 8645 20701;20702;20703;20704 16641 16641 1 70529 0 LIEKLDIK VFDAIMNFKKEETAKLIEKLDIKLDSEDKD KKEETAKLIEKLDIKLDSEDKDKEGKPLLK K L I I K L 0 0 0 1 0 0 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 8 1 970.60628 P13639 P13639 315 322 EEF2 Elongation factor 2 yes yes 3 0.029522 95.741 By MS/MS 4 0 1 1 1392100 1392100 0 8374 602 8646 20705 16642 16642 1 131010 0 LIESLFTIQK LKRRNLIIEAVTNLRLIESLFTIQKMIMDQ VTNLRLIESLFTIQKMIMDQEKQEGVSTKC R L I Q K M 0 0 0 0 0 1 1 0 0 2 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1190.6911 Q12789 Q12789 630 639 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 1.9192E-10 207.68 By MS/MS 2 0 1 1 343240 343240 0 8375 1328 8647 20706 16643 16643 1 116100 0 LIEVDDER ______________________________ PATGCQKLIEVDDERKLRTFYEKRMATEVA K L I E R K 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 987.48729 P62753 P62753 15 22 RPS6 40S ribosomal protein S6 yes yes 2 0.0071584 115.49 By MS/MS By MS/MS 6.12 3.3 1 1 1 3 1 1 7 1 54340000 53805000 534690 8376 1169 8648 20707;20708;20709;20710;20711;20712;20713;20714 16644;16645;16646;16647 16647 4 803740 721540 LIEVDDERK ______________________________ ATGCQKLIEVDDERKLRTFYEKRMATEVAA K L I R K L 0 1 0 2 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1115.5823 P62753 P62753 15 23 RPS6 40S ribosomal protein S6 yes yes 2;3 0.0002314 168.27 By MS/MS By MS/MS 8 0 3 2 1 9447300 9390700 56627 8377 1169 8649 20715;20716;20717 16648;16649;16650 16649 2 118560 76416 LIEVDDERKLR ______________________________ GCQKLIEVDDERKLRTFYEKRMATEVAADA K L I L R T 0 2 0 2 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 2 1384.7674 P62753 P62753 15 25 RPS6 40S ribosomal protein S6 yes yes 2 1.9987E-08 198.61 By MS/MS 8 0 1 1 3829100 3829100 0 8378 1169 8650 20718 16651 16651 1 48342 0 LIFDNLKK DDNFASIVTGVEEGRLIFDNLKKSIAYTLT TGVEEGRLIFDNLKKSIAYTLTSNIPEITP R L I K K S 0 0 1 1 0 0 0 0 0 1 2 2 0 1 0 0 0 0 0 0 0 0 8 1 989.59097 P05023;P13637;P50993;Q13733;P20648;P54707 P05023 767 774 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP4A;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Potassium-transporting ATPase alpha chain 2 no no 2;3 0.024491 104.75 By MS/MS 2.5 1.12 2 2 2 2 8 8719500 8719500 0 8379 481;1046 8651 20719;20720;20721;20722;20723;20724;20725;20726 16652;16653;16654;16655 16654 4 1390900 0 LIFLSNR VIEDVQGDDKRYFRRLIFLSNRNVVQSEAR DDKRYFRRLIFLSNRNVVQSEARLLKDVSH R L I N R N 0 1 1 0 0 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 7 0 861.50724 Q8N6R0 Q8N6R0 414 420 METTL13 Methyltransferase-like protein 13 yes yes 2 0.046281 92.467 By MS/MS 5 0 1 1 508480 508480 0 8380 1929 8652 20727 16656 16656 1 5099.8 0 LIFQMPQNK HLFYLLQTNPTYLAKLIFQMPQNKSTKFMD PTYLAKLIFQMPQNKSTKFMDSVIFTLYNY K L I N K S 0 0 1 0 0 2 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 9 0 1117.5954 P46940;Q13576;Q86VI3 P46940 989 997 IQGAP1;IQGAP2;IQGAP3 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP2;Ras GTPase-activating-like protein IQGAP3 no no 2 0.0038407 111.04 By MS/MS 2.5 0.5 2 2 4 421950 421950 0 8381 922;1399;1830 8653;8654 20728;20729;20730;20731 16657;16658;16659;16660 16660 485 4 46098 0 LIFSTITSK DRKIEFPLPDRRQKRLIFSTITSKMNLSEE DRRQKRLIFSTITSKMNLSEEVDLEDYVAR R L I S K M 0 0 0 0 0 0 0 0 0 2 1 1 0 1 0 2 2 0 0 0 0 0 9 0 1008.5855 P43686 P43686 343 351 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.010816 104.06 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 9938900 9887100 51863 8382 900 8655 20732;20733;20734;20735;20736;20737 16661;16662;16663;16664 16664 4 92775 53145 LIGDAAK RITPSYVAFTPEGERLIGDAAKNQLTSNPE AFTPEGERLIGDAAKNQLTSNPENTVFDAK R L I A K N 2 0 0 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 686.39629 P11021;P11142;P54652;P0DMV9;P0DMV8 P11021 75 81 HSPA5;HSPA8;HSPA2;HSPA1B;HSPA1A 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.044235 94.006 By MS/MS 4.5 0.5 1 1 2 60205000 60205000 0 8383 571;572;550 8656 20738;20739 16665 16665 1 942060 0 LIGDAAKNQLTSNPENTVFDAK RITPSYVAFTPEGERLIGDAAKNQLTSNPE NQLTSNPENTVFDAKRLIGRTWNDPSVQQD R L I A K R 3 0 3 2 0 1 1 1 0 1 2 2 0 1 1 1 2 0 0 1 0 0 22 1 2345.1863 P11021 P11021 75 96 HSPA5 78 kDa glucose-regulated protein yes yes 3 2.1127E-06 139.74 By MS/MS 5 0 1 1 1975600 1975600 0 8384 571 8657 20740 16666 16666 1 19814 0 LIGDAAKNQLTSNPENTVFDAKR RITPSYVAFTPEGERLIGDAAKNQLTSNPE QLTSNPENTVFDAKRLIGRTWNDPSVQQDI R L I K R L 3 1 3 2 0 1 1 1 0 1 2 2 0 1 1 1 2 0 0 1 0 0 23 2 2501.2874 P11021 P11021 75 97 HSPA5 78 kDa glucose-regulated protein yes yes 3 1.764E-07 141.79 By MS/MS 5 0 1 1 1283700 1283700 0 8385 571 8658 20741 16667 16667 1 12875 0 LIGDAAKNQVALNPQNTVFDAK NRTTPSYVAFTDTERLIGDAAKNQVALNPQ NQVALNPQNTVFDAKRLIGRKFGDPVVQSD R L I A K R 4 0 3 2 0 2 0 1 0 1 2 2 0 1 1 0 1 0 0 2 0 0 22 1 2326.2281 P0DMV9;P0DMV8 P0DMV9 50 71 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 4.3493E-06 128.29 By MS/MS 5 0 1 1 1691300 1691300 0 8386 550 8659 20742 16668 16668 1 16963 0 LIGDAAKNQVAMNPTNTVFDAK NRTTPSYVAFTDTERLIGDAAKNQVAMNPT NQVAMNPTNTVFDAKRLIGRRFDDAVVQSD R L I A K R 4 0 3 2 0 1 0 1 0 1 1 2 1 1 1 0 2 0 0 2 0 0 22 1 2317.1736 P11142 P11142 50 71 HSPA8 Heat shock cognate 71 kDa protein yes yes 3 4.5582E-06 145.19 By MS/MS 5 0 1 1 3497200 3497200 0 8387 572 8660 20743 16669 16669 258 1 35075 0 LIGEMNSLFDEVR LSPEEIQMFEQENQRLIGEMNSLFDEVRQI QRLIGEMNSLFDEVRQIEGRVVEISRLQEI R L I V R Q 0 1 1 1 0 0 2 1 0 1 2 0 1 1 0 1 0 0 0 1 0 0 13 0 1521.7497 Q9P2W9 Q9P2W9 242 254 STX18 Syntaxin-18 yes yes 2 4.2273E-08 220.29 By MS/MS 7 0 2 2 1012400 1012400 0 8388 2691 8661;8662 20744;20745 16670;16671 16670 1142 2 15893 0 LIGEYGLR PRRPFEKSRLDQELKLIGEYGLRNKREVWR RLDQELKLIGEYGLRNKREVWRVKFTLAKI K L I L R N 0 1 0 0 0 0 1 2 0 1 2 0 0 0 0 0 0 0 1 0 0 0 8 0 919.51272 P46781 P46781 31 38 RPS9 40S ribosomal protein S9 yes yes 2 0.002011 143.11 By MS/MS 8.5 1.12 1 1 1 1 4 89124000 89124000 0 8389 918 8663 20746;20747;20748;20749 16672;16673;16674;16675 16673 4 1749000 0 LIGNLCYK DISNVANGFKSHLIRLIGNLCYKNKDNQDK FKSHLIRLIGNLCYKNKDNQDKVNELDGIP R L I Y K N 0 0 1 0 1 0 0 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 979.51609 Q9UBB4 Q9UBB4 377 384 ATXN10 Ataxin-10 yes yes 2 0.005907 121.29 By MS/MS 7 0 1 1 2309700 2309700 0 8390 2693 8664 20750 16676 16676 1 36259 0 LIGNMALLPIR ______________________________ PDTKLIGNMALLPIRSQFKGPAPRETKDTD K L I I R S 1 1 1 0 0 0 0 1 0 2 3 0 1 0 1 0 0 0 0 0 0 0 11 0 1209.7267 O15145 O15145 15 25 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 2 0.00064786 128.61 By MS/MS 9.33 0.471 2 1 3 579450 579450 0 8391 164 8665;8666 20751;20752;20753 16677;16678 16677 88 2 12797 0 LIGPNCPGVINPGECK MVRVKHKLLRQEKTRLIGPNCPGVINPGEC IGPNCPGVINPGECKIGIMPGHIHKKGRIG R L I C K I 0 0 2 0 2 0 1 3 0 2 1 1 0 0 3 0 0 0 0 1 0 0 16 0 1723.8386 P53597 P53597 167 182 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.00052938 153.49 By MS/MS 8 0 1 1 3787800 3787800 0 8392 1032 8667 20754 16679 16679 1 47820 0 LIGQLNLK LFVGGELIDPADDRKLIGQLNLKDKSLITA DPADDRKLIGQLNLKDKSLITAKLTQISSN K L I L K D 0 0 1 0 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 897.56475 Q93008;O00507 Q93008 949 956 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0010433 143.02 By MS/MS 2.5 0.5 1 1 2 1209800 1209800 0 8393 2085 8668 20755;20756 16680 16680 1 359050 0 LIGVPADAEALSER LPVDMQLKKEKKCVKLIGVPADAEALSERS KLIGVPADAEALSERSGNTPNSPRLAAESK K L I E R S 3 1 0 1 0 0 2 1 0 1 2 0 0 0 1 1 0 0 0 1 0 0 14 0 1439.762 Q96EA4 Q96EA4 535 548 SPDL1 Protein Spindly yes yes 2 0.020522 84.188 By MS/MS 5 0 1 1 3785400 3785400 0 8394 2142 8669 20757 16681 16681 1 37965 0 LIGWGQIR GEKIALSRRVEKHWRLIGWGQIRRGVTIKP RVEKHWRLIGWGQIRRGVTIKPTVDDD___ R L I I R R 0 1 0 0 0 1 0 2 0 2 1 0 0 0 0 0 0 1 0 0 0 0 8 0 941.54469 P41091;Q2VIR3 P41091 453 460 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.0066826 117.7 By MS/MS 7 0.816 1 1 1 3 11335000 11335000 0 8395 866 8670 20758;20759;20760 16682;16683 16682 2 89548 0 LIIAGTSAYAR DYNQLALTARLFRPRLIIAGTSAYARLIDY FRPRLIIAGTSAYARLIDYARMREVCDEVK R L I A R L 3 1 0 0 0 0 0 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 11 0 1134.6397 P34897 P34897 220 230 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 1.6205E-06 182.98 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 6883200 6883200 0 8396 809 8671 20761;20762;20763;20764 16684;16685;16686 16685 3 54163 0 LIITQVRR THIKGFTLNDAANSRLIITQVRRDYLKEAV NDAANSRLIITQVRRDYLKEAVTTLKTVLD R L I R R D 0 2 0 0 0 1 0 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 8 1 997.63965 P42704 P42704 1110 1117 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.035559 98.418 By MS/MS 3 0 1 1 801930 801930 0 8397 886 8672 20765 16687 16687 1 14673 0 LIIVEGCQR YHTEIVFARTSPQQKLIIVEGCQRQGAIVA TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS K L I Q R Q 0 1 0 0 1 1 1 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1086.5856 P05023;P13637;P50993;Q13733;P54707 P05023 699 707 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2 no no 2 6.0775E-07 188.76 By MS/MS By MS/MS 3.17 1.34 1 1 1 2 1 5 1 37592000 37308000 284140 8398 481;1046 8673 20766;20767;20768;20769;20770;20771 16688;16689;16690;16691;16692;16693;16694 16691 7 4785800 605410 LIIWDSYTTNK GTDSRLLVSASQDGKLIIWDSYTTNKVHAI QDGKLIIWDSYTTNKVHAIPLRSSWVMTCA K L I N K V 0 0 1 1 0 0 0 0 0 2 1 1 0 0 0 1 2 1 1 0 0 0 11 0 1352.6976 P62879;P62873 P62879 79 89 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 2 1.562E-06 183.72 By MS/MS 8 0 1 1 1470000 1470000 0 8399 1181 8674 20772 16695 16695 1 18559 0 LIKEGDIVKR LEPDNVGVVVFGNDKLIKEGDIVKRTGAIV FGNDKLIKEGDIVKRTGAIVDVPVGEELLG K L I K R T 0 1 0 1 0 0 1 1 0 2 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1169.7132 P25705 P25705 124 133 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.015734 87.568 By MS/MS By matching 6.33 0.471 2 1 2 1 11086000 10983000 103000 8400 723 8675 20773;20774;20775 16696 16696 1 77136 105540 LIKGEKYEK FAPEDIHIPQIYVHRLIKGEKYEKRIERLS QIYVHRLIKGEKYEKRIERLSIRKEGDGEA R L I E K R 0 0 0 0 0 0 2 1 0 1 1 3 0 0 0 0 0 0 1 0 0 0 9 2 1106.6336 P55809 P55809 269 277 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 3 0.03377 96.665 By MS/MS 6 0 1 1 1397200 1397200 0 8401 1063 8676 20776 16697 16697 1 9604.4 0 LIKVHLDK EIVGKRIRVKLDGSRLIKVHLDKAQQNNVE VKLDGSRLIKVHLDKAQQNNVEHKVETFSG R L I D K A 0 0 0 1 0 0 0 0 1 1 2 2 0 0 0 0 0 0 0 1 0 0 8 1 964.60695 P62081 P62081 153 160 RPS7 40S ribosomal protein S7 yes yes 2;3 0.0034065 123.72 By MS/MS 9 0 2 2 2371400 2371400 0 8402 1138 8677 20777;20778 16698;16699 16698 2 46670 0 LILIESR KHLERNRKDKDAKFRLILIESRIHRLARYY KDKDAKFRLILIESRIHRLARYYKTKRVLP R L I S R I 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 7 0 842.52255 P62277 P62277 115 121 RPS13 40S ribosomal protein S13 yes yes 2 0.047397 91.626 By MS/MS 9 0.816 1 1 1 3 55870000 55870000 0 8403 1151 8678 20779;20780;20781 16700 16700 1 1576800 0 LILQGNQIK EDASEAFAGLTSLTKLILQGNQIKSITKKA LTSLTKLILQGNQIKSITKKAFIGLESLEH K L I I K S 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1025.6233 O94898 O94898 391 399 LRIG2 Leucine-rich repeats and immunoglobulin-like domains protein 2 yes yes 2 0.0087084 102.71 By MS/MS 3 0 1 1 647590 647590 0 8404 374 8679 20782 16701 16701 1 11849 0 LIMGIGHR IIPMEFVNKMKKEGKLIMGIGHRVKSINNP KMKKEGKLIMGIGHRVKSINNPDMRVQILK K L I H R V 0 1 0 0 0 0 0 2 1 2 1 0 1 0 0 0 0 0 0 0 0 0 8 0 895.50619 P53396 P53396 969 976 ACLY ATP-citrate synthase yes yes 2;3 0.018019 96.048 By MS/MS 4 0 2 2 750460 750460 0 8405 1030 8680 20783;20784 16702;16703 16702 567 2 70623 0 LINAVELK GYEEARGDQCDKCGKLINAVELKKPQCKVC QCDKCGKLINAVELKKPQCKVCRSCPVVQS K L I L K K 1 0 1 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 898.54877 P56192 P56192 424 431 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.038995 86.67 By MS/MS 4.5 0.5 1 1 2 7022100 7022100 0 8406 1067 8681 20785;20786 16704 16704 1 635160 0 LINEYKEDPK KIKPLGPMLLNGLTKLINEYKEDPKLLSMA NGLTKLINEYKEDPKLLSMAYSAVGKLSSR K L I P K L 0 0 1 1 0 0 2 0 0 1 1 2 0 0 1 0 0 0 1 0 0 0 10 1 1247.6398 Q5VYK3 Q5VYK3 405 414 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0042525 126.31 By MS/MS 2.5 0.5 1 1 2 522920 522920 0 8407 1656 8682 20787;20788 16705 16705 1 137130 0 LINLVGESLR TDYNNNHEGREEDQRLINLVGESLRLLGNT EEDQRLINLVGESLRLLGNTFVALSDLRCN R L I L R L 0 1 1 0 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1112.6554 P46379 P46379 322 331 BAG6 Large proline-rich protein BAG6 yes yes 2 3.2414E-05 159.79 By MS/MS 3 0 1 1 475890 475890 0 8408 911 8683 20789 16706 16706 1 8707.5 0 LINNCLICGR LPGRHPCDCLGQKHKLINNCLICGRIVCEQ GQKHKLINNCLICGRIVCEQEGSGPCLFCG K L I G R I 0 1 2 0 2 0 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1231.6165 Q15650 Q15650 180 189 TRIP4 Activating signal cointegrator 1 yes yes 2 0.012398 107.29 By MS/MS 5 0 1 1 708150 708150 0 8409 1523 8684 20790 16707 16707 0 7102.3 0 LIPLITSNCTSK CAAIRFIIRHTHVPRLIPLITSNCTSKSVP VPRLIPLITSNCTSKSVPVRRRSFEFLDLL R L I S K S 0 0 1 0 1 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 12 0 1345.7275 O75122 O75122 213 224 CLASP2 CLIP-associating protein 2 yes yes 2 0.0075318 96.171 By MS/MS 3 0 1 1 264070 264070 0 8410 292 8685 20791 16708 16708 1 4831.8 0 LIQCENEVGK RLISIGKWIADNQPRLIQCENEVGKLLFIT DNQPRLIQCENEVGKLLFITEIPELILEDP R L I G K L 0 0 1 0 1 1 2 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1188.5809 Q92540 Q92540 473 482 SMG7 Protein SMG7 yes yes 2 0.0065657 102.06 By MS/MS 3 0 1 1 342890 342890 0 8411 2051 8686 20792 16709 16709 1 6273.9 0 LIQETEVISR TNSRAFTNLVRKALRLIQETEVISRGFTLV RKALRLIQETEVISRGFTLVSAACPFNKAG R L I S R G 0 1 0 0 0 1 2 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1186.6558 Q9HBM0 Q9HBM0 224 233 VEZT Vezatin yes yes 2 0.00030285 133.89 By MS/MS 3.5 0.5 1 1 2 2629400 2629400 0 8412 2507 8687 20793;20794 16710 16710 1 234340 0 LIQEWNSVDLR GRVNPREGIVLHSTKLIQEWNSVDLRTPLS HSTKLIQEWNSVDLRTPLSDTLHLPVWVDN K L I L R T 0 1 1 1 0 1 1 0 0 1 2 0 0 0 0 1 0 1 0 1 0 0 11 0 1371.7147 Q9Y223 Q9Y223 491 501 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.00027578 136.49 By MS/MS 5 0 1 1 876300 876300 0 8413 2808 8688 20795 16711 16711 1 8788.9 0 LIQNVFEIK QVGDIFSNPETVLAKLIQNVFEIKLQSFVK ETVLAKLIQNVFEIKLQSFVKEQLEECRKS K L I I K L 0 0 1 0 0 1 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1102.6386 O00471 O00471 275 283 EXOC5 Exocyst complex component 5 yes yes 2 0.0004659 138.4 By MS/MS 5 0 1 1 2336600 2336600 0 8414 108 8689 20796 16712 16712 1 23435 0 LIQQEDIK ALYEKGLQNGVPGLRLIQQEDIKKKEPYCR NGVPGLRLIQQEDIKKKEPYCRGLMAIDCP R L I I K K 0 0 0 1 0 2 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 985.54441 Q9H9P8 Q9H9P8 166 173 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.0019834 132.76 By MS/MS 7 0 1 1 1729700 1729700 0 8415 2488 8690 20797 16713 16713 1 27154 0 LIQQQLEKELNTLR IACNKQDIAMAKSAKLIQQQLEKELNTLRV KLIQQQLEKELNTLRVTRSAAPSTLDSSST K L I L R V 0 1 1 0 0 3 2 0 0 1 4 1 0 0 0 0 1 0 0 0 0 0 14 1 1724.9785 Q9Y5M8 Q9Y5M8 192 205 SRPRB Signal recognition particle receptor subunit beta yes yes 3 0.00029772 152.4 By MS/MS 8 0 1 1 464750 464750 0 8416 2917 8691 20798 16714 16714 1 5867.5 0 LISELFQK QLLEAIVVATNPSGRLISELFQKLPSKVQY ATNPSGRLISELFQKLPSKVQYPDYYAIIK R L I Q K L 0 0 0 0 0 1 1 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 8 0 976.55933 Q86U86 Q86U86 203 210 PBRM1 Protein polybromo-1 yes yes 2 0.02311 96.19 By MS/MS 2 0 1 1 221950 221950 0 8417 1817 8692 20799 16715 16715 1 75072 0 LISGDAEPTPEQEEK TLRVFRLITSQVFGKLISGDAEPTPEQEEK LISGDAEPTPEQEEKALLSSPEGEEKVYNA K L I E K A 1 0 0 1 0 1 4 1 0 1 1 1 0 0 2 1 1 0 0 0 0 0 15 0 1641.7734 O75592 O75592 3913 3927 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 8.8975E-05 184.34 By MS/MS 2 0.816 1 1 1 3 341500 341500 0 8418 335 8693 20800;20801;20802 16716;16717 16717 2 89743 0 LISQGTIEESMLK RCHRVGQTKEVLVIKLISQGTIEESMLKIN IKLISQGTIEESMLKINQQKLKLEQDMTTV K L I L K I 0 0 0 0 0 1 2 1 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 1447.7592 Q9H4L7 Q9H4L7 977 989 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.0059839 100.09 By MS/MS 3 0 1 1 373780 373780 0 8419 2449 8694 20803 16718 16718 1096 1 6839.1 0 LISSDGHEFIVKR KTYGGCEGPDAMYVKLISSDGHEFIVKREH VKLISSDGHEFIVKREHALTSGTIKAMLSG K L I K R E 0 1 0 1 0 0 1 1 1 2 1 1 0 1 0 2 0 0 0 1 0 0 13 1 1499.8096 Q15369 Q15369 21 33 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 3 0.019855 79.82 By MS/MS 10 0 1 1 554270 554270 0 8420 1502 8695 20804 16719 16719 1 29873 0 LISSVDPQFLK AWAMRAMQHAEVYYKLISSVDPQFLKLTKV VYYKLISSVDPQFLKLTKVDDQIYSEFRKN K L I L K L 0 0 0 1 0 1 0 0 0 1 2 1 0 1 1 2 0 0 0 1 0 0 11 0 1245.6969 Q9BVG4 Q9BVG4 53 63 PBDC1 Protein PBDC1 yes yes 2 0.00042507 144.65 By MS/MS 7.5 0.5 1 1 2 420090 420090 0 8421 2333 8696 20805;20806 16720 16720 0 5946.2 0 LISWYDNEFGYSNR FDAGAGIALNDHFVKLISWYDNEFGYSNRV KLISWYDNEFGYSNRVVDLMAHMASKE___ K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 8.6267E-33 299.29 By MS/MS 7.5 0.5 1 1 2 965980 965980 0 8422 473 8697 20807;20808 16721 16721 1 14851 0 LITASETGEQLISR SLLGLPNPALQALCKLITASETGEQLISRA KLITASETGEQLISRAVKNMVGMLHQVLVQ K L I S R A 1 1 0 0 0 1 2 1 0 2 2 0 0 0 0 2 2 0 0 0 0 0 14 0 1516.8097 Q96AY4 Q96AY4 1838 1851 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.01048 93.766 By MS/MS 2.5 0.5 1 1 2 337540 337540 0 8423 2110 8698 20809;20810 16722 16722 0 90393 0 LITCGTVEEK RVYRIGQKENVVVYRLITCGTVEEKIYRRQ VVVYRLITCGTVEEKIYRRQVFKDSLIRQT R L I E K I 0 0 0 0 1 0 2 1 0 1 1 1 0 0 0 0 2 0 0 1 0 0 10 0 1148.5747 Q2NKX8 Q2NKX8 584 593 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.00088624 125.82 By MS/MS 3 0 1 1 486390 486390 0 8424 1569 8699 20811 16723 16723 1 8899.5 0 LITDEFVK LRPGIHHSLFGDVKKLITDEFVKQKYLDYA LFGDVKKLITDEFVKQKYLDYARVPNSNPP K L I V K Q 0 0 0 1 0 0 1 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 8 0 963.5277 Q9UNF1;Q12816 Q9UNF1 415 422 MAGED2;TRO Melanoma-associated antigen D2;Trophinin yes no 2 0.032104 89.296 By MS/MS 5 0 1 1 2169000 2169000 0 8425 2787 8700 20812 16724 16724 1 21754 0 LITDLQDQNQK KQISSLRDEVEAKAKLITDLQDQNQKMMLE AKAKLITDLQDQNQKMMLEQERLRVEHEKL K L I Q K M 0 0 1 2 0 3 0 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1314.6779 P33176 P33176 729 739 KIF5B Kinesin-1 heavy chain yes yes 2 1.3089E-09 219.72 By MS/MS 4 0.816 1 1 1 3 5607200 5607200 0 8426 800 8701 20813;20814;20815 16725 16725 1 497760 0 LITDNTVEER RAHRIGQKKPVRVFRLITDNTVEERIVERA VRVFRLITDNTVEERIVERAEIKLRLDSIV R L I E R I 0 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 10 0 1188.5986 P28370 P28370 622 631 SMARCA1 Probable global transcription activator SNF2L1 yes yes 2 0.0031145 109.83 By MS/MS 3 0 1 1 414380 414380 0 8427 755 8702 20816 16726 16726 1 7582 0 LITEDVQGK LADLQNDEVAFRKFKLITEDVQGKNCLTNF AFRKFKLITEDVQGKNCLTNFHGMDLTRDK K L I G K N 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5393 P61247 P61247 86 94 RPS3A 40S ribosomal protein S3a yes yes 2 0.034936 96.034 By matching By MS/MS 8 0 2 1 1 74469000 74058000 410920 8428 1118 8703 20817;20818 16727 16727 1 934980 554520 LITPAVVSER KATYDKLCKEVPNYKLITPAVVSERLKIRG VPNYKLITPAVVSERLKIRGSLARAALQEL K L I E R L 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 10 0 1083.6288 P62851 P62851 67 76 RPS25 40S ribosomal protein S25 yes yes 2 0.0089633 96.665 By MS/MS By matching 9.33 0.471 2 1 2 1 104060000 103700000 363030 8429 1176 8704 20819;20820;20821 16728;16729;16730 16730 3 2828200 827820 LITPLAFALTSDNR PGMEVSFYKILQDPRLITPLAFALTSDNRE RLITPLAFALTSDNREQVQSGLRILLEAAP R L I N R E 2 1 1 1 0 0 0 0 0 1 3 0 0 1 1 1 2 0 0 0 0 0 14 0 1530.8406 Q8TCG1 Q8TCG1 509 522 KIAA1524 Protein CIP2A yes yes 2;3 0.0011788 128.36 By MS/MS 4.33 0.471 2 1 3 347690 347690 0 8430 1990 8705 20822;20823;20824 16731;16732;16733 16731 3 29555 0 LITSQVFGK AQQRNCEAETLRVFRLITSQVFGKLISGDA TLRVFRLITSQVFGKLISGDAEPTPEQEEK R L I G K L 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 9 0 991.57023 O75592 O75592 3904 3912 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.03608 81.972 By MS/MS 1 0 1 1 93307 93307 0 8431 335 8706 20825 16734 16734 1 22484 0 LITTQQWLIK PPLLIPTSKYLINNRLITTQQWLIKLTSKQ LINNRLITTQQWLIKLTSKQMMTMHNTKGR R L I I K L 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1242.7336 P00846 P00846 42 51 MT-ATP6 ATP synthase subunit a yes yes 2 9.342E-08 193.1 By MS/MS 9 0 1 1 1594800 1594800 0 8432 448 8707 20826 16735 16735 1 31385 0 LIVAVEQEEIPR EYCQQKGISYKQCGKLIVAVEQEEIPRLQA CGKLIVAVEQEEIPRLQALYEKGLQNGVPG K L I P R L 1 1 0 0 0 1 3 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 12 0 1394.7769 Q9H9P8 Q9H9P8 137 148 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 6.6176E-05 162.38 By MS/MS 7.5 0.5 1 1 2 5540700 5540700 0 8433 2488 8708 20827;20828 16736 16736 1 85412 0 LIVDEAINEDNSVVSLSQPK DLSTAILKQKNRPNRLIVDEAINEDNSVVS AINEDNSVVSLSQPKMDELQLFRGDTVLLK R L I P K M 1 0 2 2 0 1 2 0 0 2 2 1 0 0 1 3 0 0 0 3 0 0 20 0 2169.1165 P55072 P55072 26 45 VCP Transitional endoplasmic reticulum ATPase yes yes 2 6.9083E-27 349.18 By MS/MS 4.5 0.5 1 1 2 4073300 4073300 0 8434 1054 8709 20829;20830 16737 16737 1 368070 0 LIVDHNIADYMTAK MYEKIDLTLLNRLLRLIVDHNIADYMTAKN RLIVDHNIADYMTAKNNVVINYKDMNHTNS R L I A K N 2 0 1 2 0 0 0 0 1 2 1 1 1 0 0 0 1 0 1 1 0 0 14 0 1602.8076 Q6P2Q9 Q6P2Q9 999 1012 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2;3 0.00039506 147.96 By MS/MS 2 0 3 3 2029800 2029800 0 8435 1708 8710;8711 20831;20832;20833 16738;16739;16740 16739 913 3 686570 0 LIVDYSCALQR EDFRKLFSKLPEAERLIVDYSCALQREILL EAERLIVDYSCALQREILLQGRLYLSENWI R L I Q R E 1 1 0 1 1 1 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 0 11 0 1336.6809 Q96CP6;Q3KR37 Q96CP6 106 116 GRAMD1A;GRAMD1B GRAM domain-containing protein 1A;GRAM domain-containing protein 1B yes no 2 0.00019302 157.99 By MS/MS 4 0 1 1 0 0 0 8436 2123 8712 20834 16741 16741 1 0 0 LIVEGHLTK GDCTFIHQFIECQKKLIVEGHLTKAVEETK IECQKKLIVEGHLTKAVEETKLSKENQTRA K L I T K A 0 0 0 0 0 0 1 1 1 1 2 1 0 0 0 0 1 0 0 1 0 0 9 0 1008.5968 Q14BN4 Q14BN4 419 427 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.044063 78.516 By MS/MS 4 0 1 1 935190 935190 0 8437 1465 8713 20835 16742 16742 1 88007 0 LIVGTAGR SQPEKVYTLSVSGDRLIVGTAGRRVLVWDL LSVSGDRLIVGTAGRRVLVWDLRNMGYVQQ R L I G R R 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 785.47594 O43684 O43684 150 157 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0091878 111.65 By MS/MS 7.5 0.5 1 1 2 1846500 1846500 0 8438 228 8714 20836;20837 16743;16744 16743 2 26999 0 LIVIGDSTVGK ______________________________ YQFRLIVIGDSTVGKSCLLHRFTQGRFPGL R L I G K S 0 0 0 1 0 0 0 2 0 2 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1100.6441 Q14964;Q96DA2 Q14964 11 21 RAB39A;RAB39B Ras-related protein Rab-39A;Ras-related protein Rab-39B yes no 2 1.9123E-05 164.68 By MS/MS 8.5 0.5 1 1 2 2963500 2963500 0 8439 1461 8715 20838;20839 16745 16745 1 54452 0 LIVNVNDLR YQSKVRELISDNQYRLIVNVNDLRRKNEKR SDNQYRLIVNVNDLRRKNEKRANRLLNNAF R L I L R R 0 1 2 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1054.6135 P25205 P25205 47 55 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0018505 123.21 By MS/MS 4.5 0.5 1 1 2 3617700 3617700 0 8440 719 8716 20840;20841 16746 16746 1 319500 0 LIYTGNMAR VRFLNTPSDKSEDGRLIYTGNMARAVFGVK KSEDGRLIYTGNMARAVFGVKCFSYSTSLI R L I A R A 1 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 1 0 0 0 9 0 1037.5328 Q9BUB7 Q9BUB7 94 102 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.00016723 156.75 By MS/MS 9.33 0.471 2 1 3 4427300 4427300 0 8441 2323 8717;8718 20842;20843;20844 16747;16748 16747 1072 2 94214 0 LKAADIDQEVKER ATPYIKDLFTCTIKRLKAADIDQEVKERAI KRLKAADIDQEVKERAISCMGQIICNLGDN R L K E R A 2 1 0 2 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 13 2 1513.81 Q86VP6 Q86VP6 576 588 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 3 0.036731 71.933 By MS/MS 3.5 0.5 1 1 2 1291200 1291200 0 8442 1831 8719 20845;20846 16749 16749 1 77529 0 LKAEFQEEAK EAAKTIQDKNKEIERLKAEFQEEAKRRWEY KEIERLKAEFQEEAKRRWEYENELSKVRNN R L K A K R 2 0 0 0 0 1 3 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 10 1 1191.6136 P15924 P15924 1330 1339 DSP Desmoplakin yes yes 3 0.04 91.549 By matching By MS/MS 3.5 0.5 1 1 1 1 261630 163130 98500 8443 628 8720 20847;20848 16750 16750 1 15351 12538 LKAEPAAPPAAPSTPAPPPAVPK KLKRLDEKFGAPDKRLKAEPAAPPAAPSTP PAAPSTPAPPPAVPKELPAPPAPPPASAPT R L K P K E 7 0 0 0 0 0 1 0 0 0 1 2 0 0 9 1 1 0 0 1 0 0 23 1 2174.2099 P48634 P48634 504 526 PRRC2A Protein PRRC2A yes yes 3 3.6613E-07 125.79 By MS/MS 1.5 0.5 1 1 2 1510600 1510600 0 8444 938 8721 20849;20850 16751 16751 1 499500 0 LKDDEVAQLKK CILNARGLTSVINQKLKDDEVAQLKKSADT INQKLKDDEVAQLKKSADTLWDIQKDLKDL K L K K K S 1 0 0 2 0 1 1 0 0 0 2 3 0 0 0 0 0 0 0 1 0 0 11 2 1285.7242 P07195 P07195 309 319 LDHB L-lactate dehydrogenase B chain yes yes 2;3 1.4092E-05 167.11 By MS/MS By matching 8 1.07 3 2 1 1 6 1 9754300 9718100 36280 8445 506 8722 20851;20852;20853;20854;20855;20856;20857 16752;16753;16754 16752 2 148360 65339 LKDEEISAAAIK ELNNKLKDVQEQLSRLKDEEISAAAIKAQF LSRLKDEEISAAAIKAQFEKQLLTERTLKT R L K I K A 3 0 0 1 0 0 2 0 0 2 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1286.7082 O75116 O75116 1006 1017 ROCK2 Rho-associated protein kinase 2 yes yes 2 0.02032 106.16 By MS/MS 3 0 1 1 481540 481540 0 8446 291 8723 20858 16755 16755 1 8810.8 0 LKDELASTK KLEEENRSLKADLQKLKDELASTKQKLEKA KADLQKLKDELASTKQKLEKAENQVLAMRK K L K T K Q 1 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 9 1 1003.555 P51572 P51572 191 199 BCAP31 B-cell receptor-associated protein 31 yes yes 2;3 0.0048945 121.5 By MS/MS 8 0 2 2 1301600 1301600 0 8447 999 8724 20859;20860 16756;16757 16756 2 16433 0 LKDIDEDFKR HPGLKVATNPSFDGRLKDIDEDFKRELRNL SFDGRLKDIDEDFKRELRNLVPLLLAPENL R L K K R E 0 1 0 3 0 0 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 10 2 1277.6616 Q8NHH9 Q8NHH9 313 322 ATL2 Atlastin-2 yes yes 3 1.1006E-05 172.56 By MS/MS 6 0.816 1 1 1 3 8554100 8554100 0 8448 1968 8725 20861;20862;20863 16758 16758 1 64676 0 LKDIVSLVPR EVTNIITSKELLQTKLKDIVSLVPRLRHII LLQTKLKDIVSLVPRLRHIITVDGKPPTWS K L K P R L 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 2 0 0 10 1 1138.7074 O95573 O95573 221 230 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.0063194 94.363 By MS/MS 5 0 1 1 1719500 1719500 0 8449 417 8726 20864 16759 16759 1 17246 0 LKDREDADIQR VAMGSAWPWLLHSVRLKDREDADIQREDPQ HSVRLKDREDADIQREDPQARPLEGSSSED R L K Q R E 1 2 0 3 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 11 2 1357.695 Q12789 Q12789 1819 1829 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.039175 107.34 By MS/MS 2.5 1.12 1 1 1 1 4 1460600 1460600 0 8450 1328 8727 20865;20866;20867;20868 16760 16760 1 262170 0 LKEAELLEPLMPAIR PNEFIRGSTLRFLCKLKEAELLEPLMPAIR LKEAELLEPLMPAIRACLEHRHSYVRRNAV K L K I R A 2 1 0 0 0 0 3 0 0 1 4 1 1 0 2 0 0 0 0 0 0 0 15 1 1721.975 P53618 P53618 127 141 COPB1 Coatomer subunit beta yes yes 3 0.00029522 137.93 By MS/MS 4.5 0.5 2 2 4 2927600 2927600 0 8451 1033 8728;8729 20869;20870;20871;20872 16761;16762 16761 569 2 228150 0 LKEALQPLINR DQKEYQRELERNYHRLKEALQPLINRKIPQ NYHRLKEALQPLINRKIPQLYKAVLPVTCH R L K N R K 1 1 1 0 0 1 1 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 11 1 1293.7769 Q96N67 Q96N67 2101 2111 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 0.00075514 148.56 By MS/MS 2 0 2 2 1403800 1403800 0 8452 2201 8730 20873;20874 16763;16764 16763 2 474820 0 LKECCDKPLLEK LAKYICDNQDTISSKLKECCDKPLLEKSHC SSKLKECCDKPLLEKSHCIAEVEKDAIPEN K L K E K S 0 0 0 1 2 0 2 0 0 0 3 3 0 0 1 0 0 0 0 0 0 0 12 2 1531.7738 CON__P02769 CON__P02769 298 309 yes yes 3 0.006258 96.745 By MS/MS 6 0.816 1 1 1 3 3252800 3252800 0 + 8453 43 8731 20875;20876;20877 16765 16765 1 29238 0 LKEEASKR RDLTLEENQVKKYHRLKEEASKRAATLAQE QVKKYHRLKEEASKRAATLAQELEKFNRDQ R L K K R A 1 1 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 8 2 959.53999 Q14683 Q14683 378 385 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.0023737 167.23 By MS/MS 3.5 0.5 1 1 2 407960 407960 0 8454 1451 8732 20878;20879 16766 16766 1 9694.3 0 LKEEEER PSKATVKAMQEALAKLKEEEERQKREEEER AMQEALAKLKEEEERQKREEEERIKRLEEL K L K E R Q 0 1 0 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 1 931.46108 O60841;Q9H2L5 O60841 351 357 EIF5B;RASSF4 Eukaryotic translation initiation factor 5B;Ras association domain-containing protein 4 yes no 2 0.031366 150.05 By MS/MS 2 0 1 1 308200 308200 0 8455 283 8733 20880 16767 16767 1 104250 0 LKEELEEAR QKEMDEAATAEERGRLKEELEEARDIARRR AEERGRLKEELEEARDIARRRSLGNIKFIG R L K A R D 1 1 0 0 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1115.5823 Q04637 Q04637 880 888 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 2.9173E-06 189.18 By MS/MS By matching 2.43 0.904 1 3 2 1 6 1 25288000 25229000 58590 8456 1291 8734 20881;20882;20883;20884;20885;20886;20887 16768;16769;16770 16769 3 7484300 82857 LKEELEEARDIAR QKEMDEAATAEERGRLKEELEEARDIARRR GRLKEELEEARDIARRRSLGNIKFIGELFK R L K A R R 2 2 0 1 0 0 4 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 13 2 1570.8315 Q04637 Q04637 880 892 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3;4 1.5389E-10 205.12 By MS/MS 2.7 1.27 2 3 2 2 1 10 57388000 57388000 0 8457 1291 8735 20888;20889;20890;20891;20892;20893;20894;20895;20896;20897 16771;16772;16773;16774;16775 16772 5 15320000 0 LKEEYQSLIR KTNAGPRDRELWVQRLKEEYQSLIRYVENN LWVQRLKEEYQSLIRYVENNKNADNDWFRL R L K I R Y 0 1 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 1 0 0 0 10 1 1277.698 Q9Y3C8 Q9Y3C8 32 41 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 2 0.00040801 155.11 By MS/MS 9.5 0.5 1 1 2 1314600 1314600 0 8458 2869 8736 20898;20899 16776 16776 1 28981 0 LKEHEDYCGAR LAVCQHCDLELSILKLKEHEDYCGARTELC SILKLKEHEDYCGARTELCGNCGRNVLVKD K L K A R T 1 1 0 1 1 0 2 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1376.6143 O14545 O14545 102 112 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.00033035 131.12 By MS/MS 5 0 1 1 1268500 1268500 0 8459 125 8737 20900 16777 16777 1 12723 0 LKEHLLR SQRAQSAFKEQRRQKLKEHLLRRKTLFAYK FKEQRRQKLKEHLLRRKTLFAYKQENEMLS K L K L R R 0 1 0 0 0 0 1 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 7 1 907.56034 Q8WWK9 Q8WWK9 30 36 CKAP2 Cytoskeleton-associated protein 2 yes yes 3 0.051312 79.451 By MS/MS 4 0 1 1 309200 309200 0 8460 2035 8738 20901 16778 16778 1 29097 0 LKEIDSKEEK IATQYSLRPRREEVKLKEIDSKEEKYVAKE REEVKLKEIDSKEEKYVAKELAVRTFEVTP K L K E K Y 0 0 0 1 0 0 3 0 0 1 1 3 0 0 0 1 0 0 0 0 0 0 10 2 1217.6503 Q14739 Q14739 177 186 LBR Lamin-B receptor yes yes 3 0.0019834 123.51 By MS/MS 1.5 0.5 1 1 2 315980 315980 0 8461 1456 8739 20902;20903 16779;16780 16779 2 94974 0 LKEIYENMAPGENKR SVPKPLKFLRPHYGKLKEIYENMAPGENKR LKEIYENMAPGENKRFAADIISVLAMTMSG K L K K R F 1 1 2 0 0 0 3 1 0 1 1 2 1 0 1 0 0 0 1 0 0 0 15 2 1790.8985 Q13200 Q13200 106 120 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.027854 83.292 By MS/MS 4 0 1 1 418520 418520 0 8462 1365 8740 20904 16781 16781 791 1 39385 0 LKEKYEK TAADDKQPYEKKAAKLKEKYEKDIAAYRAK PYEKKAAKLKEKYEKDIAAYRAKGKPDAAK K L K E K D 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 0 0 0 1 0 0 0 7 2 936.52803 P09429;B2RPK0;P26583;O15347 P09429 151 157 HMGB1;HMGB1P1;HMGB2;HMGB3 High mobility group protein B1;Putative high mobility group protein B1-like 1;High mobility group protein B2;High mobility group protein B3 yes no 2;3 0.031543 153.73 By MS/MS 8 0 2 2 1456400 1456400 0 8463 535 8741 20905;20906 16782;16783 16782 2 18386 0 LKEQGQAPITPQQGQALAK GTKKDLRAQPDTLRRLKEQGQAPITPQQGQ GQAPITPQQGQALAKQIHAVRYLECSALQQ R L K A K Q 3 0 0 0 0 5 1 2 0 1 2 2 0 0 2 0 1 0 0 0 0 0 19 1 2005.0956 P84095 P84095 129 147 RHOG Rho-related GTP-binding protein RhoG yes yes 3 0.00016622 118.5 By MS/MS 9 0 1 1 885020 885020 0 8464 1246 8742 20907 16784 16784 1 17417 0 LKESQTQDNITVR IFGPLVKLEADYDKKLKESQTQDNITVRWD KKLKESQTQDNITVRWDLGLNKKRIAYFTL K L K V R W 0 1 1 1 0 2 1 0 0 1 1 1 0 0 0 1 2 0 0 1 0 0 13 1 1530.8002 Q92900 Q92900 320 332 UPF1 Regulator of nonsense transcripts 1 yes yes 3 0.017883 107.99 By MS/MS 3.5 0.5 1 1 2 876280 876280 0 8465 2077 8743 20908;20909 16785 16785 1 30392 0 LKETIDNNSVSSPLQSLQQR ILMQNWDAAMEDLTRLKETIDNNSVSSPLQ DNNSVSSPLQSLQQRTWLIHWSLFVFFNHP R L K Q R T 0 1 2 1 0 3 1 0 0 1 3 1 0 0 1 4 1 0 0 1 0 0 20 1 2256.171 P60228 P60228 192 211 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 2.9942E-18 326.09 By MS/MS 6.8 0.748 2 2 1 5 45697000 45697000 0 8466 1090 8744 20910;20911;20912;20913;20914 16786;16787;16788 16787 3 357200 0 LKEVFSMAGVVVR TVFVANLDYKVGWKKLKEVFSMAGVVVRAD KKLKEVFSMAGVVVRADILEDKDGKSRGIG K L K V R A 1 1 0 0 0 0 1 1 0 0 1 1 1 1 0 1 0 0 0 4 0 0 13 1 1433.8065 P52272 P52272 220 232 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 3 0.02699 77.192 By MS/MS 5 0 1 1 439610 439610 0 8467 1012 8745 20915 16789 16789 555 1 4409.1 0 LKEYEAAVEQLK AQMQEQTLQLEQQSKLKEYEAAVEQLKSEQ QSKLKEYEAAVEQLKSEQIRAQAEERRKTL K L K L K S 2 0 0 0 0 1 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 12 1 1419.7609 Q5T9A4 Q5T9A4 93 104 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2;3 1.3451E-05 217.22 By MS/MS 5 0 2 2 9160200 9160200 0 8468 1638 8746 20916;20917 16790;16791 16790 2 91872 0 LKEYEAAVEQLKSEQIR AQMQEQTLQLEQQSKLKEYEAAVEQLKSEQ EYEAAVEQLKSEQIRAQAEERRKTLSEETR K L K I R A 2 1 0 0 0 2 4 0 0 1 2 2 0 0 0 1 0 0 1 1 0 0 17 2 2033.0793 Q5T9A4 Q5T9A4 93 109 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2;3 9.9896E-16 252.12 By MS/MS 5.33 0.471 2 1 3 50211000 50211000 0 8469 1638 8747 20918;20919;20920 16792;16793 16793 2 479160 0 LKGDDLQAIKK FNSKSGQRGSSKSGKLKGDDLQAIKKELTQ KSGKLKGDDLQAIKKELTQIKQKVDSLLEN K L K K K E 1 0 0 2 0 1 0 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 11 2 1227.7187 P07910 P07910 188 198 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 3 0.00090937 126.66 By MS/MS 7.5 0.5 1 1 2 4446500 4446500 0 8470 514 8748 20921;20922 16794 16794 1 69150 0 LKGSGNLEAIHIIK HKDHFTKLAVEAVLRLKGSGNLEAIHIIKK RLKGSGNLEAIHIIKKLGGSLADSYLDEGF R L K I K K 1 0 1 0 0 0 1 2 1 3 2 2 0 0 0 1 0 0 0 0 0 0 14 1 1491.8773 P78371 P78371 190 203 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 0.00026011 137.09 By MS/MS 6.25 0.433 3 1 4 20008000 20008000 0 8471 1222 8749 20923;20924;20925;20926 16795;16796;16797 16795 3 142690 0 LKHECGAAFTSK GKSASVDAEKSMLSKLKHECGAAFTSKLEG LSKLKHECGAAFTSKLEGMFKDMELSKDIM K L K S K L 2 0 0 0 1 0 1 1 1 0 1 2 0 1 0 1 1 0 0 0 0 0 12 1 1347.6605 Q13620;Q13619 Q13620 633 644 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 3 0.016909 120.6 By MS/MS 4 0 1 1 778340 778340 0 8472 1405 8750 20927 16798 16798 1 73247 0 LKISCLEAEKK VMMENFHHIFATLSRLKISCLEAEKKEAKQ TLSRLKISCLEAEKKEAKQKYTDHLQSYVI R L K K K E 1 0 0 0 1 0 2 0 0 1 2 3 0 0 0 1 0 0 0 0 0 0 11 2 1317.7326 Q9NV70 Q9NV70 743 753 EXOC1 Exocyst complex component 1 yes yes 3 0.00068389 125.54 By MS/MS 4 0 1 1 848900 848900 0 8473 2589 8751 20928 16799 16799 1 79887 0 LKKDTYIENEK VLKSAVEAERLVAGKLKKDTYIENEKLISG VAGKLKKDTYIENEKLISGKRQELVTKIDH K L K E K L 0 0 1 1 0 0 2 0 0 1 1 3 0 0 0 0 1 0 1 0 0 0 11 2 1379.7296 P04843 P04843 577 587 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.00054102 128.88 By MS/MS 5 0 1 1 2437300 2437300 0 8474 478 8752 20929 16800 16800 1 24445 0 LKLAQFDYGR FDNCVLKPATEGKRRLKLAQFDYGRKCSEV EGKRRLKLAQFDYGRKCSEVARLTEGMSGR R L K G R K 1 1 0 1 0 1 0 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 10 1 1209.6506 Q9NVI7;Q5T9A4;Q5T2N8 Q5T9A4 504 513 ATAD3A;ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C no no 2;3 0.0058497 128.35 By MS/MS 5.33 0.471 2 1 3 10872000 10872000 0 8475 2598;1638 8753 20930;20931;20932 16801;16802 16802 2 106740 0 LKLEPHEGLLLR TQPGREEGSPLELERLKLEPHEGLLLRFPY LERLKLEPHEGLLLRFPYAA__________ R L K L R F 0 1 0 0 0 0 2 1 1 0 5 1 0 0 1 0 0 0 0 0 0 0 12 1 1416.8453 P08195 P08195 614 625 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 3 0.0006977 123.26 By MS/MS 5 0.816 1 1 1 3 12101000 12101000 0 8476 519 8754 20933;20934;20935 16803 16803 1 206580 0 LKNITLDDASAPR PKAVAAPRPDRLVNRLKNITLDDASAPRLM NRLKNITLDDASAPRLMVLRQPRGPDNSMG R L K P R L 2 1 1 2 0 0 0 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 13 1 1412.7623 O75534 O75534 757 769 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 8.6686E-05 210.44 By MS/MS 4 0 2 2 5904700 5904700 0 8477 333 8755 20936;20937 16804;16805 16804 2 555670 0 LKNQVTQLK EILNGKEISAQIRARLKNQVTQLKEQVPGF AQIRARLKNQVTQLKEQVPGFTPRLAILQV R L K L K E 0 0 1 0 0 2 0 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 9 1 1070.6448 P11586 P11586 20 28 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 3 0.0030871 109.44 By MS/MS 4 0 1 1 613890 613890 0 8478 582 8756 20938 16806 16806 1 57771 0 LKNTLTQTTENLR NLTRENRSLSEEIKRLKNTLTQTTENLRRV KRLKNTLTQTTENLRRVEEDIQQQKATGSE R L K L R R 0 1 2 0 0 1 1 0 0 0 3 1 0 0 0 0 4 0 0 0 0 0 13 1 1530.8366 P15924 P15924 1412 1424 DSP Desmoplakin yes yes 2;3 2.2303E-13 225.55 By matching By MS/MS 3.33 0.471 2 1 1 2 1448500 472140 976400 8479 628 8757 20939;20940;20941 16807;16808 16808 2 44431 124280 LKPFLGSSDCVNQISGK ITCQKTGYSAILEFKLKPFLGSSDCVNQIS PFLGSSDCVNQISGKLKLGKEVLATLEGHW K L K G K L 0 0 1 1 1 1 0 2 0 1 2 2 0 1 1 3 0 0 0 1 0 0 17 1 1848.9404 Q9BZF1 Q9BZF1 608 624 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 3 0.009416 117.07 By MS/MS 4 0 1 1 1644400 1644400 0 8480 2377 8758 20942 16809 16809 1 154750 0 LKPLEVELR GVEAKNYEEIAKVEKLKPLEVELRRLEDLS IAKVEKLKPLEVELRRLEDLSESIVNDFAY K L K L R R 0 1 0 0 0 0 2 0 0 0 3 1 0 0 1 0 0 0 0 1 0 0 9 1 1095.6652 P49755 P49755 144 152 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 3 0.036522 92.538 By MS/MS 9 0 1 1 3519700 3519700 0 8481 961 8759 20943 16810 16810 1 69269 0 LKPNLGNGADLPNYR DTEEDEEEDEKDKGKLKPNLGNGADLPNYR LKPNLGNGADLPNYRWTQTLSELDLAVPFC K L K Y R W 1 1 3 1 0 0 0 2 0 0 3 1 0 0 2 0 0 0 1 0 0 0 15 1 1640.8635 Q9Y266 Q9Y266 159 173 NUDC Nuclear migration protein nudC yes yes 3 0.022531 73.415 By MS/MS 7 0 1 1 704510 704510 0 8482 2816 8760 20944 16811 16811 1 11059 0 LKQDGDSFR DVLGKGWENHVEGQKLKQDGDSFRMKLNTQ HVEGQKLKQDGDSFRMKLNTQEIFDDWARK K L K F R M 0 1 0 2 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 9 1 1064.5251 Q14204 Q14204 682 690 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0059169 131.5 By MS/MS 1.5 0.5 1 1 2 800300 800300 0 8483 1433 8761 20945;20946 16812;16813 16812 2 231640 0 LKQFVSQELVNL AGHNDVELYGQYLERLKQFVSQELVNL___ LERLKQFVSQELVNL_______________ R L K N L - 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 1 0 0 0 2 0 0 12 1 1416.7977 Q5VST6 Q5VST6 277 288 ABHD17B Alpha/beta hydrolase domain-containing protein 17B yes yes 2 0.0054861 123.11 By MS/MS 8 0 1 1 162030 162030 0 8484 1646 8762 20947 16814 16814 1 2045.6 0 LKQIEHTLNEK NHYAMKILDKQKVVKLKQIEHTLNEKRILQ KVVKLKQIEHTLNEKRILQAVNFPFLVKLE K L K E K R 0 0 1 0 0 1 2 0 1 1 2 2 0 0 0 0 1 0 0 0 0 0 11 1 1351.746 P17612;P22694 P17612 83 93 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 3 1.074E-05 166.69 By MS/MS 7 0 1 1 863190 863190 0 8485 644;695 8763 20948 16815;16816 16815 2 13550 0 LKQQSELQSQVR KQSFTMVADTPENLRLKQQSELQSQVRYKE NLRLKQQSELQSQVRYKEEFEKNKGKGFSV R L K V R Y 0 1 0 0 0 4 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 12 1 1442.7841 Q14847 Q14847 74 85 LASP1 LIM and SH3 domain protein 1 yes yes 2 6.9154E-08 225.22 By MS/MS 7 0 1 1 497970 497970 0 8486 1460 8764 20949 16817 16817 1 7817.2 0 LKTEGSDLCDR EHKALTSEIALLQSRLKTEGSDLCDRVSEM LQSRLKTEGSDLCDRVSEMQKLDAQVKELV R L K D R V 0 1 0 2 1 0 1 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 1 1292.6031 P04843 P04843 537 547 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.001389 136.02 By MS/MS By matching 5 0 4 2 2 5918300 5843800 74507 8487 478 8765 20950;20951;20952;20953 16818;16819 16819 2 58611 62570 LKVPEWVDTVK EFVRALAAFLKKSGKLKVPEWVDTVKLAKH KSGKLKVPEWVDTVKLAKHKELAPYDENWF K L K V K L 0 0 0 1 0 0 1 0 0 0 1 2 0 0 1 0 1 1 0 3 0 0 11 1 1312.7391 P39019 P39019 28 38 RPS19 40S ribosomal protein S19 yes yes 2;3 0.019562 118.9 By MS/MS 10 0 2 2 4627400 4627400 0 8488 853 8766 20954;20955 16820;16821 16820 2 249400 0 LKYALTGDEVK KLRECLPLIIFLRNRLKYALTGDEVKKICM LRNRLKYALTGDEVKKICMQRFIKIDGKVR R L K V K K 1 0 0 1 0 0 1 1 0 0 2 2 0 0 0 0 1 0 1 1 0 0 11 1 1235.6762 P62701;Q8TD47;P22090 P62701 52 62 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.0011643 152.64 By MS/MS 8.75 0.829 2 1 1 4 6194800 6194800 0 8489 1165 8767 20956;20957;20958;20959 16822;16823 16823 2 84548 0 LKYALTGDEVKK KLRECLPLIIFLRNRLKYALTGDEVKKICM RNRLKYALTGDEVKKICMQRFIKIDGKVRT R L K K K I 1 0 0 1 0 0 1 1 0 0 2 3 0 0 0 0 1 0 1 1 0 0 12 2 1363.7711 P62701;Q8TD47;P22090 P62701 52 63 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.00030186 169.21 By MS/MS 8.33 0.471 2 1 3 9748000 9748000 0 8490 1165 8768 20960;20961;20962 16824;16825;16826 16824 3 124740 0 LKYENEVALR LLQIDNARLAADDFRLKYENEVALRQSVEA ADDFRLKYENEVALRQSVEADINGLRRVLD R L K L R Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 1233.6717 CON__P13645;P13645 CON__P13645 236 245 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 4.9124E-07 198.61 By MS/MS By MS/MS 5.21 2.98 4 4 4 4 3 4 1 3 3 4 19 15 561290000 326850000 234440000 + 8491 50 8769 20963;20964;20965;20966;20967;20968;20969;20970;20971;20972;20973;20974;20975;20976;20977;20978;20979;20980;20981;20982;20983;20984;20985;20986;20987;20988;20989;20990;20991;20992;20993;20994;20995;20996 16827;16828;16829;16830;16831;16832;16833;16834;16835;16836;16837;16838;16839;16840;16841;16842;16843;16844;16845;16846;16847;16848;16849;16850;16851;16852;16853;16854;16855;16856;16857;16858 16858 32 24669000 64294000 LKYSQSDLEQTK ELRQVQSQAHGLQMRLKYSQSDLEQTKTRH QMRLKYSQSDLEQTKTRHLALNLQEKSKLE R L K T K T 0 0 0 1 0 2 1 0 0 0 2 2 0 0 0 2 1 0 1 0 0 0 12 1 1438.7304 Q14683 Q14683 712 723 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 5.0134E-05 179.94 By MS/MS 3 0 1 1 245790 245790 0 8492 1451 8770 20997 16859 16859 1 4497.3 0 LLAAVQDQCVEIR NKQINWHLVLASNGKLLAAVQDQCVEIRSA GKLLAAVQDQCVEIRSAKDDFTSIIGKCQV K L L I R S 2 1 0 1 1 2 1 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 13 0 1513.7923 A2RRP1 A2RRP1 100 112 NBAS Neuroblastoma-amplified sequence yes yes 2 4.21E-10 196.16 By MS/MS 1.5 0.5 1 1 2 391520 391520 0 8493 11 8771 20998;20999 16860 16860 1 103110 0 LLACIASR AKISSLLEEQFQQGKLLACIASRPGQCGRA EQFQQGKLLACIASRPGQCGRADGYVLEGK K L L S R P 2 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 902.50077 P62241 P62241 171 178 RPS8 40S ribosomal protein S8 yes yes 2 0.0053896 123.69 By MS/MS 8.5 1.12 1 1 1 1 4 29244000 29244000 0 8494 1143 8772 21000;21001;21002;21003 16861;16862 16861 2 405220 0 LLACIASRPGQCGR AKISSLLEEQFQQGKLLACIASRPGQCGRA KLLACIASRPGQCGRADGYVLEGKELEFYL K L L G R A 2 2 0 0 2 1 0 2 0 1 2 0 0 0 1 1 0 0 0 0 0 0 14 1 1557.7868 P62241 P62241 171 184 RPS8 40S ribosomal protein S8 yes yes 2 0.025881 103.31 By MS/MS 8 0 1 1 1303800 1303800 0 8495 1143 8773 21004 16863 16863 1 16461 0 LLADELISPK GKLFLWGQALYIIAKLLADELISPKDIDPV YIIAKLLADELISPKDIDPVQRYVPLKDQR K L L P K D 1 0 0 1 0 0 1 0 0 1 3 1 0 0 1 1 0 0 0 0 0 0 10 0 1097.6332 Q93100 Q93100 453 462 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 0.029381 82.287 By MS/MS 4 0 1 1 957230 957230 0 8496 2089 8774 21005 16864 16864 1 90081 0 LLADPTGAFGK TGEWGRAHKAEGKVRLLADPTGAFGKETDL GKVRLLADPTGAFGKETDLLLDDSLVSIFG R L L G K E 2 0 0 1 0 0 0 2 0 0 2 1 0 1 1 0 1 0 0 0 0 0 11 0 1088.5866 P30044 P30044 149 159 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.021969 84.615 By MS/MS 10 0 1 1 1058900 1058900 0 8497 763 8775 21006 16865 16865 1 57070 0 LLADQAEAR MEHIHKLKADKARKKLLADQAEARRSKTKE DKARKKLLADQAEARRSKTKEARKRREERL K L L A R R 3 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 985.51926 P84098 P84098 154 162 RPL19 60S ribosomal protein L19 yes yes 2 0.0014259 128.6 By MS/MS 8 0.816 1 1 1 3 8543100 8543100 0 8498 1247 8776 21007;21008;21009 16866 16866 1 109710 0 LLADQAEARR MEHIHKLKADKARKKLLADQAEARRSKTKE KARKKLLADQAEARRSKTKEARKRREERLQ K L L R R S 3 2 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 1 1141.6204 P84098 P84098 154 163 RPL19 60S ribosomal protein L19 yes yes 2 0.0037955 98.582 By MS/MS 8 0 1 1 1148700 1148700 0 8499 1247 8777 21010 16867 16867 1 14502 0 LLAEILR KIQEENVIPREKTLRLLAEILREGNQEVPF IPREKTLRLLAEILREGNQEVPFDVPELWY R L L L R E 1 1 0 0 0 0 1 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 7 0 826.52764 P42704 P42704 995 1001 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.015433 121.29 By MS/MS 4.5 1.12 1 1 1 1 4 13717000 13717000 0 8500 886 8778 21011;21012;21013;21014 16868;16869;16870 16869 3 246590 0 LLAEMDSQFDSTTGFLGK SLSIEIGHEVKTQNKLLAEMDSQFDSTTGF EMDSQFDSTTGFLGKTMGKLKILSRGSQTK K L L G K T 1 0 0 2 0 1 1 2 0 0 3 1 1 2 0 2 2 0 0 0 0 0 18 0 1958.9295 O15155 O15155 63 80 BET1 BET1 homolog yes yes 2 0.00031411 162.41 By MS/MS 10 0 1 1 125880 125880 0 8501 165 8779 21015 16871;16872 16871 89 2 6784.3 0 LLAEPVPGIK ______________________________ KETQRLLAEPVPGIKAEPDESNARYFHVVI R L L I K A 1 0 0 0 0 0 1 1 0 1 2 1 0 0 2 0 0 0 0 1 0 0 10 0 1035.6328 P61088;Q5JXB2 P61088 15 24 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 2 0.012046 90.657 By MS/MS 10 0 1 1 1280400 1280400 0 8502 1109 8780 21016 16873 16873 1 69007 0 LLAEPVPGIKAEPDESNAR ______________________________ PVPGIKAEPDESNARYFHVVIAGPQDSPFE R L L A R Y 3 1 1 1 0 0 3 1 0 1 2 1 0 0 3 1 0 0 0 1 0 0 19 1 2005.048 P61088;Q5JXB2 P61088 15 33 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 3 0.0068297 83.37 By MS/MS 10 0 1 1 526070 526070 0 8503 1109 8781 21017 16874 16874 1 28353 0 LLAESVTEVEIFGK WLTLVEKEMRVTLAKLLAESVTEVEIFGKA KLLAESVTEVEIFGKATSIDPNTYITWIDK K L L G K A 1 0 0 0 0 0 3 1 0 1 2 1 0 1 0 1 1 0 0 2 0 0 14 0 1533.829 Q14204 Q14204 1716 1729 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 6.4148E-06 234.39 By MS/MS 1 0 1 1 318770 318770 0 8504 1433 8782 21018 16875 16875 1 76814 0 LLAETVAPAVR IVAQVWPFLGQYMEKLLAETVAPAVRGSNP YMEKLLAETVAPAVRGSNPHLQTFTFTRVE K L L V R G 3 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 1 0 0 2 0 0 11 0 1138.671 Q9BSJ8 Q9BSJ8 160 170 ESYT1 Extended synaptotagmin-1 yes yes 2 1.4029E-05 169.44 By MS/MS 3 1.63 1 1 1 3 5620800 5620800 0 8505 2308 8783 21019;21020;21021 16876;16877;16878 16877 3 102850 0 LLAHEIFEK KYFSAKSGVYCGPLKLLAHEIFEKSNAAGV YCGPLKLLAHEIFEKSNAAGVPCDLVTGEE K L L E K S 1 0 0 0 0 0 2 0 1 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1098.6073 Q8IYB8 Q8IYB8 235 243 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2;3 0.0025078 98.582 By MS/MS 5 0 2 2 2194000 2194000 0 8506 1885 8784 21022;21023 16879;16880 16879 2 22005 0 LLALNSLYSPK FWSHETRLPSNTLDRLLALNSLYSPKIEVH TLDRLLALNSLYSPKIEVHFLSLATNFLLE R L L P K I 1 0 1 0 0 0 0 0 0 0 4 1 0 0 1 2 0 0 1 0 0 0 11 0 1217.702 P78527 P78527 2539 2549 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.017631 86.882 By MS/MS 3 0.816 1 1 1 3 1023900 1023900 0 8507 1225 8785 21024;21025;21026 16881 16881 1 297280 0 LLANMVYQYK ELRNKERISVAAASKLLANMVYQYKGMGLS AAASKLLANMVYQYKGMGLSMGTMICGWDK K L L Y K G 1 0 1 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 2 1 0 0 10 0 1241.6478 P28074 P28074 141 150 PSMB5 Proteasome subunit beta type-5 yes yes 2 3.2882E-15 243.74 By MS/MS 9.33 0.471 2 1 3 2234800 2234800 0 8508 751 8786;8787 21027;21028;21029 16882;16883 16883 377 2 50289 0 LLAPDCEIIQEVGK QDGLLFKVTLGLIRKLLAPDCEIIQEVGKL KLLAPDCEIIQEVGKLYPLEIVFGMNGRIW K L L G K L 1 0 0 1 1 1 2 1 0 2 2 1 0 0 1 0 0 0 0 1 0 0 14 0 1583.8229 Q9NQT5 Q9NQT5 210 223 EXOSC3 Exosome complex component RRP40 yes yes 2 0.0045778 105.17 By MS/MS 8 0 1 1 421040 421040 0 8509 2540 8788 21030 16884 16884 1 5315.6 0 LLAQGLIK CHDQKMVKHREPFHKLLAQGLIKGQTFRLP HREPFHKLLAQGLIKGQTFRLPSGQYLQRE K L L I K G 1 0 0 0 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 854.55894 Q15031 Q15031 593 600 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0078954 113.08 By MS/MS 4.5 0.5 1 1 2 4525900 4525900 0 8510 1477 8789 21031;21032 16885;16886 16885 2 373100 0 LLAQQLVSPVK NVHAHRYRHPGHIHKLLAQQLVSPVKWEQT HIHKLLAQQLVSPVKWEQTMHAIYERKKGR K L L V K W 1 0 0 0 0 2 0 0 0 0 3 1 0 0 1 1 0 0 0 2 0 0 11 0 1194.7336 Q8IVS2 Q8IVS2 315 325 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 2.0516E-05 163.38 By MS/MS 7 0 1 1 966650 966650 0 8511 1863 8790 21033 16887 16887 1 15175 0 LLAQTTLR TLAVANITNADSATRLLAQTTLRNVLGTKN NADSATRLLAQTTLRNVLGTKNLSQILSDR R L L L R N 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 8 0 914.55492 P27105 P27105 145 152 STOM Erythrocyte band 7 integral membrane protein yes yes 2 0.0057139 122.19 By MS/MS By MS/MS 8 0 2 1 1 1721500 1631400 90089 8512 737 8791 21034;21035 16888;16889 16889 2 20597 121570 LLAREEEESESSTSDDKR RTACTSVEEFQVFKKLLAREEEESESSTSD REEEESESSTSDDKRASLDEDEDDDDEEDN K L L K R A 1 2 0 2 0 0 5 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 18 2 2079.9556 Q7Z6M4 Q7Z6M4 319 336 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 3 0.00027849 162.26 By MS/MS 7 0 1 1 1531700 1531700 0 8513 1801 8792 21036 16890 16890 1 24045 0 LLASSPALPSSGAQAR LSDSPLLGPPVGEPRLLASSPALPSSGAQA LASSPALPSSGAQARLTRAPGPPHSAHALP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.00034292 140.91 By MS/MS By matching 3.5 0.5 1 1 1 1 1805700 1553000 252740 8514 2641 8793 21037;21038 16891 16891 1 146140 32170 LLAVTGEQAQQAR LVIIGDRQLSKGTTRLLAVTGEQAQQAREL TRLLAVTGEQAQQARELGQSLAQEVKAATE R L L A R E 3 1 0 0 0 3 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 13 0 1383.747 Q5JTZ9 Q5JTZ9 778 790 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 3.6614E-24 276 By MS/MS By MS/MS 6.17 1.95 2 1 1 1 1 5 1 15075000 14975000 99683 8515 1613 8794 21039;21040;21041;21042;21043;21044 16892;16893;16894;16895;16896 16895 4 1212400 212390 LLCEHFR ANPASPPLSLLVLHRLLCEHFRVLSTVHTH LSLLVLHRLLCEHFRVLSTVHTHSSVKSVP R L L F R V 0 1 0 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 973.48037 Q13155 Q13155 141 147 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.016097 119.57 By MS/MS 8 0.816 1 1 1 3 3656800 3656800 0 8516 1360 8795 21045;21046;21047 16897 16897 1 54107 0 LLCGGGIAADR KILGYINTGKQEGAKLLCGGGIAADRGYFI EGAKLLCGGGIAADRGYFIQPTVFGDVQDG K L L D R G 2 1 0 1 1 0 0 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1101.5601 P05091 P05091 384 394 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.0012543 116.52 By MS/MS 6 0 1 1 2739700 2739700 0 8517 485 8796 21048 16898;16899 16899 2 18834 0 LLCGLLAER SIGKIGGAQNRSYSKLLCGLLAERLRISPD NRSYSKLLCGLLAERLRISPDRVYINYYDM K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.019197 111.74 By MS/MS 10 0 1 1 4423700 4423700 0 8518 611 8797 21049 16900 16900 0 238420 0 LLCSQVLK AEISTLAKMSSVKLRLLCSQVLKELLGQGI MSSVKLRLLCSQVLKELLGQGIDYEKILKL R L L L K E 0 0 0 0 1 1 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 8 0 959.54739 Q9H0A8 Q9H0A8 32 39 COMMD4 COMM domain-containing protein 4 yes yes 2 0.026461 92.47 By MS/MS 9 0 1 1 896160 896160 0 8519 2404 8798 21050 16901 16901 1 17636 0 LLCSTGEYDK EDQDTYNVAIRNYGRLLCSTGEYDKAIQAF RNYGRLLCSTGEYDKAIQAFKSTPLEVLED R L L D K A 0 0 0 1 1 0 1 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 10 0 1184.5383 Q6PGP7 Q6PGP7 1029 1038 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.0013913 116.05 By MS/MS 3 0 1 1 487360 487360 0 8520 1716 8799 21051 16902 16902 1 8917.4 0 LLDAEDVDVPSPDEK LEQAFEVAERLGVTRLLDAEDVDVPSPDEK LLDAEDVDVPSPDEKSVITYVSSIYDAFPK R L L E K S 1 0 0 4 0 0 2 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 15 0 1640.7781 Q9UPN3 Q9UPN3 270 284 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 0.00049325 148.18 By MS/MS 1 0 1 1 71347 71347 0 8521 2798 8800 21052 16903 16903 1 17192 0 LLDAVDTYIPVPAR LEGRDPELGLKSVQKLLDAVDTYIPVPARD KLLDAVDTYIPVPARDLEKPFLLPVEAVYS K L L A R D 2 1 0 2 0 0 0 0 0 1 2 0 0 0 2 0 1 0 1 2 0 0 14 0 1541.8453 P49411 P49411 239 252 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 1.7319E-16 252.14 By MS/MS 6.6 1.2 1 1 1 5 2 10 54530000 54530000 0 8522 949 8801 21053;21054;21055;21056;21057;21058;21059;21060;21061;21062 16904;16905;16906;16907;16908;16909;16910;16911;16912;16913 16905 10 832970 0 LLDCLLESHR DQGMYRFLTSQQLFKLLDCLLESHRFAKAF QQLFKLLDCLLESHRFAKAFNSNNEQRTAL K L L H R F 0 1 0 1 1 0 1 0 1 0 4 0 0 0 0 1 0 0 0 0 0 0 10 0 1254.6391 Q9Y6D6 Q9Y6D6 1682 1691 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2;3 0.0012784 106.88 By MS/MS 2 0 2 2 353870 353870 0 8523 2941 8802 21063;21064 16914;16915 16914 2 119690 0 LLDEAIQAVK ______________________________ DEQEKLLDEAIQAVKVQSFQMKRCLDKNKL K L L V K V 2 0 0 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1098.6285 Q96QK1 Q96QK1 15 24 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00025045 143.7 By MS/MS 5 0 1 1 2644100 2644100 0 8524 2217 8803 21065 16916 16916 1 26519 0 LLDEEEATDNDLR ELLQRNREILDESLRLLDEEEATDNDLRAK LRLLDEEEATDNDLRAKFKERWQRTPSNEL R L L L R A 1 1 1 3 0 0 3 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1531.7002 Q8WUM4 Q8WUM4 457 469 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 5.0273E-17 284.73 By MS/MS 4 0 1 1 1102000 1102000 0 8525 2018 8804 21066 16917 16917 1 103710 0 LLDELTLEGVAR NLFSQTLSLGSQKERLLDELTLEGVARYMQ KERLLDELTLEGVARYMQSERCRRVICLVG R L L A R Y 1 1 0 1 0 0 2 1 0 0 4 0 0 0 0 0 1 0 0 1 0 0 12 0 1327.7347 Q8IXJ6 Q8IXJ6 58 69 SIRT2 NAD-dependent protein deacetylase sirtuin-2 yes yes 2 0.00012986 155.06 By MS/MS 7 0 1 1 119340 119340 0 8526 1877 8805 21067 16918 16918 1 1873.4 0 LLDEVFFSEK NDGVLLAAERRNIHKLLDEVFFSEKIYKLN RNIHKLLDEVFFSEKIYKLNEDMACSVAGI K L L E K I 0 0 0 1 0 0 2 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 10 0 1225.6231 P25789 P25789 55 64 PSMA4 Proteasome subunit alpha type-4 yes yes 2 7.7101E-11 218.55 By MS/MS By MS/MS 7.57 2.06 1 1 3 1 1 5 2 7852200 7683100 169030 8527 727 8806 21068;21069;21070;21071;21072;21073;21074 16919;16920;16921;16922;16923;16924 16922 6 104310 64659 LLDFGSLSNLQVTQPTVGMNFK QEIIEVDPDTKEMLKLLDFGSLSNLQVTQP SNLQVTQPTVGMNFKTPRGPV_________ K L L F K T 0 0 2 1 0 2 0 2 0 0 4 1 1 2 1 2 2 0 0 2 0 0 22 0 2408.241 P08708 P08708 108 129 RPS17 40S ribosomal protein S17 yes yes 3 7.3428E-06 123.54 By MS/MS 9.5 0.5 1 1 2 123380 123380 0 8528 527 8807 21075;21076 16925 16925 230 1 3407.7 0 LLDFLNVK FLNGQVVFEAWGRLRLLDFLNVKNVYFAQY EAWGRLRLLDFLNVKNVYFAQYGEPREGGR R L L V K N 0 0 1 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 8 0 960.56442 Q8NDZ4 Q8NDZ4 82 89 C3orf58 Deleted in autism protein 1 yes yes 2 0.023363 95.909 By MS/MS 7 0 1 1 513130 513130 0 8529 1957 8808 21077 16926 16926 1 8055.3 0 LLDFSYEQYQK TMAAEVLSRRCVLMRLLDFSYEQYQKALRQ VLMRLLDFSYEQYQKALRQSAGAVVIILPR R L L Q K A 0 0 0 1 0 2 1 0 0 0 2 1 0 1 0 1 0 0 2 0 0 0 11 0 1432.6874 Q969V3 Q969V3 89 99 NCLN Nicalin yes yes 2 8.5499E-07 192.64 By MS/MS 5.5 0.5 1 1 2 7672100 7672100 0 8530 2096 8809 21078;21079 16927 16927 1 54390 0 LLDGLEVTAR WTELDTNQHRTHAMRLLDGLEVTAREKRLK THAMRLLDGLEVTAREKRLKVARAILYVAQ R L L A R E 1 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1085.6081 Q5VSL9 Q5VSL9 129 138 STRIP1 Striatin-interacting protein 1 yes yes 2 2.7268E-05 163.16 By MS/MS By matching 4 1.67 1 1 2 1 2 3 3422900 2761300 661540 8531 1645 8810 21080;21081;21082;21083;21084 16928 16928 1 232520 210410 LLDIEGLYSK QADAINAFGESLQKKLLDIEGLYSKVRSRY SLQKKLLDIEGLYSKVRSRYSFIQALVRRI K L L S K V 0 0 0 1 0 0 1 1 0 1 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1149.6281 Q92621 Q92621 1979 1988 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.005997 116.3 By MS/MS 2 0 1 1 226820 226820 0 8532 2065 8811 21085 16929;16930 16929 2 76718 0 LLDISELDMVGAGR IPPSRTLLRKERGVKLLDISELDMVGAGRE KLLDISELDMVGAGREAKRRRKTLDAEVVE K L L G R E 1 1 0 2 0 0 1 2 0 1 3 0 1 0 0 1 0 0 0 1 0 0 14 0 1487.7654 Q9H3P2 Q9H3P2 256 269 NELFA Negative elongation factor A yes yes 2 4.482E-11 233.13 By MS/MS 5 0 1 1 313560 313560 0 8533 2439 8812 21086 16931 16931 1093 1 3144.8 0 LLDIVAR QGSTSKHEFQAETKKLLDIVARSLYSEKEV EFQAETKKLLDIVARSLYSEKEVFIRELIS K L L A R S 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 798.49634 Q12931 Q12931 97 103 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.017961 114.72 By MS/MS 5 0 1 1 2759200 2759200 0 8534 1340 8813 21087 16932 16932 1 27674 0 LLDKVELMLPEK MSAAGARGLRATYHRLLDKVELMLPEKLRP YHRLLDKVELMLPEKLRPLYNHPAGPRTVF R L L E K L 0 0 0 1 0 0 2 0 0 0 4 2 1 0 1 0 0 0 0 1 0 0 12 1 1426.8105 O95563 O95563 16 27 MPC2 Mitochondrial pyruvate carrier 2 yes yes 3 0.035864 72.089 By MS/MS 10 0 1 1 215730 215730 0 8535 416 8814 21088 16933 16933 159 1 11627 0 LLDLELTSR VDGEKYQKGTRVRLRLLDLELTSRFLGATT TRVRLRLLDLELTSRFLGATTDTTVLEANA R L L S R F 0 1 0 1 0 0 1 0 0 0 4 0 0 0 0 1 1 0 0 0 0 0 9 0 1058.5972 Q9Y2Q9 Q9Y2Q9 144 152 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.00011735 158.87 By MS/MS 9.33 0.471 2 1 3 12441000 12441000 0 8536 2838 8815 21089;21090;21091 16934;16935;16936 16934 3 281240 0 LLDLVQQSCNYK NPKAYPLADAHLTKKLLDLVQQSCNYKQLR TKKLLDLVQQSCNYKQLRKGANEATKTLNR K L L Y K Q 0 0 1 1 1 2 0 0 0 0 3 1 0 0 0 1 0 0 1 1 0 0 12 0 1479.7392 P55769 P55769 22 33 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 7.8373E-06 180.66 By MS/MS 10 0 1 1 569890 569890 0 8537 1061 8816 21092 16937 16937 1 30715 0 LLDMDGIIVEK TLSIPITPERTDIARLLDMDGIIVEKQRRL DIARLLDMDGIIVEKQRRLATLLGLQAPPT R L L E K Q 0 0 0 2 0 0 1 1 0 2 2 1 1 0 0 0 0 0 0 1 0 0 11 0 1244.6686 Q14152 Q14152 341 351 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.0342E-05 172.88 By MS/MS By MS/MS 3.58 1.31 1 2 8 3 3 2 17 2 46547000 45977000 569290 8538 1422 8817;8818 21093;21094;21095;21096;21097;21098;21099;21100;21101;21102;21103;21104;21105;21106;21107;21108;21109;21110;21111 16938;16939;16940;16941;16942;16943;16944;16945;16946;16947;16948;16949;16950;16951;16952;16953 16952 819 16 1441300 72463 LLDMDGIIVEKQR TLSIPITPERTDIARLLDMDGIIVEKQRRL ARLLDMDGIIVEKQRRLATLLGLQAPPTRI R L L Q R R 0 1 0 2 0 1 1 1 0 2 2 1 1 0 0 0 0 0 0 1 0 0 13 1 1528.8283 Q14152 Q14152 341 353 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0414 65.234 By MS/MS 3 0 1 1 0 0 0 8539 1422 8819 21112 16954 16954 819 1 0 0 LLDMGETDLMLAALR AEKIFRSNGVQLLQRLLDMGETDLMLAALR LLDMGETDLMLAALRTLVGICSEHQSRTVA R L L L R T 2 1 0 2 0 0 1 1 0 0 5 0 2 0 0 0 1 0 0 0 0 0 15 0 1660.8528 Q9H3U1 Q9H3U1 203 217 UNC45A Protein unc-45 homolog A yes yes 2 9.7796E-15 208.17 By MS/MS 4 0 2 2 445250 445250 0 8540 2442 8820;8821 21113;21114 16955;16956 16956 1094;1095 1 41901 0 LLDNEDGENPQR AQAQRLMQLICYPHRLLDNEDGENPQRQRI PHRLLDNEDGENPQRQRIKRILQNLDQWTM R L L Q R Q 0 1 2 2 0 1 2 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 12 0 1398.6375 Q93074 Q93074 1330 1341 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 2 0.00056684 133.23 By MS/MS 2 0 1 1 357170 357170 0 8541 2088 8822 21115 16957 16957 1 120810 0 LLDSITVPVAR MQPAQHGEIIKHMAKLLDSITVPVARASIL HMAKLLDSITVPVARASILWLIGENCERVP K L L A R A 1 1 0 1 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 2 0 0 11 0 1182.6972 O00203 O00203 486 496 AP3B1 AP-3 complex subunit beta-1 yes yes 2 6.054E-07 195.79 By MS/MS 4 0.816 1 1 1 3 1765800 1765800 0 8542 90 8823 21116;21117;21118 16958 16958 1 135900 0 LLDSWFTSTQEK LAVQVHAWQLYYSKKLLDSWFTSTQEKKHK SKKLLDSWFTSTQEKKHK____________ K L L E K K 0 0 0 1 0 1 1 0 0 0 2 1 0 1 0 2 2 1 0 0 0 0 12 0 1453.7089 Q8N5M9 Q8N5M9 169 180 JAGN1 Protein jagunal homolog 1 yes yes 2 9.5432E-25 271.62 By MS/MS 9 0 1 1 261760 261760 0 8543 1924 8824 21119 16959 16959 1 5151.4 0 LLDTNPEINQSDSQDSR LFYVTAFDRDRAMQRLLDTNPEINQSDSQD DTNPEINQSDSQDSRVAPRLDRKKRTVNRE R L L S R V 0 1 2 3 0 2 1 0 0 1 2 0 0 0 1 3 1 0 0 0 0 0 17 0 1930.8868 Q14669 Q14669 1565 1581 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 5.581E-07 211.82 By MS/MS 2 0 1 1 466130 466130 0 8544 1447 8825 21120 16960 16960 1 157660 0 LLDVDNR SYMLPPLFLEPGDLRLLDVDNRVVLPIEAP FLEPGDLRLLDVDNRVVLPIEAPIRMMITS R L L N R V 0 1 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 843.44503 P00403 P00403 135 141 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 0.006926 147.69 By MS/MS 9.5 0.5 1 1 2 3872000 3872000 0 8545 444 8826 21121;21122 16961 16961 1 81297 0 LLDVDNRVVLPIEAPIR SYMLPPLFLEPGDLRLLDVDNRVVLPIEAP DVDNRVVLPIEAPIRMMITSQDVLHSWAVP R L L I R M 1 2 1 2 0 0 1 0 0 2 3 0 0 0 2 0 0 0 0 3 0 0 17 1 1931.1204 P00403 P00403 135 151 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 3 0.0002115 143.93 By MS/MS 9 0 1 1 148800 148800 0 8546 444 8827 21123 16962;16963 16963 2 2928.5 0 LLDVTGGLGTDELR LPLAVASTADLIRCKLLDVTGGLGTDELRL KLLDVTGGLGTDELRLLYGMALVRFVNLIS K L L L R L 0 1 0 2 0 0 1 3 0 0 4 0 0 0 0 0 2 0 0 1 0 0 14 0 1457.7726 Q9Y4W2 Q9Y4W2 99 112 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2 0.00039862 163.45 By MS/MS 4 0 1 1 313360 313360 0 8547 2901 8828 21124 16964 16964 1 29489 0 LLDVVHPAAK RGKATISNDGATILKLLDVVHPAAKTLVDI ATILKLLDVVHPAAKTLVDIAKSQDAEVGD K L L A K T 2 0 0 1 0 0 0 0 1 0 2 1 0 0 1 0 0 0 0 2 0 0 10 0 1061.6233 Q99832 Q99832 68 77 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.0069251 101.25 By MS/MS By matching 7.22 1.4 4 2 1 1 1 7 2 86008000 85854000 153230 8548 2270 8829 21125;21126;21127;21128;21129;21130;21131;21132;21133 16965;16966;16967 16965 3 622820 157010 LLDYVATVEDEAAAAK LDIPMISWVVMLVSRLLDYVATVEDEAAAA LDYVATVEDEAAAAKKPLNGNQWSFINNNL R L L A K K 5 0 0 2 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 2 0 0 16 0 1677.8461 Q9NR09 Q9NR09 2178 2193 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 6.7347E-05 231.66 By MS/MS 1.5 0.5 1 1 2 253160 253160 0 8549 2543 8830 21134;21135 16968;16969 16968 1 68736 0 LLDYVPIGPR YKSQLSCVVVDDIERLLDYVPIGPRFSNLV DDIERLLDYVPIGPRFSNLVLQALLVLLKK R L L P R F 0 1 0 1 0 0 0 1 0 1 2 0 0 0 2 0 0 0 1 1 0 0 10 0 1141.6495 P46459 P46459 608 617 NSF Vesicle-fusing ATPase yes yes 2 0.0048614 116.37 By MS/MS 7 2 1 1 2 219990 219990 0 8550 912 8831 21136;21137 16970;16971 16970 2 4329.4 0 LLEAASVSSK DAINRSMVEDITGLRLLEAASVSSKGLPSP ITGLRLLEAASVSSKGLPSPYNMSSAPGSR R L L S K G 2 0 0 0 0 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 10 0 1003.555 P15924 P15924 2802 2811 DSP Desmoplakin yes yes 2 0.0071177 109.44 By MS/MS By matching 2 0.707 1 2 1 3 1 1229800 1197600 32238 8551 628 8832 21138;21139;21140;21141 16972;16973;16974 16974 3 331540 45590 LLEAFHNQGPVIK KKHQRTLMPEKLSHKLLEAFHNQGPVIKRK HKLLEAFHNQGPVIKRKHDLHKMAEANRAL K L L I K R 1 0 1 0 0 1 1 1 1 1 2 1 0 1 1 0 0 0 0 1 0 0 13 0 1464.8089 Q9Y2R9 Q9Y2R9 209 221 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 5.3368E-05 178.54 By MS/MS 8 0 1 1 4424100 4424100 0 8552 2841 8833 21142 16975 16975 1 55854 0 LLEAFTER LEAFRLPGEAPVIQRLLEAFTERWMNCNGS EAPVIQRLLEAFTERWMNCNGSPFANSDAC R L L E R W 1 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 977.5182 Q92538 Q92538 801 808 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0073734 114.5 By MS/MS 3.5 0.5 1 1 2 1846100 1846100 0 8553 2050 8834 21143;21144 16976 16976 1 149810 0 LLEAQIATGGIIDPK QAMNKELIEKGHGIRLLEAQIATGGIIDPK LLEAQIATGGIIDPKESHRLPVDIAYKRGY R L L P K E 2 0 0 1 0 1 1 2 0 3 2 1 0 0 1 0 1 0 0 0 0 0 15 0 1537.8716 P15924 P15924 2367 2381 DSP Desmoplakin yes yes 2 1.9452E-15 219.97 By MS/MS By MS/MS 2.86 1.96 2 2 1 1 1 3 4 3006500 834460 2172100 8554 628 8835 21145;21146;21147;21148;21149;21150;21151 16977;16978;16979;16980;16981;16982;16983;16984;16985 16980 9 158140 662160 LLEATAKPEPEEK TGATDARPRRRKPARLLEATAKPEPEEKSR ARLLEATAKPEPEEKSRAKRQKDFDIAEQN R L L E K S 2 0 0 0 0 0 4 0 0 0 2 2 0 0 2 0 1 0 0 0 0 0 13 1 1453.7664 Q96KC8 Q96KC8 450 462 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 2 1.746E-06 176.48 By MS/MS 6 0 1 1 0 0 0 8555 2186 8836 21152 16986 16986 1 0 0 LLEDKNGEVQNLAVK LDDDSERKVVKMILKLLEDKNGEVQNLAVK LLEDKNGEVQNLAVKCLGPLVSKVKEYQVE K L L V K C 1 0 2 1 0 1 2 1 0 0 3 2 0 0 0 0 0 0 0 2 0 0 15 1 1668.9046 Q86VP6;O75155 Q86VP6 56 70 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 no no 3 0.00078668 118.73 By MS/MS 3 0 1 1 1307100 1307100 0 8556 1831;301 8837 21153 16987 16987 1 23917 0 LLEEALLR SAGCLASLQQPVGIRLLEEALLRLLPAELP QQPVGIRLLEEALLRLLPAELPAKRVRGKA R L L L R L 1 1 0 0 0 0 2 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 955.57023 P78527 P78527 2892 2899 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0011651 151.29 By MS/MS 3 1.41 1 1 1 1 1 5 15214000 15214000 0 8557 1225 8838 21154;21155;21156;21157;21158 16988;16989;16990;16991;16992 16990 5 3158100 0 LLEEAQLQDLEK KKIFNSDELIHFRLRLLEEAQLQDLEKALV RLRLLEEAQLQDLEKALVLANPEVSLWRKQ R L L E K A 1 0 0 1 0 2 3 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 12 0 1427.7508 Q9NU22 Q9NU22 222 233 MDN1 Midasin yes yes 2 6.3868E-13 242.45 By MS/MS 1.5 0.5 1 1 2 1129000 1129000 0 8558 2580 8839 21159;21160 16993;16994 16993 2 324470 0 LLEEGVLR IQEAQVELQKASEERLLEEGVLRQIPVVGS QKASEERLLEEGVLRQIPVVGSVLNWFSPV R L L L R Q 0 1 0 0 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 927.53893 Q6P996 Q6P996 632 639 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 0.028396 98.523 By MS/MS By matching 3.25 0.829 1 1 2 1 3 1970700 1678600 292190 8559 1715 8840 21161;21162;21163;21164 16995 16995 1 157960 358530 LLEEKDPVPLFK EWVGLTLEEAIEKQRLLEEKDPVPLFKIYV KQRLLEEKDPVPLFKIYVAELIQQLQQQAL R L L F K I 0 0 0 1 0 0 2 0 0 0 3 2 0 1 2 0 0 0 0 1 0 0 12 1 1426.8072 Q13084 Q13084 217 228 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2;3 0.001438 144.55 By MS/MS 8 0 2 2 9801200 9801200 0 8560 1350 8841 21165;21166 16996;16997 16997 2 123740 0 LLEELEEGQK AATTGSGVKVPRNFRLLEELEEGQKGVGDG PRNFRLLEELEEGQKGVGDGTVSWGLEDDE R L L Q K G 0 0 0 0 0 1 4 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1186.6081 Q13404;Q15819 Q13404 17 26 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 2 1.3376E-05 172.25 By MS/MS 10 0 1 1 476180 476180 0 8561 1377;1536 8842 21167 16998 16998 1 25664 0 LLEENVSAFK EANVLATAPDKKKQKLLEENVSAFKTEYDA KKKQKLLEENVSAFKTEYDAVAEKAGKVEA K L L F K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1148.6077 Q9NTJ3 Q9NTJ3 858 867 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0047276 106.2 By MS/MS 3 0 1 1 976310 976310 0 8562 2575 8843 21168 16999 16999 1 17864 0 LLEGEDAHLSSQQASGQSYSSR DVKTRLEQEIATYRRLLEGEDAHLSSQQAS HLSSQQASGQSYSSREVFTSSSSSSSRQTR R L L S R E 2 1 0 1 0 3 2 2 1 0 3 0 0 0 0 6 0 0 1 0 0 0 22 0 2349.0833 CON__P08779;P08779 CON__P08779 420 441 KRT16 Keratin, type I cytoskeletal 16 yes no 3 3.7271E-08 156.29 By matching By MS/MS 4.5 3.3 1 1 2 1 1 1 5 1626500 250150 1376300 + 8563 47 8844 21169;21170;21171;21172;21173;21174 17000;17001;17002;17003;17004 17004 5 4577.1 931510 LLEGEDAHLSSSQFSSGSQSSR DVKTRLEQEIATYRRLLEGEDAHLSSSQFS HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R L L S R D 1 1 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 22 0 2308.0567 CON__P02533;P02533;CON__Q61782 CON__P02533 418 439 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 2.922E-31 233.84 By MS/MS By MS/MS 3.33 1.49 1 2 2 2 1 1 6 3 41514000 21317000 20197000 + 8564 39 8845 21175;21176;21177;21178;21179;21180;21181;21182;21183 17005;17006;17007;17008;17009;17010;17011 17006 7 1791500 2963800 LLEGEECR NVKLALDVEIATYRKLLEGEECRMSGDLSS EIATYRKLLEGEECRMSGDLSSNVTVSVTS K L L C R M 0 1 0 0 1 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1004.4597 CON__P13647;P13647;P12036;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__P02538;P02538;CON__O95678;O95678;CON__P07744;CON__P04259;CON__P48668;P48668;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q3TTY5;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__P35908v2 483 490 KRT5;NEFH;KRT2;KRT6A;KRT75;KRT6C;KRT74;KRT73;KRT78 Keratin, type II cytoskeletal 5;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 no no 2 0.00067055 171.38 By MS/MS By MS/MS 5.19 2.92 2 2 1 2 2 2 1 1 1 2 8 8 27509000 18060000 9449000 + 8565 55;52;44;56;40;74;65;70;62 8846 21184;21185;21186;21187;21188;21189;21190;21191;21192;21193;21194;21195;21196;21197;21198;21199 17012;17013;17014;17015;17016;17017;17018;17019;17020;17021;17022;17023;17024;17025;17026;17027 17015 16 1321500 11666000 LLEGEEQR NSKLGLDIEIATYRRLLEGEEQRLCEGVGS EIATYRRLLEGEEQRLCEGVGSVNVCVSSS R L L Q R L 0 1 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 972.48762 CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__Q61726 CON__O43790 409 416 KRT86;KRT81;KRT83 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3 yes no 2 0.032615 104.06 By MS/MS 10 0 1 1 391910 0 391910 + 8566 35 8847 21200 17028 17028 1 0 501750 LLEGIGLENLDSPAATK VAQALKADLVPYLLKLLEGIGLENLDSPAA EGIGLENLDSPAATKAQIVKALKAMTRSLQ K L L T K A 2 0 1 1 0 0 2 2 0 1 4 1 0 0 1 1 1 0 0 0 0 0 17 0 1739.9305 O75165 O75165 2140 2156 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.8543E-53 321.78 By MS/MS 2 0 1 1 0 0 0 8567 302 8848 21201 17029 17029 1 0 0 LLEGTIVNVPEK LRDVGGEGVQQGLLKLLEGTIVNVPEKNSR LLKLLEGTIVNVPEKNSRKLRGETVQVDTT K L L E K N 0 0 1 0 0 0 2 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 12 0 1310.7446 O76031 O76031 387 398 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 4.1574E-06 217.02 By MS/MS 5 0 1 1 2454200 2454200 0 8568 360 8849 21202 17030 17030 1 24614 0 LLEHLPQEVPYNVQQK SQTPEEICANIIREKLLEHLPQEVPYNVQQ LEHLPQEVPYNVQQKTAVWEEGPGGELVIQ K L L Q K T 0 0 1 0 0 3 2 0 1 0 3 1 0 0 2 0 0 0 1 2 0 0 16 0 1934.0262 O75616 O75616 356 371 ERAL1 GTPase Era, mitochondrial yes yes 3 0.019041 81.185 By MS/MS 7 0 1 1 1833500 1833500 0 8569 339 8850 21203 17031 17031 1 28782 0 LLEIVSYK KKAVELGEKASGKLRLLEIVSYKIIGVHQE KASGKLRLLEIVSYKIIGVHQEDELLECLS R L L Y K I 0 0 0 0 0 0 1 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 8 0 963.56408 Q93009 Q93009 941 948 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.0064572 118.74 By MS/MS 4 0.816 1 1 1 3 723080 723080 0 8570 2086 8851 21204;21205;21206 17032 17032 1 26952 0 LLELADIDPTLRPR RMLFPEAQRLESTGRLLELADIDPTLRPRQ RLLELADIDPTLRPRQLSISHFKSLCDVYR R L L P R Q 1 2 0 2 0 0 1 0 0 1 4 0 0 0 2 0 1 0 0 0 0 0 14 1 1620.9199 Q8WVM0 Q8WVM0 280 293 TFB1M Dimethyladenosine transferase 1, mitochondrial yes yes 3 0.021907 75.479 By MS/MS 7.5 0.5 1 1 2 812880 812880 0 8571 2027 8852 21207;21208 17033 17033 1 12347 0 LLELEQDASSAK LNMDLDRASLDLMIRLLELEQDASSAKLLN MIRLLELEQDASSAKLLNEKDMNKIKEKIR R L L A K L 2 0 0 1 0 1 2 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 12 0 1302.6667 Q7Z5K2 Q7Z5K2 747 758 WAPAL Wings apart-like protein homolog yes yes 2 5.544E-06 185.99 By MS/MS 3.5 0.5 1 1 2 1693400 1693400 0 8572 1798 8853 21209;21210 17034;17035 17034 2 72073 0 LLELFPVNR NSVTSSLRKANLDKRLLELFPVNRQSVDHF ANLDKRLLELFPVNRQSVDHFAKYFTDAGL R L L N R Q 0 1 1 0 0 0 1 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 9 0 1099.639 Q9Y6E2 Q9Y6E2 216 224 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.00098149 126.41 By MS/MS 6.5 0.5 1 1 2 3455300 3455300 0 8573 2942 8854 21211;21212 17036;17037 17037 2 34382 0 LLELGPKPEVAQQTR FKLKNFKTAATFARRLLELGPKPEVAQQTR LLELGPKPEVAQQTRKILSACEKNPTDAYQ R L L T R K 1 1 0 0 0 2 2 1 0 0 3 1 0 0 2 0 1 0 0 1 0 0 15 1 1677.9414 P53621 P53621 1128 1142 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.0021604 143.58 By MS/MS 2.29 1.03 2 2 2 1 7 5734800 5734800 0 8574 1034 8855 21213;21214;21215;21216;21217;21218;21219 17038;17039;17040;17041 17041 4 749970 0 LLELTGTIDK IVAHVDHGKSTLADRLLELTGTIDKTKNNK TLADRLLELTGTIDKTKNNKQVLDKLQVER R L L D K T 0 0 0 1 0 0 1 1 0 1 3 1 0 0 0 0 2 0 0 0 0 0 10 0 1101.6281 Q8N442 Q8N442 88 97 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.034862 88.496 By MS/MS 5 0 1 1 0 0 0 8575 1914 8856 21220 17042 17042 1 0 0 LLENISPADVGGMEETR WESCFNKVLFPLLTKLLENISPADVGGMEE ENISPADVGGMEETRMRASTLLSKVFLQHL K L L T R M 1 1 1 1 0 0 3 2 0 1 2 0 1 0 1 1 1 0 0 1 0 0 17 0 1829.8829 Q92538 Q92538 1600 1616 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00046436 163.62 By MS/MS 2 0 1 1 512170 512170 0 8576 2050 8857 21221 17043 17043 990 1 173240 0 LLENPTINHQK IEEEFVSLVTGCCYRLLENPTINHQKNRPT CCYRLLENPTINHQKNRPTREAITHLLGVA R L L Q K N 0 0 2 0 0 1 1 0 1 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1305.7041 Q15021 Q15021 205 215 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0037552 107.21 By MS/MS 3 0 1 1 152010 152010 0 8577 1474 8858 21222 17044 17044 1 2781.3 0 LLEPFEVR TVLAASCARHRRSLRLLEPFEVRTRLLGWD RHRRSLRLLEPFEVRTRLLGWDDRAFYLEA R L L V R T 0 1 0 0 0 0 2 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 8 0 1001.5546 Q8WUY1 Q8WUY1 113 120 THEM6 Protein THEM6 yes yes 2 0.0063562 107.29 By MS/MS 9 0.816 1 1 1 3 7628900 7628900 0 8578 2019 8859 21223;21224;21225 17045;17046 17045 2 155440 0 LLEPVLLLGK GRPLEMIEPRTLQYKLLEPVLLLGKERFAG TLQYKLLEPVLLLGKERFAGVDIRVRVKGG K L L G K E 0 0 0 0 0 0 1 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 10 0 1093.7111 P62249 P62249 51 60 RPS16 40S ribosomal protein S16 yes yes 2 0.00026065 143.01 By MS/MS By MS/MS 9.25 0.829 1 1 2 3 1 37949000 37838000 111730 8579 1145 8860 21226;21227;21228;21229 17047;17048;17049;17050;17051;17052 17050 6 1997600 143050 LLEPVLLLGKER GRPLEMIEPRTLQYKLLEPVLLLGKERFAG QYKLLEPVLLLGKERFAGVDIRVRVKGGGH K L L E R F 0 1 0 0 0 0 2 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 12 1 1378.8548 P62249 P62249 51 62 RPS16 40S ribosomal protein S16 yes yes 2 0.00036162 147.28 By MS/MS 9.5 0.5 1 1 2 4090300 4090300 0 8580 1145 8861 21230;21231 17053;17054;17055 17055 3 213990 0 LLEQALVIEEQLR NFLEIKNKFLARRFKLLEQALVIEEQLRRA FKLLEQALVIEEQLRRAAYLNMSEDPSHPS K L L L R R 1 1 0 0 0 2 3 0 0 1 4 0 0 0 0 0 0 0 0 1 0 0 13 0 1552.8825 Q14839;Q8TDI0;Q12873 Q14839 1788 1800 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0016747 113.95 By MS/MS 2 0 1 1 57066 57066 0 8581 1459 8862 21232 17056 17056 1 19302 0 LLEQGLR RLLRASGRTPEAVQKLLEQGLRHSQDLAFL RTPEAVQKLLEQGLRHSQDLAFLSMLNDIA K L L L R H 0 1 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 827.4865 P49327 P49327 437 443 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.013192 127.12 By MS/MS 4 2 1 1 1 1 1 1 1 7 31500000 31500000 0 8582 946 8863 21233;21234;21235;21236;21237;21238;21239 17057;17058;17059 17059 3 4531200 0 LLEQILVAENRDR LLQAPELETRVQAARLLEQILVAENRDRVA ARLLEQILVAENRDRVARIGLGVILNLAKE R L L D R V 1 2 1 1 0 1 2 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 13 1 1567.8682 Q6SZW1 Q6SZW1 147 159 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.0056269 123.62 By MS/MS 5 0 1 1 835230 835230 0 8583 1726 8864 21240 17060 17060 1 8377 0 LLESGFDPNIRDSR LLQACIDGDFNYSKRLLESGFDPNIRDSRG RLLESGFDPNIRDSRGRTGLHLAAARGNVD R L L S R G 0 2 1 2 0 0 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1617.8111 Q86W74 Q86W74 31 44 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 3 0.051327 61.233 By MS/MS 8.5 0.5 1 1 2 2115200 2115200 0 8584 1837 8865 21241;21242 17061 17061 1 29108 0 LLESLDQLELR GRFCRSSSMADRSSRLLESLDQLELRVEAL RSSRLLESLDQLELRVEALREAATAVEQEK R L L L R V 0 1 0 1 0 1 2 0 0 0 5 0 0 0 0 1 0 0 0 0 0 0 11 0 1327.7347 O95816 O95816 28 38 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 5.2502E-13 228.64 By MS/MS 8.5 0.5 1 1 2 951310 951310 0 8585 428 8866 21243;21244 17062;17063 17063 2 12883 0 LLESLEEQEVK LVLAKRRGVNKDVIRLLESLEEQEVKGFNR DVIRLLESLEEQEVKGFNRGTHSKLETMQT R L L V K G 0 0 0 0 0 1 4 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1315.6871 Q86W74 Q86W74 127 137 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 2 4.8854E-10 251.56 By MS/MS 8.5 0.5 1 1 2 393770 393770 0 8586 1837 8867 21245;21246 17064;17065 17065 2 7749.5 0 LLESLEEQEVKGFNR LVLAKRRGVNKDVIRLLESLEEQEVKGFNR LLESLEEQEVKGFNRGTHSKLETMQTAESE R L L N R G 0 1 1 0 0 1 4 1 0 0 3 1 0 1 0 1 0 0 0 1 0 0 15 1 1789.921 Q86W74 Q86W74 127 141 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 3 0.013878 82.543 By MS/MS 8 0 1 1 794110 794110 0 8587 1837 8868 21247 17066 17066 1 10026 0 LLETCSIALVGK KMLMKWKEMADRYDRLLETCSIALVGKYTK YDRLLETCSIALVGKYTKFSDSYASVIKAL R L L G K Y 1 0 0 0 1 0 1 1 0 1 3 1 0 0 0 1 1 0 0 1 0 0 12 0 1302.7217 P17812 P17812 295 306 CTPS1 CTP synthase 1 yes yes 2 6.6677E-06 182.46 By MS/MS 5 0 1 1 1402500 1402500 0 8588 645 8869 21248 17067 17067 1 14067 0 LLETECPQYIR IKGNFHAVYRDDLKKLLETECPQYIRKKGA DLKKLLETECPQYIRKKGADVWFKELDINT K L L I R K 0 1 0 0 1 1 2 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 11 0 1420.7021 P05109 P05109 37 47 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 2 2.0587E-19 232.83 By MS/MS By MS/MS 5.5 3.2 2 1 1 1 1 1 1 1 1 2 2 10 4392400 258720 4133700 8589 486 8870 21249;21250;21251;21252;21253;21254;21255;21256;21257;21258;21259;21260 17068;17069;17070;17071;17072;17073;17074;17075;17076;17077;17078;17079 17069 12 49142 4400100 LLETHIHNQGLAAIEK NLVSRIQDGLGELKKLLETHIHNQGLAAIE LETHIHNQGLAAIEKCGEAALNDPKMYVQT K L L E K C 2 0 1 0 0 1 2 1 2 2 3 1 0 0 0 0 1 0 0 0 0 0 16 0 1785.9737 Q13616 Q13616 339 354 CUL1 Cullin-1 yes yes 3 0.012418 86.641 By MS/MS 4 0 1 1 1265000 1265000 0 8590 1402 8871 21261 17080 17080 1 119040 0 LLETLFVHR VHLACICHSFHYIKRLLETLFVHRFSHGTM FHYIKRLLETLFVHRFSHGTMPLRNIFKNC R L L H R F 0 1 0 0 0 0 1 0 1 0 3 0 0 1 0 0 1 0 0 1 0 0 9 0 1126.6499 Q9NZ01 Q9NZ01 142 150 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.0080709 103.83 By MS/MS 2 0 1 1 68514 68514 0 8591 2642 8872 21262 17081 17081 1 23174 0 LLETTDRPDGHQNNLR ATYCLSSSFELIVQKLLETTDRPDGHQNNL LETTDRPDGHQNNLRSSAYESLMEIVKNSA K L L L R S 0 2 2 2 0 1 1 1 1 0 3 0 0 0 1 0 2 0 0 0 0 0 16 1 1877.9344 Q14974 Q14974 510 525 KPNB1 Importin subunit beta-1 yes yes 3 0.00043926 126.56 By MS/MS 5.5 1.12 1 1 1 1 4 6485800 6485800 0 8592 1462 8873 21263;21264;21265;21266 17082;17083;17084 17082 3 463710 0 LLETTEEDKQK KEMKAAAREEAKNIKLLETTEEDKQKNFLF KNIKLLETTEEDKQKNFLFLRLWDRNMDIA K L L Q K N 0 0 0 1 0 1 3 0 0 0 2 2 0 0 0 0 2 0 0 0 0 0 11 1 1332.6773 Q7L0Y3 Q7L0Y3 165 175 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 4.903E-13 244.61 By MS/MS 7 0 1 1 4369600 4369600 0 8593 1759 8874 21267 17085 17085 1 68595 0 LLETTEEDKQKNFLFLR KEMKAAAREEAKNIKLLETTEEDKQKNFLF ETTEEDKQKNFLFLRLWDRNMDIAMGWKGA K L L L R L 0 1 1 1 0 1 3 0 0 0 4 2 0 2 0 0 2 0 0 0 0 0 17 2 2123.1263 Q7L0Y3 Q7L0Y3 165 181 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 0.0045292 98.676 By MS/MS 7 0 1 1 1593700 1593700 0 8594 1759 8875 21268 17086 17086 1 25017 0 LLETVIDVSTADR GSNRALFRQPDLVLRLLETVIDVSTADRAI LRLLETVIDVSTADRAIPESQIRQVIHLIL R L L D R A 1 1 0 2 0 0 1 0 0 1 2 0 0 0 0 1 2 0 0 2 0 0 13 0 1430.7617 P57678 P57678 457 469 GEMIN4 Gem-associated protein 4 yes yes 2 2.881E-08 222.18 By MS/MS 4 0 1 1 1513400 1513400 0 8595 1079 8876 21269 17087 17087 1 142420 0 LLEVEHPAAK IGDVTITNDGATILKLLEVEHPAAKVLCEL ATILKLLEVEHPAAKVLCELADLQDKEVGD K L L A K V 2 0 0 0 0 0 2 0 1 0 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1105.6132 P17987 P17987 64 73 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.00042349 134.77 By MS/MS By matching 5.76 3.06 2 2 2 3 2 2 2 2 16 1 56665000 56573000 92203 8596 648 8877 21270;21271;21272;21273;21274;21275;21276;21277;21278;21279;21280;21281;21282;21283;21284;21285;21286 17088;17089;17090;17091;17092;17093;17094 17091 5 725670 94482 LLEVIILQCK LTGVAGEDAECHAAKLLEVIILQCKGRGID CHAAKLLEVIILQCKGRGIDQCIPLFVEAA K L L C K G 0 0 0 0 1 1 1 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1227.7261 O95373;O15397 O95373 741 750 IPO7;IPO8 Importin-7;Importin-8 no no 2 1.3556E-07 188.46 By MS/MS 3.5 0.5 1 1 2 444570 444570 0 8597 406;188 8878 21287;21288 17095;17096;17097 17097 3 35264 0 LLEVQGSRPGK MSDSEKLNLDSIIGRLLEVQGSRPGKNVQL IIGRLLEVQGSRPGKNVQLTENEIRGLCLK R L L G K N 0 1 0 0 0 1 1 2 0 0 2 1 0 0 1 1 0 0 0 1 0 0 11 1 1182.6721 P62136 P62136 16 26 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.013558 97.597 By MS/MS 7.5 1.12 1 1 1 1 4 2470500 2470500 0 8598 1139 8879 21289;21290;21291;21292 17098;17099 17098 1 30402 0 LLEVQSQVEELQK RKNELETENRLVNQRLLEVQSQVEELQKSL QRLLEVQSQVEELQKSLQDQGSKAEDSVLL R L L Q K S 0 0 0 0 0 3 3 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 13 0 1541.8301 Q86VS8 Q86VS8 517 529 HOOK3 Protein Hook homolog 3 yes yes 2 6.2988E-12 242.97 By MS/MS 4.5 0.5 1 1 2 2249200 2249200 0 8599 1832 8880 21293;21294 17100 17100 1 76266 0 LLFDGLQQPVLNK LVKCIGEETKYESIRLLFDGLQQPVLNKQL IRLLFDGLQQPVLNKQLTYVLLDIVIQELF R L L N K Q 0 0 1 1 0 2 0 1 0 0 4 1 0 1 1 0 0 0 0 1 0 0 13 0 1483.8399 Q9Y5W7 Q9Y5W7 902 914 SNX14 Sorting nexin-14 yes yes 2 0.0015656 115.91 By MS/MS 4 0 1 1 629850 629850 0 8600 2925 8881 21295 17101 17101 1 59274 0 LLFDQFMKK KDCSVPNPSWNKDLRLLFDQFMKKCEDGSW WNKDLRLLFDQFMKKCEDGSWKRLPSYKRT R L L K K C 0 0 0 1 0 1 0 0 0 0 2 2 1 2 0 0 0 0 0 0 0 0 9 1 1168.6315 Q5T1C6 Q5T1C6 59 67 THEM4 Acyl-coenzyme A thioesterase THEM4 yes yes 3 0.043007 72.23 By MS/MS 1 0 1 1 57383 57383 0 8601 1628 8882 21296 17102 17102 892 0 13827 0 LLFGPTVR AHTRYFRGGMLTNARLLFGPTVRLPDLIIF GMLTNARLLFGPTVRLPDLIIFLHTLNNIF R L L V R L 0 1 0 0 0 0 0 1 0 0 2 0 0 1 1 0 1 0 0 1 0 0 8 0 901.53854 Q9Y399 Q9Y399 181 188 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.051818 81.784 By MS/MS 9 0.816 1 1 1 3 4854500 4854500 0 8602 2860 8883 21297;21298;21299 17103 17103 1 67974 0 LLFPAVDDNLLK ASPRYIFTMLSTLARLLFPAVDDNLLKFLY LARLLFPAVDDNLLKFLYDDNQRVEPEWYI R L L L K F 1 0 1 2 0 0 0 0 0 0 4 1 0 1 1 0 0 0 0 1 0 0 12 0 1356.7653 Q02880 Q02880 837 848 TOP2B DNA topoisomerase 2-beta yes yes 2 0.05079 68.893 By MS/MS 4 0 1 1 68033 68033 0 8603 1282 8884 21300 17104 17104 1 6402.4 0 LLFYATSR DKFTWKKSQMKEEGKLLFYATSRAYVESIC QMKEEGKLLFYATSRAYVESICSNNFDSFL K L L S R A 1 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 1 0 1 0 0 0 8 0 969.52837 Q7Z2W4 Q7Z2W4 784 791 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0076078 113.41 By MS/MS 4 0 1 1 2451000 2451000 0 8604 1778 8885 21301 17105 17105 1 230650 0 LLFYDEVSR LSSVLLYRSAPEDLRLLFYDEVSRLESFWA APEDLRLLFYDEVSRLESFWALRVVCQEQL R L L S R L 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 1 0 0 1 1 0 0 9 0 1140.5815 Q8N1F8 Q8N1F8 1034 1042 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.0022754 117.81 By MS/MS 3 0 1 1 205560 205560 0 8605 1904 8886 21302 17106 17106 1 3761.1 0 LLGASELPIVTPALR IGMVVKTGVVPQLVKLLGASELPIVTPALR LLGASELPIVTPALRAIGNIVTGTDEQTQV K L L L R A 2 1 0 0 0 0 1 1 0 1 4 0 0 0 2 1 1 0 0 1 0 0 15 0 1548.9239 P52292 P52292 301 315 KPNA2 Importin subunit alpha-1 yes yes 2 0.0003814 166.14 By MS/MS 7 0.816 1 1 1 3 10684000 10684000 0 8606 1013 8887 21303;21304;21305 17107;17108;17109;17110 17109 4 77493 0 LLGCEQLLTAVPGR TPVKPTALTGTLQVRLLGCEQLLTAVPGRS RLLGCEQLLTAVPGRSPAAALASSPSEGWL R L L G R S 1 1 0 0 1 1 1 2 0 0 4 0 0 0 1 0 1 0 0 1 0 0 14 0 1525.8286 Q6P5Z2 Q6P5Z2 285 298 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.010047 94.767 By MS/MS 4 0 1 1 116970 116970 0 8607 1714 8888 21306 17111 17111 0 11008 0 LLGFLDVENTPCAR APPEPGEPEERKSLKLLGFLDVENTPCARH KLLGFLDVENTPCARHSILYGSLGSVVAGF K L L A R H 1 1 1 1 1 0 1 1 0 0 3 0 0 1 1 0 1 0 0 1 0 0 14 0 1603.8028 Q5RI15 Q5RI15 18 31 COX20 Cytochrome c oxidase protein 20 homolog yes yes 2 2.4865E-07 213.35 By MS/MS 10 0 1 1 145760 145760 0 8608 1616 8889 21307 17112 17112 1 7855.9 0 LLGGLAVR RGLCAIAQAESLRYKLLGGLAVRRACYGVL AESLRYKLLGGLAVRRACYGVLRFIMESGA K L L V R R 1 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 797.51232 P23396 P23396 109 116 RPS3 40S ribosomal protein S3 yes yes 2 0.0033931 132.94 By MS/MS 5.71 3.37 1 1 1 1 1 1 1 7 62309000 62309000 0 8609 703 8890 21308;21309;21310;21311;21312;21313;21314 17113;17114;17115;17116;17117;17118 17116 6 962930 0 LLGLTGSTK DVEAMARYVQDFHPRLLGLTGSTKQVAQAS QDFHPRLLGLTGSTKQVAQASHSYRVYYNA R L L T K Q 0 0 0 0 0 0 0 2 0 0 3 1 0 0 0 1 2 0 0 0 0 0 9 0 888.52803 O43819 O43819 188 196 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.04185 79.474 By MS/MS 9 0.816 1 1 1 3 7240300 7240300 0 8610 238 8891 21315;21316;21317 17119 17119 1 100620 0 LLGNLVVK TGLVEAALGPEVLSRLLGNLVVKNKKAQFV GPEVLSRLLGNLVVKNKKAQFVMTQKLLFL R L L V K N 0 0 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 2 0 0 8 0 854.55894 Q9Y4R8 Q9Y4R8 284 291 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0043769 128.38 By MS/MS 4 0 1 1 1691700 1691700 0 8611 2900 8892 21318 17120 17120 1 159200 0 LLGPDAAINLTDPDGALAK LAALKQQLVASHLEKLLGPDAAINLTDPDG DAAINLTDPDGALAKRLLLQLEATKNSKGG K L L A K R 4 0 1 3 0 0 0 2 0 1 4 1 0 0 2 0 1 0 0 0 0 0 19 0 1863.9942 Q13561 Q13561 157 175 DCTN2 Dynactin subunit 2 yes yes 2 7.2297E-05 201.72 By MS/MS 6.5 0.5 1 1 2 12852000 12852000 0 8612 1397 8893 21319;21320 17121 17121 1 89766 0 LLGPDAAINLTDPDGALAKR LAALKQQLVASHLEKLLGPDAAINLTDPDG AAINLTDPDGALAKRLLLQLEATKNSKGGS K L L K R L 4 1 1 3 0 0 0 2 0 1 4 1 0 0 2 0 1 0 0 0 0 0 20 1 2020.0953 Q13561 Q13561 157 176 DCTN2 Dynactin subunit 2 yes yes 3 0.00095841 96.096 By MS/MS 6 0 1 1 4161200 4161200 0 8613 1397 8894 21321 17122 17122 1 28605 0 LLGPVLVK KEELALLDGSNVVFKLLGPVLVKQELGEAR GSNVVFKLLGPVLVKQELGEARATVGKRLD K L L V K Q 0 0 0 0 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 2 0 0 8 0 837.56878 O15212 O15212 59 66 PFDN6 Prefoldin subunit 6 yes yes 2 0.033578 88.734 By MS/MS 10 0 1 1 546880 546880 0 8614 170 8895 21322 17123 17123 1 29475 0 LLGQPSLDSLPIPAPR GSGKTLSYLLPLLQRLLGQPSLDSLPIPAP LGQPSLDSLPIPAPRGLVLVPSRELAQQVR R L L P R G 1 1 0 1 0 1 0 1 0 1 4 0 0 0 4 2 0 0 0 0 0 0 16 0 1672.9512 Q9NUL7 Q9NUL7 190 205 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.00045261 165.51 By MS/MS 6 0 1 1 2496100 2496100 0 8615 2582 8896 21323 17124 17124 1 17159 0 LLGSLSNAYSPR LVVAGSGGHTTEILRLLGSLSNAYSPRHYV ILRLLGSLSNAYSPRHYVIADTDEMSANKI R L L P R H 1 1 1 0 0 0 0 1 0 0 3 0 0 0 1 3 0 0 1 0 0 0 12 0 1276.6776 Q96F25 Q96F25 55 66 ALG14 UDP-N-acetylglucosamine transferase subunit ALG14 homolog yes yes 2 4.859E-06 187.42 By MS/MS 9 0 1 1 200900 200900 0 8616 2153 8897 21324 17125;17126 17125 2 3953.7 0 LLGVLAESCGGK RPVLIHRAVLGSVERLLGVLAESCGGKWPL VERLLGVLAESCGGKWPLWLSPFQVVVIPV R L L G K W 1 0 0 0 1 0 1 3 0 0 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1202.6329 Q9BW92 Q9BW92 595 606 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0010737 123.79 By MS/MS 4.5 0.5 1 1 2 1321700 1321700 0 8617 2346 8898 21325;21326 17127 17127 1 36502 0 LLGYVATLK ATCVRLLGRNSNSKRLLGYVATLKDNFGFI NSNSKRLLGYVATLKDNFGFIETANHDKEI R L L L K D 1 0 0 0 0 0 0 1 0 0 3 1 0 0 0 0 1 0 1 1 0 0 9 0 976.59572 O75534 O75534 519 527 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.013996 93.429 By MS/MS 4.5 0.5 1 1 2 2616400 2616400 0 8618 333 8899 21327;21328 17128 17128 1 224680 0 LLHEVQELTTEVEK EGLGVKETPQQKYQRLLHEVQELTTEVEKI RLLHEVQELTTEVEKIKTTVKESATEEKLT R L L E K I 0 0 0 0 0 1 4 0 1 0 3 1 0 0 0 0 2 0 0 2 0 0 14 0 1666.8778 Q13561 Q13561 106 119 DCTN2 Dynactin subunit 2 yes yes 2 6.8328E-05 181.98 By MS/MS 6 0 1 1 8840900 8840900 0 8619 1397 8900 21329 17129 17129 1 60775 0 LLHEVQELTTEVEKIK EGLGVKETPQQKYQRLLHEVQELTTEVEKI LHEVQELTTEVEKIKTTVKESATEEKLTPV R L L I K T 0 0 0 0 0 1 4 0 1 1 3 2 0 0 0 0 2 0 0 2 0 0 16 1 1908.0568 Q13561 Q13561 106 121 DCTN2 Dynactin subunit 2 yes yes 3 6.8421E-05 184.87 By MS/MS 6 0 1 1 4356700 4356700 0 8620 1397 8901 21330 17130 17130 1 29949 0 LLHVAVSDVNDDVR AMAYCGSGNNKAIRRLLHVAVSDVNDDVRR RLLHVAVSDVNDDVRRAAVESLGFILFRTP R L L V R R 1 1 1 3 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 4 0 0 14 0 1550.8053 Q99460 Q99460 602 615 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 0.00059414 158.06 By MS/MS 4 0 3 3 3557500 3557500 0 8621 2246 8902 21331;21332;21333 17131;17132;17133 17132 3 334790 0 LLHVAVSDVNDDVRR AMAYCGSGNNKAIRRLLHVAVSDVNDDVRR LLHVAVSDVNDDVRRAAVESLGFILFRTPE R L L R R A 1 2 1 3 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 4 0 0 15 1 1706.9064 Q99460 Q99460 602 616 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 1.9223E-06 240 By MS/MS 4 0 1 1 1184000 1184000 0 8622 2246 8903 21334 17134 17134 1 111420 0 LLIDEAILK DALANLKVSQIKKVRLLIDEAILKCDAERI QIKKVRLLIDEAILKCDAERIKLEAERFEN R L L L K C 1 0 0 1 0 0 1 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1026.6325 P49591 P49591 108 116 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 0.019965 88.948 By MS/MS 6 0 1 1 1364100 1364100 0 8623 952 8904 21335 17135 17135 1 9377.5 0 LLIDGDGAGDDRR ______________________________ KRLLIDGDGAGDDRRINLLVKSFIKWCNSG R L L R R I 1 2 0 4 0 0 0 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 13 1 1371.6743 Q6I9Y2 Q6I9Y2 14 26 THOC7 THO complex subunit 7 homolog yes yes 3 0.031224 70.488 By MS/MS 9 0 1 1 400040 400040 0 8624 1679 8905 21336 17136 17136 1 7872.8 0 LLIESLEK DVVLPALHFHQGDSKLLIESLEKYVVLCES FHQGDSKLLIESLEKYVVLCESPQDKRTLL K L L E K Y 0 0 0 0 0 0 2 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 0 943.559 Q8TC07 Q8TC07 172 179 TBC1D15 TBC1 domain family member 15 yes yes 2 0.03848 86.866 By MS/MS 5 0 1 1 2039400 2039400 0 8625 1987 8906 21337 17137 17137 1 20454 0 LLIIGTTSR ALLVLLKKAPPQGRKLLIIGTTSRKDVLQE PPQGRKLLIIGTTSRKDVLQEMEMLNAFST K L L S R K 0 1 0 0 0 0 0 1 0 2 2 0 0 0 0 1 2 0 0 0 0 0 9 0 972.59678 P46459 P46459 640 648 NSF Vesicle-fusing ATPase yes yes 2 0.013277 95.741 By MS/MS 5 0 1 1 2858400 2858400 0 8626 912 8907 21338 17138 17138 1 28668 0 LLILALER SPIPFPPLSYKHDTKLLILALERLKEAYSV SYKHDTKLLILALERLKEAYSVKSRLNQSQ K L L E R L 1 1 0 0 0 0 1 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 8 0 939.6117 Q6P2Q9 Q6P2Q9 838 845 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0027337 136.11 By MS/MS 2.5 1.12 1 1 1 1 4 1569600 1569600 0 8627 1708 8908 21339;21340;21341;21342 17139;17140;17141;17142 17142 4 445130 0 LLILMEAR PEMQYVKIKDVARGRLLILMEARLSALYKL KDVARGRLLILMEARLSALYKLESDYEILE R L L A R L 1 1 0 0 0 0 1 0 0 1 3 0 1 0 0 0 0 0 0 0 0 0 8 0 957.56812 P41252 P41252 255 262 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0048311 126.28 By MS/MS 3.5 0.5 2 2 4 3109500 3109500 0 8628 871 8909;8910 21343;21344;21345;21346 17143;17144 17144 456 2 80334 0 LLIVSTTPYSEK SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK LDRLLIVSTTPYSEKDTKQILRIRCEEEDV R L L E K D 0 0 0 0 0 0 1 0 0 1 2 1 0 0 1 2 2 0 1 1 0 0 12 0 1349.7442 Q9Y230 Q9Y230 354 365 RUVBL2 RuvB-like 2 yes yes 2 5.3862E-05 169.58 By MS/MS 6.5 0.5 1 1 2 16584000 16584000 0 8629 2810 8911 21347;21348 17145;17146 17145 1 118860 0 LLIVSTTPYSEKDTK SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK LLIVSTTPYSEKDTKQILRIRCEEEDVEMS R L L T K Q 0 0 0 1 0 0 1 0 0 1 2 2 0 0 1 2 3 0 1 1 0 0 15 1 1693.9138 Q9Y230 Q9Y230 354 368 RUVBL2 RuvB-like 2 yes yes 2 0.0030772 130.56 By MS/MS 6 0 1 1 8858300 8858300 0 8630 2810 8912 21349 17147 17147 1 60894 0 LLIWLSGPK L L P K 0 0 0 0 0 0 0 1 0 1 3 1 0 0 1 1 0 1 0 0 0 0 9 0 1025.6274 REV__Q6P4A7 yes yes 2 0.010244 80.229 By MS/MS 4 0 1 1 983580 983580 0 + 8631 2970 8913 21350 17148 17148 1 92562 0 LLIYKVSNR TYLSWLQQRPGQPPRLLIYKVSNRFSGVPD PGQPPRLLIYKVSNRFSGVPDRFSGSGAGT R L L N R F 0 1 1 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1104.6655 A0A075B6R9 A0A075B6R9 71 79 IGKV2D-24 yes yes 2 0.011213 117.89 By MS/MS By MS/MS 8.71 0.7 3 3 1 6 1 14059000 14059000 0 8632 0 8914 21351;21352;21353;21354;21355;21356;21357 17149;17150;17151;17152;17153 17150 5 219470 0 LLKAAFLQYCR TTTKNETIAQEDKIKLLKAAFLQYCRKDLG DKIKLLKAAFLQYCRKDLGHAQMVVDELFS K L L C R K 2 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 11 1 1381.754 Q8WUM0 Q8WUM0 521 531 NUP133 Nuclear pore complex protein Nup133 yes yes 3 0.043247 65.347 By MS/MS 4.5 0.5 1 1 2 2688800 2688800 0 8633 2017 8915 21358;21359 17154 17154 1 41319 0 LLKEGSSNQR QRALPSEELNRQLEKLLKEGSSNQRVFDWI RQLEKLLKEGSSNQRVFDWIEANLSEQQIV K L L Q R V 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 1 1130.6044 Q04637 Q04637 1450 1459 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00016362 159.34 By MS/MS 4 1.78 1 2 2 2 2 2 1 12 10336000 10336000 0 8634 1291 8916 21360;21361;21362;21363;21364;21365;21366;21367;21368;21369;21370;21371 17155;17156;17157;17158;17159;17160 17155 6 2651300 0 LLKEQEIEDQKNPR DIKLFKHNDMADLERLLKEQEIEDQKNPRK RLLKEQEIEDQKNPRKARVTRRFIVVEGLY R L L P R K 0 1 1 1 0 2 3 0 0 1 2 2 0 0 1 0 0 0 0 0 0 0 14 2 1738.9214 O15269 O15269 220 233 SPTLC1 Serine palmitoyltransferase 1 yes yes 2;3;4 1.9433E-32 308.6 By MS/MS By matching 6.57 0.728 4 2 1 6 1 26238000 26175000 63084 8635 177 8917 21372;21373;21374;21375;21376;21377;21378 17161;17162;17163;17164 17163 4 202570 64644 LLKHPNIVR ARDHQKLEREARICRLLKHPNIVRLHDSIS EARICRLLKHPNIVRLHDSISEEGFHYLVF R L L V R L 0 1 1 0 0 0 0 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 9 1 1088.6818 Q13555;Q9UQM7;Q13557 Q13555 67 75 CAMK2G;CAMK2A;CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 3 0.00090204 128.61 By MS/MS 6 0 1 1 966130 966130 0 8636 1396 8918 21379 17165 17165 1 6641.4 0 LLKKPDQGR NHEPLRTQCALAASKLLKKPDQGRAVSTCA ALAASKLLKKPDQGRAVSTCAHLFWSGRNT K L L G R A 0 1 0 1 0 1 0 1 0 0 2 2 0 0 1 0 0 0 0 0 0 0 9 2 1053.6295 Q96QK1 Q96QK1 660 668 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.021521 86.67 By MS/MS 5 0 1 1 878490 878490 0 8637 2217 8919 21380 17166 17166 1 8810.8 0 LLKNHDEESLECLCR LKMLTEAIMHDCVVKLLKNHDEESLECLCR LLKNHDEESLECLCRLLTTIGKDLDFEKAK K L L C R L 0 1 1 1 2 0 3 0 1 0 4 1 0 0 0 1 0 0 0 0 0 0 15 1 1914.8928 Q04637;O43432 Q04637 923 937 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 3 0.00066298 194.77 By MS/MS 2 0 1 1 2629000 2629000 0 8638 1291;210 8920 21381 17167 17167 1 889230 0 LLKPECVLDK RLKALGTLVSHVTLRLLKPECVLDKSWCQE HVTLRLLKPECVLDKSWCQEELSVAVKRAV R L L D K S 0 0 0 1 1 0 1 0 0 0 3 2 0 0 1 0 0 0 0 1 0 0 10 1 1213.674 Q92616 Q92616 927 936 GCN1L1 Translational activator GCN1 yes yes 3 0.00957 89.171 By MS/MS 2 0 1 1 1162100 1162100 0 8639 2064 8921 21382 17168 17168 1 393060 0 LLLAALGR CETKKAYFLGYMVHRLLLAALGRRELDDRD LGYMVHRLLLAALGRRELDDRDHYGNKRLD R L L G R R 2 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 825.54362 P30876 P30876 372 379 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.02545 93.593 By MS/MS 3 0 1 1 87487 87487 0 8640 781 8922 21383 17169 17169 1 1600.8 0 LLLCGGAPLSATTQR FVFRKVRSLLGGNIRLLLCGGAPLSATTQR LLLCGGAPLSATTQRFMNICFCCPVGQGYG R L L Q R F 2 1 0 0 1 1 0 2 0 0 4 0 0 0 1 1 2 0 0 0 0 0 15 0 1556.8345 O95573 O95573 447 461 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 0.00040313 164.9 By MS/MS 3.6 1.85 1 1 1 1 1 5 11124000 11124000 0 8641 417 8923 21384;21385;21386;21387;21388 17170;17171;17172;17173 17173 4 221070 0 LLLDDLVPTSR AARHGERPGGEELSRLLLDDLVPTSRLELL ELSRLLLDDLVPTSRLELLFGMTPCLLALQ R L L S R L 0 1 0 2 0 0 0 0 0 0 4 0 0 0 1 1 1 0 0 1 0 0 11 0 1240.7027 Q6IN84 Q6IN84 38 48 MRM1 rRNA methyltransferase 1, mitochondrial yes yes 2 1.8107E-05 169.41 By MS/MS 7.5 0.5 1 1 2 242770 242770 0 8642 1684 8924 21389;21390 17174;17175 17174 2 3811 0 LLLDEITR KAIARFFPKPYDDSRLLLDEITRAQDLFLD KPYDDSRLLLDEITRAQDLFLDGVPLRKTI R L L T R A 0 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 8 0 971.56515 Q63HN8 Q63HN8 2720 2727 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0023228 140.09 By MS/MS 1.5 0.5 1 1 2 365430 365430 0 8643 1664 8925 21391;21392 17176 17176 1 101220 0 LLLDPSSPPTK SSENEDSDQDREERKLLLDPSSPPTKALNG EERKLLLDPSSPPTKALNGAEPNYHSLPSA K L L T K A 0 0 0 1 0 0 0 0 0 0 3 1 0 0 3 2 1 0 0 0 0 0 11 0 1166.6547 Q6IAA8 Q6IAA8 21 31 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 2 0.029201 79.986 By MS/MS 10 0 1 1 261850 261850 0 8644 1680 8926 21393 17177 17177 1 14113 0 LLLEEDENEESGSIK ECLAEEIKIGDYYLRLLLEEDENEESGSIK LLLEEDENEESGSIKRSYEFFNELYHRFLL R L L I K R 0 0 1 1 0 0 5 1 0 1 3 1 0 0 0 2 0 0 0 0 0 0 15 0 1703.8101 O75165 O75165 834 848 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0010753 116.74 By MS/MS 2 0 1 1 286100 286100 0 8645 302 8927 21394 17178 17178 0 96770 0 LLLEEDENEESGSIKR ECLAEEIKIGDYYLRLLLEEDENEESGSIK LLEEDENEESGSIKRSYEFFNELYHRFLLT R L L K R S 0 1 1 1 0 0 5 1 0 1 3 1 0 0 0 2 0 0 0 0 0 0 16 1 1859.9113 O75165 O75165 834 849 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.045494 63.037 By MS/MS 2 0 1 1 1092300 1092300 0 8646 302 8928 21395 17179 17179 1 369450 0 LLLEGVENK AELSLVFVDKPEKAKLLLEGVENKLIPGLK KPEKAKLLLEGVENKLIPGLKIIVVMDAYG K L L N K L 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1013.5757 P33121 P33121 208 216 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.0010014 141.52 By MS/MS 5 0 1 1 1190300 1190300 0 8647 799 8929 21396 17180 17180 1 11938 0 LLLEQILNK LPHVFVNCVECFTLRLLLEQILNKLNHLSS ECFTLRLLLEQILNKLNHLSSSEDGCSTEI R L L N K L 0 0 1 0 0 1 1 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 9 0 1082.6699 O43913 O43913 71 79 ORC5 Origin recognition complex subunit 5 yes yes 2 0.0052749 108.74 By MS/MS 7 0 1 1 104370 104370 0 8648 245 8930 21397 17181 17181 1 1638.4 0 LLLFAIQR LAKIMRTRAKEIEVKLLLFAIQRTTNFEGF AKEIEVKLLLFAIQRTTNFEGFLAKRFSGC K L L Q R T 1 1 0 0 0 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 0 8 0 972.61204 Q5VIR6 Q5VIR6 343 350 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0033931 132.94 By MS/MS 4 0 1 1 170340 170340 0 8649 1644 8931 21398 17182 17182 1 16030 0 LLLGAGAVAYGVR GRLPAGPRGMGTALKLLLGAGAVAYGVRES LKLLLGAGAVAYGVRESVFTVEGGHRAIFF K L L V R E 3 1 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 1 2 0 0 13 0 1258.7398 Q99623 Q99623 25 37 PHB2 Prohibitin-2 yes yes 2 1.6853E-06 202.28 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 15543000 15510000 32492 8650 2254 8932 21399;21400;21401;21402;21403 17183;17184;17185;17186 17183 4 234030 58517 LLLGDLAPVR CVVGENGAGKSTMLKLLLGDLAPVRGIRHA STMLKLLLGDLAPVRGIRHAHRNLKIGYFS K L L V R G 1 1 0 1 0 0 0 1 0 0 4 0 0 0 1 0 0 0 0 1 0 0 10 0 1065.6546 Q9NUQ8 Q9NUQ8 537 546 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 2 0.00016053 149.82 By MS/MS 5 0 1 1 582210 582210 0 8651 2586 8933 21404 17187 17187 1 5839.3 0 LLLIGDSGVGK ______________________________ YLFKLLLIGDSGVGKSCLLLRFADDTYTES K L L G K S 0 0 0 1 0 0 0 3 0 1 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1070.6336 P51153;P59190;P61006;Q92930;P61026;P62820;Q9H0U4;Q92928 P62820 14 24 RAB13;RAB15;RAB8A;RAB8B;RAB10;RAB1A;RAB1B;RAB1C Ras-related protein Rab-13;Ras-related protein Rab-15;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-10;Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 2 0.0048081 104.42 By MS/MS 6 3.55 1 1 1 1 2 1 7 14804000 14804000 0 8652 1171;2416;1102;992;1106 8934 21405;21406;21407;21408;21409;21410;21411 17188;17189;17190;17191;17192 17191 5 374200 0 LLLINNAGSLGDVSK LGALRELPRPKGLQRLLLINNAGSLGDVSK LLLINNAGSLGDVSKGFVDLSDSTQVNNYW R L L S K G 1 0 2 1 0 0 0 2 0 1 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1512.8512 P35270 P35270 95 109 SPR Sepiapterin reductase yes yes 2 4.7449E-05 193.28 By MS/MS 8 0 1 1 628850 628850 0 8653 821 8935 21412 17193 17193 1 7939.2 0 LLLLAER VQSPYRSTKLVIIERLLLLAERYVITIEDF TKLVIIERLLLLAERYVITIEDFYSVPRTI R L L E R Y 1 1 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 826.52764 Q9UPU5 Q9UPU5 927 933 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.015433 121.29 By MS/MS 2 0 1 1 437580 437580 0 8654 2802 8936 21413 17194 17194 1 148010 0 LLLLDTQQEAGMLLR KKLSKAVEKRFPHDKLLLLDTQQEAGMLLR LLLLDTQQEAGMLLRQLANQKQQHLAFRDR K L L L R Q 1 1 0 1 0 2 1 1 0 0 6 0 1 0 0 0 1 0 0 0 0 0 15 0 1712.9495 Q2NL82 Q2NL82 220 234 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 0.00016159 178.15 By MS/MS 4 0 1 1 171810 171810 0 8655 1570 8937 21414 17195 17195 878 1 16168 0 LLLLGAGESGK KQLQKDKQVYRATHRLLLLGAGESGKSTIV ATHRLLLLGAGESGKSTIVKQMRILHVNGF R L L G K S 1 0 0 0 0 0 1 3 0 0 4 1 0 0 0 1 0 0 0 0 0 0 11 0 1056.6179 P08754;P11488;P63096;P19087;P09471;A8MTJ3;P38405;P63092;Q5JWF2;P04899 P63092 43 53 GNAI3;GNAT1;GNAI1;GNAT2;GNAO1;GNAT3;GNAL;GNAS;GNAI2 Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(i) subunit alpha-2 no no 2 0.00017035 145.72 By MS/MS 7.75 1.48 1 1 1 1 4 8455000 8455000 0 8656 1193;528;480 8938 21415;21416;21417;21418 17196;17197;17198 17196 3 130560 0 LLLLGSGVGTVR KSPLLSLEWATKRDRLLLLGSGVGTVRLYD RDRLLLLGSGVGTVRLYDTEAKKNLCEINI R L L V R L 0 1 0 0 0 0 0 3 0 0 4 0 0 0 0 1 1 0 0 2 0 0 12 0 1183.7289 A4D1P6 A4D1P6 465 476 WDR91 WD repeat-containing protein 91 yes yes 2 1.9005E-08 205.59 By MS/MS 4.5 0.5 1 1 2 845500 845500 0 8657 16 8939 21419;21420 17199;17200 17199 1 48365 0 LLLLGTGESGK RQLRRDKKDARRELKLLLLGTGESGKSTFI RELKLLLLGTGESGKSTFIKQMRIIHGSGY K L L G K S 0 0 0 0 0 0 1 3 0 0 4 1 0 0 0 1 1 0 0 0 0 0 11 0 1086.6285 O95837;P50148;P29992 O95837 38 48 GNA14;GNAQ;GNA11 Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-11 yes no 2 4.2719E-06 178.55 By MS/MS 7 0 1 1 1310600 1310600 0 8658 431 8940 21421 17201 17201 1 20573 0 LLLNLAENPAMTR LFSAGNEETKLQVLKLLLNLAENPAMTREL LKLLLNLAENPAMTRELLRAQVPSSLGSLF K L L T R E 2 1 2 0 0 0 1 0 0 0 4 0 1 0 1 0 1 0 0 0 0 0 13 0 1454.7915 Q9UH62 Q9UH62 266 278 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 0.0001639 166.11 By MS/MS 7 0 1 1 567730 567730 0 8659 2725 8941 21422 17202 17202 1156 1 8912.3 0 LLLNNDNLLR HAPPGEFNEVFNDVRLLLNNDNLLREGAAH FNDVRLLLNNDNLLREGAAHAFAQYNMDQF R L L L R E 0 1 3 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1196.6877 P47755;P52907 P52907 38 47 CAPZA2;CAPZA1 F-actin-capping protein subunit alpha-2;F-actin-capping protein subunit alpha-1 no no 2 0.0002603 143.03 By MS/MS 8.33 1.25 1 1 1 3 7132100 7132100 0 8660 1025;925 8942 21423;21424;21425 17203;17204;17205 17203 3 114740 0 LLLPGELAK KRSTITSREIQTAVRLLLPGELAKHAVSEG IQTAVRLLLPGELAKHAVSEGTKAVTKYTS R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 952.59572 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q96A08;A0A2R8Y619 Q99880 101 109 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B type 1-A yes no 2 0.0092734 101.72 By MS/MS By matching 10 0 2 1 1 9073200 8916100 157060 8661 279 8943 21426;21427 17206 17206 1 480540 201090 LLLQDSQNVEALR LALQDWDQTVETAQRLLLQDSQNVEALRMQ QRLLLQDSQNVEALRMQALYYVCREGDIEK R L L L R M 1 1 1 1 0 2 1 0 0 0 4 0 0 0 0 1 0 0 0 1 0 0 13 0 1497.8151 Q7Z4L5 Q7Z4L5 238 250 TTC21B Tetratricopeptide repeat protein 21B yes yes 2 1.4527E-05 199.8 By MS/MS 3.5 0.5 1 1 2 620250 620250 0 8662 1793 8944 21428;21429 17207 17207 1 29231 0 LLLQGLMDSVEAK LGYFPVGDGDFPHQKLLLQGLMDSVEAKQI QKLLLQGLMDSVEAKQIELQFTIGEAITSA K L L A K Q 1 0 0 1 0 1 1 1 0 0 4 1 1 0 0 1 0 0 0 1 0 0 13 0 1415.7694 Q5VYK3 Q5VYK3 880 892 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00023666 158.06 By MS/MS 2 0 2 2 752620 752620 0 8663 1656 8945 21430;21431 17208;17209 17208 898 2 254570 0 LLLQLEATK AAINLTDPDGALAKRLLLQLEATKNSKGGS GALAKRLLLQLEATKNSKGGSGGKTTGTPP R L L T K N 1 0 0 0 0 1 1 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 9 0 1027.6277 Q13561 Q13561 177 185 DCTN2 Dynactin subunit 2 yes yes 2 0.0014058 128.86 By MS/MS 6 0 1 1 3724000 3724000 0 8664 1397 8946 21432 17210 17210 1 25599 0 LLLQNELK VKNLTLQLEQESNKRLLLQNELKTQAFEAD EQESNKRLLLQNELKTQAFEADNLKGLEKQ R L L L K T 0 0 1 0 0 1 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 8 0 969.58588 Q13464 Q13464 784 791 ROCK1 Rho-associated protein kinase 1 yes yes 2 0.006339 119.29 By MS/MS 3 0 1 1 291310 291310 0 8665 1389 8947 21433 17211 17211 1 5330.2 0 LLLQVQHASK AAISKTAVAPIERVKLLLQVQHASKQITAD IERVKLLLQVQHASKQITADKQYKGIIDCV K L L S K Q 1 0 0 0 0 2 0 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1135.6713 P05141;P12235;P12236 P05141 34 43 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 7.5662E-05 155.58 By MS/MS By MS/MS 4.91 3.23 4 3 3 2 2 3 3 2 19 3 145200000 144610000 599590 8666 487;589;588 8948 21434;21435;21436;21437;21438;21439;21440;21441;21442;21443;21444;21445;21446;21447;21448;21449;21450;21451;21452;21453;21454;21455 17212;17213;17214;17215;17216;17217;17218;17219;17220;17221;17222;17223;17224;17225 17214 14 13387000 819520 LLLSGTADGADLR DQDDLENPMLETASKLLLSGTADGADLRTV SKLLLSGTADGADLRTVDPETQARLEALLE K L L L R T 2 1 0 2 0 0 0 2 0 0 4 0 0 0 0 1 1 0 0 0 0 0 13 0 1300.6987 O75179 O75179 153 165 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 2.2255E-13 215.72 By MS/MS 2 0.816 1 1 1 3 492330 492330 0 8667 304 8949 21456;21457;21458 17226;17227;17228 17228 3 139940 0 LLLTGTPLQNK KLTQVLNTHYVAPRRLLLTGTPLQNKLPEL APRRLLLTGTPLQNKLPELWALLNFLLPTI R L L N K L 0 0 1 0 0 1 0 1 0 0 4 1 0 0 1 0 2 0 0 0 0 0 11 0 1196.7129 P51532 P51532 907 917 SMARCA4 Transcription activator BRG1 yes yes 2 0.0018999 112.11 By MS/MS 2 0 1 1 141130 141130 0 8668 995 8950 21459 17229 17229 1 47736 0 LLLTPWVK LSAVSGEDTQDRTDRLLLTPWVKFLWESYR TQDRTDRLLLTPWVKFLWESYRQCLDLLRN R L L V K F 0 0 0 0 0 0 0 0 0 0 3 1 0 0 1 0 1 1 0 1 0 0 8 0 968.60589 Q14152 Q14152 144 151 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.01284 107.59 By MS/MS 5 2 1 1 1 1 1 1 1 7 3366000 3366000 0 8669 1422 8951 21460;21461;21462;21463;21464;21465;21466 17230;17231;17232;17233;17234 17230 5 109760 0 LLLWAQNELDQK YENRESTPKLAKLLKLLLWAQNELDQKKVK LLKLLLWAQNELDQKKVKYPKMTDLSKGVI K L L Q K K 1 0 1 1 0 2 1 0 0 0 4 1 0 0 0 0 0 1 0 0 0 0 12 0 1469.7878 Q9NWU2 Q9NWU2 198 209 GID8 Glucose-induced degradation protein 8 homolog yes yes 2 4.0879E-06 190.57 By MS/MS 8 0 1 1 322340 322340 0 8670 2613 8952 21467 17235 17235 1 4069.6 0 LLMHGKEVGSIIGK TGVIEGGLNVTLTIRLLMHGKEVGSIIGKK RLLMHGKEVGSIIGKKGESVKKMREESGAR R L L G K K 0 0 0 0 0 0 1 3 1 2 2 2 1 0 0 1 0 0 0 1 0 0 14 1 1480.8436 P57721;Q15365;Q15366 Q15366 18 31 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 3 0.00026672 139.78 By MS/MS 7 0 2 2 2536300 2536300 0 8671 1501;1500;1080 8953;8954 21468;21469 17236;17237 17237 605 2 39815 0 LLMLGLDNAGK LTILKKMKQKERELRLLMLGLDNAGKTTIL RELRLLMLGLDNAGKTTILKKFNGEDIDTI R L L G K T 1 0 1 1 0 0 0 2 0 0 4 1 1 0 0 0 0 0 0 0 0 0 11 0 1143.6322 P36404 P36404 19 29 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.00014717 147.75 By MS/MS 9.5 0.5 1 1 2 885470 885470 0 8672 832 8955 21470;21471 17238;17239 17238 2 19468 0 LLMMAGIDDCYTSAR APRGTGIVSAPVPKKLLMMAGIDDCYTSAR LLMMAGIDDCYTSARGCTATLGNFAKATFD K L L A R G 2 1 0 2 1 0 0 1 0 1 2 0 2 0 0 1 1 0 1 0 0 0 15 0 1715.7681 P15880 P15880 213 227 RPS2 40S ribosomal protein S2 yes yes 2 1.6515E-05 196.11 By MS/MS 8 0 1 1 1504600 1504600 0 8673 627 8956 21472 17240 17240 299;300 1 18995 0 LLMSEDYFTQAMEVK QNIVFNAETYSNLIKLLMSEDYFTQAMEVK LLMSEDYFTQAMEVKAFAETHIKGFTLNDA K L L V K A 1 0 0 1 0 1 2 0 0 0 2 1 2 1 0 1 1 0 1 1 0 0 15 0 1803.8423 P42704 P42704 1076 1090 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.0574E-44 336.16 By MS/MS By matching 3 0 3 2 1 722720 672380 50334 8674 886 8957;8958 21473;21474;21475 17241;17242;17243 17241 468;469 3 12303 6406.7 LLNDEDPVVVTK DDAELATRALPELTKLLNDEDPVVVTKAAM LTKLLNDEDPVVVTKAAMIVNQLSKKEASR K L L T K A 0 0 1 2 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 3 0 0 12 0 1340.7187 P14923 P14923 150 161 JUP Junction plakoglobin yes yes 2 3.6335E-10 206.36 By MS/MS By MS/MS 4 0.816 1 1 1 2 1 6056600 1408000 4648600 8675 621 8959 21476;21477;21478 17244;17245;17246 17244 3 132500 591700 LLNENSYVPR LSEKLDSTDFTGTIKLLNENSYVPREAGSQ TGTIKLLNENSYVPREAGSQKDENLALYVE K L L P R E 0 1 2 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 10 0 1203.6248 P02786 P02786 146 155 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0001459 150.81 By MS/MS By MS/MS 4.75 0.829 2 1 1 3 1 3878100 3825800 52292 8676 458 8960 21479;21480;21481;21482 17247;17248 17248 2 284060 111420 LLNFLMK ATPTGVPKDEVLANRLLNFLMKHVFHPKRA KDEVLANRLLNFLMKHVFHPKRAVFRHNLE R L L M K H 0 0 1 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 7 0 877.50955 P78527 P78527 2215 2221 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.040508 95.793 By MS/MS 1.5 0.5 1 1 2 1018500 1018500 0 8677 1225 8961 21483;21484 17249 17249 723 1 331100 0 LLNFPTIVER SVVVFDTAPTGHTLRLLNFPTIVERGLGRL GHTLRLLNFPTIVERGLGRLMQIKNQISPF R L L E R G 0 1 1 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 0 1 0 0 10 0 1200.6867 O43681 O43681 176 185 ASNA1 ATPase ASNA1 yes yes 2 0.0077735 106.2 By MS/MS 7.5 0.5 1 1 2 440250 440250 0 8678 226 8962 21485;21486 17250 17250 1 6651.5 0 LLNGPGDVETGTSITVPQKK QAELKKKDEEFQRTKLLNGPGDVETGTSIT GDVETGTSITVPQKKWLHFISPIFVQALTL K L L K K W 0 0 1 1 0 1 1 3 0 1 2 2 0 0 2 1 3 0 0 2 0 0 20 1 2053.1055 Q9HC07 Q9HC07 209 228 TMEM165 Transmembrane protein 165 yes yes 3 0.040644 59.502 By MS/MS 1.5 0.5 1 1 2 913090 913090 0 8679 2508 8963 21487;21488 17251 17251 1 268760 0 LLNLEGFPSGSQSR VHNITKLIKMSETHKLLNLEGFPSGSQSRL KLLNLEGFPSGSQSRLSGTLKSQARRTRGT K L L S R L 0 1 1 0 0 1 1 2 0 0 3 0 0 1 1 3 0 0 0 0 0 0 14 0 1503.7682 Q8IYB8 Q8IYB8 685 698 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00043306 142.76 By MS/MS 5 0 1 1 453600 453600 0 8680 1885 8964 21489 17252 17252 1 4549.4 0 LLNLLCR FLLGNVYEAFEHWKRLLNLLCRSEAAMMKH EAFEHWKRLLNLLCRSEAAMMKHHTLYINL R L L C R S 0 1 1 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 900.52151 Q9Y312 Q9Y312 277 283 AAR2 Protein AAR2 homolog yes yes 2 0.0078371 149.11 By MS/MS 7 0 1 1 466290 466290 0 8681 2853 8965 21490 17253 17253 1 7319.9 0 LLNPDDLREEIVK ASGEMTMDALLARLKLLNPDDLREEIVKAG LKLLNPDDLREEIVKAGLKCGPITSTTRFI K L L V K A 0 1 1 2 0 0 2 0 0 1 3 1 0 0 1 0 0 0 0 1 0 0 13 1 1552.8461 Q86XL3 Q86XL3 74 86 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.028027 71.241 By MS/MS 4 0 1 1 1335900 1335900 0 8682 1845 8966 21491 17254 17254 1 125720 0 LLNTFLER QSIYGGRVDNEFDQRLLNTFLERLFTTRSF DNEFDQRLLNTFLERLFTTRSFDSEFKLAC R L L E R L 0 1 1 0 0 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 8 0 1004.5655 Q14204 Q14204 4264 4271 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.5522E-06 190.73 By MS/MS 3 1.41 1 1 1 1 1 5 6042800 6042800 0 8683 1433 8967 21492;21493;21494;21495;21496 17255;17256;17257;17258 17255 4 1201600 0 LLNTHHR AKTGAELVTCGSVLKLLNTHHRVRLHSHDI VTCGSVLKLLNTHHRVRLHSHDIKYGSGSG K L L H R V 0 1 1 0 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 889.48823 Q9HCN8 Q9HCN8 44 50 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.012522 128.86 By MS/MS 8.5 0.5 1 1 2 1821900 1821900 0 8684 2516 8968 21497;21498 17259 17259 1 31387 0 LLPAEVDAAVIK TYHLTLGLLGQLIIRLLPAEVDAAVIKVLS IIRLLPAEVDAAVIKVLSAKHNLFAAGDSS R L L I K V 3 0 0 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 2 0 0 12 0 1237.7282 O43149 O43149 2147 2158 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.031481 79.148 By MS/MS 2.5 1.12 1 1 1 1 4 520670 520670 0 8685 191 8969 21499;21500;21501;21502 17260 17260 1 98327 0 LLPDTINSINLDR KFSELVMKCLWRMVRLLPDTINSINLDRIL VRLLPDTINSINLDRILLDIHIFMKVFPKE R L L D R I 0 1 2 2 0 0 0 0 0 2 3 0 0 0 1 1 1 0 0 0 0 0 13 0 1482.8042 Q14008 Q14008 1719 1731 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0010844 124.6 By MS/MS 2 0 1 1 1343200 1343200 0 8686 1417 8970 21503 17261 17261 1 454340 0 LLPEYPGVLSDVQEEK ESDTFFPEIDLEKYKLLPEYPGVLSDVQEE LPEYPGVLSDVQEEKGIKYKFEVYEKND__ K L L E K G 0 0 0 1 0 1 3 1 0 0 3 1 0 0 2 1 0 0 1 2 0 0 16 0 1814.9302 P00374 P00374 159 174 DHFR Dihydrofolate reductase yes yes 2 0.00035708 145.81 By MS/MS 9 0 1 1 510460 510460 0 8687 442 8971 21504 17262 17262 1 10046 0 LLPQGLAVYASPENK RGDLVSVKKSLGRNRLLPQGLAVYASPENK LLPQGLAVYASPENKKLFEEEKLLRQEGKL R L L N K K 2 0 1 0 0 1 1 1 0 0 3 1 0 0 2 1 0 0 1 1 0 0 15 0 1598.8668 Q9BYD2 Q9BYD2 123 137 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.00048946 163.99 By MS/MS 8 0 1 1 2094400 2094400 0 8688 2369 8972 21505 17263 17263 1 26442 0 LLPVLLSTAQEADPEVR TIQGLGAASAQFVSRLLPVLLSTAQEADPE PVLLSTAQEADPEVRSNAIFGMGVLAEHGG R L L V R S 2 1 0 1 0 1 2 0 0 0 4 0 0 0 2 1 1 0 0 2 0 0 17 0 1850.0149 Q8TEX9 Q8TEX9 900 916 IPO4 Importin-4 yes yes 2 4.8456E-07 213.67 By MS/MS 4.5 1.12 1 1 1 1 4 1703900 1703900 0 8689 2005 8973 21506;21507;21508;21509 17264;17265;17266;17267 17265 4 73487 0 LLQAAAGASAR HLCEPDMKLVWPSAKLLQAAAGASARACDS PSAKLLQAAAGASARACDSVTSNVLPLLLE K L L A R A 5 1 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1027.5774 Q96T76 Q96T76 374 384 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 2.5777E-05 158.47 By MS/MS By matching 4 0 2 1 1 2903200 2883600 19580 8690 2240 8974 21510;21511 17268 17268 1 271370 41718 LLQAFLER PVLWERTGNIPALVRLLQAFLERGSNTIAS NIPALVRLLQAFLERGSNTIASAAADKIPG R L L E R G 1 1 0 0 0 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 988.57057 P55060 P55060 707 714 CSE1L Exportin-2 yes yes 2 0.0054619 121.05 By MS/MS 4.5 0.5 1 1 2 7771000 7771000 0 8691 1053 8975 21512;21513 17269;17270 17269 2 662940 0 LLQDANYNVEK QAGYVGEDIESVIAKLLQDANYNVEKAQQG VIAKLLQDANYNVEKAQQGIVFLDEVDKIG K L L E K A 1 0 2 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1305.6565 O76031 O76031 339 349 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 1.2564E-06 206.49 By MS/MS 5 0 1 1 6875800 6875800 0 8692 360 8976 21514 17271 17271 1 68961 0 LLQDFFNGK IVLVGGSTRIPKIQKLLQDFFNGKELNKSI IPKIQKLLQDFFNGKELNKSINPDEAVAYG K L L G K E 0 0 1 1 0 1 0 1 0 0 2 1 0 2 0 0 0 0 0 0 0 0 9 0 1080.5604 P11142;P54652;P17066 P11142 349 357 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 0.00050043 146.69 By MS/MS 6 0.816 1 1 1 3 23754000 23754000 0 8693 572;639 8977 21515;21516;21517 17272;17273 17272 2 236110 0 LLQDFFNGKELNK IVLVGGSTRIPKIQKLLQDFFNGKELNKSI QKLLQDFFNGKELNKSINPDEAVAYGAAVQ K L L N K S 0 0 2 1 0 1 1 1 0 0 3 2 0 2 0 0 0 0 0 0 0 0 13 1 1564.8249 P11142;P54652;P17066 P11142 349 361 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 3.0533E-16 254.07 By MS/MS 6 0.816 1 1 1 3 5678200 5678200 0 8694 572;639 8978 21518;21519;21520 17274 17274 1 54349 0 LLQDFFNGR LVLVGGSTRIPKVQKLLQDFFNGRDLNKSI IPKVQKLLQDFFNGRDLNKSINPDEAVAYG K L L G R D 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 P0DMV9;P0DMV8 P0DMV9 349 357 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.002123 119.75 By MS/MS 6 0.816 1 1 1 3 16232000 16232000 0 8695 550 8979 21521;21522;21523 17275;17276;17277 17276 3 161870 0 LLQDFFNGRDLNK LVLVGGSTRIPKVQKLLQDFFNGRDLNKSI QKLLQDFFNGRDLNKSINPDEAVAYGAAVQ K L L N K S 0 1 2 2 0 1 0 1 0 0 3 1 0 2 0 0 0 0 0 0 0 0 13 1 1578.8154 P0DMV9;P0DMV8 P0DMV9 349 361 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.00011592 186.74 By MS/MS 5 0 1 1 785350 785350 0 8696 550 8980 21524 17278 17278 1 7876.7 0 LLQDFNR DKFKTLSEKNNITQKLLQDFNRFLNTTFSF EKNNITQKLLQDFNRFLNTTFSFFPPFVSC K L L N R F 0 1 1 1 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 904.47667 P78527 P78527 2836 2842 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.026183 107.59 By MS/MS 2 0.816 1 1 1 3 5468300 5468300 0 8697 1225 8981 21525;21526;21527 17279;17280 17280 2 1193800 0 LLQDYGLVVR TILKVGVGCSEDASKLLQDYGLVVRGCLDL EDASKLLQDYGLVVRGCLDLRYLAMRQRNN K L L V R G 0 1 0 1 0 1 0 1 0 0 3 0 0 0 0 0 0 0 1 2 0 0 10 0 1174.671 Q9NVH0 Q9NVH0 175 184 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 0.010797 92.538 By MS/MS 5 0 1 1 754990 754990 0 8698 2594 8982 21528 17281 17281 1 7572.2 0 LLQEAEQR SRQGKEGSMIDANLKLLQEAEQRLKAIVAE MIDANLKLLQEAEQRLKAIVAEKFAIATKE K L L Q R L 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 985.51926 Q9H9E3 Q9H9E3 187 194 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.014628 116.05 By MS/MS 4 0 1 1 0 0 0 8699 2486 8983 21529 17282 17282 1 0 0 LLQEAPGK TRQAPESPWEEQLARLLQEAPGKLSLDVEQ WEEQLARLLQEAPGKLSLDVEQAPSGQHSQ R L L G K L 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 8 0 854.48617 O00411 O00411 194 201 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.021993 97.431 By MS/MS 3.5 0.5 1 1 2 2207500 2207500 0 8700 104 8984 21530;21531 17283 17283 1 56223 0 LLQEEEQER SLSPSRCSEPPPVARLLQEEEQERRRPQSR PPPVARLLQEEEQERRRPQSRSQSFFAAAR R L L E R R 0 1 0 0 0 2 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1172.5673 O14654 O14654 1074 1082 IRS4 Insulin receptor substrate 4 yes yes 2 7.9283E-05 166.07 By MS/MS 3.5 1.12 1 1 1 1 4 1417300 1417300 0 8701 129 8985 21532;21533;21534;21535 17284;17285;17286 17285 3 105920 0 LLQEIVDQCMNR LQLEESTGSREQDVRLLQEIVDQCMNRSIA DVRLLQEIVDQCMNRSIALTQARYLEKEEK R L L N R S 0 1 1 1 1 2 1 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 12 0 1517.733 O15269 O15269 411 422 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.00075207 164.48 By MS/MS 6 0 1 1 0 0 0 8702 177 8986 21536 17287 17287 1 0 0 LLQFQDLTGIESMDQCR AAPEERDLTQEQTEKLLQFQDLTGIESMDQ QFQDLTGIESMDQCRHTLEQHNWNIEAAVQ K L L C R H 0 1 0 2 1 3 1 1 0 1 3 0 1 1 0 1 1 0 0 0 0 0 17 0 2052.9609 Q96CS3 Q96CS3 17 33 FAF2 FAS-associated factor 2 yes yes 2;3 3.4453E-33 293.8 By MS/MS 6.33 0.471 2 1 3 3243000 3243000 0 8703 2126 8987 21537;21538;21539 17288;17289 17289 1017 2 23191 0 LLQFVTGTCR FWQVVKEMDNEKRIRLLQFVTGTCRLPVGG EKRIRLLQFVTGTCRLPVGGFAELIGSNGP R L L C R L 0 1 0 0 1 1 0 1 0 0 2 0 0 1 0 0 2 0 0 1 0 0 10 0 1193.6227 O00308;Q96J02;Q9H0M0 O00308 794 803 WWP2;ITCH;WWP1 NEDD4-like E3 ubiquitin-protein ligase WWP2;E3 ubiquitin-protein ligase Itchy homolog;NEDD4-like E3 ubiquitin-protein ligase WWP1 yes no 2 0.0059061 103.55 By MS/MS 4 0 1 1 506150 506150 0 8704 100 8988 21540 17290 17290 1 47632 0 LLQFYAETCPAPER ISGESGAGKTEATKRLLQFYAETCPAPERG RLLQFYAETCPAPERGGAVRDRLLQSNPVL R L L E R G 2 1 0 0 1 1 2 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 14 0 1693.8134 O00159 O00159 153 166 MYO1C Unconventional myosin-Ic yes yes 2 0.00012513 198.74 By MS/MS 4 0 1 1 3486300 3486300 0 8705 85 8989 21541 17291 17291 1 328090 0 LLQHGINADDKR YGQYEGKVSSVALCKLLQHGINADDKRLQD LCKLLQHGINADDKRLQDIRVKGEEIYSMD K L L K R L 1 1 1 2 0 1 0 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1378.7317 Q96P70 Q96P70 866 877 IPO9 Importin-9 yes yes 3 0.022896 112.94 By MS/MS 3.5 0.5 1 1 2 1255100 1255100 0 8706 2208 8990 21542;21543 17292 17292 1 54699 0 LLQIIER ALKLNSNEARLKFPRLLQIIERYPEETLSL EARLKFPRLLQIIERYPEETLSLMTKEISS R L L E R Y 0 1 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 7 0 883.5491 P78527 P78527 3468 3474 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.040933 96.492 By MS/MS 1.5 0.5 1 1 2 1091100 1091100 0 8707 1225 8991 21544;21545 17293;17294 17294 2 313250 0 LLQISSFNGK TVKNLEIFRLKMILRLLQISSFNGKMNALN KMILRLLQISSFNGKMNALNEVNKVISSVS R L L G K M 0 0 1 0 0 1 0 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1105.6132 Q93008;O00507 Q93008 342 351 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.030959 81.525 By MS/MS 3.5 1.12 1 1 1 1 4 1046600 1046600 0 8708 2085 8992 21546;21547;21548;21549 17295 17295 1 201880 0 LLQLLGR RLPVRAWADVRRESRLLQLLGRLPLFGLGR ADVRRESRLLQLLGRLPLFGLGRLVTRKSW R L L G R L 0 1 0 0 0 1 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 811.52797 P82930 P82930 64 70 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.021288 111.28 By MS/MS 8.5 0.5 1 1 2 4332100 4332100 0 8709 1237 8993 21550;21551 17296 17296 1 55831 0 LLQLQEQMR EMRQMGQPCDAYQKRLLQLQEQMRALYKAI DAYQKRLLQLQEQMRALYKAISVPRVRRAS R L L M R A 0 1 0 0 0 3 1 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 9 0 1157.6227 P15924 P15924 142 150 DSP Desmoplakin yes yes 2 0.00040186 149.72 By MS/MS By MS/MS 3.67 2.05 2 2 1 1 3 3 2809600 1607600 1202000 8710 628 8994;8995 21552;21553;21554;21555;21556;21557 17297;17298;17299;17300;17301 17298 302 5 334230 153000 LLQLVEDR LISVLREANQAINPKLLQLVEDRGSGRSRG NQAINPKLLQLVEDRGSGRSRGRGGMKDDR K L L D R G 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 984.5604 P17844 P17844 471 478 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.01275 107.69 By MS/MS 4.5 0.5 1 1 2 6923400 6923400 0 8711 646 8996 21558;21559 17302 17302 1 87330 0 LLQQEEEIK ______________________________ SECSARLLQQEEEIKSLTAEIDRLKNCGCL R L L I K S 0 0 0 0 0 2 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1128.6027 P54136 P54136 12 20 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 6.7675E-05 168.26 By MS/MS By MS/MS 5 0 2 1 1 9687000 9565400 121580 8712 1043 8997 21560;21561 17303;17304 17304 2 95936 102100 LLQQGTAPAQAK AFVKALQQEQEIEQRLLQQGTAPAQAKAEP EQRLLQQGTAPAQAKAEPTAAPHPVLKQVI R L L A K A 3 0 0 0 0 3 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 12 0 1224.6826 Q86YP4 Q86YP4 476 487 GATAD2A Transcriptional repressor p66-alpha yes yes 2 1.4154E-06 202.96 By MS/MS By MS/MS 5 0 2 1 1 1890900 1869200 21684 8713 1853 8998 21562;21563 17305;17306;17307 17307 3 18747 18210 LLQSGNSDVVR QLIGLKEKGLPQIARLLQSGNSDVVRSGAS QIARLLQSGNSDVVRSGASLLSNMSRHPLL R L L V R S 0 1 1 1 0 1 0 1 0 0 2 0 0 0 0 2 0 0 0 2 0 0 11 0 1186.6306 Q13835 Q13835 603 613 PKP1 Plakophilin-1 yes yes 2 0.00078366 142.98 By MS/MS 5 3.12 1 1 1 1 1 1 1 7 1549200 0 1549200 8714 1410 8999 21564;21565;21566;21567;21568;21569;21570 17308;17309;17310;17311;17312;17313;17314 17309 7 0 1464900 LLQSNPVLEAFGNAK ETCPAPERGGAVRDRLLQSNPVLEAFGNAK LLQSNPVLEAFGNAKTLRNDNSSRFGKYMD R L L A K T 2 0 2 0 0 1 1 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 15 0 1599.8621 O00159 O00159 174 188 MYO1C Unconventional myosin-Ic yes yes 2 0.00013424 179.59 By MS/MS 4 0 1 1 1588700 1588700 0 8715 85 9000 21571 17315;17316 17315 2 149500 0 LLQSPCPFCDSPVF IARHPAPEDPDWIKRLLQSPCPFCDSPVF_ RLLQSPCPFCDSPVF_______________ R L L V F - 0 0 0 1 2 1 0 0 0 0 2 0 0 2 3 2 0 0 0 1 0 0 14 0 1665.7531 Q9UKN8 Q9UKN8 809 822 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 0.00045656 160.36 By MS/MS 4.5 0.5 1 1 2 514670 514670 0 8716 2762 9001 21572;21573 17317;17318;17319 17318 3 45493 0 LLQTDDEEEAGLLELLK TWMNNFHTLLTLDNKLLQTDDEEEAGLLEL QTDDEEEAGLLELLKSQICDNAALYAQKYD K L L L K S 1 0 0 2 0 1 4 1 0 0 6 1 0 0 0 0 1 0 0 0 0 0 17 0 1927.999 P55060 P55060 252 268 CSE1L Exportin-2 yes yes 2 1.3544E-33 307.43 By MS/MS 5.25 0.829 1 1 2 4 967220 967220 0 8717 1053 9002 21574;21575;21576;21577 17320;17321;17322 17320 3 78338 0 LLQVDPEAR EWDDRSSTVKDLISRLLQVDPEARLTAEQA KDLISRLLQVDPEARLTAEQALQHPFFERC R L L A R L 1 1 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 9 0 1039.5662 P15735 P15735 271 279 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 2 0.040101 80.231 By MS/MS 7 0 1 1 2748000 2748000 0 8718 626 9003 21578 17323 17323 1 43139 0 LLQVGEEGPQAVAK TNLAPSLQLCQLGVKLLQVGEEGPQAVAKL KLLQVGEEGPQAVAKLLIKASAVLSKSMEA K L L A K L 2 0 0 0 0 2 2 2 0 0 2 1 0 0 1 0 0 0 0 2 0 0 14 0 1437.7827 Q14674 Q14674 300 313 ESPL1 Separin yes yes 2 0.02466 90.614 By MS/MS 3 0 1 1 531780 531780 0 8719 1449 9004 21579 17324 17324 1 9730.1 0 LLRDAQQNS IEEFKERLRKRREEKLLRDAQQNS______ KRREEKLLRDAQQNS_______________ K L L N S - 1 1 1 1 0 2 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 1 1043.536 P0DJ07 P0DJ07 65 73 PET100 Protein PET100 homolog, mitochondrial yes yes 2 0.00033421 168.27 By MS/MS 9 0.816 1 1 1 3 9631300 9631300 0 8720 548 9005 21580;21581;21582 17325 17325 1 142920 0 LLRDYQELMNTK DLEDALQQAKEDLARLLRDYQELMNTKLAL LARLLRDYQELMNTKLALDLEIATYRTLLE R L L T K L 0 1 1 1 0 1 1 0 0 0 3 1 1 0 0 0 1 0 1 0 0 0 12 1 1522.7814 CON__P04264;P04264;CON__Q3TTY5;CON__ENSEMBL:ENSBTAP00000038253 P04264 461 472 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.00012186 171.67 By MS/MS By MS/MS 4.29 2.63 4 4 6 2 4 3 1 1 1 2 15 13 68702000 43213000 25489000 + 8721 471;45;65;34 9006;9007 21583;21584;21585;21586;21587;21588;21589;21590;21591;21592;21593;21594;21595;21596;21597;21598;21599;21600;21601;21602;21603;21604;21605;21606;21607;21608;21609;21610 17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344;17345;17346;17347;17348 17343 12 23 3106500 8180700 LLRDYQELMNVK DLEEALQQAKEDLARLLRDYQELMNVKLAL LARLLRDYQELMNVKLALDVEIATYRKLLE R L L V K L 0 1 1 1 0 1 1 0 0 0 3 1 1 0 0 0 0 0 1 1 0 0 12 1 1520.8021 CON__P35908v2;CON__P35908;P35908;CON__P12035;P12035;CON__Q5XKE5;Q5XKE5 CON__P35908v2 459 470 KRT2;KRT3;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79 no no 2;3 0.00024363 139.76 By MS/MS By MS/MS 4.41 2.55 2 2 3 2 4 2 2 9 8 22728000 13012000 9716700 + 8722 55;48;68 9008;9009 21611;21612;21613;21614;21615;21616;21617;21618;21619;21620;21621;21622;21623;21624;21625;21626;21627 17349;17350;17351;17352;17353;17354;17355;17356;17357;17358;17359;17360 17359 34 12 889770 1938600 LLREAEESSK SLLNGTFDFQNDFLRLLREAEESSKIRAPT NDFLRLLREAEESSKIRAPTTMKKFEDSEK R L L S K I 1 1 0 0 0 0 3 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 1 1160.6037 P08240 P08240 120 129 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0014986 140.11 By MS/MS 5 0 1 1 1118500 1118500 0 8723 522 9010 21628 17361 17361 1 11218 0 LLREYQELMNTK ELEEALQKAKQDMARLLREYQELMNTKLAL MARLLREYQELMNTKLALDVEIATYRKLLE R L L T K L 0 1 1 0 0 1 2 0 0 0 3 1 1 0 0 0 1 0 1 0 0 0 12 1 1536.797 CON__P13647;P13647;CON__Q922U2 CON__P13647 449 460 KRT5 Keratin, type II cytoskeletal 5 no no 3 0.0073964 91.202 By MS/MS By MS/MS 3.33 0.471 2 1 1 2 3390500 2354700 1035800 + 8724 52;74 9011;9012 21629;21630;21631 17362;17363;17364;17365 17364 39 4 221590 131840 LLRIDELQVVK SGPDADPSSLLQDCRLLRIDELQVVKTGGT QDCRLLRIDELQVVKTGGTPKVPDCFQRTP R L L V K T 0 1 0 1 0 1 1 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 11 1 1324.8078 O95071 O95071 710 720 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 6.9959E-06 172.21 By MS/MS 1.5 0.5 1 1 2 368130 368130 0 8725 384 9013 21632;21633 17366;17367 17367 2 111010 0 LLSAACR GAQIPRDPSQQELPRLLSAACRLQLNGNLQ PSQQELPRLLSAACRLQLNGNLQLELAQVL R L L C R L 2 1 0 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 789.41671 P49327 P49327 1181 1187 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.016101 119.56 By MS/MS 2.5 1.12 1 1 1 1 4 10177000 10177000 0 8726 946 9014 21634;21635;21636;21637 17368 17368 1 2085200 0 LLSAGQLLFQGR ______________________________ LRRLLSAGQLLFQGRALLVTNTLGCGALMA R L L G R A 1 1 0 0 0 2 0 2 0 0 4 0 0 1 0 1 0 0 0 0 0 0 12 0 1301.7456 Q567V2 Q567V2 12 23 MPV17L2 Mpv17-like protein 2 yes yes 2 4.5918E-06 188.99 By MS/MS 9 0 1 1 420260 420260 0 8727 1596 9015 21638 17369 17369 1 8270.9 0 LLSAYSAIDPR VDISLYNTLALHNTRLLSAYSAIDPRVKYL HNTRLLSAYSAIDPRVKYLCYTMKVFTKMC R L L P R V 2 1 0 1 0 0 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 0 11 0 1204.6452 Q5VYS8 Q5VYS8 1133 1143 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 0.00063292 128.91 By MS/MS 2 0 1 1 133950 133950 0 8728 1657 9016 21639 17370 17370 1 45309 0 LLSCSADGTLR TDAVWGLAYSAAHQRLLSCSADGTLRLWNT AHQRLLSCSADGTLRLWNTTEVAPALSVFN R L L L R L 1 1 0 1 1 0 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1191.5918 O43815 O43815 584 594 STRN Striatin yes yes 2 0.00010764 151.22 By MS/MS 4 0 1 1 2048100 2048100 0 8729 237 9017 21640 17371 17371 1 192740 0 LLSDFLDSEVSELR SKEVEETATAKNVLKLLSDFLDSEVSELRT KLLSDFLDSEVSELRTGAAEGLAKLMFSGL K L L L R T 0 1 0 2 0 0 2 0 0 0 4 0 0 1 0 3 0 0 0 1 0 0 14 0 1621.8199 Q9BPX3 Q9BPX3 695 708 NCAPG Condensin complex subunit 3 yes yes 2 5.6101E-05 164.48 By MS/MS 4 0 1 1 0 0 0 8730 2279 9018 21641 17372 17372 1 0 0 LLSDLSAFGGAAR ______________________________ LRLLSDLSAFGGAARLRELVAGDSAVRVRG R L L A R L 3 1 0 1 0 0 0 2 0 0 3 0 0 1 0 2 0 0 0 0 0 0 13 0 1276.6776 Q86YV9 Q86YV9 9 21 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 4.3611E-05 211.86 By MS/MS 5 0 1 1 1550300 1550300 0 8731 1856 9019 21642 17373;17374 17373 2 15549 0 LLSDPNYGVHLPAVK EGRLVHIIGALRTSKLLSDPNYGVHLPAVK LLSDPNYGVHLPAVKLRRHVEMYQWVETEE K L L V K L 1 0 1 1 0 0 0 1 1 0 3 1 0 0 2 1 0 0 1 2 0 0 15 0 1621.8828 Q9BTV4 Q9BTV4 100 114 TMEM43 Transmembrane protein 43 yes yes 3 0.033203 71.241 By MS/MS 7 0 1 1 1090900 1090900 0 8732 2318 9020 21643 17375;17376 17376 2 17126 0 LLSDSLPPSTGTFQEAQSR DVDNALRAVGDASKRLLSDSLPPSTGTFQE SLPPSTGTFQEAQSRLNEAAAGLNQAATEL R L L S R L 1 1 0 1 0 2 1 1 0 0 3 0 0 1 2 4 2 0 0 0 0 0 19 0 2033.0065 Q9Y490 Q9Y490 1223 1241 TLN1 Talin-1 yes yes 2 0.00074404 109.95 By MS/MS 2 0 1 1 272940 272940 0 8733 2888 9021 21644 17377 17377 1 92318 0 LLSEGADVNAK LLEAARANNMQEVSRLLSEGADVNAKHRLG EVSRLLSEGADVNAKHRLGWTALMVAAINR R L L A K H 2 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1115.5823 Q9H078 Q9H078 153 163 CLPB Caseinolytic peptidase B protein homolog yes yes 2 6.8478E-05 166.34 By MS/MS 8 1.63 1 1 1 3 913950 913950 0 8734 2402 9022 21645;21646;21647 17378;17379;17380 17378 3 20141 0 LLSFSPEEFPTLK GKPVGHEGGLRGSSRLLSFSPEEFPTLKAA SRLLSFSPEEFPTLKAAGGQDKAGKEKGVL R L L L K A 0 0 0 0 0 0 2 0 0 0 3 1 0 2 2 2 1 0 0 0 0 0 13 0 1506.797 Q5JSZ5 Q5JSZ5 164 176 PRRC2B Protein PRRC2B yes yes 2 0.00020781 168.83 By MS/MS 5 0.816 1 1 1 3 464310 464310 0 8735 1609 9023 21648;21649;21650 17381;17382;17383 17381 3 10159 0 LLSGPLDQVR SELHRAMNLHVGNLRLLSGPLDQVRAALPT VGNLRLLSGPLDQVRAALPTPALSPEDKAV R L L V R A 0 1 0 1 0 1 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1096.6241 Q9H3S7 Q9H3S7 528 537 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 2 0.049354 72.643 By MS/MS 2 0 1 1 177020 177020 0 8736 2441 9024 21651 17384 17384 1 59874 0 LLSIVNVCK KHALQRDIFTPNDERLLSIVNVCKAGKKKK TPNDERLLSIVNVCKAGKKKKNCFLCATVT R L L C K A 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 9 0 1044.6002 Q9NV70 Q9NV70 20 28 EXOC1 Exocyst complex component 1 yes yes 2 0.012679 95.741 By MS/MS 4 0 1 1 1222800 1222800 0 8737 2589 9025 21652 17385 17385 1 115070 0 LLSLLPLSCQK GRSLNPATIYPVLPKLLSLLPLSCQKRLHC VLPKLLSLLPLSCQKRLHCRSYGQDHLDTG K L L Q K R 0 0 0 0 1 1 0 0 0 0 5 1 0 0 1 2 0 0 0 0 0 0 11 0 1270.7319 Q9Y289 Q9Y289 569 579 SLC5A6 Sodium-dependent multivitamin transporter yes yes 2 0.0013548 114.51 By MS/MS 2 0 1 1 46488 46488 0 8738 2820 9026 21653 17386;17387 17387 2 15724 0 LLSMAYSAVGK NGLTKLINEYKEDPKLLSMAYSAVGKLSSR EDPKLLSMAYSAVGKLSSRMPHLFTKDIAL K L L G K L 2 0 0 0 0 0 0 1 0 0 2 1 1 0 0 2 0 0 1 1 0 0 11 0 1138.6056 Q5VYK3 Q5VYK3 415 425 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0017469 112.36 By MS/MS 2 0 1 1 649750 649750 0 8739 1656 9027 21654 17388 17388 899 1 219770 0 LLSMGQLDLLR MPHIEAQQRAVAINRLLSMGQLDLLRSNTG AINRLLSMGQLDLLRSNTGLLYRIKDSQNA R L L L R S 0 1 0 1 0 1 0 1 0 0 5 0 1 0 0 1 0 0 0 0 0 0 11 0 1257.7115 Q9H1D9 Q9H1D9 57 67 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 2 0.0021468 111.27 By MS/MS 8 0 1 1 313100 313100 0 8740 2421 9028 21655 17389 17389 1090 1 3952.8 0 LLSQCMEYFDLR PLWSPTSIMRGVNQRLLSQCMEYFDLRCQL NQRLLSQCMEYFDLRCQLLDDLTTSEMEQL R L L L R C 0 1 0 1 1 1 1 0 0 0 3 0 1 1 0 1 0 0 1 0 0 0 12 0 1573.7269 Q9UPU5 Q9UPU5 1504 1515 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.050624 73.435 By MS/MS 2 0 1 1 0 0 0 8741 2802 9029 21656 17390 17390 1171 1 0 0 LLSQPCASDR IADKEVTIKVPAGTRLLSQPCASDRFIQTL PAGTRLLSQPCASDRFIQTLSHKQLQAEMM R L L D R F 1 1 0 1 1 1 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1145.5499 A3KMH1 A3KMH1 411 420 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0011712 120.31 By MS/MS 2.5 0.5 1 1 2 607890 607890 0 8742 14 9030 21657;21658 17391 17391 1 164520 0 LLSRPQDALEGVVLSPSLEAR TVLEALRHPIQVSRRLLSRPQDALEGVVLS DALEGVVLSPSLEARVRDIAIATRNTKKNR R L L A R V 2 2 0 1 0 1 2 1 0 0 5 0 0 0 2 3 0 0 0 2 0 0 21 1 2249.2379 Q9NVI7 Q9NVI7 355 375 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 3 1.0973E-05 125.51 By MS/MS 5.5 0.5 1 1 2 2603100 2603100 0 8743 2598 9031 21659;21660 17392;17393 17392 2 19780 0 LLSTDPVAAK SDNPDLRDRGYIYWRLLSTDPVAAKEVVLA YIYWRLLSTDPVAAKEVVLAEKPLISEETD R L L A K E 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 10 0 1013.5757 Q10567 Q10567 529 538 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.0083523 104.2 By MS/MS By matching 4 0 2 1 1 2545900 2508600 37267 8744 1322 9032 21661;21662 17394 17394 1 236080 79404 LLSTSPALQGTPASR LLAANVATLGLLMARLLSTSPALQGTPASR LLSTSPALQGTPASRGFFAAAILFLSQSHV R L L S R G 2 1 0 0 0 1 0 1 0 0 3 0 0 0 2 3 2 0 0 0 0 0 15 0 1497.8151 Q9UBB6 Q9UBB6 579 593 NCDN Neurochondrin yes yes 2 4.7194E-07 207.47 By MS/MS 5 0 1 1 4936100 4936100 0 8745 2694 9033 21663 17395 17395 1 49507 0 LLSTYICK TSSSATSYSSEFSKRLLSTYICKVLGNLQL SSEFSKRLLSTYICKVLGNLQLNLLSKSKV R L L C K V 0 0 0 0 1 0 0 0 0 1 2 1 0 0 0 1 1 0 1 0 0 0 8 0 996.5314 Q9UPT5 Q9UPT5 544 551 EXOC7 Exocyst complex component 7 yes yes 2 0.038568 86.833 By MS/MS 5 0 1 1 729160 729160 0 8746 2801 9034 21664 17396 17396 1 7313.1 0 LLSVEGSTLR NAQVTTENQLKYLTRLLSVEGSTLREALTH KYLTRLLSVEGSTLREALTHRKIIAKGEEL R L L L R E 0 1 0 0 0 0 1 1 0 0 3 0 0 0 0 2 1 0 0 1 0 0 10 0 1073.6081 O00159 O00159 341 350 MYO1C Unconventional myosin-Ic yes yes 2 0.0001275 152.06 By MS/MS 3.5 0.5 1 1 2 6431700 6431700 0 8747 85 9035 21665;21666 17397 17397 1 594980 0 LLSVNIR DKEALIAKCNDYRRRLLSVNIRVRADLRDN KCNDYRRRLLSVNIRVRADLRDNYSPGWKF R L L I R V 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 813.50724 P07814 P07814 1334 1340 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.012522 128.86 By MS/MS 3 0.816 1 1 1 3 4278700 4278700 0 8748 512 9036 21667;21668;21669 17398 17398 1 189240 0 LLTATNLVTLPNSR LIAGQKSARLDLLYRLLTATNLVTLPNSRG RLLTATNLVTLPNSRGEHLLLFLVQTVARQ R L L S R G 1 1 2 0 0 0 0 0 0 0 4 0 0 0 1 1 3 0 0 1 0 0 14 0 1511.8671 O95071 O95071 1258 1271 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 5.9573E-11 228.78 By MS/MS 1.5 0.5 1 1 2 719950 719950 0 8749 384 9037 21670;21671 17399;17400 17400 2 235150 0 LLTDCNTETFQK APHEPLVVFVDNYIKLLTDCNTETFQKILD YIKLLTDCNTETFQKILDMKGLKRSEQSSM K L L Q K I 0 0 1 1 1 1 1 0 0 0 2 1 0 1 0 0 3 0 0 0 0 0 12 0 1468.6868 Q5VIR6 Q5VIR6 760 771 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 8.0092E-25 275.11 By MS/MS 4 0 1 1 1482900 1482900 0 8750 1644 9038 21672 17401 17401 1 139550 0 LLTEEGQK PETAVKFWAYEQYKKLLTEEGQKIGTFERF AYEQYKKLLTEEGQKIGTFERFISGSMAGA K L L Q K I 0 0 0 0 0 1 2 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 916.48656 Q6NUK1 Q6NUK1 278 285 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.0075464 113.7 By MS/MS 7 0 1 1 4488700 4488700 0 8751 1687 9039 21673 17402 17402 1 70465 0 LLTEEGQKIGTFER PETAVKFWAYEQYKKLLTEEGQKIGTFERF KLLTEEGQKIGTFERFISGSMAGATAQTFI K L L E R F 0 1 0 0 0 1 3 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 14 1 1619.8519 Q6NUK1 Q6NUK1 278 291 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 2.1155E-06 204.32 By MS/MS 7 0 1 1 1425000 1425000 0 8752 1687 9040 21674 17403 17403 1 22369 0 LLTFMGMAVENK DSLGLLHEQNMAKMRLLTFMGMAVENKEIS KMRLLTFMGMAVENKEISFDTMQQELQIGA R L L N K E 1 0 1 0 0 0 1 1 0 0 2 1 2 1 0 0 1 0 0 1 0 0 12 0 1352.6832 Q7L2H7 Q7L2H7 279 290 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 2.3133E-18 265.67 By MS/MS By matching 7.17 0.373 5 1 5 1 7302700 7251600 51087 8753 1762 9041;9042;9043 21675;21676;21677;21678;21679;21680 17404;17405;17406;17407 17406 930;931 4 113700 92007 LLTFNPTYCALK LLKLCQPFCKPRSSRLLTFNPTYCALKELN SSRLLTFNPTYCALKELNDEERKIKNVHMR R L L L K E 1 0 1 0 1 0 0 0 0 0 3 1 0 1 1 0 2 0 1 0 0 0 12 0 1439.7483 Q14139 Q14139 457 468 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.011866 99.013 By MS/MS 4 0 1 1 300650 300650 0 8754 1421 9044 21681 17408 17408 0 28293 0 LLTGELLPTDGMIR ALVGPNGAGKSTLLKLLTGELLPTDGMIRK KLLTGELLPTDGMIRKHSHVKIGRYHQHLQ K L L I R K 0 1 0 1 0 0 1 2 0 1 4 0 1 0 1 0 2 0 0 0 0 0 14 0 1527.8331 Q9UG63 Q9UG63 442 455 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.00046883 156.01 By MS/MS 5 0 1 1 1088400 1088400 0 8755 2719 9045 21682 17409 17409 1152 1 10916 0 LLTGLYR LVGLCDSGKTLLFVRLLTGLYRDTQTSITD GKTLLFVRLLTGLYRDTQTSITDSCAVYRV R L L Y R D 0 1 0 0 0 0 0 1 0 0 3 0 0 0 0 0 1 0 1 0 0 0 7 0 834.49634 Q9Y5M8 Q9Y5M8 84 90 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.012706 128.38 By MS/MS 8.5 0.5 1 1 2 8622600 8622600 0 8756 2917 9046 21683;21684 17410 17410 1 110760 0 LLTHHKDHFTK RQDLMNIAGTTLSSKLLTHHKDHFTKLAVE LSSKLLTHHKDHFTKLAVEAVLRLKGSGNL K L L T K L 0 0 0 1 0 0 0 0 3 0 2 2 0 1 0 0 2 0 0 0 0 0 11 1 1375.7361 P78371 P78371 171 181 CCT2 T-complex protein 1 subunit beta yes yes 2;3 4.9225E-05 173.24 By MS/MS 6.33 0.471 2 1 3 4643700 4643700 0 8757 1222 9047 21685;21686;21687 17411;17412 17412 2 33200 0 LLTLPNGER PEWVENLNSVLDDNKLLTLPNGERLSLPPN VLDDNKLLTLPNGERLSLPPNVRIMFEVQD K L L E R L 0 1 1 0 0 0 1 1 0 0 3 0 0 0 1 0 1 0 0 0 0 0 9 0 1011.5713 Q14204 Q14204 2324 2332 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.037059 81.548 By MS/MS 1.5 0.5 1 1 2 777550 777550 0 8758 1433 9048 21688;21689 17413 17413 1 211820 0 LLTNFLPLK ENDRILVAQGGLGGKLLTNFLPLKGQKRII GGLGGKLLTNFLPLKGQKRIIHLDLKLIAD K L L L K G 0 0 1 0 0 0 0 0 0 0 4 1 0 1 1 0 1 0 0 0 0 0 9 0 1057.6536 A4D1E9 A4D1E9 127 135 GTPBP10 GTP-binding protein 10 yes yes 2 0.00096326 134.48 By MS/MS 7 0 1 1 138400 138400 0 8759 15 9049 21690 17414 17414 1 2172.6 0 LLTPAEEVLTEEER AAGLCQLGFCPTKRKLLTPAEEVLTEEERT KLLTPAEEVLTEEERTLSRGALRDMLDQVY K L L E R T 1 1 0 0 0 0 5 0 0 0 3 0 0 0 1 0 2 0 0 1 0 0 14 0 1627.8305 Q9C0B7 Q9C0B7 239 252 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 2 0.0038047 108.56 By MS/MS 3 0 1 1 110550 110550 0 8760 2389 9050 21691 17415 17415 1 2022.8 0 LLTQDEGPALVPGGR AILIRDPRTARMGWRLLTQDEGPALVPGGR LLTQDEGPALVPGGRLGDLWDYHQHRYLQG R L L G R L 1 1 0 1 0 1 1 3 0 0 3 0 0 0 2 0 1 0 0 1 0 0 15 0 1521.8151 Q5T440 Q5T440 198 212 IBA57 Putative transferase CAF17, mitochondrial yes yes 2 0.00050231 132.86 By MS/MS 7.5 0.5 1 1 2 1964500 1964500 0 8761 1630 9051 21692;21693 17416 17416 1 26515 0 LLTSCYVGPTR GPTVASRHVARNLLRLLTSCYVGPTRQQFT NLLRLLTSCYVGPTRQQFTVSSGESPPLSA R L L T R Q 0 1 0 0 1 0 0 1 0 0 2 0 0 0 1 1 2 0 1 1 0 0 11 0 1265.6438 Q562E7 Q562E7 1252 1262 WDR81 WD repeat-containing protein 81 yes yes 2 0.00010764 151.22 By MS/MS 2 0 1 1 489920 489920 0 8762 1593 9052 21694 17417 17417 1 165710 0 LLTSFTSQAVDR RELEAMRQRLLSAARLLTSFTSQAVDRTVN AARLLTSFTSQAVDRTVNDWTSSNEKAVMS R L L D R T 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 2 2 0 0 1 0 0 12 0 1336.6987 O95613 O95613 2988 2999 PCNT Pericentrin yes yes 2 0.0066473 98.754 By MS/MS 1 0 1 1 86238 86238 0 8763 419 9053 21695 17418 17418 1 20781 0 LLTSQCGAAEEEFVQR LSDLDYMQFIRLLEKLLTSQCGAAEEEFVQ LTSQCGAAEEEFVQRFRRSVTLESKKQLIE K L L Q R F 2 1 0 0 1 2 3 1 0 0 2 0 0 1 0 1 1 0 0 1 0 0 16 0 1836.8676 P82933 P82933 228 243 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 6.2814E-33 297.91 By MS/MS By matching 7.25 0.433 3 1 3 1 19237000 19202000 34766 8764 1239 9054 21696;21697;21698;21699 17419;17420;17421 17419 3 295780 62612 LLTSYGFIQCSER NGTSAALRETGVIEKLLTSYGFIQCSERQA EKLLTSYGFIQCSERQARLFFHCSQYNGNL K L L E R Q 0 1 0 0 1 1 1 1 0 1 2 0 0 1 0 2 1 0 1 0 0 0 13 0 1572.7606 O75534 O75534 33 45 CSDE1 Cold shock domain-containing protein E1 yes yes 2 6.1792E-17 254.07 By MS/MS 6 1.41 1 1 1 1 1 5 10145000 10145000 0 8765 333 9055 21700;21701;21702;21703;21704 17422;17423 17422 2 748160 0 LLTTIGK LLKNHDEESLECLCRLLTTIGKDLDFEKAK ESLECLCRLLTTIGKDLDFEKAKPRMDQYF R L L G K D 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 0 2 0 0 0 0 0 7 0 744.47454 Q04637;O43432 Q04637 938 944 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.022174 110.61 By MS/MS 3 1.41 1 1 1 1 1 5 12725000 12725000 0 8766 1291;210 9056 21705;21706;21707;21708;21709 17424;17425;17426 17425 3 3535400 0 LLTTIGKDLDFEK LLKNHDEESLECLCRLLTTIGKDLDFEKAK CRLLTTIGKDLDFEKAKPRMDQYFNQMEKI R L L E K A 0 0 0 2 0 0 1 1 0 1 3 2 0 1 0 0 2 0 0 0 0 0 13 1 1491.8185 Q04637;O43432 Q04637 938 950 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 0.0014505 151.1 By MS/MS 2 0 2 2 3303500 3303500 0 8767 1291;210 9057 21710;21711 17427;17428 17428 2 1117400 0 LLTWVIGTGSPR DENGPELLPRVAMLRLLTWVIGTGSPRLQV MLRLLTWVIGTGSPRLQVLASDTLTTLCAS R L L P R L 0 1 0 0 0 0 0 2 0 1 2 0 0 0 1 1 2 1 0 1 0 0 12 0 1298.7347 Q92616 Q92616 1043 1054 GCN1L1 Translational activator GCN1 yes yes 2 1.2E-05 198.25 By MS/MS 2 0 1 1 164860 164860 0 8768 2064 9058 21712 17429;17430 17429 2 55761 0 LLTYNAAR QHQVAHVATQLEAARLLTYNAARLLEAGKP TQLEAARLLTYNAARLLEAGKPFIKEASMA R L L A R L 2 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 8 0 920.50797 P45954 P45954 348 355 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.033356 86.833 By MS/MS 7.5 0.5 1 1 2 3283800 3283800 0 8769 904 9059 21713;21714 17431 17431 1 50422 0 LLVDSNNPK KTMKVLRCVCFFCSKLLVDSNNPKIKDILA CFFCSKLLVDSNNPKIKDILAKSKGQPKKR K L L P K I 0 0 2 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 9 0 998.53966 P24928 P24928 117 125 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0538 74.301 By MS/MS 2 0 1 1 108310 108310 0 8770 717 9060 21715 17432 17432 1 36636 0 LLVEGDNLR AVIHIDEQSGKEKYKLLVEGDNLRAVMATH GKEKYKLLVEGDNLRAVMATHGVKGTRTTS K L L L R A 0 1 1 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1027.5662 O14802 O14802 1225 1233 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0015983 126.41 By MS/MS 3 0 1 1 1261800 1261800 0 8771 139 9061 21716 17433 17433 1 23088 0 LLVESDINSIR SDDFRSKYQTEQSLRLLVESDINSIRRILD QSLRLLVESDINSIRRILDELTLCKSDLES R L L I R R 0 1 1 1 0 0 1 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 11 0 1257.6929 CON__O76011;CON__Q8IUT8;O76011 CON__O76011 153 163 KRT34 Keratin, type I cuticular Ha4 yes no 2 1.2446E-05 173.24 By MS/MS 10 0 1 1 94354 0 94354 + 8772 36 9062 21717 17434;17435 17434 2 0 120800 LLVGNKSDLTTK WLQEIDRYASENVNKLLVGNKSDLTTKKVV VNKLLVGNKSDLTTKKVVDNTTAKEFADSL K L L T K K 0 0 1 1 0 0 0 1 0 0 3 2 0 0 0 1 2 0 0 1 0 0 12 1 1287.7398 Q9H0U4;Q92928 Q9H0U4 117 128 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 2 0.011676 111.27 By MS/MS 8.5 0.5 1 1 2 568000 568000 0 8773 2416 9063 21718;21719 17436 17436 1 9254 0 LLVGVDEKLNPEDIKK EGGVDVGDVDAKAQKLLVGVDEKLNPEDIK LVGVDEKLNPEDIKKHLLVHAPEDKKEILA K L L K K H 0 0 1 2 0 0 2 1 0 1 3 3 0 0 1 0 0 0 0 2 0 0 16 2 1809.0248 P53396 P53396 152 167 ACLY ATP-citrate synthase yes yes 3 0.0036167 104.17 By MS/MS 4.5 1.12 1 1 1 1 4 5995200 5995200 0 8774 1030 9064 21720;21721;21722;21723 17437 17437 1 488070 0 LLVLSALAEK AAPGASLGSGRVEEKLLVLSALAEKLLPEP RVEEKLLVLSALAEKLLPEPGGDRARGARE K L L E K L 2 0 0 0 0 0 1 0 0 0 4 1 0 0 0 1 0 0 0 1 0 0 10 0 1055.659 Q13395 Q13395 230 239 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.0074936 109.48 By MS/MS 2 0.816 1 1 1 3 181180 181180 0 8775 1376 9065 21724;21725;21726 17438;17439;17440 17439 3 32643 0 LLVLYSGEDDELLQR EVQDLFEAQGNDRLKLLVLYSGEDDELLQR LLVLYSGEDDELLQRAAAGGLAMLTSMRPT K L L Q R A 0 1 0 2 0 1 2 1 0 0 5 0 0 0 0 1 0 0 1 1 0 0 15 0 1761.9149 Q9H3U1 Q9H3U1 822 836 UNC45A Protein unc-45 homolog A yes yes 2 5.0906E-17 266.26 By MS/MS 5 0.816 1 1 1 3 1630600 1630600 0 8776 2442 9066 21727;21728;21729 17441;17442;17443 17441 3 83574 0 LLVPDIQEIR PSPARATETDKEPQRLLVPDIQEIRVSPIV KEPQRLLVPDIQEIRVSPIVSKKGYLHFLE R L L I R V 0 1 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1194.6972 Q12756 Q12756 1562 1571 KIF1A Kinesin-like protein KIF1A yes yes 2 0.010797 85.67 By MS/MS 2.5 1.12 1 1 1 1 4 727160 727160 0 8777 1324 9067 21730;21731;21732;21733 17444 17444 1 175500 0 LLVPILLPEK ______________________________ GPLKRLLVPILLPEKCYDQLFVQWDLLHVP R L L E K C 0 0 0 0 0 0 1 0 0 1 4 1 0 0 2 0 0 0 0 1 0 0 10 0 1133.7424 O75352 O75352 12 21 MPDU1 Mannose-P-dolichol utilization defect 1 protein yes yes 2 0.0047974 106.04 By MS/MS 4 3.08 1 1 1 1 4 353410 353410 0 8778 314 9068 21734;21735;21736;21737 17445;17446;17447 17446 3 41085 0 LLVPTQYVGAIIGK AGAPAKQQQVDIPLRLLVPTQYVGAIIGKE RLLVPTQYVGAIIGKEGATIRNITKQTQSK R L L G K E 1 0 0 0 0 1 0 2 0 2 2 1 0 0 1 0 1 0 1 2 0 0 14 0 1470.881 Q9NZI8 Q9NZI8 200 213 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.0075657 96.756 By MS/MS 5 0 1 1 52246 52246 0 8779 2649 9069 21738 17448 17448 1 524 0 LLVSGFWGVAR ECSYTSADGQRHHSKLLVSGFWGVARHFNY HHSKLLVSGFWGVARHFNYVGDLMGSLAYC K L L A R H 1 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 0 1 0 2 0 0 11 0 1203.6764 Q9UBM7 Q9UBM7 394 404 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.0018999 112.11 By MS/MS 7 0 1 1 39315 39315 0 8780 2701 9070 21739 17449 17449 1 617.18 0 LLVTDMSDAEQYR KINKQHARRVYEILRLLVTDMSDAEQYRSY LRLLVTDMSDAEQYRSYRLDIKRRLISPYK R L L Y R S 1 1 0 2 0 1 1 0 0 0 2 0 1 0 0 1 1 0 1 1 0 0 13 0 1539.7239 O14929 O14929 337 349 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.014332 90.913 By MS/MS 7 0 1 1 428010 428010 0 8781 146 9071 21740 17450 17450 0 6719 0 LLVTELMR VTSEDKKFHETLEQRLLVTELMRLLGPSQE HETLEQRLLVTELMRLLGPSQEREIPPLLG R L L M R L 0 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 1 0 0 1 0 0 8 0 973.56304 Q9H6D7 Q9H6D7 119 126 HAUS4 HAUS augmin-like complex subunit 4 yes yes 2 0.010796 109.86 By MS/MS 7 0 1 1 117630 117630 0 8782 2456 9072 21741 17451 17451 1 1846.5 0 LLVVGITDPDPDIR VSQTAVQVVADVLSKLLVVGITDPDPDIRY KLLVVGITDPDPDIRYCVLASLDERFDAHL K L L I R Y 0 1 0 3 0 0 0 1 0 2 2 0 0 0 2 0 1 0 0 2 0 0 14 0 1521.8403 P42345 P42345 659 672 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00045228 147.72 By MS/MS 3.67 1.25 1 1 1 3 1065400 1065400 0 8783 879 9073 21742;21743;21744 17452;17453 17453 2 186440 0 LLVVTDPR GTFTNQIQAAFREPRLLVVTDPRADHQPLT AAFREPRLLVVTDPRADHQPLTEASYVNLP R L L P R A 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 2 0 0 8 0 911.54402 P08865 P08865 121 128 RPSA 40S ribosomal protein SA yes yes 2 0.021009 106.36 By MS/MS 8 1 1 1 2 2526200 2526200 0 8784 529 9074 21745;21746 17454;17455 17455 2 49716 0 LLWQDSR TLVLTLPTVAFLEDKLLWQDSRYRPLYPFS TVAFLEDKLLWQDSRYRPLYPFSLPYSDFP K L L S R Y 0 1 0 1 0 1 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 7 0 916.47667 Q9BYD3 Q9BYD3 273 279 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.024299 109.01 By MS/MS 7 0 1 1 2103300 2103300 0 8785 2370 9075 21747 17456 17456 1 33019 0 LLYEALVDCK SDWNLTTEKKHTLLRLLYEALVDCKKSDAA HTLLRLLYEALVDCKKSDAASKVMVELLGS R L L C K K 1 0 0 1 1 0 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 10 0 1222.6268 Q7L2H7 Q7L2H7 167 176 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 5.0431E-06 177.7 By MS/MS 8.5 1.12 1 1 1 1 4 41835000 41835000 0 8786 1762 9076 21748;21749;21750;21751 17457;17458;17459 17457 3 656920 0 LLYEALVDCKK SDWNLTTEKKHTLLRLLYEALVDCKKSDAA TLLRLLYEALVDCKKSDAASKVMVELLGSY R L L K K S 1 0 0 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 1 1 0 0 11 1 1350.7217 Q7L2H7 Q7L2H7 167 177 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2;3 0.0054424 96.113 By MS/MS 8 0.816 2 2 2 6 57341000 57341000 0 8787 1762 9077 21752;21753;21754;21755;21756;21757 17460;17461 17460 2 896130 0 LLYEALVDCKKSDAASK SDWNLTTEKKHTLLRLLYEALVDCKKSDAA YEALVDCKKSDAASKVMVELLGSYTEDNAS R L L S K V 3 0 0 2 1 0 1 0 0 0 3 3 0 0 0 2 0 0 1 1 0 0 17 2 1909.9819 Q7L2H7 Q7L2H7 167 183 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 0.0055572 94.487 By MS/MS 7 0 1 1 2240000 2240000 0 8788 1762 9078 21758 17462 17462 1 35164 0 LLYEELYNK ENTTAELTEEINKWRLLYEELYNKTKPFQL EINKWRLLYEELYNKTKPFQLQLDAFEVEK R L L N K T 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 0 0 0 2 0 0 0 9 0 1183.6125 O75330 O75330 581 589 HMMR Hyaluronan mediated motility receptor yes yes 2 0.00048104 147.29 By MS/MS 4 0 1 1 1106900 1106900 0 8789 311 9079 21759 17463 17463 1 104170 0 LLYISSENGGMDPSQK L L Q K 0 0 1 1 0 1 1 2 0 1 2 1 1 0 1 3 0 0 1 0 0 0 16 0 1737.8244 REV__P41586 yes yes 2 0.025044 78.655 By MS/MS 6.4 1.02 1 2 1 1 5 13023000 13023000 0 + 8790 2960 9080 21760;21761;21762;21763;21764 17464;17465 17464 1221 2 91416 0 LLYLGIR ______________________________ VGAFPMAKLLYLGIRQVSKPLANRIKEAAR K L L I R Q 0 1 0 0 0 0 0 1 0 1 3 0 0 0 0 0 0 0 1 0 0 0 7 0 846.53272 Q9H6K4 Q9H6K4 11 17 OPA3 Optic atrophy 3 protein yes yes 2 0.013605 126.05 By MS/MS 9.5 0.5 1 1 2 930960 930960 0 8791 2457 9081 21765;21766 17466 17466 1 19985 0 LLYNNVSNFGR VGDRCYDEKMYDAAKLLYNNVSNFGRLAST DAAKLLYNNVSNFGRLASTLVHLGEYQAAV K L L G R L 0 1 3 0 0 0 0 1 0 0 2 0 0 1 0 1 0 0 1 1 0 0 11 0 1295.6622 Q00610 Q00610 1216 1226 CLTC Clathrin heavy chain 1 yes yes 2 1.9335E-05 169.76 By MS/MS By matching 3 1.29 1 1 2 1 1 5 1 3846500 3775300 71185 8792 1262 9082 21767;21768;21769;21770;21771;21772 17467;17468;17469;17470;17471;17472 17471 6 359340 9060.8 LLYPLQEVER AFAEVLRLPKQQLRKLLYPLQEVERFLAPY QQLRKLLYPLQEVERFLAPYGRQDLHLRIF K L L E R F 0 1 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 0 1 1 0 0 10 0 1258.6921 Q8N3Z3 Q8N3Z3 47 56 GTPBP8 GTP-binding protein 8 yes yes 2 0.037124 72.848 By MS/MS 8 0 1 1 1766700 1766700 0 8793 1913 9083 21773 17473 17473 1 22304 0 LLYPPETGLFLVR MPWFHGKITREQAERLLYPPETGLFLVRES ERLLYPPETGLFLVRESTNYPGDYTLCVSC R L L V R E 0 1 0 0 0 0 1 1 0 0 4 0 0 1 2 0 1 0 1 1 0 0 13 0 1516.8654 P41240 P41240 95 107 CSK Tyrosine-protein kinase CSK yes yes 2 0.042767 72.096 By MS/MS 6 0 1 1 388180 388180 0 8794 869 9084 21774 17474 17474 1 2668.4 0 LMAFQPAPK VSCAAGVTISSVEKKLMAFQPAPKVIRCMT SSVEKKLMAFQPAPKVIRCMTNTPVVVQEG K L M P K V 2 0 0 0 0 1 0 0 0 0 1 1 1 1 2 0 0 0 0 0 0 0 9 0 1001.5368 Q96C36 Q96C36 108 116 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.00015804 157.21 By MS/MS 7.6 1.02 1 1 2 1 5 9627700 9627700 0 8795 2120 9085;9086 21775;21776;21777;21778;21779 17475;17476 17476 1014 2 119590 0 LMDEAVLALR IVKGLAGHLKSNSPRLMDEAVLALRNLARQ SNSPRLMDEAVLALRNLARQCSDSSAMESL R L M L R N 2 1 0 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 1 0 0 10 0 1129.6165 Q92616 Q92616 314 323 GCN1L1 Translational activator GCN1 yes yes 2 6.7192E-06 176.6 By MS/MS 2.2 0.748 1 2 2 5 5435600 5435600 0 8796 2064 9087;9088 21780;21781;21782;21783;21784 17477;17478;17479;17480;17481;17482;17483 17482 997 7 1657400 0 LMDLLGEGLKR EDKKKFKTRSGETVRLMDLLGEGLKRSMDK ETVRLMDLLGEGLKRSMDKLKEKERDKVLT R L M K R S 0 1 0 1 0 0 1 2 0 0 4 1 1 0 0 0 0 0 0 0 0 0 11 1 1243.6958 P54136 P54136 462 472 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.0014841 132.88 By MS/MS 5 0 2 2 7682600 7682600 0 8797 1043 9089;9090 21785;21786 17484;17485;17486 17485 577 3 77052 0 LMDVGLIAIR SEHLKNPVIAQKIQKLMDVGLIAIR_____ QKIQKLMDVGLIAIR_______________ K L M I R - 1 1 0 1 0 0 0 1 0 2 2 0 1 0 0 0 0 0 0 1 0 0 10 0 1099.6424 P31948 P31948 534 543 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 8.3267E-05 155.07 By MS/MS 5 0 2 2 1855300 1855300 0 8798 795 9091;9092 21787;21788 17487;17488 17488 389 2 18607 0 LMEIYQEK AVARYQRQAAEVMGRLMEIYQEKLYRPPPV AAEVMGRLMEIYQEKLYRPPPVLDALGRVI R L M E K L 0 0 0 0 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 8 0 1052.5212 Q92616 Q92616 1201 1208 GCN1L1 Translational activator GCN1 yes yes 2 0.0056429 122.52 By MS/MS 2.5 0.5 1 1 2 2057500 2057500 0 8799 2064 9093 21789;21790 17489 17489 1 624790 0 LMELHGEGSSSGK RKVKMLKKPKFELGKLMELHGEGSSSGKAT GKLMELHGEGSSSGKATGDETGAKVERADG K L M G K A 0 0 0 0 0 0 2 3 1 0 2 1 1 0 0 3 0 0 0 0 0 0 13 0 1330.6187 P61247 P61247 228 240 RPS3A 40S ribosomal protein S3a yes yes 2 0.0016567 113.38 By MS/MS 8 0 1 1 1267800 1267800 0 8800 1118 9094 21791 17490 17490 634 1 16006 0 LMEPAVEPLTQALK RRTRMLPVSGAFHTRLMEPAVEPLTQALKA RLMEPAVEPLTQALKAVDIKKPLVSVYSNV R L M L K A 2 0 0 0 0 1 2 0 0 0 3 1 1 0 2 0 1 0 0 1 0 0 14 0 1538.8378 Q8IVS2 Q8IVS2 273 286 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.00041324 161.93 By MS/MS 7 0 2 2 977880 977880 0 8801 1863 9095;9096 21792;21793 17491;17492 17491 954 2 15351 0 LMETQEEDVVLLTAGEHNK VANFIMESQRLELIRLMETQEEDVVLLTAG QEEDVVLLTAGEHNKACSLLGKLRLECADL R L M N K A 1 0 1 1 0 1 4 1 1 0 3 1 1 0 0 0 2 0 0 2 0 0 19 0 2155.0467 Q6PI48 Q6PI48 429 447 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 3 0.00015849 122.22 By MS/MS 5 0 1 1 2001200 2001200 0 8802 1717 9097 21794 17493 17493 916 1 20071 0 LMEVCKEK AQGSLSLKAYRLTPKLMEVCKEKDFSPEAL AYRLTPKLMEVCKEKDFSPEALKKANITFE K L M E K D 0 0 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 8 1 1035.5093 O15372 O15372 173 180 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.0098462 143.28 By MS/MS 8 0.816 1 1 1 3 3072000 3072000 0 8803 186 9098 21795;21796;21797 17494 17494 1 48589 0 LMGDYLLR KVLQARRERQDRISRLMGDYLLRGYRMLGE RQDRISRLMGDYLLRGYRMLGETCADCGTI R L M L R G 0 1 0 1 0 0 0 1 0 0 3 0 1 0 0 0 0 0 1 0 0 0 8 0 979.51609 O60232 O60232 37 44 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 0.0057266 122.13 By MS/MS 9 0 2 2 4257000 4257000 0 8804 250 9099;9100 21798;21799 17495;17496 17496 112 2 83779 0 LMGEDEKPAAK KGKELNEFREKHNIRLMGEDEKPAAKENSE HNIRLMGEDEKPAAKENSEGAGAKASSAGV R L M A K E 2 0 0 1 0 0 2 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 11 1 1187.5856 Q9UHV9 Q9UHV9 126 136 PFDN2 Prefoldin subunit 2 yes yes 2 0.0038553 125.97 By MS/MS 9.5 0.5 1 1 2 869100 869100 0 8805 2732 9101 21800;21801 17497 17497 1 19489 0 LMGLEALK GRPFLIIKDQDRKSRLMGLEALKSHIMAAK DQDRKSRLMGLEALKSHIMAAKAVANTMRT R L M L K S 1 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 0 0 0 0 8 0 873.49937 P48643 P48643 28 35 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.02311 96.19 By MS/MS 6 0 2 2 2712700 2712700 0 8806 940 9102;9103 21802;21803 17498;17499 17498 493 2 18648 0 LMPEIVATASK LAEVMAGLGVEKLEKLMPEIVATASKVDIA KLEKLMPEIVATASKVDIAPHVRDGYIMMF K L M S K V 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 1 0 0 1 0 0 11 0 1158.6318 Q92616 Q92616 1735 1745 GCN1L1 Translational activator GCN1 yes yes 2 0.026472 82.261 By MS/MS 2 0 1 1 2024100 2024100 0 8807 2064 9104 21804 17500 17500 1 684640 0 LMQGDEICLR SGNEDLVIIWLRDMRLMQGDEICLRYKGDL LRDMRLMQGDEICLRYKGDLAPLWKGIGHV R L M L R Y 0 1 0 1 1 1 1 1 0 1 2 0 1 0 0 0 0 0 0 0 0 0 10 0 1233.5846 Q92900 Q92900 367 376 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0065657 102.06 By MS/MS 3 0 1 1 254090 254090 0 8808 2077 9105 21805 17501 17501 1 4649.2 0 LMQQLLESDK LVPAIKEDAGGMIQRLMQQLLESDKYAERK GMIQRLMQQLLESDKYAERKGAAYGLAGLV R L M D K Y 0 0 0 1 0 2 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 0 10 0 1203.6169 Q92616 Q92616 1381 1390 GCN1L1 Translational activator GCN1 yes yes 2 0.00027977 128.91 By MS/MS 2 0 1 1 413840 413840 0 8809 2064 9106 21806 17502 17502 1 139980 0 LMQQLLESDKYAER LVPAIKEDAGGMIQRLMQQLLESDKYAERK RLMQQLLESDKYAERKGAAYGLAGLVKGLG R L M E R K 1 1 0 1 0 2 2 0 0 0 3 1 1 0 0 1 0 0 1 0 0 0 14 1 1722.8611 Q92616 Q92616 1381 1394 GCN1L1 Translational activator GCN1 yes yes 3 0.032871 71.513 By MS/MS 1.5 0.5 1 1 2 1819100 1819100 0 8810 2064 9107 21807;21808 17503 17503 998 1 610450 0 LMSAISK LAEEPEAVLKGAKPKLMSAISKTFCPAHKS VLKGAKPKLMSAISKTFCPAHKSYIIAGGL K L M S K T 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 0 0 0 0 0 0 7 0 748.41531 P49327 P49327 1872 1878 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.024702 108.09 By MS/MS 2.5 0.5 1 1 2 1613900 1613900 0 8811 946 9108 21809;21810 17504 17504 506 1 359140 0 LMSALLSGLTDR LTTQCPQDLTPYSGKLMSALLSGLTDRNSV SGKLMSALLSGLTDRNSVIQKSCAFAMGHL K L M D R N 1 1 0 1 0 0 0 1 0 0 4 0 1 0 0 2 1 0 0 0 0 0 12 0 1275.6857 Q5VYK3 Q5VYK3 1401 1412 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 1.7353E-08 206.73 By MS/MS 2 0 1 1 197720 197720 0 8812 1656 9109 21811 17505 17505 900 1 66877 0 LMTQAQLEEATR TFKPAIQELKPPTYKLMTQAQLEEATRQAV TYKLMTQAQLEEATRQAVEAAKVRLKMPPV K L M T R Q 2 1 0 0 0 2 2 0 0 0 2 0 1 0 0 0 2 0 0 0 0 0 12 0 1389.6922 P82650 P82650 105 116 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 7.2922E-13 248.98 By MS/MS By matching 7.25 0.433 3 1 3 1 9832500 9775600 56937 8813 1229 9110;9111 21812;21813;21814;21815 17506;17507 17506 738 2 152470 102540 LNAALATPAK GCQKYFYRSLARHARLNAALATPAKEMGMG ARHARLNAALATPAKEMGMGNVERCRGFSA R L N A K E 4 0 1 0 0 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 10 0 968.56548 Q9NU22 Q9NU22 4206 4215 MDN1 Midasin yes yes 2 0.0083488 98.048 By MS/MS 1 0 1 1 200950 200950 0 8814 2580 9112 21816 17508 17508 1 48423 0 LNAGQIPLDEDDPR SLYKLSCSAYFTFLKLNAGQIPLDEDDPRL KLNAGQIPLDEDDPRLHLSHRVEQSTDDMI K L N P R L 1 1 1 3 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 14 0 1551.7529 Q96Q15 Q96Q15 1757 1770 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.00043971 161.25 By MS/MS 1.5 0.5 1 1 2 681450 681450 0 8815 2213 9113 21817;21818 17509;17510 17509 2 196730 0 LNAILFK QFGVVMGTVPRLRPRLNAILFKLQFSEQVE TVPRLRPRLNAILFKLQFSEQVENIKPEIV R L N F K L 1 0 1 0 0 0 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 817.50617 O60610 O60610 937 943 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.012985 127.66 By MS/MS 3 0 1 1 308960 308960 0 8816 266 9114 21819 17511 17511 1 5653 0 LNATASLEQER CPQPPPAPQPQARSRLNATASLEQERSERP ARSRLNATASLEQERSERPRAPGPQAGPGP R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 6.0619E-05 155.33 By MS/MS 1 0 1 1 232280 232280 0 8817 359 9115 21820 17512 17512 1 55972 0 LNDFASTVR PEPKIIDAALRACRRLNDFASTVRILEVVK LRACRRLNDFASTVRILEVVKDKAGPHKEI R L N V R I 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 9 0 1021.5193 P20674 P20674 99 107 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 4.6201E-07 192.26 By MS/MS 10 0 1 1 1489700 1489700 0 8818 673 9116 21821 17513 17513 1 80290 0 LNDGSQITYEK GKKVVQLDVRDNMVKLNDGSQITYEKCLIA NMVKLNDGSQITYEKCLIATGGTPRSLSAI K L N E K C 0 0 1 1 0 1 1 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 11 0 1266.6092 O95831 O95831 245 255 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 4.6024E-13 231.07 By MS/MS 4.8 2.04 1 2 1 1 5 26866000 26866000 0 8819 429 9117 21822;21823;21824;21825;21826 17514;17515;17516;17517 17517 4 265370 0 LNDLEDALQQAK AEQRGENALKDAKNKLNDLEDALQQAKEDL KNKLNDLEDALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 2 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1356.6885 CON__P04264;P04264 P04264 444 455 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.0242E-37 279.9 By MS/MS By MS/MS 3.75 2.2 2 2 2 2 2 1 1 6 6 10419000 7080700 3338500 + 8820 471;45 9118 21827;21828;21829;21830;21831;21832;21833;21834;21835;21836;21837;21838 17518;17519;17520;17521;17522;17523;17524;17525;17526;17527;17528;17529 17519 12 659310 2840500 LNDLEDALQQAKEDLAR AEQRGENALKDAKNKLNDLEDALQQAKEDL DLEDALQQAKEDLARLLRDYQELMNTKLAL K L N A R L 3 1 1 3 0 2 2 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 17 1 1940.9803 CON__P04264;P04264 P04264 444 460 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.0022905 104.55 By MS/MS 5.5 0.5 1 1 2 396140 396140 0 + 8821 471;45 9119 21839;21840 17530;17531;17532 17530 3 3080.5 0 LNDLEEALQQAK AEQRGEHALKDARNKLNDLEEALQQAKEDL RNKLNDLEEALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1370.7042 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 442 453 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 4.8411E-29 272.94 By MS/MS By MS/MS 4.43 2.38 1 2 1 1 1 1 4 3 2140200 822960 1317200 + 8822 55 9120 21841;21842;21843;21844;21845;21846;21847 17533;17534;17535;17536;17537 17535 3 78050 844730 LNDLIQR KDAGLKNGVPAVGLKLNDLIQRLQLCYQLT GVPAVGLKLNDLIQRLQLCYQLTTVGKFEE K L N Q R L 0 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 870.49232 P53621 P53621 1003 1009 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0072079 146.54 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 7993300 7993300 0 8823 1034 9121 21848;21849;21850;21851;21852;21853;21854;21855 17538;17539;17540;17541 17541 4 483160 0 LNDMYGDYK VECCPVLLGPPLLGRLNDMYGDYKYTYWAC PPLLGRLNDMYGDYKYTYWACGVVLIISGI R L N Y K Y 0 0 1 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 9 0 1117.475 P53985 P53985 412 420 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.031168 83.647 By MS/MS 1 0 1 1 113340 113340 0 8824 1038 9122 21856 17542 17542 575 1 27310 0 LNDNVFATPSPIIQQLEK ARNNKSEEAIDTESRLNDNVFATPSPIIQQ NVFATPSPIIQQLEKSDAEYTNSPLVPTFC R L N E K S 1 0 2 1 0 2 1 0 0 2 2 1 0 1 2 1 1 0 0 1 0 0 18 0 2026.0735 Q8IX90 Q8IX90 258 275 SKA3 Spindle and kinetochore-associated protein 3 yes yes 2 0.00019818 132.97 By MS/MS 6 0 1 1 440110 440110 0 8825 1873 9123 21857 17543 17543 1 3025.4 0 LNDSILQATEQR RLSRENRDLKDEIVRLNDSILQATEQRRRA IVRLNDSILQATEQRRRAEENALQQKACGS R L N Q R R 1 1 1 1 0 2 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1386.7103 P15924 P15924 1256 1267 DSP Desmoplakin yes yes 2 1.3091E-60 331.8 By MS/MS By MS/MS 4.12 3.52 2 2 1 1 2 4 4 3785700 2484300 1301500 8826 628 9124 21858;21859;21860;21861;21862;21863;21864;21865 17544;17545;17546;17547;17548;17549;17550 17545 7 497010 491960 LNDYIFSFDK VAYGCIKYADLSHNRLNDYIFSFDKMLDDR LSHNRLNDYIFSFDKMLDDRGNTAAYLLYA R L N D K M 0 0 1 2 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 0 0 10 0 1260.6027 P54136 P54136 513 522 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 2.256E-20 256.24 By MS/MS 7 1.41 1 1 1 1 1 5 6683300 6683300 0 8827 1043 9125 21866;21867;21868;21869;21870 17551;17552 17551 2 67475 0 LNEAAAGLNQAATELVQASR SLPPSTGTFQEAQSRLNEAAAGLNQAATEL AGLNQAATELVQASRGTPQDLARASGRFGQ R L N S R G 6 1 2 0 0 2 2 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 20 0 2026.0443 Q9Y490 Q9Y490 1242 1261 TLN1 Talin-1 yes yes 2 6.4002E-74 361.39 By MS/MS 2 0 1 1 276580 276580 0 8828 2888 9126 21871 17553 17553 1 93552 0 LNEILQAR FAKGTEITHAVVIKKLNEILQARGKKGTDR HAVVIKKLNEILQARGKKGTDRAAQIELLQ K L N A R G 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 955.54508 Q99613;B5ME19 Q99613 333 340 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 6.2755E-05 157.68 By MS/MS By matching 6.5 2.65 1 1 1 1 1 1 2 7 1 66862000 64187000 2674900 8829 2252 9127 21872;21873;21874;21875;21876;21877;21878;21879 17554;17555;17556;17557;17558 17554 5 4548200 3424600 LNEIVGNEDTVSR GHYELPWVEKYRPVKLNEIVGNEDTVSRLE VKLNEIVGNEDTVSRLEVFAREGNVPNIII K L N S R L 0 1 2 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1444.7158 P35250 P35250 47 59 RFC2 Replication factor C subunit 2 yes yes 2 1.3317E-05 232.78 By MS/MS 7.5 0.5 1 1 2 5913800 5913800 0 8830 817 9128 21880;21881 17559 17559 1 91113 0 LNELESDLTFK SDPEGENIHAGLLKKLNELESDLTFKIGPE LLKKLNELESDLTFKIGPEYKSMKSCLYVG K L N F K I 0 0 1 1 0 0 2 0 0 0 3 1 0 1 0 1 1 0 0 0 0 0 11 0 1307.6609 Q6P996 Q6P996 552 562 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 4.3605E-09 217.02 By MS/MS 4 0 1 1 1775500 1775500 0 8831 1715 9129 21882 17560 17560 1 167090 0 LNELLVK IAAGLVDDPRAMVGRLNELLVKALERH___ DPRAMVGRLNELLVKALERH__________ R L N V K A 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 7 0 827.51165 Q12931 Q12931 693 699 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.0009082 176.66 By MS/MS By matching 5 0 2 1 1 3751900 3712400 39493 8832 1340 9130 21883;21884 17561 17561 1 37233 33166 LNEPIKVLCR EGMLEYLEDIIGCGRLNEPIKVLCRRVEIL IGCGRLNEPIKVLCRRVEILNEHRGEKLNR R L N C R R 0 1 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 1 1240.6962 Q9NTJ3 Q9NTJ3 263 272 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.0088796 107.21 By MS/MS 3 0 1 1 326910 326910 0 8833 2575 9131 21885 17562 17562 1 5981.5 0 LNEQEGVPSVFNPPPSRPLQVNTADHR LEQHNWNIEAAVQDRLNEQEGVPSVFNPPP PPPSRPLQVNTADHRIYSYVVSRPQPRGLL R L N H R I 1 2 3 1 0 2 2 1 1 0 2 0 0 1 5 2 1 0 0 3 0 0 27 1 2997.5057 Q96CS3 Q96CS3 51 77 FAF2 FAS-associated factor 2 yes yes 3;4 9.9283E-05 87.802 By MS/MS 6 0 2 2 13329000 13329000 0 8834 2126 9132 21886;21887 17563;17564;17565;17566 17566 4 91626 0 LNEQQSVLQR AEEEIKQEMNTLQQKLNEQQSVLQRIAAPN TLQQKLNEQQSVLQRIAAPNMKAMEKLESV K L N Q R I 0 1 1 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1213.6415 Q14683 Q14683 1010 1019 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 1.1169E-14 232.72 By MS/MS 2.5 1.12 1 1 1 1 4 4083600 4083600 0 8835 1451 9133 21888;21889;21890;21891 17567 17567 1 163150 0 LNEQSPTR DLQQYQSQAKQLFRKLNEQSPTRCTLEAGA AKQLFRKLNEQSPTRCTLEAGAMTFHYIIE K L N T R C 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 8 0 943.47231 O75396 O75396 44 51 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0015106 143.28 By MS/MS 8.5 0.5 1 1 2 650630 650630 0 8836 323 9134 21892;21893 17568;17569 17568 2 12805 0 LNESTFDTQITK IVVDAIDVLKSRFTKLNESTFDTQITKKMG FTKLNESTFDTQITKKMGYYKILDVMYSRL K L N T K K 0 0 1 1 0 1 1 0 0 1 1 1 0 1 0 1 3 0 0 0 0 0 12 0 1395.6882 P78527 P78527 1858 1869 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.7857E-18 288.15 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 7263000 7235800 27190 8837 1225 9135 21894;21895;21896;21897;21898 17570;17571;17572 17570 3 1981400 27190 LNESTFDTQITKK IVVDAIDVLKSRFTKLNESTFDTQITKKMG TKLNESTFDTQITKKMGYYKILDVMYSRLP K L N K K M 0 0 1 1 0 1 1 0 0 1 1 2 0 1 0 1 3 0 0 0 0 0 13 1 1523.7831 P78527 P78527 1858 1870 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 1.3076E-07 213.84 By MS/MS 1.8 0.748 2 2 1 5 2835200 2835200 0 8838 1225 9136 21899;21900;21901;21902;21903 17573;17574;17575 17575 3 749300 0 LNFELTDALK QSQPATTDSTVTVQKLNFELTDALKTGITA VTVQKLNFELTDALKTGITAAKEKFDATMK K L N L K T 1 0 1 1 0 0 1 0 0 0 3 1 0 1 0 0 1 0 0 0 0 0 10 0 1162.6234 P23786 P23786 415 424 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 2 0.0010744 120.63 By MS/MS 5 0 1 1 442220 442220 0 8839 710 9137 21904 17576 17576 1 4435.3 0 LNFGDDIPSALR IANLQRAYSLAKEQRLNFGDDIPSALRIAK EQRLNFGDDIPSALRIAKKKRWNSIEERRI R L N L R I 1 1 1 2 0 0 0 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1316.6725 Q9UNE7 Q9UNE7 129 140 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 3.4407E-05 181.4 By MS/MS 8.4 1.02 1 2 1 1 5 6514400 6514400 0 8840 2786 9138 21905;21906;21907;21908;21909 17577;17578 17578 2 103190 0 LNFHPDQEDQFFSLVHEK ITLPHLCSVLLAFARLNFHPDQEDQFFSLV HPDQEDQFFSLVHEKLGSELPGLEPALQVD R L N E K L 0 0 1 2 0 2 2 0 2 0 2 1 0 3 1 1 0 0 0 1 0 0 18 0 2229.0491 Q969Z0 Q969Z0 379 396 TBRG4 Protein TBRG4 yes yes 3;4 0.001222 109.87 By MS/MS 6 0 2 2 4336600 4336600 0 8841 2099 9139 21910;21911 17579;17580 17580 2 29810 0 LNFSHGTHEYHAETIK ETLKEMIKSGMNVARLNFSHGTHEYHAETI NFSHGTHEYHAETIKNVRTATESFASDPIL R L N I K N 1 0 1 0 0 0 2 1 3 1 1 1 0 1 0 1 2 0 1 0 0 0 16 0 1882.8962 P14618 P14618 74 89 PKM Pyruvate kinase PKM yes yes 4 0.035436 54.094 By MS/MS 6.5 0.5 1 1 2 2677500 2677500 0 8842 614 9140 21912;21913 17581 17581 1 22513 0 LNGTDPEDVIR GPINFTMFLTMFGEKLNGTDPEDVIRNAFA FGEKLNGTDPEDVIRNAFACFDEEATGTIQ K L N I R N 0 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1227.6095 P19105;O14950;P24844 P19105 93 103 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 2 3.1975E-09 212.28 By MS/MS 9.5 0.5 1 1 2 1717900 1717900 0 8843 148 9141 21914;21915 17582 17582 1 42007 0 LNHFFEGVEAR LQSYVIYSLGQPLEKLNHFFEGVEARVAQG PLEKLNHFFEGVEARVAQGIREEEVSYQLA K L N A R V 1 1 1 0 0 0 2 1 1 0 1 0 0 2 0 0 0 0 0 1 0 0 11 0 1317.6466 Q9NV70 Q9NV70 778 788 EXOC1 Exocyst complex component 1 yes yes 2;3 0.0006766 128.03 By MS/MS 4 0 2 2 2780200 2780200 0 8844 2589 9142 21916;21917 17583;17584 17584 2 261640 0 LNHYVLYK FVLRALRMLPSTSRRLNHYVLYKAVQGFFT LPSTSRRLNHYVLYKAVQGFFTSNNATRDF R L N Y K A 0 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 8 0 1048.5706 O43242 O43242 108 115 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.0075889 107.43 By MS/MS 6 0 1 1 2176500 2176500 0 8845 198 9143 21918 17585 17585 1 14962 0 LNIFDMMAVTK TDDLKKRKNIFTGKRLNIFDMMAVTKEAPE TGKRLNIFDMMAVTKEAPETDTSPSLWDVE R L N T K E 1 0 1 1 0 0 0 0 0 1 1 1 2 1 0 0 1 0 0 1 0 0 11 0 1281.6461 Q92665 Q92665 256 266 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.00061097 126.71 By MS/MS 7 0 1 1 37764 37764 0 8846 2067 9144 21919 17586;17587 17587 2 592.83 0 LNIGDLQVTK DEAVILCKTAIGALKLNIGDLQVTKETIED IGALKLNIGDLQVTKETIEDVEEMLNNLPG K L N T K E 0 0 1 1 0 1 0 1 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1099.6237 Q9UNM6 Q9UNM6 123 132 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0084885 97.734 By MS/MS 7 0 1 1 3614100 3614100 0 8847 2791 9145 21920 17588 17588 1 56735 0 LNILDTLSK AVPLALALISVSNPRLNILDTLSKFSHDAD SVSNPRLNILDTLSKFSHDADPEVSYNSIF R L N S K F 0 0 1 1 0 0 0 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 9 0 1015.5914 Q13200 Q13200 704 712 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00017047 156.83 By MS/MS 6 1.41 1 1 1 1 1 5 10280000 10280000 0 8848 1365 9146 21921;21922;21923;21924;21925 17589;17590;17591 17589 3 760720 0 LNIPVSQVNPR IISEGNETVEDIAARLNIPVSQVNPRDAKA IAARLNIPVSQVNPRDAKACVVHGSDLKDM R L N P R D 0 1 2 0 0 1 0 0 0 1 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1235.6986 P05023;P13637 P05023 648 658 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 yes no 2 0.00023015 140.49 By MS/MS By MS/MS 3.78 2.48 1 2 2 2 1 1 6 3 39307000 38813000 494160 8849 481 9147 21926;21927;21928;21929;21930;21931;21932;21933;21934 17592;17593;17594;17595;17596;17597;17598;17599 17595 8 5574400 694340 LNISFPATGCQK ______________________________ ______________________________ K L N Q K L 1 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 12 0 1334.6653 P62753 P62753 3 14 RPS6 40S ribosomal protein S6 yes yes 2 8.283E-09 217.02 By MS/MS 8 0 1 1 10456000 10456000 0 8850 1169 9148 21935 17600 17600 1 132000 0 LNIWGEAR LSKRPMPLSARGNSRLNIWGEARVGSELCA SARGNSRLNIWGEARVGSELCAGWEEQFEV R L N A R V 1 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 8 0 957.50321 Q12789 Q12789 1175 1182 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.03504 88.177 By MS/MS 2 0 1 1 226210 226210 0 8851 1328 9149 21936 17601 17601 1 76515 0 LNKHEENLK PLDLRPKKTRAMRRRLNKHEENLKTKKQQR RAMRRRLNKHEENLKTKKQQRKERLYPLRK R L N L K T 0 0 2 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 9 1 1123.5986 P42766 P42766 95 103 RPL35 60S ribosomal protein L35 yes yes 3 0.00051363 137.14 By MS/MS 9.5 0.5 1 1 2 1049100 1049100 0 8852 888 9150 21937;21938 17602 17602 1 23540 0 LNKLEDTITLIK VDQSEILYQAMDIIRLNKLEDTITLIKGKI IIRLNKLEDTITLIKGKIEEVHLPVEKVDV R L N I K G 0 0 1 1 0 0 1 0 0 2 3 2 0 0 0 0 2 0 0 0 0 0 12 1 1399.8286 O60678 O60678 299 310 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2;3 3.7344E-06 218.15 By MS/MS 5.5 0.5 2 2 4 4296600 4296600 0 8853 269 9151 21939;21940;21941;21942 17603;17604 17604 2 36173 0 LNLATECLPLDK DKSMQPGTSLAKAKRLNLATECLPLDKYLQ AKRLNLATECLPLDKYLQWEIGNKNLTLDQ R L N D K Y 1 0 1 1 1 0 1 0 0 0 4 1 0 0 1 0 1 0 0 0 0 0 12 0 1385.7225 Q7L0Y3 Q7L0Y3 329 340 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 1.7996E-12 262.07 By MS/MS 7 0 1 1 3361900 3361900 0 8854 1759 9152 21943 17605 17605 1 52776 0 LNLENKDYK IHKNADGKIISLDAKLNLENKDYKKTTKVT ISLDAKLNLENKDYKKTTKVTWLAETTHAL K L N Y K K 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 9 1 1135.5873 P07814 P07814 594 602 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0039229 134.26 By MS/MS 3 0 1 1 0 0 0 8855 512 9153 21944 17606 17606 1 0 0 LNLENKDYKK IHKNADGKIISLDAKLNLENKDYKKTTKVT SLDAKLNLENKDYKKTTKVTWLAETTHALP K L N K K T 0 0 2 1 0 0 1 0 0 0 2 3 0 0 0 0 0 0 1 0 0 0 10 2 1263.6823 P07814 P07814 594 603 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 1.3854E-05 179.81 By MS/MS 3.5 0.957 1 2 2 1 6 9774100 9774100 0 8856 512 9154 21945;21946;21947;21948;21949;21950 17607;17608 17608 2 310880 0 LNLIAELESR AFGLGTWQVQRRKWKLNLIAELESRVLAEP RRKWKLNLIAELESRVLAEPVPLPADPMEL K L N S R V 1 1 1 0 0 0 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1156.6452 Q15526 Q15526 88 97 SURF1 Surfeit locus protein 1 yes yes 2 1.0237E-07 192.12 By MS/MS 8 0 1 1 137980 137980 0 8857 1518 9155 21951 17609 17609 1 1741.9 0 LNLNNTVLSK EALGIRKPYIWEYSRLNLNNTVLSKRKLTW WEYSRLNLNNTVLSKRKLTWFVNEGLVDGW R L N S K R 0 0 3 0 0 0 0 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 1114.6346 P07814 P07814 426 435 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0001459 150.81 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 6 1 21152000 21028000 124700 8858 512 9156 21952;21953;21954;21955;21956;21957;21958 17610;17611;17612;17613;17614;17615;17616;17617 17617 8 647960 15872 LNLSQVR VGTPGRLDDLVSTGKLNLSQVRFLVLDEAD DDLVSTGKLNLSQVRFLVLDEADGLLSQGY K L N V R F 0 1 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 7 0 828.48175 Q92499 Q92499 359 365 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.025527 108.09 By MS/MS 4.5 0.5 1 1 2 2376100 2376100 0 8859 2046 9157 21959;21960 17618 17618 1 127180 0 LNLVDLAGSENIGR KETTIDGEELVKIGKLNLVDLAGSENIGRS KLNLVDLAGSENIGRSGAVDKRAREAGNIN K L N G R S 1 1 2 1 0 0 1 2 0 1 3 0 0 0 0 1 0 0 0 1 0 0 14 0 1469.7838 P52732 P52732 261 274 KIF11 Kinesin-like protein KIF11 yes yes 2 6.518E-05 163.45 By MS/MS 3.5 0.5 1 1 2 65022 65022 0 8860 1021 9158 21961;21962 17619;17620 17620 2 1189.7 0 LNLYAASLR DEMCRHLFQLLSIERLNLYAASLRVCFLLF LLSIERLNLYAASLRVCFLLFESMREHLKF R L N L R V 2 1 1 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 9 0 1019.5764 Q92538 Q92538 470 478 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0048784 109.44 By MS/MS 2 0 1 1 390880 390880 0 8861 2050 9159 21963 17621 17621 1 132210 0 LNLYELK LATDVQTVAQRLKFRLNLYELKEGRQIKPY VAQRLKFRLNLYELKEGRQIKPYTLMSMVA R L N L K E 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 7 0 891.50657 P49720 P49720 71 77 PSMB3 Proteasome subunit beta type-3 yes yes 2 0.009865 135.77 By MS/MS 8.5 0.5 1 1 2 2903500 2903500 0 8862 956 9160 21964;21965 17622 17622 1 52462 0 LNMTPEEAER CRIHQCISINMLADKLNMTPEEAERWIVNL MLADKLNMTPEEAERWIVNLIRNARLDAKI K L N E R W 1 1 1 0 0 0 3 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 10 0 1188.5445 P60228 P60228 360 369 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0091953 96.143 By MS/MS 6.5 0.5 1 1 2 3526700 3526700 0 8863 1090 9161 21966;21967 17623 17623 1 26552 0 LNNLVLFDK KAKKKKWSKGKVRDKLNNLVLFDKATYDKL GKVRDKLNNLVLFDKATYDKLCKEVPNYKL K L N D K A 0 0 2 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 9 0 1074.6073 P62851 P62851 44 52 RPS25 40S ribosomal protein S25 yes yes 2 0.00021091 155.58 By MS/MS By matching 9.33 0.471 2 1 2 1 19388000 19342000 45940 8864 1176 9162 21968;21969;21970 17624;17625 17624 2 567720 104760 LNNLVLFDKATYDK KAKKKKWSKGKVRDKLNNLVLFDKATYDKL KLNNLVLFDKATYDKLCKEVPNYKLITPAV K L N D K L 1 0 2 2 0 0 0 0 0 0 3 2 0 1 0 0 1 0 1 1 0 0 14 1 1652.8774 P62851 P62851 44 57 RPS25 40S ribosomal protein S25 yes yes 3 0.0027798 118.76 By MS/MS 9.5 0.5 1 1 2 608340 608340 0 8865 1176 9163 21971;21972 17626 17626 0 15601 0 LNPADAPNPVVFVATK SGIRSSSQPAAKRQKLNPADAPNPVVFVAT NPADAPNPVVFVATKDTRALRKALTHLEMR K L N T K D 3 0 2 1 0 0 0 0 0 0 1 1 0 1 3 0 1 0 0 3 0 0 16 0 1651.8934 O94776 O94776 596 611 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.00050937 130.61 By MS/MS 5 0 1 1 1809600 1809600 0 8866 365 9164 21973 17627 17627 1 18149 0 LNPGCFYR EMIYSGATREHLCDRLNPGCFYRLRVYCIS REHLCDRLNPGCFYRLRVYCISDGGQSAVS R L N Y R L 0 1 1 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 8 0 1025.4753 Q9Y2H6 Q9Y2H6 628 635 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 0.021955 97.473 By MS/MS 3.5 0.5 1 1 2 403820 403820 0 8867 2828 9165 21974;21975 17628 17628 1 16970 0 LNQDQLDAVSK GKLDDYQERMNKGERLNQDQLDAVSKYQEV KGERLNQDQLDAVSKYQEVTNNLEFAKELQ R L N S K Y 1 0 1 2 0 2 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1229.6252 Q14444 Q14444 88 98 CAPRIN1 Caprin-1 yes yes 2 2.0429E-05 163.46 By MS/MS 4 0 1 1 1204600 1204600 0 8868 1440 9166 21976 17629 17629 1 113360 0 LNQPPEDGISSVK ______________________________ FKLNQPPEDGISSVKFSPNTSQFLLVSSWD K L N V K F 0 0 1 1 0 1 1 1 0 1 1 1 0 0 2 2 0 0 0 1 0 0 13 0 1382.7042 O43684 O43684 9 21 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0010084 125.97 By MS/MS 7 0 1 1 636970 636970 0 8869 228 9167 21977 17630 17630 1 9999.3 0 LNQSSPDNVTDTK FLHSQEMSILNSNIKLNQSSPDNVTDTKGA IKLNQSSPDNVTDTKGALSPITDNTEVDTG K L N T K G 0 0 2 2 0 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 13 0 1417.6685 Q08AD1 Q08AD1 595 607 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 4.0372E-05 179.94 By MS/MS 2 0 1 1 305040 305040 0 8870 1314 9168 21978 17631 17631 1 103180 0 LNQTIASLKK EEEETKKKLNENTLKLNQTIASLKKLILEV ENTLKLNQTIASLKKLILEVGEKSQAPTLE K L N K K L 1 0 1 0 0 1 0 0 0 1 2 2 0 0 0 1 1 0 0 0 0 0 10 1 1114.671 Q9C037 Q9C037 239 248 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 3 0.03799 63.073 By MS/MS 6 0 1 1 0 0 0 8871 2386 9169 21979 17632 17632 1 0 0 LNQTTFTATR AVPTLGLKTDAIPGRLNQTTFTATRPGVYY AIPGRLNQTTFTATRPGVYYGQCSEICGAN R L N T R P 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 4 0 0 0 0 0 10 0 1151.5935 P00403 P00403 179 188 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 1.1639E-07 190.57 By MS/MS 9 0 1 1 1244300 1244300 0 8872 444 9170 21980 17633 17633 1 24489 0 LNQWCNVVR AYAKWVQSHRDLPIKLNQWCNVVRWEFKHP RDLPIKLNQWCNVVRWEFKHPQPFLRTREF K L N V R W 0 1 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 9 0 1187.587 P07814 P07814 1144 1152 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 6.3424E-05 169.06 By MS/MS 3.5 0.5 1 1 2 1885400 1885400 0 8873 512 9171 21981;21982 17634 17634 1 90428 0 LNQYFQK AGLHGNWTLENAKARLNQYFQKEKIQGEYK TLENAKARLNQYFQKEKIQGEYKYTQVGPD R L N Q K E 0 0 1 0 0 2 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 7 0 939.48142 Q08211 Q08211 185 191 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0002997 164.1 By MS/MS 3 0 1 1 0 0 0 8874 1307 9172 21983 17635 17635 1 0 0 LNRIENALK ANNSLSFEKAYCEYRLNRIENALKTIESAN AYCEYRLNRIENALKTIESANQQTDKLKEL R L N L K T 1 1 2 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1069.6244 O76094 O76094 91 99 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.001171 123.21 By MS/MS 5 0 1 1 957800 957800 0 8875 362 9173 21984 17636 17636 1 9606.2 0 LNRLPAAGVGDMVMATVK AKNLYIISVKGIKGRLNRLPAAGVGDMVMA LPAAGVGDMVMATVKKGKPELRKKVHPAVV R L N V K K 3 1 1 1 0 0 0 2 0 0 2 1 2 0 1 0 1 0 0 3 0 0 18 1 1841.9856 P62829 P62829 49 66 RPL23 60S ribosomal protein L23 yes yes 3 1.2848E-07 210.91 By MS/MS 10 0 1 1 729260 729260 0 8876 1173 9174 21985 17637;17638 17638 672;673 2 39304 0 LNSGDYK AKVMQVLNADAIVVKLNSGDYKTIHLSSIR NADAIVVKLNSGDYKTIHLSSIRPPRLEGE K L N Y K T 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 7 0 795.37628 Q7KZF4 Q7KZF4 360 366 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.045711 120.62 By MS/MS 4 0 1 1 0 0 0 8877 1755 9175 21986 17639 17639 1 0 0 LNSLAIGLR LAAPLLKRLSLSTSKLNSLAIGLRQIAASS SLSTSKLNSLAIGLRQIAASSQDSVGRVLR K L N L R Q 1 1 1 0 0 0 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 9 0 955.58147 P54886 P54886 433 441 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 5.3462E-07 190.52 By MS/MS 5 0.816 1 1 1 3 17168000 17168000 0 8878 1048 9176 21987;21988;21989 17640;17641;17642 17641 3 220760 0 LNSNEAR AYPALVVEKMLKALKLNSNEARLKFPRLLQ EKMLKALKLNSNEARLKFPRLLQIIERYPE K L N A R L 1 1 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 802.39333 P78527 P78527 3456 3462 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.018465 113.41 By MS/MS 1.5 0.5 1 1 2 408390 408390 0 8879 1225 9177 21990;21991 17643 17643 1 134510 0 LNSNSGAGR DRLELGKPDNNDGSKLNSNSGAGRTSRPGR NNDGSKLNSNSGAGRTSRPGRTSDSPWFLS K L N G R T 1 1 2 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 874.42569 O95071 O95071 92 100 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0022978 117.53 By MS/MS 3 1.41 1 1 1 1 1 5 462070 462070 0 8880 384 9178 21992;21993;21994;21995;21996 17644 17644 1 47448 0 LNSNTQVVLLSATMPSDVLEVTK LSRGFKDQIYDIFQKLNSNTQVVLLSATMP LLSATMPSDVLEVTKKFMRDPIRILVKKEE K L N T K K 1 0 2 1 0 1 1 0 0 0 4 1 1 0 1 3 3 0 0 4 0 0 23 0 2458.2989 P60842 P60842 203 225 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 2.9573E-14 228.49 By MS/MS 6.25 0.433 3 1 4 10867000 10867000 0 8881 1097 9179;9180 21997;21998;21999;22000 17645;17646;17647 17645 625 3 75414 0 LNSNTQVVLLSATMPSDVLEVTKK LSRGFKDQIYDIFQKLNSNTQVVLLSATMP LSATMPSDVLEVTKKFMRDPIRILVKKEEL K L N K K F 1 0 2 1 0 1 1 0 0 0 4 2 1 0 1 3 3 0 0 4 0 0 24 1 2586.3939 P60842 P60842 203 226 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 3 2.2219E-08 163.41 By MS/MS 6.33 0.471 2 1 3 17620000 17620000 0 8882 1097 9181;9182 22001;22002;22003 17648;17649 17648 625 2 122870 0 LNSSDPSLIGLK ANALTKYMRDPTFVRLNSSDPSLIGLKQYY FVRLNSSDPSLIGLKQYYKVVNSYPLAHKV R L N L K Q 0 0 1 1 0 0 0 1 0 1 3 1 0 0 1 3 0 0 0 0 0 0 12 0 1242.682 Q9UHI6 Q9UHI6 266 277 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 2 3.3686E-05 172.56 By MS/MS 4 0 1 1 1072600 1072600 0 8883 2731 9183 22004 17650 17650 1 100940 0 LNSSVQLAGLR KVYMNQVCDDTITSRLNSSVQLAGLRLLTN ITSRLNSSVQLAGLRLLTNMTVTNEYQHML R L N L R L 1 1 1 0 0 1 0 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1156.6564 Q9UH62 Q9UH62 216 226 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 0.00025571 138.25 By MS/MS 7 0 1 1 838250 838250 0 8884 2725 9184 22005 17651 17651 1 13159 0 LNSVLEVEK LLDEISLADDSVLERLNSVLEVEKSLVLAE DSVLERLNSVLEVEKSLVLAEKGSPEDKDS R L N E K S 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 1029.5706 Q9NU22 Q9NU22 1481 1489 MDN1 Midasin yes yes 2 0.021746 88.177 By MS/MS 2.5 1.12 1 1 1 1 4 1242400 1242400 0 8885 2580 9185 22006;22007;22008;22009 17652 17652 1 246150 0 LNSVQSSER LRSLLVNPEGPTLMRLNSVQSSERPLFLVH GPTLMRLNSVQSSERPLFLVHPIEGSTTVF R L N E R P 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 1018.5043 P49327 P49327 2234 2242 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.3209E-05 178.55 By MS/MS 1.5 0.5 1 1 2 438830 438830 0 8886 946 9186 22010;22011 17653 17653 1 142310 0 LNVCVSK RAITHLNNNFMFGQKLNVCVSKQPAIMPGQ NNFMFGQKLNVCVSKQPAIMPGQSYGLEDG K L N S K Q 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 7 0 818.43202 P14866;Q8WVV9 P14866 449 455 HNRNPL;HNRNPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like yes no 2 0.014876 122.74 By MS/MS 5.5 0.5 1 1 2 1276500 1276500 0 8887 619 9187 22012;22013 17654 17654 1 9860.6 0 LNVEEGLYSR WKRQNITNQLEKWMKLNVEEGLYSRTLAGS EKWMKLNVEEGLYSRTLAGSITTPPLLIVF K L N S R T 0 1 1 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1178.5932 Q68CQ7 Q68CQ7 268 277 GLT8D1 Glycosyltransferase 8 domain-containing protein 1 yes yes 2 0.00075537 128.35 By MS/MS By matching 7 0 2 1 1 1239400 1196700 42670 8888 1671 9188 22014;22015 17655 17655 1 18786 76847 LNVSHNK TSLPSAIRELENLQKLNVSHNKLKILPEEI RELENLQKLNVSHNKLKILPEEITNLRNLK K L N N K L 0 0 2 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 810.4348 Q9H9A6 Q9H9A6 133 139 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.025527 108.09 By MS/MS 4.5 0.5 1 1 2 514140 514140 0 8889 2484 9189 22016;22017 17656 17656 1 22467 0 LNVWDLSK PHNETILASSGTDRRLNVWDLSKIGEEQSP SSGTDRRLNVWDLSKIGEEQSPEDAEDGPP R L N S K I 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 8 0 973.52328 Q09028;Q16576 Q09028 342 349 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.023252 96.034 By MS/MS 6.5 0.5 1 1 2 1730400 1730400 0 8890 1318;1553 9190 22018;22019 17657 17657 1 12783 0 LNYGIPAIVK TSRHPEAEMAQNSVRLNYGIPAIVKLLNQP QNSVRLNYGIPAIVKLLNQPNQWPLVKATI R L N V K L 1 0 1 0 0 0 0 1 0 2 1 1 0 0 1 0 0 0 1 1 0 0 10 0 1086.6437 P14923 P14923 478 487 JUP Junction plakoglobin yes yes 2 0.010544 111.74 By matching By MS/MS 4 0.816 1 1 1 2 1 1850100 1062300 787830 8891 621 9191 22020;22021;22022 17658 17658 1 62186 100280 LPAAGVGDMVMATVK LYIISVKGIKGRLNRLPAAGVGDMVMATVK LPAAGVGDMVMATVKKGKPELRKKVHPAVV R L P V K K 3 0 0 1 0 0 0 2 0 0 1 1 2 0 1 0 1 0 0 3 0 0 15 0 1458.7575 P62829 P62829 52 66 RPL23 60S ribosomal protein L23 yes yes 2 0.00061848 118.61 By MS/MS 10 0 4 4 6476000 6476000 0 8892 1173 9192;9193;9194 22023;22024;22025;22026 17659;17660;17661;17662 17659 672;673 4 349030 0 LPAAGVGDMVMATVKK LYIISVKGIKGRLNRLPAAGVGDMVMATVK PAAGVGDMVMATVKKGKPELRKKVHPAVVI R L P K K G 3 0 0 1 0 0 0 2 0 0 1 2 2 0 1 0 1 0 0 3 0 0 16 1 1586.8524 P62829 P62829 52 67 RPL23 60S ribosomal protein L23 yes yes 3 0.008665 78.486 By MS/MS 10 0 1 1 466950 466950 0 8893 1173 9195 22027 17663 17663 672;673 1 25167 0 LPADQRR TPAEVALIRMTADGRLPADQRRGYKNVFNA IRMTADGRLPADQRRGYKNVFNALIRITRE R L P R R G 1 2 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 7 1 854.47225 Q02978 Q02978 153 159 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.049252 123.99 By MS/MS 8.5 1.12 1 1 1 1 4 20560000 20560000 0 8894 1284 9196 22028;22029;22030;22031 17664 17664 1 333680 0 LPADTCLLEFAR TFEDCQLALAEGQLRLPADTCLLEFARLVR QLRLPADTCLLEFARLVRGLGLKPEKLEKD R L P A R L 2 1 0 1 1 0 1 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 12 0 1404.7071 Q8NF37 Q8NF37 325 336 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 6.8545E-06 181.87 By MS/MS 7 0.816 1 1 1 3 7979100 7979100 0 8895 1963 9197 22032;22033;22034 17665 17665 1 56660 0 LPCAVLR GLAVFALLDVWYLVRLPCAVLRARLLQPRV LDVWYLVRLPCAVLRARLLQPRVRDLLAEQ R L P L R A 1 1 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 7 0 827.46874 Q8WUY1 Q8WUY1 27 33 THEM6 Protein THEM6 yes yes 2 0.029073 105.42 By MS/MS 9 0 1 1 1714700 1714700 0 8896 2019 9198 22035 17666 17666 1 33746 0 LPCIFICENNR QGQIFEAYNMAALWKLPCIFICENNRYGMG ALWKLPCIFICENNRYGMGTSVERAAASTD K L P N R Y 0 1 2 0 2 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 11 0 1434.6748 P08559 P08559 216 226 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.017631 86.882 By MS/MS 7.5 0.5 1 1 2 5084700 5084700 0 8897 524 9199 22036;22037 17667;17668 17667 2 78538 0 LPDDDPTAVAGSFSCTMK SLPYNQPGICYTLVRLPDDDPTAVAGSFSC DDPTAVAGSFSCTMKFTVRDCDPNTGVPDE R L P M K F 2 0 0 3 1 0 0 1 0 0 1 1 1 1 2 2 2 0 0 1 0 0 18 0 1910.839 Q9UBF2 Q9UBF2 709 726 COPG2 Coatomer subunit gamma-2 yes yes 2 2.8813E-07 214.48 By MS/MS 4 0 1 1 1044200 1044200 0 8898 2697 9200 22038 17669 17669 1 98263 0 LPDGSSFTNQFPSDAPLEEAR SYARERSTVARIQFRLPDGSSFTNQFPSDA FTNQFPSDAPLEEARQFAAQTVGNTYGNFS R L P A R Q 2 1 1 2 0 1 2 1 0 0 2 0 0 2 3 3 1 0 0 0 0 0 21 0 2277.055 Q92575 Q92575 326 346 UBXN4 UBX domain-containing protein 4 yes yes 2 1.2986E-05 128.74 By MS/MS 5.5 0.5 1 1 2 2478400 2478400 0 8899 2058 9201 22039;22040 17670 17670 1 19988 0 LPDGTSLTQTFR PPTKREYDQCRIQVRLPDGTSLTQTFRARE QVRLPDGTSLTQTFRAREQLAAVRLYVELH R L P F R A 0 1 0 1 0 1 0 1 0 0 2 0 0 1 1 1 3 0 0 0 0 0 12 0 1334.683 Q04323 Q04323 220 231 UBXN1 UBX domain-containing protein 1 yes yes 2 3.4786E-05 172.21 By MS/MS 7 0 1 1 7858200 7858200 0 8900 1289 9202 22041 17671 17671 1 123360 0 LPDINIYQLK VLAMCQAIISSNSERLPDINIYQLKVLDCA SNSERLPDINIYQLKVLDCAMDACINLGLL R L P L K V 0 0 1 1 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1215.6863 Q9H7B4 Q9H7B4 320 329 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 2 0.00061278 131.11 By MS/MS 7 0 1 1 448530 448530 0 8901 2460 9203 22042 17672 17672 1 7041.2 0 LPDLKDAEAVQK RKKQKLAKERAGLSKLPDLKDAEAVQKFFL LSKLPDLKDAEAVQKFFLEEIQLGEELLAQ K L P Q K F 2 0 0 2 0 1 1 0 0 0 2 2 0 0 1 0 0 0 0 1 0 0 12 1 1325.7191 Q15388 Q15388 57 68 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.00034473 149.94 By MS/MS 10 0 1 1 1724900 1724900 0 8902 1506 9204 22043 17673;17674 17674 2 92964 0 LPDLSPVENK QRQKQPRAGPIKAQKLPDLSPVENKEHKPG IKAQKLPDLSPVENKEHKPGPIGKERSLKN K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 Q9Y520 Q9Y520 2101 2110 PRRC2C Protein PRRC2C yes yes 2 0.034171 79.974 By MS/MS 2 0.816 1 1 1 3 601630 601630 0 8903 2905 9205 22044;22045;22046 17675 17675 1 138380 0 LPDVYGVFQFK TFLKKKGGKYSVQFKLPDVYGVFQFKVDYN VQFKLPDVYGVFQFKVDYNRLGYTHLYSST K L P F K V 0 0 0 1 0 1 0 1 0 0 1 1 0 2 1 0 0 0 1 2 0 0 11 0 1311.6863 P39656 P39656 381 391 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.0005069 148.69 By MS/MS 6 0 1 1 943660 943660 0 8904 855 9206 22047 17676 17676 1 6487 0 LPEAAFLAR GKVDACLELLIRTGRLPEAAFLARTYLPSQ LIRTGRLPEAAFLARTYLPSQVSRVVKLWR R L P A R T 3 1 0 0 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 986.55492 P35606 P35606 751 759 COPB2 Coatomer subunit beta yes yes 2 0.0016847 125.31 By MS/MS 2.5 1.12 1 1 1 1 4 2979900 2979900 0 8905 826 9207 22048;22049;22050;22051 17677;17678;17679;17680 17677 4 587410 0 LPEASQSPLVLK LPINSAAIKAECTARLPEASQSPLVLKQAV TARLPEASQSPLVLKQAVRKPLEAVLRYLE R L P L K Q 1 0 0 0 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 1 0 0 12 0 1280.734 Q13330 Q13330 516 527 MTA1 Metastasis-associated protein MTA1 yes yes 2 0.00092827 144.55 By MS/MS 4.5 0.5 1 1 2 2631100 2631100 0 8906 1371 9208 22052;22053 17681;17682;17683 17683 3 81656 0 LPECGSGDGSLQPPR ESVSEVVVNRVDVARLPECGSGDGSLQPPR LPECGSGDGSLQPPRKVQMGAKDATPVPCG R L P P R K 0 1 0 1 1 1 1 3 0 0 2 0 0 0 3 2 0 0 0 0 0 0 15 0 1568.7253 O00411 O00411 91 105 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00056759 160.56 By MS/MS 3 0 1 1 3167500 3167500 0 8907 104 9209 22054 17684 17684 1 57956 0 LPEDPLLSGLLDSPALK LQLELAQVLAQERPKLPEDPLLSGLLDSPA EDPLLSGLLDSPALKACLDTAVENMPSLKM K L P L K A 1 0 0 2 0 0 1 1 0 0 6 1 0 0 3 2 0 0 0 0 0 0 17 0 1776.9873 P49327 P49327 1209 1225 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00036679 169.58 By MS/MS 6 0 1 1 126810 126810 0 8908 946 9210 22055 17685;17686;17687 17686 3 871.75 0 LPEEPITR FFKNLGVVVAPHTLKLPEEPITRWGEYWCE VAPHTLKLPEEPITRWGEYWCEVTVNGLDT K L P T R W 0 1 0 0 0 0 2 0 0 1 1 0 0 0 2 0 1 0 0 0 0 0 8 0 953.5182 Q9BYD2 Q9BYD2 208 215 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.022839 96.492 By MS/MS By matching 8.33 0.471 2 1 2 1 5479900 5426800 53129 8909 2369 9211 22056;22057;22058 17688 17688 1 69176 71695 LPEFSFEK FFLNPARKTRPQAPRLPEFSFEKRQVVEGS TRPQAPRLPEFSFEKRQVVEGSSSVGPLPS R L P E K R 0 0 0 0 0 0 2 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 8 0 995.4964 Q9C0E8 Q9C0E8 317 324 LNP Protein lunapark yes yes 2 0.021068 98.458 By MS/MS 6.5 0.5 1 1 2 1183300 1183300 0 8910 2394 9212 22059;22060 17689 17689 1 9846.7 0 LPEFYDETLLR LERLPTASTCMNLLKLPEFYDETLLRSKLL NLLKLPEFYDETLLRSKLLYAIECAAGFEL K L P L R S 0 1 0 1 0 0 2 0 0 0 3 0 0 1 1 0 1 0 1 0 0 0 11 0 1394.7082 Q15386 Q15386 1057 1067 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.00010068 151.83 By MS/MS 4 0 1 1 403530 403530 0 8911 1505 9213 22061 17690 17690 1 37975 0 LPEGDLGK LSLLQDSGEVREDLRLPEGDLGKEIEQKYD EVREDLRLPEGDLGKEIEQKYDCGEEILIT R L P G K E 0 0 0 1 0 0 1 2 0 0 2 1 0 0 1 0 0 0 0 0 0 0 8 0 827.43888 P63241;Q6IS14 P63241 114 121 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 2 0.030237 101.33 By MS/MS 10 0 1 1 0 0 0 8912 1201 9214 22062 17691 17691 1 0 0 LPEGDLGKEIEQK LSLLQDSGEVREDLRLPEGDLGKEIEQKYD LRLPEGDLGKEIEQKYDCGEEILITVLSAM R L P Q K Y 0 0 0 1 0 1 3 2 0 1 2 2 0 0 1 0 0 0 0 0 0 0 13 1 1454.7617 P63241;Q6IS14 P63241 114 126 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 2;3 2.5483E-05 199.8 By MS/MS 9.67 0.471 1 2 3 2576000 2576000 0 8913 1201 9215 22063;22064;22065 17692;17693;17694 17694 3 130120 0 LPELFETGR ______________________________ ELQLPRLPELFETGRQLLDEVEVATEPAGS R L P G R Q 0 1 0 0 0 0 2 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 9 0 1060.5553 P78318 P78318 12 20 IGBP1 Immunoglobulin-binding protein 1 yes yes 2 0.012151 96.668 By MS/MS 7 0 1 1 413280 413280 0 8914 1218 9216 22066 17695 17695 1 6487.8 0 LPETNLFETEETR RINMVEELEKALGMKLPETNLFETEETRKI MKLPETNLFETEETRKILDDICVAKAVECP K L P T R K 0 1 1 0 0 0 4 0 0 0 2 0 0 1 1 0 3 0 0 0 0 0 13 0 1577.7573 Q15046 Q15046 408 420 KARS Lysine--tRNA ligase yes yes 2 2.299E-07 228.12 By MS/MS 5 0 1 1 1993500 1993500 0 8915 1481 9217 22067 17696 17696 1 19994 0 LPETNLFETEETRK RINMVEELEKALGMKLPETNLFETEETRKI KLPETNLFETEETRKILDDICVAKAVECPP K L P R K I 0 1 1 0 0 0 4 0 0 0 2 1 0 1 1 0 3 0 0 0 0 0 14 1 1705.8523 Q15046 Q15046 408 421 KARS Lysine--tRNA ligase yes yes 3 0.022271 76.759 By MS/MS 5 0 1 1 3261100 3261100 0 8916 1481 9218 22068 17697 17697 1 32707 0 LPETVHTAVR ENNPTLVEVLEGVVRLPETVHTAVRYTSIE EGVVRLPETVHTAVRYTSIELVGEMSEVVD R L P V R Y 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 2 0 0 2 0 0 10 0 1121.6193 Q9Y5L0 Q9Y5L0 469 478 TNPO3 Transportin-3 yes yes 2 0.026564 83.647 By MS/MS 4.5 0.5 1 1 2 1550100 1550100 0 8917 2915 9219 22069;22070 17698 17698 1 135120 0 LPEVIALK ILVEGIYSMEGSIVRLPEVIALKKKYKAYL MEGSIVRLPEVIALKKKYKAYLYLDEAHSI R L P L K K 1 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 881.5586 O15270 O15270 327 334 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.039514 86.472 By MS/MS 6.5 0.5 1 1 2 1784300 1784300 0 8918 178 9220 22071;22072 17699 17699 1 13199 0 LPEVQGVSR RRLYPLAIQICEYLRLPEVQGVSRILAHWA ICEYLRLPEVQGVSRILAHWACYKVQQKDV R L P S R I 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 983.53999 Q9H269 Q9H269 475 483 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 0.050678 75.652 By MS/MS 4 0 1 1 350030 350030 0 8919 2427 9221 22073 17700 17700 1 32940 0 LPEYPQVDDLLLR ASPSTAGETPSGVKRLPEYPQVDDLLLRRL KRLPEYPQVDDLLLRRLVKKPERQQVPTRK R L P L R R 0 1 0 2 0 1 1 0 0 0 4 0 0 0 2 0 0 0 1 1 0 0 13 0 1569.8403 Q9UI10 Q9UI10 144 156 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 2 0.0049374 91.62 By MS/MS 6 0 1 1 505230 505230 0 8920 2734 9222 22074 17701;17702 17702 2 3473.1 0 LPFPIIDDR SKDINAYNCEEPTEKLPFPIIDDRNRELAI EEPTEKLPFPIIDDRNRELAILLGMLDPAE K L P D R N 0 1 0 2 0 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 9 0 1084.5917 P30041 P30041 98 106 PRDX6 Peroxiredoxin-6 yes yes 2 0.0095404 101.25 By MS/MS 8 0 1 1 302870 302870 0 8921 762 9223 22075 17703;17704 17704 2 3823.7 0 LPGAEEAPVR ______________________________ LEAQRLPGAEEAPVRVALRVRPLLPKELLH R L P V R V 2 1 0 0 0 0 2 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 10 0 1037.5506 Q2M1P5 Q2M1P5 8 17 KIF7 Kinesin-like protein KIF7 yes yes 2 0.0094802 95.502 By MS/MS 3 0 1 1 317210 317210 0 8922 1566 9224 22076 17705 17705 1 5804.1 0 LPGDKGLVLMSR KYDGKWEVEEMKESKLPGDKGLVLMSRAKH ESKLPGDKGLVLMSRAKHHAISAKLNKPFL K L P S R A 0 1 0 1 0 0 0 2 0 0 3 1 1 0 1 1 0 0 0 1 0 0 12 1 1284.7224 P27824 P27824 114 125 CANX Calnexin yes yes 3 0.033787 73.466 By MS/MS 4 0 1 1 1058000 1058000 0 8923 747 9225 22077 17706 17706 376 1 99566 0 LPGELEPVQATQNK ELAEQLGLSTGEKEKLPGELEPVQATQNKT KLPGELEPVQATQNKTGKYVPPSLRDGASR K L P N K T 1 0 1 0 0 2 2 1 0 0 2 1 0 0 2 0 1 0 0 1 0 0 14 0 1522.7991 O75821 O75821 196 209 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 6.5383E-08 225.55 By MS/MS By MS/MS 7.86 1.25 1 2 2 1 1 5 2 80680000 80311000 369340 8924 348 9226 22078;22079;22080;22081;22082;22083;22084 17707;17708;17709;17710;17711;17712;17713;17714;17715 17714 9 1248700 631400 LPGELEPVQATQNKTGK ELAEQLGLSTGEKEKLPGELEPVQATQNKT GELEPVQATQNKTGKYVPPSLRDGASRRGE K L P G K Y 1 0 1 0 0 2 2 2 0 0 2 2 0 0 2 0 2 0 0 1 0 0 17 1 1808.9632 O75821 O75821 196 212 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.00046453 122.12 By MS/MS 7 0 1 1 3855600 3855600 0 8925 348 9227 22085 17716 17716 1 60525 0 LPGEQAEAAVEK L P E K 3 0 0 0 0 1 3 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1240.6299 REV__Q9H489 yes yes 3 0.0041406 87.713 By MS/MS 5.75 0.829 2 1 1 4 9796800 9796800 0 + 8926 2985 9228 22086;22087;22088;22089 17717;17718 17717 2 94789 0 LPHFQLSR LLANALTSALRLHQRLPHFQLSRAFLAQAL ALRLHQRLPHFQLSRAFLAQALLEDSCHYL R L P S R A 0 1 0 0 0 1 0 0 1 0 2 0 0 1 1 1 0 0 0 0 0 0 8 0 996.5505 P57088 P57088 74 81 TMEM33 Transmembrane protein 33 yes yes 3 0.037251 95.815 By MS/MS 8.5 0.5 1 1 2 4984400 4984400 0 8927 1078 9229 22090;22091 17719;17720 17720 2 85441 0 LPIGDVATQYFADR LEKIHHSGAKVVLSKLPIGDVATQYFADRD KLPIGDVATQYFADRDMFCAGRVPEEDLKR K L P D R D 2 1 0 2 0 1 0 1 0 1 1 0 0 1 1 0 1 0 1 1 0 0 14 0 1564.7886 Q99832 Q99832 293 306 CCT7 T-complex protein 1 subunit eta yes yes 2 1.7917E-07 216.84 By MS/MS 6.5 1.12 1 1 1 1 4 29374000 29374000 0 8928 2270 9230 22092;22093;22094;22095 17721;17722;17723 17721 3 209470 0 LPIVNEDDELVAIIAR LKEANEILQRSKKGKLPIVNEDDELVAIIA PIVNEDDELVAIIARTDLKKNRDYPLASKD K L P A R T 2 1 1 2 0 0 2 0 0 3 2 0 0 0 1 0 0 0 0 2 0 0 16 0 1778.9778 P12268 P12268 209 224 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.00047954 164.22 By MS/MS 6 0 1 1 305810 305810 0 8929 590 9231 22096 17724 17724 1 2102.2 0 LPKDDVHAK KKMGYYKILDVMYSRLPKDDVHAKESKINQ DVMYSRLPKDDVHAKESKINQVFHGSCITE R L P A K E 1 0 0 2 0 0 0 0 1 0 1 2 0 0 1 0 0 0 0 1 0 0 9 1 1021.5556 P78527 P78527 1884 1892 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0068444 99.013 By MS/MS 1.5 0.5 2 2 4 1313900 1313900 0 8930 1225 9232 22097;22098;22099;22100 17725;17726;17727;17728 17727 4 404970 0 LPKDFYDKIEAK IDAYELLEAVEILSKLPKDFYDKIEAKKWQ LSKLPKDFYDKIEAKKWQERKEALESVEVL K L P A K K 1 0 0 2 0 0 1 0 0 1 1 3 0 1 1 0 0 0 1 0 0 0 12 2 1465.7817 Q14008 Q14008 280 291 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.0059558 97.779 By MS/MS 2 0 1 1 960620 960620 0 8931 1417 9233 22101 17729 17729 1 324920 0 LPLFDSVR DVLQGYQWLLRDLPRLPLFDSVRSTTALAL LLRDLPRLPLFDSVRSTTALALQQAIHMET R L P V R S 0 1 0 1 0 0 0 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 8 0 945.52837 Q8N201 Q8N201 1036 1043 INTS1 Integrator complex subunit 1 yes yes 2 0.027017 89.142 By MS/MS 2.5 0.5 1 1 2 595620 595620 0 8932 1907 9234 22102;22103 17730 17730 1 173690 0 LPLFGLGR ADVRRESRLLQLLGRLPLFGLGRLVTRKSW LLQLLGRLPLFGLGRLVTRKSWLWQHDEPC R L P G R L 0 1 0 0 0 0 0 2 0 0 3 0 0 1 1 0 0 0 0 0 0 0 8 0 871.52797 P82930 P82930 71 78 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.006354 119.22 By MS/MS 9 0.816 1 1 1 3 6819700 6819700 0 8933 1237 9235 22104;22105;22106 17731;17732 17731 2 91727 0 LPLHTLTSSTPVVLVR CCKYQVEYDAYKLSRLPLHTLTSSTPVVLV PLHTLTSSTPVVLVRKDDLHRKRLHNTIAL R L P V R K 0 1 0 0 0 0 0 0 1 0 4 0 0 0 2 2 3 0 0 3 0 0 16 0 1732.0247 P17152 P17152 146 161 TMEM11 Transmembrane protein 11, mitochondrial yes yes 3 0.024958 76.311 By MS/MS 9 0 1 1 260830 260830 0 8934 640 9236 22107 17733 17733 1 5133.1 0 LPLLLSCCCGDDESVR SQDGDTAACSLIQARLPLLLSCCCGDDESV PLLLSCCCGDDESVRKVTEHLSGCIQQWGD R L P V R K 0 1 0 2 3 0 1 1 0 0 4 0 0 0 1 2 0 0 0 1 0 0 16 0 1892.8431 Q8N201 Q8N201 1762 1777 INTS1 Integrator complex subunit 1 yes yes 2 0.004331 103.88 By MS/MS 2 0 1 1 51808 51808 0 8935 1907 9237 22108 17734 17734 1 17524 0 LPLLPPESPGPLR EDDYSPRERRGGGLRLPLLPPESPGPLRQR LRLPLLPPESPGPLRQRHVACLARSERGLG R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 Q14160 Q14160 846 858 SCRIB Protein scribble homolog yes yes 2 0.010627 90.149 By MS/MS 2 0 1 1 137510 137510 0 8936 1425 9238 22109 17735 17735 1 46510 0 LPLQDVYK DCILPPTRPTDKPLRLPLQDVYKIGGIGTV PTDKPLRLPLQDVYKIGGIGTVPVGRVETG R L P Y K I 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 8 0 974.54368 Q5VTE0;P68104;Q05639 Q5VTE0 248 255 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.042956 85.161 By MS/MS 7 0 1 1 16856000 16856000 0 8937 1209 9239 22110 17736 17736 1 264610 0 LPLQLDDAVRPEAEGEEEGR LHVQKIYVISLAEPRLPLQLDDAVRPEAEG DDAVRPEAEGEEEGRATVNQDTRLDNRVID R L P G R A 2 2 0 2 0 1 5 2 0 0 3 0 0 0 2 0 0 0 0 1 0 0 20 1 2222.0815 P14868 P14868 152 171 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2;3 5.848E-06 161.49 By MS/MS 4.4 2.42 1 1 2 1 5 19480000 19480000 0 8938 620 9240 22111;22112;22113;22114;22115 17737;17738;17739 17738 3 290140 0 LPLSGLAESVGMTR PAKPNSTPVGPSSSKLPLSGLAESVGMTRN KLPLSGLAESVGMTRNGDLGAMKHSPGLSR K L P T R N 1 1 0 0 0 0 1 2 0 0 3 0 1 0 1 2 1 0 0 1 0 0 14 0 1429.7599 Q6P2H3 Q6P2H3 118 131 CEP85 Centrosomal protein of 85 kDa yes yes 2 0.023638 89.9 By MS/MS 4 0 1 1 190800 190800 0 8939 1705 9241 22116 17740 17740 910 0 17955 0 LPLVNSYTR FLTPLLRNIIISLARLPLVNSYTRVPPLVW IISLARLPLVNSYTRVPPLVWKLGWSPKPG R L P T R V 0 1 1 0 0 0 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 9 0 1061.5869 P42858 P42858 2402 2410 HTT Huntingtin yes yes 2 0.050212 75.854 By MS/MS 1 0 1 1 156540 156540 0 8940 890 9242 22117 17741 17741 1 37720 0 LPNFGFVVFDDSEPVQK SYGNVVELRINSGGKLPNFGFVVFDDSEPV NFGFVVFDDSEPVQKVLSNRPIMFRGEVRL K L P Q K V 0 0 1 2 0 1 1 1 0 0 1 1 0 3 2 1 0 0 0 3 0 0 17 0 1936.9571 Q13283 Q13283 377 393 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.0002947 179.46 By MS/MS 5 0 1 1 56168 56168 0 8941 1368 9243 22118 17742 17742 1 563.33 0 LPNFGFVVFDDSEPVQR NVVELRINTKGVGGKLPNFGFVVFDDSEPV NFGFVVFDDSEPVQRILIAKPIMFRGEVRL K L P Q R I 0 1 1 2 0 1 1 1 0 0 1 0 0 3 2 1 0 0 0 3 0 0 17 0 1964.9632 Q9UN86 Q9UN86 371 387 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 2 0.00025036 163.62 By MS/MS 6 0 1 1 164030 164030 0 8942 2785 9244 22119 17743;17744 17744 2 1127.6 0 LPNFLSVEPR PKVNTDLGNDLYFVKLPNFLSVEPRPFDPQ LYFVKLPNFLSVEPRPFDPQYYEDEFEDEE K L P P R P 0 1 1 0 0 0 1 0 0 0 2 0 0 1 2 1 0 0 0 1 0 0 10 0 1170.6397 Q8WVC0 Q8WVC0 378 387 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.049354 72.643 By MS/MS 4 0 1 1 109980 109980 0 8943 2023 9245 22120 17745 17745 1 10350 0 LPPKSEVSSDEDIQFR KDLNSDMDSILASLKLPPKSEVSSDEDIQF PPKSEVSSDEDIQFRLVTRFVNEAVMCLQE K L P F R L 0 1 0 2 0 1 2 0 0 1 1 1 0 1 2 3 0 0 0 1 0 0 16 1 1845.9109 P40939 P40939 661 676 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.0087504 87.138 By MS/MS 5 0 1 1 1111800 1111800 0 8944 865 9246 22121 17746 17746 1 11151 0 LPPNTNDEVDEDPTGNK TVAGADKFGNICVVRLPPNTNDEVDEDPTG PNTNDEVDEDPTGNKALWDRGLLNGASQKA R L P N K A 0 0 3 3 0 0 2 1 0 0 1 1 0 0 3 0 2 0 0 1 0 0 17 0 1853.8279 Q15393 Q15393 1058 1074 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0013493 119.88 By MS/MS 1 0 1 1 0 0 0 8945 1508 9247 22122 17747 17747 1 0 0 LPPTPLLLFPEEEATNGR GELVESLKRFCASTRLPPTPLLLFPEEEAT TPLLLFPEEEATNGREGLLRFSSWPFSIQD R L P G R E 1 1 1 0 0 0 3 1 0 0 4 0 0 1 4 0 2 0 0 0 0 0 18 0 1993.052 Q9Y679 Q9Y679 151 168 AUP1 Ancient ubiquitous protein 1 yes yes 2;3 0.00020347 154.1 By MS/MS 6.67 0.471 1 2 3 808050 808050 0 8946 2934 9248 22123;22124;22125 17748;17749;17750;17751 17750 4 11237 0 LPPVLAIQLK CNKKVDTVKRLLIKKLPPVLAIQLKRFDYD LLIKKLPPVLAIQLKRFDYDWERECAIKFN K L P L K R 1 0 0 0 0 1 0 0 0 1 3 1 0 0 2 0 0 0 0 1 0 0 10 0 1090.7114 Q93008 Q93008 1789 1798 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0079274 98.997 By MS/MS 2 0 1 1 579430 579430 0 8947 2085 9249 22126 17752 17752 1 195990 0 LPQLPITNFSR KQTPKQRLLGWIQNKLPQLPITNFSRDWQS IQNKLPQLPITNFSRDWQSGRALGALVDSC K L P S R D 0 1 1 0 0 1 0 0 0 1 2 0 0 1 2 1 1 0 0 0 0 0 11 0 1284.719 P21333 P21333 180 190 FLNA Filamin-A yes yes 2 0.04592 72.096 By MS/MS 2 0 1 1 155900 155900 0 8948 677 9250 22127 17753 17753 1 52733 0 LPQPEEGATYEGIQKK MVQAVRLIAEGKAPRLPQPEEGATYEGIQK PQPEEGATYEGIQKKETAKINWDQPAEAIH R L P K K E 1 0 0 0 0 2 3 2 0 1 1 2 0 0 2 0 1 0 1 0 0 0 16 1 1786.9101 O75891 O75891 191 206 ALDH1L1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 3 0.0067668 89.911 By MS/MS 4.5 0.5 1 1 2 2198300 2198300 0 8949 353 9251 22128;22129 17754 17754 1 181800 0 LPQTSDDEK IIDGVKVQVHTRRPKLPQTSDDEKKDF___ HTRRPKLPQTSDDEKKDF____________ K L P E K K 0 0 0 2 0 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 0 1031.4771 Q9GZT3 Q9GZT3 98 106 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.00081181 137.13 By MS/MS 10 0 1 1 2831700 2831700 0 8950 2398 9252 22130 17755 17755 1 152620 0 LPQTSDDEKK IIDGVKVQVHTRRPKLPQTSDDEKKDF___ TRRPKLPQTSDDEKKDF_____________ K L P K K D 0 0 0 2 0 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 10 1 1159.5721 Q9GZT3 Q9GZT3 98 107 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 0.00065409 147.73 By MS/MS 10 0 2 2 1169300 1169300 0 8951 2398 9253 22131;22132 17756;17757 17757 2 63022 0 LPQTSDDEKKDF IIDGVKVQVHTRRPKLPQTSDDEKKDF___ RPKLPQTSDDEKKDF_______________ K L P D F - 0 0 0 3 0 1 1 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 12 2 1421.6674 Q9GZT3 Q9GZT3 98 109 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.0084688 123.01 By MS/MS 10 0 1 1 2311800 2311800 0 8952 2398 9254 22133 17758 17758 1 124600 0 LPREPSNPER SIKEFFRGLNISAVRLPREPSNPERLKGFG ISAVRLPREPSNPERLKGFGYAEFEDLDSL R L P E R L 0 2 1 0 0 0 2 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 10 1 1193.6153 P23588 P23588 126 135 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.0043323 118.71 By MS/MS By matching 5 0 2 1 1 5017900 4683400 334540 8953 708 9255 22134;22135 17759 17759 1 46972 280940 LPRPPPPEMPESLK ALQWFIYDSVKVYFRLPRPPPPEMPESLKK RLPRPPPPEMPESLKKKLGLTQ________ R L P L K K 0 1 0 0 0 0 2 0 0 0 2 1 1 0 6 1 0 0 0 0 0 0 14 1 1586.849 Q00325 Q00325 342 355 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 3 0.020212 81.278 By MS/MS 1 0 1 1 182330 182330 0 8954 1259 9256 22136 17760 17760 753 1 43937 0 LPSAQTPNGTDYVASGK QTTSQSSKQPPPSIRLPSAQTPNGTDYVAS SAQTPNGTDYVASGKSIQTPQSHGTLTAEL R L P G K S 2 0 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 1 1 0 0 17 0 1704.8319 Q9Y520 Q9Y520 1960 1976 PRRC2C Protein PRRC2C yes yes 2 0.00048806 160.46 By MS/MS 1 0 1 1 354150 354150 0 8955 2905 9257 22137 17761;17762 17761 2 85339 0 LPSDVVTAVR NADKLGIILRNELMKLPSDVVTAVRGKGLL NELMKLPSDVVTAVRGKGLLNAIVIKETKD K L P V R G 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 3 0 0 10 0 1055.5975 P04181 P04181 363 372 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.0065632 102.07 By MS/MS 7 0 1 1 2809400 2809400 0 8956 470 9258 22138 17763 17763 1 44103 0 LPSGQYLQR HKLLAQGLIKGQTFRLPSGQYLQREEVDLT KGQTFRLPSGQYLQREEVDLTGSVPVHAKT R L P Q R E 0 1 0 0 0 2 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 9 0 1060.5665 Q15031 Q15031 606 614 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0058724 107.69 By MS/MS 4 0 1 1 5906000 5906000 0 8957 1477 9259 22139 17764 17764 1 555790 0 LPSNTLDR GLQLIIRNFWSHETRLPSNTLDRLLALNSL FWSHETRLPSNTLDRLLALNSLYSPKIEVH R L P D R L 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 8 0 914.48214 P78527 P78527 2531 2538 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.025598 93.429 By MS/MS 2.5 1.12 1 1 1 1 4 4280000 4280000 0 8958 1225 9260 22140;22141;22142;22143 17765;17766;17767 17765 3 1096000 0 LPSPLDITAER WLPISHAVLAMVCQKLPSPLDITAERVERL VCQKLPSPLDITAERVERLMCTGSQTFDSF K L P E R V 1 1 0 1 0 0 1 0 0 1 2 0 0 0 2 1 1 0 0 0 0 0 11 0 1210.6558 Q7Z2Z2 Q7Z2Z2 363 373 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 2 0.0096395 91.658 By MS/MS 3 0 1 1 197940 197940 0 8959 1780 9261 22144 17768 17768 1 3621.7 0 LPSRPGAQGVEPQNLR VQPSPAHVGQQGLSKLPSRPGAQGVEPQNL PSRPGAQGVEPQNLRTLQGHSVIRSATNTT K L P L R T 1 2 1 0 0 2 1 2 0 0 2 0 0 0 3 1 0 0 0 1 0 0 16 1 1717.9224 Q8WXI9 Q8WXI9 225 240 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.004089 97.2 By MS/MS 5 0 1 1 1606900 1606900 0 8960 2040 9262 22145 17769 17769 1 16116 0 LPSSIEYSDLSR HNGYYRSLYLLINSKLPSSIEYSDLSRVPI NSKLPSSIEYSDLSRVPIAKILLENVLKPL K L P S R V 0 1 0 1 0 0 1 0 0 1 2 0 0 0 1 4 0 0 1 0 0 0 12 0 1365.6776 Q15386 Q15386 219 230 UBE3C Ubiquitin-protein ligase E3C yes yes 2 3.0233E-05 173.64 By MS/MS 4 0 1 1 1568200 1568200 0 8961 1505 9263 22146 17770 17770 1 147580 0 LPTDASEDADQPAGDSAILLR SEPDLRDLLLFLAERLPTDASEDADQPAGD EDADQPAGDSAILLRAIGSQIRDQLALPWV R L P L R A 4 1 0 4 0 1 1 1 0 1 3 0 0 0 2 2 1 0 0 0 0 0 21 0 2154.0441 O60826 O60826 108 128 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 1.3188E-35 300.56 By MS/MS 5 0 1 1 1431400 1431400 0 8962 280 9264 22147 17771 17771 1 14356 0 LPTFGAPEQLVDLK KKSKKPPPVPALPSKLPTFGAPEQLVDLKQ KLPTFGAPEQLVDLKQAGLEAAAKATSSHP K L P L K Q 1 0 0 1 0 1 1 1 0 0 3 1 0 1 2 0 1 0 0 1 0 0 14 0 1526.8344 Q14258 Q14258 403 416 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.00039357 163.71 By MS/MS 5.5 0.5 1 1 2 1619300 1619300 0 8963 1437 9265 22148;22149 17772;17773 17772 2 14275 0 LPTISQR QQTLPPPVFQMLLTKLPTISQRIVSAQSLA VFQMLLTKLPTISQRIVSAQSLAEDDVE__ K L P Q R I 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 7 0 813.47085 Q15388 Q15388 126 132 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.025527 108.09 By MS/MS 10 0 1 1 1607800 1607800 0 8964 1506 9266 22150 17774 17774 1 86653 0 LPVEEAYKR QAATGFIVDPVSNLRLPVEEAYKRGLVGIE PVSNLRLPVEEAYKRGLVGIEFKEKLLSAE R L P K R G 1 1 0 0 0 0 2 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 9 1 1103.5975 P15924 P15924 2310 2318 DSP Desmoplakin yes yes 2 0.052483 91.069 By MS/MS 2.33 1.25 1 1 1 3 749450 749450 0 8965 628 9267 22151;22152;22153 17775 17775 1 123550 0 LPVGTTATLYFR DPKGKSLKDEDVLQKLPVGTTATLYFRDLG LQKLPVGTTATLYFRDLGAQISWVTVFLTE K L P F R D 1 1 0 0 0 0 0 1 0 0 2 0 0 1 1 0 3 0 1 1 0 0 12 0 1337.7343 Q9NZ01 Q9NZ01 68 79 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.00022408 148.91 By MS/MS 1 0 1 1 167840 167840 0 8966 2642 9268 22154 17776 17776 1 40444 0 LPVLAGCLK GELKTQMTSAVREPKLPVLAGCLKGLSSLL AVREPKLPVLAGCLKGLSSLLCNFTKSMEE K L P L K G 1 0 0 0 1 0 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 9 0 969.56812 P78527 P78527 217 225 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.022088 88.029 By MS/MS 3 1.41 1 1 1 1 1 5 4552900 4552900 0 8967 1225 9269 22155;22156;22157;22158;22159 17777;17778 17778 2 970220 0 LPVVVPLHSLDEK RDLIEFGMIPEFVGRLPVVVPLHSLDEKTL GRLPVVVPLHSLDEKTLVQILTEPRNAVIP R L P E K T 0 0 0 1 0 0 1 0 1 0 3 1 0 0 2 1 0 0 0 3 0 0 13 0 1444.829 O76031 O76031 500 512 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 0.0037987 105.25 By MS/MS 5.33 0.471 2 1 3 2618300 2618300 0 8968 360 9270 22160;22161;22162 17779;17780 17779 2 25692 0 LPYCQIATEK PPTLPRPAVAILSFKLPYCQIATEKGQMEE ILSFKLPYCQIATEKGQMEEQFWRSVIFHN K L P E K G 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 0 1221.6064 O75717 O75717 713 722 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.019865 86.882 By MS/MS 3 0 1 1 532730 532730 0 8969 342 9271 22163 17781 17781 1 9747.5 0 LQAAGNAVKR ACKVKADQDSEAMKRLQAAGNAVKRASDNL EAMKRLQAAGNAVKRASDNLVKAAQKAAAF R L Q K R A 3 1 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1026.5934 Q9Y490;Q9Y4G6 Q9Y490 2456 2465 TLN1;TLN2 Talin-1;Talin-2 no no 2 5.3766E-07 186.09 By MS/MS 2 0 1 1 228270 228270 0 8970 2888;2895 9272 22164 17782 17782 1 77211 0 LQAAVEK IDPENEELMLNISSRLQAAVEKLLEAISET LMLNISSRLQAAVEKLLEAISETSSQLEHA R L Q E K L 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 757.4334 Q99996 Q99996 1850 1856 AKAP9 A-kinase anchor protein 9 yes yes 2 0.018167 114.19 By MS/MS 3 0 1 1 343450 343450 0 8971 2276 9273 22165 17783 17783 1 6284.2 0 LQAEAQELLGYQVDPR ENWEKAQADKERRARLQAEAQELLGYQVDP QAEAQELLGYQVDPRSARFQELLQDLEKKE R L Q P R S 2 1 0 1 0 3 2 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 16 0 1828.9319 Q8TAE8 Q8TAE8 156 171 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.00014814 180.06 By MS/MS 9 0 1 1 347550 347550 0 8972 1974 9274 22166 17784;17785 17784 2 6839.9 0 LQAEAQQLR KELEVAEGGKAELERLQAEAQQLRKEERSW KAELERLQAEAQQLRKEERSWEQKLEEMRK R L Q L R K 2 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1055.5724 Q16543 Q16543 84 92 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 2 0.0022754 117.81 By MS/MS 7.5 1.12 1 1 1 1 4 7896400 7896400 0 8973 1551 9275 22167;22168;22169;22170 17786;17787;17788 17787 3 78672 0 LQAFSAAIESCNK LRLASHLNLAMCHLKLQAFSAAIESCNKAL LKLQAFSAAIESCNKALELDSNNEKGLFRR K L Q N K A 3 0 1 0 1 1 1 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1437.6922 Q02790 Q02790 332 344 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 1.4527E-05 211.63 By MS/MS 6 0 1 1 5227300 5227300 0 8974 1279 9276 22171 17789 17789 1 35934 0 LQAGEETASHYR VELARANRLCREAMRLQAGEETASHYRMAA AMRLQAGEETASHYRMAALEQCLSEP____ R L Q Y R M 2 1 0 0 0 1 2 1 1 0 1 0 0 0 0 1 1 0 1 0 0 0 12 0 1360.6371 Q9UBB6 Q9UBB6 707 718 NCDN Neurochondrin yes yes 2;3 1.1005E-05 178.46 By MS/MS 5 0 2 2 4963200 4963200 0 8975 2694 9277 22172;22173 17790;17791 17791 2 49779 0 LQAGEYVSLGK DGCLKIIDRKKDLVKLQAGEYVSLGKVEAA DLVKLQAGEYVSLGKVEAALKNLPLVDNIC K L Q G K V 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1163.6186 O95573;O60488 O95573 586 596 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 2 1.5516E-06 183.85 By MS/MS 2.75 1.48 1 1 1 1 4 6317600 6317600 0 8976 417;257 9278 22174;22175;22176;22177 17792;17793 17793 2 165730 0 LQAKKEEIIK RRSKTKEARKRREERLQAKKEEIIKTLSKE RREERLQAKKEEIIKTLSKEEETKK_____ R L Q I K T 1 0 0 0 0 1 2 0 0 2 1 3 0 0 0 0 0 0 0 0 0 0 10 2 1198.7285 P84098 P84098 177 186 RPL19 60S ribosomal protein L19 yes yes 3 0.006463 99.788 By MS/MS 8 0 1 1 1912700 1912700 0 8977 1247 9279 22178 17794 17794 1 24147 0 LQAPLTLLESSAR FGNTFEQPKVLPVIKLQAPLTLLESSARTI IKLQAPLTLLESSARTILHNRIPYGSHIIP K L Q A R T 2 1 0 0 0 1 1 0 0 0 4 0 0 0 1 2 1 0 0 0 0 0 13 0 1397.7878 Q96L50 Q96L50 317 329 LRR1 Leucine-rich repeat protein 1 yes yes 2 0.004335 92.781 By MS/MS 7 0 1 1 192470 192470 0 8978 2192 9280 22179 17795 17795 1 3021.5 0 LQAQNIQQR DSQTRNAPELDCLIRLQAQNIQQRHIVFLT LDCLIRLQAQNIQQRHIVFLTEKNIKMLSS R L Q Q R H 1 1 1 0 0 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1097.5942 Q9UK61 Q9UK61 1425 1433 FAM208A Protein FAM208A yes yes 2 0.0018872 122.74 By MS/MS 2 0 1 1 209820 209820 0 8979 2756 9281 22180 17796 17796 1 70969 0 LQAQSLSTVGPR GLRERELEEIRAKLRLQAQSLSTVGPRLAS KLRLQAQSLSTVGPRLASEYLTPEEMVTFK R L Q P R L 1 1 0 0 0 2 0 1 0 0 2 0 0 0 1 2 1 0 0 1 0 0 12 0 1255.6884 O43290 O43290 374 385 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 2 0.0018907 112.64 By MS/MS 4 0 1 1 1463900 1463900 0 8980 201 9282 22181 17797 17797 1 137760 0 LQAVLADNQQLR SRRKKKEYLQGLEARLQAVLADNQQLRREN EARLQAVLADNQQLRRENAALRRRLEALLA R L Q L R R 2 1 1 1 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 12 0 1367.7521 Q99941 Q99941 357 368 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.0077675 95.483 By MS/MS 3.5 0.5 1 1 2 922670 922670 0 8981 2272 9283 22182;22183 17798 17798 1 54914 0 LQCVPNPELLQTEDSLK MLLPQSSAFQLLSHRLQCVPNPELLQTEDS CVPNPELLQTEDSLKAAPKSQKADSPSIDY R L Q L K A 0 0 1 1 1 2 2 0 0 0 4 1 0 0 2 1 1 0 0 1 0 0 17 0 1982.9983 Q08AM6 Q08AM6 717 733 VAC14 Protein VAC14 homolog yes yes 2 7.5363E-11 222.56 By MS/MS 4 0 1 1 1557900 1557900 0 8982 1316 9284 22184 17799;17800 17799 2 146610 0 LQDAINILK GKYVGLVRVLAKHGKLQDAINILKEMKEKD LAKHGKLQDAINILKEMKEKDVLIKDTTAL K L Q L K E 1 0 1 1 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1026.6073 P42704 P42704 764 772 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.7281E-05 182.76 By MS/MS By matching 3.75 0.829 2 1 1 3 1 20574000 20447000 126490 8983 886 9285 22185;22186;22187;22188 17801;17802;17803 17801 3 769340 16100 LQDAYYIFQEMADK QLATAWVSLATGGEKLQDAYYIFQEMADKC KLQDAYYIFQEMADKCSPTLLLLNGQAACH K L Q D K C 2 0 0 2 0 2 1 0 0 1 1 1 1 1 0 0 0 0 2 0 0 0 14 0 1733.7971 O14579 O14579 198 211 COPE Coatomer subunit epsilon yes yes 2 0.00045272 180.61 By MS/MS 8 0 2 2 626500 626500 0 8984 127 9286;9287 22189;22190 17804;17805;17806;17807 17806 74 4 7909.5 0 LQDEFENR GQKQSTTFRRLLISKLQDEFENRTRNVDVY RRLLISKLQDEFENRTRNVDVYDKRENPLL K L Q N R T 0 1 1 1 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 1049.4778 P78344 P78344 171 178 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 7.4458E-07 199.68 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 14627000 14570000 56957 8985 1219 9288 22191;22192;22193;22194;22195 17808;17809 17808 2 1150800 121360 LQDFKLDFGNSQGK IHLRNPSAAFFCVARLQDFKLDFGNSQGKT RLQDFKLDFGNSQGKTSQTWHGGIATIFQS R L Q G K T 0 0 1 2 0 2 0 2 0 0 2 2 0 2 0 1 0 0 0 0 0 0 14 1 1595.7944 O75223 O75223 46 59 GGCT Gamma-glutamylcyclotransferase yes yes 3 0.034661 75.764 By MS/MS 3 0 1 1 187830 0 187830 8986 306 9289 22196 17810 17810 1 0 23908 LQDLATQLQEK AAQAHTRELGRENRRLQDLATQLQEKHHRI ENRRLQDLATQLQEKHHRISLEYSELQDKV R L Q E K H 1 0 0 1 0 3 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 11 0 1285.6878 O75150 O75150 240 250 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.00018375 144.55 By MS/MS 3 0 1 1 444200 444200 0 8987 297 9290 22197 17811 17811 1 8127.6 0 LQDLLETK VYEMKLSTLASKESRLQDLLETKALALAQA LASKESRLQDLLETKALALAQADRLIAQHR R L Q T K A 0 0 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 958.53351 Q8TCG1 Q8TCG1 640 647 KIAA1524 Protein CIP2A yes yes 2 0.0037033 131.5 By MS/MS 4.5 0.5 1 1 2 3187500 3187500 0 8988 1990 9291 22198;22199 17812 17812 1 202410 0 LQDLLLGPK KKRQRQQKQRQLLGRLQDLLLGPKADEQTT RQLLGRLQDLLLGPKADEQTTCEVLDYFLR R L Q P K A 0 0 0 1 0 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 995.60153 Q8N201 Q8N201 954 962 INTS1 Integrator complex subunit 1 yes yes 2 0.015228 91.265 By MS/MS 2.5 0.5 1 1 2 423580 423580 0 8989 1907 9292 22200;22201 17813 17813 1 110790 0 LQDPFSLYR MIDSRDDFTEERLAKLQDPFSLYRCHTIMN EERLAKLQDPFSLYRCHTIMNCTRTCPKGL K L Q Y R C 0 1 0 1 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 9 0 1137.5819 P21912 P21912 234 242 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.013438 88.177 By MS/MS 8 0.816 1 1 1 3 2843100 2843100 0 8990 683 9293 22202;22203;22204 17814 17814 1 36391 0 LQDVGNEQFLEEEGK DDILEKTWNMSVSEKLQDVGNEQFLEEEGK LQDVGNEQFLEEEGKAVLNFSASGSVISLT K L Q G K A 0 0 1 1 0 2 4 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 15 0 1733.8108 Q8IYQ7 Q8IYQ7 103 117 THNSL1 Threonine synthase-like 1 yes yes 2 1.8798E-17 269.14 By MS/MS 5 0 1 1 2818800 2818800 0 8991 1888 9294 22205 17815 17815 1 28271 0 LQEACKDILLFK DPRVIHPKTDEQRCRLQEACKDILLFKNLD RCRLQEACKDILLFKNLDQEQLSQVLDAMF R L Q F K N 1 0 0 1 1 1 1 0 0 1 3 2 0 1 0 0 0 0 0 0 0 0 12 1 1476.801 P13861 P13861 130 141 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit no no 3 0.0023837 107.17 By MS/MS 6 0 1 1 2250700 2250700 0 8992 608 9295 22206 17816 17816 1 15472 0 LQEALNLFK SSYNMVIREDNQTNRLQEALNLFKSIWNNR DNQTNRLQEALNLFKSIWNNRWLRTISVIL R L Q F K S 1 0 1 0 0 1 1 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 9 0 1074.6073 P63092;Q5JWF2 P63092 266 274 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.00038098 150.36 By MS/MS 7 0 1 1 676310 676310 0 8993 1193 9296 22207 17817 17817 1 10617 0 LQEEERER MKRIQRGPVRGISIKLQEEERERRDNYVPE VRGISIKLQEEERERRDNYVPEVSALDQEI K L Q E R R 0 2 0 0 0 1 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 1087.5258 P08708 P08708 73 80 RPS17 40S ribosomal protein S17 yes yes 2 0.01877 131.06 By MS/MS 9.5 0.5 1 1 2 39318000 39318000 0 8994 527 9297 22208;22209 17818;17819 17818 2 1160800 0 LQEESDLELAK LTPEEQLADKLRLKKLQEESDLELAKETFG RLKKLQEESDLELAKETFGVNNAVYGIDAM K L Q A K E 1 0 0 1 0 1 3 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1273.6402 O75822 O75822 123 133 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 2 1.2081E-05 175.49 By MS/MS 7 0 1 1 2626500 2626500 0 8995 349 9298 22210 17820 17820 1 41232 0 LQEESLR GYKLQDLTDVQIMARLQEESLRQDYASTSA TDVQIMARLQEESLRQDYASTSASVSRHSS R L Q L R Q 0 1 0 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 873.4556 Q8ND83 Q8ND83 280 286 SLAIN1 SLAIN motif-containing protein 1 yes yes 2 0.034145 101.6 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 15062000 15062000 0 8996 1956 9299 22211;22212;22213;22214;22215;22216;22217;22218 17821 17821 1 1047300 0 LQEESLRQDYASTSASVSR GYKLQDLTDVQIMARLQEESLRQDYASTSA SLRQDYASTSASVSRHSSSVSLSSGKKGTC R L Q S R H 2 2 0 1 0 2 2 0 0 0 2 0 0 0 0 5 1 0 1 1 0 0 19 1 2126.024 Q8ND83 Q8ND83 280 298 SLAIN1 SLAIN motif-containing protein 1 yes yes 3 0.00010273 161.35 By MS/MS 5 0 1 1 2779400 2779400 0 8997 1956 9300 22219 17822 17822 1 27876 0 LQEIFTEK DEVRQIEGRVVEISRLQEIFTEKVLQQEAE RVVEISRLQEIFTEKVLQQEAEIDSIHQLV R L Q E K V 0 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 8 0 1006.5335 Q9P2W9 Q9P2W9 266 273 STX18 Syntaxin-18 yes yes 2 0.0025323 138.06 By MS/MS 7 0 1 1 7642300 7642300 0 8998 2691 9301 22220 17823 17823 1 119970 0 LQELEANPPSDVYLSSR EYDELAETQGKLEEKLQELEANPPSDVYLS ELEANPPSDVYLSSRDRQILDWHFANLEFA K L Q S R D 1 1 1 1 0 1 2 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 17 0 1916.948 O60341 O60341 508 524 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.00054767 160.04 By MS/MS 4 0 1 1 764910 764910 0 8999 255 9302 22221 17824 17824 1 71983 0 LQELEGAVK ARQQLERQNKELKAKLQELEGAVKSKFKAT KELKAKLQELEGAVKSKFKATISALEAKIG K L Q V K S 1 0 0 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 0 985.54441 P35580 P35580 1801 1809 MYH10 Myosin-10 yes yes 2 0.0016557 120.31 By MS/MS 2.5 0.5 1 1 2 630620 630620 0 9000 825 9303 22222;22223 17825 17825 1 178150 0 LQELFGR MTDRSGDVATGLKGKLQELFGRVTSRVTND VATGLKGKLQELFGRVTSRVTNDGEIWRLY K L Q G R V 0 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 861.47085 Q6P3X3 Q6P3X3 694 700 TTC27 Tetratricopeptide repeat protein 27 yes yes 2 0.041707 95.909 By MS/MS 4 0 1 1 705790 705790 0 9001 1709 9304 22224 17826 17826 1 66420 0 LQELSAEER PGALVIPFSGALELKLQELSAEERQKYLEA GALELKLQELSAEERQKYLEANMTQSALPK K L Q E R Q 1 1 0 0 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1073.5353 Q9NTK5 Q9NTK5 271 279 OLA1 Obg-like ATPase 1 yes yes 2 0.0023375 117.02 By MS/MS 6.5 0.5 1 1 2 1208800 1208800 0 9002 2577 9305 22225;22226 17827 17827 1 16621 0 LQELTDLLQEK AVQELNSFLAQENMRLQELTDLLQEKHRTM ENMRLQELTDLLQEKHRTMSQEFSKLQSKV R L Q E K H 0 0 0 1 0 2 2 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 11 0 1328.7187 Q5VTR2 Q5VTR2 232 242 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.00074309 126.71 By MS/MS 3.5 0.5 1 1 2 190820 190820 0 9003 1648 9306 22227;22228 17828 17828 1 9197.7 0 LQENFSLDLLK PNWDYHAEIQAFGHRLQENFSLDLLKTAFV FGHRLQENFSLDLLKTAFVNSCYIKSEEAK R L Q L K T 0 0 1 1 0 1 1 0 0 0 4 1 0 1 0 1 0 0 0 0 0 0 11 0 1318.7133 Q9H9J2 Q9H9J2 79 89 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.00024832 150.04 By MS/MS 7.5 0.5 1 1 2 458750 458750 0 9004 2487 9307 22229;22230 17829 17829 1 5986.6 0 LQENLQQLQHSTNQLAK KNLMSQLGTKQDSSKLQENLQQLQHSTNQL ENLQQLQHSTNQLAKETNELLKELGSLPLP K L Q A K E 1 0 2 0 0 5 1 0 1 0 4 1 0 0 0 1 1 0 0 0 0 0 17 0 1992.0389 Q86Y82 Q86Y82 59 75 STX12 Syntaxin-12 yes yes 3 0.002948 105.14 By MS/MS 7 0 1 1 1730100 1730100 0 9005 1851 9308 22231 17830 17830 1 27160 0 LQEQEVFFK LRPRKKTLEEEFARKLQEQEVFFKMTGESE EEFARKLQEQEVFFKMTGESECLNPSTQSR K L Q F K M 0 0 0 0 0 2 2 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 9 0 1166.5972 Q9H2G2 Q9H2G2 1197 1205 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.002123 119.75 By MS/MS By matching 1.67 0.471 1 2 1 2 511160 124620 386550 9006 2429 9309 22232;22233;22234 17831 17831 1 42150 441960 LQETLSAADR ______________________________ CSLLRLQETLSAADRCGAALAGHQLIRGLG R L Q D R C 2 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1102.5619 P78527 P78527 15 24 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0047461 106.16 By MS/MS 2 0 1 1 3498100 3498100 0 9007 1225 9310 22235 17832 17832 1 1183200 0 LQETTLVANQLR TLNLRDLFSTFTITRLQETTLVANQLREAA ITRLQETTLVANQLREAASRLKWTTNTGPT R L Q L R E 1 1 1 0 0 2 1 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 12 0 1384.7674 O00754 O00754 951 962 MAN2B1 Lysosomal alpha-mannosidase;Lysosomal alpha-mannosidase A peptide;Lysosomal alpha-mannosidase B peptide;Lysosomal alpha-mannosidase C peptide;Lysosomal alpha-mannosidase D peptide;Lysosomal alpha-mannosidase E peptide yes yes 2 0.0067795 111.27 By MS/MS 10 0 1 1 217940 217940 0 9008 119 9311 22236 17833 17833 1 11746 0 LQEVFGHAIK ERNKPTKNMINIISRLQEVFGHAIKAAYPD NIISRLQEVFGHAIKAAYPDLENPPLLVTP R L Q I K A 1 0 0 0 0 1 1 1 1 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1140.6291 P54136 P54136 80 89 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.0026248 109.83 By MS/MS 6 0.816 2 2 2 6 11150000 11150000 0 9009 1043 9312 22237;22238;22239;22240;22241;22242 17834;17835 17834 2 113120 0 LQEVIETLLSLEK DQRLPECAKLAKEGRLQEVIETLLSLEKQT GRLQEVIETLLSLEKQTRTASDMVSTSRIL R L Q E K Q 0 0 0 0 0 1 3 0 0 1 4 1 0 0 0 1 1 0 0 1 0 0 13 0 1513.8603 O00232 O00232 40 52 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 2.977E-05 182.23 By MS/MS 6 0 1 1 837550 837550 0 9010 94 9313 22243 17836 17836 1 5757.5 0 LQEVLNDYYK DNAELEGSIQVDSNRLQEVLNDYYKEKAEN VDSNRLQEVLNDYYKEKAENCVKLNTLEPL R L Q Y K E 0 0 1 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 2 1 0 0 10 0 1283.6398 Q96GA3 Q96GA3 294 303 LTV1 Protein LTV1 homolog yes yes 2 0.00098727 123.86 By MS/MS 5 0 1 1 1785200 1785200 0 9011 2157 9314 22244 17837 17837 1 17905 0 LQEYLGK FLKYSKAKNLDIDPKLQEYLGKFRRLEDFR KNLDIDPKLQEYLGKFRRLEDFRVDPPMGE K L Q G K F 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 7 0 849.45962 Q6PKG0 Q6PKG0 1011 1017 LARP1 La-related protein 1 yes yes 2 0.013694 125.81 By MS/MS 3 0 1 1 1518500 1518500 0 9012 1722 9315 22245 17838 17838 1 27784 0 LQFHNVKPECLEAYNK HSNLLAKKETSNLYKLQFHNVKPECLEAYN QFHNVKPECLEAYNKICQEVLPKIHEDKHY K L Q N K I 1 0 2 0 1 1 2 0 1 0 2 2 0 1 1 0 0 0 1 1 0 0 16 1 1988.9778 O75323 O75323 76 91 GBAS Protein NipSnap homolog 2 yes yes 3 0.0017767 108.66 By MS/MS 8 0 1 1 1353700 1353700 0 9013 310 9316 22246 17839 17839 1 17090 0 LQGAEHGKK VFGEDGSGKTTLMTKLQGAEHGKKGRGLEY TTLMTKLQGAEHGKKGRGLEYLYLSVHDED K L Q K K G 1 0 0 0 0 1 1 2 1 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 966.52468 O43237 O43237 74 82 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 2 0.0046576 129.42 By MS/MS 6 0 1 1 182840 182840 0 9014 197 9317 22247 17840 17840 1 1256.9 0 LQGEFQLR AERPDVDEKRSDLLKLQGEFQLRLRQLEKS KRSDLLKLQGEFQLRLRQLEKSLLQALNEV K L Q L R L 0 1 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 989.52943 Q14204 Q14204 3734 3741 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0005052 157.68 By MS/MS 2.5 1.12 1 1 1 1 4 5711500 5711500 0 9015 1433 9318 22248;22249;22250;22251 17841;17842 17841 2 1206900 0 LQGEIAHVK EIKIEISELNRVIQRLQGEIAHVKKQCKNV NRVIQRLQGEIAHVKKQCKNVQDAIADAEQ R L Q V K K 1 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 9 0 993.56073 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 406 414 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.00035651 152.06 By MS/MS By MS/MS 5 3.12 3 4 3 2 3 2 2 1 4 12 12 26910000 12865000 14044000 + 9016 55 9319 22252;22253;22254;22255;22256;22257;22258;22259;22260;22261;22262;22263;22264;22265;22266;22267;22268;22269;22270;22271;22272;22273;22274;22275 17843;17844;17845;17846;17847;17848;17849;17850;17851;17852;17853;17854;17855;17856;17857;17858 17845 16 1087600 8123300 LQGEIAHVKK EIKIEISELNRVIQRLQGEIAHVKKQCKNV RVIQRLQGEIAHVKKQCKNVQDAIADAEQR R L Q K K Q 1 0 0 0 0 1 1 1 1 1 1 2 0 0 0 0 0 0 0 1 0 0 10 1 1121.6557 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 406 415 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.018057 108.57 By MS/MS By MS/MS 4.17 1.77 1 1 1 1 2 2 4 4388600 2442000 1946600 + 9017 55 9320 22276;22277;22278;22279;22280;22281 17859;17860 17859 2 19694 489670 LQGETLDQQLGR DNIFILVQAYQRDERLQGETLDQQLGRVLG DERLQGETLDQQLGRVLGEVAPSMFLSSFS R L Q G R V 0 1 0 1 0 3 1 2 0 0 3 0 0 0 0 0 1 0 0 0 0 0 12 0 1356.6997 O15118 O15118 715 726 NPC1 Niemann-Pick C1 protein yes yes 2 0.0056346 101.71 By MS/MS 2 0.816 1 1 1 3 1349500 1349500 0 9018 161 9321 22282;22283;22284 17861 17861 1 286720 0 LQGEVEKYQQLQK ______________________________ KKLQGEVEKYQQLQKDLSKSMSGRQKLEAQ K L Q Q K D 0 0 0 0 0 4 2 1 0 0 2 2 0 0 0 0 0 0 1 1 0 0 13 1 1589.8413 O15212 O15212 9 21 PFDN6 Prefoldin subunit 6 yes yes 3 0.042447 64.827 By MS/MS 10 0 1 1 846810 846810 0 9019 170 9322 22285 17862 17862 1 45640 0 LQGEVQR LDDTEVKKVMEECKRLQGEVQRLREENKQF KVMEECKRLQGEVQRLREENKQFKEEDGLR R L Q Q R L 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 828.44537 O95292 O95292 176 182 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.037605 98.997 By MS/MS 9 0.816 1 1 1 3 5183000 5183000 0 9020 401 9323 22286;22287;22288 17863 17863 1 72335 0 LQGEVVAFDYQSK SVGSQVSCRTCQEQRLQGEVVAFDYQSKML QRLQGEVVAFDYQSKMLALKCPSSSGKPNH R L Q S K M 1 0 0 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 13 0 1482.7355 Q3MHD2 Q3MHD2 25 37 LSM12 Protein LSM12 homolog yes yes 2 1.6602E-05 218.02 By MS/MS 9 0.816 1 1 1 3 6132900 6132900 0 9021 1577 9324 22289;22290;22291 17864;17865 17865 2 107160 0 LQGGTPQEPPNPR LRDALRRSSEMLVKKLQGGTPQEPPNPRMK KKLQGGTPQEPPNPRMKRASSLNFLNKSVE K L Q P R M 0 1 1 0 0 2 1 2 0 0 1 0 0 0 4 0 1 0 0 0 0 0 13 0 1389.7001 Q9H0B6 Q9H0B6 564 576 KLC2 Kinesin light chain 2 yes yes 2 0.00040257 141.71 By MS/MS 5 0 1 1 476160 476160 0 9022 2405 9325 22292 17866 17866 1 4775.6 0 LQGIDLDR ELKDVERKIAQQAAKLQGIDLDRTVQQVNQ IAQQAAKLQGIDLDRTVQQVNQEKQEKQHK K L Q D R T 0 1 0 2 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 928.49779 Q92878 Q92878 816 823 RAD50 DNA repair protein RAD50 yes yes 2 0.034535 88.37 By MS/MS 2 0.816 1 1 1 3 1205500 1205500 0 9023 2074 9326 22293;22294;22295 17867 17867 1 132160 0 LQGILADLR TVDGSPHELESRRVKLQGILADLRDVDGLP ESRRVKLQGILADLRDVDGLPPKVTGPPPG K L Q L R D 1 1 0 1 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 9 0 997.59203 Q9NRL3 Q9NRL3 353 361 STRN4 Striatin-4 yes yes 2 0.0139 93.598 By MS/MS 4.5 0.5 1 1 2 468790 468790 0 9024 2555 9327 22296;22297 17868 17868 1 36129 0 LQGINCGPDFTPSFANLGR DKANKTPLRPLDPTRLQGINCGPDFTPSFA NCGPDFTPSFANLGRTTLSTRGPPRGGPGG R L Q G R T 1 1 2 1 1 1 0 3 0 1 2 0 0 2 2 1 1 0 0 0 0 0 19 0 2062.9895 Q04637 Q04637 657 675 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.9909E-05 210.02 By MS/MS 2 0 2 2 1285900 1285900 0 9025 1291 9328 22298;22299 17869;17870;17871 17869 3 434940 0 LQGQKEPGDQGPAHPPGADMSHSL TRAKEKRQQVEALYRLQGQKEPGDQGPAHP QGPAHPPGADMSHSL_______________ R L Q S L - 2 0 0 2 0 3 1 4 2 0 2 1 1 0 4 2 0 0 0 0 0 0 24 1 2453.1394 Q9Y399 Q9Y399 273 296 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 4 0.016033 57.248 By MS/MS 8 0 1 1 663260 663260 0 9026 2860 9329 22300 17872;17873 17872 2 8373.6 0 LQGQLEQGDDTAAERLEK RADTKRLKLLEEERRLQGQLEQGDDTAAER QLEQGDDTAAERLEKVYEELRATGAAAAEA R L Q E K V 2 1 0 2 0 3 3 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 18 1 1999.9811 Q8NE71 Q8NE71 397 414 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 3 0.0027197 96.247 By MS/MS 4.5 0.5 1 1 2 3152900 3152900 0 9027 1960 9330 22301;22302 17874 17874 1 247070 0 LQGQLQGGSR DLLRRIIRILNLSKRLQGQLQGGSREITKA NLSKRLQGQLQGGSREITKAAQSLNELDYL R L Q S R E 0 1 0 0 0 3 0 3 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1042.552 Q9UP83 Q9UP83 189 198 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0010339 122.96 By MS/MS 4.5 0.5 1 1 2 2668900 2668900 0 9028 2797 9331 22303;22304 17875 17875 1 133710 0 LQHAAELIK ILAKQQKKFGEEIARLQHAAELIKTVASRY GEEIARLQHAAELIKTVASRYDEYVNVKDF R L Q I K T 2 0 0 0 0 1 1 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1021.592 Q8WUM4 Q8WUM4 277 285 PDCD6IP Programmed cell death 6-interacting protein yes yes 3 0.0094507 136.99 By MS/MS 4 0 1 1 404580 404580 0 9029 2018 9332 22305 17876 17876 1 38073 0 LQHALEDQIYR PAHPDKPKKHSPKRRLQHALEDQIYRIFRK PKRRLQHALEDQIYRIFRKSRVLTNQSINC R L Q Y R I 1 1 0 1 0 2 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 11 0 1384.7099 Q8ND04 Q8ND04 300 310 SMG8 Protein SMG8 yes yes 3 0.00063489 126.71 By MS/MS 4 0.816 1 1 1 3 1131700 1131700 0 9030 1954 9333 22306;22307;22308 17877 17877 1 56952 0 LQIDEQLR HIAYLKEVEQLRMERLQIDEQLRQIGSRSY EQLRMERLQIDEQLRQIGSRSYSGRGRGRR R L Q L R Q 0 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1013.5506 P51116;P51114 P51114 369 376 FXR2;FXR1 Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation syndrome-related protein 1 no no 2 0.014707 105.52 By MS/MS By matching 4.67 0.471 1 2 2 1 4818800 4744700 74086 9031 988;987 9334 22309;22310;22311 17878;17879;17880 17880 3 178930 62216 LQIEDFEAR YGHWSIMKWNRERRRLQIEDFEARIALLPL NRERRRLQIEDFEARIALLPLLQAETDRRT R L Q A R I 1 1 0 1 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1119.556 Q9P0J0 Q9P0J0 60 68 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2 0.00026215 154.01 By MS/MS By matching 10 0 2 1 1 13812000 13763000 48565 9032 2664 9335 22312;22313 17881 17881 1 741780 62177 LQIEESSKPVR ECRPAASENYMRLKRLQIEESSKPVRLSQQ RLKRLQIEESSKPVRLSQQLDKVVTTNYKP R L Q V R L 0 1 0 0 0 1 2 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 11 1 1284.7038 P13984 P13984 130 140 GTF2F2 General transcription factor IIF subunit 2 yes yes 2 0.001308 137.46 By MS/MS 8 0 1 1 312230 312230 0 9033 609 9336 22314 17882 17882 1 3941.9 0 LQIQGQTNDAK TAECGTFPIDLTKTRLQIQGQTNDAKFKEI TKTRLQIQGQTNDAKFKEIRYRGMLHALVR R L Q A K F 1 0 1 1 0 3 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 11 0 1214.6255 Q5SVS4 Q5SVS4 33 43 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 2.0216E-05 163.66 By MS/MS 8 0 1 1 1740700 1740700 0 9034 1622 9337 22315 17883 17883 1 21976 0 LQIWDTAGQESFR EFGARMITIDGKQIKLQIWDTAGQESFRSI IKLQIWDTAGQESFRSITRSYYRGAAGALL K L Q F R S 1 1 0 1 0 2 1 1 0 1 1 0 0 1 0 1 1 1 0 0 0 0 13 0 1549.7525 P61019;Q8WUD1 P61019 57 69 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 1.1037E-20 179.59 By MS/MS 9 0 1 1 329240 329240 0 9035 1105 9338 22316 17884 17884 0 6479.6 0 LQIYYQELEK IKDQIEVMKGNVKSRLQIYYQELEKFKARW NVKSRLQIYYQELEKFKARWDQLKPGDDVI R L Q E K F 0 0 0 0 0 2 2 0 0 1 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1325.6867 Q8NCM8 Q8NCM8 1044 1053 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0098736 94.616 By MS/MS 2 0.816 1 1 1 3 457230 457230 0 9036 1952 9339 22317;22318;22319 17885;17886;17887 17886 3 120570 0 LQKEEEIEFLYNENTVR PWYNAYRFLIQNVLRLQKEEEIEFLYNENT KEEEIEFLYNENTVRESPNITDRWILSFMQ R L Q V R E 0 1 2 0 0 1 5 0 0 1 2 1 0 1 0 0 1 0 1 1 0 0 17 1 2153.0641 P41252 P41252 670 686 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.00032374 161.94 By MS/MS 3.5 0.5 1 1 2 1157500 1157500 0 9037 871 9340 22320;22321 17888 17888 1 38955 0 LQKEMQDLSEFCSDKPK DTYVFAVGTRKALVRLQKEMQDLSEFCSDK KEMQDLSEFCSDKPKSGAKYGLPDSLAILS R L Q P K S 0 0 0 2 1 2 2 0 0 0 2 3 1 1 1 2 0 0 0 0 0 0 17 2 2081.9762 Q96A33 Q96A33 272 288 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 0.0045597 98.552 By MS/MS 6 0 1 1 2840800 2840800 0 9038 2101 9341 22322 17889 17889 1 19528 0 LQKEQEKLQR KPVDTAAREREVEERLQKEQEKLQRQLDEP EVEERLQKEQEKLQRQLDEPKLERRPRERH R L Q Q R Q 0 1 0 0 0 3 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1298.7306 P23588 P23588 380 389 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 7.8697E-14 227.99 By MS/MS By MS/MS 5.22 0.916 2 4 2 1 6 3 16270000 15294000 976880 9039 708 9342 22323;22324;22325;22326;22327;22328;22329;22330;22331 17890;17891;17892;17893;17894;17895;17896 17894 7 174500 845470 LQKVETEIQR NLRQELEGCYEKVARLQKVETEIQRVSEAY EKVARLQKVETEIQRVSEAYENLVKSSSKR R L Q Q R V 0 1 0 0 0 2 2 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 10 1 1242.6932 Q4VCS5 Q4VCS5 462 471 AMOT Angiomotin yes yes 3 0.0011107 134.23 By MS/MS 3.5 0.5 1 1 2 516870 516870 0 9040 1584 9343 22332;22333 17897 17897 0 30413 0 LQLANEEIAQVR EGQRYQALKAHAEEKLQLANEEIAQVRSKA EEKLQLANEEIAQVRSKAQAEALALQASLR K L Q V R S 2 1 1 0 0 2 2 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1382.7518 Q9Y6A5 Q9Y6A5 775 786 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 2 0.0075516 96.113 By MS/MS 3 0 1 1 278360 278360 0 9041 2937 9344 22334 17898 17898 1 5093.3 0 LQLDSPEDAEFIVAK SLSYSRISLADIAQKLQLDSPEDAEFIVAK LQLDSPEDAEFIVAKAIRDGVIEASINHEK K L Q A K A 2 0 0 2 0 1 2 0 0 1 2 1 0 1 1 1 0 0 0 1 0 0 15 0 1673.8512 O43242 O43242 426 440 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 2.3281E-16 249.98 By MS/MS By MS/MS 4.5 2.06 1 1 2 3 1 23339000 23276000 63322 9042 198 9345 22335;22336;22337;22338 17899;17900;17901;17902;17903 17903 5 197660 64887 LQLLEDDKENR LGLVDIVKGTNSYYKLQLLEDDKENRYWIF SYYKLQLLEDDKENRYWIFRSWGRVGTVIG K L Q N R Y 0 1 1 2 0 1 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1371.6994 P09874 P09874 572 582 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 3.1426E-05 176.6 By MS/MS 4.5 0.5 1 1 2 2394600 2394600 0 9043 543 9346 22339;22340 17904 17904 1 199470 0 LQLLSNLFHGMDK EKLVKFREGERPSLRLQLLSNLFHGMDKNT LRLQLLSNLFHGMDKNTPVRYTVYCSLIKV R L Q D K N 0 0 1 1 0 1 0 1 1 0 4 1 1 1 0 1 0 0 0 0 0 0 13 0 1514.7915 Q7L2H7 Q7L2H7 103 115 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2;3 0.00033767 147.26 By MS/MS 7 0 2 2 1489800 1489800 0 9044 1762 9347 22341;22342 17905;17906 17906 932 2 23388 0 LQLVVENSAQR RAVELLPDGTANLAKLQLVVENSAQRVIHL NLAKLQLVVENSAQRVIHLAGQWEKHRVPL K L Q Q R V 1 1 1 0 0 2 1 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1255.6884 O60826 O60826 403 413 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.00014866 147.62 By MS/MS 5 0 1 1 1791900 1791900 0 9045 280 9348 22343 17907 17907 1 17971 0 LQLWDIAGQER FALKVLQWSDYEIVRLQLWDIAGQERFTSM EIVRLQLWDIAGQERFTSMTRLYYRDASAC R L Q E R F 1 1 0 1 0 2 1 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 11 0 1327.6884 O14966;P57729;Q13637 O14966 59 69 RAB29;RAB38;RAB32 Ras-related protein Rab-7L1;Ras-related protein Rab-38;Ras-related protein Rab-32 yes no 2 1.1303E-06 189.17 By MS/MS 8.5 0.5 1 1 2 558400 558400 0 9046 150 9349 22344;22345 17908;17909 17908 2 8206.3 0 LQLWDTAGQER FFSRLLEIEPGKRIKLQLWDTAGQERFRSI KRIKLQLWDTAGQERFRSITRSYYRNSVGG K L Q E R F 1 1 0 1 0 2 1 1 0 0 2 0 0 0 0 0 1 1 0 0 0 0 11 0 1315.6521 P20340;Q14964;Q9NRW1 Q14964 64 74 RAB6A;RAB39A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-39A;Ras-related protein Rab-6B no no 2 1.5962E-13 242.35 By MS/MS 9 0.816 2 2 2 6 11569000 11569000 0 9047 1461;670;2558 9350 22346;22347;22348;22349;22350;22351 17910;17911;17912;17913 17910 4 196860 0 LQMEAPHIIVGTPGR HACIGGTNVRAEVQKLQMEAPHIIVGTPGR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI K L Q G R V 1 1 0 0 0 1 1 2 1 2 1 0 1 0 2 0 1 0 0 1 0 0 15 0 1617.8661 P60842 P60842 147 161 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 8.5232E-05 182.02 By MS/MS 5.79 2.58 2 3 1 3 3 4 4 4 4 1 29 758590000 758590000 0 9048 1097 9351;9352 22352;22353;22354;22355;22356;22357;22358;22359;22360;22361;22362;22363;22364;22365;22366;22367;22368;22369;22370;22371;22372;22373;22374;22375;22376;22377;22378;22379;22380 17914;17915;17916;17917;17918;17919;17920;17921;17922;17923;17924;17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940 17933 620 27 9668200 0 LQMEQQQQLQQR SFMILVLPVVFETEKLQMEQQQQLQQRQIL TEKLQMEQQQQLQQRQILLGPNTGLSGGMP K L Q Q R Q 0 1 0 0 0 7 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 12 0 1556.7729 Q9NS69 Q9NS69 106 117 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 2 1.0457E-33 304.63 By MS/MS 9 0 2 2 5045300 5045300 0 9049 2566 9353;9354 22381;22382 17941;17942 17942 1111 2 99293 0 LQNKEHVIEALR ARVHIGQVIMSIRTKLQNKEHVIEALRRAK RTKLQNKEHVIEALRRAKFKFPGRQKIHIS K L Q L R R 1 1 1 0 0 1 2 0 1 1 2 1 0 0 0 0 0 0 0 1 0 0 12 1 1448.81 P27635 P27635 142 153 RPL10 60S ribosomal protein L10 yes yes 3 0.016909 81.676 By MS/MS 8.5 0.5 1 1 2 1053300 1053300 0 9050 743 9355 22383;22384 17943 17943 1 16719 0 LQNLFVDDSGR LLFTLAENCIDQVMKLQNLFVDDSGRYLAI QVMKLQNLFVDDSGRYLAIQFHLECAYVFL K L Q G R Y 0 1 1 2 0 1 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1262.6255 Q6P3X3 Q6P3X3 217 227 TTC27 Tetratricopeptide repeat protein 27 yes yes 2 0.0081919 95.483 By MS/MS 4 0 1 1 532790 532790 0 9051 1709 9356 22385 17944;17945 17944 2 50139 0 LQNLQLQPGNAK QGKLKITGNMGLAMKLQNLQLQPGNAKL__ AMKLQNLQLQPGNAKL______________ K L Q A K L 1 0 2 0 0 3 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 12 0 1322.7306 P22307 P22307 535 546 SCP2 Non-specific lipid-transfer protein yes yes 2 0.00070497 130.66 By MS/MS 10 0 1 1 376340 376340 0 9052 690 9357 22386 17946 17946 1 20283 0 LQNQQNGQR IGVTCVFPIDLAKTRLQNQQNGQRVYTSMS DLAKTRLQNQQNGQRVYTSMSDCLIKTVRS R L Q Q R V 0 1 2 0 0 4 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1084.5374 Q9H936 Q9H936 36 44 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 2.4521E-05 176.41 By MS/MS 8 0 1 1 219450 219450 0 9053 2480 9358 22387 17947 17947 1 2770.5 0 LQPAYQVTLPGQEPIVK MKLPWDSLLTRCLEKLQPAYQVTLPGQEPI PAYQVTLPGQEPIVKKGRICPIDITLAQRA K L Q V K K 1 0 0 0 0 3 1 1 0 1 2 1 0 0 3 0 1 0 1 2 0 0 17 0 1880.0407 P41214 P41214 468 484 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.00052931 155.43 By MS/MS 5 0 1 1 1297300 1297300 0 9054 867 9359 22388 17948 17948 1 13011 0 LQPFATEADVEEALR LEAIVRIAEALSKMKLQPFATEADVEEALR LQPFATEADVEEALRLFQVSTLDAALSGTL K L Q L R L 3 1 0 1 0 1 3 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 15 0 1687.8417 P33992 P33992 628 642 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00051323 149.82 By MS/MS 4 0 1 1 927100 927100 0 9055 807 9360 22389 17949 17949 1 87246 0 LQPLSPVPSDIEISR LREQQHRRWRLHCLKLQPLSPVPSDIEISR LQPLSPVPSDIEISRGQTPKAVDVLAKEIG K L Q S R G 0 1 0 1 0 1 1 0 0 2 2 0 0 0 3 3 0 0 0 1 0 0 15 0 1649.8988 Q6UB35 Q6UB35 353 367 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00060461 157.33 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 16398000 16337000 61274 9056 1728 9361 22390;22391;22392;22393;22394 17950;17951 17950 2 1327700 130550 LQPSSSPENSLDPFPPR RFQLEELRKFGAQFKLQPSSSPENSLDPFP PSSSPENSLDPFPPRILKEEPKGKEKEVDG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 Q8WWM7 Q8WWM7 554 570 ATXN2L Ataxin-2-like protein yes yes 2 0.00046538 151.66 By MS/MS 3.5 0.5 1 1 2 931060 931060 0 9057 2036 9362 22395;22396 17952;17953;17954;17955 17952 4 55541 0 LQQFFNER HNSFEQFCINYCNEKLQQFFNERILKEEQE INYCNEKLQQFFNERILKEEQELYQKEGLG K L Q E R I 0 1 1 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1080.5352 Q9UM54 Q9UM54 480 487 MYO6 Unconventional myosin-VI yes yes 2 0.0074201 114.28 By MS/MS 3 0 1 1 863050 863050 0 9058 2781 9363 22397 17956 17956 1 15791 0 LQQLEALR RQAFLSGRSRPLRFRLQQLEALRRMVQERE SRPLRFRLQQLEALRRMVQEREKDILTAIA R L Q L R R 1 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 969.56073 P51648 P51648 24 31 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 0.01366 107.01 By MS/MS 6 0 1 1 3818000 3818000 0 9059 1002 9364 22398 17957 17957 1 26246 0 LQQLPADFGR CGLTHLVKLDLSKNKLQQLPADFGRLVNLQ LSKNKLQQLPADFGRLVNLQHLDLLNNKLV K L Q G R L 1 1 0 1 0 2 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 10 0 1143.6037 Q96AG4 Q96AG4 74 83 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.001315 117.53 By MS/MS 7.5 0.5 1 1 2 10050000 10050000 0 9060 2107 9365 22399;22400 17958;17959;17960 17958 3 151090 0 LQQQAALSPTTAPAVSSVSK AFVKALQQEQEIEQRLQQQAALSPTTAPAV ALSPTTAPAVSSVSKQETIMRHHTLRQAPQ R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 Q8WXI9 Q8WXI9 479 498 GATAD2B Transcriptional repressor p66-beta yes yes 2 7.9282E-06 138.05 By MS/MS 5 0 1 1 1559800 1559800 0 9061 2040 9366 22401 17961 17961 1 15644 0 LQQQELR VKEVEKLQEKREKRRLQQQELREKRAQDVD QEKREKRRLQQQELREKRAQDVDATNPNYE R L Q L R E 0 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 913.49813 O00139 O00139 175 181 KIF2A Kinesin-like protein KIF2A yes yes 2 0.002016 147.69 By MS/MS 4 0 1 1 0 0 0 9062 82 9367 22402 17962 17962 1 0 0 LQQQEQR ETDKETSLVKQTLAKLQQQEQREEAQWTPT LVKQTLAKLQQQEQREEAQWTPTKLSSKNV K L Q Q R E 0 1 0 0 0 4 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 928.47264 Q5SW79 Q5SW79 748 754 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.013694 125.81 By MS/MS 2 0 1 1 211160 211160 0 9063 1623 9368 22403 17963 17963 1 71424 0 LQQQLTQAQETLK QGHLKRASNESTRQRLQQQLTQAQETLKSL QRLQQQLTQAQETLKSLGALKK________ R L Q L K S 1 0 0 0 0 5 1 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 13 0 1527.8257 Q9Y4P3 Q9Y4P3 428 440 TBL2 Transducin beta-like protein 2 yes yes 2 5.1747E-70 371.4 By MS/MS 7 0 1 1 11888000 11888000 0 9064 2899 9369 22404 17964 17964 1 186620 0 LQQQQRPEDAEDGAEGGGK ______________________________ QRPEDAEDGAEGGGKRGEAGWEGGYPEIVK R L Q G K R 2 1 0 2 0 4 3 4 0 0 1 1 0 0 1 0 0 0 0 0 0 0 19 1 2011.9195 Q08J23 Q08J23 10 28 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3 0.022095 103.87 By MS/MS 4 0 1 1 0 0 0 9065 1317 9370 22405 17965 17965 1 0 0 LQQTEAELR PVKVPLEVQEADEAKLQQTEAELRKVDEAI EADEAKLQQTEAELRKVDEAIALFQKML__ K L Q L R K 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1086.5669 P26640 P26640 1243 1251 VARS Valine--tRNA ligase yes yes 2 0.0048784 109.44 By MS/MS 3.5 0.5 1 1 2 909500 909500 0 9066 735 9371 22406;22407 17966 17966 1 34086 0 LQQTYAALNSK NQRRYRQRRKAELVKLQQTYAALNSKATFY ELVKLQQTYAALNSKATFYGEQVDYYKSYI K L Q S K A 2 0 1 0 0 2 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 0 11 0 1235.651 P46940 P46940 1506 1516 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.004343 106.16 By MS/MS 1.5 0.5 1 1 2 674770 674770 0 9067 922 9372 22408;22409 17967 17967 1 203830 0 LQQVDPVLLK PVGVGEQLSEGDYARLQQVDPVLLKDEPQQ GDYARLQQVDPVLLKDEPQQTAAQMGFAPI R L Q L K D 0 0 0 1 0 2 0 0 0 0 3 1 0 0 1 0 0 0 0 2 0 0 10 0 1151.6914 O75179 O75179 929 938 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.010664 92.838 By MS/MS 1.5 0.5 1 1 2 180940 180940 0 9068 304 9373 22410;22411 17968 17968 1 54908 0 LQQVLTGLR SLALGALPGFLLKGRLQQVLTGLRAVTHTS FLLKGRLQQVLTGLRAVTHTSPEDVSFAES R L Q L R A 0 1 0 0 0 2 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1026.6186 Q9BTW9 Q9BTW9 791 799 TBCD Tubulin-specific chaperone D yes yes 2 0.0014431 128.38 By MS/MS 3.5 0.5 1 1 2 1293000 1293000 0 9069 2319 9374 22412;22413 17969;17970 17969 2 68811 0 LQRLEDELNR SLLVKIKVLEQDKARLQRLEDELNRAKSTL QDKARLQRLEDELNRAKSTLEAETRVKQRL R L Q N R A 0 2 1 1 0 1 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 1 1284.6786 P15924 P15924 1829 1838 DSP Desmoplakin yes yes 2;3 0.00046287 158.87 By MS/MS By MS/MS 2.4 1.11 3 2 3 2 5 5 9475800 5029100 4446800 9070 628 9375 22414;22415;22416;22417;22418;22419;22420;22421;22422;22423 17971;17972;17973;17974 17973 4 604810 742520 LQRVQNQLK QKQEQKNQLFHAVQRLQRVQNQLKSMRQAA FHAVQRLQRVQNQLKSMRQAAADAKPESLM R L Q L K S 0 1 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 1 1125.6618 Q8WYA0 Q8WYA0 240 248 IFT81 Intraflagellar transport protein 81 homolog yes yes 3 0.026134 79.713 By MS/MS 6 0 1 1 4336600 4336600 0 9071 2043 9376 22424 17975 17975 1 29811 0 LQSAGSAMPTSSSFK KHTRLRTSPALKTTRLQSAGSAMPTSSSFK LQSAGSAMPTSSSFKHRIKEQEDYIRDWTA R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 Q5SW79 Q5SW79 1268 1282 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.00048563 148.89 By MS/MS 2 0 1 1 110720 110720 0 9072 1623 9377 22425 17976 17976 889 1 37448 0 LQSAMTEGGVVLR YQPTPWEAASDSMKRLQSAMTEGGVVLREP KRLQSAMTEGGVVLREPQRIYE________ R L Q L R E 1 1 0 0 0 1 1 2 0 0 2 0 1 0 0 1 1 0 0 2 0 0 13 0 1359.718 Q9H0U6 Q9H0U6 161 173 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 6.0951E-12 242.97 By MS/MS 9 0 2 2 2949800 2949800 0 9073 2417 9378;9379 22426;22427 17977;17978 17977 1087 2 58053 0 LQSDDILPLGK NHYPVESSWIAPELRLQSDDILPLGKDSGP PELRLQSDDILPLGKDSGPLSDPITGKPYV R L Q G K D 0 0 0 2 0 1 0 1 0 1 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1197.6605 Q7L2E3 Q7L2E3 378 388 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 1.6518E-05 167.12 By MS/MS By MS/MS 3.4 1.02 1 2 1 1 4 1 7332700 7188000 144710 9074 1761 9380 22428;22429;22430;22431;22432 17979;17980;17981;17982 17981 4 259370 18420 LQSEGGSGLDSSPFLSEANAER GVLAEMAKKSMPGGRLQSEGGSGLDSSPFL GLDSSPFLSEANAERIVQTLCTVRGAALKV R L Q E R I 2 1 1 1 0 1 3 3 0 0 3 0 0 1 1 5 0 0 0 0 0 0 22 0 2250.04 Q96D53 Q96D53 120 141 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 4.6966E-28 292.76 By MS/MS 7 0.816 1 1 1 3 3566800 3566800 0 9075 2132 9381 22433;22434;22435 17983 17983 1 29147 0 LQSEPESIRK NGPTDSYAAISQVDRLQSEPESIRKWREEQ SQVDRLQSEPESIRKWREEQMERLEALDAN R L Q R K W 0 1 0 0 0 1 2 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1185.6354 P09496 P09496 103 112 CLTA Clathrin light chain A yes yes 3 0.019448 104.42 By MS/MS 8 0 1 1 1393600 1393600 0 9076 536 9382 22436 17984 17984 1 17594 0 LQSGHLTK TDQASPQEDYAGFERLQSGHLTKLLEDDFW DYAGFERLQSGHLTKLLEDDFWADVSTLHV R L Q T K L 0 0 0 0 0 1 0 1 1 0 2 1 0 0 0 1 1 0 0 0 0 0 8 0 882.49232 Q9NU22 Q9NU22 4549 4556 MDN1 Midasin yes yes 2 0.0034326 132.76 By MS/MS 1.5 0.5 1 1 2 264550 264550 0 9077 2580 9383 22437;22438 17985 17985 1 70561 0 LQSGICHLFR RVIDLRTSTSQAVFRLQSGICHLFRETLIN QAVFRLQSGICHLFRETLINKGFVEIQTPK R L Q F R E 0 1 0 0 1 1 0 1 1 1 2 0 0 1 0 1 0 0 0 0 0 0 10 0 1229.6339 P14868 P14868 198 207 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0072699 100.48 By MS/MS 6 0 1 1 2247300 2247300 0 9078 620 9384 22439 17986 17986 1 15448 0 LQSIGTENTEENRR GILAADESTGSIAKRLQSIGTENTEENRRF RLQSIGTENTEENRRFYRQLLLTADDRVNP R L Q R R F 0 2 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 14 1 1645.802 P04075 P04075 44 57 ALDOA Fructose-bisphosphate aldolase A yes yes 2;3 0.009334 104.52 By MS/MS By matching 7 0 3 2 1 16589000 16534000 55664 9079 467 9385 22440;22441;22442 17987;17988 17988 2 259550 100250 LQSLLAK EKEIMAEDDQVFLMKLQSLLAKQPPTAAGR DDQVFLMKLQSLLAKQPPTAAGRPVDASPR K L Q A K Q 1 0 0 0 0 1 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 7 0 771.48544 Q9Y6G9 Q9Y6G9 379 385 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.034145 101.6 By MS/MS 6 0 1 1 2577000 2577000 0 9080 2943 9386 22443 17989 17989 1 17715 0 LQSLTENLTK DKSRSLNESKIEIERLQSLTENLTKEHLML IEIERLQSLTENLTKEHLMLEEELRNLRLE R L Q T K E 0 0 1 0 0 1 1 0 0 0 3 1 0 0 0 1 2 0 0 0 0 0 10 0 1145.6292 P15924 P15924 1706 1715 DSP Desmoplakin yes yes 2 0.019639 103.31 By MS/MS 3 0 1 1 267980 0 267980 9081 628 9387 22444 17990 17990 1 0 34110 LQSQLQENEEFQK SQQAKNCPISAKLERLQSQLQENEEFQKSL ERLQSQLQENEEFQKSLNQHSGSYEVIVAE R L Q Q K S 0 0 1 0 0 4 3 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 13 0 1619.7791 Q9UPN3 Q9UPN3 4834 4846 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 1.0262E-05 196.16 By MS/MS 1 0 1 1 216490 216490 0 9082 2798 9388 22445 17991 17991 1 52167 0 LQSQTENLKK ETKVQISQLHQEIQRLQSQTENLKKQNASL QEIQRLQSQTENLKKQNASLQAAITDAEQR R L Q K K Q 0 0 1 0 0 2 1 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 10 1 1187.651 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 340 349 KRT78 Keratin, type II cytoskeletal 78 yes no 3 0.0021442 136.52 By matching By MS/MS 4.43 1.59 1 1 2 1 1 1 4 3 3016800 2494900 521870 + 9083 70 9389 22446;22447;22448;22449;22450;22451;22452 17992 17992 1 90319 156790 LQSQVLQAMR RIEIVVVGTGDRTERLQSQVLQAMRQRGIA DRTERLQSQVLQAMRQRGIAVEVQDTPNAC R L Q M R Q 1 1 0 0 0 3 0 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1172.6336 Q9BU61 Q9BU61 126 135 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 1.7289E-07 183.72 By MS/MS 10 0 1 1 2355900 2355900 0 9084 2321 9390 22453 17993 17993 1071 1 126970 0 LQSSNIFTVAK QIRDCPLNAEAASSKLQSSNIFTVAKRNVE ASSKLQSSNIFTVAKRNVEGQDMLYQSLKL K L Q A K R 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 2 1 0 0 1 0 0 11 0 1206.6608 Q10567 Q10567 877 887 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.008601 113.44 By MS/MS 4 0 1 1 1907000 1907000 0 9085 1322 9391 22454 17994 17994 1 179470 0 LQSSPNPAALLTLR VFSLVRAHYKQVATRLQSSPNPAALLTLRM RLQSSPNPAALLTLRMEFTRILCSHEHYVT R L Q L R M 2 1 1 0 0 1 0 0 0 0 4 0 0 0 2 2 1 0 0 0 0 0 14 0 1479.8409 Q96HP0 Q96HP0 1028 1041 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 4.1741E-05 190.35 By MS/MS 2 0 1 1 167890 167890 0 9086 2166 9392 22455 17995 17995 1 56786 0 LQSSQEPEAPPPR SPKARRGKARRRAAKLQSSQEPEAPPPRDV AKLQSSQEPEAPPPRDVALLQGRANDLVKY K L Q P R D 1 1 0 0 0 2 2 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1434.7103 Q9UNF1 Q9UNF1 262 274 MAGED2 Melanoma-associated antigen D2 yes yes 2 6.1088E-06 199.12 By MS/MS 5 0 1 1 528750 528750 0 9087 2787 9393 22456 17996 17996 1 5303.1 0 LQSSQEPEAPPPRDVALLQGR SPKARRGKARRRAAKLQSSQEPEAPPPRDV PEAPPPRDVALLQGRANDLVKYLLAKDQTK K L Q G R A 2 2 0 1 0 3 2 1 0 0 3 0 0 0 4 2 0 0 0 1 0 0 21 1 2287.1921 Q9UNF1 Q9UNF1 262 282 MAGED2 Melanoma-associated antigen D2 yes yes 3 0.030169 60.938 By MS/MS 5 0 1 1 1410600 1410600 0 9088 2787 9394 22457 17997 17997 1 14148 0 LQSWLYSSR KFYDDPRSNDGNSYRLQSWLYSSRLLQYSD DGNSYRLQSWLYSSRLLQYSDALEHLLTTG R L Q S R L 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 3 0 1 1 0 0 0 9 0 1138.5771 O95299 O95299 131 139 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.0048784 109.44 By MS/MS 7 0 1 1 1544900 1544900 0 9089 404 9395 22458 17998 17998 1 24252 0 LQTFLSK AKKENTAAENGLTVRLQTFLSKRPMPLSAR AENGLTVRLQTFLSKRPMPLSARGNSRLNI R L Q S K R 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 7 0 835.48035 Q12789 Q12789 1156 1162 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.040933 96.492 By MS/MS 2.5 0.5 1 1 2 1003400 1003400 0 9090 1328 9396 22459;22460 17999 17999 1 239590 0 LQTINLSFNR NFLNSLPEEMESLVRLQTINLSFNRFKMLP ESLVRLQTINLSFNRFKMLPEVLYRIFTLE R L Q N R F 0 1 2 0 0 1 0 0 0 1 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1204.6564 Q9H9A6 Q9H9A6 497 506 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.038026 78.113 By MS/MS 5 0 1 1 485250 485250 0 9091 2484 9397 22461 18000 18000 1 4866.8 0 LQTQVFK DYILGLKIEDFLERRLQTQVFKLGLAKSIH IEDFLERRLQTQVFKLGLAKSIHHARVLIR R L Q F K L 0 0 0 0 0 2 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 7 0 862.49125 P46781 P46781 110 116 RPS9 40S ribosomal protein S9 yes yes 2 0.0027455 166.78 By MS/MS By matching 9 0.707 1 2 1 3 1 51751000 51633000 117860 9092 918 9398 22462;22463;22464;22465 18001;18002;18003 18002 3 1031000 268750 LQTSDELLTEPK EIYSYLETLFCQLLKLQTSDELLTEPKQLP LLKLQTSDELLTEPKQLPEKYSLPASPSVI K L Q P K Q 0 0 0 1 0 1 2 0 0 0 3 1 0 0 1 1 2 0 0 0 0 0 12 0 1372.7086 Q6NUQ1 Q6NUQ1 277 288 RINT1 RAD50-interacting protein 1 yes yes 2 3.5488E-07 202.31 By MS/MS 4.5 0.5 1 1 2 6699900 6699900 0 9093 1688 9399 22466;22467 18004;18005 18005 2 354170 0 LQTSSVLVSGLR YSRQLYVLGHEAMKRLQTSSVLVSGLRGLG MKRLQTSSVLVSGLRGLGVEIAKNIILGGV R L Q L R G 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 3 1 0 0 2 0 0 12 0 1258.7245 P22314 P22314 70 81 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 6.8401E-09 218.55 By MS/MS 4 0 1 1 1146200 1146200 0 9094 691 9400 22468 18006 18006 1 107860 0 LQVAGEITTGPR SQVIFTNPLEIVKIRLQVAGEITTGPRVSA KIRLQVAGEITTGPRVSALSVVRDLGFFGI R L Q P R V 1 1 0 0 0 1 1 2 0 1 1 0 0 0 1 0 2 0 0 1 0 0 12 0 1240.6776 Q9UJS0;O75746 Q9UJS0 456 467 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 2.3527E-05 175.74 By MS/MS 5.4 2.42 1 1 1 1 1 5 36693000 36693000 0 9095 2748;344 9401 22469;22470;22471;22472;22473 18007;18008;18009;18010 18008 3 433370 0 LQVEEVHQLSR DQASITARNHIQLVKLQVEEVHQLSRKAET QLVKLQVEEVHQLSRKAETKLAEAQIEELR K L Q S R K 0 1 0 0 0 2 2 0 1 0 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1336.7099 Q9NR28 Q9NR28 192 202 DIABLO Diablo homolog, mitochondrial yes yes 3 0.033807 75.416 By MS/MS 9 0 1 1 1234300 1234300 0 9096 2544 9402 22474 18011 18011 1 24291 0 LQVELDNVTGLLSQSDSK EGERVRTELADKVTKLQVELDNVTGLLSQS ELDNVTGLLSQSDSKSSKLTKDFSALESQL K L Q S K S 0 0 1 2 0 2 1 1 0 0 4 1 0 0 0 3 1 0 0 2 0 0 18 0 1945.0004 P35579 P35579 1278 1295 MYH9 Myosin-9 yes yes 2 8.3078E-17 252.01 By MS/MS 2 0 1 1 203160 203160 0 9097 824 9403 22475 18012 18012 1 68718 0 LQVEQEENR ESSQYLTRITIAPQKLQVEQEENRFSFRHS TIAPQKLQVEQEENRFSFRHSTSVSSLAER K L Q N R F 0 1 1 0 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1143.552 Q9H1A4 Q9H1A4 906 914 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0011388 136.99 By MS/MS 2 0 1 1 0 0 0 9098 2420 9404 22476 18013 18013 1 0 0 LQVLQEGVLCR YAAGAFRWLEPSERRLQVLQEGVLCRTLAG SERRLQVLQEGVLCRTLAGCWPLRLLATPG R L Q C R T 0 1 0 0 1 2 1 1 0 0 3 0 0 0 0 0 0 0 0 2 0 0 11 0 1313.7126 Q9Y3P4 Q9Y3P4 193 203 RHBDD3 Rhomboid domain-containing protein 3 yes yes 2 0.0065677 109.16 By MS/MS 7 0 1 1 0 0 0 9099 2881 9405 22477 18014 18014 1 0 0 LQVTEHLPEK RKALHELKLEEWKGRLQVTEHLPEKIESSL EWKGRLQVTEHLPEKIESSLQEDEPENDAK R L Q E K I 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 0 1 0 0 1 0 0 10 0 1192.6452 Q9NPL8 Q9NPL8 240 249 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2;3 0.0028018 110.53 By MS/MS 8 0 2 2 1000000 1000000 0 9100 2534 9406 22478;22479 18015;18016 18016 2 12625 0 LQVTNVLSQPLTQATVK PEGSASDTHEQAILRLQVTNVLSQPLTQAT VTNVLSQPLTQATVKLEHAKSVASRATVLQ R L Q V K L 1 0 1 0 0 3 0 0 0 0 3 1 0 0 1 1 3 0 0 3 0 0 17 0 1839.0466 P04844 P04844 290 306 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 1.904E-33 304.03 By MS/MS 4.2 2.32 1 1 1 1 1 5 1440700 1440700 0 9101 479 9407 22480;22481;22482;22483;22484 18017;18018;18019 18019 3 93561 0 LQVVDQPLPVR FHSPNPEIPALLDGRLQVVDQPLPVRGGNV LDGRLQVVDQPLPVRGGNVGINSFGFGGSN R L Q V R G 0 1 0 1 0 2 0 0 0 0 2 0 0 0 2 0 0 0 0 3 0 0 11 0 1262.7347 P49327 P49327 374 384 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.6252E-09 214.71 By MS/MS By MS/MS 2.78 1.31 2 2 2 2 1 5 4 65657000 64931000 725670 9102 946 9408 22485;22486;22487;22488;22489;22490;22491;22492;22493 18020;18021;18022;18023;18024;18025;18026;18027 18026 8 11228000 706870 LQWFCDR KKIIETPGIRARSARLQWFCDRCVANNQVE GIRARSARLQWFCDRCVANNQVETLEKLVE R L Q D R C 0 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 7 0 1023.4596 P42704 P42704 923 929 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.026089 107.66 By MS/MS 4 1.41 1 1 1 1 1 5 7297600 7297600 0 9103 886 9409 22494;22495;22496;22497;22498 18028;18029 18028 2 278430 0 LQYEGIFIK VKIHEATGMPAGKQKLQYEGIFIKDSNSLA PAGKQKLQYEGIFIKDSNSLAYYNMANGAV K L Q I K D 0 0 0 0 0 1 1 1 0 2 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1109.6121 Q15459 Q15459 757 765 SF3A1 Splicing factor 3A subunit 1 yes yes 2 0.027537 85.67 By MS/MS 4 0 1 1 293130 293130 0 9104 1515 9410 22499 18030 18030 1 27586 0 LQYLIDLGR GHSFRRQYKPLSLNRLQYLIDLGRVDPSQP PLSLNRLQYLIDLGRVDPSQPIDLTQLVNG R L Q G R V 0 1 0 1 0 1 0 1 0 1 3 0 0 0 0 0 0 0 1 0 0 0 9 0 1089.6182 Q9P015 Q9P015 101 109 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.00069119 140.83 By MS/MS 9 0.816 1 1 1 3 1826400 1826400 0 9105 2659 9411 22500;22501;22502 18031 18031 1 26079 0 LQYYVPR LRHLQVIFGHLAASRLQYYVPRGFWKQFRL FGHLAASRLQYYVPRGFWKQFRLWGEPVNL R L Q P R G 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 2 1 0 0 7 0 937.50215 Q93008 Q93008 1659 1665 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.013677 125.86 By MS/MS 2.5 1.12 1 1 1 1 4 6955200 6955200 0 9106 2085 9412 22503;22504;22505;22506 18032;18033;18034;18035 18033 4 1819000 0 LRAEIDNVK NTKHEISEMNRMIQRLRAEIDNVKKQCANL NRMIQRLRAEIDNVKKQCANLQNAIADAEQ R L R V K K 1 1 1 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1056.5928 CON__P13647;P13647 CON__P13647 396 404 KRT5 Keratin, type II cytoskeletal 5 yes no 2;3 0.00031478 162.64 By MS/MS 4.33 0.471 2 1 3 3083400 3083400 0 + 9107 52 9413 22507;22508;22509 18036;18037 18037 2 269140 0 LRAEIDNVKK NTKHEISEMNRMIQRLRAEIDNVKKQCANL RMIQRLRAEIDNVKKQCANLQNAIADAEQR R L R K K Q 1 1 1 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1184.6877 CON__P13647;P13647 CON__P13647 396 405 KRT5 Keratin, type II cytoskeletal 5 yes no 2;3 2.3176E-05 162.64 By MS/MS By MS/MS 3.85 1.92 2 1 3 3 1 1 2 5 8 8809100 5342700 3466400 + 9108 52 9414 22510;22511;22512;22513;22514;22515;22516;22517;22518;22519;22520;22521;22522 18038;18039;18040;18041;18042;18043;18044;18045;18046;18047 18043 10 495990 1312300 LRAESEVPIVK LFKDKDRNWDDIESKLRAESEVPIVKTSSM IESKLRAESEVPIVKTSSMEISSILQELKR K L R V K T 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 11 1 1239.7187 Q5SW79;Q96L14 Q5SW79 1457 1467 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 2;3 0.00071797 118.9 By MS/MS 2 0 2 2 1354900 1354900 0 9109 1623 9415 22523;22524 18048;18049 18049 2 458280 0 LRAFHNEAQVNPER LAVNAAQDSTDLVAKLRAFHNEAQVNPERK KLRAFHNEAQVNPERKNLKWIGLDLSNGKP K L R E R K 2 2 2 0 0 1 2 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 14 1 1679.8492 P17987 P17987 467 480 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.0016376 110.77 By MS/MS 6.5 0.5 1 1 2 4971000 4971000 0 9110 648 9416 22525;22526 18050;18051 18050 2 37468 0 LRAVDFAER SVFRAHVKHRKGAARLRAVDFAERHGYIKG RKGAARLRAVDFAERHGYIKGIVKDIIHDP R L R E R H 2 2 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 1 1075.5774 P62917 P62917 29 37 RPL8 60S ribosomal protein L8 yes yes 2 0.0060854 126.31 By MS/MS 8 0 1 1 0 0 0 9111 1187 9417 22527 18052 18052 1 0 0 LRDFLLEHR DFSSRAREVISHIGKLRDFLLEHRKDYINA ISHIGKLRDFLLEHRKDYINAYSHTMSEYG K L R H R K 0 2 0 1 0 0 1 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 9 1 1197.6618 Q9P2W9 Q9P2W9 63 71 STX18 Syntaxin-18 yes yes 3 0.052103 67.334 By MS/MS 7 0 1 1 2014600 2014600 0 9112 2691 9418 22528 18053 18053 1 31626 0 LRDPAQQVR FPNLVDPWTPHLYARLRDPAQQVRKTAGLV PHLYARLRDPAQQVRKTAGLVMTHLILKDM R L R V R K 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 1 1081.5992 Q15021 Q15021 1101 1109 NCAPD2 Condensin complex subunit 1 yes yes 3 0.034976 82.645 By MS/MS 3 0 1 1 428040 428040 0 9113 1474 9419 22529 18054 18054 1 7831.9 0 LRDQLGTAK YDERIDRVETRITARLRDQLGTAKNANEMF TRITARLRDQLGTAKNANEMFRIFSRFNAL R L R A K N 1 1 0 1 0 1 0 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 1000.5665 Q14204 Q14204 568 576 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.00056936 159.28 By MS/MS 2.29 1.03 2 2 2 1 7 4144400 4144400 0 9114 1433 9420 22530;22531;22532;22533;22534;22535;22536 18055;18056;18057;18058 18057 4 1032800 0 LRDVLQQR NLSRELLQESALIRKLRDVLQQRLIKFFID ESALIRKLRDVLQQRLIKFFIDQSKKDAEK K L R Q R L 0 2 0 1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 1 1026.5934 Q12931 Q12931 414 421 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.04064 81.296 By MS/MS 4.5 0.5 1 1 2 564360 564360 0 9115 1340 9421 22537;22538 18059 18059 1 10790 0 LRECELSPGVNR SVNIKEICWNLQNIRLRECELSPGVNRDLT NIRLRECELSPGVNRDLTRRVRNINGITQH R L R N R D 0 2 1 0 1 0 2 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 12 1 1428.7143 Q9BXP5 Q9BXP5 487 498 SRRT Serrate RNA effector molecule homolog yes yes 2 0.0036559 130.01 By MS/MS 3.5 0.5 1 1 2 551500 551500 0 9116 2358 9422 22539;22540 18060;18061 18060 2 30162 0 LREDLER DGKYSQVLANGLDNKLREDLERLKKIRAHR LANGLDNKLREDLERLKKIRAHRGLRHFWG K L R E R L 0 2 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 929.49304 P62269 P62269 107 113 RPS18 40S ribosomal protein S18 yes yes 3 0.0070217 132.57 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 19258000 19193000 65087 9117 1149 9423 22541;22542;22543 18062;18063;18064 18064 3 498260 148420 LREDLERLK DGKYSQVLANGLDNKLREDLERLKKIRAHR NGLDNKLREDLERLKKIRAHRGLRHFWGLR K L R L K K 0 2 0 1 0 0 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 2 1170.6721 P62269 P62269 107 115 RPS18 40S ribosomal protein S18 yes yes 2 0.014654 122.19 By MS/MS 9 0 1 1 380280 380280 0 9118 1149 9424 22544 18065 18065 1 7483.9 0 LREDNKTDEGPDTPSYNR ILKDTEAVMAFLEAKLREDNKTDEGPDTPS DNKTDEGPDTPSYNRDNSISPESDVDTAST K L R N R D 0 2 2 3 0 0 2 1 0 0 1 1 0 0 2 1 2 0 1 0 0 0 18 2 2105.9614 Q5SW79 Q5SW79 908 925 CEP170 Centrosomal protein of 170 kDa yes yes 3 4.5286E-07 204.9 By MS/MS 2 0 1 1 1038100 1038100 0 9119 1623 9425 22545 18066 18066 1 351130 0 LREEARPR LRRLRGEARLRDEERLREEARPRGEERLRE RLRDEERLREEARPRGEERLREEARLREDA R L R P R G 1 3 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 2 1025.573 Q8NC56 Q8NC56 50 57 LEMD2 LEM domain-containing protein 2 yes yes 3 0.036646 85.161 By MS/MS 6 0 1 1 1177200 1177200 0 9120 1948 9426 22546 18067 18067 1 8092.6 0 LREEEQQQHR VTESTRPVYLKKLKKLREEEQQQHRSGGRG KKLKKLREEEQQQHRSGGRGNKTRNSNNNN K L R H R S 0 2 0 0 0 3 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 10 1 1351.6593 Q9Y2U8 Q9Y2U8 46 55 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 0.00091827 105.17 By MS/MS 4 0 1 1 252730 252730 0 9121 2844 9427 22547 18068 18068 1 23784 0 LREEGTKYR CATTIAYPHEVVRTRLREEGTKYRSFFQTL EVVRTRLREEGTKYRSFFQTLSLLVQEEGY R L R Y R S 0 2 0 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 2 1150.6095 Q96CQ1 Q96CQ1 254 262 SLC25A36 Solute carrier family 25 member 36 yes yes 3 0.011858 80.916 By MS/MS 7.5 0.5 1 1 2 805020 805020 0 9122 2124 9428 22548;22549 18069 18069 1 11792 0 LREEIEELKR EGAQMNGIQPEEIGRLREEIEELKRNQELL EEIGRLREEIEELKRNQELLQSQLTEKDSM R L R K R N 0 2 0 0 0 0 4 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 2 1313.7303 O60763 O60763 735 744 USO1 General vesicular transport factor p115 yes yes 3 0.0017938 103.31 By MS/MS 4 0 1 1 1637700 1637700 0 9123 276 9429 22550 18070 18070 1 154120 0 LREENDIAR QHLEDDRHKTEKIQKLREENDIARGKLEEE TEKIQKLREENDIARGKLEEEKKRSEELLS K L R A R G 1 2 1 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1114.5731 Q53EZ4 Q53EZ4 307 315 CEP55 Centrosomal protein of 55 kDa yes yes 2 0.012378 114.89 By MS/MS 6 0 1 1 2131500 2131500 0 9124 1586 9430 22551 18071 18071 1 14653 0 LREEQEKVVTNCQER PAPALVPLRAPDVARLREEQEKVVTNCQER LREEQEKVVTNCQERIQHWKKVDNDYNALR R L R E R I 0 2 1 0 1 2 4 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 15 2 1916.9374 O94763 O94763 33 47 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 3 0.038512 85.493 By MS/MS 5 0 1 1 2210500 2210500 0 9125 363 9431 22552 18072 18072 1 22170 0 LREFVFCNK YKKKLWKKTPARKKRLREFVFCNKTQSKLL PARKKRLREFVFCNKTQSKLLDKMTTSFWK R L R N K T 0 1 1 0 1 0 1 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 9 1 1211.6121 Q9NZE8 Q9NZE8 144 152 MRPL35 39S ribosomal protein L35, mitochondrial yes yes 2 0.040687 103.55 By MS/MS 10 0 1 1 962670 962670 0 9126 2648 9432 22553 18073 18073 1 51884 0 LREIEENQKR EERKKVETEAKIKQKLREIEENQKRIEKLE KIKQKLREIEENQKRIEKLEEYITTSKQSL K L R K R I 0 2 1 0 0 1 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 10 2 1313.7052 Q14683 Q14683 425 434 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.0011651 116.55 By MS/MS 3 0 1 1 904320 904320 0 9127 1451 9433 22554 18074 18074 1 16547 0 LRELFGKDEQQR PYVPEPYYPESGWDRLRELFGKDEQQRISK WDRLRELFGKDEQQRISKDLANICKTAATA R L R Q R I 0 2 0 1 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 12 2 1517.795 Q9NPL8 Q9NPL8 58 69 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 3 0.00033128 138.2 By MS/MS 8 0 1 1 1637200 1637200 0 9128 2534 9434 22555 18075 18075 1 20669 0 LRENKEFLEFR RYEGGYPALTEVMNKLRENKEFLEFRKARS VMNKLRENKEFLEFRKARSDMLLSRKNQLL K L R F R K 0 2 1 0 0 0 3 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 11 2 1479.7834 O75323 O75323 144 154 GBAS Protein NipSnap homolog 2 yes yes 3 0.012998 116.74 By MS/MS 8 0 1 1 2613300 2613300 0 9129 310 9435 22556 18076 18076 1 32992 0 LREQGTESR IVGTTRKLYEKKLLKLREQGTESRSSTPLP EKKLLKLREQGTESRSSTPLPTISSSAENT K L R S R S 0 2 0 0 0 1 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 9 1 1074.5418 P42166;P42167 P42166 149 157 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0010422 155.58 By MS/MS By matching 6 0.707 1 2 1 3 1 3848500 3832900 15576 9130 875;876 9436 22557;22558;22559;22560 18077;18078;18079 18078 3 33239 15961 LREVVETPLLHPER VTYSDVGGCKEQIEKLREVVETPLLHPERF KLREVVETPLLHPERFVNLGIEPPKGVLLF K L R E R F 0 2 0 0 0 0 3 0 1 0 3 0 0 0 2 0 1 0 0 2 0 0 14 1 1686.9417 P35998 P35998 187 200 PSMC2 26S protease regulatory subunit 7 yes yes 3 0.0040719 99.941 By MS/MS 6.5 0.5 1 1 2 4790600 4790600 0 9131 831 9437 22561;22562 18080;18081 18080 2 47642 0 LRGSANAVR AIKGFRNAPVGIRHRLRGSANAVRIRAPQI VGIRHRLRGSANAVRIRAPQIGGSFAVWGG R L R V R I 2 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 1 942.53591 O60830 O60830 48 56 TIMM17B Mitochondrial import inner membrane translocase subunit Tim17-B yes yes 3 0.019556 84.213 By MS/MS 9.5 0.5 1 1 2 771680 771680 0 9132 281 9438 22563;22564 18082 18082 1 19378 0 LRHEEEER RLEENRLRMEEEAARLRHEEEERKRKELEV MEEEAARLRHEEEERKRKELEVQRQKELMR R L R E R K 0 2 0 0 0 0 4 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 1096.5261 Q6Y7W6 Q6Y7W6 875 882 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2;3 0.011466 141.52 By MS/MS 2.33 0.471 2 1 3 297460 297460 0 9133 1738 9439 22565;22566;22567 18083;18084;18085 18084 3 47430 0 LRHEILLSQSVR MMLVTSGAVAFGKQRLRHEILLSQSVRQAL KQRLRHEILLSQSVRQALHSGQNQLKEMAI R L R V R Q 0 2 0 0 0 1 1 0 1 1 3 0 0 0 0 2 0 0 0 1 0 0 12 1 1449.8416 P54886 P54886 127 138 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.00051718 147.58 By MS/MS 5.4 1.02 1 2 1 1 5 9320200 9320200 0 9134 1048 9440 22568;22569;22570;22571;22572 18086;18087 18086 2 119960 0 LRIDYER ETINKLKVQEQELTRLRIDYERVSQERTVK VQEQELTRLRIDYERVSQERTVKDQDITRF R L R E R V 0 2 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 7 1 963.51378 P15924 P15924 1538 1544 DSP Desmoplakin yes yes 3 0.033001 101.6 By MS/MS 3 0 1 1 181160 0 181160 9135 628 9441 22573 18088 18088 1 0 23059 LRLECADLLETR LTAGEHNKACSLLGKLRLECADLLETRGVV LGKLRLECADLLETRGVVLRDPTLFSFLWV K L R T R G 1 2 0 1 1 0 2 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 12 1 1487.7766 Q6PI48 Q6PI48 455 466 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2;3 0.00021935 169.21 By MS/MS 5 0 2 2 4988900 4988900 0 9136 1717 9442 22574;22575 18089;18090 18089 2 50036 0 LRLEEEQKEEEER LESQREAEWKKEEERLRLEEEQKEEEERKA ERLRLEEEQKEEEERKAREEQAQREHEEYL R L R E R K 0 2 0 0 0 1 7 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 13 2 1715.8326 Q96HY6 Q96HY6 163 175 DDRGK1 DDRGK domain-containing protein 1 yes yes 3 0.0059802 97.631 By MS/MS 7 0 1 1 3745700 3745700 0 9137 2169 9443 22576 18091 18091 1 58801 0 LRNEKEQELDTLK PLWYLTKEKKDELCRLRNEKEQELDTLKRK CRLRNEKEQELDTLKRKSPSDLWKEDLATF R L R L K R 0 1 1 1 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 13 2 1614.8577 P11388 P11388 1147 1159 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0048604 101.53 By MS/MS 3 0.816 1 1 1 3 423460 423460 0 9138 578 9444 22577;22578;22579 18092 18092 1 25471 0 LRPEPCISLEPR ESPLQRCPPPAPRPRLRPEPCISLEPRPRP RPRLRPEPCISLEPRPRPLPRQLSEPCLYP R L R P R P 0 2 0 0 1 0 2 0 0 1 2 0 0 0 3 1 0 0 0 0 0 0 12 1 1465.7711 Q5T749 Q5T749 408 419 KPRP Keratinocyte proline-rich protein yes yes 3 0.040267 111.94 By MS/MS 3 0 1 1 337820 0 337820 9139 1636 9445 22580 18093;18094 18093 2 0 42999 LRPESALAQAQK DQVEEAVADFDECIRLRPESALAQAQKCFA CIRLRPESALAQAQKCFALYRQAYTGNNSS R L R Q K C 3 1 0 0 0 2 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 1 1310.7306 O94826 O94826 430 441 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.054126 90.05 By MS/MS 5.5 0.5 1 1 2 3459700 3459700 0 9140 369 9446 22581;22582 18095 18095 1 33990 0 LRPITAQLK KFLADMRRPSSVLRRLRPITAQLKIDISPA SSVLRRLRPITAQLKIDISPAPENPHYCLT R L R L K I 1 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 9 1 1038.655 Q96N67 Q96N67 502 510 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 0.0035317 112.41 By MS/MS 2.33 0.471 2 1 3 1863800 1863800 0 9141 2201 9447 22583;22584;22585 18096;18097 18096 2 586050 0 LRPVAAEVYGTER LDGGFIYEAGLAPYKLRPVAAEVYGTERQP YKLRPVAAEVYGTERQPRTHYYAVAVVKKG K L R E R Q 2 2 0 0 0 0 2 1 0 0 1 0 0 0 1 0 1 0 1 2 0 0 13 1 1459.7783 P02788 P02788 93 105 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 3 0.0097423 94.402 By MS/MS 1 0 1 1 166190 0 166190 9142 459 9448 22586 18098 18098 1 0 166190 LRQEAKER REAELQKVRKAEEERLRQEAKEREKERILQ RKAEEERLRQEAKEREKERILQEHEQIKKK R L R E R E 1 2 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1028.5727 Q14152 Q14152 612 619 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0029032 161.02 By MS/MS By matching 2.67 0.943 1 1 3 1 5 1 2718000 2703100 14901 9143 1422 9449 22587;22588;22589;22590;22591;22592 18099;18100;18101 18099 3 64833 1896.6 LRQEEREQEQR NQAENRRLHELRIARLRQEEREQEQRQALE RIARLRQEEREQEQRQALEQARKAEEVQAW R L R Q R Q 0 3 0 0 0 3 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 2 1499.7441 Q9BYN8 Q9BYN8 124 134 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2;3 3.0026E-18 267.29 By MS/MS 8.5 0.5 2 2 4 7639500 7639500 0 9144 2374 9450 22593;22594;22595;22596 18102;18103;18104 18103 3 128020 0 LRQYAEK NEEEDKEAAQLREERLRQYAEKKAKKPALV AAQLREERLRQYAEKKAKKPALVAKSSILL R L R E K K 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 906.49232 P29692 P29692 179 185 EEF1D Elongation factor 1-delta yes yes 3 0.010187 113.7 By MS/MS 7 0 1 1 414960 414960 0 9145 760 9451 22597 18105 18105 1 6514.1 0 LRSEIDNVK NSKIEISELNRVIQRLRSEIDNVKKQISNL NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R L R V K K 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1072.5877 CON__P04264;P04264;CON__Q922U2 P04264 408 416 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.00074676 140.11 By matching By MS/MS 4 2.73 3 2 2 2 2 1 1 1 7 7 6714300 5253600 1460700 + 9146 471;45;74 9452 22598;22599;22600;22601;22602;22603;22604;22605;22606;22607;22608;22609;22610;22611 18106;18107;18108 18107 3 602510 1334300 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1200.6826 CON__P04264;P04264;CON__Q922U2 P04264 408 417 KRT1 Keratin, type II cytoskeletal 1 no no 2;3;4 5.0093E-08 192.64 By MS/MS By MS/MS 3.9 1.85 5 6 6 5 8 6 3 19 20 154600000 100970000 53631000 + 9147 471;45;74 9453 22612;22613;22614;22615;22616;22617;22618;22619;22620;22621;22622;22623;22624;22625;22626;22627;22628;22629;22630;22631;22632;22633;22634;22635;22636;22637;22638;22639;22640;22641;22642;22643;22644;22645;22646;22647;22648;22649;22650 18109;18110;18111;18112;18113;18114;18115;18116;18117;18118;18119;18120;18121;18122;18123;18124;18125;18126;18127;18128;18129;18130;18131;18132;18133;18134;18135;18136;18137;18138 18113 30 6330300 22080000 LRSIPLDEGEDEAQR DVLSTDMIFNNFLARLRSIPLDEGEDEAQR LRSIPLDEGEDEAQRRRKGKEDEGEEAASP R L R Q R R 1 2 0 2 0 1 3 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 15 1 1726.8486 Q14204 Q14204 2382 2396 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0073208 139.21 By MS/MS 1 0 1 1 183160 183160 0 9148 1433 9454 22651 18139 18139 1 44135 0 LRTASVPLDAVR IQELRANVEEERAARLRTASVPLDAVRAEW AARLRTASVPLDAVRAEWERTCGPYHKQRL R L R V R A 2 2 0 1 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 2 0 0 12 1 1296.7514 Q96DV4 Q96DV4 125 136 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.043242 92.611 By MS/MS 7 0 1 1 1027800 1027800 0 9149 2138 9455 22652 18140 18140 1 16135 0 LRTFYEK ATGCQKLIEVDDERKLRTFYEKRMATEVAA IEVDDERKLRTFYEKRMATEVAADALGEEW K L R E K R 0 1 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 7 1 955.51272 P62753 P62753 24 30 RPS6 40S ribosomal protein S6 yes yes 3 0.047521 78.334 By MS/MS 8 0 1 1 356620 356620 0 9150 1169 9456 22653 18141 18141 1 4502.2 0 LSAAVTEAFVR SSLDWDRACFTMDPKLSAAVTEAFVRLHEE MDPKLSAAVTEAFVRLHEEGIIYRSTRLVN K L S V R L 3 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 11 0 1162.6346 P26640 P26640 451 461 VARS Valine--tRNA ligase yes yes 2 2.357E-05 160.53 By MS/MS 3.5 0.5 1 1 2 1095600 1095600 0 9151 735 9457 22654;22655 18142 18142 1 66971 0 LSAEKVEIATLTR ALAIKVLNKTMDVSKLSAEKVEIATLTREN SKLSAEKVEIATLTRENGKTVIRVLKQKEV K L S T R E 2 1 0 0 0 0 2 0 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 1 1429.814 P25789 P25789 206 218 PSMA4 Proteasome subunit alpha type-4 yes yes 2;3 1.8479E-07 221.09 By MS/MS By matching 8.6 0.8 3 1 1 4 1 19780000 19755000 25271 9152 727 9458 22656;22657;22658;22659;22660 18143;18144 18144 2 256790 34101 LSAETLQQVNR AFAHKDRDVQDETYRLSAETLQQVNRLLAC ETYRLSAETLQQVNRLLACYKGTHNFHNFT R L S N R L 1 1 1 0 0 2 1 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 11 0 1257.6677 Q9Y606 Q9Y606 224 234 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 5.0682E-09 204.34 By MS/MS 7 0 1 1 3279200 3279200 0 9153 2929 9459 22661 18145 18145 1 51477 0 LSAFAFKQE LSKKQKPLDFSTNQKLSAFAFKQE______ FSTNQKLSAFAFKQE_______________ K L S Q E - 2 0 0 0 0 1 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 9 1 1039.5338 O75717 O75717 1121 1129 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.00047517 162.88 By MS/MS 3 0 1 1 417070 417070 0 9154 342 9460 22662 18146 18146 1 7631.1 0 LSANQQNILK RGSNSLPLLRSVLDKLSANQQNILKFIACN SVLDKLSANQQNILKFIACNEIFLMPATVF K L S L K F 1 0 2 0 0 2 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1127.6299 P57088 P57088 149 158 TMEM33 Transmembrane protein 33 yes yes 2 2.494E-05 164.68 By MS/MS By matching 6.75 3.34 1 1 2 3 1 15255000 15219000 36442 9155 1078 9461 22663;22664;22665;22666 18147;18148;18149 18148 3 269780 83099 LSATESIVEIVK SSTNLINEINGVSEKLSATESIVEIVKQEV SEKLSATESIVEIVKQEVLPLTLELEILEN K L S V K Q 1 0 0 0 0 0 2 0 0 2 1 1 0 0 0 2 1 0 0 2 0 0 12 0 1287.7286 O43432 O43432 366 377 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 7.8632E-10 225.01 By MS/MS 2 0 1 1 241160 241160 0 9156 210 9462 22667 18150 18150 1 81572 0 LSDADLAGPLQK QLLASFLANNPFSCKLSDADLAGPLQKETQ SCKLSDADLAGPLQKETQKLQEMRAQRRTA K L S Q K E 2 0 0 2 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 0 0 0 12 0 1226.6507 Q15021 Q15021 441 452 NCAPD2 Condensin complex subunit 1 yes yes 2 3.2342E-05 172.98 By MS/MS 3 0 1 1 1031500 1031500 0 9157 1474 9463 22668 18151 18151 1 18874 0 LSDEDLFK ATLTVTNFFKQEAERLSDEDLFKFLADMRR FKQEAERLSDEDLFKFLADMRRPSSLLRRL R L S F K F 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 965.47058 Q96HP0 Q96HP0 467 474 DOCK6 Dedicator of cytokinesis protein 6 no no 2 0.029286 90.37 By MS/MS 2 0 1 1 286270 286270 0 9158 2166 9464 22669 18152 18152 1 96827 0 LSDEDLYK ATLTVTNFFKQEGDRLSDEDLYKFLADMRR FKQEGDRLSDEDLYKFLADMRRPSSVLRRL R L S Y K F 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 981.46549 Q96N67 Q96N67 480 487 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.036301 87.696 By MS/MS 2 0 1 1 670620 670620 0 9159 2201 9465 22670 18153 18153 1 226830 0 LSDETLIDIMTR DDQVKKIDKYLYAMRLSDETLIDIMTRFRK AMRLSDETLIDIMTRFRKEMKNGLSRDFNP R L S T R F 0 1 0 2 0 0 1 0 0 2 2 0 1 0 0 1 2 0 0 0 0 0 12 0 1405.7123 P19367 P19367 31 42 HK1 Hexokinase-1 yes yes 2 2.0806E-06 196.88 By MS/MS 4 0 1 1 104490 104490 0 9160 660 9466 22671 18154 18154 1 9833.2 0 LSDETLLEISK HDQVQKVDQYLYHMRLSDETLLEISKRFRK YHMRLSDETLLEISKRFRKEMEKGLGATTH R L S S K R 0 0 0 1 0 0 2 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 11 0 1246.6656 P52789 P52789 31 41 HK2 Hexokinase-2 yes yes 2 0.039568 75.416 By MS/MS 4 0 1 1 582530 582530 0 9161 1023 9467 22672 18155 18155 1 54820 0 LSDETLLEISKR HDQVQKVDQYLYHMRLSDETLLEISKRFRK HMRLSDETLLEISKRFRKEMEKGLGATTHP R L S K R F 0 1 0 1 0 0 2 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 12 1 1402.7668 P52789 P52789 31 42 HK2 Hexokinase-2 yes yes 2;3 0.0048724 104.07 By MS/MS 4 0 2 2 3230500 3230500 0 9162 1023 9468 22673;22674 18156;18157 18157 2 304010 0 LSDGFNGADLR PITKHGEIDYEAIVKLSDGFNGADLRNVCT AIVKLSDGFNGADLRNVCTEAGMFAIRADH K L S L R N 1 1 1 2 0 0 0 2 0 0 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1163.5571 P62333 P62333 334 344 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.00012045 150.09 By MS/MS By matching 8 1.41 2 1 2 1 5847900 5818500 29333 9163 1159 9469 22675;22676;22677 18158;18159 18158 2 99269 52827 LSDGFVAAEAK ALLSVDPGRFQDSWRLSDGFVAAEAKTILP DSWRLSDGFVAAEAKTILPHRARSRPDLMD R L S A K T 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 0 1106.5608 Q6R327 Q6R327 364 374 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 5.4154E-07 178.84 By MS/MS 2 0 1 1 0 0 0 9164 1724 9470 22678 18160 18160 1 0 0 LSDGVAVLK TSEYEKEKLNERLAKLSDGVAVLKVGGTSD NERLAKLSDGVAVLKVGGTSDVEVNEKKDR K L S L K V 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 900.52803 P10809 P10809 397 405 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0015156 127.46 By MS/MS 6.33 1.97 1 1 1 1 1 1 6 141140000 141140000 0 9165 569 9471 22679;22680;22681;22682;22683;22684 18161;18162;18163;18164;18165;18166;18167 18166 7 1041700 0 LSDLDSETR DPEINTKKINPENSKLSDLDSETRSMVEKM NPENSKLSDLDSETRSMVEKMMYDQRQKSM K L S T R S 0 1 0 2 0 0 1 0 0 0 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1034.488 Q9Y266 Q9Y266 276 284 NUDC Nuclear migration protein nudC yes yes 2 0.00021091 155.58 By MS/MS 6.5 0.5 1 1 2 3398200 3398200 0 9166 2816 9472 22685;22686 18168 18168 1 50179 0 LSDLDYMQFIR RWLIKEELEEMLVEKLSDLDYMQFIRLLEK LVEKLSDLDYMQFIRLLEKLLTSQCGAAEE K L S I R L 0 1 0 2 0 1 0 0 0 1 2 0 1 1 0 1 0 0 1 0 0 0 11 0 1399.6806 P82933 P82933 213 223 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.00017603 148.91 By MS/MS 7 0 1 1 138970 138970 0 9167 1239 9473 22687 18169 18169 1 2181.6 0 LSDVFGSVR IFTDVALKFEHQLIKLSDVFGSVRTHGIAV EHQLIKLSDVFGSVRTHGIAVSPCGAYLAI K L S V R T 0 1 0 1 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 9 0 978.51345 Q9UKN8 Q9UKN8 468 476 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 0.00094065 134.77 By MS/MS 4 0 1 1 1175400 1175400 0 9168 2762 9474 22688 18170 18170 1 110620 0 LSDYDSSEEAIR QRNLCLHLKAEALIKLSDYDSSEEAIRTLD LIKLSDYDSSEEAIRTLDQISDADNIPGLL K L S I R T 1 1 0 2 0 0 2 0 0 1 1 0 0 0 0 3 0 0 1 0 0 0 12 0 1383.6154 Q6PGP7 Q6PGP7 363 374 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 1.8159E-08 206.49 By MS/MS 3 0 1 1 769470 769470 0 9169 1716 9475 22689 18171 18171 1 14079 0 LSDYLFTLAR QMGETDANVAKFLNRLSDYLFTLARYAAMK KFLNRLSDYLFTLARYAAMKEGNQEKIYMK R L S A R Y 1 1 0 1 0 0 0 0 0 0 3 0 0 1 0 1 1 0 1 0 0 0 10 0 1197.6394 Q96EY8 Q96EY8 216 225 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 2 1.9173E-07 200.05 By MS/MS 8.5 0.5 1 1 2 452700 452700 0 9170 2152 9476 22690;22691 18172;18173;18174 18174 3 6713.6 0 LSDYSIGPNSK QRLLFKGKALADGKRLSDYSIGPNSKLNLV DGKRLSDYSIGPNSKLNLVVKPLEKVLLEE R L S S K L 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 3 0 0 1 0 0 0 11 0 1179.5772 P11441 P11441 56 66 UBL4A Ubiquitin-like protein 4A yes yes 2 0.0041014 106.29 By MS/MS 9.5 0.5 1 1 2 435770 435770 0 9171 579 9477 22692;22693 18175;18176 18176 2 17511 0 LSEADNR AQKREDAVSKEVTRKLSEADNRKMSRKEKD VSKEVTRKLSEADNRKMSRKEKDERILWKK K L S N R K 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 803.37735 Q9UNL2 Q9UNL2 104 110 SSR3 Translocon-associated protein subunit gamma yes yes 2 0.0079858 143.37 By MS/MS 9 0 1 1 2772700 2772700 0 9172 2790 9478 22694 18177 18177 1 54567 0 LSEDSVSVLVLR DTIYLLEGVCKNDPKLSEDSVSVLVLRCLT DPKLSEDSVSVLVLRCLTEALPENRLSRLL K L S L R C 0 1 0 1 0 0 1 0 0 0 3 0 0 0 0 3 0 0 0 3 0 0 12 0 1315.7347 P50748 P50748 378 389 KNTC1 Kinetochore-associated protein 1 yes yes 2 3.1528E-05 173.24 By MS/MS 1 0 1 1 90843 90843 0 9173 979 9479 22695 18178;18179 18178 2 21890 0 LSEDYGVLK LGPLNIPLLADVTRRLSEDYGVLKTDEGIA ADVTRRLSEDYGVLKTDEGIAYRGLFIIDG R L S L K T 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 0 1022.5284 P32119 P32119 111 119 PRDX2 Peroxiredoxin-2 yes yes 2 8.6386E-05 164.72 By MS/MS 9 0 1 1 982710 982710 0 9174 796 9480 22696 18180 18180 1 19340 0 LSEDYGVLKTDEGIAYR LGPLNIPLLADVTRRLSEDYGVLKTDEGIA EDYGVLKTDEGIAYRGLFIIDGKGVLRQIT R L S Y R G 1 1 0 2 0 0 2 2 0 1 2 1 0 0 0 1 1 0 2 1 0 0 17 1 1927.9527 P32119 P32119 111 127 PRDX2 Peroxiredoxin-2 yes yes 3 0.0020175 110.6 By MS/MS By MS/MS 5.33 2.62 1 1 1 2 1 927610 767220 160390 9175 796 9481 22697;22698;22699 18181;18182;18183 18181 2 27375 20415 LSEECNSLSDVLDAFSK VLTKETKPNRISSRKLSEECNSLSDVLDAF EECNSLSDVLDAFSKAPTFPSSNYFTAMWT K L S S K A 1 0 1 2 1 0 2 0 0 0 3 1 0 1 0 4 0 0 0 1 0 0 17 0 1912.8724 Q9NYY8 Q9NYY8 159 175 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 6.0481E-11 262.37 By MS/MS 6 0 1 1 233460 233460 0 9176 2640 9482 22700 18184;18185 18185 2 1604.9 0 LSEETKVALTK PAAITSEIRKKILSKLSEETKVALTKLHNS ILSKLSEETKVALTKLHNSLNEKSIEDFIS K L S T K L 1 0 0 0 0 0 2 0 0 0 2 2 0 0 0 1 2 0 0 1 0 0 11 1 1217.6867 O94874 O94874 615 625 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0020085 133.42 By MS/MS 4 0 1 1 796030 796030 0 9177 372 9483 22701 18186 18186 1 74912 0 LSEGDLLAEIETDK TMGTVQRWEKKVGEKLSEGDLLAEIETDKA KLSEGDLLAEIETDKATIGFEVQEEGYLAK K L S D K A 1 0 0 2 0 0 3 1 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 0 1531.7617 P10515 P10515 246 259 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0089241 107.09 By MS/MS 5 0 1 1 0 0 0 9178 561 9484 22702 18187 18187 1 0 0 LSEHTEDLPK RENPCQEQGDVIQIKLSEHTEDLPKADGQG VIQIKLSEHTEDLPKADGQGSTTMLVDTVF K L S P K A 0 0 0 1 0 0 2 0 1 0 2 1 0 0 1 1 1 0 0 0 0 0 10 0 1167.5772 Q9H3P2 Q9H3P2 482 491 NELFA Negative elongation factor A yes yes 3 0.048885 68.847 By MS/MS 5 0 1 1 826730 826730 0 9179 2439 9485 22703 18188 18188 1 8291.7 0 LSEIQALTLTK KNCDISVHLVEVSQKLSEIQALTLTKEKVP VSQKLSEIQALTLTKEKVPLERNAGSPVYM K L S T K E 1 0 0 0 0 1 1 0 0 1 3 1 0 0 0 1 2 0 0 0 0 0 11 0 1215.7075 Q7L592 Q7L592 161 171 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.00012216 149.94 By MS/MS 7 0 1 1 441220 441220 0 9180 1764 9486 22704 18189 18189 1 6926.4 0 LSELAVEK IKYASRSRKLILAQKLSELAVEKAAELTAT KLILAQKLSELAVEKAAELTATQVEEEEEE K L S E K A 1 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 887.4964 O75717 O75717 812 819 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.010393 110.31 By MS/MS 4 0.816 1 1 1 3 1447700 1447700 0 9181 342 9487 22705;22706;22707 18190 18190 1 55802 0 LSELDDR IMRVNVDKVLERDQKLSELDDRADALQAGA KVLERDQKLSELDDRADALQAGASQFETSA K L S D R A 0 1 0 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 846.40831 Q15836;P63027;P23763 Q15836 43 49 VAMP3;VAMP2;VAMP1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 yes no 2 0.01391 125.25 By MS/MS 10 0 1 1 650140 650140 0 9182 1537 9488 22708 18191 18191 1 35040 0 LSELLPEEVEAEVK CLQKVGDRKNYASAKLSELLPEEVEAEVKA KLSELLPEEVEAEVKAAAEISMGTEVSEED K L S V K A 1 0 0 0 0 0 5 0 0 0 3 1 0 0 1 1 0 0 0 2 0 0 14 0 1583.8294 Q9Y2X3 Q9Y2X3 222 235 NOP58 Nucleolar protein 58 yes yes 2 0.0004506 147.28 By MS/MS 5.5 0.5 1 1 2 1355800 1355800 0 9183 2847 9489 22709;22710 18192 18192 1 11629 0 LSELQLR GEHANDYAEIAAKDKLSELQLRVRQLVEQV AEIAAKDKLSELQLRVRQLVEQVEQIQKEQ K L S L R V 0 1 0 0 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 857.49707 Q9BVK6 Q9BVK6 161 167 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 0.025527 108.09 By MS/MS 8.5 0.5 1 1 2 1164800 1164800 0 9184 2334 9490 22711;22712 18193 18193 1 21219 0 LSENVIDR EADENENITVVKGIRLSENVIDRMKESSPS TVVKGIRLSENVIDRMKESSPSGSKSQRYS R L S D R M 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 944.49271 Q9NX63 Q9NX63 28 35 CHCHD3 MICOS complex subunit MIC19 yes yes 2 0.0029993 134.77 By MS/MS By matching 8 0 2 1 1 2129300 2080600 48686 9185 2621 9491 22713;22714 18194 18194 1 26267 65700 LSEPEEELLQQFK GSNHTYLKNTYNKPKLSEPEEELLQQFKRE PKLSEPEEELLQQFKREEVSPTGSFSAHYL K L S F K R 0 0 0 0 0 2 4 0 0 0 3 1 0 1 1 1 0 0 0 0 0 0 13 0 1588.7985 Q9Y2U8 Q9Y2U8 446 458 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 6.8042E-06 198.62 By MS/MS 4.5 0.5 1 1 2 459060 459060 0 9186 2844 9492 22715;22716 18195 18195 1 37254 0 LSEQELQFR EQELKSEFEQNLSEKLSEQELQFRRLSQEQ QNLSEKLSEQELQFRRLSQEQVDNFTLDIN K L S F R R 0 1 0 0 0 2 2 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 9 0 1148.5826 Q16891 Q16891 517 525 IMMT MICOS complex subunit MIC60 yes yes 2 0.00011522 159.28 By MS/MS By MS/MS 4 0 2 1 1 3068000 2977100 90866 9187 1563 9493 22717;22718 18196;18197 18197 2 280170 193610 LSESQLSFR YGSDRRLAELSDYRRLSESQLSFRRSPTKS LSDYRRLSESQLSFRRSPTKSSLDYRRLPD R L S F R R 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 9 0 1065.5455 Q96PK6 Q96PK6 617 625 RBM14 RNA-binding protein 14 yes yes 2 0.045116 79.489 By MS/MS 5 0 1 1 570120 570120 0 9188 2210 9494 22719 18198 18198 0 5718 0 LSEVQASLHG MYHRAQKMGTPSCSRLSEVQASLHG_____ PSCSRLSEVQASLHG_______________ R L S H G - 1 0 0 0 0 1 1 1 1 0 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1039.5298 Q9NXW2 Q9NXW2 366 375 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0014511 112.11 By MS/MS 7 0 1 1 4545000 4545000 0 9189 2630 9495 22720 18199 18199 1 71348 0 LSEYPNVEELR RLEDYQRRLDTSSLKLSEYPNVEELRNLDL SSLKLSEYPNVEELRNLDLTKRKMIHEGPL K L S L R N 0 1 1 0 0 0 3 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 11 0 1347.667 Q9NZN5 Q9NZN5 1001 1011 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.013218 86.344 By MS/MS 2 0 1 1 164140 164140 0 9190 2652 9496 22721 18200 18200 1 55518 0 LSFEDFVTMTASR EAFREKDTAVQGNIRLSFEDFVTMTASRML IRLSFEDFVTMTASRML_____________ R L S S R M 1 1 0 1 0 0 1 0 0 0 1 0 1 2 0 2 2 0 0 1 0 0 13 0 1502.7075 Q9UBV8 Q9UBV8 270 282 PEF1 Peflin yes yes 2 0.017063 91.03 By MS/MS 8 0 1 1 0 0 0 9191 2707 9497 22722 18201 18201 1149 1 0 0 LSFHQTQVSQR LTKDVLLDVAYAYGKLSFHQTQVSQRLATD AYGKLSFHQTQVSQRLATDLLSLMPSLTSG K L S Q R L 0 1 0 0 0 3 0 0 1 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1329.6789 Q969Z0 Q969Z0 305 315 TBRG4 Protein TBRG4 yes yes 3 0.001428 131.12 By MS/MS 5.5 0.5 1 1 2 3178600 3178600 0 9192 2099 9498 22723;22724 18202 18202 1 23884 0 LSFISVGNK SSTNNNKDTKQKAGKLSFISVGNKFKTQLN KQKAGKLSFISVGNKFKTQLNLLLDKLRST K L S N K F 0 0 1 0 0 0 0 1 0 1 1 1 0 1 0 2 0 0 0 1 0 0 9 0 963.53893 Q9UM54 Q9UM54 638 646 MYO6 Unconventional myosin-VI yes yes 2 0.014159 93.143 By MS/MS 3 0 1 1 323080 323080 0 9193 2781 9499 22725 18203 18203 1 5911.5 0 LSFNPTQLEEQCHI EKFDKALKALPMHIRLSFNPTQLEEQCHI_ RLSFNPTQLEEQCHI_______________ R L S H I - 0 0 1 0 1 2 2 0 1 1 2 0 0 1 1 1 1 0 0 0 0 0 14 0 1714.7985 CON__P02754 CON__P02754 149 162 yes yes 2 3.8753E-07 206.36 By MS/MS By MS/MS 7.33 3.14 1 1 1 1 2 1 5 327340 136780 190560 + 9194 41 9500 22726;22727;22728;22729;22730;22731 18204;18205;18206;18207;18208;18209;18210 18210 7 7372 295600 LSFQHDPETSVLVLR PAAVVLQTKGSPESRLSFQHDPETSVLVLR LSFQHDPETSVLVLRKPGINVASDWSIHLR R L S L R K 0 1 0 1 0 1 1 0 1 0 3 0 0 1 1 2 1 0 0 2 0 0 15 0 1739.9206 Q14697 Q14697 915 929 GANAB Neutral alpha-glucosidase AB yes yes 3 0.00048297 154.1 By MS/MS 4.5 0.5 1 1 2 1069500 1069500 0 9195 1454 9501 22732;22733 18211 18211 1 79134 0 LSFSVSR VLHNGLGRYVQQLQRLSFSVSRDGASSRGA RYVQQLQRLSFSVSRDGASSRGAREFVERE R L S S R D 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 7 0 794.42865 Q8N983 Q8N983 29 35 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.0080496 143.11 By MS/MS By matching 9.33 0.471 2 1 2 1 3196300 3157000 39358 9196 1933 9502 22734;22735;22736 18212;18213 18212 2 111060 89749 LSGEAFDINK SCGGEGIVLQHNPWKLSGEAFDINKLIRDT HNPWKLSGEAFDINKLIRDTNSIKYKLPVH K L S N K L 1 0 1 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1092.5451 Q8TEQ6 Q8TEQ6 515 524 GEMIN5 Gem-associated protein 5 yes yes 2 2.1607E-05 182.39 By MS/MS 3 0 1 1 1982000 1982000 0 9197 2002 9503 22737 18214 18214 1 36264 0 LSGGLGAGSCR GSSGLGGGSSRTSCRLSGGLGAGSCRLGSA TSCRLSGGLGAGSCRLGSAGGLGSTLGGSS R L S C R L 1 1 0 0 1 0 0 4 0 0 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1033.4975 CON__Q04695;Q04695 CON__Q04695 31 41 KRT17 Keratin, type I cytoskeletal 17 yes no 2 8.6474E-06 176.6 By MS/MS By MS/MS 5.5 2.96 1 1 1 1 2 1 1 2 6 3859700 1125300 2734400 + 9198 57 9504 22738;22739;22740;22741;22742;22743;22744;22745 18215;18216;18217;18218;18219;18220 18218 6 19823 3466400 LSGSNPYTTVTPQIINSK IHKEAQRIAESNHIKLSGSNPYTTVTPQII SNPYTTVTPQIINSKWEKVQQLVPKRDHAL K L S S K W 0 0 2 0 0 1 0 1 0 2 1 1 0 0 2 3 3 0 1 1 0 0 18 0 1919 O43707 O43707 605 622 ACTN4 Alpha-actinin-4 yes yes 2 0.0057838 90.759 By MS/MS 4 0 1 1 985230 985230 0 9199 229 9505 22746 18221 18221 0 92717 0 LSGYEEALK LPVDQKCEHKLWKARLSGYEEALKIFQKIK KLWKARLSGYEEALKIFQKIKDEKSPEWSK R L S L K I 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1008.5128 Q14008 Q14008 25 33 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0064478 106.68 By MS/MS 2 0 1 1 1330500 1330500 0 9200 1417 9506 22747 18222 18222 1 450020 0 LSHETVTIELK ______________________________ FLMKLSHETVTIELKNGTQVHGTITGVDVS K L S L K N 0 0 0 0 0 0 2 0 1 1 2 1 0 0 0 1 2 0 0 1 0 0 11 0 1268.6976 P62314 P62314 10 20 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 2 0.00088116 123.96 By MS/MS 10 0 1 1 608200 608200 0 9201 1155 9507 22748 18223 18223 1 32780 0 LSHLLSEKPEDK SHDLDSNQAAMVLIRLSHLLSEKPEDKGLL LIRLSHLLSEKPEDKGLLIQDAHFHQLLCL R L S D K G 0 0 0 1 0 0 2 0 1 0 3 2 0 0 1 2 0 0 0 0 0 0 12 1 1394.7405 Q969Z0 Q969Z0 107 118 TBRG4 Protein TBRG4 yes yes 3 0.0047888 96.067 By MS/MS 5.5 0.5 1 1 2 2521400 2521400 0 9202 2099 9508 22749;22750 18224 18224 1 18397 0 LSIPTYGLQCTR PIEGSTTVFHSLASRLSIPTYGLQCTRAAP ASRLSIPTYGLQCTRAAPLDSIHSLAAYYI R L S T R A 0 1 0 0 1 1 0 1 0 1 2 0 0 0 1 1 2 0 1 0 0 0 12 0 1407.718 P49327 P49327 2264 2275 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00016608 152.7 By MS/MS 3 1.41 1 1 1 1 1 5 9802400 9802400 0 9203 946 9509 22751;22752;22753;22754;22755 18225;18226;18227;18228;18229 18227 5 2228000 0 LSISETYDLK LEKKYASSANLHLPKLSISETYDLKSVLGD LHLPKLSISETYDLKSVLGDVGITEVFSDR K L S L K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 1 0 0 0 10 0 1167.6023 CON__P34955 CON__P34955 313 322 yes yes 2 2.5288E-05 164.46 By MS/MS 9.5 0.5 1 1 2 700330 700330 0 + 9204 54 9510 22756;22757 18230 18230 1 29403 0 LSIVPVRR KEVATAIRGAIILAKLSIVPVRRGYWGNKI GAIILAKLSIVPVRRGYWGNKIGKPHTVPC K L S R R G 0 2 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 8 1 938.60253 P15880 P15880 160 167 RPS2 40S ribosomal protein S2 yes yes 2 0.0074876 130.04 By MS/MS 8.5 0.5 1 1 2 22289000 22289000 0 9205 627 9511 22758;22759 18231;18232 18231 2 287590 0 LSKEDIER TGKENKITITNDKGRLSKEDIERMVQEAEK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ R L S E R M 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 988.51892 P11142 P11142 510 517 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.003796 143.37 By MS/MS By MS/MS 7.14 1.81 4 2 2 2 2 2 12 2 103010000 102390000 625570 9206 572 9512 22760;22761;22762;22763;22764;22765;22766;22767;22768;22769;22770;22771;22772;22773 18233;18234;18235;18236;18237;18238;18239;18240 18235 8 1042900 525340 LSKEEIER TGKANKITITNDKGRLSKEEIERMVQEAEK ITNDKGRLSKEEIERMVQEAEKYKAEDEVQ R L S E R M 0 1 0 0 0 0 3 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1002.5346 P0DMV9;P0DMV8 P0DMV9 510 517 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.018724 131.11 By MS/MS By MS/MS 5.6 0.8 3 1 1 4 1 60746000 60452000 294400 9207 550 9513 22774;22775;22776;22777;22778 18241;18242;18243 18242 3 603410 247240 LSKLEPEPNTK EQRAIRVKRVVDKKRLSKLEPEPNTKTRES DKKRLSKLEPEPNTKTRESTSSEKVSQSPS R L S T K T 0 0 1 0 0 0 2 0 0 0 2 2 0 0 2 1 1 0 0 0 0 0 11 1 1254.682 Q9P2W9 Q9P2W9 166 176 STX18 Syntaxin-18 yes yes 2 0.049506 97.163 By MS/MS 7 0 1 1 1821800 1821800 0 9208 2691 9514 22779 18244 18244 1 28598 0 LSLAQHLR VAREMHSLRAEALYRLSLAQHLRDRVFWLP RAEALYRLSLAQHLRDRVFWLPHNMDFRGR R L S L R D 1 1 0 0 0 1 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 936.5505 O00411 O00411 783 790 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2;3 0.0021749 131.03 By MS/MS 3 0 2 2 645370 645370 0 9209 104 9515 22780;22781 18245;18246 18246 2 11809 0 LSLDDLLQR ETMLPLLLTAVSEGRLSLDDLLQRLHHNPR AVSEGRLSLDDLLQRLHHNPRRIFHLPPQE R L S Q R L 0 1 0 2 0 1 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 9 0 1071.5924 P27708 P27708 1723 1731 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0010987 132.76 By MS/MS 3 1.58 1 1 1 1 4 1031500 1031500 0 9210 745 9516 22782;22783;22784;22785 18247;18248;18249;18250 18248 4 280630 0 LSLDELHR DMDELKKEVSMDDHKLSLDELHRKYGTDLS VSMDDHKLSLDELHRKYGTDLSRGLTSARA K L S H R K 0 1 0 1 0 0 1 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 981.52434 P05023 P05023 46 53 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.021993 81.296 By MS/MS 4 0 1 1 1308500 1308500 0 9211 481 9517 22786 18251 18251 1 123130 0 LSLDGQNIYNACCTLR ALLQYADPVSAQHAKLSLDGQNIYNACCTL SLDGQNIYNACCTLRIDFSKLTSLNVKYNN K L S L R I 1 1 2 1 2 1 0 1 0 1 3 0 0 0 0 1 1 0 1 0 0 0 16 0 1896.8822 P26599 P26599 239 254 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 8.5244E-17 261.41 By MS/MS 6 0 1 1 1574800 1574800 0 9212 733 9518 22787 18252;18253 18252 2 10826 0 LSLDKVFR VTQLAQTTMRSELGKLSLDKVFRERESLNA MRSELGKLSLDKVFRERESLNASIVDAINQ K L S F R E 0 1 0 1 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 8 1 976.57057 Q9UJZ1 Q9UJZ1 141 148 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2;3 0.0062322 139.97 By MS/MS 7 0 2 2 4196700 4196700 0 9213 2755 9519 22788;22789 18254;18255 18254 2 65880 0 LSLELFGR MGMVISHDMLLGRWRLSLELFGRVFMEDVG MLLGRWRLSLELFGRVFMEDVGAEPGSILT R L S G R V 0 1 0 0 0 0 1 1 0 0 3 0 0 1 0 1 0 0 0 0 0 0 8 0 933.52837 O95071 O95071 2191 2198 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0027833 135.77 By MS/MS 3 1.41 1 1 1 1 1 5 947780 947780 0 9214 384 9520 22790;22791;22792;22793;22794 18256;18257;18258;18259 18258 4 201040 0 LSLFSDLPEDTELQR RGSALEMEFKRGRFRLSLFSDLPEDTELQR LSLFSDLPEDTELQRKLDHEIRMREGACKL R L S Q R K 0 1 0 2 0 1 2 0 0 0 4 0 0 1 1 2 1 0 0 0 0 0 15 0 1761.8785 Q9BST9 Q9BST9 29 43 RTKN Rhotekin yes yes 2 0.0014339 132.03 By MS/MS 5 0 1 1 120770 120770 0 9215 2310 9521 22795 18260 18260 1 1211.2 0 LSLLLNDISR RELEMIGFIENNVSKLSLLLNDISRKSEGL NNVSKLSLLLNDISRKSEGLSGRVLRKLPF K L S S R K 0 1 1 1 0 0 0 0 0 1 4 0 0 0 0 2 0 0 0 0 0 0 10 0 1142.6659 Q15645 Q15645 369 378 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 2 2.65E-05 163.66 By MS/MS 6.5 0.5 1 1 2 623130 623130 0 9216 1522 9522 22796;22797 18261 18261 1 6524.5 0 LSLMYAR DLLRLRRRFMRDQEKLSLMYARKGVAEQKR RFMRDQEKLSLMYARKGVAEQKREKEIKSE K L S A R K 1 1 0 0 0 0 0 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 7 0 852.45276 P78527 P78527 2739 2745 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.039458 97.602 By MS/MS 2 0 1 1 222230 222230 0 9217 1225 9523 22798 18262 18262 1 75167 0 LSLPQNETVADTTLTK GGKDMSIIQWKLVEKLSLPQNETVADTTLT SLPQNETVADTTLTKAPVSSTESVIQSNTP K L S T K A 1 0 1 1 0 1 1 0 0 0 3 1 0 0 1 1 4 0 0 1 0 0 16 0 1729.9098 Q9HC35 Q9HC35 868 883 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 4.7681E-05 198.29 By MS/MS 1.5 0.5 1 1 2 345650 345650 0 9218 2510 9524 22799;22800 18263 18263 1 94345 0 LSLVDLAGSER LYDVKSGTSGEKVGKLSLVDLAGSERATKT KVGKLSLVDLAGSERATKTGAAGDRLKEGS K L S E R A 1 1 0 1 0 0 1 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1158.6245 Q9NQT8 Q9NQT8 249 259 KIF13B Kinesin-like protein KIF13B yes yes 2 1.484E-06 184.71 By MS/MS 4 2 1 1 1 1 1 1 1 7 3544600 3544600 0 9219 2541 9525 22801;22802;22803;22804;22805;22806;22807 18264;18265;18266;18267;18268 18266 5 328420 0 LSNCANR KFEEMCGLVMGMFTRLSNCANRTILYDMYS LVMGMFTRLSNCANRTILYDMYSYVWDIKS R L S N R T 1 1 2 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 833.38138 O60502 O60502 628 634 MGEA5 Protein O-GlcNAcase yes yes 2 0.027749 106.42 By MS/MS 3 0 1 1 237000 237000 0 9220 260 9526 22808 18269 18269 1 4336.5 0 LSNCGYGR KSRGPRAFGRALPPRLSNCGYGRRTFVSKE GRALPPRLSNCGYGRRTFVSKESPHWQSKS R L S G R R 0 1 1 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 8 0 925.4076 Q5JSZ5 Q5JSZ5 1209 1216 PRRC2B Protein PRRC2B yes yes 2 0.0076078 113.41 By MS/MS 1.5 0.5 1 1 2 423550 423550 0 9221 1609 9527 22809;22810 18270 18270 1 136080 0 LSNIFVIGK VVHVKDANGNSFATRLSNIFVIGKGNKPWI NSFATRLSNIFVIGKGNKPWISLPRGKGIR R L S G K G 0 0 1 0 0 0 0 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 9 0 989.59097 P62701 P62701 222 230 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.00046661 149.72 By MS/MS By MS/MS 8.33 0.943 1 3 1 1 5 1 67616000 67427000 188330 9222 1165 9528 22811;22812;22813;22814;22815;22816 18271;18272;18273;18274;18275;18276;18277;18278;18279 18277 9 928590 254140 LSNKVEAIDVEEAKR LESLIRLAEAHAKVRLSNKVEAIDVEEAKR LSNKVEAIDVEEAKRLHREALKQSATDPRT R L S K R L 2 1 1 1 0 0 3 0 0 1 1 2 0 0 0 1 0 0 0 2 0 0 15 2 1699.9105 P33991 P33991 749 763 MCM4 DNA replication licensing factor MCM4 yes yes 3;4 0.00042118 163.8 By MS/MS 4.33 0.471 2 1 3 4823100 4823100 0 9223 806 9529 22817;22818;22819 18280;18281 18280 2 437170 0 LSNLALVKPEK NSILAQVLDQSARARLSNLALVKPEKTKAV ARARLSNLALVKPEKTKAVENYLIQMARYG R L S E K T 1 0 1 0 0 0 1 0 0 0 3 2 0 0 1 1 0 0 0 1 0 0 11 1 1210.7285 O14737 O14737 56 66 PDCD5 Programmed cell death protein 5 yes yes 2 0.0031037 129 By MS/MS 10 0 1 1 770840 770840 0 9224 136 9530 22820 18282 18282 1 41546 0 LSNNYYCTR RTQPPPKLPVGPSHKLSNNYYCTRDGRRES VGPSHKLSNNYYCTRDGRRESVPPSIIMSS K L S T R D 0 1 2 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 2 0 0 0 9 0 1189.5186 O95182 O95182 49 57 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 2 0.014886 91.867 By MS/MS 10 0 1 1 176940 176940 0 9225 392 9531 22821 18283 18283 1 9536.2 0 LSNSDSQDIQGR GPRPGCQPSSPCVPKLSNSDSQDIQGRNRD VPKLSNSDSQDIQGRNRDSQNGAIAPGHVS K L S G R N 0 1 1 2 0 2 0 1 0 1 1 0 0 0 0 3 0 0 0 0 0 0 12 0 1318.6113 O14545 O14545 486 497 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 1.6576E-08 208.17 By MS/MS 5 0 1 1 2454400 2454400 0 9226 125 9532 22822 18284 18284 1 24616 0 LSNTSPEFQEMSLLER FYFSTTYDLTHTLQRLSNTSPEFQEMSLLE SNTSPEFQEMSLLERADQRFVWNGHLLREL R L S E R A 0 1 1 0 0 1 3 0 0 0 3 0 1 1 1 3 1 0 0 0 0 0 16 0 1879.8986 Q9NTJ5 Q9NTJ5 146 161 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 6.0295E-11 233.52 By MS/MS 3 2.16 1 1 1 3 3405000 3405000 0 9227 2576 9533 22823;22824;22825 18285;18286;18287;18288 18288 4 73122 0 LSPADDELYQR CPPVELPWAPRRGHRLSPADDELYQRTRIS RGHRLSPADDELYQRTRISLLQREAAQAMY R L S Q R T 1 1 0 2 0 1 1 0 0 0 2 0 0 0 1 1 0 0 1 0 0 0 11 0 1305.6201 Q9BU61 Q9BU61 34 44 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 0.0059597 101.38 By MS/MS 10 0 1 1 1973800 1973800 0 9228 2321 9534 22826 18289 18289 1 106380 0 LSPAQGPPQPQSSAK FLSSLLPQSKKSPSRLSPAQGPPQPQSSAK LSPAQGPPQPQSSAKKESFGGQGTKGKDPT R L S A K K 2 0 0 0 0 3 0 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 15 0 1491.7682 A4D1P6 A4D1P6 276 290 WDR91 WD repeat-containing protein 91 yes yes 2 0.00046436 145.81 By MS/MS 4.5 0.5 1 1 2 772020 772020 0 9229 16 9535 22827;22828 18290;18291 18290 2 45804 0 LSPEELLLR AALLRDGETLEELMKLSPEELLLRWANFHL LEELMKLSPEELLLRWANFHLENSGWQKIN K L S L R W 0 1 0 0 0 0 2 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0 9 0 1068.6179 P13797;P13796;Q14651 P13797 267 275 PLS3;LCP1;PLS1 Plastin-3;Plastin-2;Plastin-1 yes no 2 0.023868 78.149 By MS/MS 5 0 1 1 311990 311990 0 9230 605 9536 22829 18292 18292 1 3129.1 0 LSPELLNTGR ILVKMAKEELLFGGKLSPELLNTGRFETKD LFGGKLSPELLNTGRFETKDISDIEGEKDG K L S G R F 0 1 1 0 0 0 1 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 10 0 1098.6033 P52789 P52789 324 333 HK2 Hexokinase-2 yes yes 2 0.015123 89.171 By MS/MS 4.5 0.5 1 1 2 2591000 2591000 0 9231 1023 9537 22830;22831 18293 18293 1 210860 0 LSPELLNTGRFETK ILVKMAKEELLFGGKLSPELLNTGRFETKD KLSPELLNTGRFETKDISDIEGEKDGIRKA K L S T K D 0 1 1 0 0 0 2 1 0 0 3 1 0 1 1 1 2 0 0 0 0 0 14 1 1603.857 P52789 P52789 324 337 HK2 Hexokinase-2 yes yes 2 0.014162 103.43 By MS/MS 4 0 1 1 706890 706890 0 9232 1023 9538 22832 18294 18294 1 66523 0 LSPEPWTPETGLVTDAFK ISASLEKFEIPVKIRLSPEPWTPETGLVTD EPWTPETGLVTDAFKLKRKELKTHYQADIE R L S F K L 1 0 0 1 0 0 2 1 0 0 2 1 0 1 3 1 3 1 0 1 0 0 18 0 1986.9939 O95573;O60488 O95573 682 699 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 2 0.00019111 175.21 By MS/MS 5 0 1 1 386960 386960 0 9233 417;257 9539 22833 18295 18295 1 3881 0 LSPFMADIR GEYAVHVLCNSEDIRLSPFMADIRDAPQDF NSEDIRLSPFMADIRDAPQDFHPDRVKARG R L S I R D 1 1 0 1 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 9 0 1048.5376 P21333 P21333 656 664 FLNA Filamin-A yes yes 2 0.051695 74.464 By MS/MS 1.67 0.471 1 2 3 790570 790570 0 9234 677 9540;9541 22834;22835;22836 18296;18297 18296 339 2 254440 0 LSPPSSSAASSYSFSDLNSTR LYEKKIFEYETQRRRLSPPSSSAASSYSFS SAASSYSFSDLNSTRGDADMYDLPKKEDAL R L S T R G 2 1 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 21 0 2159.9971 P50402 P50402 48 68 EMD Emerin yes yes 2 8.2172E-13 236.31 By MS/MS 8 0 1 1 3250200 3250200 0 9235 973 9542 22837 18298 18298 1 41033 0 LSPPYSSPQEFAQDVGR GTLDLTLIRARLQEKLSPPYSSPQEFAQDV PPYSSPQEFAQDVGRMFKQFNKLTEDKADV K L S G R M 1 1 0 1 0 2 1 1 0 0 1 0 0 1 3 3 0 0 1 1 0 0 17 0 1876.8955 Q13263 Q13263 751 767 TRIM28 Transcription intermediary factor 1-beta yes yes 2 4.6981E-06 203.85 By MS/MS 6.2 1.72 1 1 1 1 1 5 16449000 16449000 0 9236 1367 9543 22838;22839;22840;22841;22842 18299;18300;18301;18302;18303;18304;18305 18300 7 1228300 0 LSQDEIVLGTK ______________________________ REEKLSQDEIVLGTKAVIQGLETLRGEHRA K L S T K A 0 0 0 1 0 1 1 1 0 1 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1201.6554 Q9H0B6 Q9H0B6 12 22 KLC2 Kinesin light chain 2 yes yes 2 0.0023447 110.93 By MS/MS 4.5 0.5 1 1 2 2459300 2459300 0 9237 2405 9544 22843;22844 18306 18306 1 57197 0 LSQEEILGSTR SGLVLGQRDEPAGHRLSQEEILGSTRLVSQ AGHRLSQEEILGSTRLVSQGLEALRSEHQA R L S T R L 0 1 0 0 0 1 2 1 0 1 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1231.6408 Q9NSK0 Q9NSK0 17 27 KLC4 Kinesin light chain 4 yes yes 2 0.00097037 122.18 By MS/MS 5 0 1 1 866490 866490 0 9238 2572 9545 22845 18307 18307 1 8690.4 0 LSQLEGVNVER ERQELRILVGTNLVRLSQLEGVNVERYKQI NLVRLSQLEGVNVERYKQIVLTGILEQVVN R L S E R Y 0 1 1 0 0 1 2 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1242.6568 Q96QK1 Q96QK1 227 237 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00047628 132.03 By MS/MS 5.5 0.5 1 1 2 13417000 13417000 0 9239 2217 9546 22846;22847 18308 18308 1 126990 0 LSQLENLQK RLCKCHYIEDDCLLRLSQLENLQKTILEME DDCLLRLSQLENLQKTILEMEIISCGNITD R L S Q K T 0 0 1 0 0 2 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1071.5924 Q99766 Q99766 145 153 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.0077345 104.42 By MS/MS 9 0 1 1 958090 958090 0 9240 2266 9547 22848 18309 18309 1 18855 0 LSQMAVQGLQQFK EFRAPTLASLENCMKLSQMAVQGLQQFKSP MKLSQMAVQGLQQFKSPLLQLPHIEEDNLR K L S F K S 1 0 0 0 0 4 0 1 0 0 2 1 1 1 0 1 0 0 0 1 0 0 13 0 1476.7759 Q9UGP8 Q9UGP8 369 381 SEC63 Translocation protein SEC63 homolog yes yes 2 1.0326E-07 212.28 By MS/MS 4 0 1 1 1205600 1205600 0 9241 2724 9548 22849 18310 18310 1155 1 113450 0 LSQNNFALGYK WLAGYQMSFDTAKSKLSQNNFALGYKAADF AKSKLSQNNFALGYKAADFQLHTHVNDGTE K L S Y K A 1 0 2 0 0 1 0 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1253.6404 Q9Y277 Q9Y277 164 174 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 1.6268E-09 218.94 By MS/MS By matching 8 0 2 1 1 3475600 3448100 27534 9242 2818 9549 22850;22851 18311 18311 1 43532 37155 LSQSDEDVIR LATPELGSSLKKKKRLSQSDEDVIRLIGQH KKKKRLSQSDEDVIRLIGQHLNGLGLNQTV R L S I R L 0 1 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1160.5673 Q9H7D7 Q9H7D7 120 129 WDR26 WD repeat-containing protein 26 yes yes 2 0.00027682 141.91 By MS/MS 5 0 1 1 1093800 1093800 0 9243 2461 9550 22852 18312;18313 18313 2 10970 0 LSQSLGLVSK FPSSLTSTERAFIHRLSQSLGLVSKSKGKG AFIHRLSQSLGLVSKSKGKGANRYLTVKKK R L S S K S 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 3 0 0 0 1 0 0 10 0 1030.6023 Q9H6S0 Q9H6S0 81 90 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.0094885 95.483 By MS/MS 3 0 1 1 695460 695460 0 9244 2458 9551 22853 18314 18314 1 12725 0 LSQSPDSNLCDK QDKLRDMGIVDILHKLSQSPDSNLCDKAKM LHKLSQSPDSNLCDKAKMALQQYLA_____ K L S D K A 0 0 1 2 1 1 0 0 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1362.6085 Q8IUR7 Q8IUR7 652 663 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.0092606 91.123 By MS/MS 5 0 1 1 667100 667100 0 9245 1860 9552 22854 18315 18315 1 6690.7 0 LSQTLSLVPR TPTYARLVQKAELVRLSQTLSLVPRLHWLL AELVRLSQTLSLVPRLHWLLVEDAEGPTPL R L S P R L 0 1 0 0 0 1 0 0 0 0 3 0 0 0 1 2 1 0 0 1 0 0 10 0 1112.6554 O94766 O94766 96 105 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 2.65E-05 163.66 By MS/MS 7 0 1 1 999080 999080 0 9246 364 9553 22855 18316 18316 1 15684 0 LSQVSDSVSGQTVVDPK MRKIGQARNTLMDMRLSQVSDSVSGQTVVD QVSDSVSGQTVVDPKGYLTDLNSMIPTHGG R L S P K G 0 0 0 2 0 2 0 1 0 0 1 1 0 0 1 4 1 0 0 4 0 0 17 0 1744.8843 O94906 O94906 255 271 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 8.3012E-45 333.59 By MS/MS 4.5 0.5 1 1 2 4486000 4486000 0 9247 376 9554 22856;22857 18317 18317 1 395070 0 LSSDVCPTSDK VSAGEYTYYFRVCGKLSSDVCPTSDKSKVV VCGKLSSDVCPTSDKSKVVSSCQEKREPQG K L S D K S 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 3 1 0 0 1 0 0 11 0 1207.5391 P11717 P11717 1265 1275 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.01009 102.06 By MS/MS 1.5 0.5 1 1 2 487290 487290 0 9248 583 9555 22858;22859 18318 18318 0 153290 0 LSSDVLTLLIK PQARALCGLDESKAKLSSDVLTLLIKQYCR SKAKLSSDVLTLLIKQYCRESGVRNLQKQV K L S I K Q 0 0 0 1 0 0 0 0 0 1 4 1 0 0 0 2 1 0 0 1 0 0 11 0 1200.7329 P36776 P36776 691 701 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.00089159 123.75 By MS/MS 4 0 1 1 230150 230150 0 9249 839 9556 22860 18319 18319 1 21659 0 LSSLFVK MRHHIETGGGQLPAKLSSLFVKCLQNPSSD GGGQLPAKLSSLFVKCLQNPSSDIRLVAEK K L S V K C 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 1 0 0 7 0 792.47454 Q92616 Q92616 2551 2557 GCN1L1 Translational activator GCN1 yes yes 2 0.014396 123.99 By MS/MS 3.5 1.12 1 1 1 1 4 2104300 2104300 0 9250 2064 9557 22861;22862;22863;22864 18320;18321 18320 2 485740 0 LSSLIIGPSK GAAGNLKTEDLFENRLSSLIIGPSKERTLS LFENRLSSLIIGPSKERTLSADASVNTLPV R L S S K E 0 0 0 0 0 0 0 1 0 2 2 1 0 0 1 3 0 0 0 0 0 0 10 0 1013.6121 Q92615 Q92615 554 563 LARP4B La-related protein 4B yes yes 2 0.0014766 114.4 By MS/MS 4 0 1 1 964620 964620 0 9251 2063 9558 22865 18322 18322 1 90777 0 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 6.2374E-08 196.52 By MS/MS By MS/MS 6.18 3.02 11 8 8 9 9 7 12 12 18 17 40 71 2697300000 1712400000 984890000 + 9252 37 9559 22866;22867;22868;22869;22870;22871;22872;22873;22874;22875;22876;22877;22878;22879;22880;22881;22882;22883;22884;22885;22886;22887;22888;22889;22890;22891;22892;22893;22894;22895;22896;22897;22898;22899;22900;22901;22902;22903;22904;22905;22906;22907;22908;22909;22910;22911;22912;22913;22914;22915;22916;22917;22918;22919;22920;22921;22922;22923;22924;22925;22926;22927;22928;22929;22930;22931;22932;22933;22934;22935;22936;22937;22938;22939;22940;22941;22942;22943;22944;22945;22946;22947;22948;22949;22950;22951;22952;22953;22954;22955;22956;22957;22958;22959;22960;22961;22962;22963;22964;22965;22966;22967;22968;22969;22970;22971;22972;22973;22974;22975;22976 18323;18324;18325;18326;18327;18328;18329;18330;18331;18332;18333;18334;18335;18336;18337;18338;18339;18340;18341;18342;18343;18344;18345;18346;18347;18348;18349;18350;18351;18352;18353;18354;18355;18356;18357;18358;18359;18360;18361;18362;18363;18364;18365;18366;18367;18368;18369;18370;18371;18372;18373;18374;18375;18376;18377;18378;18379;18380;18381;18382;18383;18384;18385;18386;18387;18388;18389;18390;18391;18392;18393;18394;18395;18396;18397;18398;18399;18400;18401;18402;18403;18404;18405;18406;18407;18408;18409;18410;18411;18412;18413;18414;18415;18416;18417;18418;18419;18420;18421;18422;18423;18424;18425;18426;18427;18428;18429;18430;18431;18432;18433;18434;18435;18436;18437;18438;18439;18440;18441;18442;18443;18444;18445;18446;18447;18448;18449;18450;18451;18452;18453;18454;18455;18456;18457;18458;18459;18460;18461;18462 18447 140 98764000 1314100000 LSSSQGTIETSLQDIDSR AELGEISDIHTKLLRLSSSQGTIETSLQDI SQGTIETSLQDIDSRLSPGGSLADAWAHQE R L S S R L 0 1 0 2 0 2 1 1 0 2 2 0 0 0 0 5 2 0 0 0 0 0 18 0 1935.9385 Q9UHD2 Q9UHD2 508 525 TBK1 Serine/threonine-protein kinase TBK1 yes yes 2 3.2228E-11 252.46 By MS/MS 4.5 0.5 1 1 2 1801000 1801000 0 9253 2729 9560 22977;22978 18463;18464;18465 18463 3 98448 0 LSSSSATLLNSPDR TMNLSKYVDPVISKRLSSSSATLLNSPDRA RLSSSSATLLNSPDRARRLQLSPWESSVVN R L S D R A 1 1 1 1 0 0 0 0 0 0 3 0 0 0 1 5 1 0 0 0 0 0 14 0 1446.7314 Q14244 Q14244 199 212 MAP7 Ensconsin yes yes 2 0.00048867 173.04 By MS/MS 4 0 1 1 2039100 2039100 0 9254 1434 9561 22979 18466 18466 1 191890 0 LSSTQEGVR LQNIISKFLPPVLLKLSSTQEGVRKKVMEL PPVLLKLSSTQEGVRKKVMELLVHLNKRIK K L S V R K 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 9 0 975.49852 Q5VYK3 Q5VYK3 47 55 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00071905 139.98 By MS/MS 2 0 1 1 1122800 1122800 0 9255 1656 9562 22980 18467 18467 1 379770 0 LSTMETGTGLIR APGAQILSIKIGDTRLSTMETGTGLIRAMI DTRLSTMETGTGLIRAMIEVINHKCDLVNY R L S I R A 0 1 0 0 0 0 1 2 0 1 2 0 1 0 0 1 3 0 0 0 0 0 12 0 1277.6649 P29144 P29144 301 312 TPP2 Tripeptidyl-peptidase 2 yes yes 2 0.035795 76.221 By MS/MS 10 0 1 1 1105000 1105000 0 9256 757 9563 22981 18468 18468 379 1 59556 0 LSTPAGVQVILR PSNIKRKNKHGWVRRLSTPAGVQVILRRML VRRLSTPAGVQVILRRMLKGRKSLSH____ R L S L R R 1 1 0 0 0 1 0 1 0 1 2 0 0 0 1 1 1 0 0 2 0 0 12 0 1252.7503 Q9BQ48 Q9BQ48 70 81 MRPL34 39S ribosomal protein L34, mitochondrial yes yes 2 0.0085851 93.096 By MS/MS 10 0 1 1 363130 363130 0 9257 2282 9564 22982 18469 18469 1 19571 0 LSTQSNSNNIEPAR KSSFLASLNPKTWGRLSTQSNSNNIEPART RLSTQSNSNNIEPARTAGGSGLARAASKDT R L S A R T 1 1 3 0 0 1 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 14 0 1529.7434 Q14669 Q14669 1053 1066 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.00158 114.76 By MS/MS 2.5 0.5 1 1 2 391480 391480 0 9258 1447 9565 22983;22984 18470 18470 1 100200 0 LSTVDMTGIPTLDNLQK NSSQEWKRLGVEQLRLSTVDMTGIPTLDNL TVDMTGIPTLDNLQKGVQFALKYQSLGQCV R L S Q K G 0 0 1 2 0 1 0 1 0 1 3 1 1 0 1 1 3 0 0 1 0 0 17 0 1844.9554 Q8WUK0 Q8WUK0 97 113 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.00012104 184.96 By MS/MS 9 0 2 2 701290 701290 0 9259 2016 9566;9567 22985;22986 18471;18472;18473 18472 977 3 13801 0 LSVADSQAEAK PTITEGVAAALLLLKLSVADSQAEAKLSSF LLLKLSVADSQAEAKLSSFWQLIVDEKKQV K L S A K L 3 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1117.5615 Q92616 Q92616 499 509 GCN1L1 Translational activator GCN1 yes yes 2 0.029387 80.737 By MS/MS 3 0.816 1 1 1 3 4767900 4767900 0 9260 2064 9568 22987;22988;22989 18474 18474 1 1188900 0 LSVAGNCR EKVGMQIPRFCYHERLSVAGNCRMCLVEIE RFCYHERLSVAGNCRMCLVEIEKAPKVVAA R L S C R M 1 1 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 875.42834 P28331 P28331 69 76 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.034879 99.375 By MS/MS 5 0 1 1 0 0 0 9261 753 9569 22990 18475 18475 1 0 0 LSVDYGKK GGGTGSGFTSLLMERLSVDYGKKSKLEFSI TSLLMERLSVDYGKKSKLEFSIYPAPQVST R L S K K S 0 0 0 1 0 0 0 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 8 1 908.49673 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q9BQE3 Q9BQE3 157 164 TUBA1B;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 0.026028 113.41 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 225460000 225460000 0 9262 1210;1751;2290;1211 9570 22991;22992;22993;22994;22995;22996;22997;22998;22999;23000 18476;18477 18477 2 2009800 0 LSVKEHTEEDFKGR IFLEIIQSSLPEGVRLSVKEHTEEDFKGRF RLSVKEHTEEDFKGRFKARPELEELLAKLK R L S G R F 0 1 0 1 0 0 3 1 1 0 1 2 0 1 0 1 1 0 0 1 0 0 14 2 1673.8373 Q96GC5 Q96GC5 184 197 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 3 0.00028927 166.62 By MS/MS 9 0 1 1 1113000 1113000 0 9263 2158 9571 23001 18478 18478 1 21903 0 LSVTVDPK ELQAEQEDRALRSFKLSVTVDPKYHPKIIG RALRSFKLSVTVDPKYHPKIIGRKGAVITQ K L S P K Y 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 2 0 0 8 0 857.48583 Q00341 Q00341 1055 1062 HDLBP Vigilin yes yes 2 0.0035779 132.08 By MS/MS 3.5 0.5 1 1 2 1336700 1336700 0 9264 1260 9572 23002;23003 18479 18479 1 47385 0 LSYFNELETINTK EQSELVDLAENIQQKLSYFNELETINTKLN QKLSYFNELETINTKLNSPTLSVNSDGFIP K L S T K L 0 0 2 0 0 0 2 0 0 1 2 1 0 1 0 1 2 0 1 0 0 0 13 0 1570.7879 Q96JB2 Q96JB2 197 209 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 1.5072E-24 286.19 By MS/MS 4 0 1 1 1136900 1136900 0 9265 2176 9573 23004 18480 18480 1 106990 0 LSYNTASNK ______________________________ LTYRRRLSYNTASNKTRLSRTPGNRIVYLY R L S N K T 1 0 2 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 9 0 996.48762 P49207 P49207 11 19 RPL34 60S ribosomal protein L34 yes yes 2 1.9788E-05 177.3 By MS/MS By MS/MS 9.67 0.471 1 2 1 2 10380000 10099000 281150 9266 945 9574 23005;23006;23007 18481;18482 18482 2 544280 497380 LTADELWK HLMSQQYRPYSFFTKLTADELWKGALAETG PYSFFTKLTADELWKGALAETGAGAKKGRG K L T W K G 1 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 8 0 974.5073 P82675 P82675 93 100 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.010564 110.12 By MS/MS 7 0 1 1 1458400 1458400 0 9267 1233 9575 23008 18483 18483 1 22894 0 LTAPEDVFSK EPDTLEAAKKTMWERLTAPEDVFSKLQREN TMWERLTAPEDVFSKLQRENIAIIESYGAA R L T S K L 1 0 0 1 0 0 1 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 10 0 1105.5655 Q92621 Q92621 1452 1461 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.02414 84.817 By MS/MS 2.5 0.5 1 1 2 659910 659910 0 9268 2065 9576 23009;23010 18484 18484 1 177650 0 LTAYAMTIPFVR DKKISPKRDKGLVEKLTAYAMTIPFVRQQV VEKLTAYAMTIPFVRQQVYKKVEEKVRKQT K L T V R Q 2 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 2 0 1 1 0 0 12 0 1381.7428 P40939 P40939 268 279 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 4.928E-05 167.67 By MS/MS 5 0 2 2 1466600 1466600 0 9269 865 9577;9578 23011;23012 18485;18486 18486 449 2 14709 0 LTAYEFAK GEIVLITGAGHGIGRLTAYEFAKLKSKLVL AGHGIGRLTAYEFAKLKSKLVLWDINKHGL R L T A K L 2 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 941.48583 Q8NBQ5 Q8NBQ5 51 58 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 0.029286 90.37 By MS/MS 7.5 0.5 1 1 2 2876400 2876400 0 9270 1943 9579 23013;23014 18487 18487 1 37506 0 LTCLFQIK KHSSLFVKQLDGSERLTCLFQIKRLMSLCC QLDGSERLTCLFQIKRLMSLCCRLLQNCND R L T I K R 0 0 0 0 1 1 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 8 0 1021.563 Q15386 Q15386 138 145 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.012568 107.9 By MS/MS 4 0 1 1 266440 266440 0 9271 1505 9580 23015 18488 18488 1 25074 0 LTDAFLLLR ______________________________ ______________________________ R L T L R N 1 1 0 1 0 0 0 0 0 0 4 0 0 1 0 0 1 0 0 0 0 0 9 0 1060.6281 O14662 O14662 6 14 STX16 Syntaxin-16 yes yes 2 9.0295E-05 163.99 By MS/MS 7 0 1 1 182310 182310 0 9272 131 9581 23016 18489 18489 1 2862 0 LTDAQILTR IEPIQSRCAVLRYTKLTDAQILTRLMNVIE VLRYTKLTDAQILTRLMNVIEKERVPYTDD K L T T R L 1 1 0 1 0 1 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1029.5819 P35250 P35250 193 201 RFC2 Replication factor C subunit 2 yes yes 2 0.0062026 120.45 By MS/MS 7.5 0.5 1 1 2 4430300 4430300 0 9273 817 9582 23017;23018 18490 18490 1 67626 0 LTDEEVEMTR DTVVALLADVVLQPRLTDEEVEMTRMAVQF VLQPRLTDEEVEMTRMAVQFELEDLNLRPD R L T T R M 0 1 0 1 0 0 3 0 0 0 1 0 1 0 0 0 2 0 0 1 0 0 10 0 1221.5547 Q10713 Q10713 176 185 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 0.00064861 130.41 By MS/MS 6 0 1 1 1763900 1763900 0 9274 1323 9583 23019 18491 18491 1 12126 0 LTDPIPTTETSIAPR KASEAAAKKTQPKARLTDPIPTTETSIAPR LTDPIPTTETSIAPRQRPKAGQTQPNPGIL R L T P R Q 1 1 0 1 0 0 1 0 0 2 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1610.8516 Q2M2I8 Q2M2I8 353 367 AAK1 AP2-associated protein kinase 1 yes yes 2 0.000362 137.4 By MS/MS 3.5 0.5 1 1 2 375860 375860 0 9275 1567 9584 23020;23021 18492 18492 1 22953 0 LTDYCKK FFLQHCVTMNTPVEKLTDYCKKLKEVQMHS TMNTPVEKLTDYCKKLKEVQMHSFPLQFTL K L T K K L 0 0 0 1 1 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 0 7 1 926.45315 P42704 P42704 390 396 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.042839 128.86 By MS/MS 4 0.816 1 1 1 3 5362900 5362900 0 9276 886 9585 23022;23023;23024 18493 18493 1 134530 0 LTDYVAFLEN PAPVPPIPNEQQLARLTDYVAFLEN_____ QQLARLTDYVAFLEN_______________ R L T E N - 1 0 1 1 0 0 1 0 0 0 2 0 0 1 0 0 1 0 1 1 0 0 10 0 1183.5761 Q99627 Q99627 200 209 COPS8 COP9 signalosome complex subunit 8 yes yes 2 0.044801 76.064 By MS/MS 9 0 1 1 129000 129000 0 9277 2255 9586 23025 18494 18494 1 2538.8 0 LTEAKPVDKVK EDIPIAKERTHFTVRLTEAKPVDKVKLIKE FTVRLTEAKPVDKVKLIKEIKNYIQGINLV R L T V K L 1 0 0 1 0 0 1 0 0 0 1 3 0 0 1 0 1 0 0 2 0 0 11 2 1226.7234 P52815 P52815 134 144 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2;4 1.3763E-08 198.72 By MS/MS 9 0 2 2 3521700 3521700 0 9278 1024 9587 23026;23027 18495;18496 18495 2 69307 0 LTEDKADVQSIIGLQR EFAQDVGRMFKQFNKLTEDKADVQSIIGLQ TEDKADVQSIIGLQRFFETRMNEAFGDTKF K L T Q R F 1 1 0 2 0 2 1 1 0 2 2 1 0 0 0 1 1 0 0 1 0 0 16 1 1784.9632 Q13263 Q13263 775 790 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 2.7366E-32 321.86 By MS/MS 4.8 0.748 2 2 1 5 16095000 16095000 0 9279 1367 9588 23028;23029;23030;23031;23032 18497;18498;18499 18498 3 1313300 0 LTEDKETLQYLQQNAK KNTRNLDPLVYLLSKLTEDKETLQYLQQNA TEDKETLQYLQQNAKERAELAAAAVGSSTT K L T A K E 1 0 1 1 0 3 2 0 0 0 3 2 0 0 0 0 2 0 1 0 0 0 16 1 1920.9793 Q9BSJ2 Q9BSJ2 88 103 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2;3 3.8399E-16 288.61 By MS/MS 4 0 2 2 4399000 4399000 0 9280 2307 9589 23033;23034 18500;18501 18501 2 413980 0 LTEDLEYHELLDR PMPVNFNEPLSMLQRLTEDLEYHELLDRAA QRLTEDLEYHELLDRAAKCENSLEQLCYVA R L T D R A 0 1 0 2 0 0 3 0 1 0 4 0 0 0 0 0 1 0 1 0 0 0 13 0 1644.7995 P22059 P22059 450 462 OSBP Oxysterol-binding protein 1 yes yes 3 0.035574 72.731 By MS/MS 4.5 0.5 1 1 2 1458600 1458600 0 9281 686 9590 23035;23036 18502 18502 1 108570 0 LTEGCSFR GCSTVLCQPTGGKARLTEGCSFRRKQH___ PTGGKARLTEGCSFRRKQH___________ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;Q71UM5 P42677 73 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 2 0.0039801 130.22 By MS/MS 5.2 3.97 1 1 1 2 5 18488000 18488000 0 9282 882;1752 9591 23037;23038;23039;23040;23041 18503;18504;18505 18504 3 1079200 0 LTEGMSGR LAQFDYGRKCSEVARLTEGMSGREIAQLAV KCSEVARLTEGMSGREIAQLAVSWQATAYA R L T G R E 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 1 1 0 0 0 0 0 8 0 849.40145 Q9NVI7;Q5T9A4 Q5T9A4 521 528 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 0.0039801 130.22 By MS/MS 5 0 2 2 3207700 3207700 0 9283 2598;1638 9592;9593 23042;23043 18506;18507 18507 895 2 32171 0 LTELETAVR DKFSQAAKVAELEKRLTELETAVRCDQDAQ AELEKRLTELETAVRCDQDAQNPLSAGLQG R L T V R C 1 1 0 0 0 0 2 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 9 0 1030.5659 Q13561 Q13561 231 239 DCTN2 Dynactin subunit 2 yes yes 2 4.6367E-20 252.49 By MS/MS By MS/MS 6 0 2 1 1 11043000 10895000 147650 9284 1397 9594 23044;23045 18508;18509 18508 2 74898 151300 LTELGTVDPK TLQEKKEKIQTGLKKLTELGTVDPKNKYQE TGLKKLTELGTVDPKNKYQELINDIARDIR K L T P K N 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 2 0 0 1 0 0 10 0 1071.5812 P46940 P46940 1466 1475 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.0019507 126.24 By MS/MS 2 0 1 1 0 0 0 9285 922 9595 23046 18510 18510 1 0 0 LTELLENDPSVR EALLGRSIQPEQVQRLTELLENDPSVRAIH VQRLTELLENDPSVRAIHDVKATDLGLGKV R L T V R A 0 1 1 1 0 0 2 0 0 0 3 0 0 0 1 1 1 0 0 1 0 0 12 0 1384.7198 Q6PML9 Q6PML9 462 473 SLC30A9 Zinc transporter 9 yes yes 2 4.3204E-05 169.58 By MS/MS 1 0 2 2 238990 238990 0 9286 1723 9596 23047;23048 18511;18512 18511 2 57588 0 LTEQKGEQQIQK QKELAAQLNEEAKRRLTEQKGEQQIQKARK KRRLTEQKGEQQIQKARKSNVSYKNPSLMP R L T Q K A 0 0 0 0 0 4 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 12 1 1428.7573 Q9Y5B9 Q9Y5B9 493 504 SUPT16H FACT complex subunit SPT16 yes yes 2;3 1.6145E-05 183.85 By MS/MS 1.8 0.748 2 2 1 5 1112800 1112800 0 9287 2909 9597 23049;23050;23051;23052;23053 18513;18514 18513 2 234190 0 LTEQLAGPLR LSCFVFQENSSEMPKLTEQLAGPLRQMQEC SEMPKLTEQLAGPLRQMQECAKRIAKVSAE K L T L R Q 1 1 0 0 0 1 1 1 0 0 3 0 0 0 1 0 1 0 0 0 0 0 10 0 1096.6241 P42285 P42285 924 933 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.0020335 125.71 By MS/MS 4 0 1 1 0 0 0 9288 878 9598 23054 18515 18515 1 0 0 LTETVVTEYLNSGNANEAVNGVR KTSKKPPPSKEELLKLTETVVTEYLNSGNA YLNSGNANEAVNGVREMRAPKHFLPEMLSK K L T V R E 2 1 4 0 0 0 3 2 0 0 2 0 0 0 0 1 3 0 1 4 0 0 23 0 2449.2085 P78344 P78344 547 569 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 4.408E-07 127.07 By MS/MS 4 0 1 1 402820 402820 0 9289 1219 9599 23055 18516 18516 1 37908 0 LTEVLTDSHVK APKQLSSCLPNIVPKLTEVLTDSHVKVQKA IVPKLTEVLTDSHVKVQKAGQQALRQIGSV K L T V K V 0 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 2 0 0 2 0 0 11 0 1240.6663 Q92616 Q92616 1543 1553 GCN1L1 Translational activator GCN1 yes yes 2;3 1.5369E-18 261.6 By MS/MS 2.2 0.748 1 2 2 5 5606800 5606800 0 9290 2064 9600 23056;23057;23058;23059;23060 18517;18518;18519;18520 18517 4 1540100 0 LTFDTTFSPNTGK GTEIAIEDQICQGLKLTFDTTFSPNTGKKS LKLTFDTTFSPNTGKKSGKIKSSYKRECIN K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 P45880 P45880 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 1.1382E-07 211.37 By MS/MS 8 0 1 1 4243100 4243100 0 9291 903 9601 23061 18521 18521 1 53569 0 LTFDTTFSPNTGKK GTEIAIEDQICQGLKLTFDTTFSPNTGKKS KLTFDTTFSPNTGKKSGKIKSSYKRECINL K L T K K S 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 1 4 0 0 0 0 0 14 1 1555.7882 P45880 P45880 108 121 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 1.436E-23 284.73 By MS/MS 8 0 1 1 3065200 3065200 0 9292 903 9602 23062 18522 18522 1 38697 0 LTFISGR LSSSLKRFDDKYTLKLTFISGRTKQQREAE FDDKYTLKLTFISGRTKQQREAEFTKSIAK K L T G R T 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 0 7 0 792.44939 Q15005 Q15005 174 180 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.048731 90.777 By MS/MS 9 0 1 1 1584900 1584900 0 9293 1469 9603 23063 18523 18523 1 31191 0 LTFLDLR NKLSFISLELCVLQKLTFLDLRNNFLNSLP LELCVLQKLTFLDLRNNFLNSLPEEMESLV K L T L R N 0 1 0 1 0 0 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 7 0 876.5069 Q9H9A6 Q9H9A6 474 480 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.026183 107.59 By MS/MS 5 0 1 1 676900 676900 0 9294 2484 9604 23064 18524 18524 1 6788.9 0 LTFSCLGGSDNFK VEDSKDVNVNFEKSKLTFSCLGGSDNFKHL SKLTFSCLGGSDNFKHLNEIDLFHCIDPND K L T F K H 0 0 1 1 1 0 0 2 0 0 2 1 0 2 0 2 1 0 0 0 0 0 13 0 1444.6657 Q15185 Q15185 36 48 PTGES3 Prostaglandin E synthase 3 yes yes 2 1.3012E-12 247.22 By MS/MS 9 0 1 1 702200 702200 0 9295 1495 9605 23065 18525 18525 1 13819 0 LTGADGTPPGFLLK YTTTRLGIYTVLFERLTGADGTPPGFLLKA RLTGADGTPPGFLLKAVIGMTAGATGAFVG R L T L K A 1 0 0 1 0 0 0 3 0 0 3 1 0 1 2 0 2 0 0 0 0 0 14 0 1385.7555 Q02978 Q02978 109 122 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 3.8E-07 238.01 By MS/MS 6.43 3.25 1 1 1 2 1 1 7 49690000 49690000 0 9296 1284 9606 23066;23067;23068;23069;23070;23071;23072 18526;18527;18528;18529;18530;18531;18532;18533 18529 8 757780 0 LTGDVEELEIQEKPALK PYTGPFNLLCYQLQKLTGDVEELEIQEKPA GDVEELEIQEKPALKVFKNITVIQEPGMVV K L T L K V 1 0 0 1 0 1 4 1 0 1 3 2 0 0 1 0 1 0 0 1 0 0 17 1 1911.0201 Q9UKF6 Q9UKF6 533 549 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 3 0.0021736 105.19 By MS/MS 5 0 1 1 2791500 2791500 0 9297 2759 9607 23073 18534 18534 1 27997 0 LTGGKEITEK GDLRKAITFLQSATRLTGGKEITEKVITDI QSATRLTGGKEITEKVITDIAGVIPAEKID R L T E K V 0 0 0 0 0 0 2 2 0 1 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1074.5921 P35249 P35249 251 260 RFC4 Replication factor C subunit 4 yes yes 2 0.014847 103.26 By MS/MS 7 0 1 1 1224900 1224900 0 9298 816 9608 23074 18535 18535 1 19228 0 LTGKDVNFEFPEFQL NVEHKVETFSGVYKKLTGKDVNFEFPEFQL LTGKDVNFEFPEFQL_______________ K L T Q L - 0 0 1 1 0 1 2 1 0 0 2 1 0 3 1 0 1 0 0 1 0 0 15 1 1782.8829 P62081 P62081 180 194 RPS7 40S ribosomal protein S7 yes yes 2 0.00096913 176.87 By MS/MS 9 0 1 1 451540 451540 0 9299 1138 9609 23075 18536 18536 1 8886.4 0 LTGLSEISLR FEEEDGKEYIYKEPKLTGLSEISLRLVKLY YKEPKLTGLSEISLRLVKLYGEKFGTENVK K L T L R L 0 1 0 0 0 0 1 1 0 1 3 0 0 0 0 2 1 0 0 0 0 0 10 0 1087.6237 Q5JSL3 Q5JSL3 1789 1798 DOCK11 Dedicator of cytokinesis protein 11 yes yes 2 1.8131E-07 183.43 By MS/MS 2 0 1 1 332960 332960 0 9300 1608 9610 23076 18537 18537 1 112620 0 LTGVFAPR HLKRVAAPKHWMLDKLTGVFAPRPSTGPHK KHWMLDKLTGVFAPRPSTGPHKLRECLPLI K L T P R P 1 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 8 0 859.49159 P62701;Q8TD47;P22090 P62701 23 30 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.009037 111.82 By MS/MS 9 0.816 1 1 1 3 10995000 10995000 0 9301 1165 9611 23077;23078;23079 18538;18539 18539 2 146800 0 LTHDDTGAR NQVTSVPELFLTAVKLTHDDTGARYLHLAR FLTAVKLTHDDTGARYLHLAREDTNNLFSV K L T A R Y 1 1 0 2 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 0 0 0 9 0 984.46247 Q5JRX3 Q5JRX3 67 75 PITRM1 Presequence protease, mitochondrial yes yes 2 0.030245 84.498 By MS/MS 4 0 1 1 205680 205680 0 9302 1607 9612 23080 18540 18540 1 19356 0 LTHVDSPLEAPAGPLGQVK GPPHITSSAPELRQRLTHVDSPLEAPAGPL DSPLEAPAGPLGQVKLTLWYYSEERKLVSI R L T V K L 2 0 0 1 0 1 1 2 1 0 3 1 0 0 3 1 1 0 0 2 0 0 19 0 1928.0367 Q9BSJ8 Q9BSJ8 958 976 ESYT1 Extended synaptotagmin-1 yes yes 3 0.0090789 83.54 By MS/MS 4 0.816 1 1 1 3 2051100 2051100 0 9303 2308 9613 23081;23082;23083 18541 18541 1 84328 0 LTHVLTGK GCPRGSPVRCGQAVRLTHVLTGKNLHTHHF RCGQAVRLTHVLTGKNLHTHHFPSPLSNNQ R L T G K N 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 2 0 0 1 0 0 8 0 867.5178 Q9HCN8 Q9HCN8 106 113 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.019664 100.02 By MS/MS 9 0 1 1 2623300 2623300 0 9304 2516 9614 23084 18542 18542 1 51626 0 LTHVQRQEAAQSR KADKNRARVEENFLKLTHVQRQEAAQSRRE LKLTHVQRQEAAQSRREEKKRAEKERIMNE K L T S R R 2 2 0 0 0 3 1 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 13 1 1522.7964 Q96A33 Q96A33 420 432 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 0.013256 84.352 By MS/MS 6.5 0.5 1 1 2 1222000 1222000 0 9305 2101 9615 23085;23086 18543 18543 1 9096.3 0 LTHYHEGLPTTR IRAPRKGWTLMHPGRLTHYHEGLPTTRGTR PGRLTHYHEGLPTTRGTRYIAVSFVDP___ R L T T R G 0 1 0 0 0 0 1 1 2 0 2 0 0 0 1 0 3 0 1 0 0 0 12 0 1423.7208 Q02809 Q02809 704 715 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 3 0.014456 109.39 By MS/MS 5.5 0.5 1 1 2 1370900 1370900 0 9306 1280 9616 23087;23088 18544;18545 18544 2 12464 0 LTIAEER GNKPWISLPRGKGIRLTIAEERDKRLAAKQ LPRGKGIRLTIAEERDKRLAAKQSSG____ R L T E R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 830.44978 P62701;Q8TD47 P62701 246 252 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.041333 96.19 By MS/MS 8.5 1.12 1 1 1 1 4 42733000 42733000 0 9307 1165 9617 23089;23090;23091;23092 18546 18546 1 625340 0 LTIAEERDK GNKPWISLPRGKGIRLTIAEERDKRLAAKQ RGKGIRLTIAEERDKRLAAKQSSG______ R L T D K R 1 1 0 1 0 0 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1073.5717 P62701;Q8TD47 P62701 246 254 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.00023686 171.99 By MS/MS 8 0 1 1 1066800 1066800 0 9308 1165 9618 23093 18547 18547 1 13468 0 LTIAEERDKR GNKPWISLPRGKGIRLTIAEERDKRLAAKQ GKGIRLTIAEERDKRLAAKQSSG_______ R L T K R L 1 2 0 1 0 0 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 10 2 1229.6728 P62701;Q8TD47 P62701 246 255 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.0013627 148.52 By MS/MS 8 0 1 1 4966300 4966300 0 9309 1165 9619 23094 18548 18548 1 62699 0 LTISYCR PNGAKQADSDIPLDRLTISYCRSSGPGGQN DSDIPLDRLTISYCRSSGPGGQNVNKVNSK R L T C R S 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 7 0 911.45349 Q14197 Q14197 77 83 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.0065081 149.4 By MS/MS 9 0 1 1 2035700 2035700 0 9310 1431 9620 23095 18549 18549 1 40063 0 LTITSNPEMTFPGER GTDVGQTKAAQALAKLTITSNPEMTFPGER LTITSNPEMTFPGERIYEVVRPLVSLLHLN K L T E R I 0 1 1 0 0 0 2 1 0 1 1 0 1 1 2 1 3 0 0 0 0 0 15 0 1691.8189 Q9H3U1 Q9H3U1 715 729 UNC45A Protein unc-45 homolog A yes yes 2 0.00061579 158.25 By MS/MS 4 0 1 1 1026500 1026500 0 9311 2442 9621 23096 18550 18550 1 96599 0 LTLADIER DILYQLADLYNASGRLTLADIERIAPLAEG LYNASGRLTLADIERIAPLAEGALPYNLAE R L T E R I 1 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 929.5182 O75746 O75746 284 291 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0032547 133.58 By MS/MS 6 0.816 1 1 1 3 7463600 7463600 0 9312 344 9622 23097;23098;23099 18551 18551 1 74053 0 LTLDDIER VLEQLQRDYERSLSRLTLDDIERLASRFLH YERSLSRLTLDDIERLASRFLHPEVTETME R L T E R L 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 973.50803 P11441 P11441 130 137 UBL4A Ubiquitin-like protein 4A yes yes 2 0.050133 82.426 By MS/MS 9.5 0.5 1 1 2 784340 784340 0 9313 579 9623 23100;23101 18552 18552 1 31760 0 LTLDKLDVK ______________________________ MSLSNKLTLDKLDVKGKRVVMRVDFNVPMK K L T V K G 0 0 0 2 0 0 0 0 0 0 3 2 0 0 0 0 1 0 0 1 0 0 9 1 1043.6227 P00558 P00558 7 15 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.01049 119.75 By MS/MS 7 0 1 1 1311700 1311700 0 9314 447 9624 23102 18553 18553 1 20592 0 LTLDTIFVPNTGK GTEISWENKLAEGLKLTLDTIFVPNTGKKS LKLTLDTIFVPNTGKKSGKLKASYKRDCFS K L T G K K 0 0 1 1 0 0 0 1 0 1 2 1 0 1 1 0 3 0 0 1 0 0 13 0 1417.7817 Q9Y277 Q9Y277 97 109 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 5.124E-06 199.82 By MS/MS 8 0 1 1 464430 464430 0 9315 2818 9625 23103 18554 18554 1 5863.3 0 LTLIDPETLLPR AEEGTRNVVAECLGKLTLIDPETLLPRLKG LGKLTLIDPETLLPRLKGYLISGSSYARSS K L T P R L 0 1 0 1 0 0 1 0 0 1 4 0 0 0 2 0 2 0 0 0 0 0 12 0 1379.8024 Q86VP6 Q86VP6 958 969 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00083317 128.27 By MS/MS 4 0 1 1 127080 127080 0 9316 1831 9626 23104 18555;18556 18556 2 11959 0 LTLISEDIK QKEEKEMIFEDTNLKLTLISEDIKSYYTVR EDTNLKLTLISEDIKSYYTVRQLELENLTT K L T I K S 0 0 0 1 0 0 1 0 0 2 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1030.591 P18031 P18031 142 150 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.012513 96.034 By MS/MS By matching 6.33 0.471 2 1 2 1 6503700 6456800 46929 9317 649 9627 23105;23106;23107 18557 18557 1 51000 48089 LTLLHYDPVVK TGFCFNTKRNRLREKLTLLHYDPVVKQRVL LREKLTLLHYDPVVKQRVLFVEKKKIRSL_ K L T V K Q 0 0 0 1 0 0 0 0 1 0 3 1 0 0 1 0 1 0 1 2 0 0 11 0 1296.7442 O75394 O75394 41 51 MRPL33 39S ribosomal protein L33, mitochondrial yes yes 2 0.00025906 137.95 By MS/MS 10 0 1 1 193940 193940 0 9318 322 9628 23108 18558 18558 1 10453 0 LTLLQVASR QNQQLLRENEIIKQKLTLLQVASRQKHLPK EIIKQKLTLLQVASRQKHLPKDTLLSPDSS K L T S R Q 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 999.60768 O95239 O95239 994 1002 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 8.7291E-07 182.39 By MS/MS 3 0 1 1 188800 188800 0 9319 397 9629 23109 18559 18559 1 3454.5 0 LTLSALLDGK LIGLGYTQTLKPGIKLTLSALLDGKNVNAG KPGIKLTLSALLDGKNVNAGGHKLGLGLEF K L T G K N 1 0 0 1 0 0 0 1 0 0 4 1 0 0 0 1 1 0 0 0 0 0 10 0 1029.607 P21796 P21796 257 266 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 3.2414E-05 159.79 By MS/MS 7.67 0.471 1 2 3 1132300 1132300 0 9320 681 9630 23110;23111;23112 18560;18561;18562;18563 18563 4 14814 0 LTLSALVDGK LIGVGYTQTLRPGVKLTLSALVDGKSINAG RPGVKLTLSALVDGKSINAGGHKVGLALEL K L T G K S 1 0 0 1 0 0 0 1 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 1015.5914 P45880 P45880 268 277 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 7.6792E-11 218.58 By MS/MS By matching 8.6 0.8 3 1 1 4 1 6361400 6303400 58025 9321 903 9631 23113;23114;23115;23116;23117 18564;18565;18566 18565 3 80102 78301 LTLSQFQK QVCFDDDGTSSPQDRLTLSQFQKQLLEDYG TSSPQDRLTLSQFQKQLLEDYGESHFTVNQ R L T Q K Q 0 0 0 0 0 2 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 8 0 963.53893 Q8N1F7 Q8N1F7 435 442 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.0053054 124.08 By MS/MS 4 0 1 1 1412500 1412500 0 9322 1903 9632 23118 18567 18567 1 132930 0 LTLTSDESTLIEDGGAR FYSSIRTSNNSQVNKLTLTSDESTLIEDGG LTSDESTLIEDGGARSDGSLEDGDDVHRAV K L T A R S 1 1 0 2 0 0 2 2 0 1 3 0 0 0 0 2 3 0 0 0 0 0 17 0 1776.8741 Q9NRX5 Q9NRX5 344 360 SERINC1 Serine incorporator 1 yes yes 2 0.00055498 159.66 By MS/MS 1.5 0.5 1 1 2 210130 210130 0 9323 2563 9633 23119;23120 18568 18568 1 55679 0 LTNAGYDYLALK KLIAWERTKTVQGYRLTNAGYDYLALKTLS GYRLTNAGYDYLALKTLSSRQVVESVGNQM R L T L K T 2 0 1 1 0 0 0 1 0 0 3 1 0 0 0 0 1 0 2 0 0 0 12 0 1340.6976 Q9BVS4 Q9BVS4 75 86 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 2 1.8279E-08 206.36 By MS/MS 5 0 1 1 3050000 3050000 0 9324 2339 9634 23121 18569 18569 1 30589 0 LTNLQEGIIPK QLLQLTNLEHDVYERLTNLQEGIIPKKKAA VYERLTNLQEGIIPKKKAATDDDLHRINEL R L T P K K 0 0 1 0 0 1 1 1 0 2 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1224.7078 Q9H0E3 Q9H0E3 969 979 SAP130 Histone deacetylase complex subunit SAP130 yes yes 2 6.3155E-05 140.78 By MS/MS 3 0 1 1 187680 187680 0 9325 2409 9635 23122 18570 18570 0 3434.1 0 LTNSMMMHGR AAKRFRKAQCPIVERLTNSMMMHGRNNGKK PIVERLTNSMMMHGRNNGKKLMTVRIVKHA R L T G R N 0 1 1 0 0 0 0 1 1 0 1 0 3 0 0 1 1 0 0 0 0 0 10 0 1176.5202 P46782 P46782 72 81 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.030536 53.683 By MS/MS 9 0 1 1 116240 116240 0 9326 919 9636 23123 18571 18571 480;481;482 1 2287.6 0 LTNVAVVR ______________________________ TPTNQIRLTNVAVVRMKRAGKRFEIACYKN R L T V R M 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 3 0 0 8 0 870.5287 Q9Y3A5 Q9Y3A5 12 19 SBDS Ribosome maturation protein SBDS yes yes 2 0.00038996 160.63 By MS/MS 8.5 0.5 1 1 2 3039200 3039200 0 9327 2862 9637 23124;23125 18572 18572 1 38721 0 LTPEEEEILNK ESHYALPLGRKKGAKLTPEEEEILNKKRSK KGAKLTPEEEEILNKKRSKKIQKKYDERKK K L T N K K 0 0 1 0 0 0 4 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1313.6715 P62241 P62241 129 139 RPS8 40S ribosomal protein S8 yes yes 2 3.0258E-05 157.99 By MS/MS 8.5 1.12 1 1 1 1 4 41022000 41022000 0 9328 1143 9638 23126;23127;23128;23129 18573;18574;18575;18576 18573 4 577330 0 LTPEEEEILNKK ESHYALPLGRKKGAKLTPEEEEILNKKRSK GAKLTPEEEEILNKKRSKKIQKKYDERKKN K L T K K R 0 0 1 0 0 0 4 0 0 1 2 2 0 0 1 0 1 0 0 0 0 0 12 1 1441.7664 P62241 P62241 129 140 RPS8 40S ribosomal protein S8 yes yes 2 0.0028056 128.51 By MS/MS 8 0 1 1 2031900 2031900 0 9329 1143 9639 23130 18577 18577 1 25652 0 LTPEEEEILNKKR ESHYALPLGRKKGAKLTPEEEEILNKKRSK AKLTPEEEEILNKKRSKKIQKKYDERKKNA K L T K R S 0 1 1 0 0 0 4 0 0 1 2 2 0 0 1 0 1 0 0 0 0 0 13 2 1597.8675 P62241 P62241 129 141 RPS8 40S ribosomal protein S8 yes yes 2;4 2.2317E-05 199.33 By MS/MS 8.8 0.748 2 2 1 5 19625000 19625000 0 9330 1143 9640 23131;23132;23133;23134;23135 18578;18579;18580 18579 3 261260 0 LTPITYPQGLAMAK LRDDKDTIEKLKEKKLTPITYPQGLAMAKE KLTPITYPQGLAMAKEIGAVKYLECSALTQ K L T A K E 2 0 0 0 0 1 0 1 0 1 2 1 1 0 2 0 2 0 1 0 0 0 14 0 1502.8167 P63000 P63000 134 147 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 2 0.00039889 137.4 By MS/MS 9 0 1 1 1192000 1192000 0 9331 1192 9641 23136 18581 18581 691 1 23458 0 LTPLQLEIQR QKSQLQRLLQELRRRLTPLQLEIQRVVEKA ELRRRLTPLQLEIQRVVEKADSWVEKEEPA R L T Q R V 0 1 0 0 0 2 1 0 0 1 3 0 0 0 1 0 1 0 0 0 0 0 10 0 1209.7081 Q8N163 Q8N163 896 905 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.043577 84.213 By MS/MS 3.5 0.5 1 1 2 786820 786820 0 9332 1901 9642 23137;23138 18582 18582 0 45465 0 LTPLSHEVISR PHLSRQDLTTLDVTKLTPLSHEVISRQATI DVTKLTPLSHEVISRQATINIGTIGHVAHG K L T S R Q 0 1 0 0 0 0 1 0 1 1 2 0 0 0 1 2 1 0 0 1 0 0 11 0 1250.6983 P41091;Q2VIR3 P41091 28 38 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.049142 70.412 By MS/MS 10 0 1 1 1861600 1861600 0 9333 866 9643 23139 18583 18583 1 100340 0 LTPMEALLQTR CASLLTAVSRQLQDRLTPMEALLQTRYGLY LQDRLTPMEALLQTRYGLYSSPFDPVLFDL R L T T R Y 1 1 0 0 0 1 1 0 0 0 3 0 1 0 1 0 2 0 0 0 0 0 11 0 1271.6908 Q9NR09 Q9NR09 1485 1495 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.023409 83.862 By MS/MS 2 0 1 1 70141 70141 0 9334 2543 9644 23140 18584 18584 1 23724 0 LTPQMFQQLMK KTQDLFRRVRSILNKLTPQMFQQLMKQVTQ ILNKLTPQMFQQLMKQVTQLAIDTEERLKG K L T M K Q 0 0 0 0 0 3 0 0 0 0 2 1 2 1 1 0 1 0 0 0 0 0 11 0 1363.6992 Q04637 Q04637 771 781 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00012976 145.25 By MS/MS 2.57 0.728 4 2 1 7 8825500 8825500 0 9335 1291 9645;9646;9647 23141;23142;23143;23144;23145;23146;23147 18585;18586;18587;18588 18585 773;774 4 2818900 0 LTPVSPESSSTEEK IEVDIDVEHGGKRSRLTPVSPESSSTEEKS RLTPVSPESSSTEEKSSSQPSSCCSDPSKP R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 Q13501 Q13501 268 281 SQSTM1 Sequestosome-1 yes yes 2 0.053423 83.397 By matching By MS/MS 7 0.816 1 1 1 2 1 320840 225300 95546 9336 1391 9648 23148;23149;23150 18589 18589 1 3336.8 97908 LTPYEVDELRR KFEKNFYVEHPEVARLTPYEVDELRRKKEI EVARLTPYEVDELRRKKEITVRGGDVCPKP R L T R R K 0 2 0 1 0 0 2 0 0 0 2 0 0 0 1 0 1 0 1 1 0 0 11 1 1389.7252 Q92841 Q92841 144 154 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.032924 83.647 By MS/MS 5 0 1 1 1423100 1423100 0 9337 2073 9649 23151 18590 18590 1 14272 0 LTQDAVAK YLVMLKAIRILVQERLTQDAVAKANQTKEG RILVQERLTQDAVAKANQTKEGLPVALDKH R L T A K A 2 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 844.46543 Q9Y224 Q9Y224 164 171 C14orf166 UPF0568 protein C14orf166 yes yes 2 0.016025 104.06 By MS/MS 8 0 1 1 2863900 2863900 0 9338 2809 9650 23152 18591 18591 1 36157 0 LTQDQDVDVK DNSTLQSEVKPILEKLTQDQDVDVKYFAQE PILEKLTQDQDVDVKYFAQEALTVLSLA__ K L T V K Y 0 0 0 3 0 2 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1159.5721 P30153 P30153 567 576 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 1.7028E-10 209.73 By MS/MS 5.5 0.5 1 1 2 1220600 1220600 0 9339 769 9651 23153;23154 18592;18593 18592 2 9553.5 0 LTQECGEDLSK FSKNYRVRRNMIQSRLTQECGEDLSKQEVD IQSRLTQECGEDLSKQEVDKVLKDCCVSYG R L T S K Q 0 0 0 1 1 1 2 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1278.5762 Q9NVU0 Q9NVU0 672 682 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 1.1854E-09 220.82 By MS/MS 5 0 1 1 1032900 1032900 0 9340 2603 9652 23155 18594 18594 1 10360 0 LTQEETNFK QTEQELKEKEKELQKLTQEETNFKSLVHDL EKELQKLTQEETNFKSLVHDLFQKVEEAKS K L T F K S 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 9 0 1108.5401 Q9NTJ3 Q9NTJ3 565 573 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.00011522 159.28 By MS/MS 3.5 0.5 1 1 2 1195200 1195200 0 9341 2575 9653 23156;23157 18595 18595 1 28249 0 LTQEQVSDSQVLIR MIRHYVSILLQSDKKLTQEQVSDSQVLIRS KLTQEQVSDSQVLIRSRVLRENGKYIPKQS K L T I R S 0 1 0 1 0 3 1 0 0 1 2 0 0 0 0 2 1 0 0 2 0 0 14 0 1614.8577 Q9P0I2 Q9P0I2 44 57 EMC3 ER membrane protein complex subunit 3 yes yes 2 7.0745E-34 351.39 By MS/MS 9 0.816 1 1 1 3 8368300 8368300 0 9342 2663 9654 23158;23159;23160 18596 18596 1 113010 0 LTQEVLLLR QMQLVDPEDIPAMERLTQEVLLLREKVASV IPAMERLTQEVLLLREKVASVESQGQEISG R L T L R E 0 1 0 0 0 1 1 0 0 0 4 0 0 0 0 0 1 0 0 1 0 0 9 0 1083.6652 Q5VU43 Q5VU43 830 838 PDE4DIP Myomegalin yes yes 2 0.0020252 120.99 By MS/MS 3 0 1 1 89712 89712 0 9343 1649 9655 23161 18597 18597 1 1641.5 0 LTQGETLR YLFGWMVPPKISLLKLTQGETLRKLYEQHH PKISLLKLTQGETLRKLYEQHHVVQDMLVP K L T L R K 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 8 0 916.49779 Q15392 Q15392 368 375 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0057139 122.19 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 13700000 13700000 0 9344 1507 9656 23162;23163;23164;23165;23166;23167 18598;18599 18598 2 810080 0 LTQNADCVVVLDNTALNR DVVVQPYNSLLTLKRLTQNADCVVVLDNTA NADCVVVLDNTALNRIATDRLHIQNPSFSQ R L T N R I 2 1 3 2 1 1 0 0 0 0 3 0 0 0 0 0 2 0 0 3 0 0 18 0 2015.0106 P23258;Q9NRH3 P23258 195 212 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 1.671E-33 299.27 By MS/MS 7 0.816 1 1 1 3 8798600 8798600 0 9345 701 9657 23168;23169;23170 18600;18601 18600 2 92598 0 LTQYIDGQGRPR VHVIGEDAACIAYIRLTQYIDGQGRPRTSQ YIRLTQYIDGQGRPRTSQSEETRVWHRRDG R L T P R T 0 2 0 1 0 2 0 2 0 1 1 0 0 0 1 0 1 0 1 0 0 0 12 1 1402.7317 Q13555;Q13554 Q13555 514 525 CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 3 0.026191 73.887 By MS/MS 6 0 1 1 1515100 1515100 0 9346 1396 9658 23171 18602 18602 1 10415 0 LTRDETNYGIPQR MILSASRDKTIIMWKLTRDETNYGIPQRAL WKLTRDETNYGIPQRALRGHSHFVSDVVIS K L T Q R A 0 2 1 1 0 1 1 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 13 1 1561.7849 P63244 P63244 45 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2;3 0.00016614 180.66 By MS/MS By matching 8.67 0.745 3 2 1 5 1 31210000 31108000 102260 9347 1202 9659 23172;23173;23174;23175;23176;23177 18603;18604 18604 2 405110 137990 LTRGEADRDTYR GRPRPKGLEGERPARLTRGEADRDTYRRSA PARLTRGEADRDTYRRSAVPPGADKKAEAG R L T Y R R 1 3 0 2 0 0 1 1 0 0 1 0 0 0 0 0 2 0 1 0 0 0 12 2 1451.7117 P46783 P46783 117 128 RPS10 40S ribosomal protein S10 yes yes 2 0.0024918 128.01 By MS/MS 9.5 0.5 1 1 2 1028800 1028800 0 9348 920 9660 23178;23179 18605 18605 1 22557 0 LTSAVSSLPELLEK EDEGAISMLSDNTAKLTSAVSSLPELLEKK KLTSAVSSLPELLEKKRLIDLHTNVATAVL K L T E K K 1 0 0 0 0 0 2 0 0 0 4 1 0 0 1 3 1 0 0 1 0 0 14 0 1485.829 Q8WVM8 Q8WVM8 382 395 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 4.9672E-05 187.85 By MS/MS 6 0.816 1 1 1 3 7806200 7806200 0 9349 2028 9661 23180;23181;23182 18606;18607 18606 2 74276 0 LTSDDVKEQIYK QSALPYRRSVPTWLKLTSDDVKEQIYKLAK WLKLTSDDVKEQIYKLAKKGLTPSQIGVIL K L T Y K L 0 0 0 2 0 1 1 0 0 1 1 2 0 0 0 1 1 0 1 1 0 0 12 1 1437.7351 P62277 P62277 28 39 RPS13 40S ribosomal protein S13 yes yes 2;3 8.3397E-12 238.86 By MS/MS By matching 9.38 0.484 5 3 6 2 51207000 51134000 73567 9350 1151 9662 23183;23184;23185;23186;23187;23188;23189;23190 18608;18609;18610;18611;18612 18610 5 1592000 167760 LTSDSTVYDYAGK VSTEAPPIIFATPTKLTSDSTVYDYAGKNK TKLTSDSTVYDYAGKNKVPELQKFFQKADG K L T G K N 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 2 2 0 2 1 0 0 13 0 1418.6565 O14548 O14548 45 57 COX7A2L Cytochrome c oxidase subunit 7A-related protein, mitochondrial yes yes 2 1.3918E-07 208.15 By MS/MS 10 0 1 1 1953600 1953600 0 9351 126 9663 23191 18613 18613 1 105290 0 LTSEPQPQR ESGVQHKPSAPQGGRLTSEPQPQREGCGC_ APQGGRLTSEPQPQREGCGC__________ R L T Q R E 0 1 0 0 0 2 1 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0 9 0 1054.5407 P61106 P61106 202 210 RAB14 Ras-related protein Rab-14 yes yes 2 0.01534 91.069 By MS/MS 8 0 1 1 431120 431120 0 9352 1110 9664 23192 18614 18614 1 5442.9 0 LTSFITVFK KKSAKGMTENEVEDRLTSFITVFKYIDDKD NEVEDRLTSFITVFKYIDDKDVFQKFYARM R L T F K Y 0 0 0 0 0 0 0 0 0 1 1 1 0 2 0 1 2 0 0 1 0 0 9 0 1054.6063 Q13617 Q13617 415 423 CUL2 Cullin-2 yes yes 2 0.037059 81.548 By MS/MS 4 0 1 1 72223 72223 0 9353 1403 9665 23193 18615 18615 1 6796.7 0 LTSLGVIGALVK FLHTVSKTRPFEYLRLTSLGVIGALVKTDE YLRLTSLGVIGALVKTDEQEVINFLLTTEI R L T V K T 1 0 0 0 0 0 0 2 0 1 3 1 0 0 0 1 1 0 0 2 0 0 12 0 1169.7384 Q92600 Q92600 137 148 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 2.6328E-05 174.86 By MS/MS 8 0 1 1 238820 238820 0 9354 2060 9666 23194 18616 18616 1 3015.1 0 LTSLNEEYTK TVDIQKNGVKFTNSKLTSLNEEYTKNKTEY FTNSKLTSLNEEYTKNKTEYEEAQDAIVKE K L T T K N 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1196.5925 P43246 P43246 556 565 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0055163 104.42 By MS/MS 4 0 1 1 2731300 2731300 0 9355 894 9667 23195 18617 18617 1 257040 0 LTSLVPFVDAFQLER LQQVSQIYQSIEFSRLTSLVPFVDAFQLER LTSLVPFVDAFQLERAIVDAARHCDLQVRI R L T E R A 1 1 0 1 0 1 1 0 0 0 3 0 0 2 1 1 1 0 0 2 0 0 15 0 1733.9352 Q14152 Q14152 455 469 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00066588 129.74 By MS/MS 6 0 1 1 153200 153200 0 9356 1422 9668 23196 18618 18618 1 1053.1 0 LTSNPLASHDYILK QNIHGAFNALGGADRLTSNPLASHDYILKI RLTSNPLASHDYILKIVPTVYEDKSGKQRY R L T L K I 1 0 1 1 0 0 0 0 1 1 3 1 0 0 1 2 1 0 1 0 0 0 14 0 1570.8355 Q969X5 Q969X5 177 190 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2;3 0.00047967 142.89 By MS/MS 7.67 0.471 1 2 3 4146900 4146900 0 9357 2097 9669 23197;23198;23199 18619;18620 18620 2 53177 0 LTSSAEDEVETTYSR PPLGLHQPPVRADWKLTSSAEDEVETTYSR LTSSAEDEVETTYSRFQDLIRELSHRDQSE K L T S R F 1 1 0 1 0 0 3 0 0 0 1 0 0 0 0 3 3 0 1 1 0 0 15 0 1686.7584 P42694 P42694 1561 1575 HELZ Probable helicase with zinc finger domain yes yes 2 3.2607E-22 205.02 By MS/MS 2 0 1 1 113680 113680 0 9358 884 9670 23200 18621 18621 0 38452 0 LTSSLEAGLQR VFNKLTLLTDPPTARLTSSLEAGLQRDLLM PTARLTSSLEAGLQRDLLMHSRRGT_____ R L T Q R D 1 1 0 0 0 1 1 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1173.6354 Q9H270 Q9H270 921 931 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 0.0059597 101.38 By MS/MS 4 0 1 1 682680 682680 0 9359 2428 9671 23201 18622 18622 1 64245 0 LTSSLTTK RYEDFSNLGTTHLLRLTSSLTTKGASSFKI GTTHLLRLTSSLTTKGASSFKITRGIEAVG R L T T K G 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 2 3 0 0 0 0 0 8 0 849.48075 P22695 P22695 85 92 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.020914 98.629 By MS/MS By matching 7.33 0.471 2 1 2 1 6512300 6478500 33816 9360 696 9672 23202;23203;23204 18623 18623 1 101100 60901 LTTDPDLILEVLR FIPIWTVANMEEIKKLTTDPDLILEVLRSS KKLTTDPDLILEVLRSSPMVQVDEKGEKVR K L T L R S 0 1 0 2 0 0 1 0 0 1 4 0 0 0 1 0 2 0 0 1 0 0 13 0 1496.845 Q71RC2 Q71RC2 166 178 LARP4 La-related protein 4 yes yes 2 0.00014606 152.7 By MS/MS 5 0.816 1 1 1 3 924960 924960 0 9361 1750 9673 23205;23206;23207 18624;18625;18626;18627;18628 18624 5 61328 0 LTTLELLEVR KSAATWDERFSALERLTTLELLEVRRQQEE SALERLTTLELLEVRRQQEEEERKRRPPSP R L T V R R 0 1 0 0 0 0 2 0 0 0 4 0 0 0 0 0 2 0 0 1 0 0 10 0 1185.6969 Q01082 Q01082 2079 2088 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 2 0.0020335 125.71 By MS/MS 2 0 1 1 0 0 0 9362 1265 9674 23208 18629 18629 1 0 0 LTTQAYCK ______________________________ ______________________________ K L T C K M 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 2 0 1 0 0 0 8 0 983.47462 O43402 O43402 6 13 EMC8 ER membrane protein complex subunit 8 yes yes 2 0.03615 87.754 By MS/MS 9 0 1 1 511510 511510 0 9363 208 9675 23209 18630 18630 1 10067 0 LTVADALEPVQFEDGQK LSKVSILESLDKWERLTVADALEPVQFEDG VADALEPVQFEDGQKIVVQGEPGDEFFIIL R L T Q K I 2 0 0 2 0 2 2 1 0 0 2 1 0 1 1 0 1 0 0 2 0 0 17 0 1858.9313 P10644 P10644 265 281 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 6.1093E-18 269.95 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 12022000 11959000 63004 9364 567 9676 23210;23211;23212 18631;18632;18633;18634;18635 18635 5 85567 64562 LTVAENEAETK KSCQFVAVRRDTGEKLTVAENEAETKLQAI TGEKLTVAENEAETKLQAILEDIQVTLFTR K L T T K L 2 0 1 0 0 0 3 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1203.5983 P07814 P07814 1390 1400 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 2.1006E-05 190.57 By MS/MS 3 0.816 1 1 1 3 1995500 1995500 0 9365 512 9677 23213;23214;23215 18636 18636 1 109990 0 LTVDDFEFR DQDLVVRIETATTLKLTVDDFEFRTDQFLP TATTLKLTVDDFEFRTDQFLPYLETMFTLL K L T F R T 0 1 0 2 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 9 0 1140.5451 Q9UI26 Q9UI26 541 549 IPO11 Importin-11 yes yes 2 0.0022754 117.81 By MS/MS 4 0 1 1 676930 676930 0 9366 2736 9678 23216 18637 18637 1 63704 0 LTVEDPVTVEYITR RIVINRARVECQSHRLTVEDPVTVEYITRY RLTVEDPVTVEYITRYIASLKQRYTQSNGR R L T T R Y 0 1 0 1 0 0 2 0 0 1 1 0 0 0 1 0 3 0 1 3 0 0 14 0 1633.8563 O14818;Q8TAA3 O14818 96 109 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 2 3.6443E-07 200.93 By MS/MS By MS/MS 5.5 2.5 1 1 1 1 7032400 6939200 93201 9367 140 9679 23217;23218 18638;18639 18639 2 87607 11863 LTVLLPLAAAER RVEILPVPYVTEASRLTVLLPLAAAERDLA ASRLTVLLPLAAAERDLAPGFLEAFATAAL R L T E R D 3 1 0 0 0 0 1 0 0 0 4 0 0 0 1 0 1 0 0 1 0 0 12 0 1265.7707 Q8IZ52 Q8IZ52 508 519 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.00033198 141.88 By MS/MS 4 0 1 1 328980 328980 0 9368 1890 9680 23219 18640 18640 1 30959 0 LTVNDFVR LLPQLLGVAPEKAIKLTVNDFVRDKFMHKD APEKAIKLTVNDFVRDKFMHKDGSVPLAAE K L T V R D 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 962.51853 Q9UJS0;O75746 Q9UJS0 409 416 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.0045756 127.46 By MS/MS 4.83 2.54 1 1 1 1 1 1 6 40277000 40277000 0 9369 2748;344 9681 23220;23221;23222;23223;23224;23225 18641;18642;18643;18644;18645 18641 5 514190 0 LTVSSLDYSR LLNLCSLKNQDHLLKLTVSSLDYSRDGLAR DHLLKLTVSSLDYSRDGLARVILSKILTAA K L T S R D 0 1 0 1 0 0 0 0 0 0 2 0 0 0 0 3 1 0 1 1 0 0 10 0 1139.5823 Q6R327 Q6R327 700 709 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.046202 74.165 By MS/MS 2.5 0.5 1 1 2 702330 702330 0 9370 1724 9682 23226;23227 18646 18646 1 172780 0 LTVVDTPGYGDAINCR EASTVEIEERGVKLRLTVVDTPGYGDAINC TVVDTPGYGDAINCRDCFKTIISYIDEQFE R L T C R D 1 1 1 2 1 0 0 2 0 1 1 0 0 0 1 0 2 0 1 2 0 0 16 0 1749.8356 Q15019 Q15019 97 112 SEPT2 Septin-2 yes yes 2 1.2424E-44 336.16 By MS/MS 7 0 1 1 1786800 1786800 0 9371 1472 9683 23228 18647 18647 1 28049 0 LTWHSCPEDEAQ NMKCPQIVIAFYEERLTWHSCPEDEAQ___ EERLTWHSCPEDEAQ_______________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 0.00034884 140.78 By MS/MS 9.5 0.5 1 1 2 2049100 2049100 0 9372 1362 9684 23229;23230 18648 18648 1 48108 0 LTWLQNMAGK MYRIAKGYQTSPDLRLTWLQNMAGKHSERS SPDLRLTWLQNMAGKHSERSNHAEAAQCLV R L T G K H 1 0 1 0 0 1 0 1 0 0 2 1 1 0 0 0 1 1 0 0 0 0 10 0 1160.6012 Q96N67;Q96HP0 Q96N67 1688 1697 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 0.00049144 133.13 By MS/MS 2 0 1 1 419160 419160 0 9373 2201;2166 9685 23231 18649 18649 1023 1 141780 0 LTYEIEDEKR KCYGQIKELNEKITRLTYEIEDEKRRRKSV EKITRLTYEIEDEKRRRKSVEDRFDQQKND R L T K R R 0 1 0 1 0 0 3 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 10 1 1294.6405 P15924 P15924 1114 1123 DSP Desmoplakin yes yes 2;3 6.5146E-19 232.83 By matching By MS/MS 2.6 0.49 2 3 1 4 2448800 136060 2312700 9374 628 9686 23232;23233;23234;23235;23236 18650;18651;18652 18652 3 2489.5 350160 LTYEIEDEKRR KCYGQIKELNEKITRLTYEIEDEKRRRKSV KITRLTYEIEDEKRRRKSVEDRFDQQKNDY R L T R R R 0 2 0 1 0 0 3 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 11 2 1450.7416 P15924 P15924 1114 1124 DSP Desmoplakin yes yes 3 0.041695 70.552 By MS/MS 2.5 1.12 1 1 1 1 4 1519200 1519200 0 9375 628 9687 23237;23238;23239;23240 18653 18653 1 267590 0 LTYQDAVNLQNYVEEK KYNHLVYSQIPAAVKLTYQDAVNLQNYVEE TYQDAVNLQNYVEEKLIPTWNWMVSIMDST K L T E K L 1 0 2 1 0 2 2 0 0 0 2 1 0 0 0 0 1 0 2 2 0 0 16 0 1925.9371 O95071 O95071 1819 1834 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 8.6384E-63 315.29 By MS/MS 2 0 1 1 0 0 0 9376 384 9688 23241 18654 18654 1 0 0 LVAAEQQK ______________________________ DEAELQRLVAAEQQKAQFTAQVHHFMELCW R L V Q K A 2 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 885.49198 Q9Y5J9 Q9Y5J9 15 22 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 0.053375 81.191 By MS/MS 10 0 1 1 1636100 1636100 0 9377 2911 9689 23242 18655 18655 1 88177 0 LVAAFGELR LRQYGPNVPEPILQKLVAAFGELRSLADQG EPILQKLVAAFGELRSLADQGIINYPYSTR K L V L R S 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 974.55492 A3KMH1 A3KMH1 955 963 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0021602 119.27 By MS/MS 3.5 1.12 1 1 1 1 4 1704100 1704100 0 9378 14 9690 23243;23244;23245;23246 18656;18657;18658 18656 3 282390 0 LVAASQAALGL KADDKETCFAEEGKKLVAASQAALGL____ EGKKLVAASQAALGL_______________ K L V G L - 4 0 0 0 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1012.5917 CON__P02768-1;P02768 CON__P02768-1 599 609 ALB Serum albumin yes no 2 0.025579 93.649 By MS/MS 6 0 1 1 107550 0 107550 + 9379 42 9691 23247 18659 18659 1 0 110210 LVAGEMGQNEPDQGGQR RVLDVNLMGTFNVIRLVAGEMGQNEPDQGG AGEMGQNEPDQGGQRGVIINTASVAAFEGQ R L V Q R G 1 1 1 1 0 3 2 4 0 0 1 0 1 0 1 0 0 0 0 1 0 0 17 0 1784.8112 Q99714 Q99714 131 147 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 5.1414E-05 195.87 By MS/MS 8 0 1 1 742780 742780 0 9380 2261 9692 23248 18660 18660 1 9377.5 0 LVAIVDPHIK QPRTMLERLASKRRKLVAIVDPHIKVDSGY SKRRKLVAIVDPHIKVDSGYRVHEELRNLG K L V I K V 1 0 0 1 0 0 0 0 1 2 1 1 0 0 1 0 0 0 0 2 0 0 10 0 1103.6703 Q14697 Q14697 463 472 GANAB Neutral alpha-glucosidase AB yes yes 2;3 0.0065108 99.688 By MS/MS 4 0 2 2 1263500 1263500 0 9381 1454 9693 23249;23250 18661;18662 18661 1 118900 0 LVAIVDVIDQNR VGRVAYVSFGPHAGKLVAIVDVIDQNRALV AGKLVAIVDVIDQNRALVDGPCTQVRRQAM K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914 P50914 24 35 RPL14 60S ribosomal protein L14 yes yes 2 4.5104E-07 206.73 By MS/MS 8 0 1 1 5927100 5927100 0 9382 983 9694 23251 18663 18663 1 74829 0 LVALNLDR QLGSYDPLPNSHGEKLVALNLDRIRHWIGC PNSHGEKLVALNLDRIRHWIGCGAHLSKPM K L V D R I 1 1 1 1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 912.53927 Q9Y3D3 Q9Y3D3 65 72 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.0041527 131.03 By MS/MS 10 0 1 1 8653300 8653300 0 9383 2871 9695 23252 18664 18664 1 466380 0 LVANNEVCVK QMKPTYLTRHVKPERLVANNEVCVKLVADA VKPERLVANNEVCVKLVADAVERHALRAEN R L V V K L 1 0 2 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 10 0 1144.591 Q9NVR0 Q9NVR0 311 320 KLHL11 Kelch-like protein 11 yes yes 2 0.0012002 119.75 By MS/MS 5 0 1 1 818620 818620 0 9384 2601 9696 23253 18665 18665 1 8210.4 0 LVATAMK TGTVCHVGKMKDWERLVATAMKLHGVIDIL GKMKDWERLVATAMKLHGVIDILSLSITNS R L V M K L 2 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 7 0 732.4204 P0CG22 P0CG22 99 105 DHRS4L1 Putative dehydrogenase/reductase SDR family member 4-like 1 yes yes 2 0.035891 99.384 By MS/MS 8 0 1 1 775420 775420 0 9385 547 9697 23254 18666 18666 239 1 9789.7 0 LVDEEPQLTKR WPGDILAYKEHLKSKLVDEEPQLTKRTHNV LKSKLVDEEPQLTKRTHNV___________ K L V K R T 0 1 0 1 0 1 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 11 1 1326.7143 Q9UG63 Q9UG63 609 619 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0023718 110.54 By MS/MS 5 0 1 1 0 0 0 9386 2719 9698 23255 18667 18667 1 0 0 LVDEYSLNAGK GDNGCLDDIRTHYDRLVDEYSLNAGKQRYE HYDRLVDEYSLNAGKQRYEKMISGMYLGEI R L V G K Q 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1207.6085 P19367 P19367 728 738 HK1 Hexokinase-1 yes yes 2 2.4851E-05 159.34 By MS/MS 4 0 1 1 1887400 1887400 0 9387 660 9699 23256 18668 18668 1 177620 0 LVDSVKENAGTVR LFRHQDVATRSRYVRLVDSVKENAGTVRIF VRLVDSVKENAGTVRIFSSLHVSGEQLSQL R L V V R I 1 1 1 1 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 3 0 0 13 1 1386.7467 Q9BRX2 Q9BRX2 332 344 PELO Protein pelota homolog yes yes 2 5.2217E-05 179.6 By MS/MS 7 0 1 1 1614300 1614300 0 9388 2301 9700 23257 18669 18669 1 25342 0 LVDVPFQVEFPAPK NARCLVNGLSLDHSKLVDVPFQVEFPAPKN KLVDVPFQVEFPAPKNELVQKFQVYYLGNV K L V P K N 1 0 0 1 0 1 1 0 0 0 1 1 0 2 3 0 0 0 0 3 0 0 14 0 1584.8552 O00213 O00213 523 536 APBB1 Amyloid beta A4 precursor protein-binding family B member 1 yes yes 2 0.0051924 103.44 By MS/MS 4 0 1 1 101900 101900 0 9389 91 9701 23258 18670;18671 18670 2 9589.1 0 LVEALCAEHQINLIK LCVLASNCDEPMYVKLVEALCAEHQINLIK LVEALCAEHQINLIKVDDNKKLGEWVGLCK K L V I K V 2 0 1 0 1 1 2 0 1 2 3 1 0 0 0 0 0 0 0 1 0 0 15 0 1749.9447 P25398 P25398 64 78 RPS12 40S ribosomal protein S12 yes yes 2 0.00054538 152.47 By MS/MS 10 0 1 1 3024800 3024800 0 9390 721 9702 23259 18672 18672 1 163030 0 LVEALDLFER YWYFLQCKHLIKEGKLVEALDLFERQMLKE IKEGKLVEALDLFERQMLKEERLQPMESNY K L V E R Q 1 1 0 1 0 0 2 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 10 0 1203.6499 O75127 O75127 152 161 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 3.4535E-05 166.07 By MS/MS 4.5 0.5 1 1 2 1945600 1945600 0 9391 293 9703 23260;23261 18673 18673 1 23411 0 LVECLETVLNK LQCYPPPEDAAVKGRLVECLETVLNKAQEP VKGRLVECLETVLNKAQEPPKSKKVQHSNA R L V N K A 0 0 1 0 1 0 2 0 0 0 3 1 0 0 0 0 1 0 0 2 0 0 11 0 1316.701 O95782 O95782 280 290 AP2A1 AP-2 complex subunit alpha-1 yes yes 2 0.006657 109.79 By MS/MS 4 0 1 1 547100 547100 0 9392 425 9704 23262 18674 18674 1 51486 0 LVECQYELTDR IDYARQAGHHELAERLVECQYELTDRLAFY LAERLVECQYELTDRLAFYLCGRKPDHKNG R L V D R L 0 1 0 1 1 1 2 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 11 0 1424.6606 Q9Y2X7 Q9Y2X7 219 229 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 1.521E-06 184.24 By MS/MS 4 0 1 1 1373100 1373100 0 9393 2848 9705 23263 18675 18675 1 129220 0 LVEDEERR IRIWAHEALRLFQDRLVEDEERRWTDENID LRLFQDRLVEDEERRWTDENIDTVALKHFP R L V R R W 0 2 0 1 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 1044.52 Q14204 Q14204 2837 2844 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.019139 122.74 By MS/MS 1.5 0.5 1 1 2 981900 981900 0 9394 1433 9706 23264;23265 18676 18676 1 317970 0 LVEDILSSCKV IRRQRLKGDAWVYKRLVEDILSSCKV____ VYKRLVEDILSSCKV_______________ R L V K V - 0 0 0 1 1 0 1 0 0 1 2 1 0 0 0 2 0 0 0 2 0 0 11 1 1261.6588 Q14680 Q14680 641 651 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.0044063 125.74 By MS/MS 5 0 2 2 0 0 0 9395 1450 9707 23266;23267 18677;18678 18677 2 0 0 LVEDLQEELSSR AKKGVKIKLHKIIYRLVEDLQEELSSRLPC IYRLVEDLQEELSSRLPCAVEEHPVGEASI R L V S R L 0 1 0 1 0 1 3 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1416.7096 P46199 P46199 602 613 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 3.2463E-06 193.22 By MS/MS 5 0 1 1 4774100 4774100 0 9396 910 9708 23268 18679 18679 1 47882 0 LVEDMENKIR ETVSDCSPHIANIGRLVEDMENKIRSTLNE ANIGRLVEDMENKIRSTLNEIYFGKTKDIV R L V I R S 0 1 1 1 0 0 2 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 10 1 1245.6387 P47756 P47756 216 225 CAPZB F-actin-capping protein subunit beta yes yes 2 0.00094386 118.71 By MS/MS 8 0 1 1 804090 804090 0 9397 926 9709 23269 18680 18680 1 10152 0 LVEGPPPPPEPPK RFGIMEKVYCHYFVKLVEGPPPPPEPPKTA VKLVEGPPPPPEPPKTAVAHAKEYIQQLRS K L V P K T 0 0 0 0 0 0 2 1 0 0 1 1 0 0 7 0 0 0 0 1 0 0 13 0 1352.734 Q9NWU5 Q9NWU5 172 184 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.00036777 140.49 By MS/MS 9 0 1 1 3455100 3455100 0 9398 2614 9710 23270 18681 18681 1 67996 0 LVEGPPPPPEPPKTAVAHAK RFGIMEKVYCHYFVKLVEGPPPPPEPPKTA PPPPEPPKTAVAHAKEYIQQLRSRTIVHTL K L V A K E 3 0 0 0 0 0 2 1 1 0 1 2 0 0 7 0 1 0 0 2 0 0 20 1 2031.1153 Q9NWU5 Q9NWU5 172 191 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 4 0.031719 52.612 By MS/MS 9 0 1 1 715550 715550 0 9399 2614 9711 23271 18682 18682 1 14082 0 LVEIIGSR HKEMGIIPSWGGTTRLVEIIGSRQALKVLS SWGGTTRLVEIIGSRQALKVLSGALKLDSK R L V S R Q 0 1 0 0 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 8 0 885.52837 Q9NTX5 Q9NTX5 199 206 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 0.005383 123.72 By MS/MS 8 0 1 1 1838300 1838300 0 9400 2578 9712 23272 18683 18683 1 23209 0 LVEKGETDLIQK EKYKVLPRIHDVLCKLVEKGETDLIQKAMD LCKLVEKGETDLIQKAMDFVSQEQGEMVML K L V Q K A 0 0 0 1 0 1 2 1 0 1 2 2 0 0 0 0 1 0 0 1 0 0 12 1 1371.7609 P42704 P42704 865 876 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 3.6283E-08 222.18 By MS/MS By matching 3.86 0.833 3 2 2 6 1 47913000 47471000 441940 9401 886 9713 23273;23274;23275;23276;23277;23278;23279 18684;18685;18686;18687;18688;18689;18690 18686 7 1398200 56252 LVELCVAK WKFEIHRCIINNTHRLVELCVAKLSQDWFP IINNTHRLVELCVAKLSQDWFPLLELLAMA R L V A K L 1 0 0 0 1 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 0 930.52084 Q93008;O00507 Q93008 155 162 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.026461 92.47 By MS/MS 1.5 0.5 1 1 2 1723600 1723600 0 9402 2085 9714 23280;23281 18691 18691 1 563550 0 LVELQNTR NRRLGEWDLPEAVQRLVELQNTRVPNAEEI LPEAVQRLVELQNTRVPNAEEIF_______ R L V T R V 0 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 8 0 971.53999 Q9BW92 Q9BW92 703 710 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.006969 116.37 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 5401400 5350300 51095 9403 2346 9715 23282;23283;23284 18692;18693 18693 2 52886 42909 LVELQNTRVPNAEEIF NRRLGEWDLPEAVQRLVELQNTRVPNAEEI VELQNTRVPNAEEIF_______________ R L V I F - 1 1 2 0 0 1 3 0 0 1 2 0 0 1 1 0 1 0 0 2 0 0 16 1 1870.9789 Q9BW92 Q9BW92 703 718 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0020591 167.22 By MS/MS 5.5 0.5 1 1 2 3016700 3016700 0 9404 2346 9716 23285;23286 18694;18695 18694 2 28416 0 LVELTQK CDRCVANNQVETLEKLVELTQKLFECDRDQ NQVETLEKLVELTQKLFECDRDQMYYNLLK K L V Q K L 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 7 0 829.49092 P42704;Q9NP80 P42704 942 948 LRPPRC;PNPLA8 Leucine-rich PPR motif-containing protein, mitochondrial;Calcium-independent phospholipase A2-gamma yes no 2 0.010617 133.81 By MS/MS By matching 3.75 0.829 2 1 1 3 1 12517000 12159000 358400 9405 886 9717 23287;23288;23289;23290 18696 18696 1 405170 45619 LVENCVCLLR FIVQAEIGQKDSDSKLVENCVCLLRNLSYQ DSDSKLVENCVCLLRNLSYQVHREIPQAER K L V L R N 0 1 1 0 2 0 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 10 0 1274.6475 O60716 O60716 575 584 CTNND1 Catenin delta-1 yes yes 2 0.000196 147.4 By MS/MS 4.5 0.5 1 1 2 3694700 3694700 0 9406 272 9718 23291;23292 18697;18698 18697 2 307760 0 LVEPQISELNHR QAANLMANRGDHCRKLVEPQISELNHRFAA CRKLVEPQISELNHRFAAISHRIKTGKASI K L V H R F 0 1 1 0 0 1 2 0 1 1 2 0 0 0 1 1 0 0 0 1 0 0 12 0 1433.7627 P11532 P11532 1752 1763 DMD Dystrophin yes yes 3 0.0012176 117.25 By MS/MS By MS/MS 4.25 2.63 2 1 1 1 2 1 6 2 37513000 35709000 1803800 9407 581 9719 23293;23294;23295;23296;23297;23298;23299;23300 18699;18700;18701;18702;18703;18704;18705 18704 7 2235300 1840700 LVEPVGR FPRVAGPRGSGPPMRLVEPVGRPSILKEDN RGSGPPMRLVEPVGRPSILKEDNLKEFDQL R L V G R P 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 7 0 768.44939 P48634 P48634 297 303 PRRC2A Protein PRRC2A yes yes 2 0.054565 88.734 By MS/MS 2 0 1 1 191260 191260 0 9408 938 9720 23301 18706 18706 1 64691 0 LVEQLDIEETEQSK EEQSQNDEDNQGSEKLVEQLDIEETEQSKL KLVEQLDIEETEQSKLPQYLERFKALHSKL K L V S K L 0 0 0 1 0 2 4 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1659.8203 Q92552 Q92552 313 326 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.05399 66.285 By MS/MS 7 0 1 1 756240 756240 0 9409 2054 9721 23302 18707 18707 0 11872 0 LVEQVPDR ALTQGSYLHQRVCWRLVEQVPDRAMEAVLT HQRVCWRLVEQVPDRAMEAVLTGLVEAALG R L V D R A 0 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 8 0 954.51345 Q9Y4R8 Q9Y4R8 255 262 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.00034195 163.15 By MS/MS 4.5 0.5 1 1 2 1387400 1387400 0 9410 2900 9722 23303;23304 18708 18708 1 115450 0 LVESLPQEIK IKNYIQGINLVQAKKLVESLPQEIKANVAK VQAKKLVESLPQEIKANVAKAEAEKIKAAL K L V I K A 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1154.6547 P52815 P52815 164 173 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 0.0010339 133.13 By MS/MS By MS/MS 9 0 2 1 1 11553000 11444000 108790 9411 1024 9723 23305;23306 18709;18710 18710 2 225220 248070 LVEVIPEGAMLR YGRDIGTNLPTLLWKLVEVIPEGAMLRLGM LWKLVEVIPEGAMLRLGMTNPPYILEHLEE K L V L R L 1 1 0 0 0 0 2 1 0 1 2 0 1 0 1 0 0 0 0 2 0 0 12 0 1325.7377 Q5VV42 Q5VV42 278 289 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 0.038333 75.509 By MS/MS 6 0 1 1 1200600 1200600 0 9412 1652 9724 23307 18711 18711 1 8253.1 0 LVFFAEDVGSNK AEFRHDSGYEVHHQKLVFFAEDVGSNKGAI HQKLVFFAEDVGSNKGAIIGLMVGGVVIAT K L V N K G 1 0 1 1 0 0 1 1 0 0 1 1 0 2 0 1 0 0 0 2 0 0 12 0 1324.6663 P05067 P05067 688 699 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 0.00032833 160.77 By MS/MS 3.5 0.5 1 1 2 682100 682100 0 9413 483 9725 23308;23309 18712;18713 18713 2 58360 0 LVFLACCVAPTNPR IRGLRALGVRDLSYRLVFLACCVAPTNPRF RLVFLACCVAPTNPRFGGKELRDEEQTAES R L V P R F 2 1 1 0 2 0 0 0 0 0 2 0 0 1 2 0 1 0 0 2 0 0 14 0 1616.8167 Q14566 Q14566 296 309 MCM6 DNA replication licensing factor MCM6 yes yes 2 1.5469E-05 198.62 By MS/MS 4.5 0.5 1 1 2 1474400 1474400 0 9414 1444 9726 23310;23311 18714 18714 1 128160 0 LVFLEDGTSQVR KFKMPFNNAKKMTHKLVFLEDGTSQVRKEP THKLVFLEDGTSQVRKEPKTYFNGDLKNFR K L V V R K 0 1 0 1 0 1 1 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 12 0 1362.7143 Q8IWC1 Q8IWC1 788 799 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 4.0868E-06 190.57 By MS/MS 3.5 0.5 1 1 2 1039200 1039200 0 9415 1866 9727 23312;23313 18715 18715 1 37774 0 LVFLGEQSVGK MSTGGDFGNPLRKFKLVFLGEQSVGKTSLI RKFKLVFLGEQSVGKTSLITRFMYDSFDNT K L V G K T 0 0 0 0 0 1 1 2 0 0 2 1 0 1 0 1 0 0 0 2 0 0 11 0 1175.655 P20340;Q9NRW1 P20340 16 26 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 2 0.00038979 133.75 By MS/MS 9 0 1 1 1383100 1383100 0 9416 670;2558 9728 23314 18716 18716 1 27220 0 LVFLGLDNAGK SSVLQFLGLYKKSGKLVFLGLDNAGKTTLL KSGKLVFLGLDNAGKTTLLHMLKDDRLGQH K L V G K T 1 0 1 1 0 0 0 2 0 0 3 1 0 1 0 0 0 0 0 1 0 0 11 0 1145.6445 Q9NR31;Q9Y6B6 Q9NR31 28 38 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b yes no 2 1.7636E-05 166.07 By MS/MS 9 0.816 1 1 1 3 9379100 9379100 0 9417 2546 9729 23315;23316;23317 18717;18718;18719;18720 18718 4 185020 0 LVFPQDLLEK NVMVTVAKSFEAPIKLVFPQDLLEKGLEAN EAPIKLVFPQDLLEKGLEANNFAMLGLGDV K L V E K G 0 0 0 1 0 1 1 0 0 0 3 1 0 1 1 0 0 0 0 1 0 0 10 0 1200.6754 Q8TCT9 Q8TCT9 242 251 HM13 Minor histocompatibility antigen H13 yes yes 2 0.051823 71.451 By MS/MS 7 0 1 1 91347 91347 0 9418 1993 9730 23318 18721 18721 1 1434 0 LVFSNVNLK ACSDRPTVIYSSNHKLVFSNVNLKEVNYMC YSSNHKLVFSNVNLKEVNYMCPLNSDGYPD K L V L K E 0 0 2 0 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 9 0 1032.5968 Q16531 Q16531 666 674 DDB1 DNA damage-binding protein 1 yes yes 2 0.025226 86.67 By MS/MS 2.5 1.12 1 1 1 1 4 1326900 1326900 0 9419 1549 9731 23319;23320;23321;23322 18722 18722 1 188670 0 LVGDFTHDQSISQK KILCCISCNSNIQIKLVGDFTHDQSISQKL KLVGDFTHDQSISQKLMAGFVECLDCEDAE K L V Q K L 0 0 0 2 0 2 0 1 1 1 1 1 0 1 0 2 1 0 0 1 0 0 14 0 1573.7736 Q92621 Q92621 933 946 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00044227 145.14 By MS/MS 2 0 1 1 292680 292680 0 9420 2065 9732 23323 18723 18723 1 98996 0 LVGDVDFEGVR VGINRVHDPVTAKPKLVGDVDFEGVRQKAG AKPKLVGDVDFEGVRQKAGYITPVPGGVGP K L V V R Q 0 1 0 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 11 0 1204.6088 P13995 P13995 289 299 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 2 0.001332 114.97 By MS/MS By matching 7 0 2 1 1 6463700 6430000 33713 9421 610 9733 23324;23325 18724 18724 1 100940 60716 LVGEIMQETGTR VEKAFHPFIAGPYNRLVGEIMQETGTRINI YNRLVGEIMQETGTRINIPPPSVNRTEIVF R L V T R I 0 1 0 0 0 1 2 2 0 1 1 0 1 0 0 0 2 0 0 1 0 0 12 0 1332.6708 Q00341 Q00341 244 255 HDLBP Vigilin yes yes 2 4.9414E-05 167.11 By MS/MS 3 0.707 1 2 1 4 2293800 2293800 0 9422 1260 9734;9735 23326;23327;23328;23329 18725;18726;18727 18725 755 3 104650 0 LVGGKDFEQPLAISR TQQIDLQGPGPWGFRLVGGKDFEQPLAISR LVGGKDFEQPLAISRVTPGSKAALANLCIG R L V S R V 1 1 0 1 0 1 1 2 0 1 2 1 0 1 1 1 0 0 0 1 0 0 15 1 1628.8886 O00151 O00151 18 32 PDLIM1 PDZ and LIM domain protein 1 yes yes 2;3 0.016468 92.295 By MS/MS 7.33 0.471 2 1 3 6035900 6035900 0 9423 84 9736 23330;23331;23332 18728;18729 18728 1 93392 0 LVGGTTPGK QGTFHSQQALEYGTKLVGGTTPGKGGQTHL LEYGTKLVGGTTPGKGGQTHLGLPVFNTVK K L V G K G 0 0 0 0 0 0 0 3 0 0 1 1 0 0 1 0 2 0 0 1 0 0 9 0 828.47052 P53597 P53597 82 90 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.045874 77.732 By MS/MS 8 0.816 1 1 1 3 4943700 4943700 0 9424 1032 9737 23333;23334;23335 18730 18730 1 64883 0 LVGIISSR FCGIPITDTGRMGSRLVGIISSRDIDFLKE TGRMGSRLVGIISSRDIDFLKEEEHDCFLE R L V S R D 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 8 0 843.5178 P12268 P12268 154 161 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.02498 94.114 By MS/MS 6 0 1 1 3258600 3258600 0 9425 590 9738 23336 18731 18731 1 22400 0 LVGLEAPSVR EDEEVARRLWAESARLVGLEAPSVREQPLP AESARLVGLEAPSVREQPLPR_________ R L V V R E 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 1 0 0 0 2 0 0 10 0 1039.6026 Q8NBN7 Q8NBN7 316 325 RDH13 Retinol dehydrogenase 13 yes yes 2 0.00086424 126.24 By MS/MS 7.5 0.5 1 1 2 2396700 2396700 0 9426 1941 9739 23337;23338 18732;18733 18732 2 34091 0 LVGPEEALSPGEAR ADSWPQLQDHFSAVKLVGPEEALSPGEARD KLVGPEEALSPGEARDMAMDLCRQDPECEF K L V A R D 2 1 0 0 0 0 3 2 0 0 2 0 0 0 2 1 0 0 0 1 0 0 14 0 1423.7307 O60568 O60568 359 372 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 2 0.017713 85.924 By MS/MS 5 0 1 1 1121400 1121400 0 9427 264 9740 23339 18734 18734 1 11247 0 LVGPEVR EEFLAQHGSEYQSVKLVGPEVRMANADARN GSEYQSVKLVGPEVRMANADARNMGADLCR K L V V R M 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 7 0 768.44939 Q02809 Q02809 349 355 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.036184 100.07 By MS/MS 5 0 1 1 744170 744170 0 9428 1280 9741 23340 18735 18735 1 7463.6 0 LVGQGASAVLLDLPNSGGEAQAK ITGGASGLGLATAERLVGQGASAVLLDLPN VLLDLPNSGGEAQAKKLGNNCVFAPADVTS R L V A K K 4 0 1 1 0 2 1 4 0 0 4 1 0 0 1 2 0 0 0 2 0 0 23 0 2194.1594 Q99714 Q99714 30 52 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2;3 1.4865E-20 333.65 By MS/MS 8 0 2 2 4772800 4772800 0 9429 2261 9742 23341;23342 18736;18737 18736 2 60256 0 LVGSDQETLR PESAIKFMAYEQIKRLVGSDQETLRIHERL EQIKRLVGSDQETLRIHERLVAGSLAGAIA R L V L R I 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1116.5775 Q6KCM7 Q6KCM7 270 279 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 2 0.00036696 135.86 By MS/MS 6.5 0.5 1 1 2 2440300 2440300 0 9430 1685 9743 23343;23344 18738;18739 18739 2 31298 0 LVHIIGALR SPDSIHSVAPENEGRLVHIIGALRTSKLLS PENEGRLVHIIGALRTSKLLSDPNYGVHLP R L V L R T 1 1 0 0 0 0 0 1 1 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 990.63383 Q9BTV4 Q9BTV4 88 96 TMEM43 Transmembrane protein 43 yes yes 2;3 0.0012944 124.08 By MS/MS 7 0 2 2 2028500 2028500 0 9431 2318 9744 23345;23346 18740;18741 18740 2 31843 0 LVIDQIDNGFFSPK GYEAKEYYEALPELKLVIDQIDNGFFSPKQ KLVIDQIDNGFFSPKQPDLFKDIINMLFYH K L V P K Q 0 0 1 2 0 1 0 1 0 2 1 1 0 2 1 1 0 0 0 1 0 0 14 0 1591.8246 P06737 P06737 741 754 PYGL Glycogen phosphorylase, liver form yes yes 2 0.00031612 167.84 By MS/MS 4 0 1 1 127070 127070 0 9432 501 9745 23347 18742 18742 1 11958 0 LVIEEAER SPGKTVTIVVRGSNKLVIEEAERSIHDALC VVRGSNKLVIEEAERSIHDALCVIRCLVKK K L V E R S 1 1 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 957.51311 P50991 P50991 396 403 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0038664 127.56 By MS/MS By matching 6.4 1.02 1 2 1 1 4 1 60467000 60327000 140390 9433 985 9746 23348;23349;23350;23351;23352 18743;18744;18745 18744 3 455480 143860 LVIFNELSSAR ELLSAHKDNLGTTIKLVIFNELSSARNPNN TTIKLVIFNELSSARNPNNMQVLYTALQHS K L V A R N 1 1 1 0 0 0 1 0 0 1 2 0 0 1 0 2 0 0 0 1 0 0 11 0 1247.6874 Q8N201 Q8N201 444 454 INTS1 Integrator complex subunit 1 yes yes 2 0.0010751 120.09 By MS/MS 2 0 1 1 168420 168420 0 9434 1907 9747 23353 18746 18746 1 56966 0 LVIITAGAR KIVSGKDYNVTANSKLVIITAGARQQEGES VTANSKLVIITAGARQQEGESRLNLVQRNV K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes yes 2 0.002202 118.74 By MS/MS 8.5 1.12 1 1 1 1 4 4347800 4347800 0 9435 440 9748 23354;23355;23356;23357 18747;18748 18748 2 62275 0 LVILANNCPALR GYKQTLKMIRQGKAKLVILANNCPALRKSE KAKLVILANNCPALRKSEIEYYAMLAKTGV K L V L R K 2 1 2 0 1 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 12 0 1352.7598 P62888 P62888 45 56 RPL30 60S ribosomal protein L30 yes yes 2 7.3071E-09 218.06 By MS/MS 10 0 1 1 4257200 4257200 0 9436 1182 9749 23358 18749;18750 18749 2 229450 0 LVINGNPITIFQER THGKFHGTVKAENGKLVINGNPITIFQERD KLVINGNPITIFQERDPSKIKWGDAGAEYV K L V E R D 0 1 2 0 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 1 0 0 14 0 1612.8937 P04406 P04406 67 80 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 1.3743E-07 218.94 By MS/MS 7 0 1 1 205290 205290 0 9437 473 9750 23359 18751 18751 1 3222.6 0 LVIVGDGACGK ______________________________ IRKKLVIVGDGACGKTCLLIVFSKDQFPEV K L V G K T 1 0 0 1 1 0 0 3 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1087.5696 P61586;P08134 P61586 8 18 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.00090339 137.14 By MS/MS 9 0 1 1 4360700 4360700 0 9438 1125;518 9751 23360 18752 18752 1 85820 0 LVKDVFISAAER QNVEHVPLSLDRAMRLVKDVFISAAERDVY AMRLVKDVFISAAERDVYTGDALRICIVTK R L V E R D 2 1 0 1 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 2 0 0 12 1 1346.7558 P20618 P20618 202 213 PSMB1 Proteasome subunit beta type-1 yes yes 2 0.015264 109.15 By MS/MS 8 0.816 1 1 1 3 3640500 3640500 0 9439 672 9752 23361;23362;23363 18753 18753 1 58306 0 LVLCEVFK PAAMFRDPFRKDPNKLVLCEVFKYNRRPAE FRKDPNKLVLCEVFKYNRRPAETNLRHTCK K L V F K Y 0 0 0 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 8 0 1006.5521 P15104 P15104 96 103 GLUL Glutamine synthetase yes yes 2 0.033032 88.942 By MS/MS 7 0 1 1 200760 200760 0 9440 622 9753 23364 18754 18754 1 3151.6 0 LVLDPYLLK IGTKMQKTAKVRVTRLVLDPYLLKYFNKRK KVRVTRLVLDPYLLKYFNKRKTYFAHDALQ R L V L K Y 0 0 0 1 0 0 0 0 0 0 4 1 0 0 1 0 0 0 1 1 0 0 9 0 1072.6532 Q9Y2R5 Q9Y2R5 33 41 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 0.012388 96.253 By MS/MS 9.5 0.5 1 1 2 6000900 6000900 0 9441 2840 9754 23365;23366 18755;18756 18756 2 277470 0 LVLDSVKLEA NEKDLEEAEEYKEARLVLDSVKLEA_____ YKEARLVLDSVKLEA_______________ R L V E A - 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 10 1 1085.6332 O75347 O75347 99 108 TBCA Tubulin-specific chaperone A yes yes 2 0.016248 109.44 By MS/MS 10 0 1 1 472920 472920 0 9442 312 9755 23367 18757 18757 1 25489 0 LVLDTVNEVSR QQRQKELKKEVMEHRLVLDTVNEVSRALLE MEHRLVLDTVNEVSRALLELVPWRAREGLD R L V S R A 0 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 11 0 1243.6772 Q9UPN3 Q9UPN3 5617 5627 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 0.03145 79.659 By MS/MS 1 0 1 1 174150 174150 0 9443 2798 9756 23368 18758 18758 1 41964 0 LVLEVAQHLGESTVR PPILNALEVQGRETRLVLEVAQHLGESTVR LVLEVAQHLGESTVRTIAMDGTEGLVRGQK R L V V R T 1 1 0 0 0 1 2 1 1 0 3 0 0 0 0 1 1 0 0 3 0 0 15 0 1649.9101 P06576 P06576 95 109 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 0.00011805 180.3 By MS/MS By MS/MS 6.2 0.4 4 1 3 2 82365000 82257000 107220 9444 497 9757 23369;23370;23371;23372;23373 18759;18760;18761;18762;18763 18761 5 580000 109870 LVLEVLQK NLEYPSPSEVFTKIRLVLEVLQKQLLDLPL EVFTKIRLVLEVLQKQLLDLPLDTDLENEK R L V Q K Q 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 8 0 940.59572 O43264 O43264 298 305 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 1 0.041495 89.142 By MS/MS 4 0 1 1 744030 744030 0 9445 200 9758 23374 18764 18764 0 70019 0 LVLLGESAVGK RPNGPAAGNKICQFKLVLLGESAVGKSSLV CQFKLVLLGESAVGKSSLVLRFVKGQFHEY K L V G K S 1 0 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 0 2 0 0 11 0 1084.6492 P51148;P61020;P20339 P51148 24 34 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 2 8.6756E-05 153.05 By MS/MS 9 0.816 1 1 1 3 9746200 9746200 0 9446 989;669 9759 23375;23376;23377 18765;18766 18765 2 146890 0 LVLMSATGDNER LILLKGLQRLNPALRLVLMSATGDNERFSR ALRLVLMSATGDNERFSRYFGGCPVIKVPG R L V E R F 1 1 1 1 0 0 1 1 0 0 2 0 1 0 0 1 1 0 0 1 0 0 12 0 1304.6395 Q7L2E3 Q7L2E3 587 598 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 2.4152E-06 195.83 By MS/MS 3 0 2 2 2366300 2366300 0 9447 1761 9760;9761 23378;23379 18767;18768 18768 928 2 43296 0 LVLVGDGGTGK ______________________________ VQFKLVLVGDGGTGKTTFVKRHLTGEFEKK K L V G K T 0 0 0 1 0 0 0 4 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1014.571 P62826 P62826 13 23 RAN GTP-binding nuclear protein Ran yes yes 2 0.00076295 126.31 By MS/MS 8.5 0.5 1 1 2 10419000 10419000 0 9448 1172 9762 23380;23381 18769;18770;18771 18769 3 168030 0 LVLVSPTSEQYDSLLR GEALNGEPELDLTSKLVLVSPTSEQYDSLL VLVSPTSEQYDSLLRQMWERMDEGCGETIY K L V L R Q 0 1 0 1 0 1 1 0 0 0 4 0 0 0 1 3 1 0 1 2 0 0 16 0 1818.9727 O00178 O00178 65 80 GTPBP1 GTP-binding protein 1 yes yes 2 8.4722E-05 199.8 By MS/MS 5 0 1 1 473690 473690 0 9449 88 9763 23382 18772 18772 1 4750.9 0 LVMAGETTNSR PGSTVFTEDCNILLKLVMAGETTNSRGQRL ILLKLVMAGETTNSRGQRLPQKGDVEMLCG K L V S R G 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 2 0 0 1 0 0 11 0 1177.5761 P26358 P26358 1197 1207 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0085984 94.409 By MS/MS 2 0 1 1 81650 81650 0 9450 730 9764 23383 18773 18773 1 27617 0 LVNELTEFAK FSQYLQQCPFDEHVKLVNELTEFAKTCVAD DEHVKLVNELTEFAKTCVADESHAGCEKSL K L V A K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1162.6234 CON__P02769 CON__P02769 66 75 yes yes 2 0.00066488 148.56 By MS/MS 5.62 2.5 1 1 1 1 1 1 1 1 8 8609800 8609800 0 + 9451 43 9765 23384;23385;23386;23387;23388;23389;23390;23391 18774;18775;18776 18774 3 137500 0 LVNEVTEFAK FAQYLQQCPFEDHVKLVNEVTEFAKTCVAD EDHVKLVNEVTEFAKTCVADESAENCDKSL K L V A K T 1 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1148.6077 CON__P02768-1;P02768 CON__P02768-1 66 75 ALB Serum albumin yes no 2 0.0036118 133.75 By matching By MS/MS 6.25 2.68 1 1 1 1 2 2 2 2 2 2 2 14 5378000 403030 4974900 + 9452 42 9766 23392;23393;23394;23395;23396;23397;23398;23399;23400;23401;23402;23403;23404;23405;23406;23407 18777;18778;18779;18780;18781;18782;18783 18782 7 16028 5149300 LVNHFVEEFK TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK DFDNRLVNHFVEEFKRKHKKDISQNKRAVR R L V F K R 0 0 1 0 0 0 2 0 1 0 1 1 0 2 0 0 0 0 0 2 0 0 10 0 1260.6503 P0DMV9;P0DMV8 P0DMV9 237 246 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 2.6172E-05 163.88 By MS/MS 5 0 1 1 10758000 10758000 0 9453 550 9767 23408 18784 18784 1 107900 0 LVNHFVEEFKR TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK FDNRLVNHFVEEFKRKHKKDISQNKRAVRR R L V K R K 0 1 1 0 0 0 2 0 1 0 1 1 0 2 0 0 0 0 0 2 0 0 11 1 1416.7514 P0DMV9;P0DMV8 P0DMV9 237 247 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 0.0009115 125.72 By MS/MS 5.75 0.829 2 1 1 4 10744000 10744000 0 9454 550 9768 23409;23410;23411;23412 18785;18786;18787 18785 2 106490 0 LVNHFVEEFKRK TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK DNRLVNHFVEEFKRKHKKDISQNKRAVRRL R L V R K H 0 1 1 0 0 0 2 0 1 0 1 2 0 2 0 0 0 0 0 2 0 0 12 2 1544.8463 P0DMV9;P0DMV8 P0DMV9 237 248 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.037872 72.29 By MS/MS 5.5 0.5 1 1 2 1859300 1859300 0 9455 550 9769 23413;23414 18788 18788 1 14443 0 LVNLADCLCNEDLESR ALVTPWLKGDILGEKLVNLADCLCNEDLES VNLADCLCNEDLESRVSSESHFSERWTLLS K L V S R V 1 1 2 2 2 0 2 0 0 0 4 0 0 0 0 1 0 0 0 1 0 0 16 0 1919.8717 O94822 O94822 745 760 LTN1 E3 ubiquitin-protein ligase listerin yes yes 2 0.00043867 164.93 By MS/MS 2 0 1 1 167650 167650 0 9456 368 9770 23415 18789 18789 1 56705 0 LVNLQHLDLLNNK LSKNKLQQLPADFGRLVNLQHLDLLNNKLV GRLVNLQHLDLLNNKLVTLPVSFAQLKNLK R L V N K L 0 0 3 1 0 1 0 0 1 0 5 1 0 0 0 0 0 0 0 1 0 0 13 0 1532.8675 Q96AG4 Q96AG4 84 96 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 4.728E-05 179.19 By MS/MS 7 0 1 1 1098600 1098600 0 9457 2107 9771 23416 18790 18790 1 17246 0 LVNTINPGAR NNLRESLMQFSKPRKLVNTINPGARFMTTA SKPRKLVNTINPGARFMTTAMYDAREAIIP K L V A R F 1 1 2 0 0 0 0 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 1053.5931 Q92900 Q92900 930 939 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0081116 98.582 By MS/MS 3 0 1 1 288420 288420 0 9458 2077 9772 23417 18791 18791 1 5277.2 0 LVNTSENLSK ELGEQRDQLERTKSRLVNTSENLSKSRKIL RTKSRLVNTSENLSKSRKILRSMSRKVTTN R L V S K S 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 2 1 0 0 1 0 0 10 0 1103.5823 Q9UEU0 Q9UEU0 181 190 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes yes 2 1.39E-06 180.09 By MS/MS 8 0 1 1 1253900 1253900 0 9459 2713 9773 23418 18792 18792 1 15830 0 LVPGGGATEIELAK DDGVNTFKVLTRDKRLVPGGGATEIELAKQ RLVPGGGATEIELAKQITSYGETCPGLEQY R L V A K Q 2 0 0 0 0 0 2 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1353.7504 P50990 P50990 408 421 CCT8 T-complex protein 1 subunit theta yes yes 2 0.027925 84.479 By MS/MS By MS/MS 5.17 2.91 2 1 1 1 1 2 1 1 1 1 10 2 195780000 195120000 661280 9460 984 9774 23419;23420;23421;23422;23423;23424;23425;23426;23427;23428;23429;23430 18793;18794;18795 18795 3 1999500 676490 LVPLKETIK QPFQVAEVFTGHMGKLVPLKETIKGFQQIL TGHMGKLVPLKETIKGFQQILAGEYDHLPE K L V I K G 0 0 0 0 0 0 1 0 0 1 2 2 0 0 1 0 1 0 0 1 0 0 9 1 1039.6641 P06576 P06576 481 489 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.031306 101.25 By MS/MS 6.5 0.5 1 1 2 37102000 37102000 0 9461 497 9775 23431;23432 18796 18796 1 263020 0 LVPLLDRPFDETTYEETED DEVGDLLQLKYSRHRLVPLLDRPFDETTYE LDRPFDETTYEETED_______________ R L V E D - 0 1 0 3 0 0 4 0 0 0 3 0 0 1 2 0 3 0 1 1 0 0 19 1 2281.0638 O15270 O15270 544 562 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 7.4633E-07 204.18 By MS/MS 6 0 1 1 4605300 4605300 0 9462 178 9776 23433 18797;18798 18797 2 31658 0 LVPLLDTGDIIIDGGNSEYR LLVKAGQAVDDFIEKLVPLLDTGDIIIDGG DTGDIIIDGGNSEYRDTTRRCRDLKAKGIL K L V Y R D 0 1 1 3 0 0 1 3 0 3 3 0 0 0 1 1 1 0 1 1 0 0 20 0 2159.111 P52209 P52209 88 107 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 3.3909E-08 203.53 By MS/MS 6 0 1 1 958430 958430 0 9463 1011 9777 23434 18799 18799 1 6588.5 0 LVPLNQESVEER SGHIDRAFDIIERLKLVPLNQESVEERVAA RLKLVPLNQESVEERVAAFRNFSDEIRHNL K L V E R V 0 1 1 0 0 1 3 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 12 0 1411.7307 Q8N1F7 Q8N1F7 719 730 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.014178 88.338 By MS/MS 4 0 1 1 1661500 1661500 0 9464 1903 9778 23435 18800 18800 1 156360 0 LVQAFQFTDK VNDLPVGRSVDETLRLVQAFQFTDKHGEVC DETLRLVQAFQFTDKHGEVCPAGWKPGSDT R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 10 0 1195.6237 Q06830 Q06830 159 168 PRDX1 Peroxiredoxin-1 yes yes 2 1.4429E-07 187.5 By MS/MS By MS/MS 6 3 1 1 1 1 4180700 4021500 159200 9465 1297 9779 23436;23437 18801;18802 18802 2 79143 20264 LVQAFQYTDK LNDLPVGRSVDETLRLVQAFQYTDKHGEVC DETLRLVQAFQYTDKHGEVCPAGWKPGSET R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 10 0 1211.6186 Q13162 Q13162 231 240 PRDX4 Peroxiredoxin-4 yes yes 2 0.010549 93.096 By MS/MS 8.5 0.5 1 1 2 3042700 3042700 0 9466 1361 9780 23438;23439 18803 18803 1 49843 0 LVQASEELLR VRRFERKGFKLVALKLVQASEELLREHYAE LVALKLVQASEELLREHYAELRERPFYGRL K L V L R E 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1156.6452 Q13232 Q13232 57 66 NME3 Nucleoside diphosphate kinase 3 yes yes 2 0.0011042 121.6 By MS/MS 9 0.816 1 1 1 3 1264800 1264800 0 9467 1366 9781 23440;23441;23442 18804 18804 1 31636 0 LVQDVANNTNEEAGDGTTTATVLAR KSIDLKDKYKNIGAKLVQDVANNTNEEAGD EEAGDGTTTATVLARSIAKEGFEKISKGAN K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 8.7291E-30 276.4 By MS/MS By MS/MS 6.89 1.66 2 3 1 1 1 1 7 2 260820000 260300000 526670 9468 569 9782 23443;23444;23445;23446;23447;23448;23449;23450;23451 18805;18806;18807;18808;18809;18810;18811;18812;18813;18814;18815 18811 11 1883300 526950 LVQEQGSHSK ECWFPKATDKTFVEKLVQEQGSHSKFQKPR TFVEKLVQEQGSHSKFQKPRQLKDKADFCI K L V S K F 0 0 0 0 0 2 1 1 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1111.5622 P35580 P35580 553 562 MYH10 Myosin-10 yes yes 2 0.00067629 129.88 By MS/MS By MS/MS 2 0 2 1 1 628050 600260 27792 9469 825 9783 23452;23453 18816;18817 18817 2 203030 39303 LVQLLGGVAEK VGGKRLREELLKQTKLVQLLGGVAEKVRQA KQTKLVQLLGGVAEKVRQASGSARQVVLQR K L V E K V 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1125.6758 O00443 O00443 1052 1062 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 2 0.005702 102.06 By MS/MS 2.5 0.5 1 1 2 145380 145380 0 9470 107 9784 23454;23455 18818;18819 18819 2 2660 0 LVQLLVK PANHAPLQEAAVIPRLVQLLVKAHQDAQRH QEAAVIPRLVQLLVKAHQDAQRHVAAGTQQ R L V V K A 0 0 0 0 0 1 0 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 7 0 811.55312 P14923 P14923 527 533 JUP Junction plakoglobin yes yes 2 0.016816 117.7 By MS/MS By matching 8.25 2.49 1 1 2 2 2 1322800 989590 333160 9471 621 9785 23456;23457;23458;23459 18820;18821 18820 2 90975 460050 LVQLLVR PANHAPLREQGAIPRLVQLLVRAHQDTQRR REQGAIPRLVQLLVRAHQDTQRRTSMGGTQ R L V V R A 0 1 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 7 0 839.55927 P35222 P35222 536 542 CTNNB1 Catenin beta-1 yes yes 2 0.036184 100.07 By MS/MS 4 0 1 1 565190 565190 0 9472 813 9786 23460 18822 18822 1 53188 0 LVQSPNSYFMDVK HPSPEEEKRKHKKKRLVQSPNSYFMDVKCP KRLVQSPNSYFMDVKCPGCYKITTVFSHAQ R L V V K C 0 0 1 1 0 1 0 0 0 0 1 1 1 1 1 2 0 0 1 2 0 0 13 0 1526.7439 P42677;Q71UM5 P42677 24 36 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 2 2.581E-05 184.44 By MS/MS By matching 10 0 3 2 1 4021000 3978600 42414 9473 882;1752 9787;9788 23461;23462;23463 18823;18824 18823 465 2 214430 54302 LVQTPLTDR AKFNYGFEYLGVQDKLVQTPLTDRCYLTMT LGVQDKLVQTPLTDRCYLTMTQALEARLGG K L V D R C 0 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 9 0 1041.5819 Q14204 Q14204 1879 1887 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.045029 78.098 By MS/MS 1.5 0.5 1 1 2 2063400 2063400 0 9474 1433 9789 23464;23465 18825 18825 1 589700 0 LVRELEKK VPVPQLKSFQKIQVRLVRELEKKFSGKHVV FQKIQVRLVRELEKKFSGKHVVFIAQRRIL R L V K K F 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 8 2 1013.6233 P62081 P62081 79 86 RPS7 40S ribosomal protein S7 yes yes 3 0.017923 98.523 By MS/MS 9 0 1 1 1020700 1020700 0 9475 1138 9790 23466 18826 18826 1 20088 0 LVRGDAHECFVSPVAK PEKDVDGVTDINLGKLVRGDAHECFVSPVA VRGDAHECFVSPVAKAVIELLEKSGVNLDG K L V A K A 2 1 0 1 1 0 1 1 1 0 1 1 0 1 1 1 0 0 0 3 0 0 16 1 1783.9039 Q6UB35 Q6UB35 190 205 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.0019141 107.98 By MS/MS 4 0 1 1 1045600 1045600 0 9476 1728 9791 23467 18827 18827 1 98402 0 LVRPPVQVYGIEGR QVRCFSTSVVRPFAKLVRPPVQVYGIEGRY KLVRPPVQVYGIEGRYATALYSAASKQNKL K L V G R Y 0 2 0 0 0 1 1 2 0 1 1 0 0 0 2 0 0 0 1 3 0 0 14 1 1581.8991 P48047 P48047 27 40 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 1.4525E-05 196.27 By MS/MS By MS/MS 9 0.756 2 3 2 6 1 52111000 52037000 73877 9477 932 9792 23468;23469;23470;23471;23472;23473;23474 18828;18829;18830;18831;18832;18833;18834;18835;18836 18831 9 962590 168460 LVSGGGACSDTGACTPAR YNKSLAFQKLGMESRLVSGGGACSDTGACT GGGACSDTGACTPARSFLAQQRHITNTRRN R L V A R S 3 1 0 1 2 0 0 4 0 0 1 0 0 0 1 2 2 0 0 1 0 0 18 0 1735.7618 Q9UJC3 Q9UJC3 685 702 HOOK1 Protein Hook homolog 1 yes yes 2 8.2541E-17 252.14 By MS/MS 4 0 1 1 1192100 1192100 0 9478 2745 9793 23475 18837 18837 1 112190 0 LVSIGAEEIVDGNAK NVNKALDFIASKGVKLVSIGAEEIVDGNAK LVSIGAEEIVDGNAKMTLGMIWTIILRFAI K L V A K M 2 0 1 1 0 0 2 2 0 2 1 1 0 0 0 1 0 0 0 2 0 0 15 0 1513.7988 O43707 O43707 126 140 ACTN4 Alpha-actinin-4 yes yes 2 0.0044853 104.94 By MS/MS 4.33 0.471 2 1 3 1478000 1478000 0 9479 229 9794 23476;23477;23478 18838;18839 18838 1 120280 0 LVSIPDEIFCEEIAK AQYDPAKPNYISLDKLVSIPDEIFCEEIAK LVSIPDEIFCEEIAKASVQDFEKFLKTL__ K L V A K A 1 0 0 1 1 0 3 0 0 3 1 1 0 1 1 1 0 0 0 1 0 0 15 0 1761.8859 Q96E29 Q96E29 390 404 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.0040079 116.03 By MS/MS 7 0 1 1 198160 198160 0 9480 2141 9795 23479 18840 18840 1 3110.7 0 LVSIVADQLEK QIVCDWTDYDERMKKLVSIVADQLEKNRLP RMKKLVSIVADQLEKNRLPSVHPHHSMLYP K L V E K N 1 0 0 1 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1213.6918 O15294 O15294 489 499 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 1.6518E-05 167.12 By MS/MS 4 0 1 1 1302800 1302800 0 9481 179 9796 23480 18841 18841 1 122600 0 LVSLIGSK LDSRFVFDRPLPVSRLVSLIGSKTQIPTQR RPLPVSRLVSLIGSKTQIPTQRYGRRPYGV R L V S K T 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 8 0 815.51165 P25786 P25786 108 115 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.0076078 113.41 By MS/MS 8 0 1 1 9494600 9494600 0 9482 724 9797 23481 18842 18842 1 119870 0 LVSLYFDTK KSEKRTFLRQALEARLVSLYFDTKRYQEAL QALEARLVSLYFDTKRYQEALHLGSQLLRE R L V T K R 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 1 1 0 1 1 0 0 9 0 1084.5805 O00231 O00231 133 141 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.00039875 149.82 By MS/MS 7 0 1 1 913810 913810 0 9483 93 9798 23482 18843 18843 1 14345 0 LVSNESQR DLEKLPEFNRLHLQRLVSNESQRRQLVGKL NRLHLQRLVSNESQRRQLVGKLQVLVEEAF R L V Q R R 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 8 0 931.47231 Q5JPH6 Q5JPH6 362 369 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.010305 110.41 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 3653400 3644800 8615 9484 1605 9799 23483;23484;23485;23486;23487 18844 18844 1 32569 8827.9 LVSPGSANETSSILVESVTR HIVGSPFKAKVTGQRLVSPGSANETSSILV SANETSSILVESVTRSSTETCYSAIPKASS R L V T R S 1 1 1 0 0 0 2 1 0 1 2 0 0 0 1 5 2 0 0 3 0 0 20 0 2045.0641 O75369 O75369 2476 2495 FLNB Filamin-B yes yes 2 3.1987E-05 122.75 By MS/MS 1 0 1 1 64952 64952 0 9485 315 9800 23488 18845 18845 1 15651 0 LVSSDPEINTKK TVHLEKINKMEWWSRLVSSDPEINTKKINP WSRLVSSDPEINTKKINPENSKLSDLDSET R L V K K I 0 0 1 1 0 0 1 0 0 1 1 2 0 0 1 2 1 0 0 1 0 0 12 1 1329.714 Q9Y266 Q9Y266 257 268 NUDC Nuclear migration protein nudC yes yes 2 0.0053089 114.89 By MS/MS 7 0 1 1 382730 382730 0 9486 2816 9801 23489 18846 18846 1 6008.2 0 LVSYYYFLR KKPIYINVIRDPIERLVSYYYFLRFGDDYR RDPIERLVSYYYFLRFGDDYRPGLRRRKQG R L V L R F 0 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 3 1 0 0 9 0 1222.6386 Q7LGA3 Q7LGA3 170 178 HS2ST1 Heparan sulfate 2-O-sulfotransferase 1 yes yes 2 0.0080709 103.83 By MS/MS 7 0 1 1 152070 152070 0 9487 1774 9802 23490 18847 18847 1 2387.2 0 LVTCLESLR QEFIHELKMGSADERLVTCLESLRVSLTSN GSADERLVTCLESLRVSLTSNPVSWVESFG R L V L R V 0 1 0 0 1 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1089.5852 Q9NSV4 Q9NSV4 192 200 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.0213 88.37 By MS/MS 3 0 1 1 441420 441420 0 9488 2573 9803 23491 18848 18848 1 8076.7 0 LVTDQNISENWR GNICRSPIAEAVFRKLVTDQNISENWRVDS FRKLVTDQNISENWRVDSAATSGYEIGNPP K L V W R V 0 1 2 1 0 1 1 0 0 1 1 0 0 0 0 1 1 1 0 1 0 0 12 0 1473.7212 P24666 P24666 30 41 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 3.436E-09 222.18 By MS/MS 10 0 1 1 1209800 1209800 0 9489 715 9804 23492 18849 18849 1 65202 0 LVTEMGTYATQSALSSSR ELKPEEEITVGPVQKLVTEMGTYATQSALS EMGTYATQSALSSSRPTKKEEDRPPLRGFL K L V S R P 2 1 0 0 0 1 1 1 0 0 2 0 1 0 0 4 3 0 1 1 0 0 18 0 1900.92 P53618 P53618 514 531 COPB1 Coatomer subunit beta yes yes 2 2.6252E-07 256.13 By MS/MS 4.5 0.5 1 1 2 1337000 1337000 0 9490 1033 9805 23493;23494 18850 18850 1 85975 0 LVTEMGTYATQSALSSSRPTK ELKPEEEITVGPVQKLVTEMGTYATQSALS TYATQSALSSSRPTKKEEDRPPLRGFLLDG K L V T K K 2 1 0 0 0 1 1 1 0 0 2 1 1 0 1 4 4 0 1 1 0 0 21 1 2227.1154 P53618 P53618 514 534 COPB1 Coatomer subunit beta yes yes 3 0.00039894 104.76 By MS/MS 4.5 0.5 1 1 2 3933300 3933300 0 9491 1033 9806 23495;23496 18851 18851 570 1 302460 0 LVTEPLVLK TLEPCEGAETYVNGKLVTEPLVLKSGNRIV TYVNGKLVTEPLVLKSGNRIVMGKNHVFRF K L V L K S 0 0 0 0 0 0 1 0 0 0 3 1 0 0 1 0 1 0 0 2 0 0 9 0 1010.6376 O43896 O43896 574 582 KIF1C Kinesin-like protein KIF1C yes yes 2 0.024046 87.181 By MS/MS 3 0 1 1 703340 703340 0 9492 244 9807 23497 18852 18852 1 12869 0 LVTLPVSFAQLK GRLVNLQHLDLLNNKLVTLPVSFAQLKNLK NNKLVTLPVSFAQLKNLKWLDLKDNPLDPV K L V L K N 1 0 0 0 0 1 0 0 0 0 3 1 0 1 1 1 1 0 0 2 0 0 12 0 1314.7911 Q96AG4 Q96AG4 97 108 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.00015985 153.1 By MS/MS 7.5 0.5 1 1 2 1230700 1230700 0 9493 2107 9808 23498;23499 18853;18854 18853 2 19067 0 LVTPEDDELDELRPGQR SIKEVANVCNQSLMKLVTPEDDELDELRPG TPEDDELDELRPGQRQAEPTPDDALPKQEG K L V Q R Q 0 2 0 3 0 1 3 1 0 0 3 0 0 0 2 0 1 0 0 1 0 0 17 1 1980.9752 Q08AM6 Q08AM6 331 347 VAC14 Protein VAC14 homolog yes yes 2;3 0.0011705 137.4 By MS/MS 4.5 0.5 2 2 4 6870000 6870000 0 9494 1316 9809 23500;23501;23502;23503 18855;18856 18855 2 429240 0 LVVDSHVQYR GNAFHLCREVLRLTKLVVDSHVQYRLGNVD LRLTKLVVDSHVQYRLGNVDAFQLADGLQY K L V Y R L 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 10 0 1214.6408 Q6P2Q9 Q6P2Q9 556 565 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2;3 0.0011839 99.815 By MS/MS 2.5 0.5 2 2 4 1972700 1972700 0 9495 1708 9810 23504;23505;23506;23507 18857;18858 18858 2 561030 0 LVVPASQCGSLIGK MTNSTAASRPPVTLRLVVPASQCGSLIGKG RLVVPASQCGSLIGKGGCKIKEIRESTGAQ R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 2 0 0 0 2 0 0 14 0 1427.7806 P57721;Q15366 Q15366 102 115 PCBP3;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 2 0.0038955 107.09 By MS/MS By matching 7.33 0.471 2 1 2 1 32610000 32563000 47301 9496 1501;1080 9811 23508;23509;23510 18859;18860 18859 2 499710 85188 LVVPATQCGSLIGK MTNSTAASRPPVTLRLVVPATQCGSLIGKG RLVVPATQCGSLIGKGGCKIKEIRESTGAQ R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 1 1 0 0 2 0 0 14 0 1441.7963 Q15365 Q15365 102 115 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0049067 104.24 By MS/MS 8.5 1.12 1 1 1 1 4 28007000 28007000 0 9497 1500 9812 23511;23512;23513;23514 18861;18862 18861 2 436270 0 LVVQIDNAK ELQQKILCSKSENARLVVQIDNAKLAADDF KSENARLVVQIDNAKLAADDFRTKYQTEQS R L V A K L 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 9 0 998.57605 CON__Q14525;Q14525;CON__Q497I4;CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009 CON__Q14525 127 135 KRT33B;KRT31;KRT33A Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I no no 2 0.0063586 123.35 By MS/MS 10 0 1 1 0 0 0 + 9498 59;61 9813 23515 18863 18863 1 0 0 LVVSTQTALA AADDKEACFAVEGPKLVVSTQTALA_____ VEGPKLVVSTQTALA_______________ K L V L A - 2 0 0 0 0 1 0 0 0 0 2 0 0 0 0 1 2 0 0 2 0 0 10 0 1001.5757 CON__P02769 CON__P02769 598 607 yes yes 2 0.042943 75.738 By MS/MS 5.5 0.5 1 1 2 1512700 1512700 0 + 9499 43 9814 23516;23517 18864 18864 1 13127 0 LVVVELNNR RIVGVDGAIKALCNRLVVVELNNRTSRDLA KALCNRLVVVELNNRTSRDLAEQCVKVLEL R L V N R T 0 1 2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 3 0 0 9 0 1054.6135 Q9ULT8 Q9ULT8 106 114 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0047215 109.71 By MS/MS 2.5 1.12 1 1 1 1 4 1469300 1469300 0 9500 2774 9815 23518;23519;23520;23521 18865;18866;18867 18865 3 311230 0 LVYLVENPGGYVAYSK DSAQNSVIIVDKNGRLVYLVENPGGYVAYS VYLVENPGGYVAYSKAATVTGKLVHANFGT R L V S K A 1 0 1 0 0 0 1 2 0 0 2 1 0 0 1 1 0 0 3 3 0 0 16 0 1770.9192 P02786 P02786 209 224 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.00055294 155.08 By MS/MS 4 0 1 1 1000600 1000600 0 9501 458 9816 23522 18868 18868 1 94163 0 LWDCETGK DTKHVLTGSADNSCRLWDCETGKQLALLKT SADNSCRLWDCETGKQLALLKTNSAVRTCG R L W G K Q 0 0 0 1 1 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 8 0 1007.4382 Q13347 Q13347 78 85 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.023054 96.253 By MS/MS 7.5 0.5 1 1 2 7147900 7147900 0 9502 1372 9817 23523;23524 18869 18869 1 109300 0 LWDCETGKQLALLK DTKHVLTGSADNSCRLWDCETGKQLALLKT RLWDCETGKQLALLKTNSAVRTCGFDFGGN R L W L K T 1 0 0 1 1 1 1 1 0 0 4 2 0 0 0 0 1 1 0 0 0 0 14 1 1673.8811 Q13347 Q13347 78 91 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 1.1043E-06 175.74 By MS/MS 7.33 0.471 2 1 3 5570900 5570900 0 9503 1372 9818 23525;23526;23527 18870;18871;18872 18871 3 85221 0 LWDFIENR QLSSQGTVRFFNSVRLWDFIENRESRHVPN RFFNSVRLWDFIENRESRHVPNNEDVDMTE R L W N R E 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 8 0 1091.54 Q9H000 Q9H000 378 385 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 2 0.018129 101.72 By MS/MS 6 0.816 1 1 1 3 1627500 1627500 0 9504 2400 9819 23528;23529;23530 18873 18873 1 15123 0 LWDLTTGTTTR DGQFALSGSWDGTLRLWDLTTGTTTRRFVG GTLRLWDLTTGTTTRRFVGHTKDVLSVAFS R L W T R R 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 5 1 0 0 0 0 11 0 1263.6459 P63244 P63244 89 99 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 3.6792E-06 179.1 By MS/MS 8.4 1.02 1 2 1 1 5 25877000 25877000 0 9505 1202 9820 23531;23532;23533;23534;23535 18874;18875;18876;18877;18878 18874 5 343480 0 LWDLTTGTTTRR DGQFALSGSWDGTLRLWDLTTGTTTRRFVG TLRLWDLTTGTTTRRFVGHTKDVLSVAFSS R L W R R F 0 2 0 1 0 0 0 1 0 0 2 0 0 0 0 0 5 1 0 0 0 0 12 1 1419.747 P63244 P63244 89 100 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2;3 0.0052572 98.033 By MS/MS 8 0 2 2 10927000 10927000 0 9506 1202 9821 23536;23537 18879;18880 18880 2 137960 0 LWISYFDGDPK AWELLTQVYGIPEERLWISYFDGDPKAGLD PEERLWISYFDGDPKAGLDPDLETRDIWLS R L W P K A 0 0 0 2 0 0 0 1 0 1 1 1 0 1 1 1 0 1 1 0 0 0 11 0 1339.6449 Q5JTZ9 Q5JTZ9 167 177 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 1.735E-05 166.34 By MS/MS 4.5 0.5 1 1 2 320110 320110 0 9507 1613 9822 23538;23539 18881 18881 1 24969 0 LWNTLGVCK DNRQIVSGSRDKTIKLWNTLGVCKYTVQDE RDKTIKLWNTLGVCKYTVQDESHSEWVSCV K L W C K Y 0 0 1 0 1 0 0 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 9 0 1089.5641 P63244 P63244 131 139 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.00029238 153.08 By MS/MS 8.5 1.12 1 1 1 1 4 18199000 18199000 0 9508 1202 9823 23540;23541;23542;23543 18882 18882 1 238860 0 LWQNALLEK TSFGARDRCFLLIFRLWQNALLEKTLSPRE FLLIFRLWQNALLEKTLSPRELWHLVHQCY R L W E K T 1 0 1 0 0 1 1 0 0 0 3 1 0 0 0 0 0 1 0 0 0 0 9 0 1113.6182 Q96CP6;Q3KR37 Q96CP6 194 202 GRAMD1A;GRAMD1B GRAM domain-containing protein 1A;GRAM domain-containing protein 1B yes no 2 0.0025362 114.5 By MS/MS 4 0 1 1 497070 497070 0 9509 2123 9824 23544 18883 18883 1 46777 0 LWQTVVGK DGELYASGSEDGTLRLWQTVVGKTYGLWKC SEDGTLRLWQTVVGKTYGLWKCVLPEEDSG R L W G K T 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 8 0 929.53345 Q9Y3F4 Q9Y3F4 291 298 STRAP Serine-threonine kinase receptor-associated protein yes yes 1;2 0.0043767 126.52 By MS/MS 7 0 2 2 2195300 2195300 0 9510 2877 9825 23545;23546 18884;18885 18884 1 34463 0 LWTGGLDNTVR TDGASCIDISDYGTRLWTGGLDNTVRCWDL YGTRLWTGGLDNTVRCWDLREGRQLQQHDF R L W V R C 0 1 1 1 0 0 0 2 0 0 2 0 0 0 0 0 2 1 0 1 0 0 11 0 1230.6357 Q04725;Q04724;Q04726;Q04727 Q04725 604 614 TLE2;TLE1;TLE3;TLE4 Transducin-like enhancer protein 2;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 yes no 2 0.0065626 99.788 By MS/MS 4.5 0.5 1 1 2 1045400 1045400 0 9511 1292 9826 23547;23548 18886 18886 1 73049 0 LWTLTTR VKTDALPGVLRWQQRLWTLTTRFIEARASG GVLRWQQRLWTLTTRFIEARASGKSPQPQL R L W T R F 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 3 1 0 0 0 0 7 0 889.50215 Q15031 Q15031 695 701 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.042447 95.352 By MS/MS 4.5 0.5 1 1 2 1060600 1060600 0 9512 1477 9827 23549;23550 18887 18887 1 79948 0 LWTLVSEQTR LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK VNLDKLWTLVSEQTRVNAAKNKTGAAPIID K L W T R V 0 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 10 0 1231.6561 P46776 P46776 78 87 RPL27A 60S ribosomal protein L27a yes yes 2 4.0553E-05 183.43 By MS/MS 9.5 0.5 1 1 2 576600 576600 0 9513 914 9828 23551;23552 18888;18889 18888 2 19543 0 LYAQYFQGDLK AVPLAGFGYGLPISRLYAQYFQGDLKLYSL PISRLYAQYFQGDLKLYSLEGYGTDAVIYI R L Y L K L 1 0 0 1 0 2 0 1 0 0 2 1 0 1 0 0 0 0 2 0 0 0 11 0 1344.6714 Q15118 Q15118 364 374 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 6.3598E-06 176.6 By MS/MS 7 0 1 1 852320 852320 0 9514 1489 9829 23553 18890 18890 1 13380 0 LYASLGANDEDIR HDLKHAHELRQAAFKLYASLGANDEDIRKK FKLYASLGANDEDIRKKIIETENMMDRIVT K L Y I R K 2 1 1 2 0 0 1 1 0 1 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1435.6943 Q8IUR7 Q8IUR7 364 376 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.00015897 182.92 By MS/MS 5 0 1 1 1503300 1503300 0 9515 1860 9830 23554 18891;18892 18891 2 15077 0 LYAVHQEGNK LAENSGVKANEVISKLYAVHQEGNKNVGLD EVISKLYAVHQEGNKNVGLDIEAEVPAVKD K L Y N K N 1 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1157.5829 P50990 P50990 467 476 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0067503 101.65 By MS/MS By matching 6 0 2 1 1 25559000 25474000 84087 9516 984 9831 23555;23556 18893 18893 1 175120 86165 LYCEKENDPK TRELSNFYFSIIKDRLYCEKENDPKRRSCQ IIKDRLYCEKENDPKRRSCQTALVEILDVI R L Y P K R 0 0 1 1 1 0 2 0 0 0 1 2 0 0 1 0 0 0 1 0 0 0 10 1 1294.5864 Q9NSE4 Q9NSE4 806 815 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0030252 131.12 By MS/MS 4 0 1 1 573140 573140 0 9517 2570 9832 23557 18894 18894 1 53937 0 LYCNVDSNK RLLNLGRHSLDHLLKLYCNVDSNKQYQLAD LDHLLKLYCNVDSNKQYQLADWRIRPLPEE K L Y N K Q 0 0 2 1 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 9 0 1111.4968 Q01780 Q01780 409 417 EXOSC10 Exosome component 10 yes yes 2 0.040253 80.165 By MS/MS 4 0 1 1 274370 274370 0 9518 1269 9833 23558 18895 18895 1 25820 0 LYCPVEFSK NLTEALSLYEEQLGRLYCPVEFSKEIVCVP EEQLGRLYCPVEFSKEIVCVPSYLELWVFY R L Y S K E 0 0 0 0 1 0 1 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 9 0 1141.5478 P52788 P52788 335 343 SMS Spermine synthase yes yes 2 0.034969 82.452 By MS/MS 7 0 1 1 1157600 1157600 0 9519 1022 9834 23559 18896 18896 1 18172 0 LYDGLFK IIGIIDPECRMIGLRLYDGLFKVIPLDRDN ECRMIGLRLYDGLFKVIPLDRDNKELKAFN R L Y F K V 0 0 0 1 0 0 0 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 7 0 854.4538 Q16531 Q16531 135 141 DDB1 DNA damage-binding protein 1 yes yes 2 0.021288 111.28 By MS/MS 2.5 1.12 1 1 1 1 4 1431900 1431900 0 9520 1549 9835 23560;23561;23562;23563 18897;18898 18898 2 211520 0 LYDIDVAK DVKANKHQIKQAVKKLYDIDVAKVNTLIRP IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV K L Y A K V 1 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 8 0 935.4964 P62750 P62750 116 123 RPL23A 60S ribosomal protein L23a yes yes 2 0.006339 119.29 By MS/MS By matching 9 0 2 1 1 6920400 6862400 57983 9521 1168 9836 23564;23565 18899 18899 1 135050 132220 LYDILGVPPGASENELK ______________________________ DILGVPPGASENELKKAYRKLAKEYHPDKN K L Y L K K 1 0 1 1 0 0 2 2 0 1 3 1 0 0 2 1 0 0 1 1 0 0 17 0 1813.9462 O60884 O60884 9 25 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.034559 86.262 By MS/MS 7 0 1 1 339670 339670 0 9522 285 9837 23566 18900 18900 1 5332.2 0 LYDILGVPPGASENELKK ______________________________ ILGVPPGASENELKKAYRKLAKEYHPDKNP K L Y K K A 1 0 1 1 0 0 2 2 0 1 3 2 0 0 2 1 0 0 1 1 0 0 18 1 1942.0411 O60884 O60884 9 26 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 3 0.0018424 103.88 By MS/MS 6.5 0.5 1 1 2 3503100 3503100 0 9523 285 9838 23567;23568 18901;18902;18903;18904 18902 4 46389 0 LYDLPDEPFTR KEYVTVKIRKKWNSKLYDLPDEPFTRQFYF WNSKLYDLPDEPFTRQFYFVHSAGQFKGKT K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.039801 75.294 By MS/MS 4 0 1 1 296500 296500 0 9524 2205 9839 23569 18905 18905 1 27903 0 LYDNLLEQNLIR AELRDDPIISTHLAKLYDNLLEQNLIRVIE LAKLYDNLLEQNLIRVIEPFSRVQIEHISS K L Y I R V 0 1 2 1 0 1 1 0 0 1 4 0 0 0 0 0 0 0 1 0 0 0 12 0 1502.8093 O00231 O00231 326 337 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 9.5432E-25 271.62 By MS/MS 6.5 0.5 1 1 2 6629400 6629400 0 9525 93 9840 23570;23571 18906;18907 18907 2 80608 0 LYDRDVASAAPEKAENPAGHGSK IFGYRGVVLFPWQARLYDRDVASAAPEKAE AAPEKAENPAGHGSKEVKGKTHTYYQVLID R L Y S K E 5 1 1 2 0 0 2 2 1 0 1 2 0 0 2 2 0 0 1 1 0 0 23 2 2382.1564 Q9Y2S7 Q9Y2S7 102 124 POLDIP2 Polymerase delta-interacting protein 2 yes yes 4 0.0027765 74.657 By MS/MS 7 0 1 1 890600 890600 0 9526 2842 9841 23572 18908;18909 18909 2 13981 0 LYDVVAVFPK PSHCNVLRATSSRARLYDVVAVFPKTEKLF SSRARLYDVVAVFPKTEKLFHIACTHLDVD R L Y P K T 1 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 1 3 0 0 10 0 1149.6434 P78346 P78346 99 108 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.0081116 98.582 By MS/MS 8 0 1 1 239280 239280 0 9527 1220 9842 23573 18910 18910 1 3020.9 0 LYEAGLAYQK CLPDYYKWTQYLFIKLYEAGLAYQKEALVN YLFIKLYEAGLAYQKEALVNWDPVDQTVLA K L Y Q K E 2 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1154.5972 Q15031 Q15031 192 201 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 6.7192E-06 176.6 By MS/MS 4 0 1 1 3180300 3180300 0 9528 1477 9843 23574 18911 18911 1 299280 0 LYEEGSNKR KDGVVFGVEKLVLSKLYEEGSNKRLFNVDR KLVLSKLYEEGSNKRLFNVDRHVGMAVAGL K L Y K R L 0 1 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 9 1 1094.5356 P25788 P25788 58 66 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.0060962 124.08 By MS/MS 8 0 1 1 3794200 3794200 0 9529 726 9844 23575 18912 18912 1 47901 0 LYEIGAGTSEVR YINDFPMGRFLRDAKLYEIGAGTSEVRRLV DAKLYEIGAGTSEVRRLVIGRAFNADFH__ K L Y V R R 1 1 0 0 0 0 2 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 12 0 1293.6565 P26440 P26440 402 413 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.034638 91.469 By MS/MS 7 0 1 1 0 0 0 9530 732 9845 23576 18913 18913 1 0 0 LYELDGLR EDAFHFVSYVPVNGRLYELDGLREGPIDLG YVPVNGRLYELDGLREGPIDLGACNQDDWI R L Y L R E 0 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 8 0 977.5182 Q9Y5K5 Q9Y5K5 175 182 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 2 0.044512 84.568 By MS/MS 7 0 1 1 699720 699720 0 9531 2912 9846 23577 18914 18914 1 10984 0 LYENFISEFEHR FVQDPCFAQGDGLIKLYENFISEFEHRVNP LIKLYENFISEFEHRVNPLSLVEIILHVVR K L Y H R V 0 1 1 0 0 0 3 0 1 1 1 0 0 2 0 1 0 0 1 0 0 0 12 0 1582.7416 Q9UNM6 Q9UNM6 59 70 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 3 0.029156 98.902 By MS/MS 7 0 1 1 313950 313950 0 9532 2791 9847 23578 18915 18915 1 4928.4 0 LYEPDQLQELK RQELDAFLAQALSPKLYEPDQLQELKIENL LSPKLYEPDQLQELKIENLDPRGIQLSALF K L Y L K I 0 0 0 1 0 2 2 0 0 0 3 1 0 0 1 0 0 0 1 0 0 0 11 0 1374.7031 Q9NZB2 Q9NZB2 748 758 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 0.022174 84.507 By MS/MS 3.5 0.5 1 1 2 478320 478320 0 9533 2647 9848 23579;23580 18916 18916 1 18800 0 LYFCVDR AGGTGGKGKSGGRFRLYFCVDRGATKECKE GKSGGRFRLYFCVDRGATKECKEAKEVKDA R L Y D R G 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 971.45349 O14654 O14654 655 661 IRS4 Insulin receptor substrate 4 yes yes 2 0.027749 106.42 By MS/MS 4 0.816 1 1 1 3 1952800 1952800 0 9534 129 9849 23581;23582;23583 18917 18917 1 88435 0 LYFSAEEGGER LTVTFSIKMFLTVTRLYFSAEEGGERSVCL TVTRLYFSAEEGGERSVCLTFAFLFLLLAM R L Y E R S 1 1 0 0 0 0 3 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 11 0 1256.5673 Q9NX61 Q9NX61 157 167 TMEM161A Transmembrane protein 161A yes yes 2 0.00043379 132.88 By MS/MS 1.5 0.5 1 1 2 253030 253030 0 9535 2620 9850 23584;23585 18918 18918 1 68371 0 LYGFTENR VLVAEEEAARVALRKLYGFTENRRPWNYSK ARVALRKLYGFTENRRPWNYSKPKETLRAE K L Y N R R 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 8 0 998.48214 Q9H9J2 Q9H9J2 304 311 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.013109 107.29 By MS/MS 7.5 0.5 1 1 2 3182600 3182600 0 9536 2487 9851 23586;23587 18919 18919 1 42138 0 LYGIQAFCK ENLRQRSQKLVEEAKLYGIQAFCKDLLEVA LVEEAKLYGIQAFCKDLLEVADVLEKATQC K L Y C K D 1 0 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1098.5532 Q9HAV7 Q9HAV7 101 109 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.0019355 122.13 By MS/MS 9 0 1 1 505760 505760 0 9537 2496 9852 23588 18920 18920 1 9953.4 0 LYGLGTGVAQK LFFEDSIDDAKYCGRLYGLGTGVAQKQNED YCGRLYGLGTGVAQKQNEDVDSAQEKMSIL R L Y Q K Q 1 0 0 0 0 1 0 3 0 0 2 1 0 0 0 0 1 0 1 1 0 0 11 0 1105.6132 Q9UFF9 Q9UFF9 259 269 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 2 0.0053813 114.89 By MS/MS 8 0 1 1 0 0 0 9538 2714 9853 23589 18921 18921 1 0 0 LYGPSSVSFADDFVR SNSTARNVTWKLGSRLYGPSSVSFADDFVR LYGPSSVSFADDFVRSSKQHYNCEHSKINF R L Y V R S 1 1 0 2 0 0 0 1 0 0 1 0 0 2 1 3 0 0 1 2 0 0 15 0 1658.794 P50454 P50454 134 148 SERPINH1 Serpin H1 yes yes 2 8.6524E-05 184.87 By MS/MS 6.5 0.5 1 1 2 5867800 5867800 0 9539 975 9854 23590;23591 18922;18923;18924;18925 18923 4 45773 0 LYGSAGPPPTGEEDTAEKDEL KKKELEEIVQPIISKLYGSAGPPPTGEEDT PPPTGEEDTAEKDEL_______________ K L Y E L - 2 0 0 2 0 0 4 3 0 0 2 1 0 0 3 1 2 0 1 0 0 0 21 1 2174.9855 P11021 P11021 634 654 HSPA5 78 kDa glucose-regulated protein yes yes 2 2.6281E-18 263.15 By MS/MS By matching 5 0 2 1 1 15280000 15174000 105760 9540 571 9855 23592;23593 18926;18927 18926 2 152190 88816 LYHDIAQQAFK RQCLDLLRNNSRVERLYHDIAQQAFKFCLQ RVERLYHDIAQQAFKFCLQYTRKAEFRKLC R L Y F K F 2 0 0 1 0 2 0 0 1 1 1 1 0 1 0 0 0 0 1 0 0 0 11 0 1332.6826 Q14152 Q14152 173 183 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 2.4207E-05 160.36 By MS/MS 4.55 1.78 1 3 2 2 1 1 1 11 55913000 55913000 0 9541 1422 9856 23594;23595;23596;23597;23598;23599;23600;23601;23602;23603;23604 18928;18929;18930;18931;18932;18933 18928 6 1784400 0 LYHEATTDTYK TPVLLHFITKGYVIRLYHEATTDTYKAITY YVIRLYHEATTDTYKAITYNAMLAETSTVF R L Y Y K A 1 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 3 0 2 0 0 0 11 0 1340.6248 Q9BUB7 Q9BUB7 170 180 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2;3 2.2865E-05 179.81 By MS/MS 9.5 0.5 2 2 4 8128500 8128500 0 9542 2323 9857 23605;23606;23607;23608 18934;18935;18936;18937 18935 4 199550 0 LYHNEVEIEK KDEVVRAQVQLQLFKLYHNEVEIEKLNKEL LQLFKLYHNEVEIEKLNKELASKNKEIEKD K L Y E K L 0 0 1 0 0 0 3 0 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1272.635 Q14683 Q14683 228 237 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 0.00031403 139.38 By MS/MS 3 0 2 2 1426500 1426500 0 9543 1451 9858 23609;23610 18938;18939 18939 2 26102 0 LYIGNLNESVTPADLEK ______________________________ IGNLNESVTPADLEKVFAEHKISYSGQFLV K L Y E K V 1 0 2 1 0 0 2 1 0 1 3 1 0 0 1 1 1 0 1 1 0 0 17 0 1874.9626 Q9NZI8 Q9NZI8 4 20 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 3.4258E-24 278.64 By MS/MS 5 0 1 1 1754800 1754800 0 9544 2649 9859 23611 18940 18940 1 17599 0 LYKDDQLLDDGK RIVEGILKRPPDEQRLYKDDQLLDDGKTLG EQRLYKDDQLLDDGKTLGECGFTSQTARPQ R L Y G K T 0 0 0 4 0 1 0 1 0 0 3 2 0 0 0 0 0 0 1 0 0 0 12 1 1421.7038 Q15370 Q15370 44 55 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 2.1492E-06 202.05 By MS/MS 10 0 1 1 810550 810550 0 9545 1503 9860 23612 18941;18942 18942 2 43685 0 LYLEREEYGK KNDRLWFKTNTKLGKLYLEREEYGKLQKIL TKLGKLYLEREEYGKLQKILRQLHQSCQTD K L Y G K L 0 1 0 0 0 0 3 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 1 1298.6507 P61201 P61201 158 167 COPS2 COP9 signalosome complex subunit 2 yes yes 2 0.011488 111.61 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 11297000 11250000 47100 9546 1115 9861 23613;23614;23615;23616;23617 18943 18943 1 702730 100350 LYLINSPVVR DPVSIIQKYGADALRLYLINSPVVRAENLR ADALRLYLINSPVVRAENLRFKEEGVRDVL R L Y V R A 0 1 1 0 0 0 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 10 0 1172.6917 P41252 P41252 625 634 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 7.575E-08 195.05 By MS/MS 3 1.41 1 1 1 1 1 5 7113800 7113800 0 9547 871 9862 23618;23619;23620;23621;23622 18944;18945;18946;18947 18947 3 450750 0 LYLKAEQER VDKTVCKKNLGRLTRLYLKAEQERQHNYLK LGRLTRLYLKAEQERQHNYLKDGPYITAEE R L Y E R Q 1 1 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 9 1 1148.619 Q6P2Q9 Q6P2Q9 782 790 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.039372 104.01 By MS/MS 2 0.816 1 1 1 3 717390 717390 0 9548 1708 9863 23623;23624;23625 18948 18948 1 192670 0 LYLNETFSELR AGTLGTVAGSAAGLKLYLNETFSELRLDSV AGLKLYLNETFSELRLDSVVQWMEHFETWP K L Y L R L 0 1 1 0 0 0 2 0 0 0 3 0 0 1 0 1 1 0 1 0 0 0 11 0 1383.7034 P27708 P27708 1557 1567 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.3798E-05 169.65 By MS/MS 1.5 0.5 1 1 2 177400 177400 0 9549 745 9864 23626;23627 18949;18950 18950 2 52948 0 LYLVDLAGSEK VKQENTQTEQKLSGKLYLVDLAGSEKVSKT LSGKLYLVDLAGSEKVSKTGAEGAVLDEAK K L Y E K V 1 0 0 1 0 0 1 1 0 0 3 1 0 0 0 1 0 0 1 1 0 0 11 0 1206.6496 P33176;Q12840;O60282 P33176 227 237 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 2.0754E-05 163.16 By MS/MS 4.5 1.12 1 1 1 1 4 7004600 7004600 0 9550 800 9865 23628;23629;23630;23631 18951;18952 18952 2 617050 0 LYNLFLK FVGPLKSQAADQITKLYNLFLKIDATQVEV QAADQITKLYNLFLKIDATQVEVNPFGETP K L Y L K I 0 0 1 0 0 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 7 0 909.53239 Q96I99 Q96I99 228 234 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.012562 128.75 By MS/MS 7 0 1 1 515720 515720 0 9551 2172 9866 23632 18953 18953 1 8095.9 0 LYPAVDEQETPLPR ALNEQEKELQRRLKRLYPAVDEQETPLPRS RLYPAVDEQETPLPRSWSPKDKFSYIGLSQ R L Y P R S 1 1 0 1 0 1 2 0 0 0 2 0 0 0 3 0 1 0 1 1 0 0 14 0 1626.8253 Q96S59 Q96S59 154 167 RANBP9 Ran-binding protein 9 yes yes 2 4.1725E-05 190.36 By MS/MS 4 0.816 1 1 1 3 5569100 5569100 0 9552 2232 9867 23633;23634;23635 18954 18954 1 435030 0 LYPAVNQQETPLPR LPSPGEQELSRRLQRLYPAVNQQETPLPRS RLYPAVNQQETPLPRSWSPKDKYNYIGLSQ R L Y P R S 1 1 1 0 0 2 1 0 0 0 2 0 0 0 3 0 1 0 1 1 0 0 14 0 1624.8573 Q6VN20 Q6VN20 42 55 RANBP10 Ran-binding protein 10 yes yes 2 0.0011788 135.1 By MS/MS 5 0 1 1 2176800 2176800 0 9553 1734 9868 23636 18955 18955 1 21832 0 LYPEGLAQLAR LSKEDRAKLFPHCGRLYPEGLAQLARADDY HCGRLYPEGLAQLARADDYEQVKNVADYYP R L Y A R A 2 1 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 0 1 0 0 0 11 0 1229.6768 P61421 P61421 247 257 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 2 0.0005069 136.99 By MS/MS 7 0 1 1 3145000 3145000 0 9554 1123 9869 23637 18956 18956 1 49371 0 LYPPSAEYPDLR LLRPEPVRAASERRRLYPPSAEYPDLRKHN RRRLYPPSAEYPDLRKHNNCMASHLTPAVY R L Y L R K 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 1 0 0 2 0 0 0 12 0 1419.7034 P12532 P12532 46 57 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.016865 86.898 By MS/MS 7 0 1 1 3224700 3224700 0 9555 593 9870 23638 18957 18957 1 50622 0 LYPVLQQSLVR SWAEAVRLGLEGCQRLYPVLQQSLVRAARR GCQRLYPVLQQSLVRAARRRGAAAQP____ R L Y V R A 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 1 0 0 1 2 0 0 11 0 1314.766 Q5RKV6 Q5RKV6 251 261 EXOSC6 Exosome complex component MTR3 yes yes 2 0.010083 90.827 By MS/MS 8 0 1 1 499430 499430 0 9556 1617 9871 23639 18958 18958 1 6305.3 0 LYQAIQR NVSSKVRQLDLAKNRLYQAIQRADDILDLK QLDLAKNRLYQAIQRADDILDLKFCMDGVQ R L Y Q R A 1 1 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 890.4974 Q9H9E3 Q9H9E3 122 128 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.034662 101.21 By MS/MS 4 0 1 1 577610 577610 0 9557 2486 9872 23640 18959 18959 1 54357 0 LYQECEK KYKLDAKSKIRALLRLYQECEKLKKLMSSN SKIRALLRLYQECEKLKKLMSSNSTDLPLN R L Y E K L 0 0 0 0 1 1 2 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 968.42733 O95757;Q92598 Q92598 266 272 HSPA4L;HSPH1 Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa no no 2 0.018431 113.5 By MS/MS 4 0 1 1 747830 747830 0 9558 2059;424 9873 23641 18960 18960 1 70376 0 LYQEFGIR SGESKYTGTLDCAKKLYQEFGIRGIYKGTV TLDCAKKLYQEFGIRGIYKGTVLTLMRDVP K L Y I R G 0 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1024.5342 O43772 O43772 159 166 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0027177 136.27 By MS/MS 8 0 1 1 3416800 3416800 0 9559 234 9874 23642 18961 18961 1 43137 0 LYQFIEPFEEK YHLRQYTEAISVGEKLYQFIEPFEEKFAQA VGEKLYQFIEPFEEKFAQAVCFLLVDLYIL K L Y E K F 0 0 0 0 0 1 3 0 0 1 1 1 0 2 1 0 0 0 1 0 0 0 11 0 1441.7129 Q9H9A5 Q9H9A5 136 146 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 2 0.0077539 96.64 By MS/MS 5 0 1 1 301640 301640 0 9560 2483 9875 23643 18962 18962 1 3025.3 0 LYQGHLQEESGPPPESMPK NWKQPPERELSRLRRLYQGHLQEESGPPPE HLQEESGPPPESMPKMPPRTPAEASSTGQT R L Y P K M 0 0 0 0 0 2 3 2 1 0 2 1 1 0 4 2 0 0 1 0 0 0 19 0 2122.9994 Q9Y676 Q9Y676 219 237 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 0.0363 112.82 By MS/MS 8 0 1 1 601460 601460 0 9561 2932 9876 23644 18963;18964 18963 2 7593.4 0 LYQVEYAFK AGFDRHITIFSPEGRLYQVEYAFKAINQGG FSPEGRLYQVEYAFKAINQGGLTSVAVRGK R L Y F K A 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 2 1 0 0 9 0 1159.5914 P60900 P60900 22 30 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.0026052 113.62 By MS/MS 8.5 1.12 1 1 1 1 4 10080000 10080000 0 9562 1099 9877 23645;23646;23647;23648 18965 18965 1 138460 0 LYRKEVLEK ILLRPGASDLTGSFRLYRKEVLEKLIEKCV LTGSFRLYRKEVLEKLIEKCVSKGYVFQME R L Y E K L 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 9 2 1176.6867 O60762 O60762 189 197 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 3 0.011003 126.31 By MS/MS 8 0 1 1 4553300 4553300 0 9563 275 9878 23649 18966 18966 1 57485 0 LYRPGSVAYVSR IGNTGGMLDNILASKLYRPGSVAYVSRSGG ASKLYRPGSVAYVSRSGGMSNELNNIISRT K L Y S R S 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 2 2 0 0 12 1 1366.7357 P53396 P53396 651 662 ACLY ATP-citrate synthase yes yes 2 0.016672 108.31 By MS/MS 4.5 0.5 1 1 2 4884700 4884700 0 9564 1030 9879 23650;23651 18967 18967 1 440850 0 LYRPPPVLDALGR AAEVMGRLMEIYQEKLYRPPPVLDALGRVI EKLYRPPPVLDALGRVISESPPDQWEARCG K L Y G R V 1 2 0 1 0 0 0 1 0 0 3 0 0 0 3 0 0 0 1 1 0 0 13 1 1465.8405 Q92616 Q92616 1209 1221 GCN1L1 Translational activator GCN1 yes yes 3 0.031411 105.65 By MS/MS 2 0 1 1 252500 252500 0 9565 2064 9880 23652 18968 18968 1 85406 0 LYSEDELPAEFK IHANCRIRRVYFSDRLYSEDELPAEFKLYL SDRLYSEDELPAEFKLYLPVQNKAKQ____ R L Y F K L 1 0 0 1 0 0 3 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 12 0 1439.682 Q9Y6A4 Q9Y6A4 171 182 CFAP20 Cilia- and flagella-associated protein 20 yes yes 2 9.3995E-09 215.83 By MS/MS 9 0 1 1 723360 723360 0 9566 2936 9881 23653 18969 18969 1 14236 0 LYSILQGDSPTK LFENQTPAHVYYRWKLYSILQGDSPTKWRT RWKLYSILQGDSPTKWRTEDFRMFKNGSFW K L Y T K W 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 2 1 0 1 0 0 0 12 0 1320.6925 O15042 O15042 477 488 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2 0.00085961 144.7 By MS/MS 4 0.816 1 1 1 3 892470 892470 0 9567 156 9882 23654;23655;23656 18970 18970 1 33077 0 LYSLFLK FPPNIVESAAENMVKLYSLFLKYDATMIEI SAAENMVKLYSLFLKYDATMIEINPMVEDS K L Y L K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 1 0 1 0 0 1 0 0 0 7 0 882.52149 Q9P2R7 Q9P2R7 243 249 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.016816 117.7 By MS/MS 7 0 1 1 1412900 1412900 0 9568 2690 9883 23657 18971 18971 1 22180 0 LYSPSQIGAFVLMK VRASNGDAWVEAHGKLYSPSQIGAFVLMKM KLYSPSQIGAFVLMKMKETAENYLGHTAKN K L Y M K M 1 0 0 0 0 1 0 1 0 1 2 1 1 1 1 2 0 0 1 1 0 0 14 0 1552.8323 P38646 P38646 160 173 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.00040613 139.32 By MS/MS 4.5 0.5 1 1 2 263380 263380 0 9569 850 9884 23658;23659 18972 18972 435 1 6773.7 0 LYSVSYLLK RTPCEEILVKHVGSRLYSVSYLLKDKGEYT KHVGSRLYSVSYLLKDKGEYTLVVKWGDEH R L Y L K D 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 2 0 0 2 1 0 0 9 0 1084.6168 P21333 P21333 2613 2621 FLNA Filamin-A yes yes 2 0.035459 82.241 By MS/MS 2 0 1 1 150050 150050 0 9570 677 9885 23660 18973 18973 1 50753 0 LYSVVSQLIR GPGPPIKYQYAELGKLYSVVSQLIRCCNVS AELGKLYSVVSQLIRCCNVSSRMQSSINGN K L Y I R C 0 1 0 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 1 2 0 0 10 0 1176.6867 Q93008;O00507 Q93008 2228 2237 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 1.8131E-07 183.43 By MS/MS 2 0 1 1 236040 236040 0 9571 2085 9886 23661 18974 18974 1 79839 0 LYTEGYQVPPGATYTAIEAPK AEMKTSMESLIHHFKLYTEGYQVPPGATYT QVPPGATYTAIEAPKGEFGVYLVSDGSSRP K L Y P K G 3 0 0 0 0 1 2 2 0 1 1 1 0 0 3 0 3 0 3 1 0 0 21 0 2268.1314 O75306 O75306 384 404 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 4.7785E-06 151.11 By MS/MS 7 0 1 1 1002200 1002200 0 9572 308 9887 23662 18975 18975 1 15734 0 LYTLQDK RVTAIHIDPATHRQKLYTLQDKAQVADVVV DPATHRQKLYTLQDKAQVADVVVSRWLRVT K L Y D K A 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 7 0 879.47018 P49327 P49327 1066 1072 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.014876 122.74 By MS/MS By matching 2 0.707 1 2 1 3 1 8770700 8706300 64396 9573 946 9888 23663;23664;23665;23666 18976;18977;18978 18977 3 1942400 91068 LYTLQDKAQVADVVVSR RVTAIHIDPATHRQKLYTLQDKAQVADVVV TLQDKAQVADVVVSRWLRVTVAGGVHISGL K L Y S R W 2 1 0 2 0 2 0 0 0 0 2 1 0 0 0 1 1 0 1 4 0 0 17 1 1904.0367 P49327 P49327 1066 1082 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 4.3509E-05 193.31 By MS/MS 2 0 1 1 419660 419660 0 9574 946 9889 23667 18979 18979 1 141950 0 LYTPSGNIVPR GNLALRSLLGKDGEKLYTPSGNIVPRHLFR DGEKLYTPSGNIVPRHLFRIKHLPYTTRRD K L Y P R H 0 1 1 0 0 0 0 1 0 1 1 0 0 0 2 1 1 0 1 1 0 0 11 0 1215.6612 Q53S58 Q53S58 271 281 TMEM177 Transmembrane protein 177 yes yes 2 0.031775 79.489 By MS/MS 8 0 1 1 1925800 1925800 0 9575 1592 9890 23668 18980 18980 1 24313 0 LYTQGYISYPR SLGMGPQHAMQTAERLYTQGYISYPRTETT TAERLYTQGYISYPRTETTHYPENFDLKGS R L Y P R T 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 1 1 0 3 0 0 0 11 0 1359.6823 O95985;Q13472 O95985 328 338 TOP3B;TOP3A DNA topoisomerase 3-beta-1;DNA topoisomerase 3-alpha yes no 2 0.0069538 98.754 By MS/MS 4 0 1 1 443350 443350 0 9576 435 9891 23669 18981 18981 1 41722 0 LYTTMPVAK VQQQAQLSTIRSFLKLYTTMPVAKLAGFLD IRSFLKLYTTMPVAKLAGFLDLTEQEFRIQ K L Y A K L 1 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 2 0 1 1 0 0 9 0 1022.5471 Q9Y262 Q9Y262 466 474 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0018693 122.18 By MS/MS By matching 4.29 1.83 1 1 3 2 6 1 13518000 13462000 56281 9577 2814 9892;9893 23670;23671;23672;23673;23674;23675;23676 18982;18983;18984;18985 18984 1179 4 219100 47264 MAADVSVTHRPPLSPK ______________________________ AADVSVTHRPPLSPKSGAEVEAGDAAERRA - M A P K S 2 1 0 1 0 0 0 0 1 0 1 1 1 0 3 2 1 0 0 2 0 0 16 1 1704.8981 Q8IY67 Q8IY67 1 16 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 2 0.015352 74.944 By MS/MS 4 0 1 1 272460 272460 0 9578 1883 9894 23677 18986;18987 18987 957 2 25641 0 MAAMPLK ______________________________ ______________________________ - M A L K A 2 0 0 0 0 0 0 0 0 0 1 1 2 0 1 0 0 0 0 0 0 0 7 0 760.39755 P17023 P17023 1 7 ZNF19 Zinc finger protein 19 yes yes 2 0.049208 53.522 By MS/MS 2 0 1 1 126390 126390 0 9579 637 9895 23678 18988 18988 315 0 42752 0 MAAPAVK ______________________________ ______________________________ - M A V K V 3 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 7 0 686.37853 Q9Y2R9 Q9Y2R9 1 7 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.054875 88.626 By MS/MS 2 0 1 1 688840 688840 0 9580 2841 9896 23679 18989 18989 1 233000 0 MADDKDSLPKLK ______________________________ ______________________________ - M A L K D 1 0 0 3 0 0 0 0 0 0 2 3 1 0 1 1 0 0 0 0 0 0 12 2 1359.7068 L0R6Q1 L0R6Q1 1 12 SLC35A4 yes yes 2 0.018002 64.297 By MS/MS 10 0 1 1 247770 247770 0 9581 78 9897 23680 18990 18990 54 1 13354 0 MADFWLTEK IDYGKLGDTNERAMRMADFWLTEKDLIPKL NERAMRMADFWLTEKDLIPKLFQVLAPRYK R M A E K D 1 0 0 1 0 0 1 0 0 0 1 1 1 1 0 0 1 1 0 0 0 0 9 0 1139.5321 Q9NRX2 Q9NRX2 75 83 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.00012984 158.07 By MS/MS 9 0 2 2 305440 305440 0 9582 2561 9898;9899 23681;23682 18991;18992 18992 1109 2 6011.1 0 MADLSELLK EKKNSGALEKENQMRMADLSELLKEGTKEA KENQMRMADLSELLKEGTKEAHDRAENTQF R M A L K E 1 0 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 0 9 0 1018.5369 P30519 P30519 30 38 HMOX2 Heme oxygenase 2 yes yes 2 0.010704 98.582 By MS/MS 7 0 2 2 525500 525500 0 9583 773 9900;9901 23683;23684 18993;18994 18993 382 2 8249.4 0 MAEAELVQEGK RKGHILELLTEVTRRMAEAELVQEGKARKT VTRRMAEAELVQEGKARKTNPEIQSTLRKR R M A G K A 2 0 0 0 0 1 3 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1203.5805 P31944 P31944 213 223 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2 2.5597E-08 184.71 By MS/MS By MS/MS 5.22 3.36 2 4 2 2 1 2 2 3 5 13 2578000 736790 1841200 9584 792 9902;9903 23685;23686;23687;23688;23689;23690;23691;23692;23693;23694;23695;23696;23697;23698;23699;23700;23701;23702 18995;18996;18997;18998;18999;19000;19001;19002;19003;19004;19005;19006 19003 387 11 65237 1262700 MAFPLLDMVDLER QGLGFRNVVTVDELRMAFPLLDMVDLERRL LRMAFPLLDMVDLERRLKTTPLPRNDFPRI R M A E R R 1 1 0 2 0 0 1 0 0 0 3 0 2 1 1 0 0 0 0 1 0 0 13 0 1548.768 Q9BXW7 Q9BXW7 162 174 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 0.014113 79.659 By MS/MS 7 0 1 1 231530 231530 0 9585 2361 9904 23703 19007;19008 19008 1077;1078 2 3634.7 0 MAGDPVANVR GQDITTKHMLPTVLRMAGDPVANVRFNVAK PTVLRMAGDPVANVRFNVAKSLQKIGPILD R M A V R F 2 1 1 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 2 0 0 10 0 1028.5073 P30153 P30153 528 537 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 0.012671 90.15 By MS/MS 5.5 0.5 1 1 2 1318900 1318900 0 9586 769 9905 23704;23705 19009 19009 381 1 11192 0 MAILQIMK RQVSDVQKRVQVDVKMAILQIMKELNKRGR RVQVDVKMAILQIMKELNKRGRVLVNDAQK K M A M K E 1 0 0 0 0 1 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 0 8 0 946.53438 Q13263 Q13263 297 304 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.002762 135.87 By MS/MS 4.25 0.433 3 1 4 1618100 1618100 0 9587 1367 9906;9907;9908 23706;23707;23708;23709 19010;19011;19012;19013 19012 794;795 4 141530 0 MAKPEEVLVVENDQGEVVR YLPMLFKVRLLMVSRMAKPEEVLVVENDQG EEVLVVENDQGEVVREFMKDTDSINLYKNM R M A V R E 1 1 1 1 0 1 4 1 0 0 1 1 1 0 1 0 0 0 0 5 0 0 19 1 2140.0834 O14980 O14980 424 442 XPO1 Exportin-1 yes yes 3 5.9079E-05 172.93 By MS/MS 4 0 2 2 3015100 3015100 0 9588 153 9909;9910 23710;23711 19014;19015 19015 87 2 283740 0 MALIGLGVSHPVLK EELHYFVQNHFTSARMALIGLGVSHPVLKQ RMALIGLGVSHPVLKQVAEQFLNMRGGLGL R M A L K Q 1 0 0 0 0 0 0 2 1 1 3 1 1 0 1 1 0 0 0 2 0 0 14 0 1433.8428 P22695 P22695 218 231 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 0.00044609 149.96 By MS/MS 7 0 4 4 3568200 3568200 0 9589 696 9911;9912 23712;23713;23714;23715 19016;19017;19018;19019 19016 345 3 56014 0 MALLATVLGR RAAYFRQAENGMYIRMALLATVLGRF____ GMYIRMALLATVLGRF______________ R M A G R F 2 1 0 0 0 0 0 1 0 0 3 0 1 0 0 0 1 0 0 1 0 0 10 0 1043.6161 P27708 P27708 2215 2224 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 2.6399E-05 163.15 By MS/MS 2 0 1 1 188860 188860 0 9590 745 9913 23716 19020 19020 372 1 63882 0 MALSKSMHARNR ______________________________ ______________________________ - M A N R Y 2 2 1 0 0 0 0 0 1 0 1 1 2 0 0 2 0 0 0 0 0 0 12 2 1400.7129 Q86W50 Q86W50 1 12 METTL16 Methyltransferase-like protein 16 yes yes 2 0.015027 66.692 By MS/MS 7 0 2 2 327080 327080 0 9591 1836 9914 23717;23718 19021;19022 19021 950 2 5134.5 0 MALSRVCWAR ______________________________ ______________________________ - M A A R S 2 2 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 1 0 1 0 0 10 1 1248.622 Q6P1Q0 Q6P1Q0 1 10 LETMD1 LETM1 domain-containing protein 1 yes yes 2 0.046723 60.973 By MS/MS 9 0 1 1 153370 153370 0 9592 1702 9915 23719 19023 19023 909 1 3018.3 0 MALTPTNLNNK ______________________________ ______________________________ - M A N K M 1 0 3 0 0 0 0 0 0 0 2 1 1 0 1 0 2 0 0 0 0 0 11 0 1215.6282 A6NFE2 A6NFE2 1 11 SMCO2 Single-pass membrane and coiled-coil domain-containing protein 2 yes yes 2 0.040842 59.931 By MS/MS 5 0 1 1 867400 867400 0 9593 21 9916 23720 19024 19024 6 1 8699.6 0 MANRRVGR ______________________________ ______________________________ - M A G R G 1 3 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 8 2 958.5243 Q8IZT6 Q8IZT6 1 8 ASPM Abnormal spindle-like microcephaly-associated protein yes yes 2 0.050311 54.787 By MS/MS 3 0 1 1 151230 151230 0 9594 1895 9917 23721 19025 19025 959 0 2767.2 0 MAPLLPIR ______________________________ ______________________________ - M A I R T 1 1 0 0 0 0 0 0 0 1 2 0 1 0 2 0 0 0 0 0 0 0 8 0 909.54699 O00526 O00526 1 8 UPK2 Uroplakin-2 yes yes 2 0.054546 59.641 By MS/MS 5 0 1 1 434630 434630 0 9595 113 9918 23722 19026 19026 69 1 4359.1 0 MAQELYMEQK ERRRTMMEDFRKYRKMAQELYMEQKNERLE RKYRKMAQELYMEQKNERLELRGGVDTDEL K M A Q K N 1 0 0 0 0 2 2 0 0 0 1 1 2 0 0 0 0 0 1 0 0 0 10 0 1269.5733 P55884 P55884 763 772 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 1.2724E-07 188.91 By MS/MS 5.5 2.5 1 3 2 6 4148800 4148800 0 9596 1065 9919;9920 23723;23724;23725;23726;23727;23728 19027;19028;19029;19030;19031;19032 19027 593;594 6 307090 0 MAQFDAK PQFRAVLGEVKLCEKMAQFDAKKFAETQPK GEVKLCEKMAQFDAKKFAETQPKKDTPRKE K M A A K K 2 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 7 0 809.37417 P26641 P26641 213 219 EEF1G Elongation factor 1-gamma yes yes 2 0.037102 99.375 By MS/MS 6.5 0.5 1 1 2 1917100 1917100 0 9597 736 9921 23729;23730 19033 19033 1 15631 0 MATEVAADALGEEWK EVDDERKLRTFYEKRMATEVAADALGEEWK MATEVAADALGEEWKGYVVRISGGNDKQGF R M A W K G 4 0 0 1 0 0 3 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 15 0 1619.7501 P62753 P62753 32 46 RPS6 40S ribosomal protein S6 yes yes 2 6.1227E-56 346.79 By MS/MS 8 0 1 1 1125600 1125600 0 9598 1169 9922 23731 19034 19034 1 14210 0 MATEVAADALGEEWKGYVVR EVDDERKLRTFYEKRMATEVAADALGEEWK AADALGEEWKGYVVRISGGNDKQGFPMKQG R M A V R I 4 1 0 1 0 0 3 2 0 0 1 1 1 0 0 0 1 1 1 3 0 0 20 1 2194.0729 P62753 P62753 32 51 RPS6 40S ribosomal protein S6 yes yes 3 4.3658E-06 135.72 By MS/MS 8 0 1 1 1616400 1616400 0 9599 1169 9923 23732 19035 19035 666 1 20407 0 MATLSVGGK CHVLKYTSKENCNGKMATLSVGGKTVSRFR ENCNGKMATLSVGGKTVSRFRKATSILEFY K M A G K T 1 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 9 0 862.45824 P09001 P09001 142 150 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.033898 82.426 By MS/MS 8 0 1 1 509740 509740 0 9600 531 9924 23733 19036 19036 233 1 6435.4 0 MATNAAAQNAIK EEQQQRLREAAEGLRMATNAAAQNAIKKKL GLRMATNAAAQNAIKKKLVQRLEHAAKQAA R M A I K K 5 0 2 0 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 12 0 1202.6078 Q9Y490 Q9Y490 899 910 TLN1 Talin-1 yes yes 2 6.4951E-13 242.35 By MS/MS 2 0 2 2 1209300 1209300 0 9601 2888 9925;9926 23734;23735 19037;19038 19038 1197 2 409040 0 MATNTVYVFAK FIINGSEKVLIAQEKMATNTVYVFAKKDSK AQEKMATNTVYVFAKKDSKYAYTGECRSCL K M A A K K 2 0 1 0 0 0 0 0 0 0 0 1 1 1 0 0 2 0 1 2 0 0 11 0 1243.6271 P30876 P30876 200 210 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 2.6892E-09 214.05 By MS/MS 3 0 1 1 489870 489870 0 9602 781 9927 23736 19039 19039 386 1 8963.2 0 MAVEGGMKCVK ______________________________ ______________________________ - M A V K F 1 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 2 0 0 11 1 1208.5716 P08962 P08962 1 11 CD63 CD63 antigen yes yes 2 0.048482 46.129 By MS/MS 8 0 1 1 430620 430620 0 9603 530 9928 23737 19040 19040 232 0 5436.6 0 MAVLALLAK KCDSWWAKDSPLETKMAVLALLAKILQIDS SPLETKMAVLALLAKILQIDSSVSFNTSHG K M A A K I 3 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 9 0 928.57796 P78527 P78527 1643 1651 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0008657 135.35 By MS/MS 2 0.707 1 2 1 4 2141300 2141300 0 9604 1225 9929;9930 23738;23739;23740;23741 19041;19042;19043;19044 19041 724 4 645470 0 MAVQDAVDALMQK FLKVSSVFKDEATVRMAVQDAVDALMQKAF VRMAVQDAVDALMQKAFNSSSFNSNTFLTR R M A Q K A 3 0 0 2 0 2 0 0 0 0 1 1 2 0 0 0 0 0 0 2 0 0 13 0 1418.6898 P46060 P46060 488 500 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0022898 120.03 By MS/MS 5 0 2 2 1298200 1298200 0 9605 908 9931;9932 23742;23743 19045;19046 19046 477 2 13021 0 MAVTFIGNSTAIQELFK NVKTAVCDIPPRGLKMAVTFIGNSTAIQEL VTFIGNSTAIQELFKRISEQFTAMFRRKAF K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 P07437 P07437 363 379 TUBB Tubulin beta chain yes yes 2 2.0759E-17 267.77 By MS/MS 6 0 1 1 626390 626390 0 9606 509 9933 23744 19047 19047 209 1 4305.9 0 MAVTGWLESLR ______________________________ ______________________________ - M A L R T 1 1 0 0 0 0 1 1 0 0 2 0 1 0 0 1 1 1 0 1 0 0 11 0 1261.6489 Q9BVM2 Q9BVM2 1 11 DPCD Protein DPCD yes yes 2 0.044683 47.574 By MS/MS 9 0 1 1 0 0 0 9607 2336 9934 23745 19048 19048 1075 1 0 0 MAVVIRLQGLPIVAGTMDIR ______________________________ RLQGLPIVAGTMDIRHFFSGLTIPDGGVHI - M A I R H 2 2 0 1 0 1 0 2 0 3 2 0 2 0 1 0 1 0 0 3 0 0 20 1 2152.2224 Q9NTZ6 Q9NTZ6 1 20 RBM12 RNA-binding protein 12 yes yes 3 0.042631 42.633 By MS/MS By matching 6 0 2 1 1 3641200 3500900 140280 9608 2579 9935 23746;23747 19049 19049 1115 0 24066 143750 MAYEYADER HYVDWRMWRDVKRRKMAYEYADERLRINSL DVKRRKMAYEYADERLRINSLRKNTILPKI K M A E R L 2 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 9 0 1146.4652 O60783 O60783 43 51 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2 0.00074569 138.4 By MS/MS 10 0 2 2 1572100 1572100 0 9609 277 9936;9937 23748;23749 19050;19051;19052 19050 122 3 84728 0 MDDREDLVYQAK ______________________________ ______________________________ - M D A K L 1 1 0 3 0 1 1 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 12 1 1481.682 P62258 P62258 1 12 YWHAE 14-3-3 protein epsilon yes yes 2 0.016733 89.561 By MS/MS By MS/MS 8.5 0.764 4 1 1 4 2 20651000 20401000 250370 9610 1146 9938;9939 23750;23751;23752;23753;23754;23755 19053;19054;19055;19056 19053 650 4 264580 337860 MDDSEVESTASILASVK ______________________________ DSEVESTASILASVKEQEAQFEKLTRALEE - M D V K E 2 0 0 2 0 0 2 0 0 1 1 1 1 0 0 4 1 0 0 2 0 0 17 0 1780.8401 O60716 O60716 1 17 CTNND1 Catenin delta-1 yes yes 2 1.692E-05 127.78 By MS/MS 4 0 2 2 0 0 0 9611 272 9940;9941 23756;23757 19057;19058 19057 118 2 0 0 MDEDVLTTLK ______________________________ ______________________________ - M D L K I 0 0 0 2 0 0 1 0 0 0 2 1 1 0 0 0 2 0 0 1 0 0 10 0 1163.5744 Q9NP72 Q9NP72 1 10 RAB18 Ras-related protein Rab-18 yes yes 2 0.00043752 135.43 By MS/MS 9 0 1 1 217490 217490 0 9612 2524 9942 23758 19059 19059 1 4280.2 0 MDEEFTK QPLRVRGCILTLVERMDEEFTKIMQNTDPH CILTLVERMDEEFTKIMQNTDPHSQEYVEH R M D T K I 0 0 0 1 0 0 2 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 7 0 898.37423 Q99613;B5ME19 Q99613 451 457 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.045312 93.195 By MS/MS 4.5 0.5 1 1 2 3917300 3917300 0 9613 2252 9943 23759;23760 19060 19060 1 332460 0 MDELQLFR AINEDNSVVSLSQPKMDELQLFRGDTVLLK VSLSQPKMDELQLFRGDTVLLKGKKRREAV K M D F R G 0 1 0 1 0 1 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 8 0 1050.5168 P55072 P55072 46 53 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.3858E-06 180.93 By MS/MS 6 2.16 1 1 1 3 3399200 3399200 0 9614 1054 9944;9945 23761;23762;23763 19061;19062 19061 591 2 242870 0 MDELQLFRGDTVLLK AINEDNSVVSLSQPKMDELQLFRGDTVLLK MDELQLFRGDTVLLKGKKRREAVCIVLSDD K M D L K G 0 1 0 2 0 1 1 1 0 0 4 1 1 1 0 0 1 0 0 1 0 0 15 1 1776.9444 P55072 P55072 46 60 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0077418 90.731 By MS/MS 4.5 0.5 1 1 2 549240 549240 0 9615 1054 9946 23764;23765 19063 19063 591 1 33758 0 MDEQALLGLNPNADSDFR ______________________________ QALLGLNPNADSDFRQRALAYFEQLKISPD - M D F R Q 2 1 2 3 0 1 1 1 0 0 3 0 1 1 1 1 0 0 0 0 0 0 18 0 2004.9211 O43592 O43592 1 18 XPOT Exportin-T yes yes 2 0.037363 68.034 By MS/MS 4 0 1 1 58820 58820 0 9616 220 9947 23766 19064 19064 1 5535.4 0 MDESSLLR ______________________________ ______________________________ - M D L R R 0 1 0 1 0 0 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 8 0 949.45388 O60307 O60307 1 8 MAST3 Microtubule-associated serine/threonine-protein kinase 3 yes yes 2 0.043936 51.335 By MS/MS 9 0 1 1 0 0 0 9617 253 9948 23767 19065 19065 114 1 0 0 MDETDASSAVK NLVYVVNYPKDNKRKMDETDASSAVKVKRA NKRKMDETDASSAVKVKRAVQKTSDLIVLG K M D V K V 2 0 0 2 0 0 1 0 0 0 0 1 1 0 0 2 1 0 0 1 0 0 11 0 1152.4969 Q13148 Q13148 85 95 TARDBP TAR DNA-binding protein 43 yes yes 2 0.037851 75.652 By MS/MS 7 0 1 1 496360 496360 0 9618 1358 9949 23768 19066 19066 787 1 7792 0 MDEVYKVILPNFLANGGDGFQMIK VLCTKCRVPSYDPLKMDEVYKVILPNFLAN PNFLANGGDGFQMIKDELLRHDSGDQDINV K M D I K D 1 0 2 2 0 1 1 3 0 2 2 2 2 2 1 0 0 0 1 2 0 0 24 1 2698.3499 P21589 P21589 489 512 NT5E 5-nucleotidase yes yes 3 0.031182 61.181 By MS/MS 6 0 1 1 0 0 0 9619 680 9950 23769 19067 19067 340 1 0 0 MDFLLGNPFSSPVGQR ______________________________ DFLLGNPFSSPVGQRIEKATDGSLQSEDWA - M D Q R I 0 1 1 1 0 1 0 2 0 0 2 0 1 2 2 2 0 0 0 1 0 0 16 0 1763.8665 O60784 O60784 1 16 TOM1 Target of Myb protein 1 yes yes 2 0.00012594 138.02 By MS/MS 6 0 1 1 103880 103880 0 9620 278 9951 23770 19068;19069 19068 123 2 714.12 0 MDGAVMEGPLFLQSQR ______________________________ DGAVMEGPLFLQSQRFGTKRWRKTWAVLYP - M D Q R F 1 1 0 1 0 2 1 2 0 0 2 0 2 1 1 1 0 0 0 1 0 0 16 0 1777.8491 Q99704 Q99704 1 16 DOK1 Docking protein 1 yes yes 3 0.049871 43.548 By MS/MS 8 0 1 1 0 0 0 9621 2259 9952 23771 19070 19070 1050;1051 1 0 0 MDGIVPDIAVGTKR ______________________________ ______________________________ - M D K R G 1 1 0 2 0 0 0 2 0 2 0 1 1 0 1 0 1 0 0 2 0 0 14 1 1470.7864 P26599 P26599 1 14 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 0.032357 67.385 By MS/MS 6 0 1 1 394010 394010 0 9622 733 9953 23772 19071 19071 1 2708.5 0 MDKNELVQK ______________________________ ______________________________ - M D Q K A 0 0 1 1 0 1 1 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 9 1 1103.5645 P63104 P63104 1 9 YWHAZ 14-3-3 protein zeta/delta yes yes 2 0.0011212 117.81 By MS/MS By matching 8 0 3 2 1 4005300 3948200 57156 9623 1195 9954;9955 23773;23774;23775 19072;19073 19072 692 2 49845 77129 MDLVTYFGK KELRQFVPGDEPREKMDLVTYFGKRPPGVL DEPREKMDLVTYFGKRPPGVLHCTTKFCDY K M D G K R 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 0 1 0 1 1 0 0 9 0 1072.5263 P09543 P09543 236 244 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.0050657 109.11 By MS/MS 7 0 1 1 223840 223840 0 9624 537 9956 23776 19074 19074 1 3513.9 0 MDNYADLSDTELTTLLRR ______________________________ YADLSDTELTTLLRRYNIPHGPVVGSTRRL - M D R R Y 1 2 1 3 0 0 1 0 0 0 4 0 1 0 0 1 3 0 1 0 0 0 18 1 2126.0314 P50402 P50402 1 18 EMD Emerin yes yes 2 0.029726 49.483 By MS/MS 7 0 1 1 305540 305540 0 9625 973 9957 23777 19075 19075 531 1 4796.5 0 MDPNTIIEALR ______________________________ ______________________________ - M D L R G 1 1 1 1 0 0 1 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 11 0 1271.6544 O95373 O95373 1 11 IPO7 Importin-7 yes yes 2 0.0082542 86.014 By MS/MS 3.5 0.5 1 1 2 238380 238380 0 9626 406 9958 23778;23779 19076 19076 158 1 15778 0 MDQAIIFCR ILKGEYAVRAIKEHKMDQAIIFCRTKIDCD AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ K M D C R T 1 1 0 1 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 9 0 1152.542 Q92499 Q92499 506 514 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.00012516 169.44 By MS/MS 4.5 0.5 2 2 4 2290600 2290600 0 9627 2046 9959;9960 23780;23781;23782;23783 19077;19078 19078 986 1 89932 0 MDQDSLSSSLK LVRFRIGGKRKVMPKMDQDSLSSSLKTCYK VMPKMDQDSLSSSLKTCYKYLNQTSRSFAA K M D L K T 0 0 0 2 0 1 0 0 0 0 2 1 1 0 0 4 0 0 0 0 0 0 11 0 1209.5547 P37268 P37268 31 41 FDFT1 Squalene synthase yes yes 2 0.00012497 149.33 By MS/MS 7 0 2 2 1711500 1711500 0 9628 845 9961;9962 23784;23785 19079;19080 19079 426 2 26868 0 MDQLRTMVEAADREK ARDGHDQHVLELEAKMDQLRTMVEAADREK MDQLRTMVEAADREKVELLNQLEEEKRKVE K M D E K V 2 2 0 2 0 1 2 0 0 0 1 1 2 0 0 0 1 0 0 1 0 0 15 2 1791.8608 P30622 P30622 410 424 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 4 0.052873 48.704 By MS/MS 7 0 1 1 259940 259940 0 9629 777 9963 23786 19081 19081 384 1 4080.6 0 MDQYFNQMEK TTIGKDLDFEKAKPRMDQYFNQMEKIIKEK KAKPRMDQYFNQMEKIIKEKKTSSRIRFML R M D E K I 0 0 1 1 0 2 1 0 0 0 0 1 2 1 0 0 0 0 1 0 0 0 10 0 1332.5479 Q04637;O43432 Q04637 955 964 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 7.2285E-11 211.64 By MS/MS 2.82 1.11 1 4 3 2 1 11 17083000 17083000 0 9630 1291;210 9964;9965;9966 23787;23788;23789;23790;23791;23792;23793;23794;23795;23796;23797 19082;19083;19084;19085;19086;19087;19088 19086 104;105 7 5105900 0 MDTIDQDDELIR RQKRWWNAYILFYERMDTIDQDDELIRYIS YERMDTIDQDDELIRYISELAITTRPHQII R M D I R Y 0 1 0 4 0 1 1 0 0 2 1 0 1 0 0 0 1 0 0 0 0 0 12 0 1462.661 Q93008 Q93008 1956 1967 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 1.1315E-33 303.71 By MS/MS 2.5 0.957 1 2 2 1 6 5008700 5008700 0 9631 2085 9967;9968 23798;23799;23800;23801;23802;23803 19089;19090;19091 19090 1006 3 1393000 0 MDTSRVQPIKLAR ______________________________ ______________________________ - M D A R V 1 2 0 1 0 1 0 0 0 1 1 1 1 0 1 1 1 0 0 1 0 0 13 2 1513.8399 P62857 P62857 1 13 RPS28 40S ribosomal protein S28 yes yes 3 0.01358 67.118 By MS/MS By matching 10 0 2 1 1 2528200 2465500 62717 9632 1178 9969 23804;23805 19092 19092 682 1 132880 80296 MDVFLMIR ______________________________ ______________________________ - M D I R R 0 1 0 1 0 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 8 0 1023.5245 Q15370 Q15370 1 8 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.0092926 86.953 By MS/MS 10 0 1 1 137960 137960 0 9633 1503 9970 23806 19093 19093 869;870 1 7435.7 0 MDVLVSECSAR ______________________________ ______________________________ - M D A R L 1 1 0 1 1 0 1 0 0 0 1 0 1 0 0 2 0 0 0 2 0 0 11 0 1265.5744 P54136 P54136 1 11 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 9.6573E-05 153.12 By MS/MS 5 0 1 1 622950 622950 0 9634 1043 9971 23807 19094 19094 1 6247.9 0 MDVTDKYKYPEGSDQER IGRYISTKAVGSNARMDVTDKYKYPEGSDQ VTDKYKYPEGSDQERQVFQKALGKLKPNTP R M D E R Q 0 1 0 3 0 1 2 1 0 0 0 2 1 0 1 1 1 0 2 1 0 0 17 2 2059.9157 Q08188 Q08188 434 450 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 3 0.0047099 102.64 By MS/MS 3 0 1 1 169300 0 169300 9635 1306 9972 23808 19095 19095 778 1 0 21550 MEADIITNLR ______________________________ ______________________________ - M E L R C 1 1 1 1 0 0 1 0 0 2 1 0 1 0 0 0 1 0 0 0 0 0 10 0 1174.6016 Q96EA4 Q96EA4 1 10 SPDL1 Protein Spindly yes yes 2 0.00098745 125.97 By MS/MS 5 0 1 1 64584 64584 0 9636 2142 9973 23809 19096 19096 1 647.75 0 MEADLSGFNIDAPR ______________________________ ______________________________ - M E P R W 2 1 1 2 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 0 0 0 14 0 1534.7086 Q96NB2 Q96NB2 1 14 SFXN2 Sideroflexin-2 yes yes 2 2.1254E-05 187.85 By MS/MS 8 0 2 2 1635900 1635900 0 9637 2202 9974;9975 23810;23811 19097;19098 19097 1033 2 20653 0 MEALILEPSLYTVK ______________________________ ______________________________ - M E V K A 1 0 0 0 0 0 2 0 0 1 3 1 1 0 1 1 1 0 1 1 0 0 14 0 1605.8688 P61923 P61923 1 14 COPZ1 Coatomer subunit zeta-1 yes yes 2 1.5216E-05 192.3 By MS/MS 9.5 0.5 1 1 2 1353100 1353100 0 9638 1131 9976 23812;23813 19099;19100 19099 640 2 31622 0 MEALPPVR ______________________________ ______________________________ - M E V R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 0 0 0 0 1 0 0 8 0 911.48987 Q6UE05 Q6UE05 1 8 WBSCR28 Williams-Beuren syndrome chromosomal region 28 protein yes yes 2 0.047224 48.504 By MS/MS 9 0 1 1 0 0 0 9639 1729 9977 23814 19101 19101 921 1 0 0 MEDHQHVPIDIQTSK ______________________________ MEDHQHVPIDIQTSKLLDWLVDRRHCSLKW - M E S K L 0 0 0 2 0 2 1 0 2 2 0 1 1 0 1 1 1 0 0 1 0 0 15 0 1776.8465 Q96JB5 Q96JB5 1 15 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 3 0.044027 52.008 By MS/MS 5 0 1 1 829470 829470 0 9640 2177 9978 23815 19102 19102 1026 1 8319.1 0 MEDYTKIEK ______________________________ ______________________________ - M E E K I 0 0 0 1 0 0 2 0 0 1 0 2 1 0 0 0 1 0 1 0 0 0 9 1 1155.5482 P06493 P06493 1 9 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.0066496 94.309 By MS/MS 8 0 1 1 797530 797530 0 9641 496 9979 23816 19103 19103 196 1 10069 0 MEEADALIESLCR LRGLAVGIALVMYGRMEEADALIESLCRDK GRMEEADALIESLCRDKDPILRRSGMYTVA R M E C R D 2 1 0 1 1 0 3 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 13 0 1535.696 Q99460 Q99460 560 572 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 7.911E-19 270.61 By MS/MS 4.5 0.5 2 2 4 2427100 2427100 0 9642 2246 9980;9981 23817;23818;23819;23820 19104;19105 19105 1041 2 203860 0 MEEADRILIHSLR ______________________________ ______________________________ - M E L R Q 1 2 0 1 0 0 2 0 1 2 2 0 1 0 0 1 0 0 0 0 0 0 13 1 1581.8297 O60826 O60826 1 13 CCDC22 Coiled-coil domain-containing protein 22 yes yes 3 0.0025288 90.861 By MS/MS 5 0 1 1 1202200 1202200 0 9643 280 9982 23821 19106 19106 126 1 12058 0 MEEANIQPNR LQNEYKFSPTDFLAKMEEANIQPNRVTYQR DFLAKMEEANIQPNRVTYQRLIASYCNVGD K M E N R V 1 1 2 0 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 10 0 1200.5557 P42704 P42704 188 197 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.3863E-14 228.31 By MS/MS By MS/MS 3.67 0.745 3 2 1 5 1 12468000 12328000 139550 9644 886 9983;9984 23822;23823;23824;23825;23826;23827 19107;19108;19109;19110;19111 19108 470 4 289950 17762 MEEANIQPNRVTYQR LQNEYKFSPTDFLAKMEEANIQPNRVTYQR MEEANIQPNRVTYQRLIASYCNVGDIEGAS K M E Q R L 1 2 2 0 0 2 2 0 0 1 0 0 1 0 1 0 1 0 1 1 0 0 15 1 1847.8948 P42704 P42704 188 202 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.0031023 97.779 By MS/MS 3.33 0.471 2 1 3 2951700 2951700 0 9645 886 9985 23828;23829;23830 19112;19113 19112 2 67011 0 MEEDQELERK ______________________________ ______________________________ - M E R K I 0 1 0 1 0 1 4 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1305.5871 P0DPB6;P0DPB5 P0DPB6 1 10 yes no 2 0.017499 90.149 By MS/MS 10 0 1 1 326790 326790 0 9646 555 9986 23831 19114 19114 1 17613 0 MEEEILLLEDQNSK KLQLEKVTAEAKIKKMEEEILLLEDQNSKF KMEEEILLLEDQNSKFIKEKKLMEDRIAEC K M E S K F 0 0 1 1 0 1 4 0 0 1 3 1 1 0 0 1 0 0 0 0 0 0 14 0 1689.8131 P35580 P35580 983 996 MYH10 Myosin-10 yes yes 2 0.0007045 130.1 By MS/MS 2 0 1 1 117760 117760 0 9647 825 9987 23832 19115 19115 416 1 39831 0 MEEFKDQLPADECNK AVNMAEGIIHDTETKMEEFKDQLPADECNK MEEFKDQLPADECNKLKEEISKMRELLARK K M E N K L 1 0 1 2 1 1 3 0 0 0 1 2 1 1 1 0 0 0 0 0 0 0 15 1 1852.7971 P38646 P38646 596 610 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.0081726 88.561 By MS/MS 5 0 1 1 1291800 1291800 0 9648 850 9988 23833 19116 19116 1 12956 0 MEEIGILVEK ______________________________ ______________________________ - M E E K A 0 0 0 0 0 0 3 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 10 0 1159.6159 P43686 P43686 1 10 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.0001309 152.81 By MS/MS 6 0 1 1 999050 999050 0 9649 900 9989 23834 19117 19117 1 6867.7 0 MEEVVIAGMSGK ______________________________ ______________________________ - M E G K L 1 0 0 0 0 0 2 2 0 1 0 1 2 0 0 1 0 0 0 2 0 0 12 0 1249.6046 P49327 P49327 1 12 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.6914E-07 173.71 By MS/MS 2.64 0.881 1 4 4 2 11 1912500 1912500 0 9650 946 9990;9991;9992 23835;23836;23837;23838;23839;23840;23841;23842;23843;23844;23845 19118;19119;19120;19121;19122;19123;19124;19125;19126;19127;19128;19129 19126 507;508 12 418650 0 MEFVSEVQR MERYQHYRQTVRALRMEFVSEVQRKVHEAR TVRALRMEFVSEVQRKVHEARAGVLAERKA R M E Q R K 0 1 0 0 0 1 2 0 0 0 0 0 1 1 0 1 0 0 0 2 0 0 9 0 1123.5332 Q9BYN8 Q9BYN8 72 80 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.00038098 150.36 By MS/MS 8.5 0.5 2 2 4 2145400 2145400 0 9651 2374 9993;9994 23846;23847;23848;23849 19130;19131;19132;19133 19133 1084 4 34626 0 MEGGFGSDFGGSGSGK ______________________________ EGGFGSDFGGSGSGKLDPGLIMEQVKVQIA - M E G K L 0 0 0 1 0 0 1 7 0 0 0 1 1 2 0 3 0 0 0 0 0 0 16 0 1475.5987 Q9Y5L4 Q9Y5L4 1 16 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 1.9661E-17 265.75 By MS/MS 10 0 1 1 368630 368630 0 9652 2916 9995 23850 19134 19134 1210 1 19868 0 MEGHYVHAGNIIATQR NLGGKSSGRRQGIKKMEGHYVHAGNIIATQ EGHYVHAGNIIATQRHFRWHPGAHVGVGKN K M E Q R H 2 1 1 0 0 1 1 2 2 2 0 0 1 0 0 0 1 0 1 1 0 0 16 0 1795.8788 Q9P0M9 Q9P0M9 56 71 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 3 5.7965E-05 135.72 By MS/MS 10 0 1 1 0 0 0 9653 2666 9996 23851 19135 19135 1134 1 0 0 MEGPLSVFGDR ______________________________ ______________________________ - M E D R S 0 1 0 1 0 0 1 2 0 0 1 0 1 1 1 1 0 0 0 1 0 0 11 0 1206.5703 P17987 P17987 1 11 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.6128E-06 185.33 By MS/MS 5.93 2.49 1 1 1 2 3 2 2 1 1 14 7497900 7497900 0 9654 648 9997;9998 23852;23853;23854;23855;23856;23857;23858;23859;23860;23861;23862;23863;23864;23865 19136;19137;19138;19139;19140;19141;19142;19143;19144;19145;19146;19147;19148;19149;19150;19151 19147 317 14 109720 0 MEGPLSVFGDRSTGETIR ______________________________ PLSVFGDRSTGETIRSQNVMAAASIANIVK - M E I R S 0 2 0 1 0 0 2 3 0 1 1 0 1 1 1 2 2 0 0 1 0 0 18 1 1950.9469 P17987 P17987 1 18 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00014197 137.81 By MS/MS 6 0 1 1 375410 375410 0 9655 648 9999 23866 19152;19153 19152 2 2580.6 0 MEGVSALLAR ______________________________ ______________________________ - M E A R C 2 1 0 0 0 0 1 1 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1045.559 Q5SNT2 Q5SNT2 1 10 TMEM201 Transmembrane protein 201 yes yes 2 0.0012241 126.07 By MS/MS 5.25 1.09 1 2 1 4 219820 219820 0 9656 1618 10000;10001 23867;23868;23869;23870 19154;19155;19156;19157 19155 888 3 6342.3 0 MEIGLPDEK LIDEALLRPGRLEVKMEIGLPDEKGRLQIL GRLEVKMEIGLPDEKGRLQILHIHTARMRG K M E E K G 0 0 0 1 0 0 2 1 0 1 1 1 1 0 1 0 0 0 0 0 0 0 9 0 1030.5005 P46459 P46459 393 401 NSF Vesicle-fusing ATPase yes yes 2 0.0071098 105.52 By MS/MS 5 0 1 1 837610 837610 0 9657 912 10002 23871 19158 19158 1 8400.8 0 MEKTELIQK ______________________________ ______________________________ - M E Q K A 0 0 0 0 0 1 2 0 0 1 1 2 1 0 0 0 1 0 0 0 0 0 9 1 1118.6005 P27348 P27348 1 9 YWHAQ 14-3-3 protein theta yes yes 2 0.00075847 138.06 By MS/MS 8 0 1 1 2050000 2050000 0 9658 739 10003 23872 19159 19159 1 25881 0 MELEAMSR ______________________________ ______________________________ - M E S R Y 1 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 8 0 965.43104 P61165 P61165 1 8 TMEM258 Transmembrane protein 258 yes yes 2 0.022998 99.136 By MS/MS 10 0 3 3 780880 780880 0 9659 1114 10004;10005;10006 23873;23874;23875 19160;19161;19162 19160 631;632 1 42087 0 MELITILEK ______________________________ ______________________________ - M E E K T 0 0 0 0 0 0 2 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 9 0 1088.6151 Q14974 Q14974 1 9 KPNB1 Importin subunit beta-1 yes yes 2 0.00013544 152.34 By MS/MS 4.6 0.8 3 1 1 5 1124900 1124900 0 9660 1462 10007;10008 23876;23877;23878;23879;23880 19163;19164;19165;19166;19167;19168 19163 858 6 98061 0 MELLEDALVLR MPEVIPILEVQFSKKMELLEDALVLRSART FSKKMELLEDALVLRSARTSSPAEKSCSVW K M E L R S 1 1 0 1 0 0 2 0 0 0 4 0 1 0 0 0 0 0 0 1 0 0 11 0 1300.7061 Q5SQN1 Q5SQN1 347 357 SNAP47 Synaptosomal-associated protein 47 yes yes 2 0.00011458 150.61 By MS/MS 6 0 1 1 112420 112420 0 9661 1619 10009 23881 19169 19169 1 772.82 0 MELLTFRDVAIEFSPEEWK ______________________________ TFRDVAIEFSPEEWKCLDPDQQNLYRDVML - M E W K C 1 1 0 1 0 0 4 0 0 1 2 1 1 2 1 1 1 1 0 1 0 0 19 1 2339.1508 Q15928;Q8TB69;B4DXR9 Q15928 1 19 ZNF141;ZNF519;ZNF732 Zinc finger protein 141;Zinc finger protein 519;Zinc finger protein 732 yes no 3 0.038209 46.159 By MS/MS 10 0 1 1 219950 0 219950 9662 1540 10010 23882 19170 19170 1 0 281590 MELQPPEASIAVVSIPR ______________________________ LQPPEASIAVVSIPRQLPGSHSEAGVQGLS - M E P R Q 2 1 0 0 0 1 2 0 0 2 1 0 1 0 3 2 0 0 0 2 0 0 17 0 1835.9815 P08195 P08195 1 17 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.00017066 167.89 By MS/MS 4 0 2 2 727580 727580 0 9663 519 10011;10012 23883;23884 19171;19172;19173 19172 221 3 68470 0 MELSAEYLR ______________________________ ______________________________ - M E L R E 1 1 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 9 0 1110.5379 Q9H3K6 Q9H3K6 1 9 BOLA2 BolA-like protein 2 yes yes 2 0.0003004 140.5 By MS/MS 10 0 1 1 372050 372050 0 9664 2437 10013 23885 19174 19174 1092 1 20052 0 MELSAEYLREK ______________________________ ______________________________ - M E E K L 1 1 0 0 0 0 3 0 0 0 2 1 1 0 0 1 0 0 1 0 0 0 11 1 1367.6755 Q9H3K6 Q9H3K6 1 11 BOLA2 BolA-like protein 2 yes yes 2 0.0080152 80.24 By MS/MS 10 0 1 1 0 0 0 9665 2437 10014 23886 19175 19175 1092 1 0 0 MELSESVQK ______________________________ ______________________________ - M E Q K G 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 2 0 0 0 1 0 0 9 0 1049.5063 Q9UBI1 Q9UBI1 1 9 COMMD3 COMM domain-containing protein 3 yes yes 2 0.024445 88.177 By MS/MS 9 0 1 1 271120 271120 0 9666 2698 10015 23887 19176 19176 1 5335.6 0 MELVQVLKR ______________________________ ______________________________ - M E K R G 0 1 0 0 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 9 1 1114.6532 Q9UI09 Q9UI09 1 9 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 0.030929 75.043 By MS/MS 10 0 1 1 305180 305180 0 9667 2733 10016 23888 19177 19177 1158 0 16448 0 MEMEKEFEQIDK ______________________________ ______________________________ - M E D K S 0 0 0 1 0 1 4 0 0 1 0 2 2 1 0 0 0 0 0 0 0 0 12 1 1555.6898 P18031 P18031 1 12 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.2752E-12 236.22 By MS/MS 6 0 2 2 5269400 5269400 0 9668 649 10017;10018 23889;23890 19178;19179 19178 321 1 36223 0 MENAHTK ______________________________ ______________________________ - M E T K T 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 7 0 829.37524 P16615 P16615 1 7 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.046015 96.492 By MS/MS 2 0 1 1 671690 671690 0 9669 635 10019 23891 19180 19180 1 227190 0 MENQVLQEAR AKATLTQMLNVIFTRMENQVLQEARELEKP VIFTRMENQVLQEARELEKPIQSKPQSPVI R M E A R E 1 1 1 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 0 1216.587 Q9Y6D5 Q9Y6D5 197 206 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.00017326 148.56 By MS/MS 1.5 0.5 1 1 2 599520 599520 0 9670 2940 10020 23892;23893 19181 19181 1216 1 155800 0 MENQVLTPHVYWAQR ______________________________ MENQVLTPHVYWAQRHRELYLRVELSDVQN - M E Q R H 1 1 1 0 0 2 1 0 1 0 1 0 1 0 1 0 1 1 1 2 0 0 15 0 1870.9148 Q9P035 Q9P035 1 15 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.00025177 156 By MS/MS 1.5 0.5 1 1 2 237840 237840 0 9671 2661 10021 23894;23895 19182 19182 1131 1 64177 0 MEPAVSEPMRDQVAR ______________________________ MEPAVSEPMRDQVARTHLTEDTPKVNADIE - M E A R T 2 2 0 1 0 1 2 0 0 0 0 0 2 0 2 1 0 0 0 2 0 0 15 1 1714.8131 Q15738 Q15738 1 15 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.00034112 136.53 By MS/MS 7 0 1 1 1198400 1198400 0 9672 1526 10022 23896 19183 19183 1 18813 0 MEPDGTYEPGFVGIR ______________________________ MEPDGTYEPGFVGIRFCQECNNMLYPKEDK - M E I R F 0 1 0 1 0 0 2 3 0 1 0 0 1 1 2 0 1 0 1 1 0 0 15 0 1666.7661 P36954 P36954 1 15 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 2 0.00061166 115.18 By MS/MS 10 0 1 1 85105 85105 0 9673 841 10023 23897 19184 19184 423 1 4586.8 0 MEPLAAYPLK ______________________________ ______________________________ - M E L K C 2 0 0 0 0 0 1 0 0 0 2 1 1 0 2 0 0 0 1 0 0 0 10 0 1131.5998 Q8TED1 Q8TED1 1 10 GPX8 Probable glutathione peroxidase 8 yes yes 2 0.016573 89.355 By MS/MS 9 0 1 1 144920 144920 0 9674 2000 10024 23898 19185 19185 1 2852.1 0 MEQVNELKEK ______________________________ ______________________________ - M E E K G 0 0 1 0 0 1 3 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 10 1 1246.6227 P31948 P31948 1 10 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.00044978 133.99 By MS/MS 5.5 0.5 2 2 4 6710700 6710700 0 9675 795 10025;10026 23899;23900;23901;23902 19186;19187 19187 390 2 61473 0 MERASLIQK ______________________________ ______________________________ - M E Q K A 1 1 0 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 9 1 1074.5856 P31947 P31947 1 9 SFN 14-3-3 protein sigma yes yes 2 0.0052908 111.74 By MS/MS 4 0.816 1 1 1 3 4919300 4919300 0 9676 794 10027 23903;23904;23905 19188 19188 1 393430 0 MESAGLEQLLR ______________________________ ______________________________ - M E L R E 1 1 0 0 0 1 2 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 11 0 1245.6387 Q8TEX9 Q8TEX9 1 11 IPO4 Importin-4 yes yes 2 9.8478E-05 140.49 By MS/MS 3.75 0.829 2 1 1 4 419730 419730 0 9677 2005 10028;10029 23906;23907;23908;23909 19189;19190;19191;19192 19189 972 4 12354 0 MESAIAEGGASR ______________________________ ______________________________ - M E S R F 3 1 0 0 0 0 2 2 0 1 0 0 1 0 0 2 0 0 0 0 0 0 12 0 1177.5397 P78344 P78344 1 12 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00027414 147.62 By MS/MS 4.33 0.471 2 1 3 3699500 3699500 0 9678 1219 10030;10031 23910;23911;23912 19193;19194 19194 705 2 323460 0 MESGIEPSVDLETLDER YLVTEGFKEAAEKFRMESGIEPSVDLETLD SGIEPSVDLETLDERIKIREMILKGQIQEA R M E E R I 0 1 0 2 0 0 4 1 0 1 2 0 1 0 1 2 1 0 0 1 0 0 17 0 1918.883 Q9NWU2 Q9NWU2 51 67 GID8 Glucose-induced degradation protein 8 homolog yes yes 2 0.00037251 131.08 By MS/MS 8 0 1 1 408720 408720 0 9679 2613 10032 23913 19195 19195 1121 1 5160 0 MESGLSDVTK QHWISYNEASSQLLRMESGLSDVTKDQ___ SQLLRMESGLSDVTKDQ_____________ R M E T K D 0 0 0 1 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 1 0 0 10 0 1065.5012 Q8WUY1 Q8WUY1 197 206 THEM6 Protein THEM6 yes yes 2 0.00026107 142.98 By MS/MS 9 0 1 1 443440 443440 0 9680 2019 10033 23914 19196 19196 1 8727 0 MESGLSDVTKDQ QHWISYNEASSQLLRMESGLSDVTKDQ___ LLRMESGLSDVTKDQ_______________ R M E D Q - 0 0 0 2 0 1 1 1 0 0 1 1 1 0 0 2 1 0 0 1 0 0 12 1 1308.5867 Q8WUY1 Q8WUY1 197 208 THEM6 Protein THEM6 yes yes 2 1.0066E-11 247.96 By MS/MS 9 0 2 2 2929900 2929900 0 9681 2019 10034;10035 23915;23916 19197;19198 19198 978 2 57660 0 MESNKDEAER ______________________________ ______________________________ - M E E R C 1 1 1 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 10 1 1207.5139 Q9NXW2 Q9NXW2 1 10 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0020328 107.55 By MS/MS 7 0 2 2 1304500 1304500 0 9682 2630 10036;10037 23917;23918 19199;19200 19199 1124 2 20478 0 METFDPTELPELLK ______________________________ ______________________________ - M E L K L 0 0 0 1 0 0 3 0 0 0 3 1 1 1 2 0 2 0 0 0 0 0 14 0 1661.8222 P49642 P49642 1 14 PRIM1 DNA primase small subunit yes yes 2 0.00018083 157.38 By MS/MS 6 0 1 1 136710 136710 0 9683 953 10038 23919 19201;19202 19201 525 2 939.75 0 MEVQEQEEDISSLIR DNSMNVDQDGDPSDRMEVQEQEEDISSLIR MEVQEQEEDISSLIRSCKFSMKMKMIDSAR R M E I R S 0 1 0 1 0 2 4 0 0 2 1 0 1 0 0 2 0 0 0 1 0 0 15 0 1804.8513 P78527 P78527 3218 3232 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.719E-44 332.56 By MS/MS 1.5 0.5 2 2 4 611290 611290 0 9684 1225 10039;10040 23920;23921;23922;23923 19203;19204;19205;19206 19203 725 4 175080 0 MFADYLAHESR DEIKPSSAPELQAVRMFADYLAHESRRDSI QAVRMFADYLAHESRRDSIVAELDREMSRS R M F S R R 2 1 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 11 0 1338.6027 O14579 O14579 86 96 COPE Coatomer subunit epsilon yes yes 2;3 0.00019128 143.89 By MS/MS 8 0 4 4 8251300 8251300 0 9685 127 10041;10042 23924;23925;23926;23927 19207;19208;19209;19210;19211 19210 75 5 104170 0 MFADYLAHESRR DEIKPSSAPELQAVRMFADYLAHESRRDSI AVRMFADYLAHESRRDSIVAELDREMSRSV R M F R R D 2 2 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 12 1 1494.7038 O14579 O14579 86 97 COPE Coatomer subunit epsilon yes yes 3 0.014219 81.865 By MS/MS 8 0 1 1 3835100 3835100 0 9686 127 10043 23928 19212 19212 75 1 48418 0 MFEDPETTR AQLKQLQAETEPIVKMFEDPETTRQMQSTR TEPIVKMFEDPETTRQMQSTRDGRMLFDYL K M F T R Q 0 1 0 1 0 0 2 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 9 0 1124.4808 P60228 P60228 94 102 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00028292 153.08 By MS/MS By MS/MS 7.25 1.48 4 1 1 1 1 6 2 29305000 29149000 155880 9687 1090 10044;10045 23929;23930;23931;23932;23933;23934;23935;23936 19213;19214;19215;19216;19217 19216 609 5 229820 159730 MFEFQNFER MPEGGGALAEGFQVRMFEFQNFERRFEECI EGFQVRMFEFQNFERRFEECISQSAVKTKF R M F E R R 0 1 1 0 0 1 2 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 9 0 1246.5441 O95140 O95140 335 343 MFN2 Mitofusin-2 yes yes 2 0.00059955 143.03 By MS/MS 5 0 2 2 1170100 1170100 0 9688 386 10046;10047 23937;23938 19218;19219 19218 154 2 11736 0 MFEFYER GAMTPFFWLFEEREKMFEFYERVSGARMHA WLFEEREKMFEFYERVSGARMHAAYIRPGG K M F E R V 0 1 0 0 0 0 2 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 7 0 1020.4375 O75306 O75306 210 216 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.013192 127.12 By MS/MS 7 0 2 2 4012100 4012100 0 9689 308 10048;10049 23939;23940 19220;19221 19221 132 2 62983 0 MFEIVFEDPK IQGGTSHHLGQNFSKMFEIVFEDPKIPGEK QNFSKMFEIVFEDPKIPGEKQFAYQNSWGL K M F P K I 0 0 0 1 0 0 2 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 10 0 1253.6002 P07814 P07814 1251 1260 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00057624 131.44 By MS/MS 3 0 2 2 199480 199480 0 9690 512 10050;10051 23941;23942 19222;19223;19224;19225 19222 218 4 3649.9 0 MFFDALYDEDVVK QALVVTLEQPPNLLRMFFDALYDEDVVKED LRMFFDALYDEDVVKEDAFYSWESSKDPAE R M F V K E 1 0 0 3 0 0 1 0 0 0 1 1 1 2 0 0 0 0 1 2 0 0 13 0 1590.7276 Q04637 Q04637 1544 1556 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.3767E-08 220.1 By MS/MS 2 0 3 3 486260 486260 0 9691 1291 10052;10053 23943;23944;23945 19226;19227;19228;19229 19226 775 4 164470 0 MFILSDGEGK VCFVGRLEKIHPTGKMFILSDGEGKNGTIE HPTGKMFILSDGEGKNGTIELMEPLDEEIS K M F G K N 0 0 0 1 0 0 1 2 0 1 1 1 1 1 0 1 0 0 0 0 0 0 10 0 1095.527 P35244 P35244 40 49 RPA3 Replication protein A 14 kDa subunit yes yes 2 0.0013639 115.7 By MS/MS 10 0 1 1 416650 416650 0 9692 815 10054 23946 19230 19230 403 1 22456 0 MFLSFPTTK VGGHAAEYGAEALERMFLSFPTTKTYFPHF AEALERMFLSFPTTKTYFPHFDLSHGSAQV R M F T K T 0 0 0 0 0 0 0 0 0 0 1 1 1 2 1 1 2 0 0 0 0 0 9 0 1070.5471 CON__P01966;P69905 CON__P01966 33 41 HBA1 Hemoglobin subunit alpha yes no 2 0.022116 87.696 By MS/MS 10 0 1 1 362170 362170 0 + 9693 38 10055 23947 19231 19231 16 1 19520 0 MFLVGLTGGIASGK ______________________________ ______________________________ - M F G K S 1 0 0 0 0 0 0 4 0 1 2 1 1 1 0 1 1 0 0 1 0 0 14 0 1349.7377 Q8WVC6 Q8WVC6 1 14 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 6.2893E-05 183.03 By MS/MS 9 0 2 2 510050 510050 0 9694 2024 10056;10057 23948;23949 19232;19233 19232 981 2 10038 0 MFQAAGAAQATPSHDAK ______________________________ QAAGAAQATPSHDAKGGGSSTVQRSKSFSL - M F A K G 6 0 0 1 0 2 0 1 1 0 0 1 1 1 1 1 1 0 0 0 0 0 17 0 1700.7941 Q9BT23 Q9BT23 1 17 LIMD2 LIM domain-containing protein 2 yes yes 2 0.00016313 142.1 By MS/MS 10 0 1 1 334690 334690 0 9695 2313 10058 23950 19234 19234 0 18039 0 MFVLDEADEMLSR FDMLNRRYLSPKYIKMFVLDEADEMLSRGF IKMFVLDEADEMLSRGFKDQIYDIFQKLNS K M F S R G 1 1 0 2 0 0 2 0 0 0 2 0 2 1 0 1 0 0 0 1 0 0 13 0 1554.7058 P60842;Q14240 P60842 178 190 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2;3 2.5671E-33 295.79 By MS/MS 5.19 2.18 5 4 3 4 5 18 7 5 1 52 912740000 912740000 0 9696 1097 10059;10060;10061 23951;23952;23953;23954;23955;23956;23957;23958;23959;23960;23961;23962;23963;23964;23965;23966;23967;23968;23969;23970;23971;23972;23973;23974;23975;23976;23977;23978;23979;23980;23981;23982;23983;23984;23985;23986;23987;23988;23989;23990;23991;23992;23993;23994;23995;23996;23997;23998;23999;24000;24001;24002 19235;19236;19237;19238;19239;19240;19241;19242;19243;19244;19245;19246;19247;19248;19249;19250;19251;19252;19253;19254;19255;19256;19257;19258;19259;19260;19261;19262;19263;19264;19265;19266;19267;19268;19269;19270;19271;19272;19273;19274;19275;19276;19277;19278;19279;19280;19281;19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296;19297;19298;19299;19300;19301;19302;19303 19242 626;627 67 8345300 0 MGAGIAVLFK PKTDSLAHCISEDCRMGAGIAVLFKKKFGG SEDCRMGAGIAVLFKKKFGGVQELLNQQKK R M G F K K 2 0 0 0 0 0 0 2 0 1 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1005.5681 Q9Y530 Q9Y530 40 49 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 2 0.0056803 101.64 By MS/MS 10 0 1 1 0 0 0 9697 2906 10062 24003 19304 19304 1209 1 0 0 MGAGMGFGLER RMGQTMERIGSGVERMGAGMGFGLERMAAP GVERMGAGMGFGLERMAAPIDRVGQTIERM R M G E R M 1 1 0 0 0 0 1 4 0 0 1 0 2 1 0 0 0 0 0 0 0 0 11 0 1124.5107 P52272 P52272 486 496 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.020553 85.355 By MS/MS 5 0 1 1 1126600 1126600 0 9698 1012 10063 24004 19305 19305 1 11300 0 MGANNLER RMGPVMDRMATGLERMGANNLERMGLERMG MATGLERMGANNLERMGLERMGANSLERMG R M G E R M 1 1 2 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 8 0 903.42325 P52272 P52272 558 565 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0073618 113.41 By MS/MS 5 0 1 1 1468100 1468100 0 9699 1012 10064 24005 19306 19306 556 1 14725 0 MGANSLER ERMGANNLERMGLERMGANSLERMGLERMG ERMGLERMGANSLERMGLERMGANSLERMG R M G E R M 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 876.41235 P52272 P52272 571 578 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0099451 110.81 By MS/MS By matching 5 0 2 1 1 1979800 1962100 17733 9700 1012 10065 24006;24007 19307 19307 1 19679 14892 MGEAIETTQQLYPSLLER IKNRQRIQKLVLAGRMGEAIETTQQLYPSL AIETTQQLYPSLLERNPNLLFTLKVRQFIE R M G E R N 1 1 0 0 0 2 3 1 0 1 3 0 1 0 1 1 2 0 1 0 0 0 18 0 2078.0354 Q96S59 Q96S59 419 436 RANBP9 Ran-binding protein 9 yes yes 2 2.0305E-17 266.07 By MS/MS 4 0 1 1 315830 315830 0 9701 2232 10066 24008 19308 19308 1039 1 29722 0 MGESDDSILR NGQFKTYAICGAIRRMGESDDSILRLAKAD GAIRRMGESDDSILRLAKADGIVSKNF___ R M G L R L 0 1 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 10 0 1121.5023 P63220 P63220 62 71 RPS21 40S ribosomal protein S21 yes yes 2 1.4691E-07 187.22 By MS/MS By MS/MS 9.57 0.728 1 1 5 4 3 35746000 35086000 659910 9702 1200 10067;10068 24009;24010;24011;24012;24013;24014;24015 19309;19310;19311;19312;19313;19314;19315 19315 696 7 1891000 897380 MGEVEISALAYVK ______________________________ ______________________________ - M G V K M 2 0 0 0 0 0 2 1 0 1 1 1 1 0 0 1 0 0 1 2 0 0 13 0 1408.7272 Q9Y3B6 Q9Y3B6 1 13 EMC9 ER membrane protein complex subunit 9 yes yes 2 0.047243 50.034 By MS/MS 3 0 1 1 115280 0 115280 9703 2865 10069 24016 19316 19316 0 0 14673 MGIGMAEFLDK LAEKYQTVIADICRRMGIGMAEFLDKHVTS ICRRMGIGMAEFLDKHVTSEQEWDKYCHYV R M G D K H 1 0 0 1 0 0 1 2 0 1 1 1 2 1 0 0 0 0 0 0 0 0 11 0 1210.5726 P37268 P37268 150 160 FDFT1 Squalene synthase yes yes 2 0.035588 78.098 By MS/MS 7 0 1 1 82875 82875 0 9704 845 10070 24017 19317 19317 0 1301 0 MGITEYNNQCR IDKTLGIRGPEDVAKMGITEYNNQCRAIVM DVAKMGITEYNNQCRAIVMRYSAEWKSTVS K M G C R A 0 1 2 0 1 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 11 0 1384.5864 P41252 P41252 111 121 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 3.6466E-13 234.2 By MS/MS 3.75 0.829 2 1 1 4 3632400 3632400 0 9705 871 10071;10072 24018;24019;24020;24021 19318;19319 19318 457 2 85832 0 MGLAMGGGGGASFDR MGPAMGPALGAGIERMGLAMGGGGGASFDR MGLAMGGGGGASFDRAIEMERGNFGGSFAG R M G D R A 2 1 0 1 0 0 0 6 0 0 1 0 2 1 0 1 0 0 0 0 0 0 15 0 1382.6071 P52272 P52272 607 621 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.00022573 146.16 By MS/MS 5 0 1 1 567200 567200 0 9706 1012 10073 24022 19320 19320 557;558 1 5688.7 0 MGLIQTADQLR SVDIKKVLLEMRKFRMGLIQTADQLRFSYL RKFRMGLIQTADQLRFSYLAVIEGAKFIMG R M G L R F 1 1 0 1 0 2 0 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 11 0 1244.6547 P18031 P18031 258 268 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.021448 99.973 By MS/MS 6.5 0.5 1 1 2 3437800 3437800 0 9707 649 10074 24023;24024 19321 19321 322 0 28266 0 MGLVDQLVEPLGPGLKPPEER MMLTGRSIRADRAKKMGLVDQLVEPLGPGL LVEPLGPGLKPPEERTIEYLEEVAITFAKG K M G E R T 0 1 0 1 0 1 3 3 0 0 4 1 1 0 4 0 0 0 0 2 0 0 21 1 2273.209 P40939 P40939 215 235 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.010162 74.029 By MS/MS 5 0 1 1 706920 706920 0 9708 865 10075 24025 19322 19322 450 1 7090 0 MGNGVKEGPVR ______________________________ ______________________________ - M G V R L 0 1 1 0 0 0 1 3 0 0 0 1 1 0 1 0 0 0 0 2 0 0 11 1 1142.5866 Q86VD7 Q86VD7 1 11 SLC25A42 Mitochondrial coenzyme A transporter SLC25A42 yes yes 2 0.039901 62.823 By MS/MS 3 0 1 1 665210 665210 0 9709 1829 10076 24026 19323 19323 949 1 12172 0 MGPAMGPALGAGIER ERMGLERMGANSLERMGPAMGPALGAGIER MGPAMGPALGAGIERMGLAMGGGGGASFDR R M G E R M 3 1 0 0 0 0 1 4 0 1 1 0 2 0 2 0 0 0 0 0 0 0 15 0 1426.7061 P52272 P52272 592 606 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.00033941 129 By MS/MS 5 0 2 2 2944800 2944800 0 9710 1012 10077;10078 24027;24028 19324;19325 19324 559;560 2 29535 0 MGPGATAGGAEK VEQSFMTMAAEIKKRMGPGATAGGAEKSNV KKRMGPGATAGGAEKSNVKIQSTPVKQSGG R M G E K S 3 0 0 0 0 0 1 4 0 0 0 1 1 0 1 0 1 0 0 0 0 0 12 0 1045.4862 P62820 P62820 176 187 RAB1A Ras-related protein Rab-1A yes yes 2 6.5222E-06 174.86 By MS/MS 8.25 0.829 1 1 2 4 1512900 1512900 0 9711 1171 10079;10080 24029;24030;24031;24032 19326;19327 19327 669 2 28748 0 MGPNIYELR QLLLEFSFWNEPQPRMGPNIYELRTYKLKP NEPQPRMGPNIYELRTYKLKPGTMIEWGNN R M G L R T 0 1 1 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 1 0 0 0 9 0 1091.5434 Q9BPW8 Q9BPW8 180 188 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.0017907 123.21 By MS/MS By MS/MS 8.4 0.49 3 2 4 1 17927000 17875000 51851 9712 2278 10081;10082 24033;24034;24035;24036;24037 19328;19329;19330;19331 19329 1062 4 228560 69970 MGSQVIIPYR ATGFLGRYVVNHLGRMGSQVIIPYRCDKYD NHLGRMGSQVIIPYRCDKYDIMHLRPMGDL R M G Y R C 0 1 0 0 0 1 0 1 0 2 0 0 1 0 1 1 0 0 1 1 0 0 10 0 1162.6169 Q16795 Q16795 76 85 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.00086999 125.57 By MS/MS 7 0 1 1 1688600 1688600 0 9713 1559 10083 24038 19332 19332 876 1 26509 0 MGVNLTR SSPEMNLPTVSALRKMGVNLTRSNKETVKH PTVSALRKMGVNLTRSNKETVKHSDVLFLA K M G T R S 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 1 0 0 7 0 789.41671 Q96C36 Q96C36 48 54 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.037102 99.375 By MS/MS 8 0 2 2 6149600 6149600 0 9714 2120 10084;10085 24039;24040 19333;19334 19334 1015 2 77638 0 MGVVPPGTQVEQLLYAK ERELDWAKVMVEKSRMGVVPPGTQVEQLLY VVPPGTQVEQLLYAKKLYDSAFHPDTGEKM R M G A K K 1 0 0 0 0 2 1 2 0 0 2 1 1 0 2 0 1 0 1 3 0 0 17 0 1828.9757 Q96NB2 Q96NB2 55 71 SFXN2 Sideroflexin-2 yes yes 2 0.00054518 126.5 By MS/MS 7.5 0.5 1 1 2 2422900 2422900 0 9715 2202 10086 24041;24042 19335 19335 1034 1 30814 0 MHLSQIQR YTRKAEFRKLCDNLRMHLSQIQRHHNQSTA KLCDNLRMHLSQIQRHHNQSTAINLNNPES R M H Q R H 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 8 0 1011.5284 Q14152 Q14152 203 210 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 9.2688E-05 148.04 By MS/MS 3.22 0.916 2 4 2 1 9 6593600 6593600 0 9716 1422 10087;10088 24043;24044;24045;24046;24047;24048;24049;24050;24051 19336;19337;19338;19339;19340 19338 820 5 283130 0 MIAGQVLDINLAAEPK NERNARAAVAGEDGRMIAGQVLDINLAAEP IAGQVLDINLAAEPKVNRGKAGVKRSAAEM R M I P K V 3 0 1 1 0 1 1 1 0 2 2 1 1 0 1 0 0 0 0 1 0 0 16 0 1681.9073 P07910 P07910 74 89 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 6.5559E-11 231.69 By MS/MS By matching 7 0 2 1 1 1721700 1690600 31080 9717 514 10089 24052;24053 19341 19341 219 1 26539 55974 MIDLIIPR VNTREEVEDLCRLDKMIDLIIPRGSSQLVR DLCRLDKMIDLIIPRGSSQLVRDIQKAAKG K M I P R G 0 1 0 1 0 0 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 0 8 0 969.56812 P54886 P54886 551 558 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0045935 126.67 By MS/MS By MS/MS 5.25 0.968 2 3 2 1 7 1 13869000 13772000 97268 9718 1048 10090;10091 24054;24055;24056;24057;24058;24059;24060;24061 19342;19343;19344;19345 19343 581 4 166250 81684 MIDLSGNPVLR LHLHSSVVRGSESHKMIDLSGNPVLRIYYT ESHKMIDLSGNPVLRIYYTSRPALFTLCAG K M I L R I 0 1 1 1 0 0 0 1 0 1 2 0 1 0 1 1 0 0 0 1 0 0 11 0 1213.6489 O14735 O14735 122 132 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 6.5001E-07 175.93 By MS/MS 4.33 3.35 1 2 1 2 6 3269900 3269900 0 9719 135 10092;10093 24062;24063;24064;24065;24066;24067 19346;19347;19348;19349;19350 19350 78 4 317790 0 MIETAQVDER QNKGIEELFLDLCKRMIETAQVDERAKGNG DLCKRMIETAQVDERAKGNGSSQPGTARRG R M I E R A 1 1 0 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1190.5601 Q9UL25 Q9UL25 180 189 RAB21 Ras-related protein Rab-21 yes yes 2 0.00040585 134.84 By MS/MS 8.67 0.471 1 2 3 904430 904430 0 9720 2769 10094;10095 24068;24069;24070 19351;19352 19351 1166 2 16116 0 MIGEFVSDRK EVAQWLRENPRLDKKMIGEFVSDRKNIDLL RLDKKMIGEFVSDRKNIDLLESFVSTFSFQ K M I R K N 0 1 0 1 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 1 0 0 10 1 1180.591 Q92538 Q92538 750 759 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0024766 125.82 By MS/MS 2 0 1 1 310850 310850 0 9721 2050 10096 24071 19353 19353 991 1 105140 0 MIGFPSSAGSVSPR EIATYRSLLEGQDAKMIGFPSSAGSVSPRS KMIGFPSSAGSVSPRSTSVTTTSSASVTTT K M I P R S 1 1 0 0 0 0 0 2 0 1 0 0 1 1 2 4 0 0 0 1 0 0 14 0 1391.6867 CON__P13646-1;P13646 P13646 416 429 KRT13 Keratin, type I cytoskeletal 13 no no 2 0.03362 85.813 By MS/MS 1 0 1 1 68457 0 68457 + 9722 603;51 10097 24072 19354 19354 38 1 0 68457 MIIEEAKR KNSRAVTIFIRGGNKMIIEEAKRSLHDALC FIRGGNKMIIEEAKRSLHDALCVIRNLIRD K M I K R S 1 1 0 0 0 0 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 8 1 988.53755 P48643 P48643 393 400 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.051762 101.28 By MS/MS 6 0.816 1 1 1 3 14890000 14890000 0 9723 940 10098 24073;24074;24075 19355 19355 494 1 111290 0 MININILSVCK EYFLDVPDLDNVIKKMININILSVCKMTQL VIKKMININILSVCKMTQLVLPGMVERSKG K M I C K M 0 0 2 0 1 0 0 0 0 3 1 1 1 0 0 1 0 0 0 1 0 0 11 0 1303.6992 Q53GQ0 Q53GQ0 157 167 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 1.4347E-06 185.33 By MS/MS 8 0 2 2 416870 416870 0 9724 1587 10099;10100 24076;24077 19356;19357 19356 883 2 5263 0 MINLSVPDTIDER DDLFKAVGDGIVLCKMINLSVPDTIDERAI CKMINLSVPDTIDERAINKKKLTPFIIQEN K M I E R A 0 1 1 2 0 0 1 0 0 2 1 0 1 0 1 1 1 0 0 1 0 0 13 0 1501.7446 P13797;P13796 P13797 169 181 PLS3;LCP1 Plastin-3;Plastin-2 yes no 2 0.0026772 136.5 By MS/MS 5 0 1 1 657830 657830 0 9725 605 10101 24078 19358 19358 1 6597.7 0 MIQDGKGDVTITNDGATILK ADAIRTSLGPKGMDKMIQDGKGDVTITNDG KGDVTITNDGATILKQMQVLHPAARMLVEL K M I L K Q 1 0 1 3 0 1 0 3 0 3 1 2 1 0 0 0 3 0 0 1 0 0 20 1 2089.0725 P50991 P50991 60 79 CCT4 T-complex protein 1 subunit delta yes yes 2;3 7.9385E-11 236.75 By MS/MS 6 0 3 3 14679000 14679000 0 9726 985 10102;10103 24079;24080;24081 19359;19360;19361 19360 542 3 100910 0 MIQVYFPK PSGTLRKASWEERDRMIQVYFPKEGRKILT SWEERDRMIQVYFPKEGRKILTPIIFKEEN R M I P K E 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 0 0 1 1 0 0 8 0 1024.5416 P82650 P82650 192 199 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.0040234 129.4 By MS/MS 7 0 2 2 7310800 7310800 0 9727 1229 10104;10105 24082;24083 19362;19363 19362 739 2 114770 0 MISDAIPELK EKNLGIGKVSSFEEKMISDAIPELKASIKK SFEEKMISDAIPELKASIKKGEDFVKTLK_ K M I L K A 1 0 0 1 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 10 0 1115.5896 P40926 P40926 315 324 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.038026 78.113 By MS/MS 8 0 1 1 513460 513460 0 9728 862 10106 24084 19364 19364 1 6482.4 0 MIVDPVEPHGEMK LSKKLIYFQLHRALKMIVDPVEPHGEMKFQ LKMIVDPVEPHGEMKFQWDLNAWTKSAEAF K M I M K F 0 0 0 1 0 0 2 1 1 1 0 1 2 0 2 0 0 0 0 2 0 0 13 0 1480.7054 Q13263 Q13263 378 390 TRIM28 Transcription intermediary factor 1-beta yes yes 3 0.0034422 106.49 By MS/MS 4 0 1 1 787760 787760 0 9729 1367 10107 24085 19365 19365 1 74134 0 MKEIAEAYLGK KSFYPEEVSSMVLTKMKEIAEAYLGKTVTN VLTKMKEIAEAYLGKTVTNAVVTVPAYFND K M K G K T 2 0 0 0 0 0 2 1 0 1 1 2 1 0 0 0 0 0 1 0 0 0 11 1 1251.6533 P11142 P11142 127 137 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 7.2716E-05 152.69 By MS/MS By MS/MS 6.11 1.45 5 1 1 1 1 7 2 52846000 52742000 104230 9730 572 10108;10109 24086;24087;24088;24089;24090;24091;24092;24093;24094 19366;19367;19368;19369;19370 19369 259 5 530600 87530 MKETAEAYLGK KTFAPEEISAMVLTKMKETAEAYLGKKVTH VLTKMKETAEAYLGKKVTHAVVTVPAYFND K M K G K K 2 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 1 0 1 0 0 0 11 1 1239.6169 P11021 P11021 153 163 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.0045718 119.03 By MS/MS 5 0 2 2 2358300 2358300 0 9731 571 10110;10111 24095;24096 19371;19372 19371 254 2 23653 0 MKETAEAYLGKK KTFAPEEISAMVLTKMKETAEAYLGKKVTH LTKMKETAEAYLGKKVTHAVVTVPAYFNDA K M K K K V 2 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 1 0 1 0 0 0 12 2 1367.7119 P11021 P11021 153 164 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0036742 110.15 By MS/MS 5 0 1 1 3349700 3349700 0 9732 571 10112 24097 19373 19373 254 1 33596 0 MKETAENYLGHTAK KLYSPSQIGAFVLMKMKETAENYLGHTAKN KMKETAENYLGHTAKNAVITVPAYFNDSQR K M K A K N 2 0 1 0 0 0 2 1 1 0 1 2 1 0 0 0 2 0 1 0 0 0 14 1 1591.7664 P38646 P38646 174 187 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3;4 4.2681E-32 302.87 By MS/MS By matching 5.38 0.696 6 1 1 7 1 20610000 20561000 49122 9733 850 10113;10114 24098;24099;24100;24101;24102;24103;24104;24105 19374;19375;19376;19377;19378 19378 436 5 203750 41252 MKHYEVEILDAK ______________________________ ______________________________ - M K A K T 1 0 0 1 0 0 2 0 1 1 1 2 1 0 0 0 0 0 1 1 0 0 12 1 1474.749 Q9NZ01 Q9NZ01 1 12 TECR Very-long-chain enoyl-CoA reductase yes yes 3 0.0024707 109.16 By MS/MS 1.5 0.5 1 1 2 1271400 1271400 0 9734 2642 10115 24106;24107 19379;19380 19380 1126 2 383150 0 MKIEEVKSTTK ______________________________ ______________________________ - M K T K T 0 0 0 0 0 0 2 0 0 1 0 3 1 0 0 1 2 0 0 1 0 0 11 2 1292.701 Q9Y265 Q9Y265 1 11 RUVBL1 RuvB-like 1 yes yes 3 0.02625 80.014 By MS/MS 6 0 1 1 1805200 1805200 0 9735 2815 10116 24108 19381 19381 1 12409 0 MKLDYILGLK LLRRLVRIGVLDEGKMKLDYILGLKIEDFL LDEGKMKLDYILGLKIEDFLERRLQTQVFK K M K L K I 0 0 0 1 0 0 0 1 0 1 3 2 1 0 0 0 0 0 1 0 0 0 10 1 1192.689 P46781 P46781 92 101 RPS9 40S ribosomal protein S9 yes yes 3 0.031988 77.192 By MS/MS 9 0 1 1 240500 240500 0 9736 918 10117 24109 19382 19382 479 1 4733.1 0 MKLNISFPATGCQK ______________________________ ______________________________ - M K Q K L 1 0 1 0 1 1 0 1 0 1 1 2 1 1 1 1 1 0 0 0 0 0 14 1 1593.8007 P62753 P62753 1 14 RPS6 40S ribosomal protein S6 yes yes 2 0.026773 136.01 By MS/MS 8 0 1 1 3182600 3182600 0 9737 1169 10118 24110 19383 19383 667 1 40180 0 MKPILLQGHER ______________________________ ______________________________ - M K E R S 0 1 0 0 0 1 1 1 1 1 2 1 1 0 1 0 0 0 0 0 0 0 11 1 1320.7336 Q13347 Q13347 1 11 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 3 0.0015983 111.86 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 22641000 22603000 37811 9738 1372 10119 24111;24112;24113;24114;24115 19384;19385;19386;19387 19384 800 4 407890 68096 MKPTGTDPR ______________________________ ______________________________ - M K P R I 0 1 0 1 0 0 0 1 0 0 0 1 1 0 2 0 2 0 0 0 0 0 9 1 1001.4964 Q15051 Q15051 1 9 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.032859 73.248 By MS/MS 6 0 1 1 712420 712420 0 9739 1482 10120 24116 19388 19388 866 0 4897.3 0 MKQDAQVVLYR VAEQKREKEIKSELKMKQDAQVVLYRSYRH SELKMKQDAQVVLYRSYRHGDLPDIQIKHS K M K Y R S 1 1 0 1 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1 2 0 0 11 1 1349.7126 P78527 P78527 2763 2773 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0055703 126.71 By MS/MS 1.5 0.5 2 2 4 1322100 1322100 0 9740 1225 10121 24117;24118;24119;24120 19389;19390 19389 726 2 378920 0 MKQEPVKPEEGR KDLRNDEHTRRELAKMKQEPVKPEEGRDMA LAKMKQEPVKPEEGRDMANRIGAFGYMECS K M K G R D 0 1 0 0 0 1 3 1 0 0 0 2 1 0 2 0 0 0 0 1 0 0 12 2 1426.7238 P61586 P61586 134 145 RHOA Transforming protein RhoA yes yes 2;3 0.00060558 130.56 By MS/MS 9 0 2 2 1552200 1552200 0 9741 1125 10122 24121;24122 19391;19392 19391 1 30547 0 MKVELCSFSGYK ______________________________ ______________________________ - M K Y K I 0 0 0 0 1 0 1 1 0 0 1 2 1 1 0 2 0 0 1 1 0 0 12 1 1447.684 P83731 P83731 1 12 RPL24 60S ribosomal protein L24 yes yes 2 0.012381 151.26 By MS/MS 9 0 1 1 1428600 1428600 0 9742 1241 10123 24123 19393 19393 748 1 28116 0 MKVQDQDLPNTPHSK VTEVEENRIDVEILRMKVQDQDLPNTPHSK MKVQDQDLPNTPHSKAVYKILQGNENGNFI R M K S K A 0 0 1 2 0 2 0 0 1 0 1 2 1 0 2 1 1 0 0 1 0 0 15 1 1736.8516 Q08554 Q08554 375 389 DSC1 Desmocollin-1 yes yes 3;4 4.5527E-06 160.46 By MS/MS 3 0.632 1 3 1 5 2448900 0 2448900 9743 1311 10124;10125 24124;24125;24126;24127;24128 19394;19395;19396;19397 19395 782 4 0 626120 MLAEVLGGINCVK KGIGGMDGTQQQIFKMLAEVLGGINCVKAS FKMLAEVLGGINCVKASVLTPYYHKVDFEC K M L V K A 1 0 1 0 1 0 1 2 0 1 2 1 1 0 0 0 0 0 0 2 0 0 13 0 1402.7312 Q53R41 Q53R41 706 718 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.0002393 157.78 By MS/MS 5 0 1 1 500260 500260 0 9744 1591 10126 24129 19398 19398 886 1 5017.4 0 MLAIYDGFDGFAK AVRSAVRVGIADGHRMLAIYDGFDGFAKGQ HRMLAIYDGFDGFAKGQIKEIGWTDVGGWT R M L A K G 2 0 0 2 0 0 0 2 0 1 1 1 1 2 0 0 0 0 1 0 0 0 13 0 1446.6853 Q01813 Q01813 443 455 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.00043399 136.96 By MS/MS 5 0 1 1 218390 218390 0 9745 1271 10127 24130 19399 19399 759 1 2190.4 0 MLALALLDR EVVCRDACDGHEIGRMLALALLDRIVSVDK GHEIGRMLALALLDRIVSVDKQQQWLLYLS R M L D R I 2 1 0 1 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 9 0 1014.5896 Q92621 Q92621 1494 1502 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0020903 123.72 By MS/MS 2 0 2 2 297290 297290 0 9746 2065 10128;10129 24131;24132 19400;19401 19400 1002 2 100560 0 MLAMPIDLDTLSPEER QDGSTIHIRYREPRRMLAMPIDLDTLSPEE LAMPIDLDTLSPEERRARLRKREAQLQSRK R M L E R R 1 1 0 2 0 0 2 0 0 1 3 0 2 0 2 1 1 0 0 0 0 0 16 0 1829.8903 Q7Z7F7 Q7Z7F7 74 89 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 2 0.00013285 136.38 By MS/MS 10 0 1 1 112830 112830 0 9747 1805 10130 24133 19402 19402 943;944 1 6081.1 0 MLANLQNISLQNNR LHTNALQDLDGNVFRMLANLQNISLQNNRL RMLANLQNISLQNNRLRQLPGNIFANVNGL R M L N R L 1 1 4 0 0 2 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 14 0 1627.8464 Q8TF66 Q8TF66 363 376 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 1.525E-29 268.91 By MS/MS 10 0 1 1 107840 0 107840 9748 2008 10131 24134 19403 19403 974 1 0 138070 MLAQQAVK YLAILGSVTFLAGNRMLAQQAVKRTAH___ TFLAGNRMLAQQAVKRTAH___________ R M L V K R 2 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 8 0 887.48987 P04844 P04844 620 627 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.005716 121.29 By MS/MS 1.5 0.5 1 1 2 651250 651250 0 9749 479 10132 24135;24136 19404 19404 182 1 190070 0 MLATLEPEQR PTVEQQGEMARSGGRMLATLEPEQRAEIIH RSGGRMLATLEPEQRAEIIHHLADLLTDQR R M L Q R A 1 1 0 0 0 1 2 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 10 0 1186.6016 P54886 P54886 376 385 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 2.497E-05 168.26 By MS/MS By MS/MS 5 0 3 2 1 8398000 8325000 73020 9750 1048 10133;10134 24137;24138;24139 19405;19406;19407 19407 582 3 83496 61321 MLDEGMMLEGFRR MSPFGKRRKTASSRKMLDEGMMLEGFRRFD RKMLDEGMMLEGFRRFDLYEDCKDAACQFS K M L R R F 0 2 0 1 0 0 2 2 0 0 2 0 3 1 0 0 0 0 0 0 0 0 13 1 1583.7258 Q86V15 Q86V15 1424 1436 CASZ1 Zinc finger protein castor homolog 1 yes yes 3 0.049851 47.991 By MS/MS 9 0 1 1 278540 278540 0 9751 1826 10135 24140 19408 19408 947;948 1 5481.7 0 MLDFFTIFSK ______________________________ ______________________________ - M L S K G 0 0 0 1 0 0 0 0 0 1 1 1 1 3 0 1 1 0 0 0 0 0 10 0 1247.626 P08240 P08240 1 10 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0061126 102.62 By MS/MS 5 0 1 1 21526 21526 0 9752 522 10136 24141 19409 19409 224 1 215.89 0 MLDMGFEPQIR GLDFCKYLVLDEADRMLDMGFEPQIRRIVE EADRMLDMGFEPQIRRIVEQDTMPPKGVRH R M L I R R 0 1 0 1 0 1 1 1 0 1 1 0 2 1 1 0 0 0 0 0 0 0 11 0 1335.6315 O00571;O15523;P17844;Q92841 O00571 352 362 DDX3X;DDX3Y;DDX5;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.00048125 130.94 By MS/MS By matching 5 0 5 4 1 6904300 6816900 87394 9753 116;646;2073 10137;10138;10139 24142;24143;24144;24145;24146 19410;19411;19412;19413;19414 19410 72;73 5 68370 73393 MLDNDSILVDAIR EKHRYHVRMLETILRMLDNDSILVDAIRKI LRMLDNDSILVDAIRKIKDDVEYYVDSSQD R M L I R K 1 1 1 3 0 0 0 0 0 2 2 0 1 0 0 1 0 0 0 1 0 0 13 0 1473.7497 O75175 O75175 189 201 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 2 2.1066E-08 223.08 By MS/MS 4 0 2 2 544540 544540 0 9754 303 10140;10141 24147;24148 19415;19416 19415 129 2 51245 0 MLEDRDLFVMR LEREKALEHKNRMSRMLEDRDLFVMRLKAA RMSRMLEDRDLFVMRLKAARQSVYEEKLKQ R M L M R L 0 2 0 2 0 0 1 0 0 0 2 0 2 1 0 0 0 0 0 1 0 0 11 1 1423.6952 Q14152 Q14152 753 763 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0008004 121.6 By MS/MS 3 0.707 2 4 2 8 3694100 3694100 0 9755 1422 10142;10143;10144 24149;24150;24151;24152;24153;24154;24155;24156 19417;19418;19419;19420 19418 821;822 4 218940 0 MLEIDPQK EVNEAFSLVVLANIKMLEIDPQKVNINGGA VVLANIKMLEIDPQKVNINGGAVSLGHPIG K M L Q K V 0 0 0 1 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 8 0 972.49502 P24752 P24752 366 373 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.050742 81.548 By MS/MS 7 0 1 1 2287100 2287100 0 9756 716 10145 24157 19421 19421 356 1 35904 0 MLEILEGK NMQKMLPEIDQNKDRMLEILEGKGLSFLFP IDQNKDRMLEILEGKGLSFLFPLLKLEKEL R M L G K G 0 0 0 0 0 0 2 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 8 0 931.50485 P78344 P78344 715 722 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0068926 116.73 By MS/MS 4.33 0.471 2 1 3 2848300 2848300 0 9757 1219 10146;10147 24158;24159;24160 19422;19423 19423 706 2 258180 0 MLFDYLADK DPETTRQMQSTRDGRMLFDYLADKHGFRQE STRDGRMLFDYLADKHGFRQEYLDTLYRYA R M L D K H 1 0 0 2 0 0 0 0 0 0 2 1 1 1 0 0 0 0 1 0 0 0 9 0 1114.5369 P60228 P60228 112 120 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0057261 107.57 By MS/MS By matching 7.11 0.994 3 3 2 1 8 1 19214000 19188000 25853 9758 1090 10148;10149 24161;24162;24163;24164;24165;24166;24167;24168;24169 19424;19425;19426;19427 19425 610 4 146260 26492 MLGEALSK RQKIVQAEGEAEAAKMLGEALSKNPGYIKL GEAEAAKMLGEALSKNPGYIKLRKIRAAQN K M L S K N 1 0 0 0 0 0 1 1 0 0 2 1 1 0 0 1 0 0 0 0 0 0 8 0 847.44734 Q99623 Q99623 237 244 PHB2 Prohibitin-2 yes yes 2 0.0034622 132.08 By MS/MS 7.5 0.5 1 1 2 3795400 3795400 0 9759 2254 10150 24170;24171 19428;19429 19428 1048 2 53199 0 MLGEALSKNPGYIK RQKIVQAEGEAEAAKMLGEALSKNPGYIKL KMLGEALSKNPGYIKLRKIRAAQNISKTIA K M L I K L 1 0 1 0 0 0 1 2 0 1 2 2 1 0 1 1 0 0 1 0 0 0 14 1 1519.8068 Q99623 Q99623 237 250 PHB2 Prohibitin-2 yes yes 2;3 1.8603E-05 211.63 By MS/MS 7.5 0.5 2 2 4 24313000 24313000 0 9760 2254 10151 24172;24173;24174;24175 19430;19431;19432 19431 1048 3 343410 0 MLGETCADCGTILLQDK RISRLMGDYLLRGYRMLGETCADCGTILLQ GETCADCGTILLQDKQRKIYCVACQELDSD R M L D K Q 1 0 0 2 2 1 1 2 0 1 3 1 1 0 0 0 2 0 0 0 0 0 17 0 1923.874 O60232 O60232 48 64 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 3.4396E-17 265.77 By MS/MS 9 0 2 2 2194500 2194500 0 9761 250 10152;10153 24176;24177 19433;19434 19433 113 2 43189 0 MLGHLVSNAPR LEHSGIGRIKEQSARMLGHLVSNAPRLIRP QSARMLGHLVSNAPRLIRPYMEPILKALIL R M L P R L 1 1 1 0 0 0 0 1 1 0 2 0 1 0 1 1 0 0 0 1 0 0 11 0 1193.6339 P42345 P42345 756 766 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.027325 81.338 By MS/MS 2 0 1 1 63610 63610 0 9762 879 10154 24178 19435 19435 462 1 21516 0 MLGSLASIIPER VIHSNDPVARAITLRMLGSLASIIPERKNA TLRMLGSLASIIPERKNAHHSIRQSLDSHD R M L E R K 1 1 0 0 0 0 1 1 0 2 2 0 1 0 1 2 0 0 0 0 0 0 12 0 1285.7064 Q9NVH2 Q9NVH2 125 136 INTS7 Integrator complex subunit 7 yes yes 2 0.045912 74.841 By MS/MS 4 0 1 1 0 0 0 9763 2596 10155 24179 19436 19436 1118 1 0 0 MLLDSEQHPCQLK LAIQLGAQALLGAAKMLLDSEQHPCQLKDN AKMLLDSEQHPCQLKDNVCSPGGATIHALH K M L L K D 0 0 0 1 1 2 1 0 1 0 3 1 1 0 1 1 0 0 0 0 0 0 13 0 1597.7592 Q96C36 Q96C36 216 228 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 0.00031256 149.94 By MS/MS 7.67 0.471 1 2 3 2069800 2069800 0 9764 2120 10156 24180;24181;24182 19437;19438 19438 1016 2 26941 0 MLLDSVLTTHER TKTIEVLQLQDQGSKMLLDSVLTTHERVVQ GSKMLLDSVLTTHERVVQISGLSATFAEIF K M L E R V 0 1 0 1 0 0 1 0 1 0 3 0 1 0 0 1 2 0 0 1 0 0 12 0 1413.7286 Q96GC5 Q96GC5 144 155 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2;3 3.1591E-06 181.53 By MS/MS 9 0 4 4 4408300 4408300 0 9765 2158 10157;10158 24183;24184;24185;24186 19439;19440;19441;19442;19443 19443 1022 5 86756 0 MLLHSEQHPGQLK LAVRLGAQALLGAAKMLLHSEQHPGQLKDN AKMLLHSEQHPGQLKDNVSSPGGATIHALH K M L L K D 0 0 0 0 0 2 1 1 2 0 3 1 1 0 1 1 0 0 0 0 0 0 13 0 1516.782 P32322 P32322 216 228 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.0060086 93.839 By MS/MS 8 0 1 1 2479100 2479100 0 9766 797 10159 24187 19444 19444 394 1 31299 0 MLLQSSEGR TGSGKTICAEFAILRMLLQSSEGRCVYITP EFAILRMLLQSSEGRCVYITPMEALAEQVY R M L G R C 0 1 0 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 0 0 0 0 9 0 1019.507 O75643 O75643 1367 1375 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.002505 114.89 By MS/MS 2.33 0.471 2 1 3 911040 911040 0 9767 340 10160;10161 24188;24189;24190 19445;19446 19446 141 2 211630 0 MLLVDELR NDRERIQEVADELQKMLLVDELRDAVLLLF VADELQKMLLVDELRDAVLLLFANKQDLPN K M L L R D 0 1 0 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 1 0 0 8 0 987.5423 P18085 P18085 110 117 ARF4 ADP-ribosylation factor 4 yes yes 2 0.0056478 121.62 By MS/MS 9.33 0.471 2 1 3 1289300 1289300 0 9768 651 10162;10163 24191;24192;24193 19447;19448 19447 325 2 36907 0 MLNGLEDSIGLSK LAMKGDVENIEVVQKMLNGLEDSIGLSKMV QKMLNGLEDSIGLSKMVFINNIALAQIKNN K M L S K M 0 0 1 1 0 0 1 2 0 1 3 1 1 0 0 2 0 0 0 0 0 0 13 0 1375.7017 P42704 P42704 1164 1176 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.2113E-07 210.44 By MS/MS By matching 3.67 0.745 3 2 1 5 1 2192600 2094700 97829 9769 886 10164;10165 24194;24195;24196;24197;24198;24199 19449;19450;19451 19449 471 2 116530 12452 MLPPEELVPYYTDAK KPVPFFLRGQPIPKRMLPPEELVPYYTDAK MLPPEELVPYYTDAKNRGYLADPAKFPEAR R M L A K N 1 0 0 1 0 0 2 0 0 0 2 1 1 0 3 0 1 0 2 1 0 0 15 0 1764.8644 Q9P015 Q9P015 204 218 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.0087513 91.914 By MS/MS 8 0 2 2 1490800 1490800 0 9770 2659 10166;10167 24200;24201 19452;19453 19452 1129 2 18821 0 MLPTFVR EKGLGATTHPTAAVKMLPTFVRSTPDGTEH THPTAAVKMLPTFVRSTPDGTEHGEFLALD K M L V R S 0 1 0 0 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 0 0 7 0 862.47349 P52789;P52790;Q2TB90;P19367 P52789 63 69 HK2;HK3;HKDC1;HK1 Hexokinase-2;Hexokinase-3;Putative hexokinase HKDC1;Hexokinase-1 no no 2 0.042804 94.006 By MS/MS 4 0 1 1 1279000 1279000 0 9771 1023;660 10168 24202 19454 19454 332 1 120370 0 MLQIPNR VLAPRYKDQTGGYTRMLQIPNRSLDRAKMA DQTGGYTRMLQIPNRSLDRAKMAVIEYKGN R M L N R S 0 1 1 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 7 0 870.47456 Q9NRX2 Q9NRX2 107 113 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.050205 89.673 By MS/MS 9.5 0.5 1 1 2 1568000 1568000 0 9772 2561 10169 24203;24204 19455 19455 1110 1 34181 0 MLQPCGPPADKPEEN ENESKARVRFNLMEKMLQPCGPPADKPEEN MLQPCGPPADKPEEN_______________ K M L E N - 1 0 1 1 1 1 2 1 0 0 1 1 1 0 4 0 0 0 0 0 0 0 15 1 1681.744 Q9BWJ5 Q9BWJ5 72 86 SF3B5 Splicing factor 3B subunit 5 yes yes 2 0.0015746 171.49 By MS/MS 10 0 2 2 876840 876840 0 9773 2350 10170;10171 24205;24206 19456;19457 19457 1076 2 47259 0 MLQSIIK ______________________________ ______________________________ - M L I K N 0 0 0 0 0 1 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 7 0 831.48881 P56378 P56378 1 7 MP68 6.8 kDa mitochondrial proteolipid yes yes 2 0.016184 117.93 By MS/MS 10 0 1 1 501470 501470 0 9774 1070 10172 24207 19458 19458 601 1 27027 0 MLQTPESRGLPVPQAEGEK ______________________________ PESRGLPVPQAEGEKDGGHDGETRAPTASQ - M L E K D 1 1 0 0 0 2 3 2 0 0 2 1 1 0 3 1 1 0 0 1 0 0 19 1 2066.0466 Q9HAY2 Q9HAY2 1 19 MAGEF1 Melanoma-associated antigen F1 yes yes 2;3 0.012152 63.691 By MS/MS 8.8 0.748 2 2 1 5 4326100 4326100 0 9775 2498 10173 24208;24209;24210;24211;24212 19459;19460;19461 19459 3 73949 0 MLSLLVVDVGNPEEVR AWMECCCVSSGISERMLSLLVVDVGNPEEV LSLLVVDVGNPEEVRLFSKGFLVALVQVMP R M L V R L 0 1 1 1 0 0 2 1 0 0 3 0 1 0 1 1 0 0 0 4 0 0 16 0 1768.9393 P57678 P57678 832 847 GEMIN4 Gem-associated protein 4 yes yes 2 0.00046156 131.32 By MS/MS 4 0 1 1 118810 118810 0 9776 1079 10174 24213 19462 19462 603 1 11181 0 MLSSGVCTSTVQLPGK LLPFLLYMAAPQIRKMLSSGVCTSTVQLPG LSSGVCTSTVQLPGKVVVVTGANTGIGKET K M L G K V 0 0 0 0 1 1 0 2 0 0 2 1 1 0 1 3 2 0 0 2 0 0 16 0 1663.8273 Q8TC12 Q8TC12 27 42 RDH11 Retinol dehydrogenase 11 yes yes 2 1.7988E-07 220.53 By MS/MS 8 0 1 1 1953500 1953500 0 9777 1988 10175 24214 19463 19463 968 1 24663 0 MLTEAIMHDCVVK SLGNIKFIGELFKLKMLTEAIMHDCVVKLL LKMLTEAIMHDCVVKLLKNHDEESLECLCR K M L V K L 1 0 0 1 1 0 1 0 1 1 1 1 2 0 0 0 1 0 0 2 0 0 13 0 1545.7353 Q04637;O43432 Q04637 910 922 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 0.00011785 169.58 By MS/MS 2.29 0.452 5 2 7 7527500 7527500 0 9778 1291;210 10176;10177;10178 24215;24216;24217;24218;24219;24220;24221 19464;19465;19466;19467;19468 19464 106;107 5 2511300 0 MLVDDIGDVTITNDGATILK ANIVKSSLGPVGLDKMLVDDIGDVTITNDG IGDVTITNDGATILKLLEVEHPAAKVLCEL K M L L K L 1 0 1 4 0 0 0 2 0 3 2 1 1 0 0 0 3 0 0 2 0 0 20 0 2103.0769 P17987 P17987 44 63 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.5325E-74 377.85 By MS/MS 6 0 2 2 5390800 5390800 0 9779 648 10179;10180 24222;24223 19469;19470 19469 318 2 37058 0 MLVIEQCK AGLVQEISFGTTKDKMLVIEQCKNSRAVTI FGTTKDKMLVIEQCKNSRAVTIFIRGGNKM K M L C K N 0 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 1019.5144 P48643 P48643 371 378 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.024009 94.302 By MS/MS 6.5 0.5 2 2 4 30369000 30369000 0 9780 940 10181;10182 24224;24225;24226;24227 19471;19472 19471 495 2 216470 0 MLVSGAGDIK QDVLRTNLGPKGTMKMLVSGAGDIKLTKDG KGTMKMLVSGAGDIKLTKDGNVLLHEMQIQ K M L I K L 1 0 0 1 0 0 0 2 0 1 1 1 1 0 0 1 0 0 0 1 0 0 10 0 989.52157 P40227;Q92526 P40227 46 55 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 7.5662E-05 155.58 By MS/MS By matching 6.17 0.687 1 3 2 5 1 42024000 41936000 88009 9781 858 10183;10184 24228;24229;24230;24231;24232;24233 19473;19474;19475;19476 19475 442 4 321410 90184 MLVSGQGPVMENAQGLGFR SHSPMKLFSEYHEKRMLVSGQGPVMENAQG GQGPVMENAQGLGFRNVVTVDELRMAFPLL R M L F R N 1 1 1 0 0 2 1 4 0 0 2 0 2 1 1 1 0 0 0 2 0 0 19 0 1989.9765 Q9BXW7 Q9BXW7 134 152 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 6.7456E-12 236.12 By MS/MS 7 0 1 1 2302800 2302800 0 9782 2361 10185 24234 19477 19477 1079;1080 1 36150 0 MLVVGGIDR DMNLYMRIAPELYHKMLVVGGIDRVYEIGR PELYHKMLVVGGIDRVYEIGRQFRNEGIDL K M L D R V 0 1 0 1 0 0 0 2 0 1 1 0 1 0 0 0 0 0 0 2 0 0 9 0 958.52699 Q15046 Q15046 306 314 KARS Lysine--tRNA ligase yes yes 2 0.048847 75.738 By MS/MS 5 0 2 2 1987100 1987100 0 9783 1481 10186;10187 24235;24236 19478;19479 19478 865 2 19929 0 MLYVWALCR PKGEVVEGDPDKVLRMLYVWALCRDQDELN PDKVLRMLYVWALCRDQDELNPYAAWRLLD R M L C R D 1 1 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 1 1 0 0 9 0 1210.5991 O43615 O43615 419 427 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00067855 140.53 By MS/MS 7 0 1 1 119490 119490 0 9784 221 10188 24237 19480 19480 110 1 1875.8 0 MMEELEKK SMQGKLSKEKLTTQKMMEELEKKERNVQRL EKLTTQKMMEELEKKERNVQRLTKALLENQ K M M K K E 0 0 0 0 0 0 3 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 8 1 1036.4933 Q5SZL2 Q5SZL2 654 661 CEP85L Centrosomal protein of 85 kDa-like yes yes 2 0.048901 56.011 By MS/MS 10 0 1 1 364210 364210 0 9785 1626 10189 24238 19481 19481 890;891 1 19629 0 MMGHRPVLVLSQNTK ______________________________ MMGHRPVLVLSQNTKRESGRKVQSGNINAA - M M T K R 0 1 1 0 0 1 0 1 1 0 2 1 2 0 1 1 1 0 0 2 0 0 15 1 1709.9069 P49368 P49368 1 15 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.0011814 105.99 By MS/MS 6 0.816 1 1 1 3 8724200 8724200 0 9786 947 10190 24239;24240;24241 19482 19482 517;518 1 84661 0 MMLEQERLR AKAKLITDLQDQNQKMMLEQERLRVEHEKL QDQNQKMMLEQERLRVEHEKLKATDQEKSR K M M L R V 0 2 0 0 0 1 2 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 9 1 1204.6056 P33176 P33176 740 748 KIF5B Kinesin-1 heavy chain yes yes 2 0.044388 61.679 By matching By MS/MS 6.8 1.17 1 1 1 2 1 4 2985700 893670 2092000 9787 800 10191 24242;24243;24244;24245;24246 19483 19483 397;398 1 11283 2793600 MMLGTEGGEGFVVK ______________________________ ______________________________ - M M V K V 0 0 0 0 0 0 2 4 0 0 1 1 2 1 0 0 1 0 0 2 0 0 14 0 1453.6945 P31943 P31943 1 14 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 2 0.00047174 139.31 By MS/MS 6 0 1 1 268480 268480 0 9788 791 10192 24247 19484 19484 1 1845.6 0 MMMQSGR VAGLTSYPFDTVRRRMMMQSGRKGTDIMYT PFDTVRRRMMMQSGRKGTDIMYTGTLDCWR R M M G R K 0 1 0 0 0 1 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 0 7 0 839.3452 P05141;P12235;P12236 P05141 238 244 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.047155 90.777 By MS/MS 1.5 0.5 1 1 2 563090 563090 0 9789 487;589;588 10193 24248;24249 19485 19485 190 1 181630 0 MMPTPVILLK ______________________________ ______________________________ - M M L K E 0 0 0 0 0 0 0 0 0 1 2 1 2 0 2 0 1 0 0 1 0 0 10 0 1141.6603 Q99832 Q99832 1 10 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00093011 111.95 By MS/MS By MS/MS 7.14 1.55 4 1 1 1 6 1 6403900 6323700 80214 9790 2270 10194;10195 24250;24251;24252;24253;24254;24255;24256 19486;19487;19488;19489;19490;19491;19492 19491 1056;1057 7 50712 82197 MMVLDKEDGVPMLSVQPK ______________________________ LDKEDGVPMLSVQPKGKQKGCAGCNRKIKD - M M P K G 0 0 0 2 0 1 1 1 0 0 2 2 3 0 2 1 0 0 0 3 0 0 18 1 2016.0094 P25800 P25800 1 18 LMO1 Rhombotin-1 yes yes 2 0.034076 48.568 By MS/MS By MS/MS 6.33 3.09 1 1 1 1 2 1021900 497860 524080 9791 728 10196 24257;24258;24259 19493;19494;19495 19495 363;364;365 3 168400 1009600 MNALNEVNK KMILRLLQISSFNGKMNALNEVNKVISSVS SSFNGKMNALNEVNKVISSVSYYTHRHGNP K M N N K V 1 0 3 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 9 0 1031.507 Q93008 Q93008 352 360 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.00054941 143.04 By MS/MS 2 0 3 3 435470 435470 0 9792 2085 10197;10198 24260;24261;24262 19496;19497;19498 19498 1007 3 147290 0 MNDIVKEFEDR DVSLIERGESFYQDRMNDIVKEFEDRGFVQ YQDRMNDIVKEFEDRGFVQVDDGRKIVFVP R M N D R G 0 1 1 2 0 0 2 0 0 1 0 1 1 1 0 0 0 0 0 1 0 0 11 1 1394.65 P54136 P54136 342 352 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 5.4627E-05 172.21 By MS/MS 4.75 0.433 1 3 4 6000900 6000900 0 9793 1043 10199;10200 24263;24264;24265;24266 19499;19500;19501;19502;19503 19502 578 5 73519 0 MNDTVTIR ______________________________ ______________________________ - M N I R T 0 1 1 1 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 1 0 0 8 0 948.46987 P62847 P62847 1 8 RPS24 40S ribosomal protein S24 yes yes 2 0.0062928 105.52 By MS/MS By matching 9.4 0.49 3 2 4 1 9485100 9435800 49269 9794 1175 10201;10202 24267;24268;24269;24270;24271 19504;19505;19506;19507 19504 679 4 239170 112350 MNEAFGDTK DVQSIIGLQRFFETRMNEAFGDTKFSAVLV RFFETRMNEAFGDTKFSAVLVEPPPMSLPG R M N T K F 1 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 9 0 1011.4331 Q13263 Q13263 796 804 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.002453 114.51 By MS/MS 4 0 2 2 1770100 1770100 0 9795 1367 10203;10204 24272;24273 19508;19509 19508 796 2 166580 0 MNIFGGFR RLKIMMQVHGSKSDKMNIFGGFRQMVKEGG HGSKSDKMNIFGGFRQMVKEGGIRSLWRGN K M N F R Q 0 1 1 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 0 0 8 0 940.45891 Q6NUK1 Q6NUK1 232 239 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.038236 86.472 By MS/MS 7 0 1 1 357780 357780 0 9796 1687 10205 24274 19510 19510 908 1 5616.5 0 MNLLPNIESPVTR ______________________________ ______________________________ - M N T R Q 0 1 2 0 0 0 1 0 0 1 2 0 1 0 2 1 1 0 0 1 0 0 13 0 1482.7864 P17980 P17980 1 13 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.010726 101.39 By MS/MS 6 0 1 1 137290 137290 0 9797 647 10206 24275 19511 19511 1 943.76 0 MNLSAIQDR RDLPNALDEKQLIEKMNLSAIQDREICCYS KQLIEKMNLSAIQDREICCYSISCKEKDNI K M N D R E 1 1 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 9 0 1046.5179 Q96BM9;Q9NVJ2 Q9NVJ2 147 155 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B no no 2 0.00054057 145.46 By MS/MS 9 0 2 2 1824700 1824700 0 9798 2599;2114 10207;10208 24276;24277 19512;19513 19513 1012 2 35911 0 MNPEKDFAPLTPNIVR ______________________________ NPEKDFAPLTPNIVRALNDKLYEKRKVAAL - M N V R A 1 1 2 1 0 0 1 0 0 1 1 1 1 1 3 0 1 0 0 1 0 0 16 1 1840.9506 Q08AM6 Q08AM6 1 16 VAC14 Protein VAC14 homolog yes yes 2 0.00028345 129.17 By MS/MS 4.33 0.471 2 1 3 1591100 1591100 0 9799 1316 10209;10210 24278;24279;24280 19514;19515 19514 783 2 128130 0 MNPEYDYLFK ______________________________ ______________________________ - M N F K L 0 0 1 1 0 0 1 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 10 0 1318.5904 Q9H0U4 Q9H0U4 1 10 RAB1B Ras-related protein Rab-1B yes yes 2 0.00016653 135.43 By MS/MS 8.5 0.5 1 1 2 604140 604140 0 9800 2416 10211 24281;24282 19516;19517 19517 1086 2 10686 0 MNQVEDEVFEEFCR IIQSREREMKDLKEKMNQVEDEVFEEFCRE KMNQVEDEVFEEFCREIGVRNIREFEEEKV K M N C R E 0 1 1 1 1 1 4 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 14 0 1830.7553 Q14683 Q14683 769 782 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00039477 136.3 By MS/MS 3 0 1 1 51157 51157 0 9801 1451 10212 24283 19518 19518 850 1 936.03 0 MNTVLSR ______________________________ ______________________________ - M N S R A 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 7 0 819.42727 P61009 P61009 1 7 SPCS3 Signal peptidase complex subunit 3 yes yes 2 0.029449 105.14 By MS/MS 9 0 1 1 395660 395660 0 9802 1103 10213 24284 19519 19519 1 7786.6 0 MNVFDTELK VGEATETALTCLVEKMNVFDTELKGLSKIE TCLVEKMNVFDTELKGLSKIERANACNSVI K M N L K G 0 0 1 1 0 0 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 9 0 1095.527 P16615 P16615 452 460 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.1244E-05 169.09 By MS/MS 2.78 1.31 2 2 2 2 1 9 5399300 5399300 0 9803 635 10214;10215 24285;24286;24287;24288;24289;24290;24291;24292;24293 19520;19521;19522;19523;19524 19521 311 5 918420 0 MNVFDTELKGLSK VGEATETALTCLVEKMNVFDTELKGLSKIE EKMNVFDTELKGLSKIERANACNSVIKQLM K M N S K I 0 0 1 1 0 0 1 1 0 0 2 2 1 1 0 1 1 0 0 1 0 0 13 1 1480.7596 P16615 P16615 452 464 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.0012795 115.34 By MS/MS 3 1.41 1 1 1 1 1 5 1605800 1605800 0 9804 635 10216 24294;24295;24296;24297;24298 19525;19526;19527 19526 311 3 208500 0 MNVGTAHSEVNPNTR ______________________________ MNVGTAHSEVNPNTRVMNSRGIWLSYVLAI - M N T R V 1 1 3 0 0 0 1 1 1 0 0 0 1 0 1 1 2 0 0 2 0 0 15 0 1625.758 Q8N138 Q8N138 1 15 ORMDL3 ORM1-like protein 3 yes yes 2 8.9516E-11 228.61 By MS/MS 9.5 0.5 2 2 4 1974800 1974800 0 9805 1900 10217;10218 24299;24300;24301;24302 19528;19529;19530 19528 960 3 87604 0 MNVGVAHSEVNPNTR ______________________________ MNVGVAHSEVNPNTRVMNSRGMWLTYALGV - M N T R V 1 1 3 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 3 0 0 15 0 1623.7787 Q9P0S3;Q53FV1 Q9P0S3 1 15 ORMDL1;ORMDL2 ORM1-like protein 1;ORM1-like protein 2 yes no 2 7.7193E-12 246.63 By MS/MS 9.67 0.471 1 2 3 4055800 4055800 0 9806 2669 10219;10220 24303;24304;24305 19531;19532 19532 1135 2 199730 0 MNVLADALK ______________________________ ______________________________ R M N L K S 2 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 973.52665 P62244 P62244 4 12 RPS15A 40S ribosomal protein S15a yes yes 2 0.00094065 134.77 By MS/MS By matching 9.75 0.433 1 3 3 1 13191000 13095000 96267 9807 1144 10221;10222 24306;24307;24308;24309 19533;19534;19535 19535 647 3 699740 123250 MPGELVLENR LLASNFPPLPGSSSRMPGELVLENRMSDVV GSSSRMPGELVLENRMSDVVKGVYKEKDNE R M P N R M 0 1 1 0 0 0 2 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 10 0 1156.591 Q71RC2 Q71RC2 494 503 LARP4 La-related protein 4 yes yes 2 0.037957 77.533 By MS/MS 4 0 1 1 960770 960770 0 9808 1750 10223 24310 19536 19536 924 1 90415 0 MPITRMR ______________________________ ______________________________ - M P M R M 0 2 0 0 0 0 0 0 0 1 0 0 2 0 1 0 1 0 0 0 0 0 7 1 903.47826 P10914 P10914 1 7 IRF1 Interferon regulatory factor 1 yes yes 2 0.050591 59.205 By MS/MS 10 0 1 1 162700 0 162700 9809 570 10224 24311 19537 19537 251 0 0 208300 MPPYTVVYFPVR ______________________________ ______________________________ - M P V R G 0 1 0 0 0 0 0 0 0 0 0 0 1 1 3 0 1 0 2 3 0 0 12 0 1467.7584 P09211 P09211 1 12 GSTP1 Glutathione S-transferase P yes yes 2 0.013432 88.496 By MS/MS 8 0 1 1 161700 161700 0 9810 534 10225 24312 19538 19538 236 1 2041.4 0 MPSLVVSGIMER ______________________________ ______________________________ - M P E R N 0 1 0 0 0 0 1 1 0 1 1 0 2 0 1 2 0 0 0 2 0 0 12 0 1317.6785 A1L020 A1L020 1 12 MEX3A RNA-binding protein MEX3A yes yes 2 0.054827 53.089 By MS/MS By matching 10 0 3 2 1 1361900 1313800 48110 9811 8 10226 24313;24314;24315 19539 19539 2 1 70811 61594 MPSMPTTSR TKPLSHFVSEPGPQKMPSMPTTSRQPSLLH EPGPQKMPSMPTTSRQPSLLHYLQQPTPTQ K M P S R Q 0 1 0 0 0 0 0 0 0 0 0 0 2 0 2 2 2 0 0 0 0 0 9 0 1006.4576 Q13495 Q13495 557 565 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 2 0.048253 50.127 By MS/MS 10 0 1 1 37032 0 37032 9812 1390 10227 24316 19540 19540 803;804 0 0 47411 MPVGSPLLR VKPIYKKGPRWNRVRMPVGSPLLRDNVCYS RWNRVRMPVGSPLLRDNVCYSRTPWKLYH_ R M P L R D 0 1 0 0 0 0 0 1 0 0 2 0 1 0 2 1 0 0 0 1 0 0 9 0 968.54772 Q9NVS2 Q9NVS2 174 182 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 0.046831 77.318 By MS/MS 9 0 1 1 1203100 1203100 0 9813 2602 10228 24317 19541 19541 1 23677 0 MPWDARR ______________________________ ______________________________ - M P R R P 1 2 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 7 1 930.4494 Q96BM1 Q96BM1 1 7 ANKRD9 Ankyrin repeat domain-containing protein 9 yes yes 2 0.048036 47.916 By MS/MS 7 0.816 1 1 1 3 7886100 7886100 0 9814 2113 10229 24318;24319;24320 19542 19542 1011 1 55929 0 MQDAENVAVPEAAEER ______________________________ QDAENVAVPEAAEERAEPGQQQPAAEPPPA - M Q E R A 4 1 1 1 0 1 4 0 0 0 0 0 1 0 1 0 0 0 0 2 0 0 16 0 1757.789 P55884 P55884 1 16 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.00030661 136.17 By MS/MS 4.5 0.5 1 1 2 6275400 6275400 0 9815 1065 10230 24321;24322 19543;19544 19543 2 509570 0 MQEENITR EPKVGIKTIKVYCQRMQEENITRALIVVQQ IKVYCQRMQEENITRALIVVQQGMTPSAKQ R M Q T R A 0 1 1 0 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 8 0 1019.4706 P19388 P19388 94 101 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 0.046928 83.647 By MS/MS 8 0 1 1 351980 351980 0 9816 661 10231 24323 19545 19545 1 4443.7 0 MQEHSDQVPVGNIPR LQTRGSRFIKFQEMKMQEHSDQVPVGNIPR MQEHSDQVPVGNIPRSITVLVEGENTRIAQ K M Q P R S 0 1 1 1 0 2 1 1 1 1 0 0 1 0 2 1 0 0 0 2 0 0 15 0 1705.8206 P33993 P33993 237 251 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 5.322E-05 145.6 By MS/MS 5 0 2 2 800030 800030 0 9817 808 10232 24324;24325 19546;19547 19547 400 2 8023.9 0 MQELALSEGALPR MKAIIEEGDKEIATKMQELALSEGALPRHL TKMQELALSEGALPRHLHTAMFTISSDQRM K M Q P R H 2 1 0 0 0 1 2 1 0 0 3 0 1 0 1 1 0 0 0 0 0 0 13 0 1413.7286 O75165 O75165 600 612 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00011416 171.62 By MS/MS 2 0 2 2 724890 724890 0 9818 302 10233;10234 24326;24327 19548;19549 19548 128 2 245190 0 MQEQQADLQR KHKIQLEQVQEWKSKMQEQQADLQRRLKEA EWKSKMQEQQADLQRRLKEARKEAKEALEA K M Q Q R R 1 1 0 1 0 4 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1245.5772 Q14203 Q14203 265 274 DCTN1 Dynactin subunit 1 yes yes 2 9.9063E-08 192.12 By MS/MS 3 0 2 2 674510 674510 0 9819 1432 10235;10236 24328;24329 19550;19551 19550 826 2 12342 0 MQGQSPPAPTR EKPALLSQIDAEFEKMQGQSPPAPTRGISK EFEKMQGQSPPAPTRGISKHSTSGTDEGED K M Q T R G 1 1 0 0 0 2 0 1 0 0 0 0 1 0 3 1 1 0 0 0 0 0 11 0 1168.5659 Q14008 Q14008 812 822 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 6.1438E-05 155.26 By MS/MS 2.5 0.5 2 2 4 1866400 1866400 0 9820 1417 10237;10238 24330;24331;24332;24333 19552;19553 19553 810 2 561120 0 MQHQGHSR FVLLNFAEMNKLWVRMQHQGHSRDREKRER MNKLWVRMQHQGHSRDREKRERERQELRIL R M Q S R D 0 1 0 0 0 2 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 8 0 979.44063 Q96QK1 Q96QK1 197 204 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0037639 131.22 By MS/MS 5.5 0.5 1 1 2 68902 68902 0 9821 2217 10239 24334;24335 19554;19555 19554 2 691.05 0 MQKEITALAPSTMK VLSGGTTMYPGIADRMQKEITALAPSTMKI RMQKEITALAPSTMKIKIIAPPERKYSVWI R M Q M K I 2 0 0 0 0 1 1 0 0 1 1 2 2 0 1 1 2 0 0 0 0 0 14 1 1547.8051 P60709;P63267;P68133;P68032;P62736;P63261 P63261 313 326 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 3 0.044663 59.248 By MS/MS 7 0 1 1 41165 0 41165 9822 1095;1203 10240 24336 19556 19556 616;618 1 0 74138 MQKGDPQVYEELFSYSCPK IHLQLREKYGDKMLRMQKGDPQVYEELFSY DPQVYEELFSYSCPKFLSPVVPNYDNVHPN R M Q P K F 0 0 0 1 1 2 2 1 0 0 1 2 1 1 2 2 0 0 2 1 0 0 19 1 2305.0395 Q9Y262 Q9Y262 401 419 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 9.993E-05 127.32 By MS/MS 5.5 0.5 2 2 4 6493900 6493900 0 9823 2814 10241;10242 24337;24338;24339;24340 19557;19558 19558 1180 2 56341 0 MQLLEIITTEK PEKVIGMHYFSPVDKMQLLEIITTEKTSKD PVDKMQLLEIITTEKTSKDTSASAVAVGLK K M Q E K T 0 0 0 0 0 1 2 0 0 2 2 1 1 0 0 0 2 0 0 0 0 0 11 0 1317.7214 P40939 P40939 506 516 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 6.0685E-06 187.42 By MS/MS 5.33 0.471 2 1 3 8637700 8637700 0 9824 865 10243;10244 24341;24342;24343 19559;19560 19560 451 2 84994 0 MQLSGEGAK GATVFVQPLDLVKNRMQLSGEGAKTREYKT DLVKNRMQLSGEGAKTREYKTSFHALTSIL R M Q A K T 1 0 0 0 0 1 1 2 0 0 1 1 1 0 0 1 0 0 0 0 0 0 9 0 919.44332 Q02978 Q02978 49 57 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.03764 81.296 By MS/MS 9 0.816 1 1 1 3 5826300 5826300 0 9825 1284 10245 24344;24345;24346 19561 19561 1 84415 0 MQLVCCR LVVMQIDSFPQYSPKMQLVCCRAIVKVFLA SFPQYSPKMQLVCCRAIVKVFLALAAKGPV K M Q C R A 0 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 7 0 965.42451 P78527 P78527 453 459 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.029363 105.2 By MS/MS 1.5 0.5 1 1 2 446760 446760 0 9826 1225 10246 24347;24348 19562 19562 1 140970 0 MQNDAGEFVDLYVPR ______________________________ MQNDAGEFVDLYVPRKCSASNRIIGAKDHA - M Q P R K 1 1 1 2 0 1 1 1 0 0 1 0 1 1 1 0 0 0 1 2 0 0 15 0 1752.8141 P63220 P63220 1 15 RPS21 40S ribosomal protein S21 yes yes 2;3 0.0002312 161.76 By MS/MS By MS/MS 10 0 3 2 1 2831800 2678800 153020 9827 1200 10247 24349;24350;24351 19563;19564;19565 19564 697 3 144380 195910 MQNDAGEFVDLYVPRK ______________________________ QNDAGEFVDLYVPRKCSASNRIIGAKDHAS - M Q R K C 1 1 1 2 0 1 1 1 0 0 1 1 1 1 1 0 0 0 1 2 0 0 16 1 1880.9091 P63220 P63220 1 16 RPS21 40S ribosomal protein S21 yes yes 2 3.2131E-06 155.09 By MS/MS By MS/MS 10 0 4 3 1 6268600 6136500 132040 9828 1200 10248;10249 24352;24353;24354;24355 19566;19567;19568;19569;19570;19571 19566 697 5 330740 169040 MQNDVKLPQGQR AGGFVGTPADLVNVRMQNDVKLPQGQRRNY NVRMQNDVKLPQGQRRNYAHALDGLYRVAR R M Q Q R R 0 1 1 1 0 3 0 1 0 0 1 1 1 0 1 0 0 0 0 1 0 0 12 1 1412.7194 Q9UBX3 Q9UBX3 127 138 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 3 0.0032684 103.08 By MS/MS 5.6 3.38 1 1 2 1 5 3077400 3077400 0 9829 2709 10250;10251 24356;24357;24358;24359;24360 19572;19573;19574 19574 1151 3 119650 0 MQSLSLNK EERKAKDDATLSGKRMQSLSLNK_______ ATLSGKRMQSLSLNK_______________ R M Q N K - 0 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 919.4797 Q13442 Q13442 174 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.033907 88.177 By MS/MS 8 0 1 1 427190 427190 0 9830 1386 10252 24361 19575 19575 802 1 5393.3 0 MQTPVNIPVPVLR ______________________________ ______________________________ - M Q L R L 0 1 1 0 0 1 0 0 0 1 1 0 1 0 3 0 1 0 0 3 0 0 13 0 1462.833 Q9H840 Q9H840 1 13 GEMIN7 Gem-associated protein 7 yes yes 2 0.00043694 125.74 By MS/MS 10 0 1 1 419310 419310 0 9831 2470 10253 24362 19576;19577 19576 1101 2 22599 0 MQVDPQKYK TTHTALVPLDLVKCRMQVDPQKYKGIFNGF DLVKCRMQVDPQKYKGIFNGFSVTLKEDGV R M Q Y K G 0 0 0 1 0 2 0 0 0 0 0 2 1 0 1 0 0 0 1 1 0 0 9 1 1135.5696 Q00325 Q00325 93 101 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 3 0.048928 83.998 By MS/MS 1.5 0.5 1 1 2 417020 417020 0 9832 1259 10254 24363;24364 19578 19578 1 130470 0 MRAAAISTPK ______________________________ ______________________________ - M R P K L 3 1 0 0 0 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 0 10 1 1044.575 Q08116 Q08116 1 10 RGS1 Regulator of G-protein signaling 1 yes yes 2 0.051072 42.287 By matching By MS/MS 4.57 1.92 1 1 1 1 2 1 2 5 7507400 2609400 4897900 9833 1305 10255 24365;24366;24367;24368;24369;24370;24371 19579 19579 777 0 21126 4774900 MREESGAR EVGSIIGKKGESVKKMREESGARINISEGN KGESVKKMREESGARINISEGNCPERIITL K M R A R I 1 2 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 8 1 934.42906 P57721;Q15366 Q15366 39 46 PCBP3;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 2 0.025063 137.9 By MS/MS 7 0 1 1 1443300 1443300 0 9834 1501;1080 10256 24372 19580 19580 1 22657 0 MREIVHLQAGQCGNQIGAK ______________________________ VHLQAGQCGNQIGAKFWEVISDEHGIDPTG - M R A K F 2 1 1 0 1 3 1 3 1 2 1 1 1 0 0 0 0 0 0 1 0 0 19 1 2109.0572 P04350;P68371 P68371 1 19 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain no no 2;3;4 0.00010665 178.67 By MS/MS 6 0 4 4 64511000 64511000 0 9835 1212;472 10257 24373;24374;24375;24376 19581;19582;19583;19584 19581 4 443460 0 MRGAARAAWGR ______________________________ ______________________________ - M R G R A 4 3 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 11 2 1201.6251 Q641Q3 Q641Q3 1 11 METRNL Meteorin-like protein yes yes 2 0.027755 61.679 By MS/MS 10 0 1 1 0 0 0 9836 1666 10258 24377 19585 19585 904 1 0 0 MRMLVSGRR ______________________________ ______________________________ - M R R R V 0 3 0 0 0 0 0 1 0 0 1 0 2 0 0 1 0 0 0 1 0 0 9 2 1104.6008 Q9BYG0 Q9BYG0 1 9 B3GNT5 Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase yes yes 3 0.042128 68.371 By matching By MS/MS 3.5 0.5 1 1 1 1 361540 137740 223810 9837 2372 10259 24378;24379 19586 19586 1083 0 12962 28487 MRPGVACSVSQAQK EIRNFLGEKYIRRVRMRPGVACSVSQAQKD RMRPGVACSVSQAQKDELILEGNDIELVSN R M R Q K D 2 1 0 0 1 2 0 1 0 0 0 1 1 0 1 2 0 0 0 2 0 0 14 1 1517.7443 P32969 P32969 128 141 RPL9 60S ribosomal protein L9 yes yes 3 0.0037709 104.81 By MS/MS 9 0 1 1 300050 300050 0 9838 798 10260 24380 19587 19587 395 1 5905.1 0 MRPQQAPVSGK ______________________________ ______________________________ - M R G K V 1 1 0 0 0 2 0 1 0 0 0 1 1 0 2 1 0 0 0 1 0 0 11 1 1197.6288 Q7Z5G4 Q7Z5G4 1 11 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.037445 48.998 By MS/MS 10 0 1 1 0 0 0 9839 1797 10261 24381 19588 19588 940 1 0 0 MRSPRTR ______________________________ ______________________________ - M R T R G 0 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 7 2 902.48685 P78504 P78504 1 7 JAG1 Protein jagged-1 yes yes 2 0.051337 44.531 By MS/MS 8 0 1 1 451820 451820 0 9840 1224 10262 24382 19589 19589 716 1 5704.2 0 MSAEINEIIR GIEEALKNRNFTVEKMSAEINEIIRVLQLT FTVEKMSAEINEIIRVLQLTSWDEDAWASK K M S I R V 1 1 1 0 0 0 2 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 10 0 1174.6016 P18206 P18206 237 246 VCL Vinculin yes yes 2 0.0014767 113.44 By MS/MS 3 0 1 1 247360 247360 0 9841 653 10263 24383 19590 19590 326 1 4526 0 MSDGLFLQK HRSNVTAVHKANIMRMSDGLFLQKCREVAE KANIMRMSDGLFLQKCREVAESCKDIKFNE R M S Q K C 0 0 0 1 0 1 0 1 0 0 2 1 1 1 0 1 0 0 0 0 0 0 9 0 1037.5216 P50213 P50213 206 214 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.00034743 151.04 By MS/MS 7 0 2 2 2092600 2092600 0 9842 971 10264;10265 24384;24385 19591;19592 19591 529 2 32849 0 MSEQQDLER LGFTVGRYLAKKKMRMSEQQDLERNADTLP AKKKMRMSEQQDLERNADTLPDQEELIQSA R M S E R N 0 1 0 1 0 2 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 9 0 1134.4975 Q5VYK3 Q5VYK3 771 779 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 5.713E-07 189.18 By MS/MS 2 0 2 2 1809100 1809100 0 9843 1656 10266;10267 24386;24387 19593;19594 19593 901 2 611910 0 MSGCDLGPDGR GYYNQSEDGSHTLQRMSGCDLGPDGRLLRG TLQRMSGCDLGPDGRLLRGYDQSAYDGKDY R M S G R L 0 1 0 2 1 0 0 3 0 0 1 0 1 0 1 1 0 0 0 0 0 0 11 0 1163.4699 P10321 P10321 122 132 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 0.0024122 110.54 By MS/MS 7 0 1 1 1041600 1041600 0 9844 558 10268 24388 19595 19595 244 1 16352 0 MSGECAPNVSVSVSTSHTTISGGGSR EIATYRTLLEGEESRMSGECAPNVSVSVST SVSTSHTTISGGGSRGGGGGGYGSGGSSYG R M S S R G 1 1 1 0 1 0 1 4 1 1 0 0 1 0 1 7 3 0 0 3 0 0 26 0 2564.1595 CON__P04264;P04264 P04264 493 518 KRT1 Keratin, type II cytoskeletal 1 no no 3 1.1608E-05 104.45 By MS/MS By MS/MS 3.5 1.71 1 1 1 1 1 1 1 5 1996000 1375700 620360 + 9845 471;45 10269 24389;24390;24391;24392;24393;24394 19596;19597;19598;19599;19600;19601;19602;19603 19601 29 8 9456.7 451420 MSGGASATGPRR ______________________________ ______________________________ - M S R R G 2 2 0 0 0 0 0 3 0 0 0 0 1 0 1 2 1 0 0 0 0 0 12 1 1146.5564 O94966 O94966 1 12 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.034879 55.084 By MS/MS 10 0 1 1 94091 94091 0 9846 379 10270 24395 19604 19604 0 5071.2 0 MSGGWMAQVGAWR ______________________________ ______________________________ - M S W R T 2 1 0 0 0 1 0 3 0 0 0 0 2 0 0 1 0 2 0 1 0 0 13 0 1435.6489 Q9NPF0 Q9NPF0 1 13 CD320 CD320 antigen yes yes 3 0.024202 69.261 By MS/MS 3 0 1 1 349040 0 349040 9847 2532 10271 24396 19605 19605 1108 1 0 44428 MSIMSYNGGAVMAMKGK ______________________________ IMSYNGGAVMAMKGKNCVAIAADRRFGIQA - M S G K N 2 0 1 0 0 0 0 3 0 1 0 2 4 0 0 2 0 0 1 1 0 0 17 1 1774.8238 P49720 P49720 1 17 PSMB3 Proteasome subunit beta type-3 yes yes 2 0.034332 61.815 By MS/MS 6 0 1 1 1311700 1311700 0 9848 956 10272 24397 19606 19606 527 1 9017.2 0 MSINAEEVVVGDLVEVK NMVPQQALVIRNGEKMSINAEEVVVGDLVE INAEEVVVGDLVEVKGGDRIPADLRIISAN K M S V K G 1 0 1 1 0 0 3 1 0 1 1 1 1 0 0 1 0 0 0 5 0 0 17 0 1829.9445 P05023 P05023 178 194 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 2.5178E-71 367.22 By MS/MS 2.57 1.18 2 1 2 2 7 1290300 1290300 0 9849 481 10273 24398;24399;24400;24401;24402;24403;24404 19607;19608;19609;19610;19611;19612;19613;19614;19615 19610 185 9 195050 0 MSLRLSSASRR ______________________________ ______________________________ - M S R R S 1 3 0 0 0 0 0 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 11 2 1262.6877 CON__Q7Z3Z0;Q7Z3Z0 CON__Q7Z3Z0 1 11 KRT25 Keratin, type I cytoskeletal 25 yes no 2 0.041104 46.158 By MS/MS 3 0 1 1 0 0 0 + 9850 71 10274 24405 19616 19616 48 1 0 0 MSMKEVDEQMLNVQNK RHGRYLTVAAVFRGRMSMKEVDEQMLNVQN SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT R M S N K N 0 0 2 1 0 2 2 0 0 0 1 2 3 0 0 1 0 0 0 2 0 0 16 1 1922.89 P68371;P07437;Q13885;Q9BVA1 P68371 321 336 TUBB4B;TUBB;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2;3 2.9679E-23 277.82 By MS/MS By MS/MS 6.6 1.02 10 3 2 14 1 77290000 77206000 84484 9851 1212;509;1412;2331 10275;10276;10277;10278 24406;24407;24408;24409;24410;24411;24412;24413;24414;24415;24416;24417;24418;24419;24420 19617;19618;19619;19620;19621;19622;19623;19624;19625;19626;19627;19628;19629;19630 19629 207;210;211 14 552530 86573 MSPAAAAAGAGERR ______________________________ ______________________________ - M S R R R 6 2 0 0 0 0 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 14 1 1314.6463 A8CG34;Q96HA1 A8CG34 1 14 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 2 0.0461 57.347 By MS/MS 8.5 0.5 1 1 2 734480 734480 0 9852 28 10279 24421;24422 19631 19631 11 0 13565 0 MSPYKDILETHLR AHLPDVCVNLMKALKMSPYKDILETHLREK LKMSPYKDILETHLREKITAQSIEELCAVN K M S L R E 0 1 0 1 0 0 1 0 1 1 2 1 1 0 1 1 1 0 1 0 0 0 13 1 1601.8236 P78527 P78527 1408 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.025428 78.287 By MS/MS 1.5 0.5 1 1 2 367310 367310 0 9853 1225 10280 24423;24424 19632 19632 727 1 119350 0 MSQALGR ELLEDYYQSGRMLLRMSQALGRIVLAGREM QSGRMLLRMSQALGRIVLAGREMTRLAGFT R M S G R I 1 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 7 0 761.38541 P28288 P28288 367 373 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.028997 104.75 By MS/MS 5 0 1 1 872270 872270 0 9854 752 10281 24425 19633 19633 378 1 8748.4 0 MSQLEVK KNTNIAQKQEAFSIRMSQLEVKEKELNKLK KQEAFSIRMSQLEVKEKELNKLKQESDQLV R M S V K E 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 7 0 833.43169 P15924 P15924 316 322 DSP Desmoplakin yes yes 2 0.04828 90.37 By MS/MS 1.5 0.5 1 1 2 274800 274800 0 9855 628 10282 24426;24427 19634 19634 303 1 87215 0 MSSTFIGNSTAIQELFK NVKVAVCDIPPRGLKMSSTFIGNSTAIQEL STFIGNSTAIQELFKRISEQFTAMFRRKAF K M S F K R 1 0 1 0 0 1 1 1 0 2 1 1 1 2 0 3 2 0 0 0 0 0 17 0 1872.9291 Q13509 Q13509 363 379 TUBB3 Tubulin beta-3 chain yes yes 2 3.4641E-44 318.7 By MS/MS 6.5 0.5 1 1 2 2024900 2024900 0 9856 1393 10283 24428;24429 19635 19635 1 14445 0 MSTAGKVIK ______________________________ ______________________________ - M S I K C 1 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 1 0 0 1 0 0 9 1 933.53174 P07327;P00326;P00325 P07327 1 9 ADH1A;ADH1C;ADH1B Alcohol dehydrogenase 1A;Alcohol dehydrogenase 1C;Alcohol dehydrogenase 1B yes no 2 0.019762 80.229 By MS/MS 6.5 0.5 1 1 2 1729800 1729800 0 9857 439 10284 24430;24431 19636 19636 165 1 14203 0 MSTSPEAFLALR ESKVPADLLKRAFVRMSTSPEAFLALRSHF FVRMSTSPEAFLALRSHFASSHALICISHW R M S L R S 2 1 0 0 0 0 1 0 0 0 2 0 1 1 1 2 1 0 0 0 0 0 12 0 1321.67 P78527 P78527 3890 3901 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.4831E-06 185.61 By MS/MS 2.43 1.18 2 2 1 2 7 3102400 3102400 0 9858 1225 10285;10286 24432;24433;24434;24435;24436;24437;24438 19637;19638;19639;19640;19641;19642 19639 728 6 739400 0 MSVDAVEIETLR AAEMHKMKSTTQANRMSVDAVEIETLRKTV ANRMSVDAVEIETLRKTVEDYFCFCYGKAL R M S L R K 1 1 0 1 0 0 2 0 0 1 1 0 1 0 0 1 1 0 0 2 0 0 12 0 1361.6861 P78347 P78347 102 113 GTF2I General transcription factor II-I yes yes 2 4.5663E-09 220.82 By MS/MS 3 0 2 2 648020 648020 0 9859 1221 10287;10288 24439;24440 19643;19644 19643 710 2 11857 0 MSVDAVEIETLRK AAEMHKMKSTTQANRMSVDAVEIETLRKTV NRMSVDAVEIETLRKTVEDYFCFCYGKALG R M S R K T 1 1 0 1 0 0 2 0 0 1 1 1 1 0 0 1 1 0 0 2 0 0 13 1 1489.781 P78347 P78347 102 114 GTF2I General transcription factor II-I yes yes 2 0.014341 103.21 By MS/MS 3 0 1 1 326400 326400 0 9860 1221 10289 24441 19645 19645 710 1 5972.2 0 MSVEADINGLRR ADDFRTKYETELNLRMSVEADINGLRRVLD NLRMSVEADINGLRRVLDELTLARADLEMQ R M S R R V 1 2 1 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 1 0 0 12 1 1359.6929 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 212 223 KRT14 Keratin, type I cytoskeletal 14 no no 2;3 0.0083512 109.44 By MS/MS 4 0 2 2 7976700 7976700 0 + 9861 39 10290 24442;24443 19646;19647 19646 20 2 750660 0 MSVLNNSEVK ______________________________ ______________________________ - M S V K L 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 0 2 0 0 10 0 1119.5594 Q8NH64 Q8NH64 1 10 OR51A7 Olfactory receptor 51A7 yes yes 3 0.054268 42.802 By MS/MS 7 0 1 1 116000 116000 0 9862 1966 10291 24444 19648 19648 964 0 1820.9 0 MSYLLLPLDSSK EESTVFSQAIHYANRMSYLLLPLDSSKSRL ANRMSYLLLPLDSSKSRLLRERAGLGDLES R M S S K S 0 0 0 1 0 0 0 0 0 0 4 1 1 0 1 3 0 0 1 0 0 0 12 0 1365.7214 O95248 O95248 765 776 SBF1 Myotubularin-related protein 5 yes yes 2 0.00128 119.16 By MS/MS 2 0 1 1 87786 87786 0 9863 398 10292 24445 19649 19649 156 1 29693 0 MTAMDNASK YYSLKESTTSEQSARMTAMDNASKNASEMI SEQSARMTAMDNASKNASEMIDKLTLTFNR R M T S K N 2 0 1 1 0 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 9 0 967.4103 P36542 P36542 254 262 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.03221 83.647 By MS/MS 8 0 1 1 1330900 1330900 0 9864 835 10293 24446 19650 19650 1 16802 0 MTATAEVETPKMEK ______________________________ ______________________________ - M T E K S 2 0 0 0 0 0 3 0 0 0 0 2 2 0 1 0 3 0 0 1 0 0 14 1 1564.7477 Q5HYM0 Q5HYM0 1 14 ZC3H12B Probable ribonuclease ZC3H12B yes yes 2 0.016113 89.827 By MS/MS By MS/MS 4.43 2.56 1 2 1 1 1 1 1 6 1451900 168540 1283400 9865 1603 10294 24447;24448;24449;24450;24451;24452;24453 19651;19652;19653;19654 19651 887 4 40612 1741000 MTDAAVSFAK ______________________________ ______________________________ - M T A K D 3 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 1 0 0 10 0 1039.5008 P05141 P05141 1 10 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.022331 86.882 By MS/MS 8.5 0.5 1 1 2 508410 508410 0 9866 487 10295 24454;24455 19655 19655 1 7270.5 0 MTEIQTPENTPR ATFIGLDKMAVWAKKMTEIQTPENTPRLFD AKKMTEIQTPENTPRLFDLVKVKDEKIRQA K M T P R L 0 1 1 0 0 1 2 0 0 1 0 0 1 0 2 0 3 0 0 0 0 0 12 0 1415.6715 Q9NTJ3 Q9NTJ3 681 692 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 2.0133E-06 196.88 By MS/MS 3 0 1 1 201590 201590 0 9867 2575 10296 24456 19656 19656 1114 1 3688.5 0 MTEQAISFAK ______________________________ ______________________________ - M T A K D 2 0 0 0 0 1 1 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 10 0 1124.5536 P12236 P12236 1 10 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0067847 103.26 By MS/MS 3.83 3.34 2 2 1 1 6 1305600 1305600 0 9868 589 10297;10298 24457;24458;24459;24460;24461;24462 19657;19658;19659;19660;19661 19661 276 5 214470 0 MTEWETAAPAVAETPDIK ______________________________ WETAAPAVAETPDIKLFGKWSTDDVQINDI - M T I K L 4 0 0 1 0 0 3 0 0 1 0 1 1 0 2 0 3 1 0 1 0 0 18 0 1958.9295 P46782 P46782 1 18 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.00014955 160.38 By MS/MS 9 0 1 1 447330 447330 0 9869 919 10299 24463 19662 19662 483 1 8803.6 0 MTGFELTEGVK EYGGREMQDLGGGERMTGFELTEGVKTSGM GGERMTGFELTEGVKTSGMPEICQEYSGTL R M T V K T 0 0 0 0 0 0 2 2 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1210.5904 Q02413 Q02413 651 661 DSG1 Desmoglein-1 yes yes 2 0.00029557 155.06 By MS/MS By MS/MS 4.83 3.16 2 2 1 2 1 1 1 2 4 8 3164800 1812400 1352400 9870 1277 10300;10301 24464;24465;24466;24467;24468;24469;24470;24471;24472;24473;24474;24475 19663;19664;19665;19666;19667;19668;19669;19670;19671;19672 19672 763 10 211850 1394700 MTGLVDEAIDTK HFETMKNQWIDNVEKMTGLVDEAIDTKSLL VEKMTGLVDEAIDTKSLLDASEEAIKKDLD K M T T K S 1 0 0 2 0 0 1 1 0 1 1 1 1 0 0 0 2 0 0 1 0 0 12 0 1291.633 P18206 P18206 709 720 VCL Vinculin yes yes 2 0.00027008 145.91 By MS/MS 3 0 2 2 501490 501490 0 9871 653 10302;10303 24476;24477 19673;19674 19674 327 2 9175.9 0 MTILQTYFR RGSCSTEVEKETQEKMTILQTYFRQNRDEV KETQEKMTILQTYFRQNRDEVLDNLLAFVC K M T F R Q 0 1 0 0 0 1 0 0 0 1 1 0 1 1 0 0 2 0 1 0 0 0 9 0 1171.606 O75348 O75348 81 89 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 2 0.0020117 120.31 By MS/MS 10 0 1 1 69965 69965 0 9872 313 10304 24478 19675 19675 134 1 3770.8 0 MTISQQEFGR IATTGTEDSDDALLKMTISQQEFGRTGLPD DALLKMTISQQEFGRTGLPDLSSMTEEEQI K M T G R T 0 1 0 0 0 2 1 1 0 1 0 0 1 1 0 1 1 0 0 0 0 0 10 0 1195.5656 P55036 P55036 263 272 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2 2.8069E-05 162.64 By MS/MS 6 0 1 1 1119100 1119100 0 9873 1052 10305 24479 19676 19676 1 7693.3 0 MTITEQKYEGEYR VSGLFLTRLRRPIGKMTITEQKYEGEYRYV GKMTITEQKYEGEYRYVNSRLITNSEEIAF K M T Y R Y 0 1 0 0 0 1 3 1 0 1 0 1 1 0 0 0 2 0 2 0 0 0 13 1 1646.761 P28288 P28288 254 266 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2;3 0.00010532 188.27 By MS/MS 5 0 2 2 999920 999920 0 9874 752 10306 24480;24481 19677;19678 19677 2 10029 0 MTLADIER DILFQLADLYEPRGRMTLADIERIAPLEEG LYEPRGRMTLADIERIAPLEEGTLPFNLAE R M T E R I 1 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 8 0 947.47462 Q9UJS0 Q9UJS0 285 292 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00026588 166.68 By MS/MS By matching 5 0 3 2 1 17582000 17547000 35444 9875 2748 10307;10308 24482;24483;24484 19679;19680 19679 1160 2 175990 29766 MTLDDFR TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA R M T F R I 0 1 0 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 896.4062 P35527;CON__P35527 P35527 234 240 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.010617 133.81 By MS/MS By MS/MS 4.65 2.5 2 1 3 3 3 2 1 1 1 11 6 81982000 53594000 28388000 + 9876 822 10309;10310 24485;24486;24487;24488;24489;24490;24491;24492;24493;24494;24495;24496;24497;24498;24499;24500;24501 19681;19682;19683;19684;19685;19686;19687;19688;19689;19690 19685 405 10 3880700 8806200 MTLDTLSIYETPSMGLLDK WPIFKWSHDGKFFARMTLDTLSIYETPSMG TLSIYETPSMGLLDKKSLKISGIKDFSWSP R M T D K K 0 0 0 2 0 0 1 1 0 1 4 1 2 0 1 2 3 0 1 0 0 0 19 0 2127.0479 P55884 P55884 441 459 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 1.2663E-05 190.57 By MS/MS 4.33 0.471 2 1 3 914150 914150 0 9877 1065 10311;10312 24502;24503;24504 19691;19692 19691 595;596 2 66870 0 MTLDTLSIYETPSMGLLDKK WPIFKWSHDGKFFARMTLDTLSIYETPSMG LSIYETPSMGLLDKKSLKISGIKDFSWSPG R M T K K S 0 0 0 2 0 0 1 1 0 1 4 2 2 0 1 2 3 0 1 0 0 0 20 1 2255.1429 P55884 P55884 441 460 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 2.9973E-06 133.96 By MS/MS 5 0.816 1 1 1 3 4506400 4506400 0 9878 1065 10313 24505;24506;24507 19693;19694;19695 19694 595;596 2 236070 0 MTNGFSGADLTEICQR KSPVAKDVDLEFLAKMTNGFSGADLTEICQ TNGFSGADLTEICQRACKLAIRESIESEIR K M T Q R A 1 1 1 1 1 1 1 2 0 1 1 0 1 1 0 1 2 0 0 0 0 0 16 0 1798.7978 P55072 P55072 678 693 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.0122E-16 259.27 By MS/MS 4.33 0.471 2 1 3 2877400 2877400 0 9879 1054 10314;10315 24508;24509;24510 19696;19697;19698 19697 592 3 225840 0 MTQLEMEIQEAFLR IDMTPIEADFSWQKKMTQLEMEIQEAFLRF KMTQLEMEIQEAFLRFMASILKGYRTYLRP K M T L R F 1 1 0 0 0 2 3 0 0 1 2 0 2 1 0 0 1 0 0 0 0 0 14 0 1737.843 Q5VZ89 Q5VZ89 555 568 DENND4C DENN domain-containing protein 4C yes yes 2 3.3766E-05 143.5 By MS/MS 6 0 1 1 216400 216400 0 9880 1658 10316 24511 19699 19699 903 0 1487.6 0 MTQLVLPGMVER VIKKMININILSVCKMTQLVLPGMVERSKG VCKMTQLVLPGMVERSKGAILNISSGSGML K M T E R S 0 1 0 0 0 1 1 1 0 0 2 0 2 0 1 0 1 0 0 2 0 0 12 0 1372.7207 Q53GQ0 Q53GQ0 168 179 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.00071118 130.1 By MS/MS 8 0 3 3 8854500 8854500 0 9881 1587 10317;10318;10319 24512;24513;24514 19700;19701;19702 19701 884;885 2 111790 0 MTTETASEDDNFGTAQSNK LLGDLLFHISGVTGKMTTETASEDDNFGTA TASEDDNFGTAQSNKAIITALGVERRNRVL K M T N K A 2 0 2 2 0 1 2 1 0 0 0 1 1 1 0 2 4 0 0 0 0 0 19 0 2045.8484 Q92616 Q92616 1853 1871 GCN1L1 Translational activator GCN1 yes yes 2 4.1922E-58 356.36 By MS/MS 2 0 1 1 1129700 1129700 0 9882 2064 10320 24515 19703 19703 999 1 382120 0 MTVVQAYINEK TAICSDKTGTLTMNRMTVVQAYINEKHYKK TMNRMTVVQAYINEKHYKKVPEPEAIPPNI R M T E K H 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 0 1 0 1 2 0 0 11 0 1294.6591 P20020 P20020 485 495 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 0.0026164 129.88 By MS/MS 2 0 1 1 0 0 0 9883 667 10321 24516 19704 19704 1 0 0 MVADPPRDSK ______________________________ ______________________________ - M V S K G 1 1 0 2 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 1 0 0 10 1 1114.5441 Q15758 Q15758 1 10 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.017338 84.615 By MS/MS 4.2 2.32 1 1 1 1 1 5 1481000 1481000 0 9884 1530 10322 24517;24518;24519;24520;24521 19705;19706;19707 19706 3 15340 0 MVDVVEKEDVNEAIR LLAILRLSTALARLRMVDVVEKEDVNEAIR MVDVVEKEDVNEAIRLMEMSKDSLLGDKGQ R M V I R L 1 1 1 2 0 0 3 0 0 1 0 1 1 0 0 0 0 0 0 4 0 0 15 1 1744.8665 P33993 P33993 621 635 MCM7 DNA replication licensing factor MCM7 yes yes 3 0.00045385 128.76 By MS/MS 4.5 0.5 1 1 2 2756700 2756700 0 9885 808 10323 24522;24523 19708;19709 19709 2 115500 0 MVEINFLCVHKK SAIPANIHIYDTEKKMVEINFLCVHKKLRS EKKMVEINFLCVHKKLRSKRVAPVLIREIT K M V K K L 0 0 1 0 1 0 1 0 1 1 1 2 1 1 0 0 0 0 0 2 0 0 12 1 1516.7894 P30419;O60551 P30419 242 253 NMT1;NMT2 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase 2 yes no 2 0.051208 86.136 By MS/MS By matching 3.5 0.5 1 1 1 1 1047300 556210 491080 9886 262 10324 24524;24525 19710 19710 115 1 52343 62507 MVEKDQDGGR KSVARRVLQALEGLKMVEKDQDGGRKLTPQ LEGLKMVEKDQDGGRKLTPQGQRDLDRIAG K M V G R K 0 1 0 2 0 1 1 2 0 0 0 1 1 0 0 0 0 0 0 1 0 0 10 1 1133.5135 P39019 P39019 112 121 RPS19 40S ribosomal protein S19 yes yes 2;3 3.3243E-05 176.6 By MS/MS 9.75 0.433 1 3 4 5736200 5736200 0 9887 853 10325;10326 24526;24527;24528;24529 19711;19712;19713;19714 19713 438 4 309160 0 MVEKDQDGGRK KSVARRVLQALEGLKMVEKDQDGGRKLTPQ EGLKMVEKDQDGGRKLTPQGQRDLDRIAGQ K M V R K L 0 1 0 2 0 1 1 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 11 2 1261.6085 P39019 P39019 112 122 RPS19 40S ribosomal protein S19 yes yes 2;3 2.5863E-05 146.71 By MS/MS 9.67 0.471 1 2 3 3198100 3198100 0 9888 853 10327;10328 24530;24531;24532 19715;19716 19716 438 2 171310 0 MVESAVIFR RISSAKFLGELYNYRMVESAVIFRTLYSFT ELYNYRMVESAVIFRTLYSFTSFGVNPDGS R M V F R T 1 1 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 2 0 0 9 0 1050.5532 Q9HAU5 Q9HAU5 883 891 UPF2 Regulator of nonsense transcripts 2 yes yes 2 0.0015503 127.02 By MS/MS 3 0 1 1 96558 96558 0 9889 2494 10329 24533 19717 19717 1 1766.7 0 MVFINNIALAQIK QKMLNGLEDSIGLSKMVFINNIALAQIKNN SKMVFINNIALAQIKNNNIDAAIENIENML K M V I K N 2 0 2 0 0 1 0 0 0 3 1 1 1 1 0 0 0 0 0 1 0 0 13 0 1473.8378 P42704 P42704 1177 1189 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 5.5543E-08 218.55 By MS/MS 4 0.816 1 1 1 3 492440 492440 0 9890 886 10330 24534;24535;24536 19718;19719 19718 472 2 28778 0 MVGGVLVER IDTLKEVDETRKCYRMVGGVLVERTVKEVL TRKCYRMVGGVLVERTVKEVLPALENNKEQ R M V E R T 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 958.52699 Q9UHV9 Q9UHV9 73 81 PFDN2 Prefoldin subunit 2 yes yes 2 0.008448 101.64 By MS/MS 9 0 1 1 0 0 0 9891 2732 10331 24537 19720 19720 1157 1 0 0 MVGTKSEAQCK KGLVEHGRNWAAIAKMVGTKSEAQCKNFYF AIAKMVGTKSEAQCKNFYFNYKRRHNLDNL K M V C K N 1 0 0 0 1 1 1 1 0 0 0 2 1 0 0 1 1 0 0 1 0 0 11 1 1237.5795 O75376 O75376 653 663 NCOR1 Nuclear receptor corepressor 1 yes yes 2 0.045986 72.23 By MS/MS 6 0.816 1 1 1 3 4619800 4619800 0 9892 316 10332 24538;24539;24540 19721 19721 1 40005 0 MVGVPAALDMMLTGR LGALPGAGGTQRLPKMVGVPAALDMMLTGR MVGVPAALDMMLTGRSIRADRAKKMGLVDQ K M V G R S 2 1 0 1 0 0 0 2 0 0 2 0 3 0 1 0 1 0 0 2 0 0 15 0 1560.7826 P40939 P40939 191 205 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.006519 78.548 By MS/MS 5 0 2 2 677430 677430 0 9893 865 10333;10334 24541;24542 19722;19723 19722 452;453;454 2 6794.2 0 MVIITGPPEAQFK SIKIAPPETPDSKVRMVIITGPPEAQFKAQ VRMVIITGPPEAQFKAQGRIYGKLKEENFF R M V F K A 1 0 0 0 0 1 1 1 0 2 0 1 1 1 2 0 1 0 0 1 0 0 13 0 1429.7639 Q9NZI8;O00425;Q9Y6M1 Q9NZI8 453 465 IGF2BP1;IGF2BP3;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2 0.00018598 163.66 By MS/MS 5 0 2 2 6326700 6326700 0 9894 2649 10335;10336 24543;24544 19724;19725 19724 1128 2 63454 0 MVINHLEK AQTTRTAYGPNGMNKMVINHLEKLFVTNDA GPNGMNKMVINHLEKLFVTNDAATILRELE K M V E K L 0 0 1 0 0 0 1 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 982.52699 P50990 P50990 55 62 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0038052 131.03 By MS/MS 6 0.707 1 2 1 4 16002000 16002000 0 9895 984 10337;10338 24545;24546;24547;24548 19726;19727 19727 537 2 115720 0 MVKLEVIDMEVMDK M V D K 0 0 0 2 0 0 2 0 0 1 1 2 3 0 0 0 0 0 0 3 0 0 14 1 1678.8344 REV__Q92845 yes yes 3 0.04955 65.179 By MS/MS 7.2 1.17 2 1 1 1 5 2993300 2993300 0 + 9896 2978 10339 24549;24550;24551;24552;24553 19728 19728 1228 1 32608 0 MVLLDLPSISSQVVR MVGAEQLLLDTHSLKMVLLDLPSISSQVVR MVLLDLPSISSQVVRKAPASYTKIVVKGMT K M V V R K 0 1 0 1 0 1 0 0 0 1 3 0 1 0 1 3 0 0 0 3 0 0 15 0 1655.928 Q5VIR6 Q5VIR6 705 719 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0014308 114.24 By MS/MS 4 0 1 1 101000 101000 0 9897 1644 10340 24554 19729 19729 896 1 9505 0 MVLNETYR YSNFLDTLKNPEFNKMVLNETYRNIKVLLT KNPEFNKMVLNETYRNIKVLLTSDKAAANF K M V Y R N 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 8 0 1024.5012 A5YKK6 A5YKK6 1164 1171 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.020455 99.139 By MS/MS 2 0 1 1 489540 489540 0 9898 19 10341 24555 19730 19730 1 165580 0 MVLSGCAIIVR SGGPAVPTVQRGIIKMVLSGCAIIVRGQPR GIIKMVLSGCAIIVRGQPRGGPPPERQINL K M V V R G 1 1 0 0 1 0 0 1 0 2 1 0 1 0 0 1 0 0 0 2 0 0 11 0 1217.6624 Q7KZF4 Q7KZF4 26 36 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0023332 110.76 By MS/MS 4 0 1 1 691720 691720 0 9899 1755 10342 24556 19731 19731 926 1 65095 0 MVNDAEKFAEEDKK ITNDQNRLTPEEIERMVNDAEKFAEEDKKL RMVNDAEKFAEEDKKLKERIDTRNELESYA R M V K K L 2 0 1 2 0 0 3 0 0 0 0 3 1 1 0 0 0 0 0 1 0 0 14 2 1652.7716 P11021 P11021 541 554 HSPA5 78 kDa glucose-regulated protein yes yes 3;4 0.0040491 104.7 By MS/MS By matching 5 0 4 3 1 9238500 9194500 44001 9900 571 10343;10344 24557;24558;24559;24560 19732;19733;19734 19733 255 3 92217 36951 MVNHFIAEFK TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK DFDNRMVNHFIAEFKRKHKKDISENKRAVR R M V F K R 1 0 1 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 1 0 0 10 0 1234.6169 P11142 P11142 237 246 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.0002702 142.36 By MS/MS 5.2 0.4 4 1 5 67392000 67392000 0 9901 572 10345;10346 24561;24562;24563;24564;24565 19735;19736;19737;19738 19737 260 4 674790 0 MVNHFIAEFKR TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK FDNRMVNHFIAEFKRKHKKDISENKRAVRR R M V K R K 1 1 1 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 1 0 0 11 1 1390.718 P11142 P11142 237 247 HSPA8 Heat shock cognate 71 kDa protein yes yes 3 0.0045534 94.82 By MS/MS 5 0 1 1 2319500 2319500 0 9902 572 10347 24566 19739 19739 260 1 23263 0 MVNSNLASVEELK EVRSKSDPIMLLKDRMVNSNLASVEELKEI DRMVNSNLASVEELKEIDVEVRKEIEDAAQ R M V L K E 1 0 2 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 0 2 0 0 13 0 1432.7232 P08559 P08559 324 336 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0022201 128.88 By MS/MS 7 0 1 1 54489 0 54489 9903 524 10348 24567 19740 19740 227 1 0 98134 MVPPVQVSPLIK ______________________________ ______________________________ - M V I K L 0 0 0 0 0 1 0 0 0 1 1 1 1 0 3 1 0 0 0 3 0 0 12 0 1306.7683 P56385 P56385 1 12 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.0012126 120.45 By MS/MS 10 0 1 1 1011200 1011200 0 9904 1072 10349 24568 19741 19741 602 1 54501 0 MVQEAEKYK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ KEDIERMVQEAEKYKAEDEKQRDKVSSKNS R M V Y K A 1 0 0 0 0 1 2 0 0 0 0 2 1 0 0 0 0 0 1 1 0 0 9 1 1124.5536 P11142;P0DMV9;P0DMV8 P11142 518 526 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.047142 101.25 By MS/MS 5 0 2 2 2080100 2080100 0 9905 572;550 10350;10351 24569;24570 19742;19743 19743 242;261 2 20862 0 MVQEAEKYKAEDEK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ RMVQEAEKYKAEDEKQRDKVSSKNSLESYA R M V E K Q 2 0 0 1 0 1 4 0 0 0 0 3 1 0 0 0 0 0 1 1 0 0 14 2 1696.7978 P11142 P11142 518 531 HSPA8 Heat shock cognate 71 kDa protein yes yes 3 0.0017446 119.74 By MS/MS 5 0 2 2 8814500 8814500 0 9906 572 10352;10353 24571;24572 19744;19745 19744 261 2 88405 0 MVQEAEKYKAEDEVQR ITNDKGRLSKEEIERMVQEAEKYKAEDEVQ VQEAEKYKAEDEVQRERVSAKNALESYAFN R M V Q R E 2 1 0 1 0 2 4 0 0 0 0 2 1 0 0 0 0 0 1 2 0 0 16 2 1951.9309 P0DMV9;P0DMV8 P0DMV9 518 533 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.00066892 151.49 By MS/MS By matching 5.25 0.433 3 1 3 1 17754000 17690000 64472 9907 550 10354;10355 24573;24574;24575;24576 19746;19747 19746 242 2 172830 54143 MVQFEENGRK RWSSLACNIALDAVKMVQFEENGRKEIDIK LDAVKMVQFEENGRKEIDIKKYARVEKIPG K M V R K E 0 1 1 0 0 1 2 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 10 1 1236.5921 P49368 P49368 182 191 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00044859 149.82 By MS/MS 5.8 0.748 4 4 2 10 9999900 9999900 0 9908 947 10356;10357 24577;24578;24579;24580;24581;24582;24583;24584;24585;24586 19748;19749;19750;19751;19752;19753 19749 519 6 83742 0 MVQQCCTYVEEITDLPIK LLSKRRSQLKQAVAKMVQQCCTYVEEITDL QCCTYVEEITDLPIKLRLIDTLRMVTEGKI K M V I K L 0 0 0 1 2 2 2 0 0 2 1 1 1 0 1 0 2 0 1 2 0 0 18 0 2226.0371 O00232 O00232 104 121 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 1.9451E-11 240.46 By MS/MS 6 0 1 1 1030200 1030200 0 9909 94 10358 24587 19754;19755 19754 59 2 7081.5 0 MVTGDNINTAR PDAIKKCQRAGITVRMVTGDNINTARAIAT ITVRMVTGDNINTARAIATKCGILHPGEDF R M V A R A 1 1 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 0 11 0 1190.5714 P20020;Q16720;P23634;Q01814 P20020 706 716 ATP2B1;ATP2B3;ATP2B4;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 2 yes no 2 0.0010206 133.81 By MS/MS 1.5 0.5 1 1 2 214010 214010 0 9910 667 10359 24588;24589 19756;19757 19756 334 2 72387 0 MVVDAVMMLDDLLQLK LSSKLISQQKAFFAKMVVDAVMMLDDLLQL VVDAVMMLDDLLQLKMIGIKKVQGGALEDS K M V L K M 1 0 0 3 0 1 0 0 0 0 4 1 3 0 0 0 0 0 0 3 0 0 16 0 1832.945 Q99832 Q99832 178 193 CCT7 T-complex protein 1 subunit eta yes yes 2 8.091E-05 134.18 By MS/MS 6 0 1 1 83791 83791 0 9911 2270 10360 24590 19758 19758 1058;1059;1060 1 576 0 MVVESAYEVIK MGTDNDSENWKEVHKMVVESAYEVIKLKGY EVHKMVVESAYEVIKLKGYTNWAIGLSVAD K M V I K L 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 1 3 0 0 11 0 1266.653 P07195 P07195 234 244 LDHB L-lactate dehydrogenase B chain yes yes 2 1.2213E-06 187.5 By MS/MS 7.75 0.829 2 1 1 4 3432900 3432900 0 9912 506 10361;10362 24591;24592;24593;24594 19759;19760 19759 205 2 52661 0 MVVLSLPR EECRYKLYQEMFAWKMVVLSLPRIQSQRYQ QEMFAWKMVVLSLPRIQSQRYQVGVHYELT K M V P R I 0 1 0 0 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 2 0 0 8 0 913.54191 Q14204 Q14204 991 998 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.011994 108.09 By MS/MS 1.5 0.5 1 1 2 543060 543060 0 9913 1433 10363 24595;24596 19761;19762 19761 833 2 157290 0 MVVPGLDGAQIPR LVQALQTKVTQQGLKMVVPGLDGAQIPRDP LKMVVPGLDGAQIPRDPSQQELPRLLSAAC K M V P R D 1 1 0 1 0 1 0 2 0 1 1 0 1 0 2 0 0 0 0 2 0 0 13 0 1351.7282 P49327 P49327 1159 1171 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00036654 144.17 By MS/MS By MS/MS 2 0.707 2 4 2 7 1 12846000 12645000 201540 9914 946 10364;10365 24597;24598;24599;24600;24601;24602;24603;24604 19763;19764;19765;19766;19767;19768;19769 19767 509 7 3449500 285020 MVVPGLDGAQIPRDPSQQELPR LVQALQTKVTQQGLKMVVPGLDGAQIPRDP GAQIPRDPSQQELPRLLSAACRLQLNGNLQ K M V P R L 1 2 0 2 0 3 1 2 0 1 2 0 1 0 4 1 0 0 0 2 0 0 22 1 2402.2376 P49327 P49327 1159 1180 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.017233 66.264 By MS/MS 2 0 1 1 1388600 1388600 0 9915 946 10366 24605 19770 19770 509 1 469680 0 MVVPVAALFTPLK FSWNVWPSSRLEATRMVVPVAALFTPLKER TRMVVPVAALFTPLKERPDLPPIQYEPVLC R M V L K E 2 0 0 0 0 0 0 0 0 0 2 1 1 1 2 0 1 0 0 3 0 0 13 0 1384.8152 Q15436 Q15436 34 46 SEC23A Protein transport protein Sec23A yes yes 2 0.0011291 123.11 By MS/MS 5 0 1 1 86834 86834 0 9916 1513 10367 24606 19771;19772 19772 871 2 870.9 0 MVVSIAEDLLR GVHQCPLGIPHAKGKMVVSIAEDLLRTAAQ AKGKMVVSIAEDLLRTAAQNSRLSLQRTQA K M V L R T 1 1 0 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 0 2 0 0 11 0 1244.6799 Q9P2D3 Q9P2D3 529 539 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.00014626 147.4 By MS/MS 2 0 1 1 95127 95127 0 9917 2681 10368 24607 19773 19773 1141 1 32176 0 MYAALGDPK KTPVNKKNIEKMYERMYAALGDPKAPGLGA EKMYERMYAALGDPKAPGLGAFRRKFIQTF R M Y P K A 2 0 0 1 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 9 0 964.4688 P78527 P78527 3613 3621 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0027047 113.26 By MS/MS 1.5 0.5 1 1 2 337770 337770 0 9918 1225 10369 24608;24609 19774 19774 1 106850 0 MYKEEGLK TQPGYANTLRDAAPKMYKEEGLKAFYKGVA LRDAAPKMYKEEGLKAFYKGVAPLWMRQIP K M Y L K A 0 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 1 0 0 0 8 1 996.49502 Q00325 Q00325 207 214 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.023909 115.49 By MS/MS 1.5 0.5 1 1 2 527820 527820 0 9919 1259 10370 24610;24611 19775 19775 1 158270 0 MYLQVETR ______________________________ ______________________________ - M Y T R T 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 8 0 1038.5168 Q9BQA9 Q9BQA9 1 8 C17orf62 Uncharacterized protein C17orf62 yes yes 2 0.01761 101.64 By MS/MS 9 0 2 2 1282900 1282900 0 9920 2287 10371;10372 24612;24613 19776;19777 19776 1065 2 25247 0 NAAANDKLK LRRDLRIKSQELEVKNAAANDKLKKMVKDQ QELEVKNAAANDKLKKMVKDQQEAEKKKVM K N A L K K 3 0 2 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 943.50869 Q14204 Q14204 3233 3241 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0031698 138.06 By MS/MS 2 0.816 1 1 1 3 643050 643050 0 9921 1433 10373 24614;24615;24616 19778 19778 1 166550 0 NAAAQGSPEATLR RPPLYLERILFVLLRNAAAQGSPEATLRLA LRNAAAQGSPEATLRLAQPLHACLVQCSRE R N A L R L 4 1 1 0 0 1 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 13 0 1284.6422 Q14674 Q14674 107 119 ESPL1 Separin yes yes 2 0.00025455 157.03 By MS/MS 2.5 0.5 1 1 2 735090 735090 0 9922 1449 10374 24617;24618 19779 19779 1 106180 0 NAAGALDLLK VVRFAKKMDKMVQKKNAAGALDLLKELKNI MVQKKNAAGALDLLKELKNIPMTLELLQST K N A L K E 3 0 1 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 984.5604 P23193 P23193 20 29 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0094707 95.523 By MS/MS 7 0 1 1 410450 410450 0 9923 699 10375 24619 19780 19780 1 6443.3 0 NAAIAVLEELK FVGEGEGKSKKISKKNAAIAVLEELKKLPP ISKKNAAIAVLEELKKLPPLPAVERVKPRI K N A L K K 3 0 1 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1169.6656 O95793 O95793 240 250 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 0.043841 77.533 By MS/MS 6 0 1 1 370320 370320 0 9924 426 10376 24620 19781 19781 0 2545.7 0 NAAIAVLEELKK FVGEGEGKSKKISKKNAAIAVLEELKKLPP SKKNAAIAVLEELKKLPPLPAVERVKPRIK K N A K K L 3 0 1 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 12 1 1297.7606 O95793 O95793 240 251 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 0.00041933 155.53 By MS/MS 6 0 1 1 1291000 1291000 0 9925 426 10377 24621 19782 19782 1 8874.9 0 NAAQVLVGIPLETGQK RQHLASIYEKEEDWRNAAQVLVGIPLETGQ AAQVLVGIPLETGQKQYNVDYKLETYLKIA R N A Q K Q 2 0 1 0 0 2 1 2 0 1 2 1 0 0 1 0 1 0 0 2 0 0 16 0 1636.9148 Q9BT78 Q9BT78 122 137 COPS4 COP9 signalosome complex subunit 4 yes yes 2 6.427E-07 207.47 By MS/MS 7 0 1 1 1391400 1391400 0 9926 2315 10378 24622 19783 19783 1 21843 0 NACDHLSGFNVCNR RGTAYVVYEDIFDAKNACDHLSGFNVCNRY KNACDHLSGFNVCNRYLVVLYYNANRAFQK K N A N R Y 1 1 3 1 2 0 0 1 1 0 1 0 0 1 0 1 0 0 0 1 0 0 14 0 1662.6991 Q9Y3B4 Q9Y3B4 72 85 SF3B6 Splicing factor 3B subunit 6 yes yes 3 0.00035815 139.19 By MS/MS 10 0 1 1 358290 358290 0 9927 2864 10379 24623 19784 19784 1 19310 0 NACIECSVNQNSIR ASSLQLITECFRCLRNACIECSVNQNSIRN RNACIECSVNQNSIRNLDTIGVAVDLILLF R N A I R N 1 1 3 0 2 1 1 0 0 2 0 0 0 0 0 2 0 0 0 1 0 0 14 0 1663.7406 Q9UBB4 Q9UBB4 90 103 ATXN10 Ataxin-10 yes yes 2 6.3194E-33 303.71 By MS/MS 6.5 0.5 1 1 2 3899900 3899900 0 9928 2693 10380 24624;24625 19785 19785 1 51994 0 NADCSSGPGQR VDLTSFEQLALPVLRNADCSSGPGQRVCVI PVLRNADCSSGPGQRVCVIDEIGKMELFSQ R N A Q R V 1 1 1 1 1 1 0 2 0 0 0 0 0 0 1 2 0 0 0 0 0 0 11 0 1147.4676 Q9BSD7 Q9BSD7 98 108 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 3.242E-07 199.33 By MS/MS 9 0 1 1 267900 267900 0 9929 2304 10381 24626 19786 19786 1 5272.3 0 NADDDRGPR GPRRGGADDERSSWRNADDDRGPRRGLDDD ERSSWRNADDDRGPRRGLDDDRGPRRGMDD R N A P R R 1 2 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 9 1 1014.4479 Q14152 Q14152 1062 1070 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0046481 134.77 By MS/MS 6.14 2.9 1 1 1 1 1 1 1 7 2658800 2658800 0 9930 1422 10382 24627;24628;24629;24630;24631;24632;24633 19787;19788;19789 19787 3 209140 0 NADDDRGPRR GPRRGGADDERSSWRNADDDRGPRRGLDDD RSSWRNADDDRGPRRGLDDDRGPRRGMDDD R N A R R G 1 3 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 10 2 1170.549 Q14152 Q14152 1062 1071 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.031656 78.556 By MS/MS 3 0 1 1 1474200 1474200 0 9931 1422 10383 24634 19790 19790 1 26973 0 NADDDRIPR RGPRRGLDDDRGPWRNADDDRIPRRGAEDD DRGPWRNADDDRIPRRGAEDDRGPWRNMDD R N A P R R 1 2 1 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 1 1070.5105 Q14152 Q14152 1122 1130 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0035545 139.97 By MS/MS By matching 4.33 2.43 1 1 1 1 2 4 2 60878000 60821000 56719 9932 1422 10384 24635;24636;24637;24638;24639;24640 19791;19792 19791 2 1610600 85714 NADDEYLVTSIAK IARCSQPEISWWGWRNADDEYLVTSIAKAC WRNADDEYLVTSIAKACALDPGTRATGGSL R N A A K A 2 0 1 2 0 0 1 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 13 0 1437.6987 Q9NYA4 Q9NYA4 245 257 MTMR4 Myotubularin-related protein 4 yes yes 2 2.3972E-11 273.24 By MS/MS 3 0 1 1 195370 195370 0 9933 2632 10385 24641 19793 19793 1 3574.6 0 NADELVK DGTTSVVIIAAELLKNADELVKQKIHPTSV IIAAELLKNADELVKQKIHPTSVISGYRLA K N A V K Q 1 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 787.40758 P17987 P17987 103 109 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.049893 90.37 By MS/MS By matching 6.33 0.471 2 1 2 1 11546000 11516000 29774 9934 648 10386 24642;24643;24644 19794 19794 1 83599 30510 NADELVKQK DGTTSVVIIAAELLKNADELVKQKIHPTSV AAELLKNADELVKQKIHPTSVISGYRLACK K N A Q K I 1 0 1 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1043.5611 P17987 P17987 103 111 TCP1 T-complex protein 1 subunit alpha yes yes 2 4.5157E-06 181.41 By MS/MS 3.5 2.5 1 1 2 7241600 7241600 0 9935 648 10387 24645;24646 19795;19796 19796 2 70328 0 NADGKIISLDAK TFINWGNLNITKIHKNADGKIISLDAKLNL IHKNADGKIISLDAKLNLENKDYKKTTKVT K N A A K L 2 0 1 2 0 0 0 1 0 2 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1243.6772 P07814 P07814 582 593 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0024656 134.49 By MS/MS 3 0 1 1 1032900 1032900 0 9936 512 10388 24647 19797 19797 1 18899 0 NADGYKLDK FLEYASPAHAVDAVKNADGYKLDKQHTFRV AVDAVKNADGYKLDKQHTFRVNLFTDFDKY K N A D K Q 1 0 1 2 0 0 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 9 1 1022.5033 P55884 P55884 249 257 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.00039162 166.07 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 16054000 16054000 0 9937 1065 10389 24648;24649;24650;24651;24652;24653 19798;19799;19800;19801 19801 4 1154200 0 NADGYKLDKQHTFR FLEYASPAHAVDAVKNADGYKLDKQHTFRV KNADGYKLDKQHTFRVNLFTDFDKYMTISD K N A F R V 1 1 1 2 0 1 0 1 1 0 1 2 0 1 0 0 1 0 1 0 0 0 14 2 1691.838 P55884 P55884 249 262 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0011599 118.73 By MS/MS 5 0.816 1 1 1 3 4999700 4999700 0 9938 1065 10390 24654;24655;24656 19802;19803 19802 2 306630 0 NADLNAQTVVK ESSDFNERRERDEKKNADLNAQTVVKVGEN DEKKNADLNAQTVVKVGENVLPPKREIAKR K N A V K V 2 0 2 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1171.6197 Q9Y520 Q9Y520 1516 1526 PRRC2C Protein PRRC2C yes yes 2 3.6365E-08 202.96 By MS/MS By matching 1.33 0.471 2 1 2 1 1881200 1845300 35816 9939 2905 10391 24657;24658;24659 19804;19805 19804 2 525180 35816 NADMSEEMQQDSVECATQALEK ______________________________ MQQDSVECATQALEKYNIEKDIAAHIKKEF K N A E K Y 3 0 1 2 1 3 4 0 0 0 1 1 2 0 0 2 1 0 0 1 0 0 22 0 2513.0356 P63167 P63167 10 31 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 3 2.116E-08 219.61 By MS/MS 10 0 1 1 478310 478310 0 9940 1196 10392 24660 19806 19806 693;694 1 25779 0 NAEAVLQSPGLSGK KFKNWDDVLTVDYTRNAEAVLQSPGLSGKV RNAEAVLQSPGLSGKVKRDAEKKDQMKADL R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 5.7222E-11 229.56 By MS/MS 3 0 1 1 699070 699070 0 9941 1348 10393 24661 19807 19807 1 12791 0 NAEIGNKDIK MQLDFRTPPGFDRTRNAEIGNKDIKFKHLE FDRTRNAEIGNKDIKFKHLEEAFTSEHWLV R N A I K F 1 0 2 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 10 1 1100.5826 Q8TCJ2 Q8TCJ2 743 752 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.032474 120.27 By MS/MS 1.5 0.5 1 1 2 368410 368410 0 9942 1991 10394 24662;24663 19808 19808 1 108070 0 NAEKYAEEDRR SSGGLSKDDIENMVKNAEKYAEEDRRKKER NMVKNAEKYAEEDRRKKERVEAVNMAEGII K N A R R K 2 2 1 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 11 2 1379.643 P38646 P38646 564 574 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 1.2797E-05 182.16 By MS/MS 5.8 0.748 2 2 1 5 15910000 15910000 0 9943 850 10395 24664;24665;24666;24667;24668 19809;19810;19811 19810 3 157480 0 NAELDPVTTEEQVLDVK AYIQESATFLEDTYRNAELDPVTTEEQVLD ELDPVTTEEQVLDVKGYLSKVRGISEVLAR R N A V K G 1 0 1 2 0 1 3 0 0 0 2 1 0 0 1 0 2 0 0 3 0 0 17 0 1898.9473 O95140 O95140 63 79 MFN2 Mitofusin-2 yes yes 2 1.0633E-16 255.72 By MS/MS 4.5 0.5 1 1 2 1871700 1871700 0 9944 386 10396 24669;24670 19812 19812 1 33225 0 NAELEKDAQNR PEEGLEVWKNWAQTKNAELEKDAQNRLAPI AQTKNAELEKDAQNRLAPIGRRQLLRFQED K N A N R L 2 1 2 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1286.6215 Q2TAL8 Q2TAL8 490 500 QRICH1 Glutamine-rich protein 1 yes yes 2 6.3732E-06 187.16 By MS/MS 4 0 1 1 583300 583300 0 9945 1571 10397 24671 19813 19813 1 54893 0 NAENAIEALK LILVANAIVGVWQERNAENAIEALKEYEPE VWQERNAENAIEALKEYEPEMGKVYRQDRK R N A L K E 3 0 2 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1071.556 P16615;O14983 P16615 111 120 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 1.3986E-07 187.99 By MS/MS 3 1.41 1 1 1 1 1 5 7730100 7730100 0 9946 635 10398 24672;24673;24674;24675;24676 19814;19815;19816 19814 3 1341700 0 NAEPLINLDVNNPDFK DLVPDNSKTADNATKNAEPLINLDVNNPDF AEPLINLDVNNPDFKAGVMALANLLQIQRH K N A F K A 1 0 4 2 0 0 1 0 0 1 2 1 0 1 2 0 0 0 0 1 0 0 16 0 1811.9054 Q9Y224 Q9Y224 116 131 C14orf166 UPF0568 protein C14orf166 yes yes 2 7.9005E-11 228.93 By MS/MS 8 0 1 1 940400 940400 0 9947 2809 10399 24677 19817 19817 1 11872 0 NAEQYKDQADK KKLKDVLLQVDDERRNAEQYKDQADKASTR DERRNAEQYKDQADKASTRLKQLKRQLEEA R N A D K A 2 0 1 2 0 2 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 11 1 1308.5946 P35579 P35579 1857 1867 MYH9 Myosin-9 yes yes 2 1.4674E-06 199.68 By MS/MS 2 0 1 1 175340 175340 0 9948 824 10400 24678 19818 19818 1 59306 0 NAEQYKDQADKASTR KKLKDVLLQVDDERRNAEQYKDQADKASTR NAEQYKDQADKASTRLKQLKRQLEEAEEEA R N A T R L 3 1 1 2 0 2 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 15 2 1723.8125 P35579 P35579 1857 1871 MYH9 Myosin-9 yes yes 3 0.0011569 116.58 By MS/MS 2.5 0.5 1 1 2 2006100 2006100 0 9949 824 10401 24679;24680 19819;19820 19819 2 557800 0 NAESNAELK RWPKKSAEFLLHMLKNAESNAELKGLDVDS LLHMLKNAESNAELKGLDVDSLVIEHIQVN K N A L K G 2 0 2 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 974.46689 P18621 P18621 97 105 RPL17 60S ribosomal protein L17 yes yes 2 0.0033587 112.11 By MS/MS By matching 9.33 0.471 2 1 2 1 5471600 5399300 72246 9950 654 10402 24681;24682;24683 19821 19821 1 109790 164740 NAFYIGSYQQCINEAQR ASGGSGEVDELFDVKNAFYIGSYQQCINEA FYIGSYQQCINEAQRVKLSSPERDVERDVF K N A Q R V 2 1 2 0 1 3 1 1 0 2 0 0 0 1 0 1 0 0 2 0 0 0 17 0 2060.9374 O14579 O14579 24 40 COPE Coatomer subunit epsilon yes yes 2 1.0208E-33 309.49 By MS/MS 8 0 1 1 2539000 2539000 0 9951 127 10403 24684 19822 19822 1 32055 0 NAGNCLSPAVIVGLLK PKGTIQVITQGTSLKNAGNCLSPAVIVGLL AGNCLSPAVIVGLLKEASKQADVNLVNAKL K N A L K E 2 0 2 0 1 0 0 2 0 1 3 1 0 0 1 1 0 0 0 2 0 0 16 0 1624.8971 O43175 O43175 365 380 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.0040361 104.81 By MS/MS 6 0 2 2 2114200 2114200 0 9952 195 10404 24685;24686 19823;19824 19823 2 14534 0 NAGNEQDLGIQYK LVQLKVVEDGILKLRNAGNEQDLGIQYKAL LRNAGNEQDLGIQYKALKPEVDKLNIMAAK R N A Y K A 1 0 2 1 0 2 1 2 0 1 1 1 0 0 0 0 0 0 1 0 0 0 13 0 1448.6896 P35221 P35221 166 178 CTNNA1 Catenin alpha-1 yes yes 2 0.00029643 152.69 By MS/MS 4 0 1 1 1572400 1572400 0 9953 812 10405 24687 19825 19825 1 147970 0 NAGVEGSLIVEK IIKRTLKIPAMTIAKNAGVEGSLIVEKIMQ IAKNAGVEGSLIVEKIMQSSSEVGYDAMAG K N A E K I 1 0 1 0 0 0 2 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1214.6507 P10809 P10809 482 493 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 1.1518E-06 199.8 By MS/MS By MS/MS 6.5 1.96 1 2 3 1 1 1 1 8 2 181510000 180780000 727920 9954 569 10406 24688;24689;24690;24691;24692;24693;24694;24695;24696;24697 19826;19827;19828;19829;19830;19831;19832;19833;19834;19835;19836 19831 11 1370000 723710 NAIDDGCVVPGAGAVEVAMAEALIK TQIKDAVRDGLRAVKNAIDDGCVVPGAGAV GAGAVEVAMAEALIKHKPSVKGRAQLGVQA K N A I K H 6 0 1 2 1 0 2 3 0 2 1 1 1 0 1 0 0 0 0 4 0 0 25 0 2469.2243 P40227 P40227 400 424 CCT6A T-complex protein 1 subunit zeta yes yes 3 7.3845E-06 111.11 By MS/MS 6 0 1 1 194450 194450 0 9955 858 10407 24698 19837;19838 19837 2 1336.7 0 NAIEHPVR SVPLTFIGAYFGFKKNAIEHPVRTNQIPRQ AYFGFKKNAIEHPVRTNQIPRQIPEQSFYT K N A V R T 1 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 8 0 934.49846 Q99805 Q99805 496 503 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 2 0.037654 87.181 By MS/MS 1.5 0.5 1 1 2 555360 555360 0 9956 2269 10408 24699;24700 19839 19839 1 160990 0 NAILEELPR KTMAAGDPANLRNARNAILEELPRTVNTMA NLRNARNAILEELPRTVNTMALLWNVLRKE R N A P R T 1 1 1 0 0 0 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 9 0 1053.5819 Q9Y3R5 Q9Y3R5 1618 1626 DOPEY2 Protein dopey-2 yes yes 2 0.010375 104.01 By MS/MS 2 0 1 1 223820 223820 0 9957 2883 10409 24701 19840 19840 1 75704 0 NAIQIVQQAVK GCCLDISSMIKEAQKNAIQIVQQAVKYVGQ EAQKNAIQIVQQAVKYVGQLAVLKGSKLHF K N A V K Y 2 0 1 0 0 3 0 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 11 0 1210.7034 Q15058 Q15058 1373 1383 KIF14 Kinesin-like protein KIF14 yes yes 2 2.5346E-05 158.87 By MS/MS 2 0 1 1 132950 132950 0 9958 1486 10410 24702 19841 19841 1 44971 0 NAITSSYSSTR SLTGAYTSGIPSSSRNAITSSYSSTRGISQ SSSRNAITSSYSSTRGISQLWKRNGPSSSP R N A T R G 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 4 2 0 1 0 0 0 11 0 1185.5626 A8CG34;Q96HA1 A8CG34 388 398 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 2 0.01518 95.618 By MS/MS 3 0 1 1 192100 192100 0 9959 28 10411 24703 19842 19842 1 3515 0 NAIVVLIPK KGIVSEEAYILFVRKNAIVVLIPKYGLEGT ILFVRKNAIVVLIPKYGLEGTVFFEEKDKP K N A P K Y 1 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 0 0 0 2 0 0 9 0 965.62735 Q9Y2L1 Q9Y2L1 858 866 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.013605 94.114 By MS/MS 5.5 1.12 1 1 1 1 4 2295800 2295800 0 9960 2834 10412 24704;24705;24706;24707 19843 19843 1 162640 0 NALANPLYCPDYR PQTHVIENLHAAAYRNALANPLYCPDYRIG YRNALANPLYCPDYRIGKVTSEELHYFVQN R N A Y R I 2 1 2 1 1 0 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 0 13 0 1565.7297 P22695 P22695 184 196 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 2.6961E-05 184.24 By MS/MS 7 0 1 1 10811000 10811000 0 9961 696 10413 24708 19844 19844 1 169710 0 NALANQSDCVLHR LSREQKYEDGIALLRNALANQSDCVLHRIL LRNALANQSDCVLHRILGDFLVAVNEYQEA R N A H R I 2 1 2 1 1 1 0 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1496.7154 Q9UJX3 Q9UJX3 501 513 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2;3 1.9876E-05 174.4 By MS/MS 5.33 0.471 2 1 3 3573400 3573400 0 9962 2752 10414 24709;24710;24711 19845;19846 19846 2 30405 0 NALDLLLPK TSCYVGDNTDLIILRNALDLLLPKLARVIS DLIILRNALDLLLPKLARVISRLADFAKER R N A P K L 1 0 1 1 0 0 0 0 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 995.60153 P30566 P30566 126 134 ADSL Adenylosuccinate lyase yes yes 2 1.9788E-05 177.3 By MS/MS 6.5 0.5 1 1 2 1616800 1616800 0 9963 776 10415 24712;24713 19847;19848 19847 2 12164 0 NALESYAFNMK YKAEDEVQRERVSAKNALESYAFNMKSAVE VSAKNALESYAFNMKSAVEDEGLKGKISEA K N A M K S 2 0 2 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 11 0 1286.5965 P0DMV9;P0DMV8 P0DMV9 540 550 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 2.0865E-18 251.56 By MS/MS By MS/MS 5.6 0.8 3 1 1 4 1 20291000 20181000 110410 9964 550 10416;10417 24714;24715;24716;24717;24718 19849;19850;19851 19850 243 3 200950 92722 NALGPGLSPELGPLPALR LAQGLPQLHSLVLRRNALGPGLSPELGPLP GPGLSPELGPLPALRVLDLSGNALEALPPG R N A L R V 2 1 1 0 0 0 1 3 0 0 5 0 0 0 4 1 0 0 0 0 0 0 18 0 1770.9992 Q8N1G4 Q8N1G4 85 102 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 4.2419E-07 209.11 By MS/MS 5.5 0.5 1 1 2 972150 972150 0 9965 1906 10418 24719;24720 19852 19852 1 8674.4 0 NALLLLPEEQQDPK AIPVASMEFAAICLRNALLLLPEEQQDPKQ RNALLLLPEEQQDPKQENGAKNSNQLGGNT R N A P K Q 1 0 1 1 0 2 2 0 0 0 4 1 0 0 2 0 0 0 0 0 0 0 14 0 1606.8566 Q9H9A5 Q9H9A5 467 480 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 2 0.00082893 128.28 By MS/MS 4.5 0.5 1 1 2 1176300 1176300 0 9966 2483 10419 24721;24722 19853;19854 19854 2 44996 0 NALLQLTDSQIADVAR VESVFDIMEMEDEERNALLQLTDSQIADVA ALLQLTDSQIADVARFCNRYPNIELSYEVV R N A A R F 3 1 1 2 0 2 0 0 0 1 3 0 0 0 0 1 1 0 0 1 0 0 16 0 1726.9214 O75643 O75643 1994 2009 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 7.7441E-07 203.7 By MS/MS 1.5 0.5 1 1 2 120710 120710 0 9967 340 10420 24723;24724 19855;19856 19855 2 34044 0 NALNVLQR FQEVLGRKDKADSTRNALNVLQRFKFLFNL DKADSTRNALNVLQRFKFLFNLPLNIERNI R N A Q R F 1 1 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 926.52976 Q96KP1 Q96KP1 272 279 EXOC2 Exocyst complex component 2 yes yes 2 0.001959 158.12 By MS/MS 4 0 1 1 1637900 1637900 0 9968 2189 10421 24725 19857 19857 1 154140 0 NALQQENHIIDGVK RGLGWVQFSSEEGLRNALQQENHIIDGVKV RNALQQENHIIDGVKVQVHTRRPKLPQTSD R N A V K V 1 0 2 1 0 2 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 0 14 0 1577.8162 Q9GZT3 Q9GZT3 75 88 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 6.3534E-11 227.48 By MS/MS 10 0 2 2 9679500 9679500 0 9969 2398 10422 24726;24727 19858;19859 19858 2 521690 0 NALSSLWGK EYLYFFRVLVPATDRNALSSLWGKLASEIL VPATDRNALSSLWGKLASEILMQNWDAAME R N A G K L 1 0 1 0 0 0 0 1 0 0 2 1 0 0 0 2 0 1 0 0 0 0 9 0 974.51853 P60228 P60228 164 172 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00081457 137.05 By MS/MS 7 0.816 1 1 1 3 19714000 19714000 0 9970 1090 10423 24728;24729;24730 19860;19861 19860 2 144910 0 NALVSHLDGTTPVCEDIGR SATESEVARGKNILRNALVSHLDGTTPVCE SHLDGTTPVCEDIGRSLLTYGRRIPLAEWE R N A G R S 1 1 1 2 1 0 1 2 1 1 2 0 0 0 1 1 2 0 0 2 0 0 19 0 2052.9899 P31930 P31930 397 415 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2;3 7.1536E-05 188.9 By MS/MS 6.5 0.5 2 2 4 5788500 5788500 0 9971 788 10424 24731;24732;24733;24734 19862;19863;19864 19862 3 48484 0 NAPCILFIDEIDAVGR VGPARVRDLFALARKNAPCILFIDEIDAVG APCILFIDEIDAVGRKRGRGNFGGQSEQEN K N A G R K 2 1 1 2 1 0 1 1 0 3 1 0 0 1 1 0 0 0 0 1 0 0 16 0 1801.9033 Q9Y4W6 Q9Y4W6 399 414 AFG3L2 AFG3-like protein 2 yes yes 2 0.00061241 128.35 By MS/MS 5 0 1 1 59229 59229 0 9972 2902 10425 24735 19865;19866 19866 2 594.04 0 NAPNDASYDAVR ENVNSLLPVFEEFLKNAPNDASYDAVRQSV FLKNAPNDASYDAVRQSVVVLMGSLAKHLD K N A V R Q 3 1 2 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 12 0 1291.5793 Q92616 Q92616 1305 1316 GCN1L1 Translational activator GCN1 yes yes 2 0.0037058 107.34 By MS/MS 2.5 1.12 1 1 1 1 4 3049600 3049600 0 9973 2064 10426 24736;24737;24738;24739 19867;19868 19867 2 839730 0 NAPPFLEDPSQLPPK GVGILLTRYTAQQFRNAPPFLEDPSQLPPK NAPPFLEDPSQLPPKDGTPAPGYPSYQQYH R N A P K D 1 0 1 1 0 1 1 0 0 0 2 1 0 1 5 1 0 0 0 0 0 0 15 0 1648.8461 O60830 O60830 143 157 TIMM17B Mitochondrial import inner membrane translocase subunit Tim17-B yes yes 2 0.0040079 106.26 By MS/MS 9 0 1 1 479770 479770 0 9974 281 10427 24740 19869 19869 1 9441.9 0 NAPVTFIVDGAVVK CAKCGLPLFYQSQPKNAPVTFIVDGAVVKF KNAPVTFIVDGAVVKFGQGFGKTNIYTQKQ K N A V K F 2 0 1 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 0 4 0 0 14 0 1428.7977 Q9H5V9 Q9H5V9 108 121 CXorf56 UPF0428 protein CXorf56 yes yes 2 3.1832E-05 200.21 By MS/MS 8 0 1 1 970120 970120 0 9975 2454 10428 24741 19870 19870 1 12248 0 NAQAIEDMVGYAQETQHEK EAAGLALGLVMLGSKNAQAIEDMVGYAQET IEDMVGYAQETQHEKILRGLAVGIALVMYG K N A E K I 3 0 1 1 0 3 3 1 1 1 0 1 1 0 0 0 1 0 1 1 0 0 19 0 2160.9746 Q99460 Q99460 525 543 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 3.7712E-25 299.17 By MS/MS 4.75 0.829 2 1 1 4 4863300 4863300 0 9976 2246 10429 24742;24743;24744;24745 19871;19872 19872 2 384690 0 NAQAQQEFK AACRSFQRALELDHKNAQAQQEFKNANAVM LELDHKNAQAQQEFKNANAVMEYEKIAETD K N A F K N 2 0 1 0 0 3 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 9 0 1062.5094 Q99615 Q99615 129 137 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.029442 105.1 By MS/MS 6 0 1 1 2159100 2159100 0 9977 2253 10430 24746 19873 19873 0 14842 0 NAQNPSLHHPR GELYQWKWSESEPYRNAQNPSLHHPRATFL EPYRNAQNPSLHHPRATFLGLTNEKIVLLS R N A P R A 1 1 2 0 0 1 0 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 11 0 1269.6327 O95071 O95071 403 413 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0013375 114.86 By MS/MS 2 0.816 1 1 1 3 168280 168280 0 9978 384 10431 24747;24748;24749 19874 19874 1 32187 0 NASELFPAVVK LDAMKRIVGMIAKGKNASELFPAVVKNVAS AKGKNASELFPAVVKNVASKNIEIKKLVYV K N A V K N 2 0 1 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 11 0 1173.6394 O00203 O00203 75 85 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.005702 102.06 By MS/MS 4 0.816 1 1 1 3 764480 764480 0 9979 90 10432 24750;24751;24752 19875;19876 19875 2 52635 0 NASNDIVR NHGGDIIDYLLNQLKNASNDIVRHGGSLGL YLLNQLKNASNDIVRHGGSLGLGLAAMGTA K N A V R H 1 1 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 8 0 887.44609 Q99460 Q99460 467 474 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0072877 114.89 By MS/MS 4 0 1 1 2896000 2896000 0 9980 2246 10433 24753 19877 19877 1 272530 0 NASQKEIKK PLAKEDYYQILGVPRNASQKEIKKAYYQLA ILGVPRNASQKEIKKAYYQLAKKYHPDTNK R N A K K A 1 0 1 0 0 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 0 9 2 1044.5928 Q96EY1 Q96EY1 103 111 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.004178 145.16 By MS/MS 7 0 1 1 189800 189800 0 9981 2150 10434 24754 19878 19878 1 2979.5 0 NASTFEDVTQVSSAYQK GFGGKYGVQKDRMDKNASTFEDVTQVSSAY STFEDVTQVSSAYQKTVPVEAVTSKTSNIR K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 2 9.4866E-05 219.84 By MS/MS 4.5 0.5 1 1 2 1337200 1337200 0 9982 1435 10435 24755;24756 19879 19879 1 40291 0 NASYYGNR EAYNYYTKAIDMCPKNASYYGNRAATLMML AIDMCPKNASYYGNRAATLMMLGRFREALG K N A N R A 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 8 0 943.41479 Q99615 Q99615 61 68 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.025598 93.429 By MS/MS 6 0 1 1 2762900 2762900 0 9983 2253 10436 24757 19880 19880 1 18993 0 NATAVTGR VAGLTLLAVGVYSAKNATAVTGRFIEARLG VGVYSAKNATAVTGRFIEARLGKPSLVRET K N A G R F 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 788.41407 Q5T9A4;Q5T2N8 Q5T9A4 266 273 ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 2 0.0044333 128.12 By MS/MS 5 0 1 1 3321000 3321000 0 9984 1638 10437 24758 19881 19881 1 33308 0 NATDAVGIVLK SPLGEVVEQGITRVRNATDAVGIVLKELKR TRVRNATDAVGIVLKELKRQSSLGMFHLLV R N A L K E 2 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1099.6237 P51398 P51398 235 245 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 4.5615E-09 206.49 By MS/MS 7.5 0.5 1 1 2 17584000 17584000 0 9985 993 10438 24759;24760 19882;19883 19882 2 272620 0 NATLVAGR VAGLTLLAVGVYSAKNATLVAGRFIEARLG VGVYSAKNATLVAGRFIEARLGKPSLVRET K N A G R F 2 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 800.45045 Q9NVI7 Q9NVI7 314 321 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.0060873 120.46 By MS/MS 6 1.41 1 1 1 1 1 5 14197000 14197000 0 9986 2598 10439 24761;24762;24763;24764;24765 19884 19884 1 168660 0 NAVEEYVYEFR MIMQDKLEKERNDAKNAVEEYVYEFRDKLC NDAKNAVEEYVYEFRDKLCGPYEKFICEQD K N A F R D 1 1 1 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 2 2 0 0 11 0 1417.6514 Q92598 Q92598 636 646 HSPH1 Heat shock protein 105 kDa yes yes 2 1.7008E-05 166.66 By MS/MS 4.5 0.5 1 1 2 833040 833040 0 9987 2059 10440 24766;24767 19885 19885 1 68037 0 NAVEEYVYEMR MIMQDKLEKERNDAKNAVEEYVYEMRDKLS NDAKNAVEEYVYEMRDKLSGEYEKFVSEDD K N A M R D 1 1 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 2 0 0 11 0 1401.6235 P34932 P34932 619 629 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 0.0044157 105.46 By MS/MS 4 0 1 1 411550 411550 0 9988 810 10441 24768 19886 19886 1 38729 0 NAVITVPAYFNDSQR KMKETAENYLGHTAKNAVITVPAYFNDSQR NAVITVPAYFNDSQRQATKDAGQISGLNVL K N A Q R Q 2 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 1 0 1 2 0 0 15 0 1693.8424 P38646 P38646 188 202 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.00023281 179.5 By MS/MS By MS/MS 6.67 1.83 4 1 1 1 1 1 8 1 67310000 67177000 133150 9989 850 10442 24769;24770;24771;24772;24773;24774;24775;24776;24777 19887;19888;19889;19890;19891;19892;19893;19894 19889 8 683410 111810 NAVLAIYTIYR AIRACLEHRHSYVRRNAVLAIYTIYRNFEH YVRRNAVLAIYTIYRNFEHLIPDAPELIHD R N A Y R N 2 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 1 0 2 1 0 0 11 0 1295.7238 P53618 P53618 154 164 COPB1 Coatomer subunit beta yes yes 2 2.1264E-05 191.4 By MS/MS 4.5 0.5 1 1 2 790380 790380 0 9990 1033 10443 24778;24779 19895 19895 1 59351 0 NAVLNTEAR RMQQYDLQGQPYGTRNAVLNTEARTMAAEV QPYGTRNAVLNTEARTMAAEVLSRRCVLMR R N A A R T 2 1 2 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 986.51451 Q969V3 Q969V3 65 73 NCLN Nicalin yes yes 2 0.0023887 116.37 By MS/MS By matching 6 0 2 1 1 3576500 3548400 28011 9991 2096 10444 24780;24781 19896 19896 1 24393 28704 NAVTQEFGPVPDTAR IGAINIENGKANSVRNAVTQEFGPVPDTAR NAVTQEFGPVPDTARYYKKHGIRWVVIGDE R N A A R Y 2 1 1 1 0 1 1 1 0 0 0 0 0 1 2 0 2 0 0 2 0 0 15 0 1600.7845 Q99798 Q99798 634 648 ACO2 Aconitate hydratase, mitochondrial yes yes 2 1.1207E-05 201.08 By MS/MS 4.5 0.5 1 1 2 2749700 2749700 0 9992 2268 10445 24782;24783 19897;19898 19897 2 149850 0 NAVVVITGATSGLGK LFRLLQWVRGKAYLRNAVVVITGATSGLGK NAVVVITGATSGLGKECAKVFYAAGAKLVL R N A G K E 2 0 1 0 0 0 0 3 0 1 1 1 0 0 0 1 2 0 0 3 0 0 15 0 1385.7878 Q6IAN0 Q6IAN0 52 66 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 0.00049932 148.68 By MS/MS 8 0 1 1 1534100 1534100 0 9993 1681 10446 24784 19899 19899 1 19368 0 NAVWALSNLCR LLQLFSKQNRLTMTRNAVWALSNLCRGKSP TMTRNAVWALSNLCRGKSPPPEFAKVSPCL R N A C R G 2 1 2 0 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 1 0 0 11 0 1302.6503 P52294;O60684;O15131 P52294 231 241 KPNA1;KPNA6;KPNA5 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7;Importin subunit alpha-6 yes no 2 0.00055732 130.41 By MS/MS 6 0 1 1 991760 991760 0 9994 1014 10447 24785 19900 19900 1 6817.6 0 NAWADNANACAK GQKLEEQDEFEKIYKNAWADNANACAKQYA IYKNAWADNANACAKQYAGTGALKTDFTRT K N A A K Q 5 0 3 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 12 0 1304.5568 Q9NTJ5 Q9NTJ5 436 447 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 8.5179E-05 157.97 By MS/MS 6 0 1 1 772200 772200 0 9995 2576 10448 24786 19901 19901 1 5308.3 0 NCDGVPALVR NISFGRDQDNKIAIKNCDGVPALVRLLRKA KIAIKNCDGVPALVRLLRKARDMDLTEVIT K N C V R L 1 1 1 1 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 10 0 1099.5444 O60716 O60716 449 458 CTNND1 Catenin delta-1 yes yes 2 0.032691 80.688 By MS/MS 4.5 0.5 1 1 2 1939500 1939500 0 9996 272 10449 24787;24788 19902 19902 1 161550 0 NCEPMIGLVPILK TIERNPYTIFHQALKNCEPMIGLVPILKGG LKNCEPMIGLVPILKGGRFYQVPVPLPDRR K N C L K G 0 0 1 0 1 0 1 1 0 2 2 1 1 0 2 0 0 0 0 1 0 0 13 0 1482.7938 Q9Y2R9 Q9Y2R9 151 163 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 1.3803E-05 193.3 By MS/MS 8.33 0.471 2 1 3 1987300 1987300 0 9997 2841 10450;10451 24789;24790;24791 19903;19904 19903 1184 2 25527 0 NCFASVFEK ASKDSIVHQAGMLKRNCFASVFEKYFQFQE AGMLKRNCFASVFEKYFQFQEEGKEGENRA R N C E K Y 1 0 1 0 1 0 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 9 0 1100.4961 O15144 O15144 119 127 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 2 0.0013614 129.42 By MS/MS 8 0 1 1 1127000 1127000 0 9998 163 10452 24792 19905 19905 1 14229 0 NCGCLGASPNLEQLQEENLK EEEIKSLTAEIDRLKNCGCLGASPNLEQLQ GASPNLEQLQEENLKLKYRLNILRKSLQAE K N C L K L 1 0 3 0 2 2 3 2 0 0 4 1 0 0 1 1 0 0 0 0 0 0 20 0 2273.0416 P54136 P54136 31 50 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 1.1415E-26 288.96 By MS/MS 5 0 1 1 970150 970150 0 9999 1043 10453 24793 19906 19906 1 9730.1 0 NCGQMSEIEAK YVKQKGERKIFQAHKNCGQMSEIEAKVRYV QAHKNCGQMSEIEAKVRYVKLARSLKTYGV K N C A K V 1 0 1 0 1 1 2 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 11 0 1265.538 Q9Y490 Q9Y490 285 295 TLN1 Talin-1 yes yes 2 0.00044676 132.32 By MS/MS 2 0 2 2 590040 590040 0 10000 2888 10454;10455 24794;24795 19907;19908 19907 1198 2 199580 0 NCIEIVNK QRAQFAEATQRLSERNCIEIVNKLIAQKQL TQRLSERNCIEIVNKLIAQKQLEVVHTLDG R N C N K L 0 0 2 0 1 0 1 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 8 0 988.50117 O94874 O94874 31 38 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.025855 93.143 By MS/MS 4.5 0.5 1 1 2 3685900 3685900 0 10001 372 10456 24796;24797 19909 19909 1 328970 0 NCISTVVHQGLIR VKVFLALAAKGPVLRNCISTVVHQGLIRIC LRNCISTVVHQGLIRICSKPVVLPKGPESE R N C I R I 0 1 1 0 1 1 0 1 1 2 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1495.7929 P78527 P78527 477 489 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0012966 120.77 By MS/MS 2 0 2 2 807860 807860 0 10002 1225 10457 24798;24799 19910;19911 19911 2 273250 0 NCIVLIDSTPYR NASNNELVRTKTLVKNCIVLIDSTPYRQWY LVKNCIVLIDSTPYRQWYESHYALPLGRKK K N C Y R Q 0 1 1 1 1 0 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1449.7286 P62241 P62241 99 110 RPS8 40S ribosomal protein S8 yes yes 2 4.859E-06 225.22 By MS/MS 8.5 1.12 1 1 1 1 4 21490000 21490000 0 10003 1143 10458 24800;24801;24802;24803 19912;19913;19914 19912 3 293750 0 NCLEVLPTK SASSGKCLMEVTVDRNCLEVLPTKMSYAAN EVTVDRNCLEVLPTKMSYAANLKNVMNMQN R N C T K M 0 0 1 0 1 0 1 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 9 0 1072.5587 O95071 O95071 2093 2101 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0046557 109.83 By MS/MS 2 0.816 1 1 1 3 890050 890050 0 10004 384 10459 24804;24805;24806 19915;19916 19916 2 193730 0 NCLTNFHGMDLTR AFRKFKLITEDVQGKNCLTNFHGMDLTRDK GKNCLTNFHGMDLTRDKMCSMVKKWQTMIE K N C T R D 0 1 2 1 1 0 0 1 1 0 2 0 1 1 0 0 2 0 0 0 0 0 13 0 1577.7079 P61247 P61247 95 107 RPS3A 40S ribosomal protein S3a yes yes 2;3 1.9351E-06 202.05 By MS/MS 8 0 2 2 6426200 6426200 0 10005 1118 10460 24807;24808 19917;19918 19918 635 2 81130 0 NCLVYSIPTNSSK LGDMIWEDLSECLIKNCLVYSIPTNSSKLQ IKNCLVYSIPTNSSKLQQYEEIIQSTEEFE K N C S K L 0 0 2 0 1 0 0 0 0 1 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1481.7184 O43264 O43264 345 357 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 1.0262E-05 196.16 By MS/MS 4.5 0.5 1 1 2 4450800 4450800 0 10006 200 10461 24809;24810 19919 19919 1 390020 0 NCPHVVVGTPGR FGGLSIKKDEEVLKKNCPHVVVGTPGRILA LKKNCPHVVVGTPGRILALVRNRSFSLKNV K N C G R I 0 1 1 0 1 0 0 2 1 0 0 0 0 0 2 0 1 0 0 3 0 0 12 0 1291.6455 O00148 O00148 163 174 DDX39A ATP-dependent RNA helicase DDX39A yes yes 3 0.050551 80.871 By MS/MS 6 0 1 1 564550 564550 0 10007 83 10462 24811 19920 19920 1 3880.9 0 NCPLIDNICAFAK AGEYVSLGKVEAALKNCPLIDNICAFAKSD LKNCPLIDNICAFAKSDQSYVISFVVPNQK K N C A K S 2 0 2 1 2 0 0 0 0 2 1 1 0 1 1 0 0 0 0 0 0 0 13 0 1534.7272 O60488 O60488 594 606 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 0.0492 69.65 By MS/MS 5 0 1 1 123600 123600 0 10008 257 10463 24812 19921 19921 0 1239.7 0 NCPPSPLPLISK CGLPSPISTNRQIQKNCPPSPLPLISKQSP IQKNCPPSPLPLISKQSPQTSFPYKIMPIQ K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 Q8IWC1 Q8IWC1 520 531 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.0083305 93.839 By MS/MS 3 0 1 1 690710 690710 0 10009 1866 10464 24813 19922 19922 1 12638 0 NCRDLLQSSYNK DWLILHIPDAHLWVKNCRDLLQSSYNKQRF WVKNCRDLLQSSYNKQRFDQPLEASTWLKN K N C N K Q 0 1 2 1 1 1 0 0 0 0 2 1 0 0 0 2 0 0 1 0 0 0 12 1 1496.7042 P51398 P51398 164 175 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.026922 73.273 By MS/MS 7 0 1 1 516350 516350 0 10010 993 10465 24814 19923 19923 1 8105.8 0 NCSSFLIK ______________________________ LQWMVVRNCSSFLIKRNKQTYSTEPNNLKA R N C I K R 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 8 0 967.4797 P46779 P46779 12 19 RPL28 60S ribosomal protein L28 yes yes 2 0.0043283 128.61 By MS/MS By matching 9.33 0.471 2 1 2 1 6653300 6577000 76357 10011 917 10466 24815;24816;24817 19924;19925 19924 2 150030 174120 NCVAIAADRR IMSYNGGAVMAMKGKNCVAIAADRRFGIQA AMKGKNCVAIAADRRFGIQAQMVTTDFQKI K N C R R F 3 2 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 10 1 1144.5771 P49720 P49720 18 27 PSMB3 Proteasome subunit beta type-3 yes yes 2 0.00070637 146.69 By MS/MS 9 0.816 1 1 1 3 2530600 2530600 0 10012 956 10467 24818;24819;24820 19926;19927;19928 19926 3 47434 0 NDALSMIIK LTDEELKKEAKNEAKNDALSMIIKSLKNLA AKNEAKNDALSMIIKSLKNLASRVPGQEET K N D I K S 1 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 9 0 1003.5372 Q93008;O00507 Q93008 304 312 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0048784 109.44 By MS/MS 2 0 1 1 191300 191300 0 10013 2085 10468 24821 19929 19929 1 64707 0 NDAPHKNTQEK NSISRYNGEPEHIERNDAPHKNTQEKFSLS HIERNDAPHKNTQEKFSLSQESSYIATQYS R N D E K F 1 0 2 1 0 1 1 0 1 0 0 2 0 0 1 0 1 0 0 0 0 0 11 1 1280.6109 Q14739 Q14739 142 152 LBR Lamin-B receptor yes yes 2 0.010962 111.27 By MS/MS 2 0 1 1 41187 41187 0 10014 1456 10469 24822 19930 19930 1 13931 0 NDEELNK KKTRIIPRHLQLAIRNDEELNKLLGKVTIA RHLQLAIRNDEELNKLLGKVTIAQGGVLPN R N D N K L 0 0 2 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 860.38758 Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P0C0S8;Q93077;P20671;Q96QV6;Q8IUE6;Q7L7L0;P04908;P16104 Q99878 90 96 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AC;HIST1H2AD;HIST1H2AA;HIST2H2AB;HIST3H2A;HIST1H2AB;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 1-D;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2AX yes no 2 0.0084389 141.52 By MS/MS 10 0 1 1 386260 386260 0 10015 546 10470 24823 19931 19931 1 20818 0 NDEELNKLLGK KKTRIIPRHLQLAIRNDEELNKLLGKVTIA LAIRNDEELNKLLGKVTIAQGGVLPNIQAV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P0C0S8;P20671 Q99878 90 100 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AD Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-D yes no 2 0.00011128 161.51 By MS/MS 10 0 1 1 580640 580640 0 10016 546 10471 24824 19932 19932 1 31295 0 NDELTSLAEETR HCEELEKQLIEFQHRNDELTSLAEETRALK QHRNDELTSLAEETRALKDEIDVLRATSDK R N D T R A 1 1 1 1 0 0 3 0 0 0 2 0 0 0 0 1 2 0 0 0 0 0 12 0 1376.642 Q9UJC3 Q9UJC3 289 300 HOOK1 Protein Hook homolog 1 yes yes 2 6.9506E-20 270.67 By MS/MS 4 0 1 1 946590 946590 0 10017 2745 10472 24825 19933 19933 1 89080 0 NDFTEEEEAQVR KGKTPEEIRKTFNIKNDFTEEEEAQVRKEN NIKNDFTEEEEAQVRKENQWCEEK______ K N D V R K 1 1 1 1 0 1 4 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 12 0 1465.6321 P63208 P63208 143 154 SKP1 S-phase kinase-associated protein 1 yes yes 2 9.4202E-34 305.74 By MS/MS 9.5 0.5 1 1 2 3573800 3573800 0 10018 1198 10473 24826;24827 19934;19935 19935 2 105600 0 NDGAAILAAVSSIAQK AKKPMVVLGSSALQRNDGAAILAAVSSIAQ DGAAILAAVSSIAQKIRMTSGVTGDWKVMN R N D Q K I 5 0 1 1 0 1 0 1 0 2 1 1 0 0 0 2 0 0 0 1 0 0 16 0 1527.8257 P28331 P28331 484 499 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 5.145E-07 211.13 By MS/MS 5.5 0.5 1 1 2 512790 512790 0 10019 753 10474 24828;24829 19936;19937 19936 2 4195.5 0 NDGVLLLQALTR SRLMDLLADSREVIRNDGVLLLQALTRSNG VIRNDGVLLLQALTRSNGAIQKIVAFENAF R N D T R S 1 1 1 1 0 1 0 1 0 0 4 0 0 0 0 0 1 0 0 1 0 0 12 0 1311.751 O60763 O60763 184 195 USO1 General vesicular transport factor p115 yes yes 2 0.00016206 152.96 By MS/MS 4 0 1 1 64591 64591 0 10020 276 10475 24830 19938 19938 1 6078.4 0 NDIASHPPVEGSYAPR VETGTQLEKLMENMRNDIASHPPVEGSYAP DIASHPPVEGSYAPRRGEFCIAKFVDGEWY R N D P R R 2 1 1 1 0 0 1 1 1 1 0 0 0 0 3 2 0 0 1 1 0 0 16 0 1708.8169 Q7KZF4 Q7KZF4 716 731 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.0038322 111.81 By MS/MS 4 0 1 1 1293300 1293300 0 10021 1755 10476 24831 19939 19939 0 121710 0 NDIDFFR VKRHNLIVASYDVVRNDIDFFRNIKFNYCI VASYDVVRNDIDFFRNIKFNYCILDEGHVI R N D F R N 0 1 1 2 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 7 0 925.42938 O14981 O14981 1388 1394 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.018431 113.5 By MS/MS 2 0 1 1 163820 163820 0 10022 154 10477 24832 19940 19940 1 55412 0 NDIFEDAGILCQR VDVYIKQCQEGAYLRNDIFEDAGILCQRVN LRNDIFEDAGILCQRVNKQVGDIFSNPETV R N D Q R V 1 1 1 2 1 1 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1549.7195 O00471 O00471 244 256 EXOC5 Exocyst complex component 5 yes yes 2;3 2.5476E-05 185.3 By MS/MS 5 0 2 2 1029700 1029700 0 10023 108 10478 24833;24834 19941;19942;19943 19941 3 10327 0 NDIHTLLK WLEYRVTQVDGHSSKNDIHTLLKDLNSYLE VDGHSSKNDIHTLLKDLNSYLEDKVYLTGY K N D L K D 0 0 1 1 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 8 0 952.53418 O43324 O43324 89 96 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.00035906 162.25 By MS/MS 9.5 0.5 1 1 2 5196900 5196900 0 10024 204 10479 24835;24836 19944 19944 1 121840 0 NDIVNMLVGNK KLDNWLNELETYCTRNDIVNMLVGNKIDKE YCTRNDIVNMLVGNKIDKENREVDRNEGLK R N D N K I 0 0 3 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 2 0 0 11 0 1215.6282 Q9NP72 Q9NP72 113 123 RAB18 Ras-related protein Rab-18 yes yes 2 0.0035347 107.79 By MS/MS 9 0 1 1 70697 70697 0 10025 2524 10480 24837 19945 19945 1 1391.3 0 NDKSEEEQSSSSVK EKIEKEQSKQAVEMKNDKSEEEQSSSSVKK KNDKSEEEQSSSSVKKDETNVKMESEGGAD K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 P07910 P07910 230 243 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 2.7116E-32 305.3 By MS/MS 7 0 1 1 587590 587590 0 10026 514 10481 24838 19946 19946 1 9224.1 0 NDLAVVDVR SAPELKTGISDVFAKNDLAVVDVRIGMTRK SDVFAKNDLAVVDVRIGMTRKFGYVDFESA K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 999.53491 P19338 P19338 334 342 NCL Nucleolin yes yes 2 0.0024416 115.7 By MS/MS 4.5 0.5 1 1 2 2440200 2440200 0 10027 659 10482 24839;24840 19947 19947 1 188080 0 NDLEEAFIHFMGK LSPGNGKDHSILHSRNDLEEAFIHFMGKGA SRNDLEEAFIHFMGKGAAAERFFSDKETFH R N D G K G 1 0 1 1 0 0 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 13 0 1549.7235 Q9BRR6 Q9BRR6 113 125 ADPGK ADP-dependent glucokinase yes yes 2 0.024168 82.543 By MS/MS 6 0 1 1 87760 87760 0 10028 2298 10483 24841 19948 19948 1 603.28 0 NDNDTFTVK VVGPAEADIDFDIIRNDNDTFTVKYTPRGA DFDIIRNDNDTFTVKYTPRGAGSYTIMVLF R N D V K Y 0 0 2 2 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 1 0 0 9 0 1052.4775 P21333 P21333 829 837 FLNA Filamin-A no no 2 0.00011249 159.79 By MS/MS 2 0.816 1 1 1 3 706460 706460 0 10029 677 10484 24842;24843;24844 19949;19950 19949 2 181840 0 NDPQQLLLDAK TVAFIRTIQAQLQERNDPQQLLLDAKHMFP LQERNDPQQLLLDAKHMFPVLFPFNPSSLT R N D A K H 1 0 1 2 0 2 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1253.6616 Q9ULV0 Q9ULV0 1805 1815 MYO5B Unconventional myosin-Vb yes yes 2 0.00022678 140.78 By MS/MS By MS/MS 2 0 2 1 1 348960 219710 129250 10030 2775 10485 24845;24846 19951;19952 19952 2 74315 182780 NDSEQFAALLLVTK NPTLERYLGALREAKNDSEQFAALLLVTKA KNDSEQFAALLLVTKAVKAGDIDAKTRRRI K N D T K A 2 0 1 1 0 1 1 0 0 0 3 1 0 1 0 1 1 0 0 1 0 0 14 0 1547.8195 Q9UBB6 Q9UBB6 48 61 NCDN Neurochondrin yes yes 2 3.3569E-11 237.32 By MS/MS 5 0 1 1 92621 92621 0 10031 2694 10486 24847 19953 19953 1 928.94 0 NDSLESTGLGLSSSR LFDYYLYAIYTFFGRNDSLESTGLGLSSSR NDSLESTGLGLSSSRLRTTLNRIQESLIDL R N D S R L 0 1 1 1 0 0 1 2 0 0 3 0 0 0 0 5 1 0 0 0 0 0 15 0 1521.7271 Q96JG6 Q96JG6 657 671 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 6.6195E-13 201.3 By MS/MS 4 0 1 1 0 0 0 10032 2178 10487 24848 19954 19954 1 0 0 NDSPTQIPVSSDVCR FQSNALPTLSASGARNDSPTQIPVSSDVCR NDSPTQIPVSSDVCRLTPA___________ R N D C R L 0 1 1 2 1 1 0 0 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1673.7679 Q8TC07 Q8TC07 673 687 TBC1D15 TBC1 domain family member 15 yes yes 2 7.8498E-08 240.18 By MS/MS 5 0 1 1 1841000 1841000 0 10033 1987 10488 24849 19955 19955 1 18465 0 NDSQHLFIEPR SGDEKGVVFCYWFNRNDSQHLFIEPRTIFC WFNRNDSQHLFIEPRTIFCLTCSPHHEDLV R N D P R T 0 1 1 1 0 1 1 0 1 1 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1354.663 Q8TEQ6 Q8TEQ6 142 152 GEMIN5 Gem-associated protein 5 yes yes 3 0.0078204 92.943 By MS/MS 3 0 1 1 469720 469720 0 10034 2002 10489 24850 19956 19956 1 8594.6 0 NDSVVAGGGAIEMELSK RSLHDAIMIVRRAIKNDSVVAGGGAIEMEL SVVAGGGAIEMELSKYLRDYSRTIPGKQQL K N D S K Y 2 0 1 1 0 0 2 3 0 1 1 1 1 0 0 2 0 0 0 2 0 0 17 0 1675.8087 Q99832 Q99832 402 418 CCT7 T-complex protein 1 subunit eta yes yes 2 1.0633E-16 255.72 By MS/MS 6 0 1 1 3124600 3124600 0 10035 2270 10490 24851 19957 19957 1 21480 0 NDTKEDVFVHQTAIKK VKWFNVRNGYGFINRNDTKEDVFVHQTAIK DTKEDVFVHQTAIKKNNPRKYLRSVGDGET R N D K K N 1 0 1 2 0 1 1 0 1 1 0 3 0 1 0 0 2 0 0 2 0 0 16 2 1871.9741 P67809;P16989 P67809 78 93 YBX1;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3 yes no 3 0.0002594 138.28 By MS/MS 6.5 0.5 1 1 2 843520 843520 0 10036 1206 10491 24852;24853 19958 19958 1 7187.9 0 NDTVTPAELSELR KEPLRSVLQYNSAMKNDTVTPAELSELRST MKNDTVTPAELSELRSTIINLLDPPPEVSA K N D L R S 1 1 1 1 0 0 2 0 0 0 2 0 0 0 1 1 2 0 0 1 0 0 13 0 1443.7205 P42356 P42356 853 865 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 2.9522E-05 182.41 By MS/MS 2.5 0.5 1 1 2 338010 338010 0 10037 880 10492 24854;24855 19959 19959 1 87202 0 NEAKNDALSMIIK FLENLTDEELKKEAKNEAKNDALSMIIKSL AKNEAKNDALSMIIKSLKNLASRVPGQEET K N E I K S 2 0 2 1 0 0 1 0 0 2 1 2 1 0 0 1 0 0 0 0 0 0 13 1 1445.7548 Q93008;O00507 Q93008 300 312 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 3 0.035401 85.536 By MS/MS 2 0 1 1 120590 120590 0 10038 2085 10493 24856 19960 19960 1 40787 0 NECVVVIR RRRIRSINKLIRIGRNECVVVIRVDKEKGY KLIRIGRNECVVVIRVDKEKGYIDLSKRRV R N E I R V 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 987.51715 P05198 P05198 68 75 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.0037987 131.06 By MS/MS 7.5 0.5 1 1 2 4029400 4029400 0 10039 489 10494 24857;24858 19961 19961 1 62334 0 NECVVVIRVDKEK RRRIRSINKLIRIGRNECVVVIRVDKEKGY GRNECVVVIRVDKEKGYIDLSKRRVSPEEA R N E E K G 0 1 1 1 1 0 2 0 0 1 0 2 0 0 0 0 0 0 0 4 0 0 13 2 1586.845 P05198 P05198 68 80 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 3 0.040652 69.352 By MS/MS 7 0 1 1 762500 762500 0 10040 489 10495 24859 19962 19962 1 11970 0 NEDITEPQSILAAAEK LEKASRELWMRVWSRNEDITEPQSILAAAE EDITEPQSILAAAEKAGMSAEQAQGLLEKI R N E E K A 3 0 1 1 0 1 3 0 0 2 1 1 0 0 1 1 1 0 0 0 0 0 16 0 1727.8578 Q9Y2Q3 Q9Y2Q3 129 144 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 1.4117E-16 290.64 By MS/MS 8.5 0.5 1 1 2 1479700 1479700 0 10041 2837 10496 24860;24861 19963 19963 1 20537 0 NEDLNAEDVYSR YLLGSDAAALLFNSKNEDLNAEDVYSRLTT NSKNEDLNAEDVYSRLTTPVFGKGVAYDVP K N E S R L 1 1 2 2 0 0 2 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1423.6216 Q16850 Q16850 122 133 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 4.0522E-25 284.1 By MS/MS 6 0 1 1 4587600 4587600 0 10042 1561 10497 24862 19964 19964 1 31536 0 NEEDAAELVALAQAVNAR LHQFCAQHGRPPRPRNEEDAAELVALAQAV DAAELVALAQAVNARALPAVQQNNLDEDLI R N E A R A 6 1 2 1 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 18 0 1882.9385 P22314 P22314 351 368 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 3 4.072E-11 229.68 By MS/MS 4 0 1 1 222950 222950 0 10043 691 10498 24863 19965 19965 1 20981 0 NEETLREEEEEK SNKEIMEHIRKILGKNEETLREEEEEKKQL LGKNEETLREEEEEKKQLSHPANFGPRKYC K N E E K K 0 1 1 0 0 0 7 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 12 1 1533.6795 P82663 P82663 109 120 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2;3 9.119E-13 279.9 By MS/MS 9 0 2 2 1379400 1379400 0 10044 1230 10499 24864;24865 19966;19967 19967 2 27146 0 NEETLREEEEEKK SNKEIMEHIRKILGKNEETLREEEEEKKQL GKNEETLREEEEEKKQLSHPANFGPRKYCL K N E K K Q 0 1 1 0 0 0 7 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 13 2 1661.7744 P82663 P82663 109 121 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2;3 5.2881E-11 241.39 By MS/MS 9 0 2 2 4448500 4448500 0 10045 1230 10500 24866;24867 19968;19969 19969 2 87547 0 NEFNLESK DSGVGKSNLLSRFTRNEFNLESKSTIGVEF LLSRFTRNEFNLESKSTIGVEFATRSIQVD R N E S K S 0 0 2 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 8 0 979.46108 P62491;Q15907 P62491 34 41 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0066583 117.81 By MS/MS 9 0 1 1 982810 982810 0 10046 1161 10501 24868 19970 19970 1 19342 0 NEGFFALYK SGYTGTLDCLLQTWKNEGFFALYKGFWPNW LLQTWKNEGFFALYKGFWPNWLRLGPWNII K N E Y K G 1 0 1 0 0 0 1 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1087.5338 Q5SVS4 Q5SVS4 255 263 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 0.0014448 128.36 By MS/MS 8 0 1 1 395650 395650 0 10047 1622 10502 24869 19971 19971 1 4995.1 0 NEGNIFPNPEATFVK YLRINFYCPGSALGRNEGNIFPNPEATFVK NEGNIFPNPEATFVKEITYRASNIKAPGEQ R N E V K E 1 0 3 0 0 0 2 1 0 1 0 1 0 2 2 0 1 0 0 1 0 0 15 0 1675.8206 Q9Y5B9 Q9Y5B9 582 596 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00044461 137.81 By MS/MS 1.5 0.5 1 1 2 538950 538950 0 10048 2909 10503 24870;24871 19972;19973 19973 2 154950 0 NEGSESAPEGQAQQR RNYQQNYQNSESGEKNEGSESAPEGQAQQR NEGSESAPEGQAQQRRPYRRRRFPPYYMRR K N E Q R R 2 1 1 0 0 3 3 2 0 0 0 0 0 0 1 2 0 0 0 0 0 0 15 0 1586.6921 P67809 P67809 171 185 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 2 3.0434E-33 310.34 By MS/MS 7 0 1 1 413050 413050 0 10049 1206 10504 24872 19974 19974 1 6484.1 0 NEGTATYAAAVLFR AEGASAPLMELLHSRNEGTATYAAAVLFRI RNEGTATYAAAVLFRISEDKNPDYRKRVSV R N E F R I 4 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 2 0 1 1 0 0 14 0 1482.7467 P14923 P14923 638 651 JUP Junction plakoglobin yes yes 2 3.5654E-39 303.33 By MS/MS By MS/MS 5 3.32 2 1 1 1 1 2 5 3 3228500 2093600 1134800 10050 621 10505 24873;24874;24875;24876;24877;24878;24879;24880 19975;19976;19977;19978;19979 19975 5 121180 342980 NEGVATYAAAVLFR AEGATAPLTELLHSRNEGVATYAAAVLFRM RNEGVATYAAAVLFRMSEDKPQDYKKRLSV R N E F R M 4 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 2 0 0 14 0 1480.7674 P35222 P35222 648 661 CTNNB1 Catenin beta-1 yes yes 2 0.00043055 142.12 By MS/MS 4 0 1 1 86709 86709 0 10051 813 10506 24881 19980 19980 1 8159.9 0 NEIASVAYR NFPNPNPFVEDDMDKNEIASVAYRYRRWKL EDDMDKNEIASVAYRYRRWKLGDDIDLIVR K N E Y R Y 2 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1021.5193 O15371 O15371 351 359 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.00094065 134.77 By MS/MS 5 0 1 1 1495100 1495100 0 10052 185 10507 24882 19981 19981 1 14996 0 NELEIPGQYDGR ECSPWMSDFKVEFLRNELEIPGQYDGRGKP FLRNELEIPGQYDGRGKPLPEYHVRIAGFD R N E G R G 0 1 1 1 0 1 2 2 0 1 1 0 0 0 1 0 0 0 1 0 0 0 12 0 1389.6525 P78527 P78527 3697 3708 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.133E-05 163.9 By MS/MS 2.5 1.12 1 1 1 1 4 5840500 5840500 0 10053 1225 10508 24883;24884;24885;24886 19982;19983;19984;19985 19983 4 1111500 0 NELESYAYSLK FAEEDKKLKERIDTRNELESYAYSLKNQIG IDTRNELESYAYSLKNQIGDKEKLGGKLSS R N E L K N 1 0 1 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 2 0 0 0 11 0 1315.6296 P11021 P11021 563 573 HSPA5 78 kDa glucose-regulated protein yes yes 2 2.0908E-18 252.14 By MS/MS By matching 5 0 2 1 1 8615200 8527900 87317 10054 571 10509 24887;24888 19986 19986 1 85531 73327 NELFLPGR RNVYRMLFKSKAYERNELFLPGRMAYVVDL KSKAYERNELFLPGRMAYVVDLDDEYADTD R N E G R M 0 1 1 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 8 0 944.50797 Q13123 Q13123 229 236 IK Protein Red yes yes 2 0.0026677 136.75 By MS/MS 5 0 1 1 1037700 1037700 0 10055 1354 10510 24889 19987 19987 1 10408 0 NELQLVDLPTGR LSFATSTPNNMGLVRNELQLVDLPTGRSIA LVRNELQLVDLPTGRSIAFRGERGNDESAI R N E G R S 0 1 1 1 0 1 1 1 0 0 3 0 0 0 1 0 1 0 0 1 0 0 12 0 1353.7252 Q9BZH6 Q9BZH6 545 556 WDR11 WD repeat-containing protein 11 yes yes 2 1.3711E-14 248.21 By MS/MS 2.5 1.12 1 1 1 1 4 780860 780860 0 10056 2379 10511 24890;24891;24892;24893 19988 19988 1 146090 0 NELSGALTGLTR RELPLRLADFGVLHRNELSGALTGLTRVRR LHRNELSGALTGLTRVRRFQQDDAHIFCAM R N E T R V 1 1 1 0 0 0 1 2 0 0 3 0 0 0 0 1 2 0 0 0 0 0 12 0 1230.6568 P26639 P26639 443 454 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 1.9531E-08 205.02 By MS/MS 4.5 0.5 1 1 2 1360300 1360300 0 10057 734 10512 24894;24895 19989;19990 19990 2 57316 0 NENLQNLLCGSGAGVISK LKHLYKWAIPAEGKKNENLQNLLCGSGAGV LQNLLCGSGAGVISKTLTYPLDLFKKRLQV K N E S K T 1 0 3 0 1 1 1 3 0 1 3 1 0 0 0 2 0 0 0 1 0 0 18 0 1872.9364 Q9HC21 Q9HC21 214 231 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 2.9746E-24 272.96 By MS/MS 8 0 1 1 599070 599070 0 10058 2509 10513 24896 19991 19991 1 7563.2 0 NEPLTFAWLR FVCSSLLQFARQYSRNEPLTFAWLRRYIKW RQYSRNEPLTFAWLRRYIKWPLLPPKNIKD R N E L R R 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 1 1 0 0 0 0 10 0 1245.6506 Q8IYB8 Q8IYB8 600 609 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00099995 122.94 By MS/MS 5 0 1 1 109650 109650 0 10059 1885 10514 24897 19992;19993 19993 2 1099.7 0 NEPQNATGAPGR NVNEIFMAIAKKLPKNEPQNATGAPGRNRG LPKNEPQNATGAPGRNRGVDLQENNPASRS K N E G R N 2 1 2 0 0 1 1 2 0 0 0 0 0 0 2 0 1 0 0 0 0 0 12 0 1210.5691 P51148 P51148 185 196 RAB5C Ras-related protein Rab-5C yes yes 2 3.2195E-06 193.3 By MS/MS 9 0 1 1 607890 607890 0 10060 989 10515 24898 19994 19994 1 11963 0 NEQDAYAINSYTR GSCAENTAKKLNIARNEQDAYAINSYTRSK ARNEQDAYAINSYTRSKAAWEAGKFGNEVI R N E T R S 2 1 2 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 2 0 0 0 13 0 1543.6903 P24752 P24752 209 221 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 6.3208E-47 291.22 By MS/MS 7 0 1 1 0 0 0 10061 716 10516 24899 19995 19995 1 0 0 NEQLTLHDERFEK SRFTEYSMTSSVMRRNEQLTLHDERFEKFY RRNEQLTLHDERFEKFYEQYDDDEIGALDN R N E E K F 0 1 1 1 0 1 3 0 1 0 2 1 0 1 0 0 1 0 0 0 0 0 13 1 1657.806 Q96GA3 Q96GA3 253 265 LTV1 Protein LTV1 homolog yes yes 3 0.0085237 88.552 By MS/MS 5 0 1 1 2214600 2214600 0 10062 2157 10517 24900 19996 19996 1 22211 0 NESGTWIQYGEEK PANSVFTTKWIWYWKNESGTWIQYGEEKDK WKNESGTWIQYGEEKDKRKNSNVDSSYLES K N E E K D 0 0 1 0 0 1 3 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 13 0 1539.6842 Q7Z2W4 Q7Z2W4 613 625 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 4.4156E-25 291.22 By MS/MS 4.5 0.5 1 1 2 1902500 1902500 0 10063 1778 10518 24901;24902 19997 19997 1 139370 0 NESSLASTLK PDKAALNALQPPEFRNESSLASTLKTLLFF PPEFRNESSLASTLKTLLFFTALMITVPIG R N E L K T 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 10 0 1048.5401 Q3ZAQ7 Q3ZAQ7 19 28 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 0.0060354 103.26 By MS/MS 10 0 1 1 947380 947380 0 10064 1579 10519 24903 19998 19998 1 51060 0 NESTPPSEELELDKWK QRYMSSKIPAVTYPKNESTPPSEELELDKW ESTPPSEELELDKWKTTMKSSVQEECVSTI K N E W K T 0 0 1 1 0 0 4 0 0 0 2 2 0 0 2 2 1 1 0 0 0 0 16 1 1900.9054 Q7L0Y3 Q7L0Y3 52 67 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 0.0047168 94.09 By MS/MS 7 0 1 1 1770600 1770600 0 10065 1759 10520 24904 19999 19999 1 27795 0 NESVPEVEALLAR SNRKKETELLGSFSKNESVPEVEALLARLR SKNESVPEVEALLARLRAL___________ K N E A R L 2 1 1 0 0 0 3 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 13 0 1425.7464 Q9NSV4 Q9NSV4 1177 1189 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.0051318 103.21 By MS/MS 3 0 1 1 73287 73287 0 10066 2573 10521 24905 20000;20001 20001 2 1340.9 0 NETSAPFK PTSGSKEKTKVEATKNETSAPFKERPTPSL TKVEATKNETSAPFKERPTPSLNNNCTTSE K N E F K E 1 0 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 892.42905 P07814 P07814 726 733 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.027723 91.069 By MS/MS 3.5 0.5 1 1 2 2112400 2112400 0 10067 512 10522 24906;24907 20002 20002 1 76710 0 NEVLMVNIGSLSTGGR TEGDKKAAKVQKLSKNEVLMVNIGSLSTGG EVLMVNIGSLSTGGRVSAVKADLGKIVLTN K N E G R V 0 1 2 0 0 0 1 3 0 1 2 0 1 0 0 2 1 0 0 2 0 0 16 0 1645.8458 P41091;Q2VIR3 P41091 401 416 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 1.4349E-16 254.45 By MS/MS 6.33 0.471 2 1 3 4329200 4329200 0 10068 866 10523;10524 24908;24909;24910 20003;20004 20003 455 2 33134 0 NEVVGLIFR ______________________________ SRPLSRNEVVGLIFRLTIFGAVTYFTIKWM R N E F R L 0 1 1 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 1045.592 Q8NBU5 Q8NBU5 14 22 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 4.2898E-05 172.94 By MS/MS 7 0 1 1 560310 560310 0 10069 1945 10525 24911 20005 20005 1 8795.8 0 NFAEPGSEVYLR LMAHNGWVMGDDPLRNFAEPGSEVYLRREL PLRNFAEPGSEVYLRRELICWGDSVKLRYG R N F L R R 1 1 1 0 0 0 2 1 0 0 1 0 0 1 1 1 0 0 1 1 0 0 12 0 1380.6674 P35573 P35573 470 481 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0033202 108.47 By MS/MS 3 0 1 1 367220 367220 0 10070 823 10526 24912 20006 20006 1 6719.1 0 NFDFEDVFVK SNVVINLIGRDWETKNFDFEDVFVKIPQAI DWETKNFDFEDVFVKIPQAIAQLSKEAGVE K N F V K I 0 0 1 2 0 0 1 0 0 0 0 1 0 3 0 0 0 0 0 2 0 0 10 0 1258.587 Q16795 Q16795 138 147 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 1.3186E-07 188.87 By MS/MS 7.5 0.5 1 1 2 385070 385070 0 10071 1559 10527 24913;24914 20007 20007 1 5961.1 0 NFEALNAR LSPMQKKYYKYILTRNFEALNARGGGNQVS YKYILTRNFEALNARGGGNQVSLLNVVMDL R N F A R G 2 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 933.46683 Q14839 Q14839 993 1000 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.0072877 115.49 By MS/MS 2 0.816 1 1 1 3 4050700 4050700 0 10072 1459 10528 24915;24916;24917 20008 20008 1 1061600 0 NFEDVAFDEK PEDWDKQPVKVLVGKNFEDVAFDEKKNVFV VLVGKNFEDVAFDEKKNVFVEFYAPWCGHC K N F E K K 1 0 1 2 0 0 2 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 10 0 1212.5299 P07237 P07237 376 385 P4HB Protein disulfide-isomerase yes yes 2 0.040575 85.533 By MS/MS 6 0 1 1 917390 917390 0 10073 507 10529 24918 20009 20009 0 6306.3 0 NFEIAFK SDYIFLTTVLSTPQRNFEIAFKMFDLNGDG TVLSTPQRNFEIAFKMFDLNGDGEVDMEEF R N F F K M 1 0 1 0 0 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 867.44905 Q9BPX6 Q9BPX6 222 228 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 0.025783 107.9 By MS/MS 6.5 0.5 1 1 2 1037200 1037200 0 10074 2281 10530 24919;24920 20010 20010 1 10596 0 NFELNLK ALQSALKLRQQLQAKNFELNLKTYHALLKM LRQQLQAKNFELNLKTYHALLKMAAKCADL K N F L K T 0 0 2 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 876.47052 O75127 O75127 242 248 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.013694 125.81 By MS/MS 5 0 1 1 508120 508120 0 10075 293 10531 24921 20011 20011 1 5096.1 0 NFGASLLLPGLK HCLAKKTDFSWEEERNFGASLLLPGLKQKN EERNFGASLLLPGLKQKNSVGFSSQLYGYA R N F L K Q 1 0 1 0 0 0 0 2 0 0 4 1 0 1 1 1 0 0 0 0 0 0 12 0 1228.718 Q92552 Q92552 203 214 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 1.5257E-06 198.62 By MS/MS 7 0 1 1 722890 722890 0 10076 2054 10532 24922 20012 20012 1 11348 0 NFGDQPDIR PSGVLICSENYITYKNFGDQPDIRCPIPRR NYITYKNFGDQPDIRCPIPRRRNDLDDPER K N F I R C 0 1 1 2 0 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 9 0 1060.4938 Q15393 Q15393 260 268 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.013438 94.409 By MS/MS 2 0.816 1 1 1 3 589020 589020 0 10077 1508 10533 24923;24924;24925 20013;20014 20014 2 115340 0 NFGEDMDDERLKDLFGK ELGARAKEFTNVYIKNFGEDMDDERLKDLF GEDMDDERLKDLFGKFGPALSVKVMTDESG K N F G K F 0 1 1 4 0 0 2 2 0 0 2 2 1 2 0 0 0 0 0 0 0 0 17 2 2027.9259 P11940;Q9H361 P11940 197 213 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 3 0.0097372 91.845 By MS/MS 5 0 1 1 1163100 1163100 0 10078 586 10534 24926 20015 20015 273 1 11665 0 NFGGTVSIIPVGEAK QLSGVLIADDHCTIKNFGGTVSIIPVGEAK NFGGTVSIIPVGEAKTYVNGKHILEITVLR K N F A K T 1 0 1 0 0 0 1 3 0 2 0 1 0 1 1 1 1 0 0 2 0 0 15 0 1487.7984 Q15058 Q15058 854 868 KIF14 Kinesin-like protein KIF14 yes yes 2 0.00038569 173.19 By MS/MS 2.5 0.5 1 1 2 263530 263530 0 10079 1486 10535 24927;24928 20016 20016 1 75293 0 NFGIGQDIQPK EAKKVVNPLFEKRPKNFGIGQDIQPKRDLT KRPKNFGIGQDIQPKRDLTRFVKWPRYIRL K N F P K R 0 0 1 1 0 2 0 2 0 2 0 1 0 1 1 0 0 0 0 0 0 0 11 0 1215.6248 P62424 P62424 38 48 RPL7A 60S ribosomal protein L7a yes yes 2 0.00014069 148.32 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 13167000 13079000 88187 10080 1160 10536 24929;24930;24931 20017;20018;20019 20019 3 166840 119000 NFGSYVTHETK FDKKYNPTWHCIVGRNFGSYVTHETKHFIY IVGRNFGSYVTHETKHFIYFYLGQVAILLF R N F T K H 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 2 0 1 1 0 0 11 0 1281.599 P63167;Q96FJ2 P63167 61 71 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 2 5.3567E-07 206.73 By MS/MS 10 0 1 1 388450 388450 0 10081 1196 10537 24932 20020 20020 1 20936 0 NFIAQGPYENR SDDLLYLEFLQKFERNFIAQGPYENRTVFE KFERNFIAQGPYENRTVFETLDIGWQLLRI R N F N R T 1 1 2 0 0 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 11 0 1307.6258 P21281 P21281 461 471 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 0.00052204 131.12 By MS/MS 6 0 1 1 2814400 2814400 0 10082 675 10538 24933 20021 20021 1 19347 0 NFILDQTNVSAAAQR QCLGKFIEIAARKKRNFILDQTNVSAAAQR NFILDQTNVSAAAQRRKMCLFAGFQRKAVV R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q00839 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 3.6795E-70 373.94 By MS/MS 4 0.816 1 1 1 3 6126900 6126900 0 10083 1264 10539 24934;24935;24936 20022;20023 20023 2 510520 0 NFIQYFHK QYEQQTYQVIPEVIKNFIQYFHKTVSDLID VIPEVIKNFIQYFHKTVSDLIDQKVYELQA K N F H K T 0 0 1 0 0 1 0 0 1 1 0 1 0 2 0 0 0 0 1 0 0 0 8 0 1095.5502 Q9Y262 Q9Y262 54 61 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 4.7627E-05 168.74 By MS/MS 6 0.816 1 1 1 3 3955800 3955800 0 10084 2814 10540 24937;24938;24939 20024 20024 1 38464 0 NFKENVIRPILK NLGDVQISDKITISKNFKENVIRPILKAHF ISKNFKENVIRPILKAHFRRDEFLGRINEI K N F L K A 0 1 2 0 0 0 1 0 0 2 1 2 0 1 1 0 0 0 0 1 0 0 12 2 1469.8718 Q9H078 Q9H078 539 550 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.0093446 90.05 By MS/MS 6 0 1 1 4000300 4000300 0 10085 2402 10541 24940 20025 20025 1 27499 0 NFMIDTYR GKNKSKTPEIYLAYRNFMIDTYRLNPQEYL EIYLAYRNFMIDTYRLNPQEYLTSTACRRN R N F Y R L 0 1 1 1 0 0 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 0 8 0 1058.4855 Q92922;Q8TAQ2 Q92922 492 499 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 2 0.011188 109.01 By MS/MS 3 0 1 1 271050 271050 0 10086 2079;1976 10542 24941 20026 20026 965 1 4959.5 0 NFNETFLKR LKQEMNRLFGATNPKNFNETFLKRNSDSLP GATNPKNFNETFLKRNSDSLPHRLSAAKMV K N F K R N 0 1 2 0 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 9 1 1167.6037 Q9BXJ9 Q9BXJ9 749 757 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.039371 97.798 By MS/MS 4 0 1 1 1151100 1151100 0 10087 2357 10543 24942 20027 20027 1 108330 0 NFNLENR ______________________________ ALVIRGIRNFNLENRAEREISKMKPSVAPR R N F N R A 0 1 3 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 905.43553 Q9P032 Q9P032 11 17 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.018465 113.41 By MS/MS 9.5 0.5 1 1 2 5932400 5932400 0 10088 2660 10544 24943;24944 20028 20028 1 119900 0 NFQEEQINTR AYPTVKFYFYERAKRNFQEEQINTRDAKAI ERAKRNFQEEQINTRDAKAIAALISEKLET R N F T R D 0 1 2 0 0 2 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 10 0 1277.6 Q8IXB1 Q8IXB1 757 766 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 1.6072E-14 225.87 By MS/MS By matching 5.75 1.92 1 2 1 3 1 2545100 2508500 36564 10089 1874 10545 24945;24946;24947;24948 20029;20030;20031 20030 3 79487 30706 NFSDNQLQEGK GDPNWFPKKSKENPRNFSDNQLQEGKNVIG ENPRNFSDNQLQEGKNVIGLQMGTNRGASQ R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 P37802 P37802 161 171 TAGLN2 Transgelin-2 yes yes 2 3.2948E-09 211.86 By MS/MS 9 0 1 1 762320 762320 0 10090 846 10546 24949 20032 20032 1 15003 0 NFSEVFQK RKYEAIQLTFKQVSKNFSEVFQKLVPGGKA TFKQVSKNFSEVFQKLVPGGKATLVMKKGD K N F Q K L 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 8 0 997.4869 Q9UQE7 Q9UQE7 1039 1046 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00774 113.26 By MS/MS 3 0 1 1 1405800 1405800 0 10091 2807 10547 24950 20033 20033 1 25723 0 NFSGAELEGLVR LSADVDIKELAVETKNFSGAELEGLVRAAQ ETKNFSGAELEGLVRAAQSTAMNRHIKAST K N F V R A 1 1 1 0 0 0 2 2 0 0 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1290.6568 P46459 P46459 435 446 NSF Vesicle-fusing ATPase yes yes 2 8.8433E-13 271.21 By MS/MS 5.5 1.12 1 1 1 1 4 13140000 13140000 0 10092 912 10548 24951;24952;24953;24954 20034;20035;20036 20034 3 139360 0 NFSNMDDEENYSAASK RAQKGELLERLSSARNFSNMDDEENYSAAS FSNMDDEENYSAASKAVRQVLHQLKRLGIV R N F S K A 2 0 3 2 0 0 2 0 0 0 0 1 1 1 0 3 0 0 1 0 0 0 16 0 1820.7159 O43264 O43264 609 624 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.8994E-70 363.37 By MS/MS 4 0 2 2 3670200 3670200 0 10093 200 10549;10550 24955;24956 20037;20038;20039 20039 101 3 345390 0 NFSTVDIQK FRVTCKEEKVLRNNKNFSTVDIQKNGVKFT VLRNNKNFSTVDIQKNGVKFTNSKLTSLNE K N F Q K N 0 0 1 1 0 1 0 0 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 0 1050.5346 P43246 P43246 538 546 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.026461 86.136 By MS/MS 4 0 1 1 1462200 1462200 0 10094 894 10551 24957 20040 20040 1 137600 0 NFVDSPIIVDITK WNLALNPEGGPNWVRNFVDSPIIVDITKDT VRNFVDSPIIVDITKDTFYKQPMFYHLGHF R N F T K D 0 0 1 2 0 0 0 0 0 3 0 1 0 1 1 1 1 0 0 2 0 0 13 0 1459.7922 P04062 P04062 435 447 GBA Glucosylceramidase yes yes 2 2.5544E-05 185.25 By MS/MS 6 0 1 1 560070 560070 0 10095 466 10552 24958 20041 20041 1 3850.1 0 NFVLVLSPGALDK GKFEDKLIQSVMGARNFVLVLSPGALDKCM ARNFVLVLSPGALDKCMQDHDCKDWVHKEI R N F D K C 1 0 1 1 0 0 0 1 0 0 3 1 0 1 1 1 0 0 0 2 0 0 13 0 1371.7762 Q6SZW1 Q6SZW1 616 628 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.00032192 150.06 By MS/MS 5 0 1 1 163690 163690 0 10096 1726 10553 24959 20042 20042 1 1641.8 0 NFYDSPEK HWEYYKHPISRWIARNFYDSPEKIYERTMA ISRWIARNFYDSPEKIYERTMAVLQIEAEK R N F E K I 0 0 1 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 8 0 998.43453 O43674 O43674 124 131 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 0.0053054 124.08 By MS/MS 9.5 0.5 1 1 2 1418200 1418200 0 10097 223 10554 24960;24961 20043 20043 1 61184 0 NFYDSPEKIYER HWEYYKHPISRWIARNFYDSPEKIYERTMA IARNFYDSPEKIYERTMAVLQIEAEKAELR R N F E R T 0 1 1 1 0 0 2 0 0 1 0 1 0 1 1 1 0 0 2 0 0 0 12 1 1559.7256 O43674 O43674 124 135 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 0.00041417 158.06 By MS/MS 9.5 0.5 1 1 2 564870 564870 0 10098 223 10555 24962;24963 20044 20044 1 20944 0 NGAVQTIAQR RYGFLWPGLNVPLMKNGAVQTIAQRSKEEQ VPLMKNGAVQTIAQRSKEEQEKVEADMIQQ K N G Q R S 2 1 1 0 0 2 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1056.5676 P82675 P82675 151 160 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 1.7286E-07 198.61 By MS/MS 7 0 1 1 3028900 3028900 0 10099 1233 10556 24964 20045 20045 1 47549 0 NGDGVVDIGELQEGLR EQPTRYETLFQALDRNGDGVVDIGELQEGL GDGVVDIGELQEGLRNLGIPLGQDAEEKIF R N G L R N 0 1 1 2 0 1 2 4 0 1 2 0 0 0 0 0 0 0 0 2 0 0 16 0 1669.8271 Q6NUK1 Q6NUK1 34 49 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 8.9419E-05 188.09 By MS/MS 7 0 1 1 678640 678640 0 10100 1687 10557 24965 20046 20046 1 10654 0 NGDILLLNR APKPQGTKIVCRHVKNGDILLLNRQPTLHR VCRHVKNGDILLLNRQPTLHRPSIQAHRAR K N G N R Q 0 1 2 1 0 0 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 9 0 1026.5822 O95602 O95602 544 552 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.0139 93.598 By MS/MS 2.5 0.5 1 1 2 223890 223890 0 10101 418 10558 24966;24967 20047 20047 1 49114 0 NGDYLCVK RNLFNVVDCKLHWQKNGDYLCVKVDRTPKG CKLHWQKNGDYLCVKVDRTPKGTQGVVTNF K N G V K V 0 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 8 0 967.44332 P55884 P55884 522 529 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.00038522 160.88 By MS/MS By matching 4 1.67 1 2 1 1 4 1 14848000 14769000 79308 10102 1065 10559 24968;24969;24970;24971;24972 20048;20049;20050 20049 3 1186700 168980 NGEFFMSPNDFVTR AELRTIFLKYASIEKNGEFFMSPNDFVTRY KNGEFFMSPNDFVTRYLNIFGESQPNPKTV K N G T R Y 0 1 2 1 0 0 1 1 0 0 0 0 1 3 1 1 1 0 0 1 0 0 14 0 1659.7351 Q9UJS0 Q9UJS0 30 43 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 1.4287E-16 255.41 By MS/MS 5 0 2 2 2578400 2578400 0 10103 2748 10560;10561 24973;24974 20051;20052 20051 1161 1 25861 0 NGETVPIDEQFDKEK RNTIQWLENELNRWRNGETVPIDEQFDKEK NGETVPIDEQFDKEKANLEAFTVDKDITLT R N G E K A 0 0 1 2 0 1 3 1 0 1 0 2 0 1 1 0 1 0 0 1 0 0 15 1 1747.8265 P33176 P33176 370 384 KIF5B Kinesin-1 heavy chain yes yes 2 0.0029963 158.86 By MS/MS 4 0 1 1 674890 674890 0 10104 800 10562 24975 20053 20053 1 63511 0 NGFVVLK GASATFPMQCSALRKNGFVVLKGRPCKIVE MQCSALRKNGFVVLKGRPCKIVEMSTSKTG K N G L K G 0 0 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 2 0 0 7 0 775.45922 P63241;Q6IS14;Q9GZV4 P63241 28 34 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 2 0.0010437 175.93 By MS/MS 9.5 0.5 1 1 2 6192400 6192400 0 10105 1201 10563 24976;24977 20054;20055 20055 2 304970 0 NGGIYEGVFK ILTSVVGSKCEVQVKNGGIYEGVFKTYSPK EVQVKNGGIYEGVFKTYSPKCDLVLDAAHE K N G F K T 0 0 1 0 0 0 1 3 0 1 0 1 0 1 0 0 0 0 1 1 0 0 10 0 1082.5397 Q99700 Q99700 286 295 ATXN2 Ataxin-2 yes yes 2 0.00072902 128.86 By MS/MS 3 0 1 1 314330 314330 0 10106 2258 10564 24978 20056 20056 1 5751.3 0 NGGVVTTAFYDPR EVQLASELAIAAIEKNGGVVTTAFYDPRSL EKNGGVVTTAFYDPRSLDIVCKPVPFFLRG K N G P R S 1 1 1 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 1 2 0 0 13 0 1395.6783 Q9P015 Q9P015 170 182 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.00036485 168.85 By MS/MS 8.5 0.5 1 1 2 3911200 3911200 0 10107 2659 10565 24979;24980 20057 20057 1 50644 0 NGHLAVVAPR IDFTPGSELLITKAKNGHLAVVAPRLNSR_ ITKAKNGHLAVVAPRLNSR___________ K N G P R L 2 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 2 0 0 10 0 1032.5829 O00159 O00159 1050 1059 MYO1C Unconventional myosin-Ic yes yes 2 0.048864 72.879 By MS/MS 4 0 1 1 558330 558330 0 10108 85 10566 24981 20058 20058 1 52543 0 NGIDILVGTPGR FYGGTPYGGQFERMRNGIDILVGTPGRIKD RMRNGIDILVGTPGRIKDHIQNGKLDLTKL R N G G R I 0 1 1 1 0 0 0 3 0 2 1 0 0 0 1 0 1 0 0 1 0 0 12 0 1210.667 Q9NR30;Q9BQ39 Q9NR30 307 318 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 yes no 2 0.0013296 119.03 By MS/MS 4 0 1 1 241980 241980 0 10109 2545 10567 24982 20059 20059 1 22772 0 NGKEVATDVR TLQPGDDVEFTIKDRNGKEVATDVRLLPQG TIKDRNGKEVATDVRLLPQGTVIFEDISIE R N G V R L 1 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 2 0 0 10 1 1087.5622 O75534 O75534 237 246 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.042314 97.565 By MS/MS 4 0 1 1 631230 631230 0 10110 333 10568 24983 20060 20060 1 59403 0 NGLAAELGPASPR CPAKPDGGGAPNGVRNGLAAELGPASPRRA VRNGLAAELGPASPRRAGALRRNSLTGEEG R N G P R R 3 1 1 0 0 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 0 1251.6571 Q9BX95 Q9BX95 91 103 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.0086881 103.21 By MS/MS 2 0 1 1 83658 83658 0 10111 2355 10569 24984 20061 20061 0 28297 0 NGLDVLFK RIQNMRMIDGKPEYKNGLDVLFKVVRYEGF DGKPEYKNGLDVLFKVVRYEGFFSLWKGFT K N G F K V 0 0 1 1 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 904.50182 Q02978 Q02978 261 268 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.005383 123.72 By MS/MS 8 0 1 1 7457900 7457900 0 10112 1284 10570 24985 20062 20062 1 94155 0 NGLNLLR MELHMVLPAPDTDEKNGLNLLRRLWVVKFD PAPDTDEKNGLNLLRRLWVVKFDKEEEIRK K N G L R R 0 1 2 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 798.47119 Q92616 Q92616 1122 1128 GCN1L1 Translational activator GCN1 yes yes 2 0.016816 117.7 By MS/MS 2.5 0.5 1 1 2 294070 294070 0 10113 2064 10571 24986;24987 20063 20063 1 79423 0 NGLVLFGNDGK PLEIKGAKKPGLVTKNGLVLFGNDGKALTV LVTKNGLVLFGNDGKALTVRNLQFEDGKMI K N G G K A 0 0 2 1 0 0 0 3 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1132.5877 Q3SY69 Q3SY69 296 306 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.049142 70.412 By MS/MS 4 0 1 1 652130 652130 0 10114 1578 10572 24988 20064 20064 1 61370 0 NGNLPEFGDAISTASK KVLGEAMTGISQNAKNGNLPEFGDAISTAS GNLPEFGDAISTASKALCGFTEAAAQAAYL K N G S K A 2 0 2 1 0 0 1 2 0 1 1 1 0 1 1 2 1 0 0 0 0 0 16 0 1619.7791 Q9Y490 Q9Y490 1416 1431 TLN1 Talin-1 yes yes 2 0.00036741 169.58 By MS/MS 2.5 0.5 1 1 2 511140 511140 0 10115 2888 10573 24989;24990 20065 20065 1 148250 0 NGPLPIPSEGSGFTK LLAIAACTALGEIGRNGPLPIPSEGSGFTK NGPLPIPSEGSGFTKLHLVESLLSRIPSSK R N G T K L 0 0 1 0 0 0 1 3 0 1 1 1 0 1 3 2 1 0 0 0 0 0 15 0 1499.762 Q5VYK3 Q5VYK3 823 837 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.010047 83.226 By MS/MS 2.5 0.5 1 1 2 964140 964140 0 10116 1656 10574 24991;24992 20066;20067 20066 2 268700 0 NGQDLGVAFK FANFESDEVELSYAKNGQDLGVAFKISKEV LSYAKNGQDLGVAFKISKEVLAGRPLFPHV K N G F K I 1 0 1 1 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1047.5349 Q00839 Q00839 424 433 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.00045032 134.25 By MS/MS 4 0.816 1 1 1 3 1923400 1923400 0 10117 1264 10575 24993;24994;24995 20068;20069 20068 2 124870 0 NGQYAEASALYGR DSVEELRAAGNESFRNGQYAEASALYGRAL FRNGQYAEASALYGRALRVLQAQGSSDPEE R N G G R A 3 1 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 2 0 0 0 13 0 1398.6528 Q15785 Q15785 22 34 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 6.0189E-06 199.19 By MS/MS 8 0 1 1 478030 478030 0 10118 1532 10576 24996 20070 20070 1 6035 0 NGRVEIIANDQGNR GIDLGTTYSCVGVFKNGRVEIIANDQGNRI KNGRVEIIANDQGNRITPSYVAFTPEGERL K N G N R I 1 2 3 1 0 1 1 2 0 2 0 0 0 0 0 0 0 0 0 1 0 0 14 1 1554.7863 P11021 P11021 47 60 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.00076482 170.4 By MS/MS 5 0 2 2 4135100 4135100 0 10119 571 10577 24997;24998 20071;20072 20071 2 41473 0 NGVMPSHFSR AGVGSMTKIYGGRQRNGVMPSHFSRGSKSV GGRQRNGVMPSHFSRGSKSVARRVLQALEG R N G S R G 0 1 1 0 0 0 0 1 1 0 0 0 1 1 1 2 0 0 0 1 0 0 10 0 1130.5291 P39019 P39019 85 94 RPS19 40S ribosomal protein S19 yes yes 2;3 0.0089231 90.149 By MS/MS 10 0 3 3 5271800 5271800 0 10120 853 10578;10579 24999;25000;25001 20073;20074;20075 20074 439 3 284130 0 NGYAPVEFFLEGTR LYWAVFSEYVKTMLRNGYAPVEFFLEGTRS RNGYAPVEFFLEGTRSRSAKTLTPKFGLLN R N G T R S 1 1 1 0 0 0 2 2 0 0 1 0 0 2 1 0 1 0 1 1 0 0 14 0 1598.7729 O15228 O15228 233 246 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.00048389 155.86 By MS/MS 5 0 1 1 159030 159030 0 10121 171 10580 25002 20076;20077 20076 2 1595 0 NGYELSPTAAANFTR FAEYIQKNVQLYKMRNGYELSPTAAANFTR NGYELSPTAAANFTRRNLADCLRSRTPYHV R N G T R R 3 1 2 0 0 0 1 1 0 0 1 0 0 1 1 1 2 0 1 0 0 0 15 0 1610.7689 P49721 P49721 71 85 PSMB2 Proteasome subunit beta type-2 yes yes 2 1.7016E-07 219.97 By MS/MS 9 0.816 1 1 1 3 2697100 2697100 0 10122 957 10581 25003;25004;25005 20078;20079 20079 2 51419 0 NHAAPFSK HDSEDTEGVHEVFSRNHAAPFSKVLTFLRR VHEVFSRNHAAPFSKVLTFLRRGPFELEAF R N H S K V 2 0 1 0 0 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 8 0 870.4348 Q92598;P34932 Q92598 423 430 HSPH1;HSPA4 Heat shock protein 105 kDa;Heat shock 70 kDa protein 4 no no 2 0.002011 143.11 By MS/MS 4 0 1 1 1700300 1700300 0 10123 2059;810 10582 25006 20080 20080 1 160010 0 NHAIFSEDLENLK DVGIEDNQLGAFLTKNHAIFSEDLENLKTR TKNHAIFSEDLENLKTRVAYLHSKNFSKAD K N H L K T 1 0 2 1 0 0 2 0 1 1 2 1 0 1 0 1 0 0 0 0 0 0 13 0 1528.7522 Q96E29 Q96E29 212 224 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 9.3641E-05 174.23 By MS/MS 7 0 1 1 722450 722450 0 10124 2141 10583 25007 20081 20081 1 11341 0 NHDEESLECLCR LTEAIMHDCVVKLLKNHDEESLECLCRLLT LLKNHDEESLECLCRLLTTIGKDLDFEKAK K N H C R L 0 1 1 1 2 0 3 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1560.6297 Q04637;O43432 Q04637 926 937 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 8.7255E-34 306.48 By MS/MS 2.78 1.31 2 2 2 2 1 9 28058000 28058000 0 10125 1291;210 10584 25008;25009;25010;25011;25012;25013;25014;25015;25016 20082;20083;20084;20085;20086;20087;20088 20084 7 7419200 0 NHEEEMKDLR MQIESLTEELAYLKKNHEEEMKDLRNVSTG AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K N H L R N 0 1 1 1 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1299.5877 CON__P13645;P13645 CON__P13645 286 295 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.412E-06 182.46 By MS/MS By MS/MS 4.9 2.68 4 6 5 4 4 8 3 1 3 3 20 21 181760000 43857000 137900000 + 10126 50 10585;10586 25017;25018;25019;25020;25021;25022;25023;25024;25025;25026;25027;25028;25029;25030;25031;25032;25033;25034;25035;25036;25037;25038;25039;25040;25041;25042;25043;25044;25045;25046;25047;25048;25049;25050;25051;25052;25053;25054;25055;25056;25057 20089;20090;20091;20092;20093;20094;20095;20096;20097;20098;20099;20100;20101;20102;20103;20104;20105;20106;20107;20108;20109;20110;20111;20112;20113;20114;20115;20116;20117;20118;20119;20120;20121;20122 20106 35 34 3028700 28271000 NHEEEMLALR MQIEGLKEELAYLRKNHEEEMLALRGQTGG AYLRKNHEEEMLALRGQTGGDVNVEMDAAP K N H L R G 1 1 1 0 0 0 3 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 10 0 1240.587 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 254 263 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.0066121 101.46 By MS/MS By matching 3.5 0.5 1 1 1 1 566410 459810 106600 + 10127 47 10587 25058;25059 20123 20123 33 1 43271 13569 NHEEEMNALR MQIESLKEELAYLKKNHEEEMNALRGQVGG AYLKKNHEEEMNALRGQVGGDVNVEMDAAP K N H L R G 1 1 2 0 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1241.5459 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2 CON__P02533 252 261 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2;3 1.5529E-05 170.5 By MS/MS By MS/MS 3.1 1.45 2 1 3 3 1 3 7 3129700 2597000 532630 + 10128 39;57 10588;10589 25060;25061;25062;25063;25064;25065;25066;25067;25068;25069 20124;20125;20126;20127;20128;20129;20130 20126 21 6 270320 185700 NHEEEVNTLR SQVESLREELICLKKNHEEEVNTLRSPLGD ICLKKNHEEEVNTLRSPLGDRLNVEVDTAP K N H L R S 0 1 2 0 0 0 3 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1239.5844 CON__O76011;CON__Q8IUT8;O76011 CON__O76011 193 202 KRT34 Keratin, type I cuticular Ha4 no no 2 0.00057655 142.36 By MS/MS 10 0 1 1 238440 0 238440 + 10129 36 10590 25070 20131 20131 1 0 305270 NHIENQDECVLNVISHAR EGLPEKVLSLVDDPRNHIENQDECVLNVIS ENQDECVLNVISHARLWQTTEEIPKRETYC R N H A R L 1 1 3 1 1 1 2 0 2 2 1 0 0 0 0 1 0 0 0 2 0 0 18 0 2147.0178 Q9BZE1 Q9BZE1 145 162 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 3 0.00015371 174.19 By MS/MS 7.5 0.5 1 1 2 2673700 2673700 0 10130 2376 10591 25071;25072 20132 20132 1 40966 0 NHIQLVK AAYQTGADQASITARNHIQLVKLQVEEVHQ DQASITARNHIQLVKLQVEEVHQLSRKAET R N H V K L 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 850.50249 Q9NR28 Q9NR28 185 191 DIABLO Diablo homolog, mitochondrial yes yes 2 0.018013 114.59 By MS/MS 9 0 1 1 726350 726350 0 10131 2544 10592 25073 20133 20133 1 14295 0 NIAFFSTNCVEGTAR TRSPDFTNENPLETRNIAFFSTNCVEGTAR NIAFFSTNCVEGTARGIVVYTGDRTVMGRI R N I A R G 2 1 2 0 1 0 1 1 0 1 0 0 0 2 0 1 2 0 0 1 0 0 15 0 1685.7832 P05023 P05023 241 255 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 2.6214E-11 241.84 By MS/MS 2.5 1.12 1 1 1 1 4 2355100 2355100 0 10132 481 10593 25074;25075;25076;25077 20134;20135;20136 20135 3 355510 0 NICFTVWDVGGQDR TIPTIGFNVETVEYKNICFTVWDVGGQDRI KNICFTVWDVGGQDRIRPLWKHYFQNTQGL K N I D R I 0 1 1 2 1 1 0 2 0 1 0 0 0 1 0 0 1 1 0 2 0 0 14 0 1665.7569 P18085 P18085 60 73 ARF4 ADP-ribosylation factor 4 yes yes 2 4.769E-05 188.48 By MS/MS 9 0 1 1 118780 118780 0 10133 651 10594 25078 20137 20137 1 2337.6 0 NICQQVNIK LRKSHLAKEGLYQYKNICQQVNIKSLEDVV GLYQYKNICQQVNIKSLEDVVRAYLKMAEE K N I I K S 0 0 2 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1115.5757 Q14152 Q14152 76 84 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.291E-05 178.6 By MS/MS By matching 5.11 2.42 2 1 1 1 1 1 1 1 8 1 80227000 80171000 56470 10134 1422 10595 25079;25080;25081;25082;25083;25084;25085;25086;25087 20138;20139;20140;20141;20142;20143;20144;20145;20146 20139 8 2490000 79859 NIDEHANEDVER ITNGKSFENISKWLRNIDEHANEDVERMLL WLRNIDEHANEDVERMLLGNKCDMDDKRVV R N I E R M 1 1 2 2 0 0 3 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1439.6277 P61026 P61026 106 117 RAB10 Ras-related protein Rab-10 yes yes 2 3.3637E-05 171.49 By MS/MS 9 0 1 1 2116800 2116800 0 10135 1106 10596 25088 20147 20147 1 41659 0 NIDINDVTPNCR VKVHPEGKFVVDVDKNIDINDVTPNCRVAL VDKNIDINDVTPNCRVALRNDSYTLHKILP K N I C R V 0 1 3 2 1 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 12 0 1429.662 P62195 P62195 102 113 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0010373 128.88 By MS/MS 7 0 1 1 1029600 1029600 0 10136 1142 10597 25089 20148 20148 1 16163 0 NIDLVAQR ETQAQVDELKGIMVRNIDLVAQRGERLELL LKGIMVRNIDLVAQRGERLELLIDKTENLV R N I Q R G 1 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 927.51378 P51809 P51809 143 150 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.005383 123.72 By MS/MS 9 0 1 1 1186000 1186000 0 10137 1007 10598 25090 20149 20149 1 23340 0 NIDNFLSR ALVYDLDFPALRKNKNIDNFLSRYKDTINK PALRKNKNIDNFLSRYKDTINKIRDLRMKA K N I S R Y 0 1 2 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 8 0 977.49304 Q13464 Q13464 51 58 ROCK1 Rho-associated protein kinase 1 yes yes 2 0.025446 93.598 By MS/MS 3 0 1 1 177930 177930 0 10138 1389 10599 25091 20150 20150 1 3255.6 0 NIDQCSEIVK LGRSEYVEKFYRIKKNIDQCSEIVKCSVSS YRIKKNIDQCSEIVKCSVSSLGFNVH____ K N I V K C 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 1 0 0 0 1 0 0 10 0 1204.5758 Q92878 Q92878 1292 1301 RAD50 DNA repair protein RAD50 yes yes 2 0.00030244 140.17 By MS/MS 3 0 1 1 684020 684020 0 10139 2074 10600 25092 20151 20151 1 12516 0 NIEDVIAQGIGK DDDRLNKVISELNGKNIEDVIAQGIGKLAS NGKNIEDVIAQGIGKLASVPAGGAVAVSAA K N I G K L 1 0 1 1 0 1 1 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 12 0 1255.6772 P05387 P05387 50 61 RPLP2 60S acidic ribosomal protein P2 yes yes 2 2.2119E-12 227.94 By MS/MS 10 0 1 1 1841000 1841000 0 10140 490 10601 25093 20152 20152 1 99223 0 NIEEHASADVEK ITNEKSFDNIRNWIRNIEEHASADVEKMIL WIRNIEEHASADVEKMILGNKCDVNDKRQV R N I E K M 2 0 1 1 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 12 0 1340.6208 P61006 P61006 105 116 RAB8A Ras-related protein Rab-8A yes yes 2 1.6023E-18 248.98 By MS/MS 8.5 0.5 1 1 2 1264900 1264900 0 10141 1102 10602 25094;25095 20153 20153 1 22421 0 NIEEILTAR IADNLGWFSDLNGKRNIEEILTARGEQVHR DLNGKRNIEEILTARGEQVHRVAGEGALEL R N I A R G 1 1 1 0 0 0 2 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1057.5768 Q5SXM8 Q5SXM8 124 132 DNLZ DNL-type zinc finger protein yes yes 2 1.028E-05 179.1 By MS/MS 9.5 0.5 1 1 2 792180 792180 0 10142 1625 10603 25096;25097 20154;20155 20154 2 26776 0 NIEIDSPYEISR IDSLTVKIILPEGAKNIEIDSPYEISRAPD GAKNIEIDSPYEISRAPDELHYTYLDTFGR K N I S R A 0 1 1 1 0 0 2 0 0 3 0 0 0 0 1 2 0 0 1 0 0 0 12 0 1434.6991 P04843 P04843 380 391 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 6.3868E-13 242.45 By MS/MS By MS/MS 4.88 2.2 1 1 3 1 1 1 7 1 24650000 24531000 119740 10143 478 10604 25098;25099;25100;25101;25102;25103;25104;25105 20156;20157;20158;20159;20160;20161 20159 6 447140 100550 NIEKEIEKK YQAMVVRKVTPERLKNIEKEIEKKRMNVFN TPERLKNIEKEIEKKRMNVFNIRSVDDSLR K N I K K R 0 0 1 0 0 0 3 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 9 2 1129.6343 Q9H0K6 Q9H0K6 360 368 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 2 0.011503 127.46 By MS/MS 3 0 1 1 549650 549650 0 10144 2411 10605 25106 20162 20162 1 10057 0 NIEMTQEDVR DRGPVLEALVARAIRNIEMTQEDVRLIGLS ARAIRNIEMTQEDVRLIGLSATLPNYEDVA R N I V R L 0 1 1 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1233.566 O75643 O75643 638 647 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 5.0789E-08 197.79 By MS/MS 1.8 0.748 2 2 1 5 938980 938980 0 10145 340 10606;10607 25107;25108;25109;25110;25111 20163;20164;20165;20166 20166 142 4 256020 0 NIENSDKAIK EDQKKIKRRLETLLRNIENSDKAIKLLEHS ETLLRNIENSDKAIKLLEHSKGAGSKTLQQ R N I I K L 1 0 2 1 0 0 1 0 0 2 0 2 0 0 0 1 0 0 0 0 0 0 10 1 1130.5932 O95816 O95816 180 189 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.025121 114.89 By MS/MS 8 0 1 1 818650 818650 0 10146 428 10608 25112 20167 20167 1 10335 0 NIEYPVDLEISK RFVYEKTGGCQKLIKNIEYPVDLEISKELL LIKNIEYPVDLEISKELLSPGVKNKNFKCH K N I S K E 0 0 1 1 0 0 2 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 12 0 1418.7293 Q14694 Q14694 703 714 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 0.00094874 126.12 By MS/MS 4 0 1 1 687620 687620 0 10147 1453 10609 25113 20168 20168 1 64710 0 NIFAILQSVK TRTTILQSTGKNFSKNIFAILQSVKAREEG KNFSKNIFAILQSVKAREEGRAPEQRPAPN K N I V K A 1 0 1 0 0 1 0 0 0 2 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1131.6652 Q6P1J9 Q6P1J9 248 257 CDC73 Parafibromin yes yes 2 0.0011039 131.11 By MS/MS 6 0 1 1 66150 66150 0 10148 1698 10610 25114 20169 20169 1 454.73 0 NIFIECTGTDFTK PIINGDHSRITVNTRNIFIECTGTDFTKAK TRNIFIECTGTDFTKAKIVLDIIVTMFSEY R N I T K A 0 0 1 1 1 0 1 1 0 2 0 1 0 2 0 0 3 0 0 0 0 0 13 0 1544.7181 Q9NSD9 Q9NSD9 250 262 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 2.9522E-05 182.41 By MS/MS 5 0 1 1 1358300 1358300 0 10149 2569 10611 25115 20170 20170 1 13623 0 NIFLQYASTEVDGER VKVQTTKRGDPHELRNIFLQYASTEVDGER NIFLQYASTEVDGERYMTPEDFVQRYLGLY R N I E R Y 1 1 1 1 0 1 2 1 0 1 1 0 0 1 0 1 1 0 1 1 0 0 15 0 1740.8319 O75746 O75746 18 32 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 3.255E-07 214.61 By MS/MS 5 0 1 1 872340 872340 0 10150 344 10612 25116 20171 20171 1 8749.1 0 NIFPSNLVSAAFR APSKEVLDSFLDLARNIFPSNLVSAAFRSY ARNIFPSNLVSAAFRSYSTTYEERNITGTR R N I F R S 2 1 2 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 1 0 0 13 0 1434.7619 Q15758 Q15758 190 202 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.039596 75.566 By MS/MS 5 0 1 1 55534 55534 0 10151 1530 10613 25117 20172 20172 1 556.97 0 NIGISAHIDSGK CRWSSSGVIPNEKIRNIGISAHIDSGKTTL KIRNIGISAHIDSGKTTLTERVLYYTGRIA R N I G K T 1 0 1 1 0 0 0 2 1 3 0 1 0 0 0 2 0 0 0 0 0 0 12 0 1210.6306 Q96RP9 Q96RP9 48 59 GFM1 Elongation factor G, mitochondrial yes yes 2 0.041803 73.666 By MS/MS 5 0 1 1 1320200 1320200 0 10152 2223 10614 25118 20173 20173 1 13241 0 NIIHGSDSVESAEK KPGTIRGDFCIQVGRNIIHGSDSVESAEKE RNIIHGSDSVESAEKEIGLWFHPEELVDYT R N I E K E 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1484.7107 P15531 P15531 115 128 NME1 Nucleoside diphosphate kinase A yes yes 2;3 0.00045168 158.01 By MS/MS 9.5 0.5 2 2 4 2326000 2326000 0 10153 625 10615 25119;25120;25121;25122 20174;20175;20176;20177 20176 4 95807 0 NIIHGSDSVK KPGTIRGDFCIQVGRNIIHGSDSVKSAEKE IQVGRNIIHGSDSVKSAEKEISLWFKPEEL R N I V K S 0 0 1 1 0 0 0 1 1 2 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1068.5564 P22392;O60361 P22392 115 124 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 7.5662E-05 155.58 By MS/MS 9.5 0.5 1 1 2 5600500 5600500 0 10154 692 10616 25123;25124 20178;20179 20179 2 283040 0 NIIIALIDR FLRACAELHQNVNVKNIIIALIDRLALFAH QNVNVKNIIIALIDRLALFAHREDGPGIPA K N I D R L 1 1 1 1 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1039.639 Q96QK1 Q96QK1 297 305 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0022215 118.5 By MS/MS 5.5 0.5 1 1 2 899240 899240 0 10155 2217 10617 25125;25126 20180;20181 20180 2 8305.5 0 NILETLLQMK ADMEEYIWENSSSERNILETLLQMKAAEKN SSSERNILETLLQMKAAEKNMEINKEELLG R N I M K A 0 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 1 0 0 0 0 0 10 0 1201.674 P82673 P82673 261 270 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2 1.7289E-07 183.72 By MS/MS 7 0 1 1 807580 807580 0 10156 1232 10618 25127 20182 20182 743 1 12678 0 NILGGTVFR FKLKKMWKSPNGTIRNILGGTVFREPIICK PNGTIRNILGGTVFREPIICKNIPRLVPGW R N I F R E 0 1 1 0 0 0 0 2 0 1 1 0 0 1 0 0 1 0 0 1 0 0 9 0 975.55016 P48735;O75874 P48735 141 149 IDH2;IDH1 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] cytoplasmic yes no 2 0.012637 95.815 By MS/MS 7 0 1 1 496880 496880 0 10157 942 10619 25128 20183 20183 1 7800.2 0 NILIDFTK FEKMISGMYLGEIVRNILIDFTKRGLLFRG YLGEIVRNILIDFTKRGLLFRGRISERLKT R N I T K R 0 0 1 1 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 8 0 962.54368 P52789;P19367 P52789 756 763 HK2;HK1 Hexokinase-2;Hexokinase-1 no no 2 0.020956 98.582 By MS/MS 4 0 1 1 1274400 1274400 0 10158 1023;660 10620 25129 20184 20184 1 119930 0 NILLTNEQLESAR FIGRANHFFTVTDPRNILLTNEQLESARKI PRNILLTNEQLESARKIVHDYRQGIVPPGL R N I A R K 1 1 2 0 0 1 2 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1499.7944 Q9H9B4 Q9H9B4 36 48 SFXN1 Sideroflexin-1 yes yes 2 7.5797E-34 312.95 By MS/MS By MS/MS 6.5 3.04 1 1 2 2 1 1 6 2 86369000 86197000 172700 10159 2485 10621 25130;25131;25132;25133;25134;25135;25136;25137 20185;20186;20187;20188;20189;20190;20191;20192 20189 8 1245000 248190 NILLTNEQLESARK FIGRANHFFTVTDPRNILLTNEQLESARKI RNILLTNEQLESARKIVHDYRQGIVPPGLT R N I R K I 1 1 2 0 0 1 2 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 1 1627.8893 Q9H9B4 Q9H9B4 36 49 SFXN1 Sideroflexin-1 yes yes 2 4.4009E-16 256.95 By MS/MS 8 0 1 1 7845300 7845300 0 10160 2485 10622 25138 20193 20193 1 99046 0 NILMYGPPGTGK AIATRNTKKNRSLYRNILMYGPPGTGKTLF LYRNILMYGPPGTGKTLFAKKLALHSGMDY R N I G K T 0 0 1 0 0 0 0 3 0 1 1 1 1 0 2 0 1 0 1 0 0 0 12 0 1246.638 Q9NVI7 Q9NVI7 395 406 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 5.0718E-05 166.69 By MS/MS 5 0 2 2 5197000 5197000 0 10161 2598 10623;10624 25139;25140 20194;20195 20194 1120 2 52123 0 NILSVVGTDALKK TLFGEGPAERRERLRNILSVVGTDALKKTK LRNILSVVGTDALKKTKKDDEKSKKSKEEY R N I K K T 1 0 1 1 0 0 0 1 0 1 2 2 0 0 0 1 1 0 0 2 0 0 13 1 1356.7977 O43172 O43172 135 147 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 2 0.020684 102.95 By MS/MS 6 0 1 1 0 0 0 10162 194 10625 25141 20196 20196 1 0 0 NINIGDISIK AVSAVKNMNLPEIPRNINIGDISIKVPNLP PEIPRNINIGDISIKVPNLPSFK_______ R N I I K V 0 0 2 1 0 0 0 1 0 4 0 1 0 0 0 1 0 0 0 0 0 0 10 0 1085.6081 Q92572 Q92572 176 185 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 0.026081 90.15 By MS/MS 9 0 1 1 457130 457130 0 10163 2056 10626 25142 20197 20197 0 8996.5 0 NIPGITLLNVSK CIIYNEDNGIIKAFRNIPGITLLNVSKLNI AFRNIPGITLLNVSKLNILKLAPGGHVGRF R N I S K L 0 0 2 0 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1267.75 P36578 P36578 223 234 RPL4 60S ribosomal protein L4 yes yes 2 0.0028917 109.72 By MS/MS 7 0.816 1 1 1 3 8021400 8021400 0 10164 838 10627 25143;25144;25145 20198;20199 20198 2 67264 0 NIQACKELAQTTR EGAKHFSGLEEAVYRNIQACKELAQTTRTA YRNIQACKELAQTTRTAYGPNGMNKMVINH R N I T R T 2 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 2 0 0 0 0 0 13 1 1531.7777 P50990 P50990 32 44 CCT8 T-complex protein 1 subunit theta yes yes 2 4.4173E-07 222.2 By MS/MS 6.5 0.5 1 1 2 4521400 4521400 0 10165 984 10628 25146;25147 20200;20201 20200 2 35941 0 NIQHINR GVQKFDLGIICVDNKNIQHINRIYRDRNVP GIICVDNKNIQHINRIYRDRNVPTDVLSFP K N I N R I 0 1 2 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 7 0 893.48315 P58557 P58557 46 52 YBEY Putative ribonuclease yes yes 2 0.016696 118.01 By MS/MS 9.5 0.5 1 1 2 484510 484510 0 10166 1086 10629 25148;25149 20202 20202 1 14020 0 NIQVSHQEFSK TKVQESLKKQEGLLKNIQVSHQEFSKMKQS GLLKNIQVSHQEFSKMKQSNNEANLREEVL K N I S K M 0 0 1 0 0 2 1 0 1 1 0 1 0 1 0 2 0 0 0 1 0 0 11 0 1315.6521 Q8WUM4 Q8WUM4 628 638 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.0030168 109.16 By MS/MS 4 0 1 1 661230 661230 0 10167 2018 10630 25150 20203 20203 1 62226 0 NIRDDEGFIIR FRLTIPRKSKLAVHRNIRDDEGFIIRHFAG AVHRNIRDDEGFIIRHFAGAVCYETTQFVE R N I I R H 0 2 1 2 0 0 1 1 0 3 0 0 0 1 0 0 0 0 0 0 0 0 11 1 1346.6943 Q9UM54 Q9UM54 570 580 MYO6 Unconventional myosin-VI yes yes 2 4.1332E-05 169.93 By MS/MS 3 0 1 1 0 0 0 10168 2781 10631 25151 20204 20204 1 0 0 NIRDNEEKDSAFR PMLQQFIRPWCTSLRNIRDNEEKDSAFRGI LRNIRDNEEKDSAFRGICTMISVNPSGVIQ R N I F R G 1 2 2 2 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 13 2 1592.7543 Q92973;O14787 Q92973 811 823 TNPO1;TNPO2 Transportin-1;Transportin-2 yes no 3 0.0077932 119.25 By MS/MS 4 0 1 1 2553500 2553500 0 10169 2082 10632 25152 20205 20205 1 240300 0 NIREFEEEKVK EDEVFEEFCREIGVRNIREFEEEKVKRQNE IGVRNIREFEEEKVKRQNEIAKKRLEFENQ R N I V K R 0 1 1 0 0 0 4 0 0 1 0 2 0 1 0 0 0 0 0 1 0 0 11 2 1419.7358 Q14683 Q14683 788 798 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.0031588 107.34 By MS/MS 3 0 1 1 372180 372180 0 10170 1451 10633 25153 20206 20206 1 6809.8 0 NISELFYYAQK PEIETCVECSAKNLRNISELFYYAQKAVLH KNLRNISELFYYAQKAVLHPTAPLYDPEAK R N I Q K A 1 0 1 0 0 1 1 0 0 1 1 1 0 1 0 1 0 0 2 0 0 0 11 0 1374.682 Q8IXI1;Q8IXI2 Q8IXI1 154 164 RHOT2;RHOT1 Mitochondrial Rho GTPase 2;Mitochondrial Rho GTPase 1 yes no 2 2.6763E-05 172.88 By MS/MS 5 0 1 1 727130 727130 0 10171 1876 10634 25154 20207 20207 1 7292.8 0 NISFTVWDVGGQDK TIPTIGFNVETVEYKNISFTVWDVGGQDKI KNISFTVWDVGGQDKIRPLWRHYFQNTQGL K N I D K I 0 0 1 2 0 1 0 2 0 1 0 1 0 1 0 1 1 1 0 2 0 0 14 0 1564.7522 P84077;P61204 P84077 60 73 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 0.00023831 171.99 By MS/MS 9 0 1 1 144870 144870 0 10172 1116 10635 25155 20208 20208 1 2851.1 0 NITLDDASAPR AVAAPRPDRLVNRLKNITLDDASAPRLMVL NRLKNITLDDASAPRLMVLRQPRGPDNSMG K N I P R L 2 1 1 2 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1171.5833 O75534 O75534 759 769 CSDE1 Cold shock domain-containing protein E1 yes yes 2 4.365E-06 178.46 By MS/MS 7 2 1 1 1 1 1 1 1 7 10642000 10642000 0 10173 333 10636 25156;25157;25158;25159;25160;25161;25162 20209;20210 20209 2 751660 0 NITYEELR VQGPDPNLEESPKRKNITYEELRNKNRESY EESPKRKNITYEELRNKNRESYEVSLTQKT K N I L R N 0 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 1036.5189 Q9NX40 Q9NX40 196 203 OCIAD1 OCIA domain-containing protein 1 yes yes 2 0.0054619 123.35 By MS/MS 7 0 1 1 2653500 2653500 0 10174 2618 10637 25163 20211 20211 1 41656 0 NITYLPAGQSVLLQLPQ LEAAEDIAYQLSRSRNITYLPAGQSVLLQL TYLPAGQSVLLQLPQ_______________ R N I P Q - 1 0 1 0 0 3 0 1 0 1 4 0 0 0 2 1 1 0 1 1 0 0 17 0 1854.0251 P35232 P35232 256 272 PHB Prohibitin yes yes 2 1.1238E-11 245.55 By MS/MS 8 0 1 1 599480 599480 0 10175 814 10638 25164 20212 20212 1 7568.3 0 NIVEAAAVR RCVPKDKAIKKFVIRNIVEAAAVRDISEAS KKFVIRNIVEAAAVRDISEASVFDAYVLPK R N I V R D 3 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 941.52943 P62854;Q5JNZ5 P62854 43 51 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.00049743 146.79 By MS/MS By matching 9.2 0.748 1 2 2 2 3 48845000 48558000 287810 10176 1177 10639 25165;25166;25167;25168;25169 20213;20214 20214 2 2461800 405180 NIVSDCSAFVK SGTTGNPKGAMVTHRNIVSDCSAFVKATEN VTHRNIVSDCSAFVKATENTVNPCPDDTLI R N I V K A 1 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 0 0 0 2 0 0 11 0 1238.5965 P33121 P33121 292 302 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.00020264 157.75 By MS/MS 5 0 1 1 1398500 1398500 0 10177 799 10640 25170 20215 20215 1 14026 0 NIYVLQELDNPGAK VFYGTEKDKNSVNFKNIYVLQELDNPGAKR KNIYVLQELDNPGAKRILELDQFKGQQGQK K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 P12956 P12956 101 114 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 9.3974E-24 303.36 By MS/MS 7 1.63 1 1 1 3 6314000 6314000 0 10178 596 10641 25171;25172;25173 20216;20217;20218 20216 2 65387 0 NIYYLCAPNR TSLSEYASRMRAGTRNIYYLCAPNRHLAEH RAGTRNIYYLCAPNRHLAEHSPYYEAMKKK R N I N R H 1 1 2 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 10 0 1282.6128 Q12931 Q12931 496 505 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 3.3156E-06 178.83 By MS/MS 5 0 1 1 6706000 6706000 0 10179 1340 10642 25174 20219 20219 1 67258 0 NKDDELTGF GQNEDLVLTGYQVDKNKDDELTGF______ GYQVDKNKDDELTGF_______________ K N K G F - 0 0 1 2 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 9 1 1037.4666 P01040 P01040 90 98 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 0.00012028 176.44 By MS/MS By MS/MS 6.22 3.46 1 1 1 1 1 2 2 2 7 3095400 1091500 2003900 10180 449 10643 25175;25176;25177;25178;25179;25180;25181;25182;25183 20220;20221;20222 20222 2 54339 2105500 NKDQGTYEDYVEGLR LDFEHFLPMLQTVAKNKDQGTYEDYVEGLR NKDQGTYEDYVEGLRVFDKEGNGTVMGAEI K N K L R V 0 1 1 2 0 1 2 2 0 0 1 1 0 0 0 0 1 0 2 1 0 0 15 1 1785.817 P60660 P60660 80 94 MYL6 Myosin light polypeptide 6 yes yes 2;3 1.0747E-06 234.04 By MS/MS 10 0 2 2 1058300 1058300 0 10181 1094 10644 25184;25185 20223;20224 20224 2 57039 0 NKEEAAEYAK HKRRRIALKKQRTKKNKEEAAEYAKLLAKR QRTKKNKEEAAEYAKLLAKRMKEAKEKRQE K N K A K L 3 0 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 10 1 1151.5459 P62753 P62753 202 211 RPS6 40S ribosomal protein S6 yes yes 2 0.00013474 163.16 By MS/MS 7.5 0.5 1 1 2 32931000 32931000 0 10182 1169 10645 25186;25187 20225 20225 1 417180 0 NKEGLHNAK TRGKFNTSDVSAIEKNKEGLHNAKEILTRL VSAIEKNKEGLHNAKEILTRLGVEPSDDDC K N K A K E 1 0 2 0 0 0 1 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1009.5305 P19367 P19367 345 353 HK1 Hexokinase-1 yes yes 2 0.0033051 141.52 By MS/MS 4 0 1 1 149720 149720 0 10183 660 10646 25188 20226 20226 1 14090 0 NKEPPAPAQQLQPQPVAVQGPEPAR PAAVRAGPDEDLSHRNKEPPAPAQQLQPQP LQPQPVAVQGPEPARVEKIFTPAAPVHTNK R N K A R V 4 1 1 0 0 5 2 1 0 0 1 1 0 0 7 0 0 0 0 2 0 0 25 1 2646.3878 Q9HC07 Q9HC07 43 67 TMEM165 Transmembrane protein 165 yes yes 3 3.0297E-05 100.44 By MS/MS 3 1.41 1 1 1 1 1 5 2426100 2426100 0 10184 2508 10647 25189;25190;25191;25192;25193 20227 20227 1 543020 0 NKEPPAPAQQLQPQPVAVQGPEPARVEK PAAVRAGPDEDLSHRNKEPPAPAQQLQPQP QPVAVQGPEPARVEKIFTPAAPVHTNKEDP R N K E K I 4 1 1 0 0 5 3 1 0 0 1 2 0 0 7 0 0 0 0 3 0 0 28 2 3002.5938 Q9HC07 Q9HC07 43 70 TMEM165 Transmembrane protein 165 yes yes 4 0.00014051 81.553 By MS/MS 1.5 0.5 1 1 2 745460 745460 0 10185 2508 10648 25194;25195 20228;20229 20228 2 218550 0 NKESKDPADETEAD ERLREKDKHIEEVRKNKESKDPADETEAD_ KNKESKDPADETEAD_______________ K N K A D - 2 0 1 3 0 0 3 0 0 0 0 2 0 0 1 1 1 0 0 0 0 0 14 2 1547.6587 P16949 P16949 136 149 STMN1 Stathmin yes yes 2 0.0010151 177.57 By MS/MS 9 0 1 1 258930 258930 0 10186 636 10649 25196 20230 20230 1 5095.7 0 NKESVNKAQEEVTK SYESQIEVMAAEVAKNKESVNKAQEEVTKQ KNKESVNKAQEEVTKQKEVITAQDTVIKAK K N K T K Q 1 0 2 0 0 1 3 0 0 0 0 3 0 0 0 1 1 0 0 2 0 0 14 2 1602.8213 O95347 O95347 864 877 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.026608 124.42 By MS/MS 3 0 1 1 777930 777930 0 10187 405 10650 25197 20231 20231 1 14234 0 NKGNECFQK ERLAYINPDLALEEKNKGNECFQKGDYPQA LALEEKNKGNECFQKGDYPQAMKHYTEAIK K N K Q K G 0 0 2 0 1 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 9 1 1123.508 P31948 P31948 365 373 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.023331 109.71 By MS/MS 5.5 0.5 1 1 2 1485700 1485700 0 10188 795 10651 25198;25199 20232 20232 1 13439 0 NKGSAALGGALALAER AVSLPTSSVPETRGRNKGSAALGGALALAE KGSAALGGALALAERSSREGSSQRMPRQPS R N K E R S 5 1 1 0 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 16 1 1497.8263 Q6NZ67 Q6NZ67 109 124 MZT2B Mitotic-spindle organizing protein 2B yes yes 2;3 0.00038475 128.45 By MS/MS 9 0 2 2 994170 994170 0 10189 1694 10652 25200;25201 20233;20234 20233 2 19565 0 NKIAGYVTHLMK RVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ KLRNKIAGYVTHLMKRIQRGPVRGISIKLQ R N K M K R 1 0 1 0 0 0 0 1 1 1 1 2 1 0 0 0 1 0 1 1 0 0 12 1 1373.7489 P08708 P08708 48 59 RPS17 40S ribosomal protein S17 yes yes 3 0.0022057 118.61 By MS/MS 9.5 0.5 1 1 2 544830 544830 0 10190 527 10653 25202;25203 20235 20235 229 0 16705 0 NKITITNDQNR GILRVTAEDKGTGNKNKITITNDQNRLTPE TGNKNKITITNDQNRLTPEEIERMVNDAEK K N K N R L 0 1 3 1 0 1 0 0 0 2 0 1 0 0 0 0 2 0 0 0 0 0 11 1 1315.6844 P11021 P11021 522 532 HSPA5 78 kDa glucose-regulated protein yes yes 3 1.1459E-05 165.63 By MS/MS 5 0 1 1 1053200 1053200 0 10191 571 10654 25204 20236 20236 1 10563 0 NKKDELQSER KARVEELDRKYYEVKNKKDELQSERNYLWR YYEVKNKKDELQSERNYLWREENAEQQALA K N K E R N 0 1 1 1 0 1 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 10 2 1245.6313 Q9UQE7 Q9UQE7 460 469 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0015039 143.5 By MS/MS 3 0 1 1 279120 279120 0 10192 2807 10655 25205 20237 20237 1 5107.1 0 NKLAELEEALQK ADAEQRGELALKDARNKLAELEEALQKAKQ DARNKLAELEEALQKAKQDMARLLREYQEL R N K Q K A 2 0 1 0 0 1 3 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 12 1 1384.7562 CON__P13647;P13647 CON__P13647 430 441 KRT5 Keratin, type II cytoskeletal 5 yes no 2;3 3.6723E-08 217.02 By MS/MS By MS/MS 4.17 1.07 2 2 1 1 4 2 7641800 7068000 573800 + 10193 52 10656 25206;25207;25208;25209;25210;25211 20238;20239;20240;20241 20238 4 325880 73037 NKLAHSWVLQNMENWVER NPSQCLDWLAVQTPRNKLAHSWVLQNMENW AHSWVLQNMENWVERFLLAHNYPRVRTSAA R N K E R F 1 1 3 0 0 1 2 0 1 0 2 1 1 0 0 1 0 2 0 2 0 0 18 1 2253.1113 Q70CQ2 Q70CQ2 2653 2670 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 3 0.04484 65.477 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 163950 0 163950 10194 1749 10657 25212;25213 20242;20243 20242 922 1 0 231850 NKLDHYAIIK LRRQPKYPRKSAPRRNKLDHYAIIKFPLTT SAPRRNKLDHYAIIKFPLTTESAMKKIEDN R N K I K F 1 0 1 1 0 0 0 0 1 2 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1213.6819 P62750 P62750 69 78 RPL23A 60S ribosomal protein L23a yes yes 3 0.041598 95.775 By MS/MS 9 0 1 1 467940 467940 0 10195 1168 10658 25214 20244 20244 0 9209.1 0 NKLNDLEDALQQAK SDAEQRGENALKDAKNKLNDLEDALQQAKE KNKLNDLEDALQQAKEDLARLLRDYQELMN K N K A K E 2 0 2 2 0 2 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 1598.8264 CON__P04264;P04264 P04264 442 455 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 2.1747E-50 317.44 By MS/MS By MS/MS 4.56 1.07 2 2 3 2 6 3 8426700 7869200 557540 + 10196 471;45 10659 25215;25216;25217;25218;25219;25220;25221;25222;25223 20245;20246;20247;20248;20249;20250;20251;20252 20245 8 274360 275950 NKLNDLEEALQQAK ADAEQRGEHALKDARNKLNDLEEALQQAKE RNKLNDLEEALQQAKEDLARLLRDYQELMN R N K A K E 2 0 2 1 0 2 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 1612.842 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 440 453 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 1.3959E-08 199.4 By MS/MS By MS/MS 4.6 1.36 2 1 2 1 4 1720200 1235800 484400 + 10197 55 10660 25224;25225;25226;25227;25228 20253;20254;20255;20256;20257;20258 20256 5 8495.1 196880 NKLNQEQNAK AVAELDRLYKELQLRNKLNQEQNAKLQQQR ELQLRNKLNQEQNAKLQQQRECLNKRNSEV R N K A K L 1 0 3 0 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1185.6102 Q13625 Q13625 274 283 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 0.00031846 156.35 By MS/MS 3 0 1 1 377850 377850 0 10198 1406 10661 25229 20259 20259 1 6913.6 0 NKLQQLPADFGR DFCGLTHLVKLDLSKNKLQQLPADFGRLVN LSKNKLQQLPADFGRLVNLQHLDLLNNKLV K N K G R L 1 1 1 1 0 2 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 12 1 1385.7415 Q96AG4 Q96AG4 72 83 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.00011779 175.65 By MS/MS 7.5 0.5 1 1 2 6173200 6173200 0 10199 2107 10662 25230;25231 20260 20260 1 93316 0 NKNPAPPIDAVEQILPTLVR GYLRNLTWTLSNLCRNKNPAPPIDAVEQIL PPIDAVEQILPTLVRLLHHDDPEVLADTCW R N K V R L 2 1 2 1 0 1 1 0 0 2 2 1 0 0 4 0 1 0 0 2 0 0 20 1 2184.2267 P52292 P52292 239 258 KPNA2 Importin subunit alpha-1 yes yes 3 0.0044088 84.581 By MS/MS 6 0 1 1 1404300 1404300 0 10200 1013 10663 25232 20261;20262 20262 2 9653.2 0 NKPGPNIESGNEDDDASFK DEFLQSRKGQKKNQKNKPGPNIESGNEDDD PNIESGNEDDDASFKIKTVAQKKAEKKERE K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 O60841 O60841 206 224 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 0.014901 70.335 By MS/MS 2.5 0.5 1 1 2 755030 755030 0 10201 283 10664 25233;25234 20263 20263 1 113770 0 NKPGVYTK QLQGIVSWGYGCAQKNKPGVYTKVCNYVNW GYGCAQKNKPGVYTKVCNYVNWIQQTIAAN K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 CON__P00761;Q9BYE2;CON__P07477;P07477 CON__P00761 209 216 TMPRSS13;PRSS1 Transmembrane protease serine 13;Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 no no 3 0.043791 76.679 By matching By MS/MS 4.43 2.87 1 2 1 1 1 1 4 3 1183100 632240 550850 + 10202 37;46 10665 25235;25236;25237;25238;25239;25240;25241 20264;20265 20265 2 73477 670270 NKPILHTDLDVK LKNLGHWLGMITLAKNKPILHTDLDVKSLL LAKNKPILHTDLDVKSLLLEAYVKGQQELL K N K V K S 0 0 1 2 0 0 0 0 1 1 2 2 0 0 1 0 1 0 0 1 0 0 12 1 1391.7773 A5YKK6 A5YKK6 1207 1218 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.022334 77.124 By MS/MS 2.5 0.5 1 1 2 1213300 1213300 0 10203 19 10666 25242;25243 20266 20266 1 302120 0 NKQKPITPETAEK IDLRDDPSTIEKLAKNKQKPITPETAEKLA AKNKQKPITPETAEKLARDLKAVKYVECSA K N K E K L 1 0 1 0 0 1 2 0 0 1 0 3 0 0 2 0 2 0 0 0 0 0 13 2 1482.8042 P60953 P60953 132 144 CDC42 Cell division control protein 42 homolog yes yes 3 0.014394 87.216 By MS/MS 9 0 1 1 206330 206330 0 10204 1100 10667 25244 20267 20267 0 4060.6 0 NKQTYSTEPNNLK QWMVVRNCSSFLIKRNKQTYSTEPNNLKAR KRNKQTYSTEPNNLKARNSFRYNGLIHRKT R N K L K A 0 0 3 0 0 1 1 0 0 0 1 2 0 0 1 1 2 0 1 0 0 0 13 1 1535.758 P46779 P46779 21 33 RPL28 60S ribosomal protein L28 yes yes 2 8.3085E-17 266.26 By MS/MS 9 0 1 1 767180 767180 0 10205 917 10668 25245 20268 20268 1 15098 0 NKSELLPTVR KIPKKNILLTIGSYKNKSELLPTVRLLESL IGSYKNKSELLPTVRLLESLGYSLYASLGT K N K V R L 0 1 1 0 0 0 1 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 10 1 1155.6612 P27708 P27708 1324 1333 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.005796 120.27 By MS/MS 2.5 1.12 1 1 1 1 4 2061400 2061400 0 10206 745 10669 25246;25247;25248;25249 20269 20269 1 339450 0 NKSTESLQANVQR KVARTIGISVDPRRRNKSTESLQANVQRLK RRNKSTESLQANVQRLKEYRSKLILFPRKP R N K Q R L 1 1 2 0 0 2 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 13 1 1473.7536 P26373 P26373 104 116 RPL13 60S ribosomal protein L13 yes yes 2;3 8.0591E-08 223.77 By MS/MS 8 0 2 2 2379100 2379100 0 10207 731 10670 25250;25251 20270;20271 20271 2 30035 0 NKTEYEEAQDAIVK FTNSKLTSLNEEYTKNKTEYEEAQDAIVKE KNKTEYEEAQDAIVKEIVNISSGYVEPMQT K N K V K E 2 0 1 1 0 1 3 0 0 1 0 2 0 0 0 0 1 0 1 1 0 0 14 1 1636.7944 P43246 P43246 566 579 MSH2 DNA mismatch repair protein Msh2 yes yes 2 2.3244E-16 265.75 By MS/MS 4 0 1 1 1258300 1258300 0 10208 894 10671 25252 20272 20272 1 118420 0 NKTGAAPIIDVVR LWTLVSEQTRVNAAKNKTGAAPIIDVVRSG AKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ K N K V R S 2 1 1 1 0 0 0 1 0 2 0 1 0 0 1 0 1 0 0 2 0 0 13 1 1352.7776 P46776 P46776 93 105 RPL27A 60S ribosomal protein L27a yes yes 2 0.0013703 154.67 By MS/MS 9.5 0.5 1 1 2 4021800 4021800 0 10209 914 10672 25253;25254 20273;20274 20273 2 102980 0 NKTGEITASSNK EFGFQNNGFSVYINRNKTGEITASSNKSLN INRNKTGEITASSNKSLNLLKIKHGDLLFL R N K N K S 1 0 2 0 0 0 1 1 0 1 0 2 0 0 0 2 2 0 0 0 0 0 12 1 1248.631 Q8TAT6 Q8TAT6 51 62 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 0.0010184 150.09 By MS/MS 4.5 0.5 1 1 2 638720 638720 0 10210 1977 10673 25255;25256 20275 20275 1 24965 0 NKYDKTPEDVICER VNVLSSHHLIVKNSRNKYDKTPEDVICERS RNKYDKTPEDVICERSKNKSVELKERIREY R N K E R S 0 1 1 2 1 0 2 0 0 1 0 2 0 0 1 0 1 0 1 1 0 0 14 2 1765.8305 Q86XL3 Q86XL3 443 456 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.00098943 122.33 By MS/MS 4.5 0.5 1 1 2 3109300 3109300 0 10211 1845 10674 25257;25258 20276 20276 1 242220 0 NKYEDEINK DSELKNMQDMVEDYRNKYEDEINKRTNAEN MVEDYRNKYEDEINKRTNAENEFVTIKKDV R N K N K R 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 1 1151.5459 CON__P04264;CON__H-INV:HIT000016045;P04264;CON__P13647;P13647;CON__P05787;P05787;CON__Q9H552;CON__H-INV:HIT000292931;CON__Q922U2;CON__P02538;P02538;CON__Q8VED5;CON__P04259;CON__P48668;P48668;CON__Q5XKE5;Q5XKE5 P04264 268 276 KRT1;KRT5;KRT8;KRT6A;KRT6C;KRT79 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 79 no no 2;3 4.0592E-05 190.73 By MS/MS By MS/MS 3.38 0.696 1 3 4 3 5 5592200 1794900 3797300 + 10212 471;45;52;44;56;40;74;68 10675 25259;25260;25261;25262;25263;25264;25265;25266 20277;20278;20279;20280;20281;20282 20278 6 140240 1919900 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 1307.647 CON__P04264;CON__H-INV:HIT000016045;P04264;CON__P13647;P13647;CON__P05787;P05787;CON__Q922U2;CON__P02538;P02538;CON__Q8VED5;CON__P04259;CON__P48668;P48668 P04264 268 277 KRT1;KRT5;KRT8;KRT6A;KRT6C Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2;3 1.7176E-09 205.12 By MS/MS By MS/MS 5.38 2.92 4 4 4 4 3 4 3 4 3 4 18 19 400530000 220910000 179620000 + 10213 471;45;52;44;56;40;74 10676 25267;25268;25269;25270;25271;25272;25273;25274;25275;25276;25277;25278;25279;25280;25281;25282;25283;25284;25285;25286;25287;25288;25289;25290;25291;25292;25293;25294;25295;25296;25297;25298;25299;25300;25301;25302;25303 20283;20284;20285;20286;20287;20288;20289;20290;20291;20292;20293;20294;20295;20296;20297;20298;20299;20300;20301;20302;20303;20304;20305;20306;20307;20308;20309;20310;20311;20312;20313;20314;20315;20316;20317;20318 20309 36 16007000 75966000 NKYETEINITK AKVRNHYNEEMSNLRNKYETEINITKTTIK SNLRNKYETEINITKTTIKEISMQKEDDSK R N K T K T 0 0 2 0 0 0 2 0 0 2 0 2 0 0 0 0 2 0 1 0 0 0 11 1 1351.6983 P15924 P15924 1208 1218 DSP Desmoplakin yes yes 2 3.827E-21 251.64 By MS/MS By MS/MS 3 0.707 1 2 1 3 1 2283600 1142700 1140900 10214 628 10677 25304;25305;25306;25307 20319;20320 20319 2 198900 145220 NLADCLQK GELILTSESSRYQFRNLADCLQKIRDMITE SSRYQFRNLADCLQKIRDMITEASQTPKEP R N L Q K I 1 0 1 1 1 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 960.46987 Q14197 Q14197 146 153 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.016064 99.442 By MS/MS 9 0 1 1 3362600 3362600 0 10215 1431 10678 25308 20321 20321 1 66177 0 NLADLEVQMGAVK LYALTITNYLNWVVRNLADLEVQMGAVKKV VRNLADLEVQMGAVKKVNSFLTMESENYEG R N L V K K 2 0 1 1 0 1 1 1 0 0 2 1 1 0 0 0 0 0 0 2 0 0 13 0 1386.7177 O60706 O60706 1268 1280 ABCC9 ATP-binding cassette sub-family C member 9 yes yes 2 0.022459 83.081 By MS/MS 1 0 1 1 310030 310030 0 10216 271 10679 25309 20322 20322 117 1 74707 0 NLAEALLTYETLDAK ERAKHILKTHAKEHKNLAEALLTYETLDAK NLAEALLTYETLDAKEIQIVLEGKKLEVR_ K N L A K E 3 0 1 1 0 0 2 0 0 0 4 1 0 0 0 0 2 0 1 0 0 0 15 0 1663.8669 Q96TA2 Q96TA2 745 759 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 1.9024E-16 308.58 By MS/MS 6 0 2 2 1655400 1655400 0 10217 2241 10680 25310;25311 20323;20324;20325 20323 3 11380 0 NLAIFDLR WLPRDQKLLLAGMHRNLAIFDLRNTSQKMF LLAGMHRNLAIFDLRNTSQKMFVNTKAVQG R N L L R N 1 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 960.53927 Q9NXC5 Q9NXC5 207 214 MIOS WD repeat-containing protein mio yes yes 2 0.016312 103.74 By MS/MS 4.5 0.5 1 1 2 565770 565770 0 10218 2623 10681 25312;25313 20326;20327 20326 2 44915 0 NLAMEATYINHNFSQQCLR NEPPQDEGNSFNSPRNLAMEATYINHNFSQ EATYINHNFSQQCLRMGKERYNFPNPNPFV R N L L R M 2 1 3 0 1 2 1 0 1 1 2 0 1 1 0 1 1 0 1 0 0 0 19 0 2309.0681 O15371 O15371 311 329 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.0096943 80.738 By MS/MS 6 0.816 1 1 1 3 4126800 4126800 0 10219 185 10682 25314;25315;25316 20328 20328 95 1 36358 0 NLANTVTEEILEK PDPEVMAKVKVLFVRNLANTVTEEILEKAF VRNLANTVTEEILEKAFSQFGKLERVKKLK R N L E K A 1 0 2 0 0 0 3 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 13 0 1472.7722 O60506 O60506 344 356 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 2 3.9732E-24 274.53 By MS/MS 6.5 1.12 1 1 1 1 4 2835100 2835100 0 10220 261 10683 25317;25318;25319;25320 20329;20330;20331 20329 3 27064 0 NLATTVTEEILEK PDPEVMAKVKVLFVRNLATTVTEEILEKSF VRNLATTVTEEILEKSFSEFGKLERVKKLK R N L E K S 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 3 0 0 1 0 0 13 0 1459.777 O43390 O43390 347 359 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 2 0.00029948 152.38 By MS/MS 5 0 1 1 372310 372310 0 10221 205 10684 25321 20332 20332 1 3734.1 0 NLDALENAQAIK AHNRAVLAQLGCPIKNLDALENAQAIKKKL PIKNLDALENAQAIKKKLGKLGRQVLPPSE K N L I K K 3 0 2 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 12 0 1298.683 Q86UT6 Q86UT6 648 659 NLRX1 NLR family member X1 yes yes 2 3.0233E-05 173.64 By MS/MS 4 0 1 1 1308200 1308200 0 10222 1825 10685 25322 20333 20333 1 123110 0 NLDDGIDDERLR QDRITRYQGVNLYVKNLDDGIDDERLRKEF YVKNLDDGIDDERLRKEFSPFGTITSAKVM K N L L R K 0 2 1 4 0 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 12 1 1429.6797 P11940;Q9H361 P11940 300 311 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2;3 7.4966E-08 201.09 By MS/MS 5 0 3 3 23237000 23237000 0 10223 586 10686 25323;25324;25325 20334;20335;20336 20336 3 233050 0 NLDDTIDDEKLR QERISRYQGVNLYIKNLDDTIDDEKLRKEF YIKNLDDTIDDEKLRKEFSPFGSITSAKVM K N L L R K 0 1 1 4 0 0 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 12 1 1445.6998 Q13310;P0CB38 Q13310 300 311 PABPC4;PABPC4L Polyadenylate-binding protein 4;Polyadenylate-binding protein 4-like yes no 3 0.020637 78.548 By MS/MS 5 0 1 1 1457000 1457000 0 10224 1369 10687 25326 20337 20337 1 14613 0 NLDENGLDLLSK TFPKWKPGSLASHVKNLDENGLDLLSKMLI HVKNLDENGLDLLSKMLIYDPAKRISGKMA K N L S K M 0 0 2 2 0 0 1 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1329.6776 P06493 P06493 255 266 CDK1 Cyclin-dependent kinase 1 yes yes 2 1.2902E-08 212.09 By MS/MS 9 0.816 1 1 1 3 7713400 7713400 0 10225 496 10688 25327;25328;25329 20338 20338 1 107750 0 NLDEQLSAPK ELKPGNLLKDKDRLKNLDEQLSAPKKDVKQ KDRLKNLDEQLSAPKKDVKQPEELPPITTT K N L P K K 1 0 1 1 0 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1113.5666 A5YKK6 A5YKK6 1311 1320 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00067304 142 By MS/MS 3 0 1 1 0 0 0 10226 19 10689 25330 20339 20339 1 0 0 NLDIERPTYTNLNR AFMVDNEAIYDICRRNLDIERPTYTNLNRL RNLDIERPTYTNLNRLISQIVSSITASLRF R N L N R L 0 2 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 14 1 1717.8747 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 216 229 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2;3 0.00030658 156 By MS/MS By MS/MS 5.89 2.18 1 1 2 2 6 2 2 1 1 16 2 1033100000 1032700000 342770 10227 1210;1751;2290;1211 10690 25331;25332;25333;25334;25335;25336;25337;25338;25339;25340;25341;25342;25343;25344;25345;25346;25347;25348 20340;20341;20342;20343;20344;20345;20346;20347;20348;20349;20350;20351;20352;20353;20354;20355;20356 20350 16 8385300 351240 NLDISRPDKK LSGIGVSQVLSTYMKNLDISRPDKKSKKQQ STYMKNLDISRPDKKSKKQQDSTYPIKNEV K N L K K S 0 1 1 2 0 0 0 0 0 1 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1184.6513 P46977 P46977 432 441 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.0026442 137.05 By MS/MS 2.5 1.12 1 1 1 1 4 809560 809560 0 10228 923 10691 25349;25350;25351;25352 20357;20358 20358 2 174740 0 NLDKSIDNK DPSLRKSGVGNIFIKNLDKSIDNKALYDTF GNIFIKNLDKSIDNKALYDTFSAFGNILSC K N L N K A 0 0 2 2 0 0 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1045.5404 P11940;Q13310;P0CB38 P11940 105 113 PABPC1;PABPC4;PABPC4L Polyadenylate-binding protein 1;Polyadenylate-binding protein 4;Polyadenylate-binding protein 4-like no no 2 4.5157E-06 181.41 By MS/MS By matching 5 0 2 1 1 2989700 2952800 36839 10229 586;1369 10692 25353;25354 20359 20359 1 29615 30937 NLDLDSIIAEVK SVTDTNVILSMDNSRNLDLDSIIAEVKAQY NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE R N L V K A 1 0 1 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1328.7187 CON__P13647;P13647;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P04259;CON__P48668;P48668;CON__Q5XKE5;Q5XKE5 CON__P35908v2 342 353 KRT5;KRT2;KRT6A;KRT75;KRT6C;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 79 no no 2 1.3747E-33 301.11 By MS/MS By MS/MS 5.21 2.52 2 1 4 3 3 5 1 2 1 2 13 11 63262000 47807000 15455000 + 10230 55;52;44;56;40;68 10693 25355;25356;25357;25358;25359;25360;25361;25362;25363;25364;25365;25366;25367;25368;25369;25370;25371;25372;25373;25374;25375;25376;25377;25378 20360;20361;20362;20363;20364;20365;20366;20367;20368;20369;20370;20371;20372;20373;20374;20375;20376;20377;20378;20379;20380;20381;20382;20383;20384;20385;20386;20387;20388 20382 29 1681700 9358500 NLDPLVYLLSK DFLKKYDELKSKNTRNLDPLVYLLSKLTED KNTRNLDPLVYLLSKLTEDKETLQYLQQNA R N L S K L 0 0 1 1 0 0 0 0 0 0 4 1 0 0 1 1 0 0 1 1 0 0 11 0 1273.7282 Q9BSJ2 Q9BSJ2 77 87 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.0086159 94.363 By MS/MS 5 1 1 1 2 215410 215410 0 10231 2307 10694 25379;25380 20389;20390;20391;20392 20391 4 13613 0 NLDQSGTNVAK VVELVNKLRARAQARNLDQSGTNVAKVMKE AQARNLDQSGTNVAKVMKEFVGGNTPNVLT R N L A K V 1 0 2 1 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1145.5677 Q9BQE5 Q9BQE5 183 193 APOL2 Apolipoprotein L2 yes yes 2 0.00020874 142.36 By MS/MS 7 0 1 1 1371600 1371600 0 10232 2292 10695 25381 20393 20393 1 21531 0 NLEAMNPPLFLR TYRESIKDLADYASKNLEAMNPPLFLRFLN ASKNLEAMNPPLFLRFLNLLMNDAIFLLDE K N L L R F 1 1 2 0 0 0 1 0 0 0 3 0 1 1 2 0 0 0 0 0 0 0 12 0 1413.7439 Q14139 Q14139 775 786 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 2.4587E-05 175.15 By MS/MS 3 0 1 1 148360 148360 0 10233 1421 10696 25382 20394;20395 20395 812 2 2714.6 0 NLEAVETLGSTSTICSDK TLTAKRMARKNCLVKNLEAVETLGSTSTIC AVETLGSTSTICSDKTGTLTQNRMTVAHMW K N L D K T 1 0 1 1 1 0 2 1 0 1 2 1 0 0 0 3 3 0 0 1 0 0 18 0 1923.9095 P05023;P13637;P50993;Q13733 P05023 360 377 ATP1A1;ATP1A3;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 2 3.7648E-105 408.77 By MS/MS 3 1.41 1 1 1 1 1 5 8051400 8051400 0 10234 481 10697 25383;25384;25385;25386;25387 20396;20397;20398;20399 20396 4 1112100 0 NLEAVETLGSTSTICSDKTGTLTQNR TLTAKRMARKNCLVKNLEAVETLGSTSTIC STICSDKTGTLTQNRMTVAHMWFDNQIHEA K N L N R M 1 1 2 1 1 1 2 2 0 1 3 1 0 0 0 3 6 0 0 1 0 0 26 1 2795.3607 P05023;P13637;P50993;Q13733 P05023 360 385 ATP1A1;ATP1A3;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 3 2.0181E-05 95.51 By MS/MS 4 0 1 1 1350800 1350800 0 10235 481 10698 25388 20400 20400 1 127120 0 NLEELNISSAQ YLESPLSSETTQLSKNLEELNISSAQ____ QLSKNLEELNISSAQ_______________ K N L A Q - 1 0 2 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1216.5935 Q9Y2R5 Q9Y2R5 120 130 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 4.3443E-26 289.22 By MS/MS By matching 9.33 0.471 2 1 2 1 8764100 8738300 25769 10236 2840 10699 25389;25390;25391 20401;20402 20401 2 426340 58761 NLEGNHDQHGR ASFEAMASIINRLHKNLEGNHDQHGRNSLL RLHKNLEGNHDQHGRNSLLASYIHYVFRLP K N L G R N 0 1 2 1 0 1 1 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1275.5705 Q96N67 Q96N67 831 841 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 1.3435E-05 169.99 By MS/MS 2.5 0.5 1 1 2 555000 555000 0 10237 2201 10700 25392;25393 20403 20403 1 158110 0 NLEIDALNQR FEAALKAKEATIAERNLEIDALNQRKAAHS TIAERNLEIDALNQRKAAHSAELEAVLLAL R N L Q R K 1 1 2 1 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1184.6149 O95613 O95613 1874 1883 PCNT Pericentrin yes yes 2 0.026119 83.862 By MS/MS 1 0 1 1 109700 109700 0 10238 419 10701 25394 20404 20404 1 26434 0 NLEIELLK RLQQITNIQAEIYQKNLEIELLKLEKDTAD QAEIYQKNLEIELLKLEKDTADVVHPFFLA K N L L K L 0 0 1 0 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 970.5699 Q9NVX0 Q9NVX0 64 71 HAUS2 HAUS augmin-like complex subunit 2 yes yes 2 0.013735 106.6 By MS/MS 8 0 1 1 136460 136460 0 10239 2606 10702 25395 20405;20406 20405 2 1722.8 0 NLEIKTDTAK PPSNYEILVKAARSRNLEIKTDTAKSLAES AARSRNLEIKTDTAKSLAESLDQAESPTFP R N L A K S 1 0 1 1 0 0 1 0 0 1 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1131.6136 Q9Y2L1 Q9Y2L1 710 719 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0017612 132.88 By MS/MS By matching 4 0 2 1 1 1601600 1583800 17856 10240 2834 10703 25396;25397 20407 20407 1 149040 38044 NLELLSVAR ENEAVAPEFTNRNPRNLELLSVARKERGWR TNRNPRNLELLSVARKERGWRTVFPSREFW R N L A R K 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5869 Q9H0U6 Q9H0U6 55 63 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 2.5474E-10 204.79 By MS/MS By matching 9.25 0.433 3 1 3 1 7714000 7651200 62802 10241 2417 10704 25398;25399;25400;25401 20408;20409;20410 20408 3 159330 143210 NLELLSVARK ENEAVAPEFTNRNPRNLELLSVARKERGWR NRNPRNLELLSVARKERGWRTVFPSREFWH R N L R K E 1 1 1 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 1 1141.6819 Q9H0U6 Q9H0U6 55 64 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 5.0451E-07 179.81 By MS/MS 9 0 1 1 2812300 2812300 0 10242 2417 10705 25402 20411 20411 1 55347 0 NLELNDDTILNDIK CEFTPAPTPQEHLTKNLELNDDTILNDIKL KNLELNDDTILNDIKLADCEQFQMPDLCAE K N L I K L 0 0 3 3 0 0 1 0 0 2 3 1 0 0 0 0 1 0 0 0 0 0 14 0 1628.8257 Q6P3X3 Q6P3X3 314 327 TTC27 Tetratricopeptide repeat protein 27 yes yes 2 1.6769E-43 322.23 By MS/MS 4 0 1 1 343210 343210 0 10243 1709 10706 25403 20412 20412 1 32299 0 NLELNGLILR CKALKGCLSISSVLKNLELNGLILRERDLT SSVLKNLELNGLILRERDLTILAKGLNKSA K N L L R E 0 1 2 0 0 0 1 1 0 1 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1153.6819 Q5JTW2 Q5JTW2 124 133 CEP78 Centrosomal protein of 78 kDa yes yes 2 7.6792E-11 218.58 By MS/MS 5 0 1 1 258900 258900 0 10244 1612 10707 25404 20413 20413 1 2596.7 0 NLEQENQNLR SDMEYRLKELEYCKRNLEQENQNLRMQVSE EYCKRNLEQENQNLRMQVSETCTGPMLQAK R N L L R M 0 1 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1256.6109 Q8WVV4 Q8WVV4 428 437 POF1B Protein POF1B yes yes 2 5.5297E-06 176.38 By MS/MS 10 0 1 1 75416 0 75416 10245 2030 10708 25405 20414 20414 1 0 96553 NLEQYNKLDQDLNEVK AIHKDLEDTEANKEKNLEQYNKLDQDLNEV LEQYNKLDQDLNEVKARVEELDRKYYEVKN K N L V K A 0 0 3 2 0 2 2 0 0 0 3 2 0 0 0 0 0 0 1 1 0 0 16 1 1961.9694 Q9UQE7 Q9UQE7 430 445 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0039607 97.836 By MS/MS 3 0 1 1 405110 405110 0 10246 2807 10709 25406 20415 20415 1 7412.5 0 NLESALR RKITRTSFLDDAFRKNLESALRFGNPLLVQ FLDDAFRKNLESALRFGNPLLVQDVESYDP K N L L R F 1 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 801.43447 Q14204 Q14204 3622 3628 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.013694 125.81 By MS/MS 1.5 0.5 1 1 2 2619100 2619100 0 10247 1433 10710 25407;25408 20416;20417;20418 20417 3 719570 0 NLETLQQELGIEGENR QYVWFNIGSVDTFERNLETLQQELGIEGEN LETLQQELGIEGENRVPVVYIAESDGSFLL R N L N R V 0 1 2 0 0 2 4 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 16 0 1841.9119 Q9Y4W6 Q9Y4W6 225 240 AFG3L2 AFG3-like protein 2 yes yes 2 6.2253E-45 337.22 By MS/MS 5 0 1 1 1128700 1128700 0 10248 2902 10711 25409 20419 20419 1 11320 0 NLFEDQNTLTSICEK AIQFLASVCERPHYKNLFEDQNTLTSICEK NLFEDQNTLTSICEKVIVPNMEFRAADEEA K N L E K V 0 0 2 1 1 1 2 0 0 1 2 1 0 1 0 1 2 0 0 0 0 0 15 0 1810.8407 P55060 P55060 332 346 CSE1L Exportin-2 yes yes 2 4.4817E-33 307.77 By MS/MS 4.5 0.5 1 1 2 17713000 17713000 0 10249 1053 10712 25410;25411 20420;20421;20422 20420 3 1550300 0 NLFEEYR STIKREREVFNCMLRNLFEEYRFFPQYPDK EVFNCMLRNLFEEYRFFPQYPDKELHITAC R N L Y R F 0 1 1 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 7 0 969.4556 A5YKK6 A5YKK6 894 900 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.051658 89.752 By MS/MS 2.5 0.5 1 1 2 1086600 1086600 0 10250 19 10713 25412;25413 20423 20423 1 295260 0 NLFELAR DLMSKWLGESEKLVKNLFELARQHKPSIIF GESEKLVKNLFELARQHKPSIIFIDEVDSL K N L A R Q 1 1 1 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 861.47085 Q9UN37 Q9UN37 211 217 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 2 0.034145 101.6 By MS/MS 6 0 1 1 1244500 1244500 0 10251 2784 10714 25414 20424 20424 1 8554.9 0 NLFEQLVR ______________________________ TMMLNVRNLFEQLVRRVEILSEGNEVQFIQ R N L V R R 0 1 1 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 1017.5607 Q9H0H5 Q9H0H5 10 17 RACGAP1 Rac GTPase-activating protein 1 yes yes 2 0.0038052 131.03 By MS/MS 5 0 1 1 402780 402780 0 10252 2410 10715 25415 20425 20425 1 4039.7 0 NLFILAYNYK KNVMNKVSEMSSFQRNLFILAYNYKMEQIS SSFQRNLFILAYNYKMEQISKGRNTPLCDS R N L Y K M 1 0 2 0 0 0 0 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 10 0 1257.6758 O95573 O95573 407 416 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 2.8655E-05 162.25 By MS/MS 5 0 1 1 236640 236640 0 10253 417 10716 25416 20426 20426 1 2373.4 0 NLFNVVDCK VTLMQLPTRQEIRVRNLFNVVDCKLHWQKN QEIRVRNLFNVVDCKLHWQKNGDYLCVKVD R N L C K L 0 0 2 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 9 0 1107.5383 P55884 P55884 508 516 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 9.1386E-07 181.41 By MS/MS By matching 4.5 1.91 2 1 3 1 1 1 1 8 2 77039000 76887000 151460 10254 1065 10717 25417;25418;25419;25420;25421;25422;25423;25424;25425;25426 20427;20428;20429;20430;20431;20432;20433;20434 20432 8 5611900 261940 NLGALYR KACKVSSPTVNTTLRNLGALYRRQGKLEAA PTVNTTLRNLGALYRRQGKLEAAETLEECA R N L Y R R 1 1 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 805.44464 Q07866;Q9NSK0 Q9NSK0 469 475 KLC1;KLC4 Kinesin light chain 1;Kinesin light chain 4 no no 2 0.03963 97.473 By MS/MS 5 0 1 1 908510 908510 0 10255 2572;1303 10718 25427 20435 20435 1 9111.9 0 NLGIPIITVLGDSK QLAVAMGPNIKQHVKNLGIPIITVLGDSKN KNLGIPIITVLGDSKNNVRAAALATVNAWA K N L S K N 0 0 1 1 0 0 0 2 0 3 2 1 0 0 1 1 1 0 0 1 0 0 14 0 1438.8395 Q14008 Q14008 941 954 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.024958 82.85 By MS/MS 2 0 1 1 143800 143800 0 10256 1417 10719 25428 20436 20436 1 48638 0 NLGLEELGIELDPR CDVLLVCIGRRPFTKNLGLEELGIELDPRG KNLGLEELGIELDPRGRIPVNTRFQTKIPN K N L P R G 0 1 1 1 0 0 3 2 0 1 4 0 0 0 1 0 0 0 0 0 0 0 14 0 1566.8253 P09622 P09622 321 334 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 2.39E-07 254.18 By MS/MS 6 0 1 1 2800100 2800100 0 10257 539 10720 25429 20437 20437 1 19248 0 NLGSINTELQDVQR IQKTKKLYIDSCARRNLGSINTELQDVQRI RNLGSINTELQDVQRIMVANIEEVLQRGEA R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 O75396 O75396 134 147 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 4.1085E-70 374.54 By MS/MS 9 0.816 1 1 1 3 18631000 18631000 0 10258 323 10721 25430;25431;25432 20438;20439;20440 20439 3 282090 0 NLGTALAELR IQDQASAMQLSQCAKNLGTALAELRTAAQK SQCAKNLGTALAELRTAAQKAQEACGPLEM K N L L R T 2 1 1 0 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1056.5928 Q9Y490 Q9Y490 1026 1035 TLN1 Talin-1 yes yes 2 2.6771E-11 223.31 By MS/MS 3 0.816 1 1 1 3 1994200 1994200 0 10259 2888 10722 25433;25434;25435 20441;20442 20441 2 560120 0 NLGVVVAPHTLK KWELNPEIVARHFFKNLGVVVAPHTLKLPE FFKNLGVVVAPHTLKLPEEPITRWGEYWCE K N L L K L 1 0 1 0 0 0 0 1 1 0 2 1 0 0 1 0 1 0 0 3 0 0 12 0 1246.7398 Q9BYD2 Q9BYD2 196 207 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.00064249 131.82 By MS/MS 8 0 1 1 2475300 2475300 0 10260 2369 10723 25436 20443 20443 1 31250 0 NLHSEISGKR FGDSNTVMRFLNEQKNLHSEISGKRDKSEE LNEQKNLHSEISGKRDKSEEVQKIAELCAN K N L K R D 0 1 1 0 0 0 1 1 1 1 1 1 0 0 0 2 0 0 0 0 0 0 10 1 1139.6047 P15924 P15924 932 941 DSP Desmoplakin yes yes 3 0.0025542 123.11 By MS/MS By MS/MS 2.5 0.957 1 2 2 1 4 2 2800800 1452900 1347900 10261 628 10724 25437;25438;25439;25440;25441;25442 20444;20445;20446 20445 3 272760 375450 NLIAFSEDGSDPYVR SSQRNKLIVVVHACRNLIAFSEDGSDPYVR NLIAFSEDGSDPYVRMYLLPDKRRSGRRKT R N L V R M 1 1 1 2 0 0 1 1 0 1 1 0 0 1 1 2 0 0 1 1 0 0 15 0 1681.7948 A0FGR8 A0FGR8 812 826 ESYT2 Extended synaptotagmin-2 yes yes 2 5.8586E-33 305.3 By MS/MS 4 0 1 1 1755500 1755500 0 10262 6 10725 25443 20447 20447 1 165200 0 NLIDAGVDALR LQVIGGNVVTAAQAKNLIDAGVDALRVGMG AQAKNLIDAGVDALRVGMGSGSICITQEVL K N L L R V 2 1 1 2 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1155.6248 P12268 P12268 312 322 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 5.9034E-05 173.24 By MS/MS 7.75 1.48 1 1 1 1 4 8930800 8930800 0 10263 590 10726 25444;25445;25446;25447 20448;20449;20450;20451 20449 4 75831 0 NLIDEDGNNQWPEGLK SMRKKVCDIAAELARNLIDEDGNNQWPEGL LIDEDGNNQWPEGLKFLFDSVSSQNVGLRE R N L L K F 0 0 3 2 0 1 2 2 0 1 2 1 0 0 1 0 0 1 0 0 0 0 16 0 1840.8592 O00410 O00410 119 134 IPO5 Importin-5 yes yes 2 0.00028892 173.33 By MS/MS 4 0 1 1 837480 837480 0 10264 103 10727 25448 20452 20452 1 78812 0 NLIIEAVTNLR GQDKPHETYRLLKRRNLIIEAVTNLRLIES LKRRNLIIEAVTNLRLIESLFTIQKMIMDQ R N L L R L 1 1 2 0 0 0 1 0 0 2 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1254.7296 Q12789 Q12789 619 629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 1.3881E-05 169.58 By MS/MS 2 0 1 1 60198 60198 0 10265 1328 10728 25449 20453;20454 20453 2 20361 0 NLILSAFPR YGFCDVIPPNCIQLRNLILSAFPRNMRLPD NCIQLRNLILSAFPRNMRLPDPFTPNLKVD R N L P R N 1 1 1 0 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 9 0 1029.5971 A5YKK6 A5YKK6 2130 2138 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0014637 128.12 By MS/MS 2 0 1 1 446100 446100 0 10266 19 10729 25450 20455 20455 1 150890 0 NLILVVR IGGLLDVDCSEDVIKNLILVVRGQFSTDEL DCSEDVIKNLILVVRGQFSTDELVAEVEKR K N L V R G 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 7 0 825.54362 Q00610 Q00610 831 837 CLTC Clathrin heavy chain 1 yes yes 2 0.040168 97.068 By MS/MS 2.5 1.12 1 1 1 1 4 1135300 1135300 0 10267 1262 10730 25451;25452;25453;25454 20456 20456 1 121550 0 NLKLGIHEDSTNR EDKENYKKFYEAFSKNLKLGIHEDSTNRRR SKNLKLGIHEDSTNRRRLSELLRYHTSQSG K N L N R R 0 1 2 1 0 0 1 1 1 1 2 1 0 0 0 1 1 0 0 0 0 0 13 1 1495.7743 P08238 P08238 436 448 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0016322 110.8 By MS/MS 4.5 0.5 1 1 2 2967700 2967700 0 10268 521 10731 25455;25456 20457 20457 1 240580 0 NLKNEITK NRFAVLDRMHSLLIKNLKNEITKKVQVPNC MHSLLIKNLKNEITKKVQVPNCDEIFYAGT K N L T K K 0 0 2 0 0 0 1 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 958.54475 P53621 P53621 439 446 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0069343 148.99 By MS/MS 2.5 1.12 1 1 1 1 4 1541800 1541800 0 10269 1034 10732 25457;25458;25459;25460 20458 20458 1 133200 0 NLKNEITKK NRFAVLDRMHSLLIKNLKNEITKKVQVPNC HSLLIKNLKNEITKKVQVPNCDEIFYAGTG K N L K K V 0 0 2 0 0 0 1 0 0 1 1 3 0 0 0 0 1 0 0 0 0 0 9 2 1086.6397 P53621 P53621 439 447 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0036435 113.71 By MS/MS 3 0 1 1 0 0 0 10270 1034 10733 25461 20459 20459 1 0 0 NLLFNDNTECLAR SDCPDKFCLFQSETKNLLFNDNTECLARLH TKNLLFNDNTECLARLHGKTTYEKYLGPQY K N L A R L 1 1 3 1 1 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 13 0 1578.746 P02788 P02788 659 671 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 1.3265E-08 188.27 By matching By MS/MS 1.5 0.5 1 1 1 1 205220 47518 157700 10271 459 10734 25462;25463 20460 20460 1 16072 157700 NLLGLYPR WWWARLNDKEGYVPRNLLGLYPRIKPRQRS KEGYVPRNLLGLYPRIKPRQRSLA______ R N L P R I 0 1 1 0 0 0 0 1 0 0 3 0 0 0 1 0 0 0 1 0 0 0 8 0 944.54435 Q13625;Q96KQ4 Q13625 1112 1119 TP53BP2;PPP1R13B Apoptosis-stimulating of p53 protein 2;Apoptosis-stimulating of p53 protein 1 yes no 2 0.015747 104.37 By MS/MS 3 0 1 1 132900 132900 0 10272 1406 10735 25464 20461 20461 1 2431.7 0 NLLHSLQSSGIGSK AIQQLAEAQPEATAKNLLHSLQSSGIGSKA KNLLHSLQSSGIGSKAGVPSKSSGSAALLA K N L S K A 0 0 1 0 0 1 0 2 1 1 3 1 0 0 0 4 0 0 0 0 0 0 14 0 1439.7732 Q92616 Q92616 88 101 GCN1L1 Translational activator GCN1 yes yes 2 0.00093801 126.32 By MS/MS 2 0 1 1 504910 504910 0 10273 2064 10736 25465 20462 20462 1 170780 0 NLLLLANSTEEQQK IIAPCKVYYDISTAKNLLLLANSTEEQQKW KNLLLLANSTEEQQKWVSRLVKKIPKKPPA K N L Q K W 1 0 2 0 0 2 2 0 0 0 4 1 0 0 0 1 1 0 0 0 0 0 14 0 1599.8468 O75116 O75116 1326 1339 ROCK2 Rho-associated protein kinase 2 yes yes 2 1.1681E-43 327.1 By MS/MS 3 0 1 1 301520 301520 0 10274 291 10737 25466 20463 20463 1 5517 0 NLLNSVIGR SRASRDLLKEFPQPKNLLNSVIGRALGISH EFPQPKNLLNSVIGRALGISHAKDKLVYVH K N L G R A 0 1 2 0 0 0 0 1 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 984.57163 Q7L2E3 Q7L2E3 55 63 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00071472 140.11 By MS/MS 5.75 2.38 1 1 1 1 4 1251700 1251700 0 10275 1761 10738 25467;25468;25469;25470 20464;20465;20466 20464 3 47284 0 NLLQELK NAAEESLPEIQKEHRNLLQELKVIQENEHA PEIQKEHRNLLQELKVIQENEHALQKDALS R N L L K V 0 0 1 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 856.50182 Q9NTJ3 Q9NTJ3 992 998 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0057557 152.47 By MS/MS 3 0 1 1 1536600 1536600 0 10276 2575 10739 25471 20467 20467 1 28115 0 NLLQLSPETK QFMAQFHEKIYQMLKNLLQLSPETKHCILS YQMLKNLLQLSPETKHCILSWLGNCLHANA K N L T K H 0 0 1 0 0 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 10 0 1141.6343 Q14139 Q14139 387 396 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.0089633 96.665 By MS/MS 3 0 1 1 223560 223560 0 10277 1421 10740 25472 20468 20468 1 4090.4 0 NLLQVDLTK RFPSHFSSDLKDLLRNLLQVDLTKRFGNLK LKDLLRNLLQVDLTKRFGNLKNGVNDIKNH R N L T K R 0 0 1 1 0 1 0 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1042.6023 P17612;P22694 P17612 272 280 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 2 0.00098301 134.23 By MS/MS 7 0 1 1 1872900 1872900 0 10278 644;695 10741 25473 20469 20469 1 29401 0 NLLQVDLTKR RFPSHFSSDLKDLLRNLLQVDLTKRFGNLK KDLLRNLLQVDLTKRFGNLKNGVNDIKNHK R N L K R F 0 1 1 1 0 1 0 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 10 1 1198.7034 P17612;P22694 P17612 272 281 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 2 0.02947 74.533 By MS/MS 7 0 1 1 2786300 2786300 0 10279 644;695 10742 25474 20470 20470 1 43740 0 NLLTAAADAIER EELVSERTEAFTIARNLLTAAADAIERIMS IARNLLTAAADAIERIMSSYKEVTELAGYT R N L E R I 4 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1256.6725 P33897 P33897 390 401 ABCD1 ATP-binding cassette sub-family D member 1 yes yes 2 0.0055132 125.97 By MS/MS 5 0 1 1 0 0 0 10280 803 10743 25475 20471 20471 1 0 0 NLLTGLVR RRMGLGPESRIHLLRNLLTGLVRHERIEAP SRIHLLRNLLTGLVRHERIEAPWARVDEMR R N L V R H 0 1 1 0 0 0 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 8 0 884.54435 Q9NRX2 Q9NRX2 31 38 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.0041431 129.47 By MS/MS By matching 9 0 2 1 1 4797500 4771600 25822 10281 2561 10744 25476;25477 20472 20472 1 93906 58882 NLLTPLMEK VNSEYPAERKQALMRNLLTPLMEKFKILLE KQALMRNLLTPLMEKFKILLEKLMLAQDEE R N L E K F 0 0 1 0 0 0 1 0 0 0 3 1 1 0 1 0 1 0 0 0 0 0 9 0 1057.5842 O43592 O43592 619 627 XPOT Exportin-T yes yes 2 0.015897 90.709 By MS/MS 4 0 1 1 274490 274490 0 10282 220 10745 25478 20473 20473 1 25831 0 NLLTVTSSDEMMK RVVQMLGSLGGQINKNLLTVTSSDEMMKSY NKNLLTVTSSDEMMKSYVAWDREKRLSFAV K N L M K S 0 0 1 1 0 0 1 0 0 0 2 1 2 0 0 2 2 0 0 1 0 0 13 0 1467.6949 P78527 P78527 869 881 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 7.9375E-12 234.3 By MS/MS 1.88 0.781 3 3 2 8 2253000 2253000 0 10283 1225 10746;10747;10748 25479;25480;25481;25482;25483;25484;25485;25486 20474;20475;20476;20477;20478;20479;20480 20476 729;730 7 640540 0 NLLVAFR TFGFIQVMDGEKDPRNLLVAFRIVHDLISR MDGEKDPRNLLVAFRIVHDLISRDYSLGPF R N L F R I 1 1 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 7 0 831.49667 Q96T76 Q96T76 189 195 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.025327 108.24 By MS/MS 4.5 0.5 1 1 2 1336400 1336400 0 10284 2240 10749 25487;25488 20481 20481 1 111920 0 NLMTSEIHNTVK HFANKKCQDVIVAARNLMTSEIHNTVKIIP AARNLMTSEIHNTVKIIPDSKINVPELPTP R N L V K I 0 0 2 0 0 0 1 0 1 1 1 1 1 0 0 1 2 0 0 1 0 0 12 0 1385.6973 O43264 O43264 413 424 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 6.5222E-06 182.92 By MS/MS 4 0 2 2 1736200 1736200 0 10285 200 10750;10751 25489;25490 20482;20483 20483 102 2 163390 0 NLNGTLHELLR ILVTNLDFHDEQKRRNLNGTLHELLRMNIV QKRRNLNGTLHELLRMNIVPIVNTNDAVVP R N L L R M 0 1 2 0 0 0 1 1 1 0 4 0 0 0 0 0 1 0 0 0 0 0 11 0 1278.7044 P54886 P54886 202 212 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.054659 72.643 By MS/MS 5 0 1 1 159640 159640 0 10286 1048 10752 25491 20484 20484 0 1601.1 0 NLPEGVAMEVTK LTGSTADVYLEYIQRNLPEGVAMEVTKTQL IQRNLPEGVAMEVTKTQLEQLPEHIKEPIW R N L T K T 1 0 1 0 0 0 2 1 0 0 1 1 1 0 1 0 1 0 0 2 0 0 12 0 1286.654 P82664 P82664 163 174 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 2 0.0016027 113.95 By MS/MS 9.33 0.471 2 1 3 4821100 4821100 0 10287 1231 10753;10754 25492;25493;25494 20485;20486 20486 742 2 104950 0 NLPLELDFLNEGR FPEFEFMWLVDEAKKNLPLELDFLNEGRNA KKNLPLELDFLNEGRNAEKVSQMLRHFDFL K N L G R N 0 1 2 1 0 0 2 1 0 0 4 0 0 1 1 0 0 0 0 0 0 0 13 0 1528.7886 Q86TW2 Q86TW2 226 238 ADCK1 Uncharacterized aarF domain-containing protein kinase 1 yes yes 2 4.2883E-05 179.67 By MS/MS 6 0 1 1 526080 526080 0 10288 1815 10755 25495 20487;20488 20487 2 3616.4 0 NLPVFQPGVK YQRSWLKVTDYIAEKNLPVFQPGVKLRDKE YIAEKNLPVFQPGVKLRDKERQIIKERFKG K N L V K L 0 0 1 0 0 1 0 1 0 0 1 1 0 1 2 0 0 0 0 2 0 0 10 0 1097.6233 Q9UPT5 Q9UPT5 634 643 EXOC7 Exocyst complex component 7 yes yes 2 0.046202 82.241 By MS/MS 5 0 1 1 1842900 1842900 0 10289 2801 10756 25496 20489 20489 1 18483 0 NLQDAMQVCR LLRGASKEILSEVERNLQDAMQVCRNVLLD SEVERNLQDAMQVCRNVLLDPQLVPGGGAS R N L C R N 1 1 1 1 1 2 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 0 1233.5594 P49368 P49368 390 399 CCT3 T-complex protein 1 subunit gamma yes yes 2 1.7007E-10 209.21 By MS/MS By MS/MS 6.71 1.83 2 3 1 1 6 1 17507000 17458000 49488 10290 947 10757;10758 25497;25498;25499;25500;25501;25502;25503 20490;20491;20492;20493;20494;20495 20492 520 6 154200 50711 NLQEEIDALESR HSQEETQEMLEEAKKNLQEEIDALESRVES AKKNLQEEIDALESRVESIQRVLADLKVQL K N L S R V 1 1 1 1 0 1 3 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1415.6892 Q9NQP4 Q9NQP4 93 104 PFDN4 Prefoldin subunit 4 yes yes 2 2.4524E-06 208.33 By MS/MS 10 0 1 1 140420 140420 0 10291 2538 10759 25504 20496;20497 20497 2 7568.3 0 NLQEGNLER IQMLTLLRAFEARDRNLQEGNLERVNFWSA FEARDRNLQEGNLERVNFWSAVNVAVLLLV R N L E R V 0 1 2 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1071.5309 Q13445 Q13445 184 192 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 2 0.00049743 146.79 By MS/MS 8 0 1 1 751280 751280 0 10292 1387 10760 25505 20498 20498 1 9484.8 0 NLQEGQVTDPR KDDTTTKRWLAQLVKNLQEGQVTDPRGIPL QLVKNLQEGQVTDPRGIPLPPQ________ K N L P R G 0 1 1 1 0 2 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1255.6157 Q92600 Q92600 282 292 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 6.1438E-05 155.26 By MS/MS 8 0 1 1 1747800 1747800 0 10293 2060 10761 25506 20499 20499 1 22066 0 NLQEILR N L L R 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 884.50797 REV__P31948 yes yes 2 0.009865 135.77 By MS/MS 4.33 0.471 2 1 3 3742000 3742000 0 + 10294 2958 10762 25507;25508;25509 20500 20500 1 316350 0 NLQEIQQAGER AAETEGISELPHVERNLQEIQQAGERLRSR HVERNLQEIQQAGERLRSRTLTRTSQETAD R N L E R L 1 1 1 0 0 3 2 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1284.6422 Q8N1F7 Q8N1F7 32 42 NUP93 Nuclear pore complex protein Nup93 yes yes 2 2.0807E-09 217.02 By MS/MS 4 0 1 1 2536700 2536700 0 10295 1903 10763 25510 20501 20501 1 238720 0 NLQLLMDR KHELLSLASSNHLGKNLQLLMDRVDEMSQD SSNHLGKNLQLLMDRVDEMSQDIVKYNTYM K N L D R V 0 1 1 1 0 1 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 8 0 1001.5328 O15372 O15372 242 249 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.0071584 115.49 By MS/MS 7 0 1 1 1016900 1016900 0 10296 186 10764 25511 20502 20502 1 15963 0 NLQSVVLSK KTQGVIKYMGPAGAKNLQSVVLSKMNFESF GPAGAKNLQSVVLSKMNFESFVKDLLLVRQ K N L S K M 0 0 1 0 0 1 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 9 0 986.57605 P43246 P43246 74 82 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0018717 122.94 By MS/MS 4 0 1 1 1609800 1609800 0 10297 894 10765 25512 20503 20503 1 151500 0 NLQTVNVDEN KLYTLVTYVPVTTFKNLQTVNVDEN_____ VTTFKNLQTVNVDEN_______________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 8.3414E-05 155.06 By MS/MS By matching 10 0 2 1 1 2642500 2559500 83059 10298 1183 10766 25513;25514 20504 20504 1 137950 106340 NLQYYDISAK DRKVKAKSIVFHRKKNLQYYDISAKSNYNF FHRKKNLQYYDISAKSNYNFEKPFLWLARK K N L A K S 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 0 10 0 1213.5979 P62826 P62826 143 152 RAN GTP-binding nuclear protein Ran yes yes 2 7.6416E-05 157.34 By MS/MS 9 0.816 1 1 1 3 8094300 8094300 0 10299 1172 10767 25515;25516;25517 20505;20506 20506 2 128600 0 NLRDIDEVSSLLR KAHEILPNLVCCSAKNLRDIDEVSSLLRTS AKNLRDIDEVSSLLRTSIMSKQYGNEVFLA K N L L R T 0 2 1 2 0 0 1 0 0 1 3 0 0 0 0 2 0 0 0 1 0 0 13 1 1528.8209 P50990 P50990 153 165 CCT8 T-complex protein 1 subunit theta yes yes 2;3 3.3616E-07 213.63 By MS/MS 6.43 0.904 1 3 2 1 7 89750000 89750000 0 10300 984 10768 25518;25519;25520;25521;25522;25523;25524 20507;20508;20509;20510 20507 4 626580 0 NLSAQCQEVR HTDRQDIQKSMAAFKNLSAQCQEVRKRKEL MAAFKNLSAQCQEVRKRKELELQILTEAIR K N L V R K 1 1 1 0 1 2 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1203.5666 Q14155 Q14155 443 452 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 6.7187E-05 156.16 By MS/MS 4.5 0.5 1 1 2 1104800 1104800 0 10301 1423 10769 25525;25526 20511 20511 1 30171 0 NLSDSEKELYIQHAK DSPQEKLKTVKENWKNLSDSEKELYIQHAK NLSDSEKELYIQHAKEDETRYHNEMKSWEE K N L A K E 1 0 1 1 0 1 2 0 1 1 2 2 0 0 0 2 0 0 1 0 0 0 15 1 1773.8897 Q00059 Q00059 191 205 TFAM Transcription factor A, mitochondrial yes yes 3 0.00052367 155.14 By MS/MS 8.5 0.5 1 1 2 5446300 5446300 0 10302 1258 10770 25527;25528 20512 20512 1 100330 0 NLSDVATKQEGLESVLK SNSPRLVQNCLWTLRNLSDVATKQEGLESV SDVATKQEGLESVLKILVNQLSVDDVNVLT R N L L K I 1 0 1 1 0 1 2 1 0 0 3 2 0 0 0 2 1 0 0 2 0 0 17 1 1829.9735 P14923 P14923 378 394 JUP Junction plakoglobin yes yes 2;3 9.7052E-17 225.21 By matching By MS/MS 3.75 0.829 2 1 1 2 2 1965400 704030 1261300 10303 621 10771 25529;25530;25531;25532 20513;20514 20514 2 35552 160550 NLSEEGLLR VSTKCCKKSIVRLVRNLSEEGLLRLYRTTV IVRLVRNLSEEGLLRLYRTTVIQDGIKKKV R N L L R L 0 1 1 0 0 0 2 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1029.5455 Q12789 Q12789 665 673 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0003263 157.99 By MS/MS 2.5 1.12 1 1 1 1 4 2052100 2052100 0 10304 1328 10772 25533;25534;25535;25536 20515;20516 20515 2 470170 0 NLSEFFR VNMKEAAVEDLHHYRNLSEFFRRKLKPQAR VEDLHHYRNLSEFFRRKLKPQARPVCGLHS R N L F R R 0 1 1 0 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 7 0 911.45012 Q9UG56 Q9UG56 164 170 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.0060444 151.29 By MS/MS 7.5 0.5 1 1 2 1669500 1669500 0 10305 2718 10773 25537;25538 20517;20518 20518 2 22206 0 NLSGPDDLLIDK TVRSWIRCVLQMYIKNLSGPDDLLIDKNLE YIKNLSGPDDLLIDKNLEEAVEKEYMKQLV K N L D K N 0 0 1 3 0 0 0 1 0 1 3 1 0 0 1 1 0 0 0 0 0 0 12 0 1298.6718 Q6ZRQ5 Q6ZRQ5 828 839 MMS22L Protein MMS22-like yes yes 2 0.005106 103.26 By MS/MS 3 0 1 1 64763 64763 0 10306 1744 10774 25539 20519 20519 1 1185 0 NLSGQPNFPCR FVILPLNLVGTILGRNLSGQPNFPCRVNAV ILGRNLSGQPNFPCRVNAVPRPIPEKKWFM R N L C R V 0 1 2 0 1 1 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1288.5983 Q9HD45 Q9HD45 419 429 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 3.7981E-09 209.73 By MS/MS 2.5 1.12 1 1 1 1 4 2610900 2610900 0 10307 2519 10775 25540;25541;25542;25543 20520;20521 20521 2 539170 0 NLSPGAVESDVR DQTVRVWDISGLRKKNLSPGAVESDVRGIT RKKNLSPGAVESDVRGITGVDLFGTTDAVV K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0057587 101.35 By MS/MS 2 0.816 1 1 1 3 6619900 6619900 0 10308 1034 10776 25544;25545;25546 20522;20523 20523 1 592230 0 NLSSDEATNPISR GELNGNAGEREISLKNLSSDEATNPISRVL LKNLSSDEATNPISRVLNGNQQVVDTSLKQ K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.00016938 166.11 By MS/MS 5 0 1 1 1413800 1413800 0 10309 1789 10777 25547 20524 20524 1 14180 0 NLSSNEAISLEEIR KGFNKVVLKHLKKTKNLSSNEAISLEEIRI KNLSSNEAISLEEIRIRVVQMLGSLGGQIN K N L I R I 1 1 2 0 0 0 3 0 0 2 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1573.7948 P78527 P78527 839 852 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.1839E-12 246.63 By MS/MS 2 0.816 1 1 1 3 2457800 2457800 0 10310 1225 10778 25548;25549;25550 20525;20526;20527 20525 2 658820 0 NLSVEDAAR AVYCKFHYKTDQGIKNLSVEDAARLSQEDP TDQGIKNLSVEDAARLSQEDPDYGIRDLFN K N L A R L 2 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 973.48287 P04040 P04040 244 252 CAT Catalase yes yes 2 0.0003924 154.85 By matching By MS/MS 3.33 1.6 1 1 1 2 1 1 5 1286100 217750 1068300 10311 464 10779 25551;25552;25553;25554;25555;25556 20528;20529;20530 20528 3 20491 564830 NLSYQVHR DSDSKLVENCVCLLRNLSYQVHREIPQAER NCVCLLRNLSYQVHREIPQAERYQEAAPNV R N L H R E 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 1015.5199 O60716 O60716 585 592 CTNND1 Catenin delta-1 yes yes 2 0.038568 86.833 By MS/MS 4 0 1 1 977610 977610 0 10312 272 10780 25557 20531 20531 1 92000 0 NLTEDNSQNQDLIAK DSNPFLTQWVIYAIRNLTEDNSQNQDLIAK NLTEDNSQNQDLIAKMEEQGLADASLLKKV R N L A K M 1 0 3 2 0 2 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 15 0 1701.817 Q9UBB4 Q9UBB4 424 438 ATXN10 Ataxin-10 yes yes 2 2.3977E-16 269.14 By MS/MS 6.5 0.5 1 1 2 7796500 7796500 0 10313 2693 10781 25558;25559 20532 20532 1 109040 0 NLTNPNTVIILIGNK RSTYNHLSSWLTDARNLTNPNTVIILIGNK NLTNPNTVIILIGNKADLEAQRDVTYEEAK R N L N K A 0 0 4 0 0 0 0 1 0 3 2 1 0 0 1 0 2 0 0 1 0 0 15 0 1622.9356 P61106 P61106 111 125 RAB14 Ras-related protein Rab-14 yes yes 2 0.00073818 128.36 By MS/MS 8.5 0.5 1 1 2 212540 212540 0 10314 1110 10782 25560;25561 20533 20533 1 3362 0 NLTQDEMQR STLHRLYHLSREMRKNLTQDEMQRMSTRVL SREMRKNLTQDEMQRMSTRVLLATLSIPIT K N L Q R M 0 1 1 1 0 2 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 9 0 1133.5135 Q14152 Q14152 309 317 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 7.8535E-07 184.49 By MS/MS 3.33 1.49 1 2 2 2 1 1 9 14892000 14892000 0 10315 1422 10783;10784 25562;25563;25564;25565;25566;25567;25568;25569;25570 20534;20535;20536;20537;20538 20535 817 5 734180 0 NLTWTLSNLCR LAVPDMSSLACGYLRNLTWTLSNLCRNKNP GYLRNLTWTLSNLCRNKNPAPPIDAVEQIL R N L C R N 0 1 2 0 1 0 0 0 0 0 3 0 0 0 0 1 2 1 0 0 0 0 11 0 1376.6871 P52292 P52292 228 238 KPNA2 Importin subunit alpha-1 yes yes 2 3.2948E-09 211.86 By MS/MS 6 0 1 1 862780 862780 0 10316 1013 10785 25571 20539 20539 1 5931 0 NLVCTDLFTR HRNRVFHDFRNGLCRNLVCTDLFTRGIDIQ NGLCRNLVCTDLFTRGIDIQAVNVVINFDF R N L T R G 0 1 1 1 1 0 0 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 10 0 1237.6125 P26196 P26196 387 396 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 2 2.1125E-05 162.36 By MS/MS 6 0 1 1 1186300 1186300 0 10317 729 10786 25572 20540 20540 1 8154.9 0 NLVDSYVAIINK FSMDPQLERQVETIRNLVDSYVAIINKSIR TIRNLVDSYVAIINKSIRDLMPKTIMHLMI R N L N K S 1 0 2 1 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 2 0 0 12 0 1347.7398 P50570 P50570 658 669 DNM2 Dynamin-2 yes yes 2 1.6428E-08 208.33 By MS/MS 4 0 1 1 647960 647960 0 10318 977 10787 25573 20541 20541 1 60977 0 NLVEELPQPR LHLFPDEYIPEDILKNLVEELPQPRKIPKR EDILKNLVEELPQPRKIPKRLDEYTQEEID K N L P R K 0 1 1 0 0 1 2 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 10 0 1193.6404 Q9BYD1 Q9BYD1 140 149 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0010339 122.96 By MS/MS 9.5 0.5 1 1 2 4417200 4417200 0 10319 2368 10788 25574;25575 20542;20543 20542 2 108410 0 NLVELAELELK ELIDFKTRRVAAFRKNLVELAELELKHAKG AFRKNLVELAELELKHAKGNLQLLQNCLAV K N L L K H 1 0 1 0 0 0 3 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 11 0 1269.718 Q9UNH7 Q9UNH7 376 386 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 2 1.6547E-05 167.09 By MS/MS 6 0 1 1 339920 339920 0 10320 2788 10789 25576 20544 20544 1 2336.7 0 NLVESELQR NDGSRDAAKEALYRRNLVESELQRLRR___ EALYRRNLVESELQRLRR____________ R N L Q R L 0 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1086.5669 Q6P1N0 Q6P1N0 940 948 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.0013614 129.42 By MS/MS 3 0 1 1 625630 625630 0 10321 1701 10790 25577 20545 20545 1 11447 0 NLVLLVR DEKNDRTSLNRKLDRNLVLLVREKFGDQDV SLNRKLDRNLVLLVREKFGDQDVWILPQAE R N L V R E 0 1 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 7 0 825.54362 Q9H2W6 Q9H2W6 156 162 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 0.022538 110.34 By MS/MS 8 0 1 1 4203700 4203700 0 10322 2435 10791 25578 20546 20546 1 53071 0 NLVPLLLAPENLVEK GRLKDIDEDFKRELRNLVPLLLAPENLVEK NLVPLLLAPENLVEKEISGSKVTCRDLVEY R N L E K E 1 0 2 0 0 0 2 0 0 0 5 1 0 0 2 0 0 0 0 2 0 0 15 0 1660.9764 Q8NHH9 Q8NHH9 326 340 ATL2 Atlastin-2 yes yes 2;3 0.00036114 142.38 By MS/MS 5.67 0.471 1 2 3 2983200 2983200 0 10323 1968 10792 25579;25580;25581 20547;20548 20547 2 20630 0 NLVQCLLEK CVRSNNYVQEPECRRNLVQCLLEKQGTPVV EPECRRNLVQCLLEKQGTPVVQGSLELERV R N L E K Q 0 0 1 0 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1115.6009 Q7Z6M4 Q7Z6M4 72 80 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 0.0013614 129.42 By MS/MS 7 0 1 1 504820 504820 0 10324 1801 10793 25582 20549 20549 1 7924.7 0 NLYIISVK PVGAVINCADNTGAKNLYIISVKGIKGRLN ADNTGAKNLYIISVKGIKGRLNRLPAAGVG K N L V K G 0 0 1 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 1 0 0 8 0 948.56442 P62829 P62829 36 43 RPL23 60S ribosomal protein L23 yes yes 2 0.0034326 132.76 By MS/MS By matching 10 0 2 1 1 15029000 14905000 124000 10325 1173 10794 25583;25584 20550 20550 1 803310 158760 NLYPSSSPYTR QGDVPTPKQFVADVKNLYPSSSPYTRNWDK ADVKNLYPSSSPYTRNWDKLVGEIKEEEKN K N L T R N 0 1 1 0 0 0 0 0 0 0 1 0 0 0 2 3 1 0 2 0 0 0 11 0 1283.6146 Q9Y2Z0 Q9Y2Z0 275 285 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.052137 68.846 By MS/MS 7.5 0.5 1 1 2 1983700 1983700 0 10326 2850 10795 25585;25586 20551 20551 1 30288 0 NLYSDDIPHALR LSDTNMVDFAMDVYKNLYSDDIPHALREKR VYKNLYSDDIPHALREKRTTVVAQLKQLQA K N L L R E 1 1 1 2 0 0 0 0 1 1 2 0 0 0 1 1 0 0 1 0 0 0 12 0 1412.7048 P60228 P60228 60 71 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 0.00055649 133.42 By MS/MS 7.29 1.03 2 2 2 1 7 49624000 49624000 0 10327 1090 10796 25587;25588;25589;25590;25591;25592;25593 20552;20553 20553 2 383550 0 NMAALDAADR LKSLISVIHLITAARNMAALDAADRAKKK_ ITAARNMAALDAADRAKKK___________ R N M D R A 4 1 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1046.4815 O14735 O14735 200 209 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 0.0003174 139.15 By MS/MS By matching 9 0 3 2 1 2326200 2292400 33795 10328 135 10797;10798 25594;25595;25596 20554;20555 20555 79 2 45115 77064 NMDAIIVDSEK TQKKYQIAVTKVLGKNMDAIIVDSEKTGRD VLGKNMDAIIVDSEKTGRDCIQYIKEQRGE K N M E K T 1 0 1 2 0 0 1 0 0 2 0 1 1 0 0 1 0 0 0 1 0 0 11 0 1233.5911 Q14683 Q14683 541 551 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 7.6467E-05 153.95 By MS/MS 3 0 2 2 957290 957290 0 10329 1451 10799;10800 25597;25598 20556;20557 20557 851 2 17516 0 NMDDDRLSR RIPRRGAEDDRGPWRNMDDDRLSRRADDDR DRGPWRNMDDDRLSRRADDDRFPRRGDDSR R N M S R R 0 2 1 3 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 9 1 1120.4931 Q14152 Q14152 1142 1150 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00037628 148.94 By MS/MS 4 1.87 1 1 1 1 4 4740300 4740300 0 10330 1422 10801 25599;25600;25601;25602 20558;20559;20560 20558 3 223970 0 NMINIISR ILRKSLQAERNKPTKNMINIISRLQEVFGH ERNKPTKNMINIISRLQEVFGHAIKAAYPD K N M S R L 0 1 2 0 0 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 8 0 959.52224 P54136 P54136 72 79 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0015788 147.29 By MS/MS 5 0 1 1 1280000 1280000 0 10331 1043 10802 25603 20561 20561 1 12838 0 NMLFSGTNIAAGK TDPVPDPRAVNQDKKNMLFSGTNIAAGKAM KKNMLFSGTNIAAGKAMGVVVATGVNTEIG K N M G K A 2 0 2 0 0 0 0 2 0 1 1 1 1 1 0 1 1 0 0 0 0 0 13 0 1322.6653 P16615;O14983 P16615 206 218 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 1.5266E-11 234.9 By MS/MS 2.78 1.31 2 2 2 2 1 9 10628000 10628000 0 10332 635 10803;10804 25604;25605;25606;25607;25608;25609;25610;25611;25612 20562;20563;20564;20565;20566;20567;20568 20563 312 7 1962200 0 NMLVQESQQFK SLQRRLEQKFWSQEKNMLVQESQQFKHNFL SQEKNMLVQESQQFKHNFLLLFMKLRWFLK K N M F K H 0 0 1 0 0 3 1 0 0 0 1 1 1 1 0 1 0 0 0 1 0 0 11 0 1350.6602 O94964 O94964 658 668 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 3 0.050486 62.303 By MS/MS 10 0 1 1 43810 0 43810 10333 378 10805 25613 20569 20569 151 0 0 56090 NMMAACDPR ALTVPELTQQMFDAKNMMAACDPRHGRYLT QMFDAKNMMAACDPRHGRYLTVAAVFRGRM K N M P R H 2 1 1 1 1 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 9 0 1064.4202 P04350;P68371;Q3ZCM7;A6NNZ2;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 298 306 TUBB4A;TUBB4B;TUBB8;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2 0.00058739 131.22 By MS/MS By matching 6.78 0.786 4 3 2 8 1 21549000 21512000 37551 10334 1212;509;1412;2331;472;1393;2324 10806;10807;10808 25614;25615;25616;25617;25618;25619;25620;25621;25622 20570;20571;20572;20573;20574 20570 180;181 5 167170 38479 NMQDLVEDFK DSIVGERGRLDSELRNMQDLVEDFKNKYED DSELRNMQDLVEDFKNKYEDEINKRTTAEN R N M F K N 0 0 1 2 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1237.5649 CON__P13647;P13647 CON__P13647 246 255 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.00034031 146.11 By matching By MS/MS 3.2 1.72 1 1 1 1 1 1 4 1512000 1186500 325530 + 10335 52 10809 25623;25624;25625;25626;25627 20575;20576;20577 20577 41 3 111650 244070 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1299.5224 CON__P04264;P04264 P04264 258 267 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.7231E-12 232.72 By MS/MS By MS/MS 4.95 2.9 9 8 7 8 9 6 2 4 8 5 24 42 50837000 30195000 20643000 + 10336 471;45 10810;10811;10812 25628;25629;25630;25631;25632;25633;25634;25635;25636;25637;25638;25639;25640;25641;25642;25643;25644;25645;25646;25647;25648;25649;25650;25651;25652;25653;25654;25655;25656;25657;25658;25659;25660;25661;25662;25663;25664;25665;25666;25667;25668;25669;25670;25671;25672;25673;25674;25675;25676;25677;25678;25679;25680;25681;25682;25683;25684;25685;25686;25687;25688;25689;25690;25691;25692;25693 20578;20579;20580;20581;20582;20583;20584;20585;20586;20587;20588;20589;20590;20591;20592;20593;20594;20595;20596;20597;20598;20599;20600;20601;20602;20603;20604;20605;20606;20607;20608;20609;20610;20611;20612;20613;20614;20615;20616;20617;20618;20619;20620;20621;20622;20623;20624;20625;20626;20627;20628;20629;20630 20628 27;28 53 2901300 9619700 NMQNVEHVPLSLDR SAMLQPLLDNQVGFKNMQNVEHVPLSLDRA KNMQNVEHVPLSLDRAMRLVKDVFISAAER K N M D R A 0 1 2 1 0 1 1 0 1 0 2 0 1 0 1 1 0 0 0 2 0 0 14 0 1650.8148 P20618 P20618 185 198 PSMB1 Proteasome subunit beta type-1 yes yes 2;3 0.00047472 153.49 By MS/MS 8.86 0.639 2 4 1 7 4592600 4592600 0 10337 672 10813;10814 25694;25695;25696;25697;25698;25699;25700 20631;20632;20633;20634 20634 336 4 90019 0 NMRMIQIQENMAEQKNIK QPALTADFVNYYFERNMRMIQIQENMAEQK MIQIQENMAEQKNIKDKLENEQEKLHVEYN R N M I K D 1 1 3 0 0 3 2 0 0 3 0 2 3 0 0 0 0 0 0 0 0 0 18 2 2218.1021 O94880 O94880 627 644 PHF14 PHD finger protein 14 yes yes 3 0.037974 51.591 By MS/MS 7.25 1.92 1 1 1 1 4 440360 0 440360 10338 373 10815 25701;25702;25703;25704 20635;20636;20637 20637 148;149;150 3 0 517610 NMSVHLSPCFR LHYIRKYNRFEKRHKNMSVHLSPCFRDVQI KRHKNMSVHLSPCFRDVQIGDIVTVGECRP K N M F R D 0 1 1 0 1 0 0 0 1 0 1 0 1 1 1 2 0 0 0 1 0 0 11 0 1346.6224 P62280 P62280 108 118 RPS11 40S ribosomal protein S11 yes yes 2;3 0.0001969 143.4 By MS/MS 9 0 2 2 4445300 4445300 0 10339 1152 10816;10817 25705;25706 20638;20639 20639 655 2 87484 0 NMSVIAHVDHGK VDQIRAIMDKKANIRNMSVIAHVDHGKSTL NIRNMSVIAHVDHGKSTLTDSLVCKAGIIA R N M G K S 1 0 1 1 0 0 0 1 2 1 0 1 1 0 0 1 0 0 0 2 0 0 12 0 1306.6452 P13639 P13639 21 32 EEF2 Elongation factor 2 yes yes 2 0.0066473 98.754 By MS/MS 4 0 1 1 449830 449830 0 10340 602 10818 25707 20640 20640 1 42332 0 NMTPSPFLR QIQYKNPWVQIMMFKNMTPSPFLRFYLDSG QIMMFKNMTPSPFLRFYLDSGEQVLVDVET K N M L R F 0 1 1 0 0 0 0 0 0 0 1 0 1 1 2 1 1 0 0 0 0 0 9 0 1061.5328 P82663 P82663 69 77 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2 0.00069119 122.19 By MS/MS 9 0 2 2 1920400 1920400 0 10341 1230 10819;10820 25708;25709 20641;20642 20642 740 2 37794 0 NMVPQQALVIR YYQEAKSSKIMESFKNMVPQQALVIRNGEK ESFKNMVPQQALVIRNGEKMSINAEEVVVG K N M I R N 1 1 1 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 2 0 0 11 0 1267.7071 P05023;P13637;P50993;Q13733 P05023 163 173 ATP1A1;ATP1A3;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 2 2.0093E-05 163.15 By MS/MS 2.5 1.12 2 2 2 2 8 8188200 8188200 0 10342 481 10821;10822 25710;25711;25712;25713;25714;25715;25716;25717 20643;20644;20645;20646;20647;20648 20646 186 5 1443000 0 NNAYLAQSPQLYK ASEGGANVFTVSYFKNNAYLAQSPQLYKQM FKNNAYLAQSPQLYKQMCICADFEKVFSIG K N N Y K Q 2 0 2 0 0 2 0 0 0 0 2 1 0 0 1 1 0 0 2 0 0 0 13 0 1508.7623 P14868 P14868 242 254 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 6.8927E-17 252.14 By MS/MS 4 2.55 1 1 1 1 4 8883600 8883600 0 10343 620 10823 25718;25719;25720;25721 20649;20650;20651 20651 3 183260 0 NNDLCYWVPELVR SWFVRVENMVDQLLRNNDLCYWVPELVREK LRNNDLCYWVPELVREKRFGNWLKDARDWT R N N V R E 0 1 2 1 1 0 1 0 0 0 2 0 0 0 1 0 0 1 1 2 0 0 13 0 1676.7981 P41252 P41252 429 441 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.034886 76.522 By MS/MS 4 0 1 1 57108 57108 0 10344 871 10824 25722 20652 20652 1 5374.2 0 NNEDISIIPPLFTVSVDHR FFDEESYSLLRKAQRNNEDISIIPPLFTVS ISIIPPLFTVSVDHRGTWNGPWVSTEVLAA R N N H R G 0 1 2 2 0 0 1 0 1 3 1 0 0 1 2 2 1 0 0 2 0 0 19 0 2165.1117 P51571 P51571 121 139 SSR4 Translocon-associated protein subunit delta yes yes 3 0.00040544 112.3 By MS/MS 9.5 0.5 1 1 2 228460 228460 0 10345 998 10825 25723;25724 20653;20654;20655;20656;20657 20657 5 8612.9 0 NNEVSLAALK WDVLLDHIQSAALSKNNEVSLAALKSFQEI AALSKNNEVSLAALKSFQEILQIVSPVRDS K N N L K S 2 0 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1057.5768 Q7Z3U7 Q7Z3U7 1158 1167 MON2 Protein MON2 homolog yes yes 2 7.1444E-06 176.33 By MS/MS 2 0 1 1 743340 743340 0 10346 1787 10826 25725 20658 20658 1 251430 0 NNFIPQPIGK VFVILSVEMASSKKKNNFIPQPIGKCKRVF SSKKKNNFIPQPIGKCKRVFQALLPYAVEE K N N G K C 0 0 2 0 0 1 0 1 0 2 0 1 0 1 2 0 0 0 0 0 0 0 10 0 1126.6135 O95071 O95071 1450 1459 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0058986 103.56 By MS/MS 2 0.816 1 1 1 3 1697900 1697900 0 10347 384 10827 25726;25727;25728 20659;20660 20660 2 429100 0 NNFLPNADMETR LKSGGLPLVLSMLTRNNFLPNADMETRRGA LTRNNFLPNADMETRRGAYLNALKIAKLLL R N N T R R 1 1 3 1 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 12 0 1420.6405 Q93008 Q93008 1133 1144 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.00016696 152.64 By MS/MS 2.33 0.471 2 1 3 2473000 2473000 0 10348 2085 10828;10829 25729;25730;25731 20661;20662 20662 1008 2 785400 0 NNGKIELIK HGEAPRISVSFYHVKNNGKIELIKMFDKQQ SFYHVKNNGKIELIKMFDKQQANTIFWSPQ K N N I K M 0 0 2 0 0 0 1 1 0 2 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1027.6026 P55884 P55884 596 604 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.018781 104.2 By MS/MS 5.2 1.17 2 1 1 1 5 7853500 7853500 0 10349 1065 10830 25732;25733;25734;25735;25736 20663;20664 20664 2 559800 0 NNIAMALEVTYR QALVQKRHYLFDVQRNNIAMALEVTYRERL VQRNNIAMALEVTYRERLYRVYKEVKNRLD R N N Y R E 2 1 2 0 0 0 1 0 0 1 1 0 1 0 0 0 1 0 1 1 0 0 12 0 1393.7024 P24539 P24539 172 183 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 1.7134E-08 206.97 By MS/MS 9 0 1 1 164570 164570 0 10350 714 10831 25737 20665 20665 352 1 3238.7 0 NNIDVCPECGHLK NRCRRRNPQKLIKVKNNIDVCPECGHLKQK VKNNIDVCPECGHLKQKHVLCAYCYEKVCK K N N L K Q 0 0 2 1 2 0 1 1 1 1 1 1 0 0 1 0 0 0 0 1 0 0 13 0 1554.6919 Q9BYC8 Q9BYC8 105 117 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 2;3 1.2074E-05 211.37 By MS/MS 10 0 2 2 1172400 1172400 0 10351 2366 10832 25738;25739 20666;20667 20666 2 63189 0 NNIPYFETSAK RQVATKRAQAWCYSKNNIPYFETSAKEAIN CYSKNNIPYFETSAKEAINVEQAFQTIARN K N N A K E 1 0 2 0 0 0 1 0 0 1 0 1 0 1 1 1 1 0 1 0 0 0 11 0 1282.6194 P51149 P51149 147 157 RAB7A Ras-related protein Rab-7a yes yes 2 0.00055732 130.41 By MS/MS 9.5 0.5 1 1 2 2374100 2374100 0 10352 990 10833 25740;25741 20668 20668 1 51813 0 NNKEYLEFR SGGYPALMDCMNKLKNNKEYLEFRRERSQM CMNKLKNNKEYLEFRRERSQMLLSRRNQLL K N N F R R 0 1 2 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 9 1 1211.5935 Q9BPW8 Q9BPW8 144 152 NIPSNAP1 Protein NipSnap homolog 1 yes yes 3 0.0087776 125.97 By MS/MS 8 0 1 1 1280000 1280000 0 10353 2278 10834 25742 20669 20669 1 16160 0 NNLAGAEELFAR NVLQNPDLALRMAVRNNLAGAEELFARKFN AVRNNLAGAEELFARKFNALFAQGNYSEAA R N N A R K 3 1 2 0 0 0 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1303.6521 Q00610 Q00610 355 366 CLTC Clathrin heavy chain 1 yes yes 2 1.0176E-17 248.88 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 6 1 3878500 3795100 83343 10354 1262 10835 25743;25744;25745;25746;25747;25748;25749 20670;20671;20672;20673;20674;20675 20674 6 447440 10608 NNLASCYLK ATRLGPDDPNVAKTKNNLASCYLKQGKYQD NVAKTKNNLASCYLKQGKYQDAETLYKEIL K N N L K Q 1 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1081.5226 Q07866;Q9H0B6;Q9NSK0 Q9H0B6 370 378 KLC1;KLC2;KLC4 Kinesin light chain 1;Kinesin light chain 2;Kinesin light chain 4 no no 2 0.010375 114.89 By MS/MS 5 0 1 1 894730 894730 0 10355 2405;2572;1303 10836 25750 20676 20676 1 8973.6 0 NNLEALEDFEK GKPVRGVKLVGRDPKNNLEALEDFEKAAGA RDPKNNLEALEDFEKAAGARGLSTESILIP K N N E K A 1 0 2 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 11 0 1320.6198 P31025 P31025 140 150 LCN1 Lipocalin-1 yes yes 2 1.7086E-06 181.87 By MS/MS By MS/MS 5.62 3.94 2 1 1 2 2 3 5 1572800 901520 671240 10356 782 10837 25751;25752;25753;25754;25755;25756;25757;25758 20677;20678;20679;20680;20681;20682;20683;20684 20684 8 33750 679170 NNLIMMLQR VQQAQREQDHFVKEKNNLIMMLQREKENLC HFVKEKNNLIMMLQREKENLCNLEKKYSSL K N N Q R E 0 1 2 0 0 1 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 9 0 1131.5893 Q86SQ0 Q86SQ0 791 799 PHLDB2 Pleckstrin homology-like domain family B member 2 yes yes 2 0.018292 75.213 By MS/MS 1 0 1 1 0 0 0 10357 1810 10838 25759 20685 20685 945;946 1 0 0 NNNQQLAQLQK AVKFIVRKFPAVETRNNNQQLAQLQKEKSE VETRNNNQQLAQLQKEKSEILKNLALYYFT R N N Q K E 1 0 3 0 0 4 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1297.6739 Q9Y2A7 Q9Y2A7 71 81 NCKAP1 Nck-associated protein 1 yes yes 2 2.2226E-18 276.02 By MS/MS 4 0 1 1 907820 907820 0 10358 2824 10839 25760 20686 20686 1 85432 0 NNPEPWNK LLRLALFNPDVCWDRNNPEPWNKLGPNDQY PDVCWDRNNPEPWNKLGPNDQYKFYSVNVD R N N N K L 0 0 3 0 0 0 1 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 8 0 997.46174 O00483 O00483 48 55 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.018237 101.6 By MS/MS By matching 10 0 2 1 1 4761300 4711000 50325 10359 109 10840 25761;25762 20687 20687 1 253910 64430 NNPVHLITEEDLK LFRELMHQKAEKEMKNNPVHLITEEDLKQI MKNNPVHLITEEDLKQISTLESVSTSKKDK K N N L K Q 0 0 2 1 0 0 2 0 1 1 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1520.7835 O94874 O94874 390 402 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00039042 142.97 By MS/MS 4 0 1 1 6080600 6080600 0 10360 372 10841 25763 20688 20688 1 572230 0 NNQGTVNWSVDDIVK SSFPDDATSPLQENRNNQGTVNWSVDDIVK NNQGTVNWSVDDIVKGINSSNVENQLQATQ R N N V K G 0 0 3 2 0 1 0 1 0 1 0 1 0 0 0 1 1 1 0 3 0 0 15 0 1687.8166 P52292 P52292 69 83 KPNA2 Importin subunit alpha-1 yes yes 2 2.1821E-11 258.23 By MS/MS 6 0 1 1 4429900 4429900 0 10361 1013 10842 25764 20689 20689 1 30452 0 NNQNPWTFER GTLEKMRKDQEERERNNQNPWTFERIATAN EERERNNQNPWTFERIATANMLGIRKVLSP R N N E R I 0 1 3 0 0 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 10 0 1304.5898 Q9NX20 Q9NX20 208 217 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 0.00052125 132.88 By MS/MS 8 0 1 1 1800300 1800300 0 10362 2617 10843 25765 20690 20690 1 22729 0 NNQTMKHDAKMR NKDQELIENESYRTKNNQTMKHDAKMRYLS RTKNNQTMKHDAKMRYLSDDVDDISLSSLS K N N M R Y 1 1 2 1 0 1 0 0 1 0 0 2 2 0 0 0 1 0 0 0 0 0 12 2 1472.6977 Q9H7U1 Q9H7U1 377 388 CCSER2 Serine-rich coiled-coil domain-containing protein 2 yes yes 3 0.018349 72.34 By MS/MS 6.75 0.829 2 1 1 4 28177000 28177000 0 10363 2465 10844 25766;25767;25768;25769 20691;20692;20693 20691 1099;1100 3 213260 0 NNRPSEGPLQTR NLIQQCTAFLLDALKNNRPSEGPLQTRLLE ALKNNRPSEGPLQTRLLEMNLMHAPQVADA K N N T R L 0 2 2 0 0 1 1 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 1 1367.6906 Q00610 Q00610 572 583 CLTC Clathrin heavy chain 1 yes yes 3 0.0043304 98.182 By MS/MS 2 0.816 1 1 1 3 848470 848470 0 10364 1262 10845 25770;25771;25772 20694 20694 1 103390 0 NNSELLNNLGNFINR EGQDSAFSWTDLLLKNNSELLNNLGNFINR NNSELLNNLGNFINRAGMFVSKFFGGYVPE K N N N R A 0 1 6 0 0 0 1 1 0 1 3 0 0 1 0 1 0 0 0 0 0 0 15 0 1730.87 P56192 P56192 642 656 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.00060479 185.25 By MS/MS 4 0 1 1 130590 130590 0 10365 1067 10846 25773 20695;20696 20695 2 12289 0 NNSFVNEIISR ITIKLKQLKAEVIAKNNSFVNEIISRIKVT VIAKNNSFVNEIISRIKVTT__________ K N N S R I 0 1 3 0 0 0 1 0 0 2 0 0 0 1 0 2 0 0 0 1 0 0 11 0 1291.6521 P43246 P43246 919 929 MSH2 DNA mismatch repair protein Msh2 yes yes 2 1.0492E-24 238.51 By MS/MS 4 0 1 1 0 0 0 10366 894 10847 25774 20697 20697 1 0 0 NNSGEEFDCAFR EKMKVINTGIKVWCRNNSGEEFDCAFRLAQ WCRNNSGEEFDCAFRLAQEGIYTLYPFINS R N N F R L 1 1 2 1 1 0 2 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 12 0 1444.5677 Q08J23 Q08J23 591 602 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.0012226 121.02 By MS/MS 4 0 1 1 1269200 1269200 0 10367 1317 10848 25775 20698 20698 1 119440 0 NNTALQSVSLR CTKVKQKQQKAALLKNNTALQSVSLRSKTT ALLKNNTALQSVSLRSKTTIRERPSSAIYP K N N L R S 1 1 2 0 0 1 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 11 0 1201.6415 Q92974 Q92974 101 111 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.00024361 139.31 By MS/MS 3 0 1 1 492970 492970 0 10368 2083 10849 25776 20699 20699 1 9020 0 NNTQVLINCR EFNTGPLSVLTQSVKNNTQVLINCRNNKKL TQSVKNNTQVLINCRNNKKLLGRVKAFDRH K N N C R N 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1230.6139 P62316 P62316 38 47 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 7.1526E-08 209.6 By MS/MS By MS/MS 10 0 2 1 1 3117300 3066200 51171 10369 1156 10850 25777;25778 20700;20701 20701 2 165250 65513 NNTVGLIQLNRPK SGANFEYIIAEKRGKNNTVGLIQLNRPKAL GKNNTVGLIQLNRPKALNALCDGLIDELNQ K N N P K A 0 1 3 0 0 1 0 1 0 1 2 1 0 0 1 0 1 0 0 1 0 0 13 1 1465.8365 P30084 P30084 44 56 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 2 1.0746E-10 229.82 By MS/MS 8 0 1 1 1580300 1580300 0 10370 767 10851 25779 20702 20702 1 19952 0 NNTVTPGGKPNK EFYLGKRCAYVYKAKNNTVTPGGKPNKTRV KAKNNTVTPGGKPNKTRVIWGKVTRAHGNS K N N N K T 0 0 3 0 0 0 0 2 0 0 0 2 0 0 2 0 2 0 0 1 0 0 12 1 1225.6415 P18077 P18077 55 66 RPL35A 60S ribosomal protein L35a yes yes 2 9.0881E-12 231.38 By MS/MS 10 0 1 1 824210 824210 0 10371 650 10852 25780 20703 20703 1 44422 0 NNVNVASLTQSEIR EVQLKDLILADYGKKNNVNVASLTQSEIRD KNNVNVASLTQSEIRDIILGMEISAPSQQR K N N I R D 1 1 3 0 0 1 1 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1543.7954 Q6P2Q9 Q6P2Q9 1995 2008 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 2.8778E-07 211.38 By MS/MS 2 0 1 1 514960 514960 0 10372 1708 10853 25781 20704 20704 1 174180 0 NNVVINYK RLIVDHNIADYMTAKNNVVINYKDMNHTNS ADYMTAKNNVVINYKDMNHTNSYGIIRGLQ K N N Y K D 0 0 3 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 2 0 0 8 0 962.51853 Q6P2Q9 Q6P2Q9 1013 1020 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00043497 158.36 By MS/MS 1.5 0.5 1 1 2 1035300 1035300 0 10373 1708 10854 25782;25783 20705 20705 1 337280 0 NNWEVSALSR LDGYLKTSALSDETKNNWEVSALSRAAQKG SDETKNNWEVSALSRAAQKGFNKVVLKHLK K N N S R A 1 1 2 0 0 0 1 0 0 0 1 0 0 0 0 2 0 1 0 1 0 0 10 0 1174.5731 P78527 P78527 811 820 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00015719 150.04 By MS/MS 2 0.816 1 1 1 3 674970 674970 0 10374 1225 10855 25784;25785;25786 20706;20707 20707 2 174680 0 NNYDEEIISLK AKRRWEYENELSKVRNNYDEEIISLKNQFE SKVRNNYDEEIISLKNQFETEINITKTTIH R N N L K N 0 0 2 1 0 0 2 0 0 2 1 1 0 0 0 1 0 0 1 0 0 0 11 0 1336.6511 P15924 P15924 1353 1363 DSP Desmoplakin yes yes 2 0.022819 84.17 By MS/MS 1.5 0.5 1 1 2 219560 219560 0 10375 628 10856 25787;25788 20708 20708 1 68385 0 NPAAYENDK IYTWGTEEFERSKRKNPAAYENDK______ ERSKRKNPAAYENDK_______________ K N P D K - 2 0 2 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 9 0 1020.4512 O14949 O14949 74 82 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 2 0.00021091 155.58 By MS/MS 10 0 1 1 832510 832510 0 10376 147 10857 25789 20709 20709 1 44869 0 NPADLPK KFSVSPVVRVAVEAKNPADLPKLVEGLKRL VRVAVEAKNPADLPKLVEGLKRLAKSDPMV K N P P K L 1 0 1 1 0 0 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 7 0 753.4021 P13639 P13639 513 519 EEF2 Elongation factor 2 yes yes 2 0.016203 119.29 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 17195000 17166000 28900 10377 602 10858 25790;25791;25792;25793;25794 20710;20711 20710 2 1206100 61575 NPALYASNVR IEFLPVYSPSEEEKRNPALYASNVRRVMAE EEEKRNPALYASNVRRVMAEALGVSVTDYT R N P V R R 2 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1103.5724 Q8NF37 Q8NF37 286 295 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.0003892 135.43 By MS/MS 6 0 1 1 2595000 2595000 0 10378 1963 10859 25795 20712 20712 1 17839 0 NPASPYNLAYK LIRKTRTILEAKQAKNPASPYNLAYKYNFE KQAKNPASPYNLAYKYNFEYSVVFNMVLWI K N P Y K Y 2 0 2 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 2 0 0 0 11 0 1236.6139 O75787 O75787 288 298 ATP6AP2 Renin receptor yes yes 2 0.0051401 103.55 By MS/MS 8.5 1.5 1 1 2 839550 839550 0 10379 345 10860 25796;25797 20713;20714 20714 2 28028 0 NPATTNQTEFER RKGSQITQQSTNQSRNPATTNQTEFERVF_ QSRNPATTNQTEFERVF_____________ R N P E R V 1 1 2 0 0 1 2 0 0 0 0 0 0 1 1 0 3 0 0 0 0 0 12 0 1406.6426 P50750 P50750 359 370 CDK9 Cyclin-dependent kinase 9 yes yes 2 1.4571E-12 234.9 By MS/MS 7 0 1 1 435850 435850 0 10380 980 10861 25798 20715 20715 1 6842.1 0 NPAVLSAASFDGR PTNTQWCFDIQWCPRNPAVLSAASFDGRIS PRNPAVLSAASFDGRISVYSIMGGSTDGLR R N P G R I 3 1 1 1 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 13 0 1303.6521 O94979 O94979 315 327 SEC31A Protein transport protein Sec31A yes yes 2 0.00054233 134.38 By MS/MS 3.5 0.5 1 1 2 700750 700750 0 10381 382 10862 25799;25800 20716;20717 20717 1 53218 0 NPAVQFLYQK IVQAKPLEIAKLVQKNPAVQFLYQKLIGWL KLVQKNPAVQFLYQKLIGWLNEDQRKDFGF K N P Q K L 1 0 1 0 0 2 0 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 10 0 1206.6397 O94822 O94822 656 665 LTN1 E3 ubiquitin-protein ligase listerin yes yes 2 9.1839E-08 193.28 By MS/MS 2 0 1 1 225290 225290 0 10382 368 10863 25801 20718 20718 1 76204 0 NPDDITNEEYGEFYK IDQEELNKTKPIWTRNPDDITNEEYGEFYK NPDDITNEEYGEFYKSLTNDWEDHLAVKHF R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 1.9131E-70 378.42 By MS/MS By matching 3.71 1.58 1 1 3 1 1 6 1 46095000 46033000 61615 10383 513 10864 25802;25803;25804;25805;25806;25807;25808 20719;20720;20721;20722;20723 20721 5 3760700 131280 NPDDITQEEYGEFYK IDQEELNKTKPIWTRNPDDITQEEYGEFYK NPDDITQEEYGEFYKSLTNDWEDHLAVKHF R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.9131E-70 378.42 By MS/MS By MS/MS 4.1 1.7 1 1 1 3 2 1 1 9 1 89427000 89341000 85594 10384 521 10865 25809;25810;25811;25812;25813;25814;25815;25816;25817;25818 20724;20725;20726;20727;20728;20729;20730 20728 7 7416800 182370 NPELPNAAQAQK EILFYRKTIGYKVPRNPELPNAAQAQKEEQ VPRNPELPNAAQAQKEEQLKIDEAESLNDE R N P Q K E 3 0 2 0 0 2 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 12 0 1279.6521 O60264 O60264 803 814 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.0063686 99.568 By MS/MS 3 0 1 1 218650 218650 0 10385 251 10866 25819 20731 20731 1 4000.7 0 NPELQNLLLDDFFK IRSVFLGKIKDAFDRNPELQNLLLDDFFKS RNPELQNLLLDDFFKSAVENCQDSWRRAVS R N P F K S 0 0 2 2 0 1 1 0 0 0 4 1 0 2 1 0 0 0 0 0 0 0 14 0 1704.8723 P52209 P52209 383 396 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.009416 96.23 By MS/MS 6 0 1 1 24551 24551 0 10386 1011 10867 25820 20732 20732 0 168.77 0 NPEPELLVR VGLSFCGADVGGFFKNPEPELLVRWYQMGA VGGFFKNPEPELLVRWYQMGAYQPFFRAHA K N P V R W 0 1 1 0 0 0 2 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 9 0 1065.5819 Q14697 Q14697 654 662 GANAB Neutral alpha-glucosidase AB yes yes 2 0.00066887 141.52 By MS/MS 4.5 0.5 1 1 2 5651100 5651100 0 10387 1454 10868 25821;25822 20733 20733 1 469360 0 NPEQVDLYQFMAK SITANYTDQWERWWKNPEQVDLYQFMAKDN WKNPEQVDLYQFMAKDNVPFHSLVFPCSAL K N P A K D 1 0 1 1 0 2 1 0 0 0 1 1 1 1 1 0 0 0 1 1 0 0 13 0 1581.7497 P56192 P56192 542 554 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 1.2622E-07 209.8 By MS/MS 4 0 2 2 2399400 2399400 0 10388 1067 10869;10870 25823;25824 20734;20735 20735 599 2 225800 0 NPEVGLKPVWYSPK PEAQEEMKEVAKHPKNPEVGLKPVWYSPKV KNPEVGLKPVWYSPKVFIEGADAETFSEGE K N P P K V 0 0 1 0 0 0 1 1 0 0 1 2 0 0 3 1 0 1 1 2 0 0 14 1 1612.8613 P07814 P07814 536 549 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.001778 110.15 By MS/MS 4 0.816 1 1 1 3 1019800 1019800 0 10389 512 10871 25825;25826;25827 20736 20736 1 40824 0 NPFDTFFGQR HGDPHAMFAEFFGGRNPFDTFFGQRNGEEG FFGGRNPFDTFFGQRNGEEGMDIDDPFSGF R N P Q R N 0 1 1 1 0 1 0 1 0 0 0 0 0 3 1 0 1 0 0 0 0 0 10 0 1227.5673 P25685 P25685 110 119 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.00026107 142.98 By MS/MS 7 0 1 1 262450 262450 0 10390 722 10872 25828 20737 20737 1 4120 0 NPFGNAGLLLGEAGK MDKGKELSGLGSALKNPFGNAGLLLGEAGK NPFGNAGLLLGEAGKQLRRRAGLGSGLSLS K N P G K Q 2 0 2 0 0 0 1 4 0 0 3 1 0 1 1 0 0 0 0 0 0 0 15 0 1456.7674 P49748 P49748 493 507 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0010445 122.52 By MS/MS 5 0 1 1 177300 177300 0 10391 959 10873 25829 20738 20738 1 1778.3 0 NPFLAAVTTNR RLKSYENQKPPFDAKNPFLAAVTTNRKLNQ FDAKNPFLAAVTTNRKLNQGTERHLMHLEL K N P N R K 2 1 2 0 0 0 0 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 11 0 1202.6408 P16435 P16435 280 290 POR NADPH--cytochrome P450 reductase yes yes 2 1.3498E-05 169.93 By MS/MS 5 0 1 1 1233700 1233700 0 10392 634 10874 25830 20739 20739 1 12373 0 NPGLWLESVR RARAILEKSRLKNPKNPGLWLESVRLEYRA LKNPKNPGLWLESVRLEYRAGLKNIANTLM K N P V R L 0 1 1 0 0 0 1 1 0 0 2 0 0 0 1 1 0 1 0 1 0 0 10 0 1169.6193 O94906 O94906 776 785 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 4.5085E-05 157.66 By MS/MS 4.5 0.5 1 1 2 514300 514300 0 10393 376 10875 25831;25832 20740 20740 1 41227 0 NPKPATVFSHK HIVLMLADDMACNPRNPKPATVFSHKNMEL CNPRNPKPATVFSHKNMELNVYGDDVEVDY R N P H K N 1 0 1 0 0 0 0 0 1 0 0 2 0 1 2 1 1 0 0 1 0 0 11 1 1224.6615 Q92643 Q92643 96 106 PIGK GPI-anchor transamidase yes yes 3 0.0036083 101.35 By MS/MS 7 0 1 1 1057500 1057500 0 10394 2066 10876 25833 20741 20741 1 16601 0 NPKTDKLVNER AYEQAESDIMKRQPRNPKTDKLVNERLISM RQPRNPKTDKLVNERLISMAYGQIGMIQAL R N P E R L 0 1 2 1 0 0 1 0 0 0 1 2 0 0 1 0 1 0 0 1 0 0 11 2 1312.7099 P05023 P05023 838 848 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 0.030089 105.46 By MS/MS 2.8 1.17 1 1 1 2 5 2024000 2024000 0 10395 481 10877 25834;25835;25836;25837;25838 20742;20743 20742 2 255060 0 NPLEQAFR HWGEVEYHVISTFKRNPLEQAFRRPNVNLT VISTFKRNPLEQAFRRPNVNLTSNHLLYHY R N P F R R 1 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 8 0 973.49813 Q8WVX9 Q8WVX9 329 336 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.049281 82.75 By MS/MS 6 0 1 1 2042100 2042100 0 10396 2031 10878 25839 20744 20744 1 14038 0 NPLIAGK SKMFLRGDSVIVVLRNPLIAGK________ DSVIVVLRNPLIAGK_______________ R N P G K - 1 0 1 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 7 0 711.42792 P62316 P62316 112 118 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.03963 97.473 By MS/MS 10 0 1 1 534810 534810 0 10397 1156 10879 25840 20745 20745 1 28824 0 NPLVAVYYTNR KYPEAAACYGRAITRNPLVAVYYTNRALCY AITRNPLVAVYYTNRALCYLKMQQHEQALA R N P N R A 1 1 2 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 2 2 0 0 11 0 1308.6826 Q9UNE7 Q9UNE7 56 66 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 2.7856E-06 188.91 By MS/MS 7.5 0.5 1 1 2 1014100 1014100 0 10398 2786 10880 25841;25842 20746 20746 1 13309 0 NPNLLFTLK AIETTQQLYPSLLERNPNLLFTLKVRQFIE PSLLERNPNLLFTLKVRQFIEMVNGTDSEV R N P L K V 0 0 2 0 0 0 0 0 0 0 3 1 0 1 1 0 1 0 0 0 0 0 9 0 1058.6124 Q96S59 Q96S59 437 445 RANBP9 Ran-binding protein 9 yes yes 2 0.0030149 106.68 By MS/MS 4.5 0.5 1 1 2 1242200 1242200 0 10399 2232 10881 25843;25844 20747;20748 20747 2 100390 0 NPPAFTELQLPR GAVLQIGDVKYKVERNPPAFTELQLPRYIM VERNPPAFTELQLPRYIMAGFPVCPKLSLE R N P P R Y 1 1 1 0 0 1 1 0 0 0 2 0 0 1 3 0 1 0 0 0 0 0 12 0 1381.7354 Q6L8Q7 Q6L8Q7 160 171 PDE12 2,5-phosphodiesterase 12 yes yes 2 4.1877E-05 169.99 By MS/MS 5.5 0.5 1 1 2 4738600 4738600 0 10400 1686 10882 25845;25846 20749;20750 20749 2 47526 0 NPPGFAFVEFEDPR AFGYYGPLRSVWVARNPPGFAFVEFEDPRD RNPPGFAFVEFEDPRDAADAVRELDGRTLC R N P P R D 1 1 1 1 0 0 2 1 0 0 0 0 0 3 3 0 0 0 0 1 0 0 14 0 1620.7573 P84103;Q16629 P84103 44 57 SRSF3;SRSF7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 yes no 2 0.00089879 138.42 By MS/MS 8.5 0.5 1 1 2 512360 512360 0 10401 1248 10883 25847;25848 20751;20752;20753;20754 20751 4 8928.4 0 NPPLAEALLSGDLEK MLLANPHELSLLKERNPPLAEALLSGDLEK NPPLAEALLSGDLEKFSRVLVEQQQDRARR R N P E K F 2 0 1 1 0 0 2 1 0 0 4 1 0 0 2 1 0 0 0 0 0 0 15 0 1565.8301 Q5TDH0 Q5TDH0 156 170 DDI2 Protein DDI1 homolog 2 yes yes 2 5.6409E-17 265.77 By MS/MS 6.5 0.5 1 1 2 1759300 1759300 0 10402 1641 10884 25849;25850 20755;20756;20757 20756 3 12453 0 NPPSSDELDGIIK RLFDPINLVFPPGGRNPPSSDELDGIIKTI GRNPPSSDELDGIIKTIASELNVAAVDTNL R N P I K T 0 0 1 2 0 0 1 1 0 2 1 1 0 0 2 2 0 0 0 0 0 0 13 0 1383.6882 Q9UP83 Q9UP83 507 519 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.00079778 122.33 By MS/MS 4 0 1 1 1194300 1194300 0 10403 2797 10885 25851 20758 20758 1 112390 0 NPQAYLNYK KTSHSVGRRARYIVKNPQAYLNYKVCLAEV ARYIVKNPQAYLNYKVCLAEVYQDKALVGD K N P Y K V 1 0 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 9 0 1109.5506 Q12789 Q12789 1326 1334 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 7.5488E-05 166.78 By MS/MS 2 0 1 1 464560 464560 0 10404 1328 10886 25852 20759 20759 1 157130 0 NPQNSSQSADGLR KPTFSQTIALLNIYRNPQNSSQSADGLRCA YRNPQNSSQSADGLRCAVSDVEMQEHYDEF R N P L R C 1 1 2 1 0 2 0 1 0 0 1 0 0 0 1 3 0 0 0 0 0 0 13 0 1372.6331 P0DN76;Q01081 P0DN76 54 66 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 2 0.00026957 155.47 By MS/MS 7.5 0.5 1 1 2 2353300 2353300 0 10405 551 10887 25853;25854 20760 20760 1 34310 0 NPQSTEPVLGGGEPPFHGHR SCISILVCTGVYNPRNPQSTEPVLGGGEPP EPVLGGGEPPFHGHRDLCFSPGLMEASHVV R N P H R D 0 1 1 0 0 1 2 4 2 0 1 0 0 1 4 1 1 0 0 1 0 0 20 0 2112.0137 Q9BXW7 Q9BXW7 370 389 CECR5 Cat eye syndrome critical region protein 5 yes yes 3;4 0.00056999 105.5 By MS/MS 7 0 2 2 4621300 4621300 0 10406 2361 10888 25855;25856 20761;20762 20761 2 72546 0 NPQSYLYLVK EGGEEETLRRLGLERNPQSYLYLVKGQCAK LGLERNPQSYLYLVKGQCAKVSSINDKSDW R N P V K G 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 1 0 0 2 1 0 0 10 0 1223.655 O00159 O00159 260 269 MYO1C Unconventional myosin-Ic yes yes 2 1.89E-06 157.99 By MS/MS 4.5 0.5 1 1 2 3438300 3438300 0 10407 85 10889 25857;25858 20763 20763 0 311620 0 NPSAAFFCVAR FAYGSNLLTERIHLRNPSAAFFCVARLQDF IHLRNPSAAFFCVARLQDFKLDFGNSQGKT R N P A R L 3 1 1 0 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 11 0 1238.5866 O75223 O75223 35 45 GGCT Gamma-glutamylcyclotransferase yes yes 2 0.003231 125.74 By MS/MS By MS/MS 6 3 1 1 1 1 370880 238990 131890 10408 306 10890 25859;25860 20764;20765 20764 2 4703.4 16788 NPSSAAPVQSR VVQPPEEAMSGQQSRNPSSAAPVQSRGGIG QQSRNPSSAAPVQSRGGIGASENLENPPKM R N P S R G 2 1 1 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 11 0 1112.5574 O15027 O15027 772 782 SEC16A Protein transport protein Sec16A yes yes 2 0.0092789 92.611 By MS/MS 1 0 1 1 135300 135300 0 10409 155 10891 25861 20766 20766 1 32603 0 NPSVIDKQDKD ENDAKKIEALLNLPRNPSVIDKQDKD____ NLPRNPSVIDKQDKD_______________ R N P K D - 0 0 1 3 0 1 0 0 0 1 0 2 0 0 1 1 0 0 0 1 0 0 11 2 1257.6201 Q9NPL8 Q9NPL8 275 285 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2;3 0.0018622 139.15 By MS/MS 8.5 1.12 2 2 2 2 8 7274000 7274000 0 10410 2534 10892 25862;25863;25864;25865;25866;25867;25868;25869 20767;20768 20767 2 124210 0 NPTIVNFPITNVDLR FCIKRFTKNNFFVEKNPTIVNFPITNVDLR NPTIVNFPITNVDLREYLSEEVQAVHKNTT K N P L R E 0 1 3 1 0 0 0 0 0 2 1 0 0 1 2 0 2 0 0 2 0 0 15 0 1711.9257 Q53GS9 Q53GS9 467 481 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 2 4.8762E-05 193 By MS/MS 5.5 0.5 1 1 2 610140 610140 0 10411 1588 10893 25870;25871 20769;20770 20769 2 4907.6 0 NPVCANR DVEQQFKYTQPNICRNPVCANRRRFLLDTN YTQPNICRNPVCANRRRFLLDTNKSRFVDF R N P N R R 1 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 7 0 829.38647 Q14566 Q14566 182 188 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.010499 134.12 By MS/MS 4 0 1 1 727210 727210 0 10412 1444 10894 25872 20771 20771 1 68435 0 NPYLSVK PIRHFMELVTCGLSKNPYLSVKQKVEHIEW LVTCGLSKNPYLSVKQKVEHIEWFRNYFNE K N P V K Q 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 7 0 819.44905 Q92665 Q92665 361 367 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.013694 125.81 By MS/MS 7.5 0.5 1 1 2 3177500 3177500 0 10413 2067 10895 25873;25874 20772 20772 1 47512 0 NPYTIFHQALK KYHAASAEEQATIERNPYTIFHQALKNCEP TIERNPYTIFHQALKNCEPMIGLVPILKGG R N P L K N 1 0 1 0 0 1 0 0 1 1 1 1 0 1 1 0 1 0 1 0 0 0 11 0 1330.7034 Q9Y2R9 Q9Y2R9 140 150 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.00088939 123.79 By MS/MS 8 0 1 1 1885900 1885900 0 10414 2841 10896 25875 20773 20773 1 23810 0 NQALFPACVLK GKDLGLAFEIPPHMKNQALFPACVLKNAEL PHMKNQALFPACVLKNAELKFNFGEEEFKF K N Q L K N 2 0 1 0 1 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 11 0 1259.6696 Q92499 Q92499 224 234 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.0080941 95.741 By MS/MS 4.5 0.5 1 1 2 456720 456720 0 10415 2046 10897 25876;25877 20774 20774 1 24972 0 NQALKEAGVFVPR AGACANQASETAVAKNQALKEAGVFVPRSF AKNQALKEAGVFVPRSFDELGEIIQSVYED K N Q P R S 2 1 1 0 0 1 1 1 0 0 1 1 0 1 1 0 0 0 0 2 0 0 13 1 1427.7885 P53396 P53396 776 788 ACLY ATP-citrate synthase yes yes 2;3 0.00051757 173.04 By MS/MS 3.17 1.34 1 1 1 2 1 6 10711000 10711000 0 10416 1030 10898 25878;25879;25880;25881;25882;25883 20775;20776 20776 2 1008200 0 NQALNIAWQK KSKILTTIEDLDQKKNQALNIAWQKVNKDF LDQKKNQALNIAWQKVNKDFGSIFSTLLPG K N Q Q K V 2 0 2 0 0 2 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1184.6302 O95347 O95347 1027 1036 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.010798 110.12 By MS/MS 3 0 1 1 136640 136640 0 10417 405 10899 25884 20777 20777 0 2500.2 0 NQCEGIKK ILENVIKTRWKILPRNQCEGIKKYVVGLII RWKILPRNQCEGIKKYVVGLIIKTSSDPTC R N Q K K Y 0 0 1 0 1 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 1 975.48076 O14980 O14980 97 104 XPO1 Exportin-1 yes yes 2 0.016871 125.81 By MS/MS 4 0 1 1 680770 680770 0 10418 153 10900 25885 20778 20778 1 64065 0 NQCTQVVQER QKQALEASNRIQESKNQCTQVVQERESLLV IQESKNQCTQVVQERESLLVKIKVLEQDKA K N Q E R E 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 10 0 1260.5881 P15924 P15924 1803 1812 DSP Desmoplakin yes yes 2 1.0844E-07 191.45 By MS/MS By MS/MS 3.14 2.9 2 2 2 1 3 4 3693400 2812600 880830 10419 628 10901 25886;25887;25888;25889;25890;25891;25892 20779;20780;20781;20782 20780 4 699060 500790 NQDATVYVGGLDEK ______________________________ RNQDATVYVGGLDEKVSEPLLWELFLQAGP R N Q E K V 1 0 1 2 0 1 1 2 0 0 1 1 0 0 0 0 1 0 1 2 0 0 14 0 1507.7155 Q15427 Q15427 10 23 SF3B4 Splicing factor 3B subunit 4 yes yes 2 0.0045704 105.19 By MS/MS 10 0 1 1 246720 246720 0 10420 1511 10902 25893 20783 20783 1 13297 0 NQDDFECVTTLEGHENEVK LASASFDATTCIWKKNQDDFECVTTLEGHE FECVTTLEGHENEVKSVAWAPSGNLLATCS K N Q V K S 0 0 2 2 1 1 4 1 1 0 1 1 0 1 0 0 2 0 0 2 0 0 19 0 2262.9699 O76071 O76071 91 109 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 3 0.0024396 94.973 By MS/MS 7.5 0.5 1 1 2 3196000 3196000 0 10421 361 10903 25894;25895 20784 20784 1 47391 0 NQDFMNVYYQIR QDVIRISRWLVEYGRNQDFMNVYYQIRSSQ YGRNQDFMNVYYQIRSSQLDRSIKGLKEHF R N Q I R S 0 1 2 1 0 2 0 0 0 1 0 0 1 1 0 0 0 0 2 1 0 0 12 0 1589.7297 Q9UPT5 Q9UPT5 212 223 EXOC7 Exocyst complex component 7 yes yes 2 1.412E-05 178.54 By MS/MS 5 0 1 1 656910 656910 0 10422 2801 10904 25896 20785 20785 1170 1 6588.5 0 NQDLAPNSAEQASILSLVTK PAPDETSFSEALLKRNQDLAPNSAEQASIL PNSAEQASILSLVTKINNVIDNLIVAPGTF R N Q T K I 3 0 2 1 0 2 1 0 0 1 3 1 0 0 1 3 1 0 0 1 0 0 20 0 2098.0906 Q12905 Q12905 61 80 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 3.9539E-13 244.54 By MS/MS 7 0 1 1 444270 444270 0 10423 1338 10905 25897 20786 20786 1 6974.3 0 NQEADQHSAR HRSLRTAALSLKLLKNQEADQHSARLFIQS LKLLKNQEADQHSARLFIQSLEGLLPRLLS K N Q A R L 2 1 1 1 0 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 10 0 1154.5065 Q5TH69 Q5TH69 665 674 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 0.046872 73.841 By MS/MS 2 0 1 1 34690 34690 0 10424 1642 10906 25898 20787 20787 1 11734 0 NQEDIILFR SLYPHMYARAYINFKNQEDIILFRDRFDGY AYINFKNQEDIILFRDRFDGYVFLDNKGQE K N Q F R D 0 1 1 1 0 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1146.6033 Q9BZI7 Q9BZI7 103 111 UPF3B Regulator of nonsense transcripts 3B yes yes 2 1.9522E-05 155.58 By MS/MS 5.5 0.5 1 1 2 1335600 1335600 0 10425 2380 10907 25899;25900 20788;20789 20788 2 9181.5 0 NQEDTFAAELHR ENQNVNLTRKGSILKNQEDTFAAELHRLKQ ILKNQEDTFAAELHRLKQQPLFSLVDFEQV K N Q H R L 2 1 1 1 0 1 2 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 12 0 1429.6586 Q9UGJ1 Q9UGJ1 302 313 TUBGCP4 Gamma-tubulin complex component 4 yes yes 3 0.038074 72.2 By MS/MS 5 0 1 1 2487300 2487300 0 10426 2721 10908 25901 20790 20790 1 24946 0 NQEIPHK SPDIKTLDQIRTIERNQEIPHKGAFCDLVW DQIRTIERNQEIPHKGAFCDLVWSDPEDVD R N Q H K G 0 0 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 7 0 864.44537 O00743 O00743 182 188 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.044235 94.006 By MS/MS 8 0 1 1 690980 690980 0 10427 117 10909 25902 20791 20791 1 8723.5 0 NQELEVVR EKQEHVKLQKLMEKKNQELEVVRQQRERLQ QKLMEKKNQELEVVRQQRERLQEELSQAES K N Q V R Q 0 1 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 985.51926 Q14203 Q14203 399 406 DCTN1 Dynactin subunit 1 yes yes 2 0.00060055 156.75 By MS/MS 3.5 0.5 1 1 2 2633100 2633100 0 10428 1432 10910 25903;25904 20792 20792 1 86898 0 NQEQEKVER ELLGQGLLLRSLQERNQEQEKVERRRQVPF RSLQERNQEQEKVERRRQVPFHLHINLELL R N Q E R R 0 1 1 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 9 1 1158.5629 Q99613;B5ME19 Q99613 659 667 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.2587E-09 204.79 By MS/MS 4.33 2.05 1 1 1 3 3657300 3657300 0 10429 2252 10911 25905;25906;25907 20793;20794;20795 20794 3 251120 0 NQEQEKVERR ELLGQGLLLRSLQERNQEQEKVERRRQVPF SLQERNQEQEKVERRRQVPFHLHINLELLE R N Q R R R 0 2 1 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 10 2 1314.664 Q99613;B5ME19 Q99613 659 668 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0063767 120.99 By MS/MS 4 0 1 1 419860 419860 0 10430 2252 10912 25908 20796 20796 1 39512 0 NQGDEEGTEIDTLQFR GLIPIHADPRLFEYRNQGDEEGTEIDTLQF QGDEEGTEIDTLQFRLQVRCTRNPHAAKDS R N Q F R L 0 1 1 2 0 2 3 2 0 1 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1850.8282 O15160 O15160 126 141 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 5.2349E-86 387.91 By MS/MS 7 0 1 1 4973500 4973500 0 10431 166 10913 25909 20797 20797 1 78074 0 NQGETPTTEVPAPFFLPASLSANNTPTR REEGKALLRQILQLRNQGETPTTEVPAPFF FFLPASLSANNTPTRRVSPLNLSSVTP___ R N Q T R R 3 1 3 0 0 1 2 1 0 0 2 0 0 2 5 2 5 0 0 1 0 0 28 0 2956.4567 Q9UJX2 Q9UJX2 558 585 CDC23 Cell division cycle protein 23 homolog yes yes 3 7.975E-13 167.04 By MS/MS 6 0 1 1 751870 751870 0 10432 2751 10914 25910 20798;20799 20799 2 5168.6 0 NQGFDVVLVDTAGR KDAAGIAMEAIAFARNQGFDVVLVDTAGRM RNQGFDVVLVDTAGRMQDNAPLMTALAKLI R N Q G R M 1 1 1 2 0 1 0 2 0 0 1 0 0 1 0 0 1 0 0 3 0 0 14 0 1489.7525 P08240 P08240 511 524 SRPR Signal recognition particle receptor subunit alpha yes yes 2 2.9097E-07 211.22 By MS/MS 3.75 2.38 1 1 1 1 4 5124400 5124400 0 10433 522 10915 25911;25912;25913;25914 20800;20801;20802;20803 20802 4 105190 0 NQGGGLSSSGAGEGQGPK KPQKQNDGQRKDPSKNQGGGLSSSGAGEGQ GGLSSSGAGEGQGPKKQTRLGLEAKKEENL K N Q P K K 1 0 1 0 0 2 1 7 0 0 1 1 0 0 1 3 0 0 0 0 0 0 18 0 1586.7285 P07814 P07814 992 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 4.4568E-17 260.73 By MS/MS 3 0.816 1 1 1 3 7454100 7454100 0 10434 512 10916 25915;25916;25917 20804;20805 20804 2 304210 0 NQGGGLSSSGAGEGQGPKK KPQKQNDGQRKDPSKNQGGGLSSSGAGEGQ GLSSSGAGEGQGPKKQTRLGLEAKKEENLA K N Q K K Q 1 0 1 0 0 2 1 7 0 0 1 2 0 0 1 3 0 0 0 0 0 0 19 1 1714.8234 P07814 P07814 992 1010 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.016814 69.289 By MS/MS 3.5 0.5 1 1 2 1333800 1333800 0 10435 512 10917 25918;25919 20806 20806 1 41216 0 NQGGYGGSSSSSSYGSGR SGPYGGGGQYFAKPRNQGGYGGSSSSSSYG GYGGSSSSSSYGSGRRF_____________ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 P09651 P09651 353 370 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 2 4.3555E-17 260.96 By MS/MS 7.5 0.5 1 1 2 3765200 3765200 0 10436 540 10918 25920;25921 20807 20807 1 53655 0 NQITTLQGQAK LDKKVEQDLWNHAFKNQITTLQGQAKNRAN HAFKNQITTLQGQAKNRANPNRSEVQANLS K N Q A K N 1 0 1 0 0 3 0 1 0 1 1 1 0 0 0 0 2 0 0 0 0 0 11 0 1200.6463 Q92540 Q92540 67 77 SMG7 Protein SMG7 yes yes 2 0.019958 115.7 By MS/MS 3 0 1 1 0 0 0 10437 2051 10919 25922 20808 20808 1 0 0 NQLELAAR AEMTRQLREREQRMRNQLELAARGPLRQTF EREQRMRNQLELAARGPLRQTFTHNPLLQP R N Q A R G 2 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 913.49813 Q15070 Q15070 387 394 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.0023351 139.97 By MS/MS By matching 8.25 1.3 2 1 1 3 1 10398000 10346000 52433 10438 1487 10920 25923;25924;25925;25926 20809;20810 20809 2 166620 94430 NQLLNIFVR LMLQHITLLMCSAYRNQLLNIFVRPSLVAV MCSAYRNQLLNIFVRPSLVAVALQMTPGFR R N Q V R P 0 1 2 0 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1115.6451 O15228 O15228 483 491 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.0088578 113.41 By MS/MS 5 0 1 1 0 0 0 10439 171 10921 25927 20811 20811 1 0 0 NQLLSCSADGTVR GHTDAVWGLAYSGIKNQLLSCSADGTVRLW IKNQLLSCSADGTVRLWNPQEKLPCICTYN K N Q V R L 1 1 1 1 1 1 0 1 0 0 2 0 0 0 0 2 1 0 0 1 0 0 13 0 1419.6776 Q13033 Q13033 599 611 STRN3 Striatin-3 yes yes 2 3.1305E-47 298.58 By MS/MS 4 0 1 1 0 0 0 10440 1346 10922 25928 20812 20812 1 0 0 NQLSQNR LKPKTPRGTKTPINRNQLSQNRGLGGIMVK GTKTPINRNQLSQNRGLGGIMVKRAYETMA R N Q N R G 0 1 2 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 858.43078 O94776 O94776 545 551 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.025527 108.09 By MS/MS 5.5 0.5 1 1 2 1338000 1338000 0 10441 365 10923 25929;25930 20813 20813 1 12916 0 NQLSTLPEELGDLPLVR ELCGLSSLRDLNVRRNQLSTLPEELGDLPL LSTLPEELGDLPLVRLDFSCNRVSRIPVSF R N Q V R L 0 1 1 1 0 1 2 1 0 0 5 0 0 0 2 1 1 0 0 1 0 0 17 0 1893.0207 O75427 O75427 192 208 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.00021479 194.23 By MS/MS 5.5 0.5 1 1 2 308100 308100 0 10442 326 10924 25931;25932 20814;20815;20816 20814 2 2623 0 NQLTAMSSVLAK PIGPHLQSMPSEQIRNQLTAMSSVLAKALE QIRNQLTAMSSVLAKALEVIKPAHILQEKE R N Q A K A 2 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 1 0 0 1 0 0 12 0 1261.67 Q14152 Q14152 521 532 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.8727E-12 231.07 By MS/MS 3.2 1.25 1 2 3 2 2 10 27660000 27660000 0 10443 1422 10925;10926 25933;25934;25935;25936;25937;25938;25939;25940;25941;25942 20817;20818;20819;20820;20821;20822;20823;20824 20822 823 8 1198300 0 NQLTSLPSAICK CIDQWVHVETLNLSRNQLTSLPSAICKLSK LSRNQLTSLPSAICKLSKLKKLYLNSNKLD R N Q C K L 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1330.6915 Q13045 Q13045 279 290 FLII Protein flightless-1 homolog yes yes 2 0.0013723 118.23 By MS/MS 3 0 1 1 155110 155110 0 10444 1348 10927 25943 20825 20825 1 2838 0 NQLTSNPENTVFDAK AFTPEGERLIGDAAKNQLTSNPENTVFDAK NQLTSNPENTVFDAKRLIGRTWNDPSVQQD K N Q A K R 1 0 3 1 0 1 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 15 0 1676.8006 P11021 P11021 82 96 HSPA5 78 kDa glucose-regulated protein yes yes 2 2.4752E-15 223.22 By MS/MS By MS/MS 7.25 2.28 2 1 1 3 1 35944000 35682000 261980 10445 571 10928 25944;25945;25946;25947 20826;20827;20828;20829 20826 4 382520 220010 NQLTSNPENTVFDAKR AFTPEGERLIGDAAKNQLTSNPENTVFDAK QLTSNPENTVFDAKRLIGRTWNDPSVQQDI K N Q K R L 1 1 3 1 0 1 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 16 1 1832.9017 P11021 P11021 82 97 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 6.1366E-07 231.74 By MS/MS By matching 6.33 2.21 1 1 2 1 1 1 1 1 8 1 47188000 47114000 74339 10446 571 10929 25948;25949;25950;25951;25952;25953;25954;25955;25956 20830;20831 20831 2 532760 9462.3 NQNDPLPGR FEGTVTKVIPKVPSKNQNDPLPGRIKVDFV PKVPSKNQNDPLPGRIKVDFVIPKELPFGD K N Q G R I 0 1 2 1 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 1009.4941 O75534 O75534 278 286 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0081244 103.74 By MS/MS 4.5 0.5 1 1 2 5732000 5732000 0 10447 333 10930 25957;25958 20832;20833;20834 20834 3 437500 0 NQNEALLQAIK QRDVRKANLKEKKERNQNEALLQAIKARNI KKERNQNEALLQAIKARNIRLSEAACEDED R N Q I K A 2 0 2 0 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1240.6776 O95801 O95801 217 227 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 9.6618E-08 202.2 By MS/MS 6.5 0.5 1 1 2 3881100 3881100 0 10448 427 10931 25959;25960 20835;20836 20836 2 40397 0 NQNIVLSAR ASEQRYDAEFFKKFRNQNIVLSARTYAQES FFKKFRNQNIVLSARTYAQESNVQALEILF R N Q A R T 1 1 2 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5618 A2RRP1 A2RRP1 722 730 NBAS Neuroblastoma-amplified sequence yes yes 2 0.010114 100.25 By MS/MS 2 0.816 1 1 1 3 511810 511810 0 10449 11 10932 25961;25962;25963 20837;20838 20837 2 124170 0 NQQFHKER QLDDEEGLPEKLVIKNQQFHKEREQPPRFA PEKLVIKNQQFHKEREQPPRFAQPGSFEYE K N Q E R E 0 1 1 0 0 2 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 8 1 1085.5366 Q15233 Q15233 244 251 NONO Non-POU domain-containing octamer-binding protein yes yes 2 0.012594 137.9 By MS/MS 6 0 1 1 563780 563780 0 10450 1496 10933 25964 20839 20839 1 3875.6 0 NQQPVLPAGLQVPK ERVGILLDEASGVNKNQQPVLPAGLQVPKT KNQQPVLPAGLQVPKTVVSSWNRKAAEYGK K N Q P K T 1 0 1 0 0 3 0 1 0 0 2 1 0 0 3 0 0 0 0 2 0 0 14 0 1487.846 Q01780 Q01780 137 150 EXOSC10 Exosome component 10 yes yes 2 0.0083988 94.409 By MS/MS 4 0 1 1 1061800 1061800 0 10451 1269 10934 25965 20840 20840 1 99918 0 NQQTIGAR YFTEAGLKELSEYVRNQQTIGARKELQKEL ELSEYVRNQQTIGARKELQKELQEQMSRGD R N Q A R K 1 1 1 0 0 2 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 8 0 886.46208 Q7L1Q6 Q7L1Q6 247 254 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.006314 119.41 By MS/MS 7 0 1 1 3920100 3920100 0 10452 1760 10935 25966 20841 20841 1 61538 0 NQSDADLEALR LSPTKLLPFLSNPYRNQSDADLEALRKKLS NPYRNQSDADLEALRKKLSNAPRPLKKRSS R N Q L R K 2 1 1 2 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1230.584 Q13625 Q13625 712 722 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 0.00052347 131.09 By MS/MS 3 0 1 1 636970 636970 0 10453 1406 10936 25967 20842 20842 1 11655 0 NQSFCPTVNLDK GYFGKVGMKHYHLKRNQSFCPTVNLDKLWT LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK R N Q D K L 0 0 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 0 1421.6609 P46776 P46776 66 77 RPL27A 60S ribosomal protein L27a yes yes 2 4.9865E-09 257.8 By MS/MS 9.5 0.5 1 1 2 2087000 2087000 0 10454 914 10937 25968;25969 20843 20843 1 58438 0 NQSIIVSGESGAGK AVAEEAYKQMARDEKNQSIIVSGESGAGKT KNQSIIVSGESGAGKTVSAKYAMRYFATVG K N Q G K T 1 0 1 0 0 1 1 3 0 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1345.6838 Q9ULV0;Q9NQX4;Q9Y4I1 Q9ULV0 156 169 MYO5B;MYO5C;MYO5A Unconventional myosin-Vb;Unconventional myosin-Vc;Unconventional myosin-Va no no 2 0.00045409 184.98 By MS/MS By matching 2 0 2 1 1 427980 380660 47323 10455 2775;2896 10938 25970;25971 20844 20844 1 128750 66924 NQTAEKEEFEHQQK KILDKCNEIINWLDKNQTAEKEEFEHQQKE KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K N Q Q K E 1 0 1 0 0 3 4 0 1 0 0 2 0 1 0 0 1 0 0 0 0 0 14 1 1744.8016 P11142 P11142 584 597 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 4.2658E-23 269.44 By MS/MS By MS/MS 5 0 3 2 1 4603100 4520600 82480 10456 572 10939 25972;25973;25974 20845;20846;20847 20847 3 45340 69265 NQTQVLR NQTYLVSERLEREERNQTQVLRQQQDEAYL ERLEREERNQTQVLRQQQDEAYLASLRADQ R N Q L R Q 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 857.47191 Q96CS3 Q96CS3 284 290 FAF2 FAS-associated factor 2 yes yes 2 0.013694 125.81 By MS/MS 6.5 0.5 1 1 2 21804000 21804000 0 10457 2126 10940 25975;25976 20848 20848 1 168980 0 NQVALNPQNTVFDAK VAFTDTERLIGDAAKNQVALNPQNTVFDAK NQVALNPQNTVFDAKRLIGRKFGDPVVQSD K N Q A K R 2 0 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 15 0 1657.8424 P0DMV9;P0DMV8 P0DMV9 57 71 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 1.2693E-33 313.52 By MS/MS By MS/MS 7.14 1.81 2 1 1 1 1 1 6 1 50109000 49974000 135270 10458 550 10941 25977;25978;25979;25980;25981;25982;25983 20849;20850;20851;20852;20853;20854;20855;20856 20853 8 557920 113600 NQVALNPQNTVFDAKR VAFTDTERLIGDAAKNQVALNPQNTVFDAK QVALNPQNTVFDAKRLIGRKFGDPVVQSDM K N Q K R L 2 1 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 16 1 1813.9435 P0DMV9;P0DMV8 P0DMV9 57 72 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 5.6719E-08 229.56 By MS/MS 7.14 1.81 2 1 1 1 1 1 7 46048000 46048000 0 10459 550 10942 25984;25985;25986;25987;25988;25989;25990 20857;20858;20859 20859 3 480310 0 NQVAMNPTNTVFDAK VAFTDTERLIGDAAKNQVAMNPTNTVFDAK NQVAMNPTNTVFDAKRLIGRRFDDAVVQSD K N Q A K R 2 0 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 0 15 0 1648.7879 P11142 P11142 57 71 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 5.6692E-33 305.3 By MS/MS By MS/MS 6.89 2.23 1 3 1 1 1 2 8 1 32270000 31988000 281510 10460 572 10943;10944 25991;25992;25993;25994;25995;25996;25997;25998;25999 20860;20861;20862;20863;20864;20865;20866 20862 258 7 363640 236410 NQVAMNPTNTVFDAKR VAFTDTERLIGDAAKNQVAMNPTNTVFDAK QVAMNPTNTVFDAKRLIGRRFDDAVVQSDM K N Q K R L 2 1 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 0 16 1 1804.889 P11142 P11142 57 72 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.00026571 187.11 By MS/MS By MS/MS 5 0 4 3 1 21034000 20951000 82715 10461 572 10945 26000;26001;26002;26003 20867;20868;20869;20870 20870 258 4 210130 69463 NQVEDLLATLEK WMHTDPVSQKNESVRNQVEDLLATLEKSGA SVRNQVEDLLATLEKSGAGVPAVILRRPNQ R N Q E K S 1 0 1 1 0 1 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 12 0 1371.7246 Q92542 Q92542 392 403 NCSTN Nicastrin yes yes 2 4.4392E-05 169.21 By MS/MS 4.5 0.5 1 1 2 328930 328930 0 10462 2052 10946 26004;26005 20871 20871 1 26417 0 NQVGDENWR DDLRDMFCKILHGFKNQVGDENWRRFSDQF ILHGFKNQVGDENWRRFSDQFPLPLKERLA K N Q W R R 0 1 2 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 9 0 1116.4948 Q92973 Q92973 870 878 TNPO1 Transportin-1 yes yes 2 0.051311 75.378 By MS/MS 4 0 1 1 442410 442410 0 10463 2082 10947 26006 20872 20872 1 41634 0 NQWQLSADDLKK PKTAWRLDCAQLKEKNQWQLSADDLKKLKP KEKNQWQLSADDLKKLKPGLEKDFLPLYFG K N Q K K L 1 0 1 2 0 2 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 12 1 1444.731 P09543 P09543 165 176 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.030194 84.169 By MS/MS 7 0 1 1 580500 580500 0 10464 537 10948 26007 20873 20873 1 9112.8 0 NQYCYGSR MQTPRMKLAVQFTNRNQYCYGSRDLLGLHN AVQFTNRNQYCYGSRDLLGLHNMKRRQLAR R N Q S R D 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 8 0 1046.424 Q7L8L6 Q7L8L6 705 712 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.025855 93.143 By MS/MS 5 0 1 1 2741200 2741200 0 10465 1771 10949 26008 20874 20874 1 27493 0 NQYDNDVTVWSPQGR ______________________________ NQYDNDVTVWSPQGRIHQIEYAMEAVKQGS R N Q G R I 0 1 2 2 0 2 0 1 0 0 0 0 0 0 1 1 1 1 1 2 0 0 15 0 1777.802 P25786 P25786 4 18 PSMA1 Proteasome subunit alpha type-1 yes yes 2 3.6671E-05 228.62 By MS/MS 8 0 1 1 3291400 3291400 0 10466 724 10950 26009 20875 20875 1 41554 0 NRDSDKTDTDWR AQDKDRDDRSFGRDRNRDSDKTDTDWRARP RDRNRDSDKTDTDWRARPATDSFDDYPPRR R N R W R A 0 2 1 4 0 0 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 0 12 2 1507.6651 P23588 P23588 189 200 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.0059558 97.779 By MS/MS By matching 5 0 2 1 1 6638400 6553500 84885 10467 708 10951 26010;26011 20876 20876 1 65728 71285 NREELGFRPEYSASQLK LGMIDRWYHPGCFVKNREELGFRPEYSASQ EELGFRPEYSASQLKGFSLLATEDKEALKK K N R L K G 1 2 1 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 17 2 2023.0123 P09874 P09874 166 182 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.020952 78.244 By MS/MS 5 0.816 1 1 1 3 5467500 5467500 0 10468 543 10952 26012;26013;26014 20877 20877 1 319800 0 NREILDESLR TVDQLIKELPELLQRNREILDESLRLLDEE ELLQRNREILDESLRLLDEEEATDNDLRAK R N R L R L 0 2 1 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 1 1243.6521 Q8WUM4 Q8WUM4 447 456 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.04429 96.665 By MS/MS 4 0 1 1 1044900 1044900 0 10469 2018 10953 26015 20878 20878 1 98331 0 NREPVQLETLSIR VSMNTHLKAVKMTLKNREPVQLETLSIRGN LKNREPVQLETLSIRGNNIRYFILPDSLPL K N R I R G 0 2 1 0 0 1 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 13 1 1553.8526 P62314 P62314 49 61 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 2;3 3.3616E-07 202 By MS/MS 10 0 2 2 2322700 2322700 0 10470 1155 10954 26016;26017 20879;20880 20880 2 125180 0 NRESEAFVQR LEASGTLLLLAPATRNRESEAFVQRLLWLR APATRNRESEAFVQRLLWLRGRGRLRYVNL R N R Q R L 1 2 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 10 1 1234.6054 Q9BSF4 Q9BSF4 103 112 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.0010776 145.9 By MS/MS 8.5 0.5 1 1 2 2116600 2116600 0 10471 2305 10955 26018;26019 20881 20881 1 27845 0 NRETHEIVALKR EKIGEGTYGTVFKAKNRETHEIVALKRVRL KAKNRETHEIVALKRVRLDDDDEGVPSSAL K N R K R V 1 2 1 0 0 0 2 0 1 1 1 1 0 0 0 0 1 0 0 1 0 0 12 2 1464.8161 Q00535 Q00535 23 34 CDK5 Cyclin-dependent-like kinase 5 yes yes 4 0.0099216 82.505 By MS/MS 8 0 1 1 445740 445740 0 10472 1261 10956 26020 20882 20882 1 5627.5 0 NRGDLTADSVQR PPECSSDVNLELRQRNRGDLTADSVQRGSR RQRNRGDLTADSVQRGSRHGLEQYLSRFEE R N R Q R G 1 2 1 2 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 12 1 1330.6589 P49069 P49069 135 146 CAMLG Calcium signal-modulating cyclophilin ligand yes yes 2 0.0026191 133.91 By MS/MS 7 0 1 1 639270 639270 0 10473 944 10957 26021 20883 20883 1 10035 0 NRIDYVSSAVR EDIARADNIFTATERNRIDYVSSAVRIDHA ATERNRIDYVSSAVRIDHAPDLPRPEVCFI R N R V R I 1 2 1 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 11 1 1278.668 Q8N3Z3 Q8N3Z3 91 101 GTPBP8 GTP-binding protein 8 yes yes 2 9.9895E-05 163.66 By MS/MS 8 0 1 1 1973300 1973300 0 10474 1913 10958 26022 20884 20884 1 24912 0 NRLENDGATALAEAFR AQGKPLALKVFVAGRNRLENDGATALAEAF RLENDGATALAEAFRVIGTLEEVHMPQNGI R N R F R V 4 2 2 1 0 0 2 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 16 1 1746.8649 P46060 P46060 190 205 RANGAP1 Ran GTPase-activating protein 1 yes yes 2;3 0.0027543 155.39 By MS/MS 5 0 2 2 1239200 1239200 0 10475 908 10959 26023;26024 20885;20886 20886 2 12428 0 NRNEQESAVHPR SPQRTWEQQQEVVSRNRNEQESAVHPREIF VSRNRNEQESAVHPREIFKQKERAMSTTSI R N R P R E 1 2 2 0 0 1 2 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 12 1 1435.6916 Q9UJU6 Q9UJU6 247 258 DBNL Drebrin-like protein yes yes 3 0.00023064 139.76 By MS/MS 6 0 1 1 496400 496400 0 10476 2749 10960 26025 20887 20887 1 3412.3 0 NRPEDYQGGR GVQGFPTIKIFGSNKNRPEDYQGGRTGEAI FGSNKNRPEDYQGGRTGEAIVDAALSALRQ K N R G R T 0 2 1 1 0 1 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 10 1 1190.5428 Q15084 Q15084 109 118 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.00129 142.98 By MS/MS By matching 6 0 2 1 1 2957600 2927700 29923 10477 1488 10961 26026;26027 20888 20888 1 20125 30663 NRPGPQTR FHPRFKREFIQEPAKNRPGPQTRSDLLLSG FIQEPAKNRPGPQTRSDLLLSGRDWNTLIV K N R T R S 0 2 1 0 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 8 1 924.48896 O14744 O14744 61 68 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.050445 87.639 By matching By MS/MS 5 0 2 1 1 550950 341450 209500 10478 137 10962 26028;26029 20889 20889 1 3424.6 175940 NRPPLPAGTNSK KDVYVQLYLQHLTARNRPPLPAGTNSKGPP TARNRPPLPAGTNSKGPPDFSSDEEREPTP R N R S K G 1 1 2 0 0 0 0 1 0 0 1 1 0 0 3 1 1 0 0 0 0 0 12 1 1250.6731 P42166;P42167 P42166 49 60 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.023675 108.31 By MS/MS By matching 6.33 0.471 2 1 2 1 2400100 2373800 26332 10479 875;876 10963 26030;26031;26032 20890 20890 1 19357 26983 NRQEYDALAK AECKKQILQAKRIRKNRQEYDALAKVIQHH KRIRKNRQEYDALAKVIQHHPDRHETLKEL K N R A K V 2 1 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 10 1 1206.5993 Q6I9Y2 Q6I9Y2 115 124 THOC7 THO complex subunit 7 homolog yes yes 2 0.039704 86.882 By MS/MS 9 0 1 1 236050 236050 0 10480 1679 10964 26033 20891 20891 1 4645.5 0 NRQEYEDIAVK ASQLTCLGCLELIAKNRQEYEDIAVKLGTD LIAKNRQEYEDIAVKLGTDLEYLKKVRGKV K N R V K L 1 1 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 11 1 1363.6732 O15294 O15294 972 982 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.022371 105.17 By MS/MS 4 0 1 1 1044000 1044000 0 10481 179 10965 26034 20892 20892 1 98249 0 NRVQNMALYADVGGK STETVFIVEISLTCKNRVQNMALYADVGGK NRVQNMALYADVGGKQFPVTRGQDVGRYQV K N R G K Q 2 1 2 1 0 1 0 2 0 0 1 1 1 0 0 0 0 0 1 2 0 0 15 1 1634.8199 P51571 P51571 59 73 SSR4 Translocon-associated protein subunit delta yes yes 2;3 0.0062591 96.306 By MS/MS 9.33 0.471 2 1 3 929370 929370 0 10482 998 10966;10967 26035;26036;26037 20893;20894;20895 20893 552 3 26687 0 NSALSAQLR TSLGLSEQKARETLKNSALSAQLREAATQA ARETLKNSALSAQLREAATQAQQTLGSTID K N S L R E 2 1 1 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 958.51959 P47897 P47897 26 34 QARS Glutamine--tRNA ligase yes yes 2 0.0077345 104.42 By MS/MS 4 0 1 1 1648300 1648300 0 10483 928 10968 26038 20896 20896 1 155120 0 NSDALANIVNGLALLR N S L R 3 1 3 1 0 0 0 1 0 1 4 0 0 0 0 1 0 0 0 1 0 0 16 0 1652.921 REV__Q8NI77 yes yes 2 0.0038271 105.46 By MS/MS 5 0 1 1 604170 604170 0 + 10484 2975 10969 26039 20897 20897 1 6059.5 0 NSDRTPLVSVLLEGPPHSGK TRVLDDGELLVQQTKNSDRTPLVSVLLEGP PLVSVLLEGPPHSGKTALAAKIAEESNFPF K N S G K T 0 1 1 1 0 0 1 2 1 0 3 1 0 0 3 3 1 0 0 2 0 0 20 1 2102.112 P46459 P46459 530 549 NSF Vesicle-fusing ATPase yes yes 3;4 6.3941E-06 145.79 By MS/MS 5 0 2 2 1434900 1434900 0 10485 912 10970 26040;26041 20898;20899;20900 20899 3 14391 0 NSEEQPSGGTTVLQR ______________________________ NSEEQPSGGTTVLQRLLQEQLRYGNPSENR R N S Q R L 0 1 1 0 0 2 2 2 0 0 1 0 0 0 1 2 2 0 0 1 0 0 15 0 1601.7645 Q4VCS5 Q4VCS5 3 17 AMOT Angiomotin yes yes 2 0.00060514 166.45 By MS/MS 3 0 1 1 118520 118520 0 10486 1584 10971 26042 20901 20901 1 2168.6 0 NSEPAGLETPEAK GQPPLSQSSDSSPTRNSEPAGLETPEAKVL TRNSEPAGLETPEAKVLFDKVASQGEVVRK R N S A K V 2 0 1 0 0 0 3 1 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1341.6412 P07814 P07814 890 902 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00019728 163.12 By MS/MS 3.5 1.12 1 1 1 1 4 5656600 5656600 0 10487 512 10972 26043;26044;26045;26046 20902;20903;20904 20904 3 289970 0 NSETFPTILEEAK TKDDAMAAVPAKVSKNSETFPTILEEAKEL SKNSETFPTILEEAKELVGRAS________ K N S A K E 1 0 1 0 0 0 3 0 0 1 1 1 0 1 1 1 2 0 0 0 0 0 13 0 1477.73 O60610 O60610 1253 1265 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.0024815 122.7 By MS/MS 3 0 1 1 98630 98630 0 10488 266 10973 26047 20905 20905 0 1804.7 0 NSFDCFKK NQRSTGSFVGELMYKNSFDCFKKVLRYEGF VGELMYKNSFDCFKKVLRYEGFFGLYRGLL K N S K K V 0 0 1 1 1 0 0 0 0 0 0 2 0 2 0 1 0 0 0 0 0 0 8 1 1044.4699 Q9UJS0;O75746 Q9UJS0 373 380 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 3 0.039386 98.299 By MS/MS 5.5 0.5 1 1 2 2040400 2040400 0 10489 2748;344 10974 26048;26049 20906 20906 1 19772 0 NSGSAEAAER KAAYYRQCFLYHPDRNSGSAEAAERFTRIS YHPDRNSGSAEAAERFTRISQAYVVLGSAT R N S E R F 3 1 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 10 0 990.43665 Q96LL9 Q96LL9 81 90 DNAJC30 DnaJ homolog subfamily C member 30 yes yes 2 0.0003174 139.15 By MS/MS 9 0 1 1 289110 289110 0 10490 2196 10975 26050 20907 20907 1 5689.7 0 NSGSELQVYYASPR LMAVQYTETTSSISRNSGSELQVYYASPRS RNSGSELQVYYASPRSYQDFFEAIRRRGDT R N S P R S 1 1 1 0 0 1 1 1 0 0 1 0 0 0 1 3 0 0 2 1 0 0 14 0 1569.7423 P18850 P18850 537 550 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.00044488 145.81 By MS/MS By matching 3 1.22 1 1 2 1 3 1151900 956270 195600 10491 656 10976 26051;26052;26053;26054 20908 20908 1 89992 135940 NSILAQVLDQSAR DAAQQEAKHREAEMRNSILAQVLDQSARAR MRNSILAQVLDQSARARLSNLALVKPEKTK R N S A R A 2 1 1 1 0 2 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1413.7576 O14737 O14737 41 53 PDCD5 Programmed cell death protein 5 yes yes 2 4.2357E-12 244.73 By MS/MS 10 0 1 1 723560 723560 0 10492 136 10977 26055 20909 20909 1 38997 0 NSILFLNSLDAK TAYFPPGATLNNKEKNSILFLNSLDAKEIY KEKNSILFLNSLDAKEIYLEVIHNLPDFEL K N S A K E 1 0 2 1 0 0 0 0 0 1 3 1 0 1 0 2 0 0 0 0 0 0 12 0 1333.7242 Q8IXB1 Q8IXB1 326 337 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 2.5962E-09 223.08 By MS/MS 5.5 1.12 1 1 1 1 4 1252200 1252200 0 10493 1874 10978 26056;26057;26058;26059 20910;20911 20911 2 37277 0 NSINQVVQLR KSMESVMVKYDATVRNSINQVVQLRYGEDG DATVRNSINQVVQLRYGEDGLAGESVEFQN R N S L R Y 0 1 2 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1169.6517 P24928 P24928 881 890 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 2.2248E-10 204.79 By MS/MS 2.5 0.5 1 1 2 978530 978530 0 10494 717 10979 26060;26061 20912;20913 20912 2 249920 0 NSKIEISELNR EELQITAGRHGDSVRNSKIEISELNRVIQR DSVRNSKIEISELNRVIQRLRSEIDNVKKQ R N S N R V 0 1 2 0 0 0 2 0 0 2 1 1 0 0 0 2 0 0 0 0 0 0 11 1 1301.6939 CON__P04264;P04264 P04264 393 403 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 3.1213E-13 227.36 By MS/MS By MS/MS 4.09 2.57 4 4 2 3 3 3 1 1 1 13 9 69979000 56494000 13485000 + 10495 471;45 10980 26062;26063;26064;26065;26066;26067;26068;26069;26070;26071;26072;26073;26074;26075;26076;26077;26078;26079;26080;26081;26082;26083 20914;20915;20916;20917;20918;20919;20920;20921;20922;20923;20924;20925;20926;20927;20928;20929;20930;20931;20932;20933;20934 20914 21 4015300 5321400 NSLCGYQIR RVCDELGCENGPGGRNSLCGYQIRMESRAC NGPGGRNSLCGYQIRMESRACESTRLLYCT R N S I R M 0 1 1 0 1 1 0 1 0 1 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1109.5288 Q7Z478 Q7Z478 656 664 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 6.5498E-06 163.15 By MS/MS 3 0 1 1 375410 375410 0 10496 1791 10981 26084 20935 20935 1 6869 0 NSLDDSAKK DKPVKIDKWDGSAVKNSLDDSAKKVLLEKY DGSAVKNSLDDSAKKVLLEKYKYVENFGLI K N S K K V 1 0 1 2 0 0 0 0 0 0 1 2 0 0 0 2 0 0 0 0 0 0 9 1 976.48254 Q15005 Q15005 58 66 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.047555 93.598 By MS/MS 9.5 0.5 1 1 2 1071200 1071200 0 10497 1469 10982 26085;26086 20936 20936 1 22735 0 NSLEDLTAEDFR PLHAMRKGLLDVLPKNSLEDLTAEDFRLLV LPKNSLEDLTAEDFRLLVNGCGEVNVQMLI K N S F R L 1 1 1 2 0 0 2 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 12 0 1408.647 O95071 O95071 2665 2676 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 5.7811E-25 280.17 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 4917600 4917600 0 10498 384 10983 26087;26088;26089;26090;26091;26092;26093;26094 20937;20938;20939;20940;20941 20939 4 621050 0 NSLESSGVR RFQEFSNIVIPLIKKNSLESSGVRTTKNEE IPLIKKNSLESSGVRTTKNEEENEKEKELQ K N S V R T 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 947.46722 Q5VYK3 Q5VYK3 1665 1673 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.013438 94.409 By MS/MS 2 0 1 1 1302100 1302100 0 10499 1656 10984 26095 20942 20942 1 440410 0 NSLESYAFNMK YKAEDEKQRDKVSSKNSLESYAFNMKATVE VSSKNSLESYAFNMKATVEDEKLQGKINDE K N S M K A 1 0 2 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 1 0 0 0 11 0 1302.5914 P11142 P11142 540 550 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.6317E-18 256.24 By MS/MS By MS/MS 5.6 0.8 3 1 1 4 1 32751000 32592000 159740 10500 572 10985;10986 26096;26097;26098;26099;26100 20943;20944;20945 20945 262 3 326280 134140 NSLGGDVLFVGK LEEVYPDLTPEETRRNSLGGDVLFVGKHHP TRRNSLGGDVLFVGKHHPLHDFILELYQTG R N S G K H 0 0 1 1 0 0 0 3 0 0 2 1 0 1 0 1 0 0 0 2 0 0 12 0 1204.6452 Q9H0D6 Q9H0D6 677 688 XRN2 5-3 exoribonuclease 2 yes yes 2 0.0070933 97.452 By MS/MS 4 0 1 1 987100 987100 0 10501 2407 10987 26101 20946 20946 1 92892 0 NSLLPFANETNSSR PPKFGTHHKALQEIRNSLLPFANETNSSRS RNSLLPFANETNSSRSTSEVNPQMLQDLQA R N S S R S 1 1 3 0 0 0 1 0 0 0 2 0 0 1 1 3 1 0 0 0 0 0 14 0 1548.7532 O95835 O95835 83 96 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0016091 114.24 By MS/MS 3 0 1 1 166970 166970 0 10502 430 10988 26102 20947 20947 1 3055.1 0 NSLLSLSDT YDTLNAWKQNLNKVKNSLLSLSDT______ NLNKVKNSLLSLSDT_______________ K N S D T - 0 0 1 1 0 0 0 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 9 0 948.47639 Q7L2H7 Q7L2H7 366 374 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.00070687 140.35 By MS/MS 7 0 1 1 2063800 2063800 0 10503 1762 10989 26103 20948 20948 1 32398 0 NSLTHISPR AFDHLVGLTKLNLGKNSLTHISPRVFQHLG KLNLGKNSLTHISPRVFQHLGNLQVLRLYE K N S P R V 0 1 1 0 0 0 0 0 1 1 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1023.5461 Q8TF66 Q8TF66 183 191 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 0.053139 80.916 By MS/MS 10 0 1 1 519140 0 519140 10504 2008 10990 26104 20949 20949 1 0 664650 NSLTSKDPDIK GNSQVARVAAGLQIKNSLTSKDPDIKAQYQ LQIKNSLTSKDPDIKAQYQQRWLAIDANAR K N S I K A 0 0 1 2 0 0 0 0 0 1 1 2 0 0 1 2 1 0 0 0 0 0 11 1 1216.6299 Q14974 Q14974 63 73 KPNB1 Importin subunit beta-1 yes yes 2 0.00016352 157.75 By MS/MS 4 0 1 1 2775700 2775700 0 10505 1462 10991 26105 20950 20950 1 261210 0 NSLTSKDPDIKAQYQQR GNSQVARVAAGLQIKNSLTSKDPDIKAQYQ LTSKDPDIKAQYQQRWLAIDANARREVKNY K N S Q R W 1 1 1 2 0 3 0 0 0 1 1 2 0 0 1 2 1 0 1 0 0 0 17 2 1991.0072 Q14974 Q14974 63 79 KPNB1 Importin subunit beta-1 yes yes 3 0.0061015 92.269 By MS/MS 4 0 1 1 916890 916890 0 10506 1462 10992 26106 20951 20951 1 86285 0 NSNILEDLETLR YQPMEKLYMVLITTKNSNILEDLETLRLFS TTKNSNILEDLETLRLFSRVIPEYCRALEE K N S L R L 0 1 2 1 0 0 2 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 0 1415.7256 P48444 P48444 73 84 ARCN1 Coatomer subunit delta yes yes 2 1.2836E-33 302.09 By MS/MS 6.5 1.12 1 1 1 1 4 22974000 22974000 0 10507 934 10993 26107;26108;26109;26110 20952;20953;20954;20955;20956;20957;20958;20959;20960 20954 9 159060 0 NSNPALNDNLEK TAGLDIFAKFSAYIKNSNPALNDNLEKGLL YIKNSNPALNDNLEKGLLKALKVLDNYLTS K N S E K G 1 0 4 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 0 1327.6368 O00299 O00299 120 131 CLIC1 Chloride intracellular channel protein 1 yes yes 2 0.0083305 93.839 By MS/MS 8 0 1 1 442660 442660 0 10508 98 10994 26111 20961 20961 1 5588.5 0 NSNVDSSYLESLYQSCPR SGTWIQYGEEKDKRKNSNVDSSYLESLYQS VDSSYLESLYQSCPRGVVPFQAGSRNYELS K N S P R G 0 1 2 1 1 1 1 0 0 0 2 0 0 0 1 5 0 0 2 1 0 0 18 0 2117.9324 Q7Z2W4 Q7Z2W4 630 647 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 7.855E-34 308.03 By MS/MS 4.5 0.5 1 1 2 4100300 4100300 0 10509 1778 10995 26112;26113 20962 20962 1 316880 0 NSPGSQVASNPR FTPSGILTPHALGSRNSPGSQVASNPRQAA GSRNSPGSQVASNPRQAAYEMRMQNNSSPS R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.00047282 134.98 By MS/MS 4.5 0.5 1 1 2 813810 813810 0 10510 2407 10996 26114;26115 20963 20963 1 63500 0 NSPLLSVSSQTITK LPDGLSTKDSAQKQKNSPLLSVSSQTITKE KNSPLLSVSSQTITKENNRNVHLEHSEQNP K N S T K E 0 0 1 0 0 1 0 0 0 1 2 1 0 0 1 4 2 0 0 1 0 0 14 0 1473.8039 Q8ND24 Q8ND24 46 59 RNF214 RING finger protein 214 yes yes 2 0.00043363 164.13 By MS/MS 4 0 1 1 790840 790840 0 10511 1955 10997 26116 20964 20964 1 74424 0 NSQSFFSGLFGGSSK AEAMALLAEAERKVKNSQSFFSGLFGGSSK NSQSFFSGLFGGSSKIEEACEIYARAANMF K N S S K I 0 0 1 0 0 1 0 3 0 0 1 1 0 3 0 5 0 0 0 0 0 0 15 0 1548.7209 P54920 P54920 23 37 NAPA Alpha-soluble NSF attachment protein yes yes 2 1.1154E-05 201.09 By MS/MS 8 0 1 1 131740 131740 0 10512 1049 10998 26117 20965 20965 1 1663.3 0 NSQSGNALTAYALFK LELIGLPDSVVSILKNSQSGNALTAYALFK NSQSGNALTAYALFKIATPARYTVTLGGTS K N S F K I 3 0 2 0 0 1 0 1 0 0 2 1 0 1 0 2 1 0 1 0 0 0 15 0 1583.7944 Q96ND0 Q96ND0 181 195 FAM210A Protein FAM210A yes yes 2 1.0494E-23 287.29 By MS/MS 9 0 1 1 965930 965930 0 10513 2203 10999 26118 20966 20966 1 19010 0 NSQTNKTEEVKEENLK PKPKQASAASYFQKRNSQTNKTEEVKEENL SQTNKTEEVKEENLKNVLSETPAICPPQNT R N S L K N 0 0 3 0 0 1 4 0 0 0 1 3 0 0 0 1 2 0 0 1 0 0 16 2 1889.933 O75717 O75717 983 998 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.00048579 156.2 By MS/MS 3 0 1 1 380460 380460 0 10514 342 11000 26119 20967 20967 1 6961.4 0 NSSAFSYQR PTFSVIESHPGTLLRNSSAFSYQRQTSNRS PGTLLRNSSAFSYQRQTSNRSEPSGEINID R N S Q R Q 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 9 0 1058.4781 P42695 P42695 506 514 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 0.0025078 114.86 By MS/MS 3 0 1 1 302640 302640 0 10515 885 11001 26120 20968 20968 1 5537.5 0 NSSCGGGISSSSSSR EGKLEGQATAVTPNKNSSCGGGISSSSSSR NSSCGGGISSSSSSRGGSAKGWQYSDHMEN K N S S R G 0 1 1 0 1 0 0 3 0 1 0 0 0 0 0 8 0 0 0 0 0 0 15 0 1428.5899 Q9BXB4 Q9BXB4 31 45 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 0.024384 80.905 By MS/MS 4 0 1 1 293020 293020 0 10516 2356 11002 26121 20969 20969 1 27575 0 NSSQAVQAVR HHTPFMHIGMAHNYRNSSQAVQAVRDAGYE AHNYRNSSQAVQAVRDAGYEISLGLMPKSI R N S V R D 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 10 0 1058.5469 Q9UDR5 Q9UDR5 190 199 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 2.5614E-08 200.56 By MS/MS 4 0 1 1 1555100 1555100 0 10517 2710 11003 26122 20970 20970 1 146340 0 NSSQDDLFPTSDTPR NLANVIAATGTTSKKNSSQDDLFPTSDTPR NSSQDDLFPTSDTPRAKVLKIEEVSDTSSL K N S P R A 0 1 1 3 0 1 0 0 0 0 1 0 0 1 2 3 2 0 0 0 0 0 15 0 1678.7435 Q9H6T3 Q9H6T3 479 493 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 3.255E-07 214.61 By MS/MS 5 0 1 1 3101700 3101700 0 10518 2459 11004 26123 20971 20971 1 31108 0 NSSQFFQSYVER YKKKYSDADIEPFLKNSSQFFQSYVERGLR FLKNSSQFFQSYVERGLRVIEMEREGKGRI K N S E R G 0 1 1 0 0 2 1 0 0 0 0 0 0 2 0 3 0 0 1 1 0 0 12 0 1490.679 Q14008 Q14008 1871 1882 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.3347E-09 240 By MS/MS 3 0.816 1 1 1 3 2011700 2011700 0 10519 1417 11005 26124;26125;26126 20972 20972 1 535890 0 NSSYFVEWIPNNVK SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 P04350;P68371;P07437;Q13509;Q13885;Q9BVA1;Q9BUF5 P68371 337 350 TUBB4A;TUBB4B;TUBB;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2;3 1.4304E-16 295.34 By MS/MS 6.5 1.12 1 4 2 1 8 175470000 175470000 0 10520 1212;509;1412;2331;472;1393;2324 11006 26127;26128;26129;26130;26131;26132;26133;26134 20973;20974;20975;20976;20977;20978;20979 20973 6 1216800 0 NSTECTLILTEGDSAK KGIPKLDDANDAGGRNSTECTLILTEGDSA STECTLILTEGDSAKTLAVSGLGVVGRDKY R N S A K T 1 0 1 1 1 0 2 1 0 1 2 1 0 0 0 2 3 0 0 0 0 0 16 0 1737.8091 P11388 P11388 451 466 TOP2A DNA topoisomerase 2-alpha yes yes 2 3.3046E-24 284.79 By MS/MS 2.5 0.5 1 1 2 658400 658400 0 10521 578 11007 26135;26136 20980 20980 1 42729 0 NSTIENTRR NRNRFCLGLLSNVNRNSTIENTRRHIGKGV LSNVNRNSTIENTRRHIGKGVHLYYVGGEV R N S R R H 0 2 2 0 0 0 1 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 9 1 1089.5527 O15198;Q99717;Q15797 O15198 322 330 SMAD9;SMAD5;SMAD1 Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 no no 2 0.038085 98.458 By MS/MS 6 0 1 1 718590 718590 0 10522 169;1533 11008 26137 20981 20981 1 4939.8 0 NSVAGSNPAKPGLGSPGR QLPDLSGPHSYSPGRNSVAGSNPAKPGLGS AGSNPAKPGLGSPGRYSPVHGSQLRRMARL R N S G R Y 2 1 2 0 0 0 0 4 0 0 1 1 0 0 3 3 0 0 0 1 0 0 18 1 1664.8594 Q86XL3 Q86XL3 900 917 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 8.9679E-05 137.39 By MS/MS 4.5 0.5 1 1 2 1291700 1291700 0 10523 1845 11009 26138;26139 20982 20982 1 104740 0 NSVFQQGMK VVVQWADLVICKTRRNSVFQQGMKNKILIF ICKTRRNSVFQQGMKNKILIFGLFEETALA R N S M K N 0 0 1 0 0 2 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 9 0 1037.4964 P05023;P13637;P50993 P05023 942 950 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2 0.0046988 109.48 By MS/MS 2.5 1.12 1 1 1 1 4 878660 878660 0 10524 481 11010 26140;26141;26142;26143 20983 20983 187 1 141390 0 NSYLEVLLK VAVLPHILDTGAAGRNSYLEVLLKLADKYK TGAAGRNSYLEVLLKLADKYKKKMWGWLWT R N S L K L 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 1 1 0 0 9 0 1077.607 Q15084 Q15084 314 322 PDIA6 Protein disulfide-isomerase A6 yes yes 2 9.4664E-05 163.16 By MS/MS 6 0 1 1 1157000 1157000 0 10525 1488 11011 26144 20984 20984 1 7953.2 0 NTAAVLEAAQELLR VWPVLRERAGAPGARNTAAVLEAAQELLRN RNTAAVLEAAQELLRNRPISLGHVVVAPPG R N T L R N 4 1 1 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 14 0 1497.8151 Q9BVQ7 Q9BVQ7 127 140 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.00044446 158.25 By MS/MS 5 0 1 1 45712 45712 0 10526 2338 11012 26145 20985 20985 1 458.47 0 NTAELQPESGKR GCDNMTCIIICFKPRNTAELQPESGKRKLE KPRNTAELQPESGKRKLEEVLSTEGAEENG R N T K R K 1 1 1 0 0 1 2 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 1 1328.6684 O15355 O15355 509 520 PPM1G Protein phosphatase 1G yes yes 2 3.5143E-12 238.86 By MS/MS 5 0 1 1 1045700 1045700 0 10527 184 11013 26146 20986 20986 1 10488 0 NTALHLACSK VSSASAELTLQDNSKNTALHLACSKGHETS QDNSKNTALHLACSKGHETSALLILEKITD K N T S K G 2 0 1 0 1 0 0 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 10 0 1113.5601 O15084;Q8NB46 O15084 891 900 ANKRD28;ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C no no 2 0.032314 68.786 By MS/MS 4 0 1 1 401670 401670 0 10528 158;1936 11014 26147 20987 20987 1 37800 0 NTALTLACFQGR LDMGSDINAQIETNRNTALTLACFQGRTEV TNRNTALTLACFQGRTEVVSLLLDRKANVE R N T G R T 2 1 1 0 1 1 0 1 0 0 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1350.6714 Q8IWZ3;O75179 O75179 1253 1264 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 2 5.6773E-06 221.59 By MS/MS 2 0.816 1 1 1 3 666900 666900 0 10529 304;1872 11015 26148;26149;26150 20988;20989;20990 20990 3 188230 0 NTCEAVVLGTLHPR GLPGVAEKSRERLIRNTCEAVVLGTLHPRT RNTCEAVVLGTLHPRTSITVVLQVVSDAGS R N T P R T 1 1 1 0 1 0 1 1 1 0 2 0 0 0 1 0 2 0 0 2 0 0 14 0 1565.7984 Q9NQT4 Q9NQT4 100 113 EXOSC5 Exosome complex component RRP46 yes yes 3 0.012038 88.163 By MS/MS 8 0 1 1 707490 707490 0 10530 2539 11016 26151 20991 20991 1 8932 0 NTDQASMPDNTAAQK SGVLQLGNIVFKKERNTDQASMPDNTAAQK NTDQASMPDNTAAQKVSHLLGINVTDFTRG R N T Q K V 3 0 2 2 0 2 0 0 0 0 0 1 1 0 1 1 2 0 0 0 0 0 15 0 1590.6944 P35579 P35579 359 373 MYH9 Myosin-9 no no 2 1.5325E-44 336.8 By MS/MS 2 0 2 2 1266700 1266700 0 10531 824 11017;11018 26152;26153 20992;20993 20993 412 2 428440 0 NTDQASMPENTVAQK SSVLQFGNISFKKERNTDQASMPENTVAQK NTDQASMPENTVAQKLCHLLGMNVMEFTRA R N T Q K L 2 0 2 1 0 2 1 0 0 0 0 1 1 0 1 1 2 0 0 1 0 0 15 0 1632.7413 P35580 P35580 366 380 MYH10 Myosin-10 yes yes 2 6.7467E-33 303.71 By MS/MS 2 0 1 1 320130 320130 0 10532 825 11019 26154 20994 20994 1 108280 0 NTDQGVYLGLSK ______________________________ GSKNTDQGVYLGLSKTQVLSPATAGSSSSD K N T S K T 0 0 1 1 0 1 0 2 0 0 2 1 0 0 0 1 1 0 1 1 0 0 12 0 1293.6565 Q13190 Q13190 11 22 STX5 Syntaxin-5 yes yes 2 1.7116E-12 232.56 By MS/MS 7 0 1 1 1943400 1943400 0 10533 1364 11020 26155 20995 20995 1 30508 0 NTDSDVNLVVPLEVIK RDYLFAVNIKLNQLRNTDSDVNLVVPLEVI TDSDVNLVVPLEVIKGDHEFTDYMIRSNES R N T I K G 0 0 2 2 0 0 1 0 0 1 2 1 0 0 1 1 1 0 0 4 0 0 16 0 1753.9462 Q8N1G2 Q8N1G2 472 487 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes yes 2 0.0005384 154.1 By MS/MS 4 0 1 1 141050 141050 0 10534 1905 11021 26156 20996 20996 1 13274 0 NTDTLSKK FAIINLFKQYSKKDKNTDTLSKKELKELLE QYSKKDKNTDTLSKKELKELLEKEFRQILK K N T K K E 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 0 0 8 1 905.48181 CON__P20930;P20930 CON__P20930 24 31 FLG Filaggrin yes no 2 0.0032329 158.07 By MS/MS 3 0 1 1 178280 0 178280 + 10535 53 11022 26157 20997 20997 1 0 22692 NTEAARDAILR GNQPQDQITITGYEKNTEAARDAILRIVGE GYEKNTEAARDAILRIVGELEQMVSEDVPL K N T L R I 3 2 1 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 11 1 1228.6524 Q00341 Q00341 1109 1119 HDLBP Vigilin yes yes 2 0.0031337 120.45 By MS/MS 3 0 1 1 997020 997020 0 10536 1260 11023 26158 20998 20998 1 18243 0 NTEAIGNEVTR SISPYLAVQLPARFKNTEAIGNEVTRLVRL ARFKNTEAIGNEVTRLVRLDPGAVSDVPEA K N T T R L 1 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 11 0 1202.5891 P42356 P42356 1564 1574 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.039568 75.416 By MS/MS 2 0 1 1 137350 137350 0 10537 880 11024 26159 20999 20999 1 46458 0 NTEAVDLITR GIVRYTKEVYVPHPRNTEAVDLITRLPKGA VPHPRNTEAVDLITRLPKGAVLYKTFVHVV R N T T R L 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 10 0 1130.5932 Q9P0M9 Q9P0M9 110 119 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 0.0012591 125.23 By MS/MS 10 0 1 1 2610500 2610500 0 10538 2666 11025 26160 21000 21000 1 140700 0 NTEAVDLITRLPK GIVRYTKEVYVPHPRNTEAVDLITRLPKGA PRNTEAVDLITRLPKGAVLYKTFVHVVPAK R N T P K G 1 1 1 1 0 0 1 0 0 1 2 1 0 0 1 0 2 0 0 1 0 0 13 1 1468.8249 Q9P0M9 Q9P0M9 110 122 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 1.1261E-10 223.08 By MS/MS 10 0 1 1 836340 836340 0 10539 2666 11026 26161 21001 21001 1 45075 0 NTEEEGLKYK VLADQGKSFATASHRNTEEEGLKYKSKVSL TASHRNTEEEGLKYKSKVSLKGNRESDGFR R N T Y K S 0 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 1 0 1 0 0 0 10 1 1209.5877 Q9NYF8 Q9NYF8 430 439 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 2 0.0042705 126.24 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 841110 810400 30706 10540 2633 11027 26162;26163;26164;26165;26166 21002 21002 1 97867 30706 NTELETLLAK LKQNLESNLTNLIKRNTELETLLAKLIQTC NLIKRNTELETLLAKLIQTCQHVEVNASRQ R N T A K L 1 0 1 0 0 0 2 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 10 0 1130.6183 O15344 O15344 234 243 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 2 0.00027977 140.17 By MS/MS 4.5 1.12 1 1 1 1 4 1623400 1623400 0 10541 183 11028 26167;26168;26169;26170 21003 21003 1 27413 0 NTFAEQPSTVGYAR VNPFEVVKVGLQANRNTFAEQPSTVGYARQ RNTFAEQPSTVGYARQIIKKEGWGLQGLNK R N T A R Q 2 1 1 0 0 1 1 1 0 0 0 0 0 1 1 1 2 0 1 1 0 0 14 0 1539.7318 Q9BQT8 Q9BQT8 142 155 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 0.00048082 179.67 By MS/MS 8 0 1 1 3935200 3935200 0 10542 2293 11029 26171 21004 21004 1 49682 0 NTFLWTEFTDR EPQPMGVRVICGHCKNTFLWTEFTDRTLAR GHCKNTFLWTEFTDRTLARCPHCRKVSSIG K N T D R T 0 1 1 1 0 0 1 0 0 0 1 0 0 2 0 0 3 1 0 0 0 0 11 0 1428.6674 Q86T03 Q86T03 179 189 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 2 4.9476E-09 221.32 By MS/MS 8 0 1 1 115020 115020 0 10543 1812 11030 26172 21005 21005 1 1452.2 0 NTFQGIYSDQK MDEYLKKMGRDQIFKNTFQGIYSDQKICKD QIFKNTFQGIYSDQKICKDCPHRYEREEAF K N T Q K I 0 0 1 1 0 2 0 1 0 1 0 1 0 1 0 1 1 0 1 0 0 0 11 0 1299.6095 Q9UPU5 Q9UPU5 1800 1810 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.048193 75.566 By MS/MS 2 0 1 1 334250 334250 0 10544 2802 11031 26173 21006 21006 0 113060 0 NTFSSGSDLNAVK ENWTEGKGLIVRGAKNTFSSGSDLNAVKSL AKNTFSSGSDLNAVKSLGTPEDGMAVCMFM K N T V K S 1 0 2 1 0 0 0 1 0 0 1 1 0 1 0 3 1 0 0 1 0 0 13 0 1338.6416 Q9NTX5 Q9NTX5 109 121 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 9.7811E-12 240 By MS/MS 8 0 1 1 1264900 1264900 0 10545 2578 11032 26174 21007 21007 1 15970 0 NTGIICTIGPASR HMCRLDIDSPPITARNTGIICTIGPASRSV ARNTGIICTIGPASRSVETLKEMIKSGMNV R N T S R S 1 1 1 0 1 0 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 0 13 0 1358.6976 P14618 P14618 44 56 PKM Pyruvate kinase PKM yes yes 2 2.0706E-06 202 By MS/MS By matching 5 3.16 2 1 1 1 1 1 1 7 1 20276000 20208000 67802 10546 614 11033 26175;26176;26177;26178;26179;26180;26181;26182 21008;21009;21010;21011 21010 3 358840 67802 NTIFTLGTR TAKKGFFSKPSLRSRNTIFTLGTRGSVISP PSLRSRNTIFTLGTRGSVISPTELEAPILV R N T T R G 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 0 3 0 0 0 0 0 9 0 1021.5556 Q8N1B4 Q8N1B4 342 350 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 0.0005466 148.56 By MS/MS 4 0 1 1 936310 936310 0 10547 1902 11034 26183 21012 21012 1 88113 0 NTILFLR EGEAQRYFDHALTLRNTILFLRHNKDLVAQ FDHALTLRNTILFLRHNKDLVAQTAQPDQP R N T L R H 0 1 1 0 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 7 0 875.52289 Q658Y4 Q658Y4 447 453 FAM91A1 Protein FAM91A1 yes yes 2 0.015743 120.49 By MS/MS 4 0 1 1 778010 778010 0 10548 1668 11035 26184 21013 21013 1 73216 0 NTKGGDAPAAGEDA IKLVSKHRAQVIYTRNTKGGDAPAAGEDA_ RNTKGGDAPAAGEDA_______________ R N T D A - 4 0 1 2 0 0 1 3 0 0 0 1 0 0 1 0 1 0 0 0 0 0 14 1 1272.5582 P62851 P62851 112 125 RPS25 40S ribosomal protein S25 yes yes 2 2.434E-10 232.17 By MS/MS By MS/MS 9.33 0.471 4 2 5 1 40658000 40425000 232930 10549 1176 11036 26185;26186;26187;26188;26189;26190 21014;21015;21016;21017;21018 21015 5 1131400 531150 NTKHEISEMNR EELQQTAGRHGDDLRNTKHEISEMNRMIQR DDLRNTKHEISEMNRMIQRLRAEIDNVKKQ R N T N R M 0 1 2 0 0 0 2 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 11 1 1357.6408 CON__P13647;P13647;CON__Q922U2 CON__P13647 381 391 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 2.0112E-13 211.63 By MS/MS By MS/MS 3.17 1.64 4 3 3 4 2 2 9 9 9809700 6408300 3401400 + 10550 52;74 11037;11038 26191;26192;26193;26194;26195;26196;26197;26198;26199;26200;26201;26202;26203;26204;26205;26206;26207;26208 21019;21020;21021;21022;21023;21024;21025;21026;21027;21028 21028 40 10 614370 1023100 NTKLDDLFLK DVTSAKALYEHLTAKNTKLDDLFLKRYASL HLTAKNTKLDDLFLKRYASLLKYAGEPVPF K N T L K R 0 0 1 2 0 0 0 0 0 0 3 2 0 1 0 0 1 0 0 0 0 0 10 1 1205.6656 P42704 P42704 1348 1357 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0047451 123.11 By MS/MS 3 0 1 1 563630 563630 0 10551 886 11039 26209 21029 21029 1 10313 0 NTKQEIAEINR EELQVTAGRHGDDLRNTKQEIAEINRMIQR DDLRNTKQEIAEINRMIQRLRSEIDHVKKQ R N T N R M 1 1 2 0 0 1 2 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 11 1 1314.6892 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 376 386 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 3 0.0059124 107.09 By MS/MS 10 0 1 1 164810 0 164810 + 10552 44;56;40 11040 26210 21030 21030 1 0 211000 NTKVEISELNR EELQITAGQHGDSLKNTKVEISELNRVIQR DSLKNTKVEISELNRVIQRLRSEIDSVKKQ K N T N R V 0 1 2 0 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1301.6939 CON__ENSEMBL:ENSBTAP00000038253 CON__ENSEMBL:ENSBTAP00000038253 389 399 yes yes 3 0.00081472 172.21 By MS/MS By MS/MS 5.25 2.86 2 1 1 2 2 11925000 3233800 8691200 + 10553 34 11041 26211;26212;26213;26214 21031;21032;21033;21034 21031 4 73414 1564800 NTLANSCGTGIR HKVLLRRLLASFFDRNTLANSCGTGIRSST FDRNTLANSCGTGIRSSTNDPRRKPLDSRV R N T I R S 1 1 2 0 1 0 0 2 0 1 1 0 0 0 0 1 2 0 0 0 0 0 12 0 1262.6037 Q96RE7;Q96BF6 Q96RE7 410 421 NACC1;NACC2 Nucleus accumbens-associated protein 1;Nucleus accumbens-associated protein 2 yes no 2 0.00040977 136.81 By MS/MS 5 0 1 1 256030 256030 0 10554 2220 11042 26215 21035 21035 1 2567.8 0 NTLCAPEVISLINTR YLHGDDHQDSDEFCRNTLCAPEVISLINTR NTLCAPEVISLINTRMLFWACSTNKPEGYR R N T T R M 1 1 2 0 1 0 1 0 0 2 2 0 0 0 1 1 2 0 0 1 0 0 15 0 1699.8927 Q96CS3 Q96CS3 191 205 FAF2 FAS-associated factor 2 yes yes 2;3 1.8798E-17 269.14 By MS/MS 6 0.707 1 2 1 4 21616000 21616000 0 10555 2126 11043 26216;26217;26218;26219 21036;21037;21038;21039 21039 4 151960 0 NTLEWCLPVIDAK VIGEIDGEYRHDSRRNTLEWCLPVIDAKNK RRNTLEWCLPVIDAKNKSGSLEFSIAGQPN R N T A K N 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 1 1 0 1 0 0 13 0 1557.7861 P48444 P48444 436 448 ARCN1 Coatomer subunit delta yes yes 2 0.00045763 136.01 By MS/MS 6 0 1 1 5765500 5765500 0 10556 934 11044 26220 21040 21040 1 39633 0 NTLLIAGLQAR FPDKPITQYPHAVGKNTLLIAGLQARNNAR AVGKNTLLIAGLQARNNARVIFSGSLDFFS K N T A R N 2 1 1 0 0 1 0 1 0 1 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1168.6928 P39656 P39656 240 250 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 4.5479E-14 246.63 By MS/MS 7 0.816 1 1 1 3 31336000 31336000 0 10557 855 11045 26221;26222;26223 21041;21042 21041 2 261310 0 NTLQLHR HHTIGGSRRAAWRRRNTLQLHRYR______ RRAAWRRRNTLQLHRYR_____________ R N T H R Y 0 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 880.4879 P61313 P61313 196 202 RPL15 60S ribosomal protein L15 yes yes 2 0.008979 139.31 By MS/MS 9 0.816 1 1 1 3 4075800 4075800 0 10558 1121 11046 26224;26225;26226 21043 21043 1 60739 0 NTNAAEESLPEIQKEHR AELKSLEDKAAEVVKNTNAAEESLPEIQKE NAAEESLPEIQKEHRNLLQELKVIQENEHA K N T H R N 2 1 2 0 0 1 4 0 1 1 1 1 0 0 1 1 1 0 0 0 0 0 17 1 1964.9552 Q9NTJ3 Q9NTJ3 975 991 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.0060017 89.466 By MS/MS 3 0 1 1 493150 493150 0 10559 2575 11047 26227 21044 21044 1 9023.3 0 NTNAGAPPGTAYQSPLPLSR ENPKSVHKSWDIFFRNTNAGAPPGTAYQSP APPGTAYQSPLPLSRGSLAAVAHAQSLVEA R N T S R G 3 1 2 0 0 1 0 2 0 0 2 0 0 0 4 2 2 0 1 0 0 0 20 0 2011.0123 Q02218 Q02218 82 101 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 6.7368E-06 182.7 By MS/MS 4 0 1 1 1468600 1468600 0 10560 1275 11048 26228 21045 21045 1 138210 0 NTNYDVFEK LMSIDQRKKMLKNLRNTNYDVFEKICWGLG MLKNLRNTNYDVFEKICWGLGIEYTFPPLY R N T E K I 0 0 2 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 9 0 1128.5088 P82914 P82914 172 180 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 7.615E-05 159.34 By MS/MS 8.5 0.5 1 1 2 5581700 5581700 0 10561 1235 11049 26229;26230 21046;21047 21047 2 84773 0 NTPLCDSFVFR ILAYNYKMEQISKGRNTPLCDSFVFRKVRS SKGRNTPLCDSFVFRKVRSLLGGNIRLLLC R N T F R K 0 1 1 1 1 0 0 0 0 0 1 0 0 2 1 1 1 0 0 1 0 0 11 0 1354.634 O95573 O95573 425 435 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 7.3806E-06 175.65 By MS/MS 6 0.816 1 1 1 3 8156900 8156900 0 10562 417 11050 26231;26232;26233 21048 21048 1 80841 0 NTPLCDSFVFRK ILAYNYKMEQISKGRNTPLCDSFVFRKVRS KGRNTPLCDSFVFRKVRSLLGGNIRLLLCG R N T R K V 0 1 1 1 1 0 0 0 0 0 1 1 0 2 1 1 1 0 0 1 0 0 12 1 1482.7289 O95573 O95573 425 436 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 0.021257 93.561 By MS/MS 5.5 0.5 1 1 2 2799200 2799200 0 10563 417 11051 26234;26235 21049 21049 1 27307 0 NTPSFLIACNK AEFLYQVLIDSMGLKNTPSFLIACNKQDIA MGLKNTPSFLIACNKQDIAMAKSAKLIQQQ K N T N K Q 1 0 2 0 1 0 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1263.6282 Q9Y5M8 Q9Y5M8 171 181 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.00011847 150.27 By MS/MS 8.5 0.5 1 1 2 8453100 8453100 0 10564 2917 11052 26236;26237 21050;21051 21050 2 109180 0 NTSAAIQAYR LGAWTLMGHEYMEMKNTSAAIQAYRHAIEV YMEMKNTSAAIQAYRHAIEVNKRDYRAWYG K N T Y R H 3 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 10 0 1093.5516 Q9UJX2 Q9UJX2 380 389 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.01093 92.239 By MS/MS 6 0 1 1 794210 794210 0 10565 2751 11053 26238 21052 21052 1 5459.6 0 NTSFAYPAIR LMVRKPALELLHYLKNTSFAYPAIRYLLYG LHYLKNTSFAYPAIRYLLYGEKGTGKTLSL K N T I R Y 2 1 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 10 0 1138.5771 P51398 P51398 114 123 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 6.2504E-15 239.6 By MS/MS 7.5 0.5 1 1 2 13150000 13150000 0 10566 993 11054 26239;26240 21053 21053 1 204830 0 NTTHGSDSVVSASR APDSIRGSFGLTDTRNTTHGSDSVVSASRE RNTTHGSDSVVSASREIAAFFPDFSEQRWY R N T S R E 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 4 2 0 0 2 0 0 14 0 1416.6593 O75414 O75414 126 139 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.0071239 98 By MS/MS 9 0 1 1 301460 301460 0 10567 325 11055 26241 21054 21054 1 5932.8 0 NTTIPTKK GIETLGGVFTKLINRNTTIPTKKSQVFSTA FTKLINRNTTIPTKKSQVFSTAADGQTQVE R N T K K S 0 0 1 0 0 0 0 0 0 1 0 2 0 0 1 0 3 0 0 0 0 0 8 1 901.52328 P38646 P38646 461 468 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 0.016871 125.81 By MS/MS By MS/MS 6 1.07 3 2 1 1 5 2 39749000 39455000 294100 10568 850 11056 26242;26243;26244;26245;26246;26247;26248 21055;21056;21057 21056 3 392480 252780 NTVEITELPVR QNQYAVSGEIFVVDRNTVEITELPVRTWTQ VVDRNTVEITELPVRTWTQVYKEQVLEPML R N T V R T 0 1 1 0 0 0 2 0 0 1 1 0 0 0 1 0 2 0 0 2 0 0 11 0 1269.6929 Q02880 Q02880 940 950 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0010531 130.01 By MS/MS 2.5 0.5 1 1 2 451860 451860 0 10569 1282 11057 26249;26250 21058;21059 21058 2 110450 0 NTVVATGGYGR ALCIEDGSIHRIRAKNTVVATGGYGRTYFS IRAKNTVVATGGYGRTYFSCTSAHTSTGDG K N T G R T 1 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 1 2 0 0 11 0 1093.5516 P31040 P31040 251 261 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 5.8347E-05 155.53 By MS/MS By matching 6.2 1.17 2 1 1 1 4 1 5094300 5064000 30323 10570 783 11058 26251;26252;26253;26254;26255 21060;21061 21060 2 50663 25465 NTVVLFVPQQEAWVVER ASGRAPRRASSGLPRNTVVLFVPQQEAWVV VVLFVPQQEAWVVERMGRFHRILEPGLNIL R N T E R M 1 1 1 0 0 2 2 0 0 0 1 0 0 1 1 0 1 1 0 5 0 0 17 0 2013.0684 Q9UJZ1 Q9UJZ1 35 51 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.00084308 119.32 By MS/MS 7 0 1 1 244710 244710 0 10571 2755 11059 26256 21062 21062 1 3841.5 0 NTWDCGLQILK VIKTRMQGLEAHKYRNTWDCGLQILKKEGL HKYRNTWDCGLQILKKEGLKAFYKGTVPRL R N T L K K 0 0 1 1 1 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 0 0 11 0 1346.6653 P53007 P53007 258 268 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 1.0869E-07 202.05 By MS/MS 8 0 1 1 2153900 2153900 0 10572 1026 11060 26257 21063 21063 1 27192 0 NTWDCGLQILKK VIKTRMQGLEAHKYRNTWDCGLQILKKEGL KYRNTWDCGLQILKKEGLKAFYKGTVPRLG R N T K K E 0 0 1 1 1 1 0 1 0 1 2 2 0 0 0 0 1 1 0 0 0 0 12 1 1474.7602 P53007 P53007 258 269 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2;3 2.7975E-12 228.64 By MS/MS 8 0 2 2 2756400 2756400 0 10573 1026 11061 26258;26259 21064;21065 21065 2 34799 0 NVAIFTAGQESPIILR NFPTSSIAFLGQNERNVAIFTAGQESPIIL VAIFTAGQESPIILRDGNGTIYPMAKDCMG R N V L R D 2 1 1 0 0 1 1 1 0 3 1 0 0 1 1 1 1 0 0 1 0 0 16 0 1727.957 O95071 O95071 798 813 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 9.3441E-17 260.5 By MS/MS 3 1.58 1 1 1 1 4 727960 727960 0 10574 384 11062 26260;26261;26262;26263 21066;21067;21068;21069;21070 21069 5 109840 0 NVALGNAIR PYLSEVLTFCLEVARNVALGNAIRIRILCC CLEVARNVALGNAIRIRILCCLTFLVKVKS R N V I R I 2 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 926.52976 Q8TEX9 Q8TEX9 256 264 IPO4 Importin-4 yes yes 2 0.025226 89.296 By MS/MS 3 0 1 1 1864500 1864500 0 10575 2005 11063 26264 21071 21071 1 34116 0 NVCTEAGMFAIR AIVKLSDGFNGADLRNVCTEAGMFAIRADH DLRNVCTEAGMFAIRADHDFVVQEDFMKAV R N V I R A 2 1 1 0 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 12 0 1367.6326 P62333 P62333 345 356 PSMC6 26S protease regulatory subunit 10B yes yes 2 4.9269E-06 187.42 By MS/MS 7 0 2 2 3136700 3136700 0 10576 1159 11064;11065 26265;26266 21072;21073 21072 662 2 49241 0 NVDAIDDAAAPK VPPPLVDKSAEKQAKNVDAIDDAAAPKQFL QAKNVDAIDDAAAPKQFLAKQEVAKDVTSE K N V P K Q 4 0 1 3 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 12 0 1198.583 Q8NEN9 Q8NEN9 638 649 PDZD8 PDZ domain-containing protein 8 yes yes 2 0.0052089 102.95 By MS/MS 1 0 1 1 119220 119220 0 10577 1962 11066 26267 21074 21074 1 28728 0 NVDEAINFINER QEEIFGPILPIVPVKNVDEAINFINEREKP PVKNVDEAINFINEREKPLALYVFSHNHKL K N V E R E 1 1 3 1 0 0 2 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 12 0 1432.6947 P51648 P51648 344 355 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 7.3243E-34 307.97 By MS/MS 8 1.41 1 1 1 1 1 5 16739000 16739000 0 10578 1002 11067 26268;26269;26270;26271;26272 21075;21076;21077 21075 3 130540 0 NVDILKDPETVK LPNQVWDSIIQQATKNVDILKDPETVKQLG ATKNVDILKDPETVKQLGSILKTNVRACKA K N V V K Q 0 0 1 2 0 0 1 0 0 1 1 2 0 0 1 0 1 0 0 2 0 0 12 1 1369.7453 O14980 O14980 675 686 XPO1 Exportin-1 yes yes 2;3 3.5317E-17 224.75 By MS/MS 4.5 0.5 2 2 4 9528300 9528300 0 10579 153 11068 26273;26274;26275;26276 21078;21079 21078 2 807680 0 NVDLLSDMVQEHDEPILK EDPKGIPEFWLTVFKNVDLLSDMVQEHDEP LLSDMVQEHDEPILKHLKDIKVKFSDAGQP K N V L K H 0 0 1 3 0 1 2 0 1 1 3 1 1 0 1 1 0 0 0 2 0 0 18 0 2094.0303 P55209 P55209 177 194 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2;3 2.2421E-27 293.29 By MS/MS 6 0 2 2 7712300 7712300 0 10580 1058 11069 26277;26278 21080;21081 21081 2 53016 0 NVDLSTFYQNR IQCYTEAISLCPTEKNVDLSTFYQNRAAAF PTEKNVDLSTFYQNRAAAFEQLQKWKEVAQ K N V N R A 0 1 2 1 0 1 0 0 0 0 1 0 0 1 0 1 1 0 1 1 0 0 11 0 1355.647 O94826 O94826 149 159 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 1.6317E-18 256.24 By MS/MS 5 0 1 1 7522600 7522600 0 10581 369 11070 26279 21082 21082 1 75448 0 NVDSNNKELSIAIR NKLQYFMEQFYGIIRNVDSNNKELSIAIRG RNVDSNNKELSIAIRGYGLFAGPCKVINAK R N V I R G 1 1 3 1 0 0 1 0 0 2 1 1 0 0 0 2 0 0 0 1 0 0 14 1 1571.8267 P78527 P78527 351 364 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.5877E-07 222.2 By MS/MS 1.5 0.5 1 1 2 1279400 1279400 0 10582 1225 11071 26280;26281 21083;21084 21083 2 385010 0 NVDVYDKR LLISKLQDEFENRTRNVDVYDKRENPLLPE EFENRTRNVDVYDKRENPLLPEEEEQRAIA R N V K R E 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 2 0 0 8 1 1007.5036 P78344 P78344 181 188 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.010261 134.77 By MS/MS By matching 4.33 0.471 2 1 2 1 10051000 10018000 32622 10583 1219 11072 26282;26283;26284 21085;21086 21086 2 913950 69507 NVEAMNFADIER VAVATPRGLVVPVIRNVEAMNFADIERTIT VIRNVEAMNFADIERTITELGEKARKNELA R N V E R T 2 1 2 1 0 0 2 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 12 0 1407.6453 P36957 P36957 334 345 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 1.8276E-08 206.36 By MS/MS By MS/MS 6.4 0.49 3 2 4 1 10290000 10082000 208440 10584 842 11073;11074 26285;26286;26287;26288;26289 21087;21088;21089 21089 424 3 73885 213590 NVEDDYIANLR FSEEYTGSSLKTVERNVEDDYIANLRNNCW TVERNVEDDYIANLRNNCWKEKQQKEGLLY R N V L R N 1 1 2 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1320.631 Q9NXW2 Q9NXW2 316 326 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 1.5566E-18 256.91 By MS/MS 7 0 1 1 5460800 5460800 0 10585 2630 11075 26290 21090 21090 1 85725 0 NVEDFTGPR RSVPVRLHVSRIMLKNVEDFTGPRERSDLG SRIMLKNVEDFTGPRERSDLGFITFDITAD K N V P R E 0 1 1 1 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 9 0 1033.4829 P61009 P61009 50 58 SPCS3 Signal peptidase complex subunit 3 yes yes 2 0.0020816 120.27 By MS/MS 9 0 1 1 4547400 4547400 0 10586 1103 11076 26291 21091 21091 1 89494 0 NVEDLSGGELQR AIVCQQLDLTHLKERNVEDLSGGELQRFAC KERNVEDLSGGELQRFACAVVCIQKADIFM R N V Q R F 0 1 1 1 0 1 2 2 0 0 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1315.6368 P61221 P61221 213 224 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 2 8.6646E-18 252.14 By MS/MS 5.5 0.5 1 1 2 6930400 6930400 0 10587 1117 11077 26292;26293 21092;21093 21092 2 54218 0 NVEELVIVLK RKKTLQLALDLVSSRNVEELVIVLKKEVIK LVSSRNVEELVIVLKKEVIKTNNVSEHEDT R N V L K K 0 0 1 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 3 0 0 10 0 1154.6911 P53618 P53618 352 361 COPB1 Coatomer subunit beta yes yes 2 7.6416E-05 169.65 By MS/MS 4.5 0.5 1 1 2 768320 768320 0 10588 1033 11078 26294;26295 21094;21095 21094 2 58160 0 NVEELVIVLKK RKKTLQLALDLVSSRNVEELVIVLKKEVIK VSSRNVEELVIVLKKEVIKTNNVSEHEDTD R N V K K E 0 0 1 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 3 0 0 11 1 1282.786 P53618 P53618 352 362 COPB1 Coatomer subunit beta yes yes 2;3 2.7685E-06 200.71 By MS/MS 4.8 0.748 2 2 1 5 12641000 12641000 0 10589 1033 11079 26296;26297;26298;26299;26300 21096;21097;21098 21098 3 789450 0 NVELVEGEEGR IVGTGSNACYMEEMRNVELVEGEEGRMCVN EEMRNVELVEGEEGRMCVNMEWGAFGDNGC R N V G R M 0 1 1 0 0 0 4 2 0 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1229.5888 P52789 P52789 692 702 HK2 Hexokinase-2 yes yes 2 0.0026684 110.08 By MS/MS 4 0 1 1 1414900 1414900 0 10590 1023 11080 26301 21099 21099 1 133150 0 NVENFLEACR PSPAVPKLTMAKCRRNVENFLEACRKIGVP AKCRRNVENFLEACRKIGVPQEQLCLPLHI R N V C R K 1 1 2 0 1 0 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1250.5714 Q96II8;Q9Y2L9 Q96II8 721 730 LRCH3;LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 3;Leucine-rich repeat and calponin homology domain-containing protein 1 no no 2 1.8738E-10 208.11 By MS/MS 4 0 1 1 737960 737960 0 10591 2174;2836 11081 26302 21100 21100 1 69447 0 NVESFASMLR ELLQKVEPLQKGSPKNVESFASMLRHSPLT KGSPKNVESFASMLRHSPLTQMGPAKDKLV K N V L R H 1 1 1 0 0 0 1 0 0 0 1 0 1 1 0 2 0 0 0 1 0 0 10 0 1152.5597 Q9Y2Q9 Q9Y2Q9 76 85 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 5.9247E-21 266.99 By MS/MS 9.4 0.49 3 2 5 3696700 3696700 0 10592 2838 11082;11083 26303;26304;26305;26306;26307 21101;21102;21103;21104;21105 21103 1183 5 74060 0 NVESFLEACR PSPAVPKLSALKARKNVESFLEACRKMGVP LKARKNVESFLEACRKMGVPEADLCSPSDL K N V C R K 1 1 1 0 1 0 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 10 0 1223.5605 O75427 O75427 603 612 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 1.2257E-05 172.98 By MS/MS 5 0 1 1 836880 836880 0 10593 326 11084 26308 21106 21106 1 8393.5 0 NVESGEEELASK WDRREPLSLINVRKRNVESGEEELASKLDH RKRNVESGEEELASKLDHYKAKATRHIFLI R N V S K L 1 0 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1290.5939 Q96HS1 Q96HS1 77 88 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 5.4279E-05 166.11 By MS/MS 9 0.816 1 1 1 3 3177200 3177200 0 10594 2168 11085 26309;26310;26311 21107;21108;21109 21108 3 65527 0 NVEVLHLGK WNGLEELNNAIKYTKNVEVLHLGKVWIPDD AIKYTKNVEVLHLGKVWIPDDLRKRLNIEM K N V G K V 0 0 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 1007.5764 O43933 O43933 403 411 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0022978 117.53 By MS/MS 3 0 1 1 579340 579340 0 10595 247 11086 26312 21110 21110 1 10600 0 NVFNALIR TADGRLPADQRRGYKNVFNALIRITREEGV DQRRGYKNVFNALIRITREEGVLTLWRGCI K N V I R I 1 1 2 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 945.5396 Q02978 Q02978 163 170 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.0016143 146.94 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 24230000 24230000 0 10596 1284 11087 26313;26314;26315;26316;26317;26318 21111;21112;21113;21114;21115;21116;21117;21118 21114 8 392940 0 NVGFQVR VAQRVSHELGPSLRRNVGFQVRLESKPPSR ELGPSLRRNVGFQVRLESKPPSRGGALLFC R N V V R L 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 7 0 818.43989 Q7L2E3 Q7L2E3 514 520 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.040164 97.071 By MS/MS 4 0.816 1 1 1 3 3928200 3928200 0 10597 1761 11088 26319;26320;26321 21119 21119 1 119210 0 NVGLDIEAEVPAVK EVISKLYAVHQEGNKNVGLDIEAEVPAVKD KNVGLDIEAEVPAVKDMLEAGILDTYLGKY K N V V K D 2 0 1 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 3 0 0 14 0 1452.7824 P50990 P50990 477 490 CCT8 T-complex protein 1 subunit theta yes yes 2 2.9007E-07 211.26 By MS/MS 8 1.58 1 1 1 1 4 16760000 16760000 0 10598 984 11089 26322;26323;26324;26325 21120;21121 21120 2 119410 0 NVICDKCEGR EDLYNGATRKLALQKNVICDKCEGRGGKKG LALQKNVICDKCEGRGGKKGAVECCPNCRG K N V G R G 0 1 1 1 2 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 1 1249.5543 P31689 P31689 131 140 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.0024858 133.23 By MS/MS 6.5 0.5 1 1 2 11266000 11266000 0 10599 787 11090 26326;26327 21122;21123 21123 2 100560 0 NVIETCKEAGVQK NNKELFYRVNYIGTKNVIETCKEAGVQKLI TKNVIETCKEAGVQKLILTSSASVIFEGVD K N V Q K L 1 0 1 0 1 1 2 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 13 1 1474.745 Q15738 Q15738 127 139 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.003427 122.18 By MS/MS 8 0.816 1 1 1 3 3066100 3066100 0 10600 1526 11091 26328;26329;26330 21124 21124 0 48002 0 NVIFQPVAELK FTTDDSICVLGISKRNVIFQPVAELKKQTD ISKRNVIFQPVAELKKQTDFEHRIPKEQWW R N V L K K 1 0 1 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 0 2 0 0 11 0 1256.7129 Q01813 Q01813 726 736 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.0052503 103.26 By MS/MS 4.5 0.5 1 1 2 1012500 1012500 0 10601 1271 11092 26331;26332 21125 21125 1 29990 0 NVIHASDSVEGAQR APGTIRGDFSVHISRNVIHASDSVEGAQRE RNVIHASDSVEGAQREIQLWFQSSELVSWA R N V Q R E 2 1 1 1 0 1 1 1 1 1 0 0 0 0 0 2 0 0 0 2 0 0 14 0 1481.7223 O00746 O00746 148 161 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 3 0.033945 84.892 By MS/MS 10 0 1 1 196490 196490 0 10602 118 11093 26333 21126 21126 1 10590 0 NVIVLQTVLQEVR VLLHQIDVLEDPAIRNVIVLQTVLQEVRNR IRNVIVLQTVLQEVRNRSAPVYKRIRDVTN R N V V R N 0 1 1 0 0 2 1 0 0 1 2 0 0 0 0 0 1 0 0 4 0 0 13 0 1509.8879 Q9Y2L1 Q9Y2L1 87 99 DIS3 Exosome complex exonuclease RRP44 yes yes 2 8.0479E-34 312.78 By MS/MS 5 1 1 1 2 1115300 1115300 0 10603 2834 11094 26334;26335 21127;21128;21129 21129 3 43116 0 NVIVNGLVLASDGQK LLVLATALFGQPPFKNVIVNGLVLASDGQK NVIVNGLVLASDGQKMSKRKKNYPDPVSII K N V Q K M 1 0 2 1 0 1 0 2 0 1 2 1 0 0 0 1 0 0 0 3 0 0 15 0 1525.8464 P41252 P41252 586 600 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.026E-23 274.8 By MS/MS 3.5 0.5 1 1 2 1557200 1557200 0 10604 871 11095 26336;26337 21130 21130 1 109400 0 NVKGPVREGDVLTLLESER VRVEFMDDTSRSIIRNVKGPVREGDVLTLL PVREGDVLTLLESEREARRLR_________ R N V E R E 0 2 1 1 0 0 3 2 0 0 3 1 0 0 1 1 1 0 0 3 0 0 19 2 2110.1382 P62857 P62857 45 63 RPS28 40S ribosomal protein S28 yes yes 3;4 0.0025789 93.753 By MS/MS 10 0 2 2 571320 571320 0 10605 1178 11096 26338;26339 21131;21132 21131 2 30792 0 NVLCSACSGQGGK EDLYNGKTTKLQLSKNVLCSACSGQGGKSG SKNVLCSACSGQGGKSGAVQKCSACRGRGV K N V G K S 1 0 1 0 2 1 0 3 0 0 1 1 0 0 0 2 0 0 0 1 0 0 13 0 1336.5864 O60884 O60884 140 152 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 1.8114E-11 205.12 By MS/MS 6 0 1 1 0 0 0 10606 285 11097 26340 21133 21133 1 0 0 NVLITDFFGSVR STPGHRTDLFQRDPKNVLITDFFGSVRKVE DPKNVLITDFFGSVRKVEITTETIKLQQDS K N V V R K 0 1 1 1 0 0 0 1 0 1 1 0 0 2 0 1 1 0 0 2 0 0 12 0 1366.7245 Q92643 Q92643 297 308 PIGK GPI-anchor transamidase yes yes 2 0.00027614 151.13 By MS/MS 7 0 1 1 157630 157630 0 10607 2066 11098 26341 21134 21134 1 2474.4 0 NVLLDPQLVPGGGASEMAVAHALTEK SEVERNLQDAMQVCRNVLLDPQLVPGGGAS GGASEMAVAHALTEKSKAMTGVEQWPYRAV R N V E K S 4 0 1 1 0 1 2 3 1 0 4 1 1 0 2 1 1 0 0 3 0 0 26 0 2616.3581 P49368 P49368 400 425 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.0017626 75.177 By MS/MS 5.67 0.471 1 2 3 14496000 14496000 0 10608 947 11099;11100 26342;26343;26344 21135;21136;21137;21138 21138 521 4 101200 0 NVLLLGEDGAGK SEVSTRSRSKLPAGKNVLLLGEDGAGKTSL AGKNVLLLGEDGAGKTSLIRKIQGIEEYKK K N V G K T 1 0 1 1 0 0 1 3 0 0 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1184.6401 Q9Y6G9 Q9Y6G9 69 80 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.0017903 112.94 By MS/MS 6 0.816 1 1 1 3 7828700 7828700 0 10609 2943 11101 26345;26346;26347 21139 21139 1 57436 0 NVLLLGEDGAGKTSLIR SEVSTRSRSKLPAGKNVLLLGEDGAGKTSL LLLGEDGAGKTSLIRKIQGIEEYKKGRGLE K N V I R K 1 1 1 1 0 0 1 3 0 1 4 1 0 0 0 1 1 0 0 1 0 0 17 1 1754.989 Q9Y6G9 Q9Y6G9 69 85 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 3 0.023035 69.431 By MS/MS 6 0 1 1 1641600 1641600 0 10610 2943 11102 26348 21140 21140 1 11285 0 NVLLTGATGFLGK ______________________________ GKNVLLTGATGFLGKVLLEKLLRSCPKVNS K N V G K V 1 0 1 0 0 0 0 3 0 0 3 1 0 1 0 0 2 0 0 1 0 0 13 0 1289.7343 Q8WVX9 Q8WVX9 12 24 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.00011753 171.67 By MS/MS 6 0 1 1 3636800 3636800 0 10611 2031 11103 26349 21141 21141 1 25000 0 NVLTESAR VIDHTKGQPSEGESRNVLTESARIARGKIT PSEGESRNVLTESARIARGKITDLANLSAA R N V A R I 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 888.46649 P0DPI2;A0A0B4J2D5 P0DPI2 104 111 yes no 2 0.025598 93.429 By MS/MS 8.5 0.5 1 1 2 1689100 1689100 0 10612 4 11104 26350;26351 21142 21142 1 23305 0 NVLVSEDNVAK YLEGNNFVHRDLAARNVLVSEDNVAKVSDF LAARNVLVSEDNVAKVSDFGLTKEASSTQD R N V A K V 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 11 0 1186.6194 P41240 P41240 319 329 CSK Tyrosine-protein kinase CSK yes yes 2 0.047348 71.349 By MS/MS 6.5 0.5 1 1 2 1478900 1478900 0 10613 869 11105 26352;26353 21143 21143 1 15026 0 NVMEEGKDFQPSR WPAKQYPLVTPNEERNVMEEGKDFQPSRST ERNVMEEGKDFQPSRSTAQQELDGKPASPT R N V S R S 0 1 1 1 0 1 2 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 13 1 1535.7038 P35606 P35606 834 846 COPB2 Coatomer subunit beta yes yes 2 0.00058073 171.67 By MS/MS 1.5 0.5 1 1 2 658950 658950 0 10614 826 11106 26354;26355 21144;21145 21144 2 190710 0 NVMILTNPVAAK LIAKLKSDGIPMYKRNVMILTNPVAAKKNV YKRNVMILTNPVAAKKNVSINTVTYEWAPP R N V A K K 2 0 2 0 0 0 0 0 0 1 1 1 1 0 1 0 1 0 0 2 0 0 12 0 1269.7115 Q9UGI8 Q9UGI8 90 101 TES Testin yes yes 2 0.001379 117.25 By MS/MS 7 0 1 1 481200 481200 0 10615 2720 11107 26356 21146 21146 1154 1 7553.9 0 NVNQSLLELHK ESGLNAMECALHLEKNVNQSLLELHKLATD HLEKNVNQSLLELHKLATDKNDPHLCDFIE K N V H K L 0 0 2 0 0 1 1 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1293.7041 P02794 P02794 110 120 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 3 0.010685 89.561 By MS/MS 9 0 1 1 447150 447150 0 10616 461 11108 26357 21147 21147 1 8800 0 NVNYEIPSLKK KDNTYLVELSSLLVRNVNYEIPSLKKQIAK LLVRNVNYEIPSLKKQIAKCQQLQQEYSRK R N V K K Q 0 0 2 0 0 0 1 0 0 1 1 2 0 0 1 1 0 0 1 1 0 0 11 1 1303.7136 Q96JB5 Q96JB5 121 131 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.030379 93.667 By MS/MS 5 0 1 1 1725600 1725600 0 10617 2177 11109 26358 21148 21148 1 17307 0 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1328.6321 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 419 430 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 1.3432E-37 289.22 By MS/MS By MS/MS 5.06 2.88 2 2 2 2 2 2 1 1 1 2 8 9 54370000 22536000 31834000 + 10618 55 11110 26359;26360;26361;26362;26363;26364;26365;26366;26367;26368;26369;26370;26371;26372;26373;26374;26375 21149;21150;21151;21152;21153;21154;21155;21156;21157;21158;21159;21160;21161;21162;21163;21164;21165;21166;21167 21151 19 1774500 17559000 NVQENSLEICK LTSRFRKSKPKESTKNVQENSLEICKFYLK ESTKNVQENSLEICKFYLKGNCKFGSKCRF K N V C K F 0 0 2 0 1 1 2 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1332.6344 Q6P158 Q6P158 296 306 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.003414 123.75 By MS/MS 3 0 1 1 686810 686810 0 10619 1697 11111 26376 21168 21168 0 12567 0 NVQGIIEILK PHYFWPLLVGRRKEKNVQGIIEILKGMQEL RRKEKNVQGIIEILKGMQELGVHPDQETYT K N V L K G 0 0 1 0 0 1 1 1 0 3 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1125.6758 P42704 P42704 454 463 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0001459 150.81 By MS/MS By MS/MS 4.67 1.49 2 1 1 1 1 5 1 4894200 4826800 67403 10620 886 11112 26377;26378;26379;26380;26381;26382 21169;21170;21171;21172;21173 21171 5 186110 8579.5 NVQILNMVTR LGLKETQNMAWSKPRNVQILNMVTRQGALW WSKPRNVQILNMVTRQGALWANTLGSLALL R N V T R Q 0 1 2 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 0 2 0 0 10 0 1186.6492 O14925 O14925 113 122 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 2 2.0525E-05 167.12 By MS/MS By MS/MS 9.25 0.433 3 1 3 1 13858000 13801000 57799 10621 145 11113;11114 26383;26384;26385;26386 21174;21175;21176;21177 21176 85 4 293690 131800 NVQLQENEIR IIQRLLEVRGSKPGKNVQLQENEIRGLCLK SKPGKNVQLQENEIRGLCLKSREIFLSQPI K N V I R G 0 1 2 0 0 2 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1241.6364 P36873 P36873 27 36 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes yes 2 0.0001459 150.81 By MS/MS 7.5 0.5 1 1 2 2458200 2458200 0 10622 840 11115 26387;26388 21178 21178 1 33270 0 NVQLSLLTER RVEDLVKQYFQTAEKNVQLSLLTERGMGEA QTAEKNVQLSLLTERGMGEAVQEFVDKEEK K N V E R G 0 1 1 0 0 1 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1171.6561 P49959 P49959 443 452 MRE11A Double-strand break repair protein MRE11A yes yes 2 1.6973E-07 184.71 By MS/MS By matching 4 0.816 1 1 1 2 1 1087900 1026200 61739 10623 970 11116 26389;26390;26391 21179;21180 21180 2 41660 7858.4 NVQLTENEIR IIGRLLEVQGSRPGKNVQLTENEIRGLCLK SRPGKNVQLTENEIRGLCLKSREIFLSQPI K N V I R G 0 1 2 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1214.6255 P62136 P62136 27 36 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 1.9289E-07 182.16 By MS/MS 7.5 0.5 1 1 2 4166400 4166400 0 10624 1139 11117 26392;26393 21181;21182 21182 2 58640 0 NVSTGDVNVEMNAAPGVDLTQLLNNMR AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE R N V M R S 2 1 5 2 0 1 1 2 0 0 3 0 2 0 1 1 2 0 0 4 0 0 27 0 2871.3855 CON__P13645;P13645 CON__P13645 296 322 KRT10 Keratin, type I cytoskeletal 10 yes no 3 7.2963E-19 169.51 By MS/MS By MS/MS 6.27 2.77 1 1 1 1 2 1 1 1 2 3 8 14231000 10426000 3805000 + 10625 50 11118 26394;26395;26396;26397;26398;26399;26400;26401;26402;26403;26404 21183;21184;21185;21186;21187;21188;21189;21190;21191;21192;21193;21194 21187 36;37 12 729850 3401400 NVTAIQGPGGK KIFDAAKAPIQWEERNVTAIQGPGGKWMIP WEERNVTAIQGPGGKWMIPSEAKESMDKNK R N V G K W 1 0 1 0 0 1 0 3 0 1 0 1 0 0 1 0 1 0 0 1 0 0 11 0 1040.5615 P50213 P50213 67 77 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 1.735E-05 166.34 By MS/MS 7 0 1 1 1665800 1665800 0 10626 971 11119 26405 21195 21195 1 26150 0 NVTCQDTR IKIQLANEEYKRITRNVTCQDTRHGGTLSD EYKRITRNVTCQDTRHGGTLSDLGKQVRSL R N V T R H 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 992.43454 Q8N511 Q8N511 121 128 TMEM199 Transmembrane protein 199 yes yes 2 0.0050722 125.16 By MS/MS 9 0 1 1 621720 621720 0 10627 1920 11120 26406 21196 21196 1 12235 0 NVTDEQEGFAEGFVR HITTTPTPTQFLCPKNVTDEQEGFAEGFVR NVTDEQEGFAEGFVRALAELHSQNTLPSVT K N V V R A 1 1 1 1 0 1 3 2 0 0 0 0 0 2 0 0 1 0 0 2 0 0 15 0 1696.7693 P05412 P05412 102 116 JUN Transcription factor AP-1 yes yes 2 0.000185 177.36 By MS/MS 7 0 1 1 529810 529810 0 10628 492 11121 26407 21197 21197 1 8317 0 NVTDTDILALER GAVNCPYTYMSYFLRNVTDTDILALERRLL FLRNVTDTDILALERRLLQTMDMIISKKKR R N V E R R 1 1 1 2 0 0 1 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 12 0 1358.7042 P0CG08;B7ZAQ6 P0CG08 180 191 GPR89B;GPR89A Golgi pH regulator B;Golgi pH regulator A yes no 2 1.9389E-05 177.04 By MS/MS 2 0.816 1 1 1 3 782370 782370 0 10629 31 11122 26408;26409;26410 21198;21199 21198 2 192200 0 NVTELNEPLSNEER AEQAERYDDMAAAMKNVTELNEPLSNEERN KNVTELNEPLSNEERNLLSVAYKNVVGARR K N V E R N 0 1 3 0 0 0 4 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1642.7798 P61981 P61981 29 42 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 9.9721E-24 272.92 By MS/MS 8 0 1 1 3371700 3371700 0 10630 1136 11123 26411 21200 21200 1 42568 0 NVTHIDQALQEAHR DDDKFDIYTIAFGIRNVTHIDQALQEAHRV RNVTHIDQALQEAHRVLKPGGRFLCLEFSQ R N V H R V 2 1 1 1 0 2 1 0 2 1 1 0 0 0 0 0 1 0 0 1 0 0 14 0 1630.8176 Q5HYK3 Q5HYK3 221 234 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 3 0.0064788 96.707 By MS/MS 8 0 1 1 1111000 1111000 0 10631 1602 11124 26412 21201 21201 1 14026 0 NVTICPNPEDTCDFAR GIEPLSEDAIITGFRNVTICPNPEDTCDFA VTICPNPEDTCDFARAARFVSTPFHEIMSL R N V A R A 1 1 2 2 2 0 1 0 0 1 0 0 0 1 2 0 2 0 0 1 0 0 16 0 1907.8142 O60566 O60566 598 613 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 2.0222E-11 243.37 By MS/MS 3.5 0.5 1 1 2 553350 553350 0 10632 263 11125 26413;26414 21202 21202 1 36496 0 NVTMETE FHSQLMRLMVAKEARNVTMETE________ LMVAKEARNVTMETE_______________ R N V T E - 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 2 0 0 1 0 0 7 0 822.34293 P49458 P49458 80 86 SRP9 Signal recognition particle 9 kDa protein yes yes 1 0.0068031 143.37 By MS/MS 10 0 1 1 190730 190730 0 10633 950 11126 26415 21203 21203 1 10280 0 NVTVQPDDPISFMQLTAK LEEEKLSQKKESEKRNVTVQPDDPISFMQL VQPDDPISFMQLTAKNEMNCKEDQFQLSLL R N V A K N 1 0 1 2 0 2 0 0 0 1 1 1 1 1 2 1 2 0 0 2 0 0 18 0 2003.0034 P53618 P53618 662 679 COPB1 Coatomer subunit beta yes yes 2 4.9048E-06 202.32 By MS/MS 4.5 0.5 2 2 4 4383100 4383100 0 10634 1033 11127;11128 26416;26417;26418;26419 21204;21205;21206 21204 571 3 376720 0 NVVACESIGR STREWAIKKHLYSTRNVVACESIGRVLAQR LYSTRNVVACESIGRVLAQRCLEAGINFMV R N V G R V 1 1 1 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 10 0 1103.5393 Q9H0U6 Q9H0U6 121 130 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 0.00023479 144.77 By MS/MS By matching 9 0 2 1 1 4775400 4747200 28192 10635 2417 11129 26420;26421 21207 21207 1 93425 64286 NVVAECLGK ALLLKHCECAEEGTRNVVAECLGKLTLIDP AEEGTRNVVAECLGKLTLIDPETLLPRLKG R N V G K L 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 0 988.50117 Q86VP6 Q86VP6 949 957 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.020263 88.819 By MS/MS 3.5 0.5 1 1 2 1679000 1679000 0 10636 1831 11130 26422;26423 21208 21208 1 73473 0 NVVLDALQLPK AESGATKNLLDSMARNVVLDALQLPKSWLN SMARNVVLDALQLPKSWLNGSSLLQHMKFN R N V P K S 1 0 1 1 0 1 0 0 0 0 3 1 0 0 1 0 0 0 0 2 0 0 11 0 1208.7129 Q96ME1 Q96ME1 289 299 FBXL18 F-box/LRR-repeat protein 18 yes yes 2 1.2923E-05 170.47 By MS/MS 5 0 1 1 143430 143430 0 10637 2197 11131 26424 21209 21209 1 1438.5 0 NVVLPTETEVAPAK KDVRWPTETDVSSAKNVVLPTETEVAPAKD KNVVLPTETEVAPAKDVTLLKETERASPIK K N V A K D 2 0 1 0 0 0 2 0 0 0 1 1 0 0 2 0 2 0 0 3 0 0 14 0 1466.7981 P27816 P27816 333 346 MAP4 Microtubule-associated protein 4 yes yes 2 0.013053 88.803 By MS/MS 2.5 0.5 1 1 2 567480 567480 0 10638 746 11132 26425;26426 21210 21210 1 134500 0 NVVTIFSAPNYCYR AHQLVMEGYNWCHDRNVVTIFSAPNYCYRC RNVVTIFSAPNYCYRCGNQAAIMELDDTLK R N V Y R C 1 1 2 0 1 0 0 0 0 1 0 0 0 1 1 1 1 0 2 2 0 0 14 0 1702.8137 P67775;P62714 P67775 255 268 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 6.2037E-05 208.74 By MS/MS 7.5 0.5 1 1 2 386860 386860 0 10639 1166 11133 26427;26428 21211 21211 1 5396.9 0 NVVTVDELR GQGPVMENAQGLGFRNVVTVDELRMAFPLL QGLGFRNVVTVDELRMAFPLLDMVDLERRL R N V L R M 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 3 0 0 9 0 1043.5611 Q9BXW7 Q9BXW7 153 161 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 1.0418E-07 200.86 By MS/MS 7 0 1 1 17982000 17982000 0 10640 2361 11134 26429 21212 21212 1 282290 0 NVVVVDGVR VQTKTKKTLAKPNIRNVVVVDGVRTPFLLS AKPNIRNVVVVDGVRTPFLLSGTSYKDLMP R N V V R T 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 5 0 0 9 0 955.54508 P55084 P55084 53 61 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.0090797 102.06 By MS/MS By matching 6.8 0.748 2 2 1 3 2 17075000 16981000 94147 10641 1055 11135 26430;26431;26432;26433;26434 21213;21214 21213 2 177500 116930 NVYFAQYGEPR EAWGRLRLLDFLNVKNVYFAQYGEPREGGR LNVKNVYFAQYGEPREGGRRRVVLKRLGSQ K N V P R E 1 1 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 2 1 0 0 11 0 1342.6306 Q8NDZ4 Q8NDZ4 90 100 C3orf58 Deleted in autism protein 1 yes yes 2 0.00019128 143.89 By MS/MS 7 0 1 1 815500 815500 0 10642 1957 11136 26435 21215 21215 1 12802 0 NWQYQETIK DKVNEIVETNRPDSKNWQYQETIKKGDLLL NRPDSKNWQYQETIKKGDLLLNRVQKLSRV K N W I K K 0 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 1 1 1 0 0 0 9 0 1208.5826 Q15008 Q15008 363 371 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0014985 127.68 By MS/MS 7 0 1 1 1541000 1541000 0 10643 1471 11137 26436 21216 21216 1 24191 0 NWYVDDPYQK SKLLDKMTTSFWKRRNWYVDDPYQKYHDRT FWKRRNWYVDDPYQKYHDRTNLKV______ R N W Q K Y 0 0 1 2 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 1 0 0 10 0 1326.5881 Q9NZE8 Q9NZE8 170 179 MRPL35 39S ribosomal protein L35, mitochondrial yes yes 2 0.030077 81.95 By MS/MS 10 0 1 1 443270 443270 0 10644 2648 11138 26437 21217 21217 1 23891 0 NYAHALDGLYR VRMQNDVKLPQGQRRNYAHALDGLYRVARE GQRRNYAHALDGLYRVAREEGLRRLFSGAT R N Y Y R V 2 1 1 1 0 0 0 1 1 0 2 0 0 0 0 0 0 0 2 0 0 0 11 0 1291.6309 Q9UBX3 Q9UBX3 140 150 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 0.00019571 143.5 By MS/MS 8.8 0.748 2 2 1 5 24544000 24544000 0 10645 2709 11139 26438;26439;26440;26441;26442 21218;21219;21220 21218 3 316960 0 NYCNIQVTK PNDFFPVQVSFVSKKNYCNIQVTKVTQVDG SFVSKKNYCNIQVTKVTQVDGNSPVRFSTE K N Y T K V 0 0 2 0 1 1 0 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 9 0 1138.5441 P48444 P48444 477 485 ARCN1 Coatomer subunit delta yes yes 2 6.7675E-05 168.26 By MS/MS 6 0 1 1 7706100 7706100 0 10646 934 11140 26443 21221 21221 1 52973 0 NYDIGAALDTIQYSK FSDEGGWLTRLLQTKNYDIGAALDTIQYSK NYDIGAALDTIQYSKHPPPL__________ K N Y S K H 2 0 1 2 0 1 0 1 0 2 1 1 0 0 0 1 1 0 2 0 0 0 15 0 1670.8152 Q13501 Q13501 421 435 SQSTM1 Sequestosome-1 yes yes 2 1.0325E-43 328.29 By MS/MS 6 0 1 1 1957300 1957300 0 10647 1391 11141 26444 21222 21222 1 13455 0 NYDPQKDKR RRKFLETVELQISLKNYDPQKDKRFSGTVR LQISLKNYDPQKDKRFSGTVRLKSTPRPKF K N Y K R F 0 1 1 2 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 9 2 1162.5731 P62906 P62906 40 48 RPL10A 60S ribosomal protein L10a yes yes 2 0.036052 109.66 By MS/MS 8 0 1 1 331490 331490 0 10648 1184 11142 26445 21223 21223 1 4185 0 NYEEIAK DQLVILDMKHGVEAKNYEEIAKVEKLKPLE MKHGVEAKNYEEIAKVEKLKPLEVELRRLE K N Y A K V 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 865.41815 P49755 P49755 134 140 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 0.022827 110.12 By MS/MS 9 0 1 1 2080800 2080800 0 10649 961 11143 26446 21224 21224 1 40951 0 NYEEIAKVEK DQLVILDMKHGVEAKNYEEIAKVEKLKPLE GVEAKNYEEIAKVEKLKPLEVELRRLEDLS K N Y E K L 1 0 1 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 1 1 0 0 10 1 1221.6241 P49755 P49755 134 143 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 4.288E-07 193.83 By MS/MS 9 0 1 1 4293500 4293500 0 10650 961 11144 26447 21225 21225 1 84497 0 NYIAQNAIEAAER HVRVMHANNPKYVLRNYIAQNAIEAAERGD LRNYIAQNAIEAAERGDFSEVRRVLKLLET R N Y E R G 4 1 2 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 13 0 1461.7212 Q9BVL4 Q9BVL4 598 610 SELO Selenoprotein O yes yes 2 1.1711E-07 210.95 By MS/MS 5 0 1 1 2368300 2368300 0 10651 2335 11145 26448 21226;21227 21226 2 23753 0 NYIQGINLVQAK EAKPVDKVKLIKEIKNYIQGINLVQAKKLV EIKNYIQGINLVQAKKLVESLPQEIKANVA K N Y A K K 1 0 2 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 12 0 1359.751 P52815 P52815 151 162 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 5.9134E-25 279.87 By MS/MS 9 0 1 1 7201600 7201600 0 10652 1024 11146 26449 21228 21228 1 141730 0 NYKDEQLHR NLIGTILKWPNVNLRNYKDEQLHRFVRRLL PNVNLRNYKDEQLHRFVRRLLYFYKPSSKL R N Y H R F 0 1 1 1 0 1 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 9 1 1201.584 Q6R327 Q6R327 564 572 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.011657 128.12 By MS/MS 2 0 1 1 0 0 0 10653 1724 11147 26450 21229 21229 1 0 0 NYKSEEEFIHINNK LRGEGVKLQVMANSRNYKSEEEFIHINNKL RNYKSEEEFIHINNKLRRGDIIGVQGNPGK R N Y N K L 0 0 3 0 0 0 3 0 1 2 0 2 0 1 0 1 0 0 1 0 0 0 14 1 1763.8479 Q15046 Q15046 162 175 KARS Lysine--tRNA ligase yes yes 3 0.0046962 132.06 By MS/MS 5 0 1 1 5071800 5071800 0 10654 1481 11148 26451 21230 21230 1 50868 0 NYLEGIYNVPVAAVR VQFRIPMEMTRVDLRNYLEGIYNVPVAAVR NYLEGIYNVPVAAVRTRVQHGSNKRRDHRN R N Y V R T 2 1 2 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 2 3 0 0 15 0 1676.8886 Q16540 Q16540 55 69 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 6.1529E-24 282.21 By MS/MS 9.5 0.5 1 1 2 1362600 1362600 0 10655 1550 11149 26452;26453 21231;21232;21233 21231 3 50091 0 NYLEPGKECVQPATK LPVILMDETLKFVARNYLEPGKECVQPATK NYLEPGKECVQPATKSCSFSACTDGISWPF R N Y T K S 1 0 1 0 1 1 2 1 0 0 1 2 0 0 2 0 1 0 1 1 0 0 15 1 1732.8454 P16615 P16615 989 1003 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 2.9341E-10 225.63 By MS/MS 2.78 1.31 2 2 2 2 1 9 18427000 18427000 0 10656 635 11150 26454;26455;26456;26457;26458;26459;26460;26461;26462 21234;21235;21236;21237;21238;21239;21240;21241 21237 8 3324800 0 NYLHYSLYDQAEK HDADGQATLLNLLLRNYLHYSLYDQAEKLV LRNYLHYSLYDQAEKLVSKSVFPEQANNNE R N Y E K L 1 0 1 1 0 1 1 0 1 0 2 1 0 0 0 1 0 0 3 0 0 0 13 0 1642.7627 O43242 O43242 257 269 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.0011157 120.6 By MS/MS 5.5 0.5 1 1 2 6101100 6101100 0 10657 198 11151 26463;26464 21242 21242 1 44309 0 NYLLQCTR MCRGVQHPLRGLFLRNYLLQCTRNILPDEG LRGLFLRNYLLQCTRNILPDEGEPTDEETT R N Y T R N 0 1 1 0 1 1 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 8 0 1066.523 Q96QK1 Q96QK1 151 158 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00098488 153.04 By MS/MS 5 0 1 1 2390000 2390000 0 10658 2217 11152 26465 21243 21243 1 23971 0 NYMSNPSYNYEIVNR SAEEISDAIREKMKKNYMSNPSYNYEIVNR NYMSNPSYNYEIVNRASLACGPMVKWAIAQ K N Y N R A 0 1 4 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 3 1 0 0 15 0 1862.8257 Q14204 Q14204 3370 3384 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 9.8446E-44 328.43 By MS/MS 1.5 0.5 1 1 2 867090 867090 0 10659 1433 11153 26466;26467 21244 21244 834 1 254200 0 NYNWAITR ENLEARVEAALDSRKNYNWAITREGLVVRP AALDSRKNYNWAITREGLVVRPQRRDS___ K N Y T R E 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 8 0 1036.509 Q9BYN8 Q9BYN8 186 193 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.0059985 120.87 By MS/MS 8.5 0.5 1 1 2 1154900 1154900 0 10660 2374 11154 26468;26469 21245 21245 1 16806 0 NYPDPVSIIQK LVLASDGQKMSKRKKNYPDPVSIIQKYGAD KRKKNYPDPVSIIQKYGADALRLYLINSPV K N Y Q K Y 0 0 1 1 0 1 0 0 0 2 0 1 0 0 2 1 0 0 1 1 0 0 11 0 1272.6714 P41252 P41252 607 617 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0010751 120.09 By MS/MS 3.5 0.5 1 1 2 1749000 1749000 0 10661 871 11155 26470;26471 21246 21246 1 101350 0 NYSNLLAFCR LTTQLTNDELSEKVKNYSNLLAFCRRIEQH SEKVKNYSNLLAFCRRIEQHYFEDRGKGRL K N Y C R R 1 1 2 0 1 0 0 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 10 0 1256.5972 O75431 O75431 238 247 MTX2 Metaxin-2 yes yes 2 7.1847E-05 155.84 By MS/MS 8 0 1 1 308450 308450 0 10662 327 11156 26472 21247 21247 1 3894.1 0 NYSPYYNTIDDLK IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL K N Y L K D 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 1 1 0 3 0 0 0 13 0 1604.7359 P35527;CON__P35527 P35527 200 212 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0036159 125.72 By matching By MS/MS 4.75 1.3 1 1 2 2 2 1032100 812580 219470 + 10663 822 11157 26473;26474;26475;26476 21248;21249;21250;21251 21250 4 29679 113790 NYTDEAIETDDLTIK AIGRGAKSVREFLEKNYTDEAIETDDLTIK NYTDEAIETDDLTIKLVIKALLEVVQSGGK K N Y I K L 1 0 1 3 0 0 2 0 0 2 1 1 0 0 0 0 3 0 1 0 0 0 15 0 1739.8101 O14818 O14818 175 189 PSMA7 Proteasome subunit alpha type-7 yes yes 2 2.0737E-86 402.3 By MS/MS 8 0 1 1 3052500 3052500 0 10664 140 11158 26477 21252 21252 1 38537 0 NYTDNELEK VPFGGAKAGVKINPKNYTDNELEKITRRFT VKINPKNYTDNELEKITRRFTMELAKKGFI K N Y E K I 0 0 2 1 0 0 2 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 1124.4986 P00367 P00367 192 200 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2 0.00011735 158.87 By MS/MS 6 0 1 1 834750 834750 0 10665 441 11159 26478 21253 21253 1 5738.3 0 NYVEVTR KLLPVLVHTFWIDTKNYVEVTRKWYAEAMP HTFWIDTKNYVEVTRKWYAEAMPFPLNFFL K N Y T R K 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 7 0 879.44503 Q13505 Q13505 267 273 MTX1 Metaxin-1 yes yes 2 0.017373 116.25 By MS/MS 7 0.816 1 1 1 3 6830300 6830300 0 10666 1392 11160 26479;26480;26481 21254 21254 1 52641 0 PAEPPAWAGGAR VAVGKPRAGGDAEPRPAEPPAWAGGARPGP EPRPAEPPAWAGGARPGPGVWDPNWDRREP R P A A R P 4 1 0 0 0 0 1 2 0 0 0 0 0 0 3 0 0 1 0 0 0 0 12 0 1178.5833 Q96HS1 Q96HS1 41 52 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.0070918 97.456 By MS/MS 8.5 0.5 1 1 2 3396400 3396400 0 10667 2168 11161 26482;26483 21255 21255 1 45677 0 PAGAAPRPPPKPM SREARKDRTPPPRFRPAGAAPRPPPKPM__ FRPAGAAPRPPPKPM_______________ R P A P M - 3 1 0 0 0 0 0 1 0 0 0 1 1 0 6 0 0 0 0 0 0 0 13 2 1285.6965 P62854;Q5JNZ5 P62854 103 115 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 0.051438 74.533 By MS/MS 10 0 1 1 132030 132030 0 10668 1177 11162 26484 21256 21256 681 1 7115.9 0 PAGGPKPPSGK AAVTVLRVDQIIMAKPAGGPKPPSGKKDWD IMAKPAGGPKPPSGKKDWDDDQND______ K P A G K K 1 0 0 0 0 0 0 3 0 0 0 2 0 0 4 1 0 0 0 0 0 0 11 1 991.54508 P50990 P50990 529 539 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.00049193 126.03 By MS/MS 7.33 1.49 1 2 2 2 1 1 9 13900000 13900000 0 10669 984 11163 26485;26486;26487;26488;26489;26490;26491;26492;26493 21257;21258;21259;21260;21261;21262 21257 6 111030 0 PAGVSSAVIPVLR IHVYLQCRTRSHFTRPAGVSSAVIPVLRKT TRPAGVSSAVIPVLRKTLWRQLQSRLLSTD R P A L R K 2 1 0 0 0 0 0 1 0 1 1 0 0 0 2 2 0 0 0 3 0 0 13 0 1264.7503 O60287 O60287 1287 1299 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 2 0.0051663 125.68 By MS/MS 2 0 1 1 0 0 0 10670 252 11164 26494 21263 21263 1 0 0 PALETEGLR ______________________________ ESLSARPALETEGLRFLHTTVGSLLATYGW R P A L R F 1 1 0 0 0 0 2 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 984.52401 Q9BQE4 Q9BQE4 12 20 VIMP Selenoprotein S yes yes 2 0.030245 84.498 By MS/MS 9 0 1 1 844190 844190 0 10671 2291 11165 26495 21264 21264 1 16614 0 PANFLDLGGGVK LAMATCDIIFLNGGKPANFLDLGGGVKEAQ GGKPANFLDLGGGVKEAQVYQAFKLLTADP K P A V K E 1 0 1 1 0 0 0 3 0 0 2 1 0 1 1 0 0 0 0 1 0 0 12 0 1186.6346 Q96I99 Q96I99 327 338 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.026058 82.029 By MS/MS 6.5 0.5 1 1 2 380360 380360 0 10672 2172 11166 26496;26497 21265 21265 1 3418.8 0 PAPVAQPPAAAPPSAVGSSAAAPR APPASRAPQMRAAPRPAPVAQPPAAAPPSA AAPPSAVGSSAAAPRQPGLMAQMATTAAGV R P A P R Q 9 1 0 0 0 1 0 1 0 0 0 0 0 0 7 3 0 0 0 2 0 0 24 0 2137.128 Q9Y6H1;Q5T1J5 Q9Y6H1 28 51 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial yes no 3 0.0030789 80.016 By MS/MS 9 0 1 1 876010 876010 0 10673 1629 11167 26498 21266 21266 1 17240 0 PASGCEAETQTEELK NVCGTMPVCGTILGKPASGCEAETQTEELK PASGCEAETQTEELKNWKPARPVGIEKSLQ K P A L K N 2 0 0 0 1 1 4 1 0 0 1 1 0 0 1 1 2 0 0 0 0 0 15 0 1648.725 P11717 P11717 983 997 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 8.0613E-33 301.35 By MS/MS 2 0.816 1 1 1 3 336680 336680 0 10674 583 11168 26499;26500;26501 21267;21268;21269 21269 3 79417 0 PASGPIRPIVR RRKARQAKARRIAPRPASGPIRPIVRCPTV IAPRPASGPIRPIVRCPTVRYHTKVRAGRG R P A V R C 1 2 0 0 0 0 0 1 0 2 0 0 0 0 3 1 0 0 0 1 0 0 11 1 1161.6982 P26373 P26373 50 60 RPL13 60S ribosomal protein L13 yes yes 3 0.04933 63.426 By MS/MS 8.5 0.5 1 1 2 8958900 8958900 0 10675 731 11169 26502;26503 21270 21270 1 114030 0 PATAAAAAAGSR AGIAGEAQSKKPVSRPATAAAAAAGSREPR VSRPATAAAAAAGSREPRVKQGPKIYSFNS R P A S R E 7 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 12 0 1013.5254 Q7Z478 Q7Z478 45 56 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 0.04476 72.096 By MS/MS 9 0 1 1 249970 249970 0 10676 1791 11170 26504 21271 21271 1 4919.4 0 PATPEIQEIVDK ______________________________ EAKPATPEIQEIVDKVKPQLEEKTNETYGK K P A D K V 1 0 0 1 0 1 2 0 0 2 0 1 0 0 2 0 1 0 0 1 0 0 12 0 1338.7031 P01040 P01040 11 22 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 0.021786 81.625 By MS/MS By matching 10 0 2 1 1 520090 431680 88412 10677 449 11171 26505;26506 21272 21272 1 23266 113190 PATSTLNR GSGAKPSDAASEAARPATSTLNRFSALQQA AASEAARPATSTLNRFSALQQAVPTESTDN R P A N R F 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 2 0 0 0 0 0 8 0 858.45593 Q04637 Q04637 1115 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.029286 90.37 By MS/MS 1.5 0.5 1 1 2 10168000 10168000 0 10678 1291 11172 26507;26508 21273 21273 1 3400000 0 PAVLSGYFK PVVHETEPESGSQPRPAVLSGYFKQFQKSL SGSQPRPAVLSGYFKQFQKSLPPRFQRQQE R P A F K Q 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 1 1 0 0 9 0 980.53312 Q9Y520 Q9Y520 657 665 PRRC2C Protein PRRC2C yes yes 2 0.055878 82.241 By MS/MS 2 0 1 1 0 0 0 10679 2905 11173 26509 21274 21274 1 0 0 PAYFQRPENALK ______________________________ ______________________________ M P A L K R 2 1 1 0 0 1 1 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 12 1 1432.7463 Q14152 Q14152 2 13 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00025899 166.69 By MS/MS 3 0 1 1 3547100 3547100 0 10680 1422 11174 26510 21275 21275 1 64903 0 PDMREEELEDIK VEELFNLMQLFIAQRPDMREEELEDIKQFK AQRPDMREEELEDIKQFKKTTISCYLRCLD R P D I K Q 0 1 0 2 0 0 4 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 12 1 1502.6923 Q70CQ2 Q70CQ2 2911 2922 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 4 0.03945 54.259 By MS/MS 2 0 1 1 105230 105230 0 10681 1749 11175 26511 21276 21276 923 0 35593 0 PDSNIYK PRTSLPHFHHPETSRPDSNIYKKPPIYKQR FHHPETSRPDSNIYKKPPIYKQRESVGGSP R P D Y K K 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 7 0 835.40758 Q08495 Q08495 136 142 DMTN Dematin yes yes 2 0.041861 95.793 By MS/MS 8 0 1 1 1051400 1051400 0 10682 1310 11176 26512 21277 21277 1 13274 0 PEFLEDPSVLTK ______________________________ ______________________________ M P E T K D 0 0 0 1 0 0 2 0 0 0 2 1 0 1 2 1 1 0 0 1 0 0 12 0 1373.7078 P42166;P42167 P42166 2 13 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 5.1866E-05 166.86 By MS/MS 6 0.816 1 1 1 3 9238200 9238200 0 10683 875;876 11177 26513;26514;26515 21278;21279;21280;21281 21278 4 74012 0 PEFLEDPSVLTKDK ______________________________ MPEFLEDPSVLTKDKLKSELVANNVTLPAG M P E D K L 0 0 0 2 0 0 2 0 0 0 2 2 0 1 2 1 1 0 0 1 0 0 14 1 1616.8298 P42166;P42167 P42166 2 15 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 0.00060178 126.09 By MS/MS 5.5 0.5 1 1 2 2855900 2855900 0 10684 875;876 11178 26516;26517 21282;21283 21283 1 21380 0 PELAVQK ______________________________ ______________________________ M P E Q K V 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 7 0 783.44905 P51665 P51665 2 8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 0.011278 132.09 By MS/MS 6.5 0.5 1 1 2 3901100 3901100 0 10685 1005 11179 26518;26519 21284 21284 1 58499 0 PENVAPR ______________________________ ______________________________ M P E P R S 1 1 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 7 0 781.40825 P50991 P50991 2 8 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0080496 143.11 By MS/MS By matching 5.17 2.27 1 1 1 1 1 1 4 2 46805000 46775000 29923 10686 985 11180 26520;26521;26522;26523;26524;26525 21285 21285 1 342560 42393 PFLDLSHPR AKYLATVVGYLVVSRPFLDLSHPRHLKSTH YLVVSRPFLDLSHPRHLKSTHSELLEDYYQ R P F P R H 0 1 0 1 0 0 0 0 1 0 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1080.5716 P28288 P28288 336 344 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 3 9.705E-05 159.58 By MS/MS 5 0 1 1 949960 949960 0 10687 752 11181 26526 21286 21286 1 9527.6 0 PFQEYLEAQR AFIGAVPGIGPSLQKPFQEYLEAQRQKLHH PSLQKPFQEYLEAQRQKLHHKSEMGTPQGE K P F Q R Q 1 1 0 0 0 2 2 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1279.6197 Q96GC9 Q96GC9 337 346 VMP1 Vacuole membrane protein 1 yes yes 2 0.0040024 107.83 By MS/MS 1.5 0.5 1 1 2 130430 130430 0 10688 2159 11182 26527;26528 21287 21287 1 36621 0 PFSNSHNALK ______________________________ ______________________________ M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 P12277 P12277 2 11 CKB Creatine kinase B-type yes yes 2;3 0.0081543 112.36 By MS/MS 7 0 2 2 1275400 1275400 0 10689 592 11183 26529;26530 21288;21289 21288 2 20022 0 PGASDLTGSFR IISRGANFLTQILLRPGASDLTGSFRLYRK ILLRPGASDLTGSFRLYRKEVLEKLIEKCV R P G F R L 1 1 0 1 0 0 0 2 0 0 1 0 0 1 1 2 1 0 0 0 0 0 11 0 1106.5356 O60762 O60762 178 188 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.00010068 151.83 By MS/MS 8 0 1 1 814270 814270 0 10690 275 11184 26531 21290 21290 1 10280 0 PGFSIADK SIGIYGLDFYVVLGRPGFSIADKKRRTGCI FYVVLGRPGFSIADKKRRTGCIGAKHRISK R P G D K K 1 0 0 1 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 8 0 833.42832 P62913 P62913 137 144 RPL11 60S ribosomal protein L11 yes yes 2 0.0038052 131.03 By MS/MS 9 0 1 1 802240 802240 0 10691 1186 11185 26532 21291 21291 1 15788 0 PGGSLDNSEQK LQRMTDKCFRKCIGKPGGSLDNSEQKCIAM CIGKPGGSLDNSEQKCIAMCMDRYMDAWNT K P G Q K C 0 0 1 1 0 1 1 2 0 0 1 1 0 0 1 2 0 0 0 0 0 0 11 0 1130.5204 Q9Y5L4 Q9Y5L4 54 64 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 0.00089159 123.75 By MS/MS 10 0 1 1 116780 116780 0 10692 2916 11186 26533 21292 21292 1 6293.8 0 PGHLQEGFGCVVTNR ______________________________ PGHLQEGFGCVVTNRFDQLFDDESDPFEVL M P G N R F 0 1 1 0 1 1 1 3 1 0 1 0 0 1 1 0 1 0 0 2 0 0 15 0 1669.7995 Q8NC51 Q8NC51 2 16 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.00025239 185.2 By MS/MS 6 0 2 2 10702000 10702000 0 10693 1946 11187 26534;26535 21293;21294 21294 2 73568 0 PGIGATHSSR LGEFSITYKPVKHGRPGIGATHSSRFIPLK VKHGRPGIGATHSSRFIPLK__________ R P G S R F 1 1 0 0 0 0 0 2 1 1 0 0 0 0 1 2 1 0 0 0 0 0 10 0 981.49919 P62841 P62841 131 140 RPS15 40S ribosomal protein S15 yes yes 2;3 0.0012002 131.5 By MS/MS By matching 9.4 0.49 3 2 4 1 11180000 11148000 31391 10694 1174 11188 26536;26537;26538;26539;26540 21295;21296;21297;21298 21297 4 290470 71581 PGIVELPTLEELK ______________________________ ______________________________ M P G L K V 0 0 0 0 0 0 3 1 0 1 3 1 0 0 2 0 1 0 0 1 0 0 13 0 1436.8126 P51970 P51970 2 14 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 0.001573 115.78 By MS/MS 9 0 1 1 81264 81264 0 10695 1010 11189 26541 21299;21300 21299 2 1599.3 0 PGIVELPTLEELKVDEVK ______________________________ VELPTLEELKVDEVKISSAVLKAAAHHYGA M P G V K I 0 0 0 1 0 0 4 1 0 1 3 2 0 0 2 0 1 0 0 3 0 0 18 1 2007.114 P51970 P51970 2 19 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 3 9.6248E-05 134.81 By MS/MS 9 0 1 1 158140 158140 0 10696 1010 11190 26542 21301;21302;21303 21303 3 3112.2 0 PGLVVVHAEDGTTSK FGILAAHVPTLQVLRPGLVVVHAEDGTTSK PGLVVVHAEDGTTSKYFVSSGSIAVNADSS R P G S K Y 1 0 0 1 0 0 1 2 1 0 1 1 0 0 1 1 2 0 0 3 0 0 15 0 1508.7835 P30049 P30049 82 96 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 0.00084401 126.34 By MS/MS 10 0 1 1 125320 125320 0 10697 765 11191 26543 21304 21304 1 6754.1 0 PGPGVWDPNWDR EPRPAEPPAWAGGARPGPGVWDPNWDRREP GARPGPGVWDPNWDRREPLSLINVRKRNVE R P G D R R 0 1 1 2 0 0 0 2 0 0 0 0 0 0 3 0 0 2 0 1 0 0 12 0 1394.6367 Q96HS1 Q96HS1 53 64 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.02579 82.171 By MS/MS 8 0 1 1 1113600 1113600 0 10698 2168 11192 26544 21305 21305 1 14059 0 PGPTPSGTNVGSSGR ______________________________ PGPTPSGTNVGSSGRSPSKAVAARAAGSTV M P G G R S 0 1 1 0 0 0 0 4 0 0 0 0 0 0 3 3 2 0 0 1 0 0 15 0 1369.6586 P60468 P60468 2 16 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.00013424 179.59 By MS/MS By matching 10 0 2 1 1 6745600 6682600 62960 10699 1091 11193 26545;26546 21306 21306 1 360170 80607 PGSIDSNNQLFAPGGR GSRPIDTSRLTKITKPGSIDSNNQLFAPGG GSIDSNNQLFAPGGRLSWGKGSSGGSGAKP K P G G R L 1 1 2 1 0 1 0 3 0 1 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1628.7907 Q04637 Q04637 1075 1090 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 8.0328E-24 272.59 By MS/MS 2 0 1 1 669510 669510 0 10700 1291 11194 26547 21307 21307 1 226460 0 PGSIKPHQK GLKREDLRRGLVMVKPGSIKPHQKVEAQVY GLVMVKPGSIKPHQKVEAQVYILSKEEGGR K P G Q K V 0 0 0 0 0 1 0 1 1 1 0 2 0 0 2 1 0 0 0 0 0 0 9 1 990.56106 P49411 P49411 343 351 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.011803 116.37 By MS/MS 7.5 0.5 1 1 2 1124400 1124400 0 10701 949 11195 26548;26549 21308;21309 21308 2 17377 0 PGVAAPPEVAPAPK HEEEKTPEVPPAQPKPGVAAPPEVAPAPKS KPGVAAPPEVAPAPKSWASNKQGGQGDGIQ K P G P K S 4 0 0 0 0 0 1 1 0 0 0 1 0 0 5 0 0 0 0 2 0 0 14 0 1299.7187 Q9Y520 Q9Y520 106 119 PRRC2C Protein PRRC2C yes yes 2 0.017032 86.344 By MS/MS 1.5 0.5 1 1 2 277910 277910 0 10702 2905 11196 26550;26551 21310 21310 1 81554 0 PGVAQPEDTVQFR QLRVFRTNFFIQLVRPGVAQPEDTVQFRIP VRPGVAQPEDTVQFRIPMEMTRVDLRNYLE R P G F R I 1 1 0 1 0 2 1 1 0 0 0 0 0 1 2 0 1 0 0 2 0 0 13 0 1442.7154 Q16540 Q16540 31 43 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 0.008379 93.561 By MS/MS 9.5 0.5 1 1 2 1185500 1185500 0 10703 1550 11197 26552;26553 21311;21312 21311 2 41298 0 PGVTVKDVNQQEFVR ______________________________ PGVTVKDVNQQEFVRALAAFLKKSGKLKVP M P G V R A 0 1 1 1 0 2 1 1 0 0 0 1 0 1 1 0 1 0 0 4 0 0 15 1 1714.9002 P39019 P39019 2 16 RPS19 40S ribosomal protein S19 yes yes 2;3 1.2835E-16 231.74 By MS/MS 9.67 0.471 1 2 3 40731000 40731000 0 10704 853 11198 26554;26555;26556 21313;21314 21313 2 2168900 0 PHASIMFCTVGVLLR KSCGYSVRFESILPRPHASIMFCTVGVLLR PHASIMFCTVGVLLRKLEAGIRGISHVIVD R P H L R K 1 1 0 0 1 0 0 1 1 1 2 0 1 1 1 1 1 0 0 2 0 0 15 0 1699.8902 Q08211 Q08211 482 496 DHX9 ATP-dependent RNA helicase A yes yes 2 0.040347 69.349 By MS/MS 6 0 1 1 3612100 3612100 0 10705 1307 11199 26557 21315 21315 779 1 24831 0 PHVNVGTIGHVDHGK RGLAVEAKKTYVRDKPHVNVGTIGHVDHGK PHVNVGTIGHVDHGKTTLTAAITKILAEGG K P H G K T 0 0 1 1 0 0 0 3 3 1 0 1 0 0 1 0 1 0 0 3 0 0 15 0 1565.8063 P49411 P49411 56 70 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.048921 65.495 By MS/MS 1 0 1 1 189420 189420 0 10706 949 11200 26558 21316 21316 1 45645 0 PIIFDCR VVGEGTHFLIPWVQKPIIFDCRSRPRNVPV FLIPWVQKPIIFDCRSRPRNVPVITGSKDL K P I C R S 0 1 0 1 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 7 0 919.45857 P35232 P35232 64 70 PHB Prohibitin yes yes 2 0.039458 97.602 By MS/MS 8 0 1 1 747760 747760 0 10707 814 11201 26559 21317 21317 1 9440.4 0 PKTSDIFEADIANDVKSK EFKAKHRIAHKPHSKPKTSDIFEADIANDV SDIFEADIANDVKSKDLLADKELWARLEEL K P K S K D 2 0 1 3 0 0 1 0 0 2 0 3 0 1 1 2 1 0 0 1 0 0 18 2 1977.0055 O94763 O94763 185 202 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 6 0.053393 25.167 By MS/MS 7 0 1 1 110680 110680 0 10708 363 11202 26560 21318 21318 0 1737.4 0 PLAKDLLHPSPEEEK ______________________________ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSY M P L E K R 1 0 0 1 0 0 3 0 1 0 3 2 0 0 3 1 0 0 0 0 0 0 15 1 1701.8938 P42677 P42677 2 16 RPS27 40S ribosomal protein S27 yes yes 3;4 0.0016834 110.15 By MS/MS 10 0 2 2 1789300 1789300 0 10709 882 11203 26561;26562 21319;21320 21319 2 96436 0 PLELSDFR ISASCRRPIKGAAGRPLELSDFRMEESFSS IKGAAGRPLELSDFRMEESFSSKYVPKYVP R P L F R M 0 1 0 1 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 8 0 975.50255 P42167 P42167 374 381 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.038568 86.833 By MS/MS 6.5 0.5 1 1 2 2254300 2254300 0 10710 876 11204 26563;26564 21321 21321 1 17137 0 PLEMIEPR AHCKRGNGLIKVNGRPLEMIEPRTLQYKLL LIKVNGRPLEMIEPRTLQYKLLEPVLLLGK R P L P R T 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 8 0 983.511 P62249 P62249 38 45 RPS16 40S ribosomal protein S16 yes yes 2 0.0062484 118.74 By MS/MS 10 0 1 1 1526600 1526600 0 10711 1145 11205 26565 21322 21322 648 1 82278 0 PLENLEEEGLPK ______________________________ ______________________________ M P L P K N 0 0 1 0 0 0 4 1 0 0 3 1 0 0 2 0 0 0 0 0 0 0 12 0 1366.698 Q15008 Q15008 2 13 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 6.1823E-06 183.99 By MS/MS 7 0 1 1 822720 822720 0 10712 1471 11206 26566 21323 21323 1 12915 0 PLENLEEEGLPKNPDLR ______________________________ ENLEEEGLPKNPDLRIAQLRFLLSLPEHRG M P L L R I 0 1 2 1 0 0 4 1 0 0 4 1 0 0 3 0 0 0 0 0 0 0 17 1 1962.0058 Q15008 Q15008 2 18 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 3 0.0001776 140.77 By MS/MS 7 0 1 1 12047000 12047000 0 10713 1471 11207 26567 21324 21324 1 189110 0 PLFLAPDFDR KVSQWWERLTKQEKRPLFLAPDFDRWLDES KQEKRPLFLAPDFDRWLDESDAEMELRAKE R P L D R W 1 1 0 2 0 0 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 0 10 0 1189.6132 Q9P035 Q9P035 100 109 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.01001 94.309 By MS/MS 1 0 1 1 65105 65105 0 10714 2661 11208 26568 21325;21326 21326 2 15688 0 PLFTANPFEQDVEK ______________________________ MPLFTANPFEQDVEKATNEYNTTEDWSLIM M P L E K A 1 0 1 1 0 1 2 0 0 0 1 1 0 2 2 0 1 0 0 1 0 0 14 0 1633.7988 O75886 O75886 2 15 STAM2 Signal transducing adapter molecule 2 yes yes 2 4.4657E-07 203.39 By MS/MS 5 0 1 1 464880 464880 0 10715 352 11209 26569 21327 21327 1 4662.5 0 PLLLPAAPK KKKIQVNSKPSIQPKPLLLPAAPKTQTNSS PSIQPKPLLLPAAPKTQTNSSVPAKTIIIQ K P L P K T 2 0 0 0 0 0 0 0 0 0 3 1 0 0 3 0 0 0 0 0 0 0 9 0 918.59024 P18850 P18850 183 191 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.011922 97.071 By MS/MS 4 0 1 1 796500 796500 0 10716 656 11210 26570 21328 21328 1 74956 0 PLLLQLPIGEAK FKYAVESIREKLKAKPLLLQLPIGEAKTFK KAKPLLLQLPIGEAKTFKGVVDVVMKEKLL K P L A K T 1 0 0 0 0 1 1 1 0 1 4 1 0 0 2 0 0 0 0 0 0 0 12 0 1290.7911 Q969S9 Q969S9 219 230 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.00030709 143.5 By MS/MS 4.5 0.5 1 1 2 84611 84611 0 10717 2095 11211 26571;26572 21329;21330;21331 21331 3 4048 0 PLSDFILALK ______________________________ ______________________________ M P L L K D 1 0 0 1 0 0 0 0 0 1 3 1 0 1 1 1 0 0 0 0 0 0 10 0 1115.659 Q9Y276 Q9Y276 2 11 BCS1L Mitochondrial chaperone BCS1 yes yes 2 0.039672 77.318 By MS/MS 7 0 1 1 27807 27807 0 10718 2817 11212 26573 21332 21332 1 436.52 0 PLVALLDGR LGVRPPIMNGPLHPRPLVALLDGRDCTVEM GPLHPRPLVALLDGRDCTVEMPILKDVATV R P L G R D 1 1 0 1 0 0 0 1 0 0 3 0 0 0 1 0 0 0 0 1 0 0 9 0 952.57057 P56545;Q13363 Q13363 28 36 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 2 0.002505 114.89 By MS/MS 7 0 1 1 434790 434790 0 10719 1374;1073 11213 26574 21333 21333 1 6825.5 0 PLVETIFER DDSAPNEMVYRFTARPLVETIFERGMATCF YRFTARPLVETIFERGMATCFAYGQTGSGK R P L E R G 0 1 0 0 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 9 0 1102.6023 O00139 O00139 296 304 KIF2A Kinesin-like protein KIF2A yes yes 2 0.00070687 140.35 By MS/MS 4.5 0.5 1 1 2 446130 446130 0 10720 82 11214 26575;26576 21334 21334 1 30308 0 PLVPEVSIK GTEPSSLPFLDPNARPLVPEVSIKTPRVFN LDPNARPLVPEVSIKTPRVFNTGGAPRILA R P L I K T 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 0 0 0 2 0 0 9 0 980.59063 P27708 P27708 157 165 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.012679 95.741 By MS/MS 1.5 0.5 1 1 2 200030 200030 0 10721 745 11215 26577;26578 21335 21335 1 61652 0 PMFIVNTNVPR ______________________________ ______________________________ M P M P R A 0 1 2 0 0 0 0 0 0 1 0 0 1 1 2 0 1 0 0 2 0 0 11 0 1286.6805 P14174 P14174 2 12 MIF Macrophage migration inhibitory factor yes yes 2 0.00013392 148.91 By MS/MS 10 0 2 2 2604300 2604300 0 10722 611 11216;11217 26579;26580 21336;21337 21337 291 2 140360 0 PNAQELPSMYQR KDLQMVNISLRVLSRPNAQELPSMYQRLGL LSRPNAQELPSMYQRLGLDYEERVLPSIVN R P N Q R L 1 1 1 0 0 2 1 0 0 0 1 0 1 0 2 1 0 0 1 0 0 0 12 0 1432.6769 Q99623 Q99623 112 123 PHB2 Prohibitin-2 yes yes 2 0.054413 69.346 By MS/MS 7 0 1 1 222610 222610 0 10723 2254 11218 26581 21338 21338 0 3494.6 0 PNTSVQFLR QCPAAIVGGINVLLKPNTSVQFLRLGMLSP INVLLKPNTSVQFLRLGMLSPEGTCKAFDT K P N L R L 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 9 0 1060.5665 P49327 P49327 194 202 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00038098 150.36 By MS/MS 2 0 1 1 308870 308870 0 10724 946 11219 26582 21339 21339 1 104470 0 PPYTVVYFPVR ______________________________ ______________________________ M P P V R G 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 1 0 2 3 0 0 11 0 1336.718 P09211 P09211 2 12 GSTP1 Glutathione S-transferase P yes yes 2 4.3731E-09 207.29 By MS/MS 8.5 0.5 1 1 2 720470 720470 0 10725 534 11220 26583;26584 21340;21341 21340 2 10656 0 PQAPATVGLAFR GKTLGECGFTSQTARPQAPATVGLAFRADD TARPQAPATVGLAFRADDTFEALCIEPFSS R P Q F R A 3 1 0 0 0 1 0 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 12 0 1226.6772 Q15370 Q15370 69 80 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.00017613 152.04 By MS/MS 10 0 1 1 728470 728470 0 10726 1503 11221 26585 21342 21342 1 39262 0 PQDALEGVVLSPSLEAR ALRHPIQVSRRLLSRPQDALEGVVLSPSLE DALEGVVLSPSLEARVRDIAIATRNTKKNR R P Q A R V 2 1 0 1 0 1 2 1 0 0 3 0 0 0 2 2 0 0 0 2 0 0 17 0 1779.9367 Q9NVI7 Q9NVI7 359 375 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.0060825 124.5 By MS/MS 5 0 1 1 1079300 1079300 0 10727 2598 11222 26586 21343 21343 1 10825 0 PQDVLEGVVLSPSLEAR ALRHPIQVSRRLLSRPQDVLEGVVLSPSLE DVLEGVVLSPSLEARVRDIAIATRNTKKNR R P Q A R V 1 1 0 1 0 1 2 1 0 0 3 0 0 0 2 2 0 0 0 3 0 0 17 0 1807.968 Q5T9A4;Q5T2N8 Q5T9A4 311 327 ATAD3B;ATAD3C ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 2 0.0048681 99.796 By MS/MS 5 0 1 1 262870 262870 0 10728 1638 11223 26587 21344 21344 1 2636.5 0 PRPDPSPEIEGDLQPATHGSR VKTDRPLPENPYHSRPRPDPSPEIEGDLQP PEIEGDLQPATHGSRFYFWTK_________ R P R S R F 1 2 0 2 0 1 2 2 1 1 1 0 0 0 5 2 1 0 0 0 0 0 21 1 2255.0931 P51970 P51970 146 166 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 3;4 9.5375E-06 167.97 By MS/MS 9 0 2 2 2405700 2405700 0 10729 1010 11224 26588;26589 21345;21346 21345 1 47345 0 PRPPTLLSQEQIK LQKNNKDRFCQLLWRPRPPTLLSQEQIKQI WRPRPPTLLSQEQIKQIKKDLKKYSKIFEQ R P R I K Q 0 1 0 0 0 2 1 0 0 1 2 1 0 0 3 1 1 0 0 0 0 0 13 1 1505.8566 P55884 P55884 706 718 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.00011887 164.13 By MS/MS 5.71 1.67 2 2 1 1 1 7 14645000 14645000 0 10730 1065 11225 26590;26591;26592;26593;26594;26595;26596 21347;21348;21349;21350 21347 4 994440 0 PSAIQQR SESLLRGIYAYGFEKPSAIQQRAILPCIKG IYAYGFEKPSAIQQRAILPCIKGYDVIAQA K P S Q R A 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 7 0 798.4348 P60842;Q14240;P38919 P60842 55 61 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.0092414 138.24 By MS/MS 3.57 2.06 1 2 1 1 1 1 7 7038900 7038900 0 10731 1097;851 11226 26597;26598;26599;26600;26601;26602;26603 21351;21352;21353;21354 21351 4 131220 0 PSDAASEAARPATSTLNR RLSWGKGSSGGSGAKPSDAASEAARPATST AASEAARPATSTLNRFSALQQAVPTESTDN K P S N R F 5 2 1 1 0 0 1 0 0 0 1 0 0 0 2 3 2 0 0 0 0 0 18 1 1813.8919 Q04637 Q04637 1105 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00078725 111.72 By MS/MS By matching 2 0 3 2 1 8382800 8351400 31415 10732 1291 11227 26604;26605;26606 21355;21356 21356 2 2824800 44427 PSENLGQVLFGER EYTAFDFCQASEGKRPSENLGQVLFGERIE KRPSENLGQVLFGERIEPSPYKFTFNKKET R P S E R I 0 1 1 0 0 1 2 2 0 0 2 0 0 1 1 1 0 0 0 1 0 0 13 0 1444.731 Q99805 Q99805 92 104 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 2 0.00024225 158.3 By MS/MS 1.5 0.5 1 1 2 244430 244430 0 10733 2269 11228 26607;26608 21357;21358;21359 21359 3 70574 0 PSKGPLQSVQVFGR ______________________________ MPSKGPLQSVQVFGRKKTATAVAHCKRGNG M P S G R K 0 1 0 0 0 2 0 2 0 0 1 1 0 1 2 2 0 0 0 2 0 0 14 1 1498.8256 P62249 P62249 2 15 RPS16 40S ribosomal protein S16 yes yes 2;3 0.00065703 139.78 By MS/MS 10 0 2 2 5408900 5408900 0 10734 1145 11229 26609;26610 21360;21361;21362 21361 3 291520 0 PSQDTEKPLEPVSTVQVEPAVK AEKFPSTETATLAQKPSQDTEKPLEPVSTV PLEPVSTVQVEPAVKTVNQQTMAAPVVKEE K P S V K T 1 0 0 1 0 2 3 0 0 0 1 2 0 0 4 2 2 0 0 4 0 0 22 1 2377.2377 Q9Y520 Q9Y520 1099 1120 PRRC2C Protein PRRC2C yes yes 3 6.1881E-06 162.39 By MS/MS 1.5 0.5 1 1 2 677940 677940 0 10735 2905 11230 26611;26612 21363 21363 1 197370 0 PSQVVAETR HWQILPGDPFDNSSRPSQVVAETRKRKGLK FDNSSRPSQVVAETRKRKGLKEGIPALDNF R P S T R K 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 9 0 985.51926 P13639 P13639 831 839 EEF2 Elongation factor 2 yes yes 2 0.0099823 100.88 By MS/MS 7.17 2.11 1 1 1 1 1 1 6 1753800 1753800 0 10736 602 11231 26613;26614;26615;26616;26617;26618 21364;21365;21366;21367 21365 4 21695 0 PSSSPVIFAGGQDR SQSPPKGVTIPYRPKPSSSPVIFAGGQDRY KPSSSPVIFAGGQDRYSTGSDSASFPHTTP K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 Q15366 Q15366 186 199 PCBP2 Poly(rC)-binding protein 2 yes yes 2 0.00044126 171.49 By MS/MS 7 0 1 1 2915300 2915300 0 10737 1501 11232 26619 21368 21368 1 45765 0 PTDGAASELSSIQNLNR LVESDKEEQPDFLPRPTDGAASELSSIQNL DGAASELSSIQNLNRALRETLLAQPAAGQA R P T N R A 2 1 2 1 0 1 1 1 0 1 2 0 0 0 1 3 1 0 0 0 0 0 17 0 1771.8701 Q9NU22 Q9NU22 4004 4020 MDN1 Midasin yes yes 2 5.869E-17 262.48 By MS/MS 1 0 1 1 98674 98674 0 10738 2580 11233 26620 21369 21369 1 23777 0 PTDNILIPQLIR ASEFDPQYNKDATSRPTDNILIPQLIREIG TSRPTDNILIPQLIREIGSINLKKNEPPLT R P T I R E 0 1 1 1 0 1 0 0 0 3 2 0 0 0 2 0 1 0 0 0 0 0 12 0 1391.8136 Q9UGP8 Q9UGP8 268 279 SEC63 Translocation protein SEC63 homolog yes yes 2 0.045773 87.568 By MS/MS 4 0 1 1 120560 120560 0 10739 2724 11234 26621 21370 21370 1 11346 0 PTYTNLNR EAIYDICRRNLDIERPTYTNLNRLISQIVS RNLDIERPTYTNLNRLISQIVSSITASLRF R P T N R L 0 1 2 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 1 0 0 0 8 0 977.49304 P68363;Q9H853;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 222 229 TUBA1B;TUBA4B;TUBA4A;TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2 0.0005154 157.58 By MS/MS By matching 6 0 2 1 1 2755100 2712700 42429 10740 1210;1751;2290;1211 11235 26622;26623 21371 21371 1 18648 43478 PVAFLAYR PPSVGSMTDEHGHQRPVAFLAYRVNGQYIM DEHGHQRPVAFLAYRVNGQYIMEGLASSFL R P V Y R V 2 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 8 0 935.52289 Q9NRP0 Q9NRP0 71 78 OSTC Oligosaccharyltransferase complex subunit OSTC yes yes 2 0.01359 106.76 By MS/MS 10 0 1 1 2652600 2652600 0 10741 2557 11236 26624 21372 21372 1 142970 0 PVASQLPR KDLQNVNITLRILFRPVASQLPRIFTSIGE TLRILFRPVASQLPRIFTSIGEDYDERVLP R P V P R I 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 8 0 866.4974 P35232 P35232 98 105 PHB Prohibitin yes yes 2 0.03195 89.355 By MS/MS 8 0 1 1 2435000 2435000 0 10742 814 11237 26625 21373 21373 1 30741 0 PVIDNPNYK NPRCESAPGCGVWQRPVIDNPNYKGKWKPP CGVWQRPVIDNPNYKGKWKPPMIDNPSYQG R P V Y K G 0 0 2 1 0 0 0 0 0 1 0 1 0 0 2 0 0 0 1 1 0 0 9 0 1058.5397 P27824 P27824 372 380 CANX Calnexin yes yes 2 0.047965 76.827 By MS/MS 4 0 1 1 579540 579540 0 10743 747 11238 26626 21374 21374 1 54538 0 PVISPLELR LQAVQTNELAFDNAKPVISPLELRMEELRH AFDNAKPVISPLELRMEELRHHFRIEFAVA K P V L R M 0 1 0 0 0 0 1 0 0 1 2 0 0 0 2 1 0 0 0 1 0 0 9 0 1022.6124 Q16513 Q16513 210 218 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.035371 82.279 By MS/MS 3 0 1 1 54150 54150 0 10744 1547 11239 26627 21375 21375 1 990.79 0 PVIVEPLEQLDDEDGLPEK ERCSEGVFLLTTTPRPVIVEPLEQLDDEDG EPLEQLDDEDGLPEKLAQKNPMYQKERETP R P V E K L 0 0 0 3 0 1 4 1 0 1 3 1 0 0 3 0 0 0 0 2 0 0 19 0 2134.0681 P23246 P23246 444 462 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 6.0139E-05 160.79 By MS/MS 4 0 1 1 186390 186390 0 10745 700 11240 26628 21376;21377 21376 2 17541 0 PVLLQVAESAYR LAEAQRQKASGDSARPVLLQVAESAYRFGL SARPVLLQVAESAYRFGLGSVAGAVGATAV R P V Y R F 2 1 0 0 0 1 1 0 0 0 2 0 0 0 1 1 0 0 1 2 0 0 12 0 1344.7402 Q9UJS0 Q9UJS0 320 331 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 5.1062E-05 167.12 By MS/MS 5 0 1 1 1034800 1034800 0 10746 2748 11241 26629 21378 21378 1 10378 0 PYQYPALTPEQK ______________________________ ______________________________ M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 P04075 P04075 2 13 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.00027711 145.46 By MS/MS 7 0 1 1 1220100 1220100 0 10747 467 11242 26630 21379 21379 1 19153 0 PYQYPALTPEQKK ______________________________ ______________________________ M P Y K K E 1 0 0 0 0 2 1 0 0 0 1 2 0 0 3 0 1 0 2 0 0 0 13 1 1561.814 P04075 P04075 2 14 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.02294 115.57 By MS/MS 7 0 1 1 1256100 1256100 0 10748 467 11243 26631 21380 21380 1 19718 0 PYVEEGLHPQIIIR TSVTLLAAEFLKQVKPYVEEGLHPQIIIRA KPYVEEGLHPQIIIRAFRTATQLAVNKIKE K P Y I R A 0 1 0 0 0 1 2 1 1 3 1 0 0 0 2 0 0 0 1 1 0 0 14 0 1662.9093 Q99832 Q99832 110 123 CCT7 T-complex protein 1 subunit eta yes yes 3 0.0076261 92.925 By MS/MS 6 0 1 1 1723100 1723100 0 10749 2270 11244 26632 21381 21381 1 11845 0 QAAAAACQLFK VEVEGYGSKKIDAERQAAAAACQLFKGWGL DAERQAAAAACQLFKGWGLLGPRNELFDAA R Q A F K G 5 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 11 0 1177.5914 Q7L2E3 Q7L2E3 112 122 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 1.028E-05 172.94 By MS/MS 3.5 0.5 2 2 4 3298700 3298700 0 10750 1761 11245;11246 26633;26634;26635;26636 21382;21383 21382 1 136890 0 QAAASATQTIAAAQHAASTPK AIKKKLVQRLEHAAKQAAASATQTIAAAQH TQTIAAAQHAASTPKASAGPQPLLVQSCKA K Q A P K A 9 0 0 0 0 3 0 0 1 1 0 1 0 0 1 2 3 0 0 0 0 0 21 0 1994.0181 Q9Y490 Q9Y490 923 943 TLN1 Talin-1 yes yes 2;3 3.5755E-26 284.24 By MS/MS 2 0 2 2 3228900 3228900 0 10751 2888 11247;11248 26637;26638 21384;21385 21385 1 1092200 0 QAAECGPEPGVSGVGELIVR ARAEEAAGQLRRELRQAAECGPEPGVSGVG GPEPGVSGVGELIVRELDLASLRSVRAFCQ R Q A V R E 2 1 0 0 1 1 3 4 0 1 1 0 0 0 2 1 0 0 0 3 0 0 20 0 2023.9997 Q9HBH5 Q9HBH5 93 112 RDH14 Retinol dehydrogenase 14 yes yes 2 9.0688E-19 262.24 By MS/MS 8 0 1 1 655020 655020 0 10752 2505 11249 26639 21386;21387 21387 2 8269.6 0 QAAEVMGR AGAEALSQAVARYQRQAAEVMGRLMEIYQE AVARYQRQAAEVMGRLMEIYQEKLYRPPPV R Q A G R L 2 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 8 0 860.41744 Q92616 Q92616 1193 1200 GCN1L1 Translational activator GCN1 yes yes 1 0.0266 67.169 By MS/MS 2 0 1 1 0 0 0 10753 2064 11250 26640 21388 21388 0 0 0 QAANLQDCYR RRFPDLNRLAKKFQRQAANLQDCYRLYQGI KKFQRQAANLQDCYRLYQGINQLPNVIQAL R Q A Y R L 2 1 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 0 1237.551 P43246 P43246 397 406 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0018178 112.75 By MS/MS 4 0 1 1 989660 989660 0 10754 894 11251 26641 21389 21389 1 93134 0 QAAPCVLFFDELDSIAK GESEANVREIFDKARQAAPCVLFFDELDSI APCVLFFDELDSIAKARGGNIGDGGGAADR R Q A A K A 3 0 0 2 1 1 1 0 0 1 2 1 0 2 1 1 0 0 0 1 0 0 17 0 1922.9448 P55072 P55072 568 584 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00057003 155.14 By MS/MS 4 0 2 2 184990 184990 0 10755 1054 11252 26642;26643 21390;21391 21390 1 17409 0 QAASGLVGQENAR SHVKGLGLDESGLAKQAASGLVGQENAREA AKQAASGLVGQENAREACGVIVELIKSKKM K Q A A R E 3 1 1 0 0 2 1 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1299.6531 Q9Y265 Q9Y265 34 46 RUVBL1 RuvB-like 1 yes yes 2 8.3676E-05 185.25 By MS/MS By matching 7.43 1.5 3 1 1 1 1 6 1 23497000 23400000 96643 10756 2815 11253;11254 26644;26645;26646;26647;26648;26649;26650 21392;21393;21394;21395;21396 21392 4 182460 99032 QAASSLQQASLK ELLARKDSETGENIRQAASSLQQASLKLFE NIRQAASSLQQASLKLFEMAYKKMASEREG R Q A L K L 3 0 0 0 0 3 0 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1230.6568 P38646 P38646 635 646 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.00071833 147.62 By MS/MS By MS/MS 6.88 1.83 3 1 1 1 1 1 7 1 35340000 35073000 266610 10757 850 11255;11256 26651;26652;26653;26654;26655;26656;26657;26658 21397;21398;21399;21400 21400 3 363240 223890 QAAVGQGDFHLLDHR EKERLQQQKRTEALRQAAVGQGDFHLLDHR QAAVGQGDFHLLDHRGRARCKADFRGQWVL R Q A H R G 2 1 0 2 0 2 0 2 2 0 2 0 0 1 0 0 0 0 0 1 0 0 15 0 1662.8227 O43819 O43819 96 110 SCO2 Protein SCO2 homolog, mitochondrial yes yes 3 0.038419 68.033 By MS/MS 8 0 1 1 2617400 2617400 0 10758 238 11257 26659 21401 21401 1 33044 0 QACVLMIK ILTPNSIPKGFMDGKQACVLMIKALELDSN KGFMDGKQACVLMIKALELDSNLYRIGQSK K Q A I K A 1 0 0 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 961.50889 P35579 P35579 738 745 MYH9 Myosin-9 yes yes 2 0.025077 94.006 By MS/MS 2 0 2 2 883680 883680 0 10759 824 11258;11259 26660;26661 21402;21403 21403 413 2 298900 0 QADLYISEGLHPR DGTTSNVLIIGELLKQADLYISEGLHPRII LKQADLYISEGLHPRIITEGFEAAKEKALQ K Q A P R I 1 1 0 1 0 1 1 1 1 1 2 0 0 0 1 1 0 0 1 0 0 0 13 0 1497.7576 P40227;Q92526 P40227 105 117 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2;3 1.8531E-11 232.56 By MS/MS 6.77 1.37 3 3 3 2 2 13 138040000 138040000 0 10760 858 11260;11261 26662;26663;26664;26665;26666;26667;26668;26669;26670;26671;26672;26673;26674 21404;21405;21406;21407;21408 21405 3 1044500 0 QADSDIPLDR SQGSDTAWRVPNGAKQADSDIPLDRLTISY PNGAKQADSDIPLDRLTISYCRSSGPGGQN K Q A D R L 1 1 0 3 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1128.5411 Q14197 Q14197 67 76 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.0055163 104.42 By MS/MS 9 0 1 1 4832200 4832200 0 10761 1431 11262 26675 21409 21409 1 95099 0 QADVEYELR SELIYVFKQQNLEQRQADVEYELRCLLNKP QNLEQRQADVEYELRCLLNKPEKDWTEEDR R Q A L R C 1 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1121.5353 Q8N3F8 Q8N3F8 755 763 MICALL1 MICAL-like protein 1 yes yes 2 0.051694 75.213 By MS/MS 4 0 1 1 372840 372840 0 10762 1912 11263 26676 21410 21410 1 35086 0 QADVNLVNAK LSPAVIVGLLKEASKQADVNLVNAKLLVKE KEASKQADVNLVNAKLLVKEAGLNVTTSHS K Q A A K L 2 0 2 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1070.572 O43175 O43175 385 394 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.2848E-05 172.59 By MS/MS By matching 6 0 2 1 1 24876000 24725000 151130 10763 195 11264 26677;26678 21411 21411 1 169960 154860 QADYVPSDQDLLR IDCAQYFLDKIDVIKQADYVPSDQDLLRCR IKQADYVPSDQDLLRCRVLTSGIFETKFQV K Q A L R C 1 1 0 3 0 2 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 13 0 1518.7314 P63092;Q5JWF2 P63092 187 199 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.00034874 147.28 By MS/MS 7 0 1 1 2453300 2453300 0 10764 1193 11265 26679 21412 21412 1 38512 0 QAEETYENIPGQSK LLLGNLLSPDNVVRKQAEETYENIPGQSKI KQAEETYENIPGQSKITFLLQAIRNTTAAE K Q A S K I 1 0 1 0 0 2 3 1 0 1 0 1 0 0 1 1 1 0 1 0 0 0 14 0 1592.7318 O00410 O00410 28 41 IPO5 Importin-5 yes yes 2 4.588E-11 258.65 By MS/MS 4 0 1 1 2598300 2598300 0 10765 103 11266 26680 21413 21413 1 244520 0 QAEILQESR EKMRAEDGENYDIKKQAEILQESRMMIPDC NYDIKKQAEILQESRMMIPDCQRRLEAAYL K Q A S R M 1 1 0 0 0 2 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1072.5513 O75347 O75347 53 61 TBCA Tubulin-specific chaperone A yes yes 2 0.041815 79.489 By MS/MS 10 0 1 1 241060 241060 0 10766 312 11267 26681 21414 21414 1 12992 0 QAEIWLHK VNCKKALETCGGDLKQAEIWLHKEAQKEGW TCGGDLKQAEIWLHKEAQKEGWSKAAKLQG K Q A H K E 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 8 0 1023.5502 P43897 P43897 77 84 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.053039 90.709 By MS/MS 8 0 1 1 0 0 0 10767 901 11268 26682 21415 21415 0 0 0 QAELAQWQK PTREKLTPEQLHSMRQAELAQWQKVLPRRR QLHSMRQAELAQWQKVLPRRRTRNIVTGLG R Q A Q K V 2 0 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 9 0 1100.5615 Q9Y2R0 Q9Y2R0 40 48 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 2.4341E-05 176.44 By MS/MS 10 0 1 1 908740 908740 0 10768 2839 11269 26683 21416 21416 1 48978 0 QAEPTPDDALPK TPEDDELDELRPGQRQAEPTPDDALPKQEG GQRQAEPTPDDALPKQEGTASGGPDGSCDS R Q A P K Q 2 0 0 2 0 1 1 0 0 0 1 1 0 0 3 0 1 0 0 0 0 0 12 0 1280.6248 Q08AM6 Q08AM6 348 359 VAC14 Protein VAC14 homolog yes yes 2 0.0040292 106.4 By MS/MS 4.5 0.5 1 1 2 1275000 1275000 0 10769 1316 11270 26684;26685 21417 21417 1 80915 0 QAEQLSAAGEGGDAGR FTQVTRKGGRRAKKRQAEQLSAAGEGGDAG AEQLSAAGEGGDAGRMDTEEARPAKRPVFP R Q A G R M 4 1 0 1 0 2 2 4 0 0 1 0 0 0 0 1 0 0 0 0 0 0 16 0 1515.6914 Q9NRX1 Q9NRX1 31 46 PNO1 RNA-binding protein PNO1 yes yes 2 7.1993E-07 205.26 By MS/MS 7.5 0.5 1 1 2 2585600 2585600 0 10770 2560 11271 26686;26687 21418 21418 1 33354 0 QAESASEAAKK SQQATLLASNEAFKKQAESASEAAKKYMEE AFKKQAESASEAAKKYMEENDQLKKGAAVD K Q A K K Y 4 0 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 11 1 1118.5568 P51572 P51572 139 149 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.0011617 137.46 By MS/MS 7.5 0.5 1 1 2 166190 166190 0 10771 999 11272 26688;26689 21419 21419 1 2292.7 0 QAESSEAPLVQK LLKPEGDARIETIMKQAESSEAPLVQKTLT IMKQAESSEAPLVQKTLTDISNQWDNTLHL K Q A Q K T 2 0 0 0 0 2 2 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 12 0 1285.6514 Q8WXH0 Q8WXH0 2103 2114 SYNE2 Nesprin-2 yes yes 2 0.027359 81.338 By MS/MS 3 0 1 1 1123900 1123900 0 10772 2039 11273 26690 21420 21420 1 20565 0 QAFSTAAALQSAK CASESLVDEVMLTLKQAFSTAAALQSAKTQ LKQAFSTAAALQSAKTQIKLCEACPMHSLH K Q A A K T 5 0 0 0 0 2 0 0 0 0 1 1 0 1 0 2 1 0 0 0 0 0 13 0 1292.6725 O60343 O60343 435 447 TBC1D4 TBC1 domain family member 4 yes yes 2 0.00011916 171.49 By MS/MS 3 0 1 1 614440 614440 0 10773 256 11274 26691 21421;21422 21422 2 11242 0 QAFTLLGVK SIEGVDDAEDFEKTRQAFTLLGVKESHQMS DFEKTRQAFTLLGVKESHQMSIFKIIASIL R Q A V K E 1 0 0 0 0 1 0 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 9 0 975.57532 Q9ULV0 Q9ULV0 310 318 MYO5B Unconventional myosin-Vb yes yes 2 0.021746 88.177 By MS/MS 2.5 0.5 1 1 2 172470 172470 0 10774 2775 11275 26692;26693 21423 21423 1 37930 0 QAGAAVGASAR AALSRVAQAAGQGVRQAGAAVGASARLLVQ QGVRQAGAAVGASARLLVQGAWLCLCGRGL R Q A A R L 5 1 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 11 0 957.49919 Q6ZR85 Q6ZR85 135 145 C17orf107 Uncharacterized protein C17orf107 yes yes 2 0.012289 98.582 By MS/MS 10 0 1 1 104200 104200 0 10775 1742 11276 26694 21424 21424 0 5616.2 0 QAGAEALSQAVAR SLLIDDVIYHEAAVRQAGAEALSQAVARYQ VRQAGAEALSQAVARYQRQAAEVMGRLMEI R Q A A R Y 5 1 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1270.663 Q92616 Q92616 1177 1189 GCN1L1 Translational activator GCN1 yes yes 2;3 9.5491E-06 196.67 By MS/MS 2 0.756 2 3 2 7 10986000 10986000 0 10776 2064 11277;11278 26695;26696;26697;26698;26699;26700;26701 21425;21426;21427;21428;21429;21430 21426 4 2807600 0 QAGGFLGPPPPSGK IQKILGLAPSRAATKQAGGFLGPPPPSGKF KQAGGFLGPPPPSGKFS_____________ K Q A G K F 1 0 0 0 0 1 0 4 0 0 1 1 0 1 4 1 0 0 0 0 0 0 14 0 1308.6826 Q9UM00 Q9UM00 224 237 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2 0.0060555 126.5 By MS/MS 9.5 0.5 1 1 2 5146600 5146600 0 10777 2779 11279 26702;26703 21431 21431 1 103580 0 QAGLLTTDPR ALCSFVTEDEVEWMRQAGLLTTDPRVRERK VEWMRQAGLLTTDPRVRERKKPGQEGARRK R Q A P R V 1 1 0 1 0 1 0 1 0 0 2 0 0 0 1 0 2 0 0 0 0 0 10 0 1070.572 P82933 P82933 366 375 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.043011 85.355 By MS/MS 7 0 1 1 0 0 0 10778 1239 11280 26704 21432 21432 0 0 0 QAGLYSISLPNK SGELLTIYAALPFVRQAGLYSISLPNKYNF FVRQAGLYSISLPNKYNFSFDYYAFLILIM R Q A N K Y 1 0 1 0 0 1 0 1 0 1 2 1 0 0 1 2 0 0 1 0 0 0 12 0 1289.698 Q6Y1H2 Q6Y1H2 196 207 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 2 0.04476 72.096 By MS/MS 1 0 1 1 90179 90179 0 10779 1737 11281 26705 21433 21433 1 21730 0 QAGTAVPPDVQTLR ______________________________ RQAGTAVPPDVQTLRAFTTELVVEAVVRCL R Q A L R A 2 1 0 1 0 2 0 1 0 0 1 0 0 0 2 0 2 0 0 2 0 0 14 0 1451.7732 O60826 O60826 14 27 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.0095656 91.123 By MS/MS 5 0 1 1 1226000 1226000 0 10780 280 11282 26706 21434 21434 1 12296 0 QAGVFEPTIVK WIGLDLSNGKPRDNKQAGVFEPTIVKVKSL RDNKQAGVFEPTIVKVKSLKFATEAAITIL K Q A V K V 1 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 2 0 0 11 0 1187.655 P17987 P17987 500 510 TCP1 T-complex protein 1 subunit alpha yes yes 2 3.4032E-05 157.66 By MS/MS By matching 5.7 2.83 1 1 1 1 2 1 1 1 1 9 1 67146000 67018000 128180 10781 648 11283 26707;26708;26709;26710;26711;26712;26713;26714;26715;26716 21435;21436;21437;21438;21439;21440;21441;21442 21441 8 881650 131350 QAGVFEPTIVKVK WIGLDLSNGKPRDNKQAGVFEPTIVKVKSL NKQAGVFEPTIVKVKSLKFATEAAITILRI K Q A V K S 1 0 0 0 0 1 1 1 0 1 0 2 0 1 1 0 1 0 0 3 0 0 13 1 1414.8184 P17987 P17987 500 512 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.018546 99.568 By MS/MS 6 0 1 1 0 0 0 10782 648 11284 26717 21443 21443 0 0 0 QAHLCVLASNCDEPMYVK LARGIREAAKALDKRQAHLCVLASNCDEPM LCVLASNCDEPMYVKLVEALCAEHQINLIK R Q A V K L 2 0 1 1 2 1 1 0 1 0 2 1 1 0 1 1 0 0 1 2 0 0 18 0 2133.9646 P25398 P25398 46 63 RPS12 40S ribosomal protein S12 yes yes 3 7.254E-05 180.7 By MS/MS 10 0 1 1 1259700 1259700 0 10783 721 11285 26718 21444 21444 358 1 67891 0 QAHLTNQYMQR TKPLYVALAQRKEERQAHLTNQYMQRMASV KEERQAHLTNQYMQRMASVRAVPNPVINPY R Q A Q R M 1 1 1 0 0 3 0 0 1 0 1 0 1 0 0 0 1 0 1 0 0 0 11 0 1388.6619 P11940 P11940 375 385 PABPC1 Polyadenylate-binding protein 1 yes yes 2;3 0.0003227 139.31 By MS/MS 5 0 3 3 662740 662740 0 10784 586 11286;11287 26719;26720;26721 21445;21446;21447 21445 274 3 6646.9 0 QAHTMDPQLR DLSRFDASFFGVHPKQAHTMDPQLRLLLEV GVHPKQAHTMDPQLRLLLEVTYEAIVDGGI K Q A L R L 1 1 0 1 0 2 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 10 0 1195.5768 P49327 P49327 71 80 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.0022716 109.79 By MS/MS 3 1.07 3 2 1 1 7 5738800 5738800 0 10785 946 11288;11289 26722;26723;26724;26725;26726;26727;26728 21448;21449;21450 21448 510 3 1677900 0 QAIGIALETR VNKMFQRCLDDHKYKQAIGIALETRRLDVF DHKYKQAIGIALETRRLDVFEKTILESNDV K Q A T R R 2 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1070.6084 Q99460 Q99460 149 158 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 5.1916E-05 163.38 By MS/MS 4 0 2 2 0 0 0 10786 2246 11290;11291 26729;26730 21451;21452 21452 1 0 0 QAITQVVVSR DENGNRLGESANAAKQAITQVVVSRILMAA ANAAKQAITQVVVSRILMAAPGMAIPPFIM K Q A S R I 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 10 0 1099.635 Q9H9B4 Q9H9B4 224 233 SFXN1 Sideroflexin-1 yes yes 2 1.0702E-10 215.72 By MS/MS 8 1.22 1 2 2 2 1 8 40731000 40731000 0 10787 2485 11292;11293 26731;26732;26733;26734;26735;26736;26737;26738 21453;21454;21455;21456;21457 21454 4 545790 0 QAIVNASR LIITDGVITDLDETRQAIVNASRLPMSIII TDLDETRQAIVNASRLPMSIIIVGVGGADF R Q A S R L 2 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 8 0 857.47191 O75131 O75131 439 446 CPNE3 Copine-3 yes yes 2 0.016227 103.83 By MS/MS By matching 6 0 2 1 1 1949100 1823900 125200 10788 294 11294 26739;26740 21458 21458 1 12538 128290 QAKEEAQAEIEQYR EKVSEARKRKNRRLKQAKEEAQAEIEQYRL KQAKEEAQAEIEQYRLQREKEFKAKEAAAL K Q A Y R L 3 1 0 0 0 3 4 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 14 1 1691.8115 O75348 O75348 35 48 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 3 0.00032441 133.98 By MS/MS 10 0 1 1 123140 123140 0 10789 313 11295 26741 21459 21459 1 6637 0 QALAYLEQSYK LKNRSSVEVRMEFVRQALAYLEQSYKNYTL EFVRQALAYLEQSYKNYTLVTVFGNLHQAQ R Q A Y K N 2 0 0 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 11 0 1312.6663 Q8N1F7 Q8N1F7 257 267 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.0013188 115.23 By MS/MS 4 0 2 2 1636000 1636000 0 10790 1903 11296;11297 26742;26743 21460;21461 21460 1 153960 0 QALDFIFAPGR FMVDLWHPNVAAAERQALDFIFAPGR____ AAERQALDFIFAPGR_______________ R Q A G R - 2 1 0 1 0 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 11 0 1233.6506 Q6ICH7 Q6ICH7 359 369 ASPHD2 Aspartate beta-hydroxylase domain-containing protein 2 yes yes 2 2.6192E-06 180.09 By MS/MS 8 0 1 1 247580 247580 0 10791 1683 11298 26744 21462 21462 1 3125.7 0 QALEQAR RIARLRQEEREQEQRQALEQARKAEEVQAW EEREQEQRQALEQARKAEEVQAWAQRKERE R Q A A R K 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.42972 Q9BYN8 Q9BYN8 135 141 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.032587 102.77 By MS/MS 8.5 0.5 1 1 2 5107400 5107400 0 10792 2374 11299 26745;26746 21463 21463 1 81970 0 QALESILASER IKELILDIKYPATKKQALESILASERLPFS ATKKQALESILASERLPFSCLRNITQTLMD K Q A E R L 2 1 0 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1215.6459 Q9H2M9 Q9H2M9 593 603 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.00074309 126.71 By MS/MS 3 0 1 1 155640 155640 0 10793 2431 11300 26747 21464 21464 1 2847.8 0 QALETVNDYNPLMK RFHATVSFDTDTGLKQALETVNDYNPLMKD KQALETVNDYNPLMKDFPLNDLLSATELDK K Q A M K D 1 0 2 1 0 1 1 0 0 0 2 1 1 0 1 0 1 0 1 1 0 0 14 0 1634.7974 Q14204 Q14204 324 337 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.5456E-43 322.99 By MS/MS 1.33 0.471 2 1 3 514950 514950 0 10794 1433 11301;11302 26748;26749;26750 21465;21466;21467;21468 21465 835 2 148400 0 QALHSGQNQLK KQRLRHEILLSQSVRQALHSGQNQLKEMAI QSVRQALHSGQNQLKEMAIPVLEARACAAA R Q A L K E 1 0 1 0 0 3 0 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1222.6418 P54886 P54886 139 149 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 1.1294E-06 189.18 By MS/MS 5 0 2 2 3646300 3646300 0 10795 1048 11303;11304 26751;26752 21469;21470 21469 1 36570 0 QALSEVTAALR SSSLDDVDHKILTAKQALSEVTAALRERLH LTAKQALSEVTAALRERLHRWQQIEILCGF K Q A L R E 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 11 0 1157.6404 Q13586 Q13586 414 424 STIM1 Stromal interaction molecule 1 yes yes 2 0.0044721 120.06 By MS/MS 4.5 0.5 2 2 4 1875000 1875000 0 10796 1400 11305;11306 26753;26754;26755;26756 21471;21472;21473 21472 1 107070 0 QALTDFLLAR EALCSIMLLEESSPRQALTDFLLARKATIQ ESSPRQALTDFLLARKATIQKLLNQPHHGA R Q A A R K 2 1 0 1 0 1 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 10 0 1146.6397 Q8WTW3 Q8WTW3 225 234 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.010513 93.178 By MS/MS 8 0 1 1 58726 58726 0 10797 2010 11307 26757 21474 21474 1 741.41 0 QAMSELQKAVSDAERK DIWRKAEEAVNEVKRQAMSELQKAVSDAER AMSELQKAVSDAERKAHELITTERAKMERA R Q A R K A 3 1 0 1 0 2 2 0 0 0 1 2 1 0 0 2 0 0 0 1 0 0 16 2 1789.8992 O75081 O75081 500 515 CBFA2T3 Protein CBFA2T3 yes yes 2 0.0036832 95.618 By MS/MS By matching 3.75 0.829 2 1 1 3 1 0 0 0 10798 290 11308 26758;26759;26760;26761 21475 21475 0 0 0 QANKEYLLGSTAEEK PSLTGLTTIAAHLVKQANKEYLLGSTAEEK QANKEYLLGSTAEEKAIVQQWLEYRVTQVD K Q A E K A 2 0 1 0 0 1 3 1 0 0 2 2 0 0 0 1 1 0 1 0 0 0 15 1 1679.8366 O43324 O43324 54 68 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2;3 2.4926E-32 306.64 By MS/MS By matching 9.43 0.495 4 3 6 1 10327000 10293000 33778 10799 204 11309;11310 26762;26763;26764;26765;26766;26767;26768 21476;21477;21478;21479;21480;21481 21480 4 255000 77025 QAPAPTVIRDPPSITPAVK TQDPSSPGTTPPQARQAPAPTVIRDPPSIT PTVIRDPPSITPAVKSPLPGPSEEKTLQPS R Q A V K S 3 1 0 1 0 1 0 0 0 2 0 1 0 0 5 1 2 0 0 2 0 0 19 1 1957.0997 Q13112 Q13112 439 457 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.00038714 140.1 By MS/MS 5 0 1 1 0 0 0 10800 1353 11311 26769 21482 21482 0 0 0 QAPESPWEEQLAR LLSKQMAGCLEDCTRQAPESPWEEQLARLL TRQAPESPWEEQLARLLQEAPGKLSLDVEQ R Q A A R L 2 1 0 0 0 2 3 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 13 0 1539.7318 O00411 O00411 181 193 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00059406 150.46 By MS/MS 3 0 2 2 790410 790410 0 10801 104 11312;11313 26770;26771 21483;21484;21485 21484 1 14462 0 QAQIEVVPSASALIIK WKGLRITVKLTIQNRQAQIEVVPSASALII AQIEVVPSASALIIKALKEPPRDRKKQKNI R Q A I K A 3 0 0 0 0 2 1 0 0 3 1 1 0 0 1 2 0 0 0 2 0 0 16 0 1665.9665 P30050 P30050 68 83 RPL12 60S ribosomal protein L12 yes yes 2 1.4111E-16 255.24 By MS/MS 9.5 0.5 2 2 4 2151900 2151900 0 10802 766 11314;11315 26772;26773;26774;26775 21486;21487;21488 21486 2 52207 0 QAQILASEAEK EGTRESAINVAEGKKQAQILASEAEKAEQI EGKKQAQILASEAEKAEQINQAAGEASAVL K Q A E K A 3 0 0 0 0 2 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1186.6194 Q9UJZ1 Q9UJZ1 223 233 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 2.0028E-05 163.84 By MS/MS By matching 7 0 2 1 1 4740000 4673300 66749 10803 2755 11316 26776;26777 21489 21489 1 73362 120210 QAQILASEAEKAEQINQAAGEASAVLAK EGTRESAINVAEGKKQAQILASEAEKAEQI QINQAAGEASAVLAKAKAKAEAIRILAAAL K Q A A K A 9 0 1 0 0 4 4 1 0 2 2 2 0 0 0 2 0 0 0 1 0 0 28 1 2838.4723 Q9UJZ1 Q9UJZ1 223 250 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 1.3112E-20 230.91 By MS/MS 7 0 1 1 412160 412160 0 10804 2755 11317 26778 21490 21490 1 6470.2 0 QAQQERDELADEIANSSGK IQLQEELAAAERAKRQAQQERDELADEIAN ERDELADEIANSSGKGALALEEKRRLEARI R Q A G K G 3 1 1 2 0 3 3 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 19 1 2087.972 P35579 P35579 1698 1716 MYH9 Myosin-9 yes yes 3 0.00017545 117.27 By MS/MS 2 0 1 1 1689700 1689700 0 10805 824 11318 26779 21491;21492 21492 2 571520 0 QAQQTVR ALVAVLLSRTWHVRRQAQQTVRKLLSSLGG SRTWHVRRQAQQTVRKLLSSLGGFKLAHGL R Q A V R K 1 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 7 0 829.44061 Q92616 Q92616 583 589 GCN1L1 Translational activator GCN1 yes yes 2 0.012068 130.04 By MS/MS 3 0.816 1 1 1 3 683740 683740 0 10806 2064 11319 26780;26781;26782 21493 21493 1 111020 0 QAQSPAGVSSEVEVLK VSRHERSLRMTVVKRQAQSPAGVSSEVEVL AQSPAGVSSEVEVLKALKSLFEHHKALDEK R Q A L K A 2 0 0 0 0 2 2 1 0 0 1 1 0 0 1 3 0 0 0 3 0 0 16 0 1627.8417 Q13136 Q13136 147 162 PPFIA1 Liprin-alpha-1 yes yes 2 1.9513E-16 249.28 By MS/MS 3 0 1 1 553480 553480 0 10807 1356 11320 26783 21494 21494 1 10127 0 QAQVPLAAVIKPLAR RCTSYNIPCTSDMAKQAQVPLAAVIKPLAR QAQVPLAAVIKPLARLPPEEASPYVVDHGE K Q A A R L 4 1 0 0 0 2 0 0 0 1 2 1 0 0 2 0 0 0 0 2 0 0 15 1 1573.9668 P53992 P53992 390 404 SEC24C Protein transport protein Sec24C yes yes 2 0.010064 111.86 By MS/MS 4 0 1 1 0 0 0 10808 1039 11321 26784 21495 21495 0 0 0 QASIQHIQNAIDTEK DKLNEQKLAQLEEAKQASIQHIQNAIDTEK QASIQHIQNAIDTEKSQQALVQKRHYLFDV K Q A E K S 2 0 1 1 0 3 1 0 1 3 0 1 0 0 0 1 1 0 0 0 0 0 15 0 1694.8588 P24539 P24539 140 154 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 9.4103E-24 311.54 By MS/MS 8.5 0.5 2 2 4 8934800 8934800 0 10809 714 11322;11323 26785;26786;26787;26788 21496;21497;21498;21499;21500 21497 2 135410 0 QASPNIVIALAGNK DTFARAKNWVKELQRQASPNIVIALAGNKA RQASPNIVIALAGNKADLASKRAVEFQEAQ R Q A N K A 3 0 2 0 0 1 0 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 14 0 1394.7882 P51148 P51148 122 135 RAB5C Ras-related protein Rab-5C yes yes 2 2.1495E-07 215.04 By MS/MS 8.5 0.5 2 2 4 3770700 3770700 0 10810 989 11324;11325 26789;26790;26791;26792 21501;21502;21503;21504 21502 2 61931 0 QASPNIVIALSGNK ESFARAKNWVKELQRQASPNIVIALSGNKA RQASPNIVIALSGNKADLANKRAVDFQEAQ R Q A N K A 2 0 2 0 0 1 0 1 0 2 1 1 0 0 1 2 0 0 0 1 0 0 14 0 1410.7831 P20339 P20339 121 134 RAB5A Ras-related protein Rab-5A yes yes 2 0.0005945 132.5 By MS/MS 8.5 0.5 1 1 2 753720 753720 0 10811 669 11326 26793;26794 21505 21505 1 12274 0 QASQGMVGQLAAR SHIRGLGLDDALEPRQASQGMVGQLAARRA PRQASQGMVGQLAARRAAGVVLEMIREGKI R Q A A R R 3 1 0 0 0 3 0 2 0 0 1 0 1 0 0 1 0 0 0 1 0 0 13 0 1315.6667 Q9Y230 Q9Y230 41 53 RUVBL2 RuvB-like 2 yes yes 2 0.00039015 143 By MS/MS By matching 6 0 3 2 1 6186800 6164000 22834 10812 2810 11327;11328 26795;26796;26797 21506;21507 21507 1177 2 42373 23398 QASTVVFSDTVVVSEK DAAILLQQVMRAFSKQASTVVFSDTVVVSE ASTVVFSDTVVVSEKFINDCTELFRELMHQ K Q A E K F 1 0 0 1 0 1 1 0 0 0 0 1 0 1 0 3 2 0 0 5 0 0 16 0 1694.8727 O94874 O94874 352 367 UFL1 E3 UFM1-protein ligase 1 yes yes 2 3.025E-07 217.2 By MS/MS 4 0 1 1 1019900 1019900 0 10813 372 11329 26798 21508 21508 1 95980 0 QATDDASLLIVNR IEDELREHIEKLERRQATDDASLLIVNRYW RRQATDDASLLIVNRYWSQFDENIRIILKR R Q A N R Y 2 1 1 2 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1414.7416 Q5VTR2 Q5VTR2 83 95 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 6.3226E-07 203.03 By MS/MS 3 0 1 1 409980 409980 0 10814 1648 11330 26799 21509 21509 1 7501.5 0 QATDDATLLIVNR CEDELRERIEKLEKRQATDDATLLIVNRYW KRQATDDATLLIVNRYWAQLDETVEALLRC R Q A N R Y 2 1 1 2 0 1 0 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 13 0 1428.7573 O75150 O75150 84 96 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.0054285 119.34 By MS/MS 3 0 2 2 574280 574280 0 10815 297 11331;11332 26800;26801 21510;21511;21512 21510 1 10508 0 QATELALLQR GEAGRAGAAPVAPEKQATELALLQRQHALL VAPEKQATELALLQRQHALLQEELRRCRRL K Q A Q R Q 2 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1141.6455 Q92974 Q92974 800 809 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.0044249 106.88 By MS/MS 3.5 0.5 1 1 2 956170 956170 0 10816 2083 11333 26802;26803 21513 21513 1 69164 0 QATENAKEEVRR STWVFPTLGIMHHNKQATENAKEEVRRILG HNKQATENAKEEVRRILGLLDAYLKTRTFL K Q A R R I 2 2 1 0 0 1 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 12 2 1429.7274 P26641 P26641 126 137 EEF1G Elongation factor 1-gamma yes yes 2;3 0.0017857 141.91 By MS/MS By matching 6.86 0.639 2 4 1 6 1 4962400 4954500 7853.9 10817 736 11334;11335 26804;26805;26806;26807;26808;26809;26810 21514;21515;21516;21517;21518 21514 3 66154 14145 QATKDAGQISGLNVLR NAVITVPAYFNDSQRQATKDAGQISGLNVL ATKDAGQISGLNVLRVINEPTAAALAYGLD R Q A L R V 2 1 1 1 0 2 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 16 1 1669.9111 P38646 P38646 203 218 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 1.526E-16 267.37 By MS/MS By matching 5 0 4 3 1 14754000 14754000 0 10818 850 11336;11337 26811;26812;26813;26814 21519;21520;21521 21521 2 147970 0 QATKDAGTIAGLNVLR NAVVTVPAYFNDSQRQATKDAGTIAGLNVL ATKDAGTIAGLNVLRIINEPTAAAIAYGLD R Q A L R I 3 1 1 1 0 1 0 2 0 1 2 1 0 0 0 0 2 0 0 1 0 0 16 1 1626.9053 P11142 P11142 156 171 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 3.133E-32 297.5 By MS/MS By matching 5.6 1.02 7 1 1 1 9 1 22851000 22851000 0 10819 572 11338;11339 26815;26816;26817;26818;26819;26820;26821;26822;26823;26824 21522;21523;21524;21525;21526;21527;21528 21528 3 229190 0 QATKDAGTIAGLNVMR HAVVTVPAYFNDAQRQATKDAGTIAGLNVM ATKDAGTIAGLNVMRIINEPTAAAIAYGLD R Q A M R I 3 1 1 1 0 1 0 2 0 1 1 1 1 0 0 0 2 0 0 1 0 0 16 1 1644.8617 P11021 P11021 182 197 HSPA5 78 kDa glucose-regulated protein yes yes 2 4.9826E-05 187.62 By MS/MS 5 0 1 1 0 0 0 10820 571 11340 26825 21529;21530 21530 253 0 0 0 QATKDAGVIAGLNVLR NAVITVPAYFNDSQRQATKDAGVIAGLNVL ATKDAGVIAGLNVLRIINEPTAAAIAYGLD R Q A L R I 3 1 1 1 0 1 0 2 0 1 2 1 0 0 0 0 1 0 0 2 0 0 16 1 1624.9261 P0DMV9;P0DMV8 P0DMV9 156 171 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 4.3005E-07 223.36 By MS/MS By matching 5.7 1 6 2 1 1 9 1 7313400 7313400 0 10821 550 11341;11342 26826;26827;26828;26829;26830;26831;26832;26833;26834;26835 21531;21532;21533;21534;21535;21536;21537 21532 2 71447 0 QATLIPDEVFDAVK IHAIITLKILDYSDKQATLIPDEVFDAVKS KQATLIPDEVFDAVKSNIVTSINFSKNQLC K Q A V K S 2 0 0 2 0 1 1 0 0 1 1 1 0 1 1 0 1 0 0 2 0 0 14 0 1544.8086 Q9H9A6 Q9H9A6 410 423 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.00041548 138.24 By MS/MS 5 0 1 1 281670 281670 0 10822 2484 11343 26836 21538 21538 1 2825 0 QATTIIADNIIFLSDQTK KIDYGEYMDKNNVRRQATTIIADNIIFLSD TIIADNIIFLSDQTKEKE____________ R Q A T K E 2 0 1 2 0 2 0 0 0 4 1 1 0 1 0 1 3 0 0 0 0 0 18 0 1991.0575 Q04837 Q04837 128 145 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 3 0.0001113 136.36 By MS/MS 10 0 1 1 131230 131230 0 10823 1293 11344 26837 21539;21540 21540 2 7073 0 QATTIIADNIIFLSDQTKEKE KIDYGEYMDKNNVRRQATTIIADNIIFLSD ADNIIFLSDQTKEKE_______________ R Q A K E - 2 0 1 2 0 2 2 0 0 4 1 2 0 1 0 1 3 0 0 0 0 0 21 2 2377.2377 Q04837 Q04837 128 148 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 3 0.00068505 99.092 By MS/MS 10 0 1 1 336890 336890 0 10824 1293 11345 26838 21541;21542 21541 2 18157 0 QAVDVSPLR REDSTRIGRAGTVRRQAVDVSPLRRVNQAI AGTVRRQAVDVSPLRRVNQAIWLLCTGARE R Q A L R R 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 983.53999 P46782 P46782 137 145 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.002505 114.89 By MS/MS By matching 9.33 0.471 2 1 2 1 48792000 48492000 300260 10825 919 11346 26839;26840;26841 21543 21543 1 961910 684690 QAVDVSPLRR REDSTRIGRAGTVRRQAVDVSPLRRVNQAI GTVRRQAVDVSPLRRVNQAIWLLCTGAREA R Q A R R V 1 2 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 10 1 1139.6411 P46782 P46782 137 146 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.00089318 120.87 By MS/MS 8.5 0.5 1 1 2 34554000 34554000 0 10826 919 11347 26842;26843 21544 21544 1 678150 0 QAVEAAKVR TYKLMTQAQLEEATRQAVEAAKVRLKMPPV LEEATRQAVEAAKVRLKMPPVLEERVPIND R Q A V R L 3 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 9 1 970.55598 P82650 P82650 117 125 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.0072318 103.74 By MS/MS 3 0 1 1 0 0 0 10827 1229 11348 26844 21545 21545 0 0 0 QAVELQR PSVMLPPRRLQTLLRQAVELQRDRCLYHNT RRLQTLLRQAVELQRDRCLYHNTKLDNNLD R Q A Q R D 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 842.46102 Q9H7D7 Q9H7D7 307 313 WDR26 WD repeat-containing protein 26 yes yes 2 0.048731 90.777 By MS/MS 5 0 1 1 1108000 1108000 0 10828 2461 11349 26845 21546 21546 1 11112 0 QAVEQQIQSHR EKEHLNKVQTANEVKQAVEQQIQSHRETHQ NEVKQAVEQQIQSHRETHQKQISSLRDEVE K Q A H R E 1 1 0 0 0 4 1 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1322.6691 P33176 P33176 699 709 KIF5B Kinesin-1 heavy chain yes yes 2 0.00024123 149.33 By MS/MS 4 0 2 2 653560 653560 0 10829 800 11350;11351 26846;26847 21547;21548 21548 1 61504 0 QAVLGAGLPISTPCTTINK MGNVLQGGEGQAPTRQAVLGAGLPISTPCT GAGLPISTPCTTINKVCASGMKAIMMASQS R Q A N K V 2 0 1 0 1 1 0 2 0 2 2 1 0 0 2 1 3 0 0 1 0 0 19 0 1940.0401 P24752 P24752 106 124 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 1.0953E-12 247.38 By MS/MS 7.5 0.5 2 2 4 6054800 6054800 0 10830 716 11352;11353 26848;26849;26850;26851 21549;21550;21551 21549 2 94564 0 QAVTNPNNTFYATK FTADGERLVGMPAKRQAVTNPNNTFYATKR RQAVTNPNNTFYATKRLIGRRYDDPEVQKD R Q A T K R 2 0 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 0 14 0 1567.7631 P38646 P38646 108 121 HSPA9 Stress-70 protein, mitochondrial yes yes 2 8.8705E-25 291.5 By MS/MS By MS/MS 7 2 4 1 1 1 1 2 8 2 54036000 53818000 218190 10831 850 11354;11355 26852;26853;26854;26855;26856;26857;26858;26859;26860;26861 21552;21553;21554;21555;21556;21557;21558;21559;21560 21554 6 605510 183230 QAVTNPNNTFYATKR FTADGERLVGMPAKRQAVTNPNNTFYATKR QAVTNPNNTFYATKRLIGRRYDDPEVQKDI R Q A K R L 2 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 0 15 1 1723.8642 P38646 P38646 108 122 HSPA9 Stress-70 protein, mitochondrial yes yes 2 3.5564E-06 196.15 By MS/MS By matching 5 0 3 2 1 792340 792340 0 10832 850 11356;11357 26862;26863;26864 21561;21562 21561 1 7946.7 0 QCANLQNAIADAEQR RMIQRLRAEIDNVKKQCANLQNAIADAEQR QCANLQNAIADAEQRGELALKDARNKLAEL K Q C Q R G 4 1 2 1 1 3 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 15 0 1700.79 CON__P13647;P13647 CON__P13647 406 420 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 1.6402E-66 327.06 By MS/MS By MS/MS 4 1.69 1 2 1 1 2 2 5 3418300 2308900 1109400 + 10833 52 11358 26865;26866;26867;26868;26869;26870;26871 21563;21564;21565;21566;21567 21564 5 79057 218050 QCCGTDGVEANYIK SPDEEMKKIVLKVVKQCCGTDGVEANYIKT KQCCGTDGVEANYIKTEILPPFFKHFWQHR K Q C I K T 1 0 1 1 2 1 1 2 0 1 0 1 0 0 0 0 1 0 1 1 0 0 14 0 1613.6814 O75533 O75533 794 807 SF3B1 Splicing factor 3B subunit 1 yes yes 2 2.169E-05 196.67 By MS/MS 3 0 1 1 652680 652680 0 10834 332 11359 26872 21568 21568 1 11942 0 QCFLVLR VWVRARVHTSRAKGKQCFLVLRQQQFNVQA HTSRAKGKQCFLVLRQQQFNVQALVAVGDH K Q C L R Q 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 7 0 934.50586 P14868 P14868 75 81 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 1 0.044617 94.163 By MS/MS 6.5 0.5 1 1 2 0 0 0 10835 620 11360 26873;26874 21569 21569 0 0 0 QCKDYYEILGVSR KGYTAEQVAAVKRVKQCKDYYEILGVSRGA VKQCKDYYEILGVSRGASDEDLKKAYRRLA K Q C S R G 0 1 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 2 1 0 0 13 1 1629.7821 Q9NXW2 Q9NXW2 107 119 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2;3 0.0013719 130.56 By MS/MS 7 0 2 2 1033000 1033000 0 10836 2630 11361;11362 26875;26876 21570;21571 21570 1 16217 0 QCLDLLR LLLTPWVKFLWESYRQCLDLLRNNSRVERL KFLWESYRQCLDLLRNNSRVERLYHDIAQQ R Q C L R N 0 1 0 1 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 916.48004 Q14152 Q14152 159 165 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0060444 151.29 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 37031000 37031000 0 10837 1422 11363 26877;26878;26879;26880;26881;26882;26883;26884 21572;21573 21572 2 1223200 0 QCLKYDAQDK NCWYLRNWTIHTWIRQCLKYDAQDKALYTL HTWIRQCLKYDAQDKALYTLVNKVQYGIFP R Q C D K A 1 0 0 2 1 2 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1267.5867 Q92552 Q92552 115 124 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0015281 139.43 By MS/MS 7 0 1 1 0 0 0 10838 2054 11364 26885 21574 21574 0 0 0 QCLPSLDLSCK LLSLVYKGIAPGDERQCLPSLDLSCKQLAS GDERQCLPSLDLSCKQLASGLLELAFAFGG R Q C C K Q 0 0 0 1 2 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 11 0 1319.6214 P78527 P78527 1498 1508 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00023376 140.17 By MS/MS 1.8 0.748 2 2 1 5 4335300 4335300 0 10839 1225 11365;11366 26886;26887;26888;26889;26890 21575;21576;21577;21578 21575 2 1191600 0 QCSDSSAMESLTK RLMDEAVLALRNLARQCSDSSAMESLTKHL ARQCSDSSAMESLTKHLFAILGGSEGKLTV R Q C T K H 1 0 0 1 1 1 1 0 0 0 1 1 1 0 0 4 1 0 0 0 0 0 13 0 1442.6017 Q92616 Q92616 328 340 GCN1L1 Translational activator GCN1 yes yes 2 0.00034895 147.26 By MS/MS 2 0 1 1 1009300 1009300 0 10840 2064 11367 26891 21579 21579 1 341380 0 QCVENADLPEGEK YVETIIAKCIDHYTKQCVENADLPEGEKKP TKQCVENADLPEGEKKPIDQRLEGIVNKMF K Q C E K K 1 0 1 1 1 1 3 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 13 0 1487.6562 Q99460 Q99460 111 123 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 1.809E-05 190.57 By MS/MS 4 0 1 1 520950 520950 0 10841 2246 11368 26892 21580 21580 1 49025 0 QCVENADLPEGEKKPIDQR YVETIIAKCIDHYTKQCVENADLPEGEKKP NADLPEGEKKPIDQRLEGIVNKMFQRCLDD K Q C Q R L 1 1 1 2 1 2 3 1 0 1 1 2 0 0 2 0 0 0 0 1 0 0 19 2 2225.0746 Q99460 Q99460 111 129 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3;4 0.0011199 103.13 By MS/MS 4.25 0.433 3 1 4 3272700 3272700 0 10842 2246 11369;11370 26893;26894;26895;26896 21581;21582;21583 21583 2 294390 0 QCYERGEKPK EISLPIHPMITNVAKQCYERGEKPKVTDFG TNVAKQCYERGEKPKVTDFGDKVEDPTFLN K Q C P K V 0 1 0 0 1 1 2 1 0 0 0 2 0 0 1 0 0 0 1 0 0 0 10 2 1293.6136 Q14204 Q14204 219 228 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.045047 66.056 By MS/MS 1 0 1 1 0 0 0 10843 1433 11371 26897 21584 21584 0 0 0 QDAFLALTQK TERLSSSAEFTGMTRQDAFLALTQKARGKR TGMTRQDAFLALTQKARGKRVGGDVTSDKL R Q D Q K A 2 0 0 1 0 2 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 10 0 1133.6081 Q15031 Q15031 420 429 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 2.4295E-08 200.71 By MS/MS 4.33 0.471 2 1 3 3894900 3894900 0 10844 1477 11372;11373 26898;26899;26900 21585;21586 21585 1 305470 0 QDCSQLVER ALLTVLNNSMDLDMKQDCSQLVERINVFKT MDLDMKQDCSQLVERINVFKTAFSENEDDE K Q D E R I 0 1 0 1 1 2 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1133.5135 Q9ULT8 Q9ULT8 934 942 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 9.7437E-05 162.64 By MS/MS 2 0.816 1 1 1 3 1002200 1002200 0 10845 2774 11374 26901;26902;26903 21587;21588 21587 2 253060 0 QDFETVLLLEPGNK RGTARTFLGKLNEAKQDFETVLLLEPGNKQ KQDFETVLLLEPGNKQAVTELSKIKKELIE K Q D N K Q 0 0 1 1 0 1 2 1 0 0 3 1 0 1 1 0 1 0 0 1 0 0 14 0 1601.8301 Q9H6T3 Q9H6T3 371 384 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 2.267E-07 240.6 By MS/MS 5 0 1 1 572340 572340 0 10846 2459 11375 26904 21589 21589 1 5740.3 0 QDGQFSVLFTK TQHAVEGDCDIHVLKQDGQFSVLFTKCDSS HVLKQDGQFSVLFTKCDSSPDSAEDVRKLC K Q D T K C 0 0 0 1 0 2 0 1 0 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1268.6401 CON__P12763 CON__P12763 121 131 yes yes 2 1.8488E-13 241.4 By MS/MS 6 0.816 1 1 1 3 3895900 3895900 0 + 10847 49 11376 26905;26906;26907 21590;21591;21592 21592 3 32942 0 QDIAFAYQR VTIVNILTNRSNAQRQDIAFAYQRRTKKEL RSNAQRQDIAFAYQRRTKKELASALKSALS R Q D Q R R 2 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 9 0 1110.5458 P07355 P07355 69 77 ANXA2 Annexin A2 yes yes 2 0.0002628 159.58 By MS/MS By MS/MS 5.5 2.94 1 1 1 2 2 1 1 1 2 8 2544200 1411200 1133100 10848 508 11377 26908;26909;26910;26911;26912;26913;26914;26915;26916;26917 21593;21594;21595 21593 3 69670 696130 QDLADVVQVCEGK EREVKMGAKLLQDVRQDLADVVQVCEGKKK VRQDLADVVQVCEGKKKQTNYLRTLINELV R Q D G K K 1 0 0 2 1 2 1 1 0 0 1 1 0 0 0 0 0 0 0 3 0 0 13 0 1459.6977 Q14204 Q14204 4429 4441 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.5797E-34 312.95 By MS/MS 1.33 0.471 2 1 3 2135500 2135500 0 10849 1433 11378;11379 26918;26919;26920 21596;21597;21598;21599 21597 2 606570 0 QDLAYER YAYPSDYDMHTGDPKQDLAYERQYEQQTYQ DMHTGDPKQDLAYERQYEQQTYQVIPEVIK K Q D E R Q 1 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 893.4243 Q9Y262 Q9Y262 32 38 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.041832 95.815 By MS/MS 5 0 1 1 10999000 10999000 0 10850 2814 11380 26921 21600 21600 1 110310 0 QDLDRGLELISK ATTYVHKGLLQLQWKQDLDRGLELISKAIE QWKQDLDRGLELISKAIEIDNKCDFAYETM K Q D S K A 0 1 0 2 0 1 1 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 12 1 1385.7514 O94826 O94826 525 536 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2;3 2.6185E-05 159.09 By MS/MS 5.25 0.433 3 1 4 6758800 6758800 0 10851 369 11381;11382 26922;26923;26924;26925 21601;21602;21603 21602 2 60600 0 QDLIDEWIAK QMLKYWKGKHLVLKRQDLIDEWIAKEAKRS LVLKRQDLIDEWIAKEAKRSNSNKTMDPSC R Q D A K E 1 0 0 2 0 1 1 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1229.6292 O95251 O95251 578 587 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0013415 117.01 By MS/MS 5 0 1 1 80669 80669 0 10852 400 11383 26926 21604 21604 1 809.07 0 QDLLNVLAR VCCEGMLIQLRFLKRQDLLNVLARMMRPVS LRFLKRQDLLNVLARMMRPVSDQVQIKVTM R Q D A R M 1 1 1 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1040.5978 Q96A33 Q96A33 228 236 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 8.7808E-05 164.46 By MS/MS 6 0.707 1 2 1 4 5460800 5460800 0 10853 2101 11384;11385 26927;26928;26929;26930 21605;21606;21607;21608 21606 3 41361 0 QDLMNIAGTTLSSK LSSAVDHGSDEVKFRQDLMNIAGTTLSSKL RQDLMNIAGTTLSSKLLTHHKDHFTKLAVE R Q D S K L 1 0 1 1 0 1 0 1 0 1 2 1 1 0 0 2 2 0 0 0 0 0 14 0 1477.7446 P78371 P78371 157 170 CCT2 T-complex protein 1 subunit beta yes yes 2 5.1839E-12 246.63 By MS/MS By matching 6.25 0.433 3 1 3 1 14377000 14357000 19963 10854 1222 11386;11387 26931;26932;26933;26934 21609;21610 21610 715 2 100790 20456 QDLPGALSSNAIR EERLAGATLLIFANKQDLPGALSSNAIREV NKQDLPGALSSNAIREVLELDSIRSHHWCI K Q D I R E 2 1 1 1 0 1 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 13 0 1340.7048 P36404 P36404 127 139 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.00039112 142.89 By MS/MS 9 0 1 1 551000 551000 0 10855 832 11388 26935 21611 21611 1 10844 0 QDLPNAMNAAEITDK EDELRDAVLLVFANKQDLPNAMNAAEITDK QDLPNAMNAAEITDKLGLHSLRHRNWYIQA K Q D D K L 3 0 2 2 0 1 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 15 0 1629.7668 P84077;P61204 P84077 128 142 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 3.9825E-07 212.1 By MS/MS 9 0 1 1 355600 355600 0 10856 1116 11389 26936 21612 21612 1 6998.3 0 QDLTTLDVTK GGEAGVTLGQPHLSRQDLTTLDVTKLTPLS PHLSRQDLTTLDVTKLTPLSHEVISRQATI R Q D T K L 0 0 0 2 0 1 0 0 0 0 2 1 0 0 0 0 3 0 0 1 0 0 10 0 1132.5976 P41091;Q2VIR3 P41091 18 27 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 6.7276E-06 176.6 By MS/MS By MS/MS 6.67 3.04 1 2 1 2 5 1 23579000 23427000 152150 10857 866 11390;11391 26937;26938;26939;26940;26941;26942 21613;21614;21615;21616;21617;21618 21615 5 353420 155910 QDLTTLDVTKLTPLSHEVISR GGEAGVTLGQPHLSRQDLTTLDVTKLTPLS DVTKLTPLSHEVISRQATINIGTIGHVAHG R Q D S R Q 0 1 0 2 0 1 1 0 1 1 4 1 0 0 1 2 4 0 0 2 0 0 21 1 2365.2853 P41091;Q2VIR3 P41091 18 38 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 3;4 1.9311E-06 136.61 By MS/MS 6 0 2 2 1017600 1017600 0 10858 866 11392;11393 26943;26944 21619;21620 21620 1 6995.5 0 QDNEQLAR VLLSDVFAQLQWCVKQDNEQLARSGTNCLE QLQWCVKQDNEQLARSGTNCLENLVISNGE K Q D A R S 1 1 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 972.46247 Q9Y6D5 Q9Y6D5 1438 1445 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.045256 108.09 By MS/MS 2 0 1 1 331490 331490 0 10859 2940 11394 26945 21621 21621 0 112120 0 QDNESNVDPR GTGSDVDDDMSGDEKQDNESNVDPRDDVFG SGDEKQDNESNVDPRDDVFGYPQQFEDKPA K Q D P R D 0 1 2 2 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 10 0 1172.5058 Q93008 Q93008 1605 1614 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.00052125 132.88 By MS/MS 2 0 1 1 191830 191830 0 10860 2085 11395 26946 21622 21622 1 64883 0 QDPQLHPEDPERR FGMDLKRGMLLRLARQDPQLHPEDPERRAA ARQDPQLHPEDPERRAAIYDKYKEFAIPEE R Q D R R A 0 2 0 2 0 2 2 0 1 0 1 0 0 0 3 0 0 0 0 0 0 0 13 1 1615.7703 Q13084 Q13084 172 184 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 3 0.015199 90.434 By MS/MS 8 0 2 2 1419500 1419500 0 10861 1350 11396;11397 26947;26948 21623;21624 21624 0 17921 0 QDPYLLK GTWKLWDTDVEYKKKQDPYLLKTGRFEEAA TDVEYKKKQDPYLLKTGRFEEAAGAAPCRL K Q D L K T 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 0 7 0 875.47527 Q9Y4P3 Q9Y4P3 316 322 TBL2 Transducin beta-like protein 2 yes yes 2 0.048731 90.777 By MS/MS 7 0 1 1 644220 644220 0 10862 2899 11398 26949 21625 21625 1 10113 0 QDQDAGTIER PDLLSYAAALQCMGRQDQDAGTIERCLEQM QCMGRQDQDAGTIERCLEQMSQEGLKLQAL R Q D E R C 1 1 0 2 0 2 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1131.5156 O00411 O00411 309 318 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.039529 92.239 By MS/MS 3 0 1 1 260120 260120 0 10863 104 11399 26950 21626 21626 1 4759.5 0 QDQPIDFSEDARPSPCYQLAQR ARGSGIHRLAFLLFKQDQPIDFSEDARPSP SEDARPSPCYQLAQRTFRTFDFYKKHQETM K Q D Q R T 2 2 0 3 1 4 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 0 22 1 2620.1976 Q96DV4 Q96DV4 275 296 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 3 5.8159E-06 124.91 By MS/MS 7 0 1 1 3261600 3261600 0 10864 2138 11400 26951 21627 21627 1 51201 0 QDQVCIAR KKSGEKSKTRPRFVKQDQVCIARLRTAGTI TRPRFVKQDQVCIARLRTAGTICLETFKDF K Q D A R L 1 1 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 988.47601 P15170;Q8IYD1 P15170 449 456 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 0.046652 83.753 By MS/MS 5 0 1 1 590890 590890 0 10865 623 11401 26952 21628 21628 1 5926.3 0 QDTFSGTGFFPLDR DQIVSKAAYVLFYQRQDTFSGTGFFPLDRE RQDTFSGTGFFPLDRETKGASAATGIPLES R Q D D R E 0 1 0 2 0 1 0 2 0 0 1 0 0 3 1 1 2 0 0 0 0 0 14 0 1586.7365 Q9Y4E8 Q9Y4E8 933 946 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.00041536 138.2 By MS/MS 4 0 1 1 75796 75796 0 10866 2893 11402 26953 21629 21629 1 7132.9 0 QDVDDEYGVSQALAR DVSEVDARHIIENAKQDVDDEYGVSQALAR QDVDDEYGVSQALARGLQSYYAVAHAVTER K Q D A R G 2 1 0 3 0 2 1 1 0 0 1 0 0 0 0 1 0 0 1 2 0 0 15 0 1664.7642 P51532 P51532 712 726 SMARCA4 Transcription activator BRG1 yes yes 2 2.3766E-33 311.54 By MS/MS 2 0 1 1 286410 286410 0 10867 995 11403 26954 21630 21630 1 96876 0 QDVYDLLK GGSLGLGLAAMGTARQDVYDLLKTNLYQDD AAMGTARQDVYDLLKTNLYQDDAVTGEAAG R Q D L K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 8 0 992.51786 Q99460 Q99460 491 498 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.00035906 162.25 By MS/MS By matching 3.83 1.57 1 1 2 1 1 5 1 8812100 8755600 56461 10868 2246 11404 26955;26956;26957;26958;26959;26960 21631;21632;21633;21634 21633 4 720130 120300 QDVYGPQPQVR ERYRPSMEGYRAPSRQDVYGPQPQVRVGGS APSRQDVYGPQPQVRVGGSSVDLHRFHPEP R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 O60716 O60716 254 264 CTNND1 Catenin delta-1 yes yes 2 4.9614E-17 217.66 By MS/MS 4 0 2 2 0 0 0 10869 272 11405;11406 26961;26962 21635;21636 21635 1 0 0 QDYQQLFAAKCSGCMEK LTTSCYFRDRKLYCKQDYQQLFAAKCSGCM YQQLFAAKCSGCMEKIAPTEFVMRALECVY K Q D E K I 2 0 0 1 2 3 1 1 0 0 1 2 1 1 0 1 0 0 1 0 0 0 17 1 2062.8911 O60663 O60663 105 121 LMX1B LIM homeobox transcription factor 1-beta yes yes 2 0.054827 55.258 By MS/MS By matching 5.45 3 2 1 1 1 1 2 1 1 1 10 1 0 0 0 10870 268 11407 26963;26964;26965;26966;26967;26968;26969;26970;26971;26972;26973 21637 21637 116 0 0 0 QEAIAQNR FIDSQRVWAEYALKRQEAIAQNRRLTLEDL AEYALKRQEAIAQNRRLTLEDLEDSWDRGI R Q E N R R 2 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 928.47264 Q6P2Q9 Q6P2Q9 1394 1401 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.032507 89.142 By MS/MS 2 0 1 1 404410 404410 0 10871 1708 11408 26974 21638 21638 1 136790 0 QEALIESLCEK MNSVVSLLLILEPDKQEALIESLCEKLVKF EPDKQEALIESLCEKLVKFREGERPSLRLQ K Q E E K L 1 0 0 0 1 1 3 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1318.6439 Q7L2H7 Q7L2H7 79 89 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.00016733 145.99 By MS/MS 7 0 1 1 1390200 1390200 0 10872 1762 11409 26975 21639 21639 1 21824 0 QEDGSLCLVQFPSR NRDVQYRGRVRVQLKQEDGSLCLVQFPSRK KQEDGSLCLVQFPSRKSVMLYAAEMIPKLK K Q E S R K 0 1 0 1 1 2 1 1 0 0 2 0 0 1 1 2 0 0 0 1 0 0 14 0 1634.7723 P09132 P09132 88 101 SRP19 Signal recognition particle 19 kDa protein yes yes 2 6.4241E-17 263.89 By MS/MS 9.5 0.5 1 1 2 599200 599200 0 10873 533 11410 26976;26977 21640 21640 1 27788 0 QEDGSLCLVQFPSRK NRDVQYRGRVRVQLKQEDGSLCLVQFPSRK QEDGSLCLVQFPSRKSVMLYAAEMIPKLKT K Q E R K S 0 1 0 1 1 2 1 1 0 0 2 1 0 1 1 2 0 0 0 1 0 0 15 1 1762.8672 P09132 P09132 88 102 SRP19 Signal recognition particle 19 kDa protein yes yes 2;3 0.0011955 159.66 By MS/MS 9.67 0.471 1 2 3 826840 826840 0 10874 533 11411;11412 26978;26979;26980 21641;21642 21641 0 37579 0 QEDKDDLDVTELTNEDLLDQLVK AAVGRKATKKTDKPRQEDKDDLDVTELTNE VTELTNEDLLDQLVKYGVNPGPIVGTTRKL R Q E V K Y 0 0 1 6 0 2 3 0 0 0 5 2 0 0 0 0 2 0 0 2 0 0 23 1 2687.3025 P42166;P42167 P42166 104 126 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 1.5694E-07 143.74 By MS/MS 6 0 1 1 507330 507330 0 10875 875;876 11413 26981 21643 21643 1 3487.5 0 QEDVIATANLSR TMATAKAVAAGNSCRQEDVIATANLSRRAI SCRQEDVIATANLSRRAIADMLRACKEAAY R Q E S R R 2 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1315.6732 Q9Y490;Q9Y4G6 Q9Y490 2198 2209 TLN1;TLN2 Talin-1;Talin-2 no no 2 1.7116E-12 232.56 By MS/MS 2.5 1.12 1 1 1 1 4 2903400 2903400 0 10876 2888;2895 11414 26982;26983;26984;26985 21644;21645;21646;21647 21645 4 718610 0 QEDVVEDLLR NDLYQTPLHLAVITKQEDVVEDLLRAGADL AVITKQEDVVEDLLRAGADLSLLDRLGNSV K Q E L R A 0 1 0 2 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 10 0 1214.6143 P19838 P19838 594 603 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 2 0.00031977 157.66 By MS/MS 4 0 1 1 238710 238710 0 10877 666 11415 26986 21648 21648 1 22464 0 QEEAEDPACIPIFWVSK HSVNASKPSERGLVRQEEAEDPACIPIFWV EAEDPACIPIFWVSKWVDYSDKYGLGYQLC R Q E S K W 2 0 0 1 1 1 3 0 0 2 0 1 0 1 2 1 0 1 0 1 0 0 17 0 2017.9455 P53350 P53350 397 413 PLK1 Serine/threonine-protein kinase PLK1 yes yes 2 5.7273E-57 345.25 By MS/MS 5.5 0.5 1 1 2 613660 613660 0 10878 1028 11416 26987;26988 21649;21650;21651 21650 3 4378 0 QEEALAEFLQR QSYFEEIALKFLEARQEEALAEFLQRKLAS LEARQEEALAEFLQRKLASLKPAERTQATL R Q E Q R K 2 1 0 0 0 2 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1332.6674 Q9P253 Q9P253 465 475 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 1.4666E-18 257.72 By MS/MS 4 0 2 2 696850 696850 0 10879 2677 11417;11418 26989;26990 21652;21653 21652 1 65579 0 QEEDSYEIFICHANVIR IEAAFRNYIHRADARQEEDSYEIFICHANV EDSYEIFICHANVIRYIVCRALQFPPEGWL R Q E I R Y 1 1 1 1 1 1 3 0 1 3 0 0 0 1 0 1 0 0 1 1 0 0 17 0 2121.979 Q96HS1 Q96HS1 219 235 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.00089021 114.21 By MS/MS 8 0 1 1 2076000 2076000 0 10880 2168 11419 26991 21654 21654 1 26210 0 QEEELQAKDEELLK WRVFTKVKPLLQVTRQEEELQAKDEELLKV RQEEELQAKDEELLKVKEKQTKVEGELEEM R Q E L K V 1 0 0 1 0 2 5 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 1700.8469 P35580 P35580 850 863 MYH10 Myosin-10 yes yes 3 0.013006 84.169 By MS/MS 2 0 1 1 1077300 1077300 0 10881 825 11420 26992 21655 21655 1 364400 0 QEEQLQR RVLVWHTRTEKPKMKQEEQLQRQGRGSDPA RTEKPKMKQEEQLQRQGRGSDPAIEV____ K Q E Q R Q 0 1 0 0 0 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 929.45666 O94766 O94766 318 324 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 0.030538 114.59 By MS/MS 3 0 1 1 356980 0 356980 10882 364 11421 26993 21656 21656 0 0 45438 QEEREQEQR AENRRLHELRIARLRQEEREQEQRQALEQA RIARLRQEEREQEQRQALEQARKAEEVQAW R Q E Q R Q 0 2 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 1230.5589 Q9BYN8 Q9BYN8 126 134 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2;3 0.0093533 113.18 By MS/MS 9 0 2 2 231430 231430 0 10883 2374 11422 26994;26995 21657;21658 21658 2 4554.6 0 QEGLESVLK NCLWTLRNLSDVATKQEGLESVLKILVNQL SDVATKQEGLESVLKILVNQLSVDDVNVLT K Q E L K I 0 0 0 0 0 1 2 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1001.5393 P14923 P14923 386 394 JUP Junction plakoglobin yes yes 2 0.0067875 117.53 By MS/MS 3 0 1 1 297620 0 297620 10884 621 11423 26996 21659 21659 1 0 37883 QEGLTFFGTELAPVR YRAPQGCSGVDECARQEGLTFFGTELAPVR QEGLTFFGTELAPVRQQELASLLRTYLARL R Q E V R Q 1 1 0 0 0 1 2 2 0 0 2 0 0 2 1 0 2 0 0 1 0 0 15 0 1663.857 Q96AQ6 Q96AQ6 597 611 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.025373 80.245 By MS/MS 4 0 1 1 47138 47138 0 10885 2108 11424 26997 21660 21660 1 4436 0 QEIAEAQQLITICR RSILLSVPLLVVDNKQEIAEAQQLITICRE KQEIAEAQQLITICREYIVGLSVETERKKL K Q E C R E 2 1 0 0 1 3 2 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 14 0 1671.8614 P53621 P53621 1045 1058 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 1.3188E-11 258.65 By MS/MS 3.33 2.05 1 1 1 3 1201700 1201700 0 10886 1034 11425 26998;26999;27000 21661;21662;21663 21662 3 46553 0 QEIFQEQLAAVPEFR PITAVKQPEKVAATRQEIFQEQLAAVPEFR QEIFQEQLAAVPEFRGLGPLFKSSPEPVAL R Q E F R G 2 1 0 0 0 3 3 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 15 0 1803.9155 Q9Y678 Q9Y678 610 624 COPG1 Coatomer subunit gamma-1 yes yes 2 3.6496E-09 225.72 By MS/MS 4.5 0.5 1 1 2 1537000 1537000 0 10887 2933 11426 27001;27002 21664;21665 21664 2 110180 0 QEIGNLDKHEELEELVAR AKVLEEYGAGVCSTRQEIGNLDKHEELEEL GNLDKHEELEELVARFLGVEAAMAYGMGFA R Q E A R F 1 1 1 1 0 1 5 1 1 1 3 1 0 0 0 0 0 0 0 1 0 0 18 1 2121.0702 O15270 O15270 208 225 SPTLC2 Serine palmitoyltransferase 2 yes yes 3 0.0052474 88.427 By MS/MS 6 0 1 1 6715400 6715400 0 10888 178 11427 27003 21666 21666 1 46163 0 QEKMSIYQAMWK CIAGVLVPAKDQPGRQEKMSIYQAMWKGVL PGRQEKMSIYQAMWKGVLRPGTALVLLEAQ R Q E W K G 1 0 0 0 0 2 1 0 0 1 0 2 2 0 0 1 0 1 1 0 0 0 12 1 1541.7371 P58107 P58107 2240 2251 EPPK1 Epiplakin yes no 3 0.039585 55.401 By MS/MS 8 0 1 1 1011200 1011200 0 10889 1084 11428 27004 21667 21667 606;607 1 12766 0 QELAVFCSPEPPAK TKGTRALEATTEHIRQELAVFCSPEPPAKT RQELAVFCSPEPPAKTSTPEDFIRMTKGIT R Q E A K T 2 0 0 0 1 1 2 0 0 0 1 1 0 1 3 1 0 0 0 1 0 0 14 0 1571.7654 Q9Y490 Q9Y490 2155 2168 TLN1 Talin-1 yes yes 2 4.1034E-11 234.87 By MS/MS 2 0 1 1 336240 336240 0 10890 2888 11429 27005 21668 21668 1 113730 0 QELGICPAVK ALAVLSTELAVRKLRQELGICPAVKQIDTV VRKLRQELGICPAVKQIDTVAAEWPAQTNY R Q E V K Q 1 0 0 0 1 1 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1113.5852 P27708 P27708 892 901 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 7.7841E-06 175.91 By MS/MS 1.5 0.5 1 1 2 1456200 1456200 0 10891 745 11430 27006;27007 21669;21670 21670 2 459650 0 QELILSNSEDK RGHYNNVSCAVFHPRQELILSNSEDKSIRV FHPRQELILSNSEDKSIRVWDMSKRTGVQT R Q E D K S 0 0 1 1 0 1 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 0 1274.6354 P53621 P53621 261 271 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 3.4715E-13 254.19 By MS/MS 2 0.816 1 1 1 3 6016100 6016100 0 10892 1034 11431 27008;27009;27010 21671;21672;21673 21673 3 614880 0 QELILSNSEDKSIR RGHYNNVSCAVFHPRQELILSNSEDKSIRV RQELILSNSEDKSIRVWDMSKRTGVQTFRR R Q E I R V 0 1 1 1 0 1 2 0 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1630.8526 P53621 P53621 261 274 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 3.8697E-16 250.51 By MS/MS 2.4 0.8 1 1 3 5 2648300 2648300 0 10893 1034 11432;11433 27011;27012;27013;27014;27015 21674;21675;21676;21677 21677 2 48457 0 QELQEVVEFLK KNVTFEHVKGVEEAKQELQEVVEFLKNPQK EEAKQELQEVVEFLKNPQKFTILGGKLPKG K Q E L K N 0 0 0 0 0 2 3 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 11 0 1360.7238 Q96TA2 Q96TA2 349 359 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.045146 76.943 By MS/MS 6 0 1 1 451510 451510 0 10894 2241 11434 27016 21678 21678 0 3103.8 0 QELSFAAR AAVDLIIKSHQGLDRQELSFAARSFYYKLR SHQGLDRQELSFAARSFYYKLRAAEQYTPK R Q E A R S 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 920.47158 P49327 P49327 2414 2421 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.02311 96.19 By MS/MS 2.5 1.12 1 1 1 1 4 11703000 11703000 0 10895 946 11435 27017;27018;27019;27020 21679 21679 1 2631900 0 QELSHALYQHDAACR MLHSFTLRQQLQTTRQELSHALYQHDAACR QELSHALYQHDAACRVIARLTKEVTAAREA R Q E C R V 3 1 0 1 1 2 1 0 2 0 2 0 0 0 0 1 0 0 1 0 0 0 15 0 1797.8217 Q9UMS4 Q9UMS4 101 115 PRPF19 Pre-mRNA-processing factor 19 yes yes 3;4 0.0037559 105.19 By MS/MS 6.25 0.433 3 1 4 4512400 4512400 0 10896 2782 11436;11437 27021;27022;27023;27024 21680;21681;21682 21681 2 33269 0 QELVLNQLIK DFDLQIAKQDYYTARQELVLNQLIKQKASF YYTARQELVLNQLIKQKASFELLQLSYEIE R Q E I K Q 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1196.7129 Q68CZ6 Q68CZ6 370 379 HAUS3 HAUS augmin-like complex subunit 3 yes yes 2 5.0431E-06 177.7 By MS/MS 5 0 2 2 1006300 1006300 0 10897 1672 11438;11439 27025;27026 21683;21684 21683 1 10092 0 QENQVPSVR ASRPSFNLLDSPHPRQENQVPSVRVEIHLP DSPHPRQENQVPSVRVEIHLPRDQSGEVDF R Q E V R V 0 1 1 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 9 0 1055.536 P46020 P46020 740 748 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 0.0063355 106.88 By MS/MS 2.5 0.5 1 1 2 302620 302620 0 10898 907 11440 27027;27028 21685 21685 1 14167 0 QEPLLIGSTK PQELNGITRALCATRQEPLLIGSTKSNMGH LCATRQEPLLIGSTKSNMGHPEPASGLAAL R Q E T K S 0 0 0 0 0 1 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 10 0 1084.6128 P49327 P49327 317 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0014052 115.78 By MS/MS 4 2 1 1 1 1 1 1 1 7 30267000 30267000 0 10899 946 11441 27029;27030;27031;27032;27033;27034;27035 21686;21687;21688;21689 21687 4 5375700 0 QEPSDSPMFIINR EPNNLNSKIAFKIIRQEPSDSPMFIINRNT IRQEPSDSPMFIINRNTGEIRTMNNFLDRE R Q E N R N 0 1 1 1 0 1 1 0 0 2 0 0 1 1 2 2 0 0 0 0 0 0 13 0 1532.7293 Q02413 Q02413 201 213 DSG1 Desmoglein-1 yes yes 2 1.8321E-05 163.46 By MS/MS By MS/MS 4.4 3.14 2 1 2 2 1 2 3 7 2117400 837570 1279800 10900 1277 11442;11443 27036;27037;27038;27039;27040;27041;27042;27043;27044;27045 21690;21691;21692;21693;21694;21695;21696;21697;21698;21699;21700;21701;21702;21703;21704 21695 762 15 73662 746430 QEQIAKR AKLLAKRMKEAKEKRQEQIAKRRRLSSLRA MKEAKEKRQEQIAKRRRLSSLRASTSKSES R Q E K R R 1 1 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 7 1 871.48756 P62753 P62753 225 231 RPS6 40S ribosomal protein S6 no no 1 NaN NaN NaN 0 0 0 10901 1169 0 0 0 QETGTEFSQELR RQSTCYKGLRRLLSKQETGTEFSQELRQLV LSKQETGTEFSQELRQLVGLLSPMVYQEVE K Q E L R Q 0 1 0 0 0 2 3 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 12 0 1423.6579 Q15051 Q15051 264 275 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.00082005 128.51 By MS/MS 5 0 1 1 1389000 1389000 0 10902 1482 11444 27046 21705 21705 1 13931 0 QETHQQLADK NMLSLTQGLFRGLSRQETHQQLADKKGLHV RGLSRQETHQQLADKKGLHVVEIREECGPL R Q E D K K 1 0 0 1 0 3 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1196.5786 P82675 P82675 356 365 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.00075943 128.27 By MS/MS 7 0 1 1 480640 480640 0 10903 1233 11445 27047 21706 21706 1 7545.3 0 QETHQQLADKK NMLSLTQGLFRGLSRQETHQQLADKKGLHV GLSRQETHQQLADKKGLHVVEIREECGPLP R Q E K K G 1 0 0 1 0 3 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 11 1 1324.6735 P82675 P82675 356 366 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 2.102E-05 173.24 By MS/MS 7.33 0.471 2 1 3 905970 905970 0 10904 1233 11446;11447 27048;27049;27050 21707;21708 21708 1 14108 0 QETSSLACGLR WKAGFKGKSKPNLLKQETSSLACGLRILFR NLLKQETSSLACGLRILFRMYMDESRVSAW K Q E L R I 1 1 0 0 1 1 1 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1220.5819 Q9Y6D6 Q9Y6D6 1722 1732 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.031775 79.489 By MS/MS 2 0 1 1 253900 253900 0 10905 2941 11448 27051 21709 21709 1 85880 0 QEVISTSSK KIWDLEGKIIVDELKQEVISTSSKAEPPQC IVDELKQEVISTSSKAEPPQCTSLAWSADG K Q E S K A 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 3 1 0 0 1 0 0 9 0 977.50294 P63244 P63244 272 280 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.042602 79.148 By MS/MS By matching 8 0 2 1 1 3990100 3906000 84085 10906 1202 11449 27052;27053 21710 21710 1 49313 113470 QEVPIIIVFR SAIGQRIVATLPYIKQEVPIIIVFRALGFV LPYIKQEVPIIIVFRALGFVSDRDILEHII K Q E F R A 0 1 0 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 0 2 0 0 10 0 1212.723 P30876 P30876 265 274 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.01001 94.309 By MS/MS 4 0 1 1 57927 57927 0 10907 781 11450 27054 21711 21711 1 5451.4 0 QEVVELLLAR RTKDTPLSLACSGGRQEVVELLLARGANKE CSGGRQEVVELLLARGANKEHRNVSDYTPL R Q E A R G 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 10 0 1168.6816 O75179 O75179 1163 1172 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 1.6047E-05 170.5 By MS/MS 2 0.816 1 1 1 3 307140 307140 0 10908 304 11451 27055;27056;27057 21712;21713;21714 21713 3 75576 0 QEYDESGPSIVHR ILASLSTFQQMWISKQEYDESGPSIVHRKC SKQEYDESGPSIVHRKCF____________ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7;P63261 P63261 360 372 ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 0.00011041 160.86 By MS/MS By MS/MS 7.58 1.26 2 5 3 2 8 4 16024000 15039000 985930 10909 1095;1203 11452;11453 27058;27059;27060;27061;27062;27063;27064;27065;27066;27067;27068;27069 21715;21716;21717;21718;21719 21718 3 253230 1746400 QEYEQLIAK VAPGKDLTKTLNDMRQEYEQLIAKNRKDIE TLNDMRQEYEQLIAKNRKDIENQYETQITQ R Q E A K N 1 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1120.5764 P35527;CON__P35527 P35527 328 336 KRT9 Keratin, type I cytoskeletal 9 yes no 2 6.1347E-06 190.26 By MS/MS By MS/MS 5.06 2.88 2 2 2 2 2 2 1 1 1 2 8 9 30670000 17591000 13079000 + 10910 822 11454 27070;27071;27072;27073;27074;27075;27076;27077;27078;27079;27080;27081;27082;27083;27084;27085;27086 21720;21721;21722;21723;21724;21725;21726;21727;21728;21729;21730;21731;21732;21733;21734;21735 21724 16 1339000 10514000 QEYGAADPGFTMRR PFGLKPRSAFSRSSRQEYGAADPGFTMRRK RQEYGAADPGFTMRRKMEHLREEREQIRQL R Q E R R K 2 2 0 1 0 1 1 2 0 0 0 0 1 1 1 0 1 0 1 0 0 0 14 1 1597.7307 Q5VUJ6 Q5VUJ6 624 637 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 3 0.0238 69.602 By MS/MS 5 0 1 1 774140 774140 0 10911 1651 11455 27087 21736 21736 897 1 7764.3 0 QEYLDTLYR GRMLFDYLADKHGFRQEYLDTLYRYAKFQY DKHGFRQEYLDTLYRYAKFQYECGNYSGAA R Q E Y R Y 0 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 9 0 1199.5823 P60228 P60228 125 133 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00098046 134.26 By MS/MS By matching 6.67 0.745 3 2 1 5 1 16670000 16630000 39537 10912 1090 11456;11457 27088;27089;27090;27091;27092;27093 21737;21738;21739;21740 21738 3 140180 40514 QFAAIQKEQLK SNPFAALFGSLADAKQFAAIQKEQLKQQSD ADAKQFAAIQKEQLKQQSDELPASPDDSDN K Q F L K Q 2 0 0 0 0 3 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 11 1 1302.7296 Q14139 Q14139 27 37 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.028001 94.309 By MS/MS 3 0 1 1 0 0 0 10913 1421 11458 27094 21741 21741 0 0 0 QFAEMYVAK VGFGSGLHGWAFTLKQFAEMYVAKFAAKGE WAFTLKQFAEMYVAKFAAKGEGQLGPAERA K Q F A K F 2 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 1 1 0 0 9 0 1085.5216 P13639 P13639 227 235 EEF2 Elongation factor 2 yes yes 2 0.013574 93.374 By MS/MS 4.33 0.471 2 1 3 4628900 4628900 0 10914 602 11459;11460 27095;27096;27097 21742;21743 21742 288 2 406650 0 QFDVNLQVPDR NAKRSKEKNPGNQGRQFDVNLQVPDRAVLG NQGRQFDVNLQVPDRAVLGTIHPDPEIEES R Q F D R A 0 1 1 2 0 2 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 11 0 1329.6677 Q5JRA6 Q5JRA6 753 763 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 0.00084544 124.67 By MS/MS 1.5 0.5 1 1 2 306070 306070 0 10915 1606 11461 27098;27099 21744;21745;21746 21746 3 87354 0 QFESLPATHIR QQRHQLKHRELFLSRQFESLPATHIRGKCS FLSRQFESLPATHIRGKCSVTLLNETDILS R Q F I R G 1 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 11 0 1297.6779 O94776 O94776 93 103 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0031219 112.71 By MS/MS 5 0 1 1 0 0 0 10916 365 11462 27100 21747 21747 0 0 0 QFHHQLR MAAHESDARRRMISKQFHHQLRVGERQPLL ARRRMISKQFHHQLRVGERQPLLGPPESMR K Q F L R V 0 1 0 0 0 2 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 964.49913 Q99613;B5ME19 Q99613 713 719 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.014785 122.98 By MS/MS 5 2.07 1 1 1 3 2 2 2 2 14 10621000 10621000 0 10917 2252 11463;11464 27101;27102;27103;27104;27105;27106;27107;27108;27109;27110;27111;27112;27113;27114 21748;21749;21750;21751;21752 21752 1 786850 0 QFIAAQGSSR VRGVLRRGMTVEGLKQFIAAQGSSRSVVNM VEGLKQFIAAQGSSRSVVNMEWDKIWAFNK K Q F S R S 2 1 0 0 0 2 0 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 10 0 1063.5411 P07814 P07814 473 482 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00034923 136.99 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 7990400 7990400 0 10918 512 11465 27115;27116;27117;27118;27119;27120 21753;21754;21755;21756;21757 21754 5 231760 0 QFIQGPPEVIR SDETKSLEEAQEWLKQFIQGPPEVIRALKK EWLKQFIQGPPEVIRALKKSVCSGRELYLE K Q F I R A 0 1 0 0 0 2 1 1 0 2 0 0 0 1 2 0 0 0 0 1 0 0 11 0 1282.7034 Q9NTX5 Q9NTX5 251 261 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 0.027066 81.95 By MS/MS 8 0 1 1 1266100 1266100 0 10919 2578 11466 27121 21758 21758 1 15984 0 QFLDFGSVNACEK VDFYARFSPSPLSMKQFLDFGSVNACEKTS MKQFLDFGSVNACEKTSFMFLRQELPVRLA K Q F E K T 1 0 1 1 1 1 1 1 0 0 1 1 0 2 0 1 0 0 0 1 0 0 13 0 1513.6871 Q15118 Q15118 61 73 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.0002887 153.49 By MS/MS 7 0 1 1 458510 458510 0 10920 1489 11467 27122 21759 21759 1 7197.8 0 QFLESSELPR RTVKHPTLLQDPDLRQFLESSELPRAVNTQ DPDLRQFLESSELPRAVNTQALSGAGILRM R Q F P R A 0 1 0 0 0 1 2 0 0 0 2 0 0 1 1 2 0 0 0 0 0 0 10 0 1204.6088 O60749 O60749 260 269 SNX2 Sorting nexin-2 yes yes 2 0.0073726 100.25 By MS/MS 5 0 1 1 2142400 2142400 0 10921 274 11468 27123 21760 21760 1 21487 0 QFNDEETLLQPPLTR EFLQLHLESVEELKKQFNDEETLLQPPLTR QFNDEETLLQPPLTRSMTVGGAFHTTEAEA K Q F T R S 0 1 1 1 0 2 2 0 0 0 3 0 0 1 2 0 2 0 0 0 0 0 15 0 1799.9054 P56962 P56962 119 133 STX17 Syntaxin-17 yes yes 2 2.0984E-16 252.04 By MS/MS 7.5 0.5 1 1 2 1377100 1377100 0 10922 1077 11469 27124;27125 21761 21761 1 21304 0 QFSSSYLSR ______________________________ ______________________________ R Q F S R S 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 0 9 0 1073.5142 P35527;CON__P35527 P35527 5 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0024992 118.33 By MS/MS 3 1.91 2 1 1 1 1 6 19011000 19011000 0 + 10923 822 11470;11471 27126;27127;27128;27129;27130;27131 21762;21763;21764;21765;21766;21767 21763 4 1184100 0 QFSYLIENMAR MAYRKGIILFISRNRQFSYLIENMARDCGE SRNRQFSYLIENMARDCGEYAHTRYFRGGM R Q F A R D 1 1 1 0 0 1 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 11 0 1370.6653 Q9Y399 Q9Y399 150 160 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 1.3498E-05 169.93 By MS/MS 8 0 2 2 1814700 1814700 0 10924 2860 11472;11473 27132;27133 21768;21769 21769 1190 2 22910 0 QFTPCQLLADHANSPNK KIVDRLKKYEAAYGKQFTPCQLLADHANSP TPCQLLADHANSPNKKFYQ___________ K Q F N K K 2 0 2 1 1 2 0 0 1 0 2 1 0 1 2 1 1 0 0 0 0 0 17 0 1939.921 P40939 P40939 743 759 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00090641 163.33 By MS/MS 5 0 1 1 0 0 0 10925 865 11474 27134 21770 21770 0 0 0 QFTPCQLLADHANSPNKK KIVDRLKKYEAAYGKQFTPCQLLADHANSP PCQLLADHANSPNKKFYQ____________ K Q F K K F 2 0 2 1 1 2 0 0 1 0 2 2 0 1 2 1 1 0 0 0 0 0 18 1 2068.016 P40939 P40939 743 760 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 8.6367E-05 133.87 By MS/MS 5 0 1 1 0 0 0 10926 865 11475 27135 21771 21771 0 0 0 QFTSSSSMK ______________________________ MTTCSRQFTSSSSMKGSCGIGGGIGGGSSR R Q F M K G 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 4 1 0 0 0 0 0 9 0 1001.4488 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 7 15 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.0048769 117.81 By MS/MS By MS/MS 5.5 3.2 2 1 1 1 1 1 1 1 1 2 6 6 4120500 3366200 754290 + 10927 39;47 11476 27136;27137;27138;27139;27140;27141;27142;27143;27144;27145;27146;27147 21772;21773 21772 22 2 336720 929570 QFTSSSSMKGSCGIGGGIGGGSSR ______________________________ GSCGIGGGIGGGSSRISSVLAGGSCRAPST R Q F S R I 0 1 0 0 1 1 0 8 0 2 0 1 1 1 0 7 1 0 0 0 0 0 24 1 2261.0165 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 7 30 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 3 5.2505E-07 119.43 By MS/MS By MS/MS 4.33 3.4 1 2 1 1 1 2 4 3729400 508440 3221000 + 10928 39;47 11477 27148;27149;27150;27151;27152;27153 21774;21775;21776;21777;21778;21779 21775 22 6 66942 4119700 QFVESLLPGNLVEK KISFFHNAVVRENLRQFVESLLPGNLVEKV RQFVESLLPGNLVEKVTNKNYVRFLSGWQQ R Q F E K V 0 0 1 0 0 1 2 1 0 0 3 1 0 1 1 1 0 0 0 2 0 0 14 0 1571.8559 Q9Y2G8 Q9Y2G8 240 253 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 4.189E-06 202.18 By MS/MS 4.5 0.5 2 2 4 698510 698510 0 10929 2827 11478;11479 27154;27155;27156;27157 21780;21781;21782 21780 2 53292 0 QFVLTLSELKR VARELKAFVEATFQRQFVLTLSELKRLFNL TFQRQFVLTLSELKRLFNLHLASLPPGHTL R Q F K R L 0 1 0 0 0 1 1 0 0 0 3 1 0 1 0 1 1 0 0 1 0 0 11 1 1332.7765 Q9NVU0 Q9NVU0 573 583 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.041774 85.355 By MS/MS 5 0 1 1 0 0 0 10930 2603 11480 27158 21783 21783 0 0 0 QFVPAVEK KLEFSDETFGSNIPKQFVPAVEKGFLDACE FGSNIPKQFVPAVEKGFLDACEKGPLSGHK K Q F E K G 1 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 2 0 0 8 0 916.50182 Q96RP9 Q96RP9 581 588 GFM1 Elongation factor G, mitochondrial yes yes 2 0.041619 85.67 By MS/MS 5 0 1 1 4417800 4417800 0 10931 2223 11481 27159 21784 21784 1 44308 0 QFVTPADVVSGNPK RAESMLQQADKLGCRQFVTPADVVSGNPKL RQFVTPADVVSGNPKLNLAFVANLFNKYPA R Q F P K L 1 0 1 1 0 1 0 1 0 0 0 1 0 1 2 1 1 0 0 3 0 0 14 0 1457.7514 P13797;Q14651 P13797 351 364 PLS3;PLS1 Plastin-3;Plastin-1 yes no 2 0.043045 77.387 By MS/MS 5 0 1 1 1814800 1814800 0 10932 605 11482 27160 21785 21785 1 18201 0 QFYINVER RILVKKEELTLEGIRQFYINVEREEWKLDT LTLEGIRQFYINVEREEWKLDTLCDLYETL R Q F E R E 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 8 0 1067.54 P60842;Q14240 P60842 248 255 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 1;2 0.0024152 150.05 By MS/MS By matching 5.62 2.82 3 2 2 2 3 3 3 3 3 2 25 1 197130000 197110000 25408 10933 1097 11483;11484 27161;27162;27163;27164;27165;27166;27167;27168;27169;27170;27171;27172;27173;27174;27175;27176;27177;27178;27179;27180;27181;27182;27183;27184;27185;27186 21786;21787;21788;21789;21790;21791;21792;21793;21794;21795 21793 7 2825500 25408 QFYINVEREEWK RILVKKEELTLEGIRQFYINVEREEWKLDT GIRQFYINVEREEWKLDTLCDLYETLTITQ R Q F W K L 0 1 1 0 0 1 3 0 0 1 0 1 0 1 0 0 0 1 1 1 0 0 12 1 1639.7995 P60842;Q14240 P60842 248 259 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2;3 1.3163E-33 299.28 By MS/MS 6.56 0.956 1 4 2 2 9 146220000 146220000 0 10934 1097 11485;11486 27187;27188;27189;27190;27191;27192;27193;27194;27195 21796;21797;21798;21799;21800;21801 21797 3 1020300 0 QGAFLVNTAR HNHHLINDFTVKQMRQGAFLVNTARGGLVD VKQMRQGAFLVNTARGGLVDEKALAQALKE R Q G A R G 2 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1075.5774 Q13363 Q13363 257 266 CTBP1 C-terminal-binding protein 1 yes yes 2 0.0055163 104.42 By MS/MS 7.5 0.5 1 1 2 1202700 1202700 0 10935 1374 11487 27196;27197 21802 21802 1 18370 0 QGAIVAVTGDGVNDSPALK TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS VAVTGDGVNDSPALKKADIGVAMGIAGSDV R Q G L K K 3 0 1 2 0 1 0 3 0 1 1 1 0 0 1 1 1 0 0 3 0 0 19 0 1810.9425 P05023;P13637;P50993 P05023 708 726 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2 6.8875E-72 367.22 By MS/MS By matching 2.64 1.23 3 4 3 3 1 13 1 22643000 22603000 39350 10936 481 11488;11489 27198;27199;27200;27201;27202;27203;27204;27205;27206;27207;27208;27209;27210;27211 21803;21804;21805;21806;21807;21808;21809;21810;21811;21812;21813;21814 21806 5 3058100 55649 QGAIVAVTGDGVNDSPALKK TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS AVTGDGVNDSPALKKADIGVAMGIAGSDVS R Q G K K A 3 0 1 2 0 1 0 3 0 1 1 2 0 0 1 1 1 0 0 3 0 0 20 1 1939.0375 P05023;P13637;P50993 P05023 708 727 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2;3 1.1322E-05 186.29 By MS/MS 2.5 1.12 2 2 2 2 8 4705200 4705200 0 10937 481 11490;11491 27212;27213;27214;27215;27216;27217;27218;27219 21815;21816;21817;21818;21819;21820;21821;21822;21823 21820 5 709770 0 QGANINEIR ELTIPNNLIGCIIGRQGANINEIRQMSGAQ GCIIGRQGANINEIRQMSGAQIKIANPVEG R Q G I R Q 1 1 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1013.5254 Q15365 Q15365 298 306 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.00049743 146.79 By MS/MS 7.33 0.471 2 1 3 14128000 14128000 0 10938 1500 11492;11493 27220;27221;27222 21824;21825;21826 21824 2 217970 0 QGDTGDWIGTFLGHK YFLISACKDGKPMLRQGDTGDWIGTFLGHK QGDTGDWIGTFLGHKGAVWGATLNKDATKA R Q G H K G 0 0 0 2 0 1 0 4 1 1 1 1 0 1 0 0 2 1 0 0 0 0 15 0 1630.774 Q9Y3F4 Q9Y3F4 45 59 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 0.0093206 104.7 By MS/MS 7 0 2 2 195040 195040 0 10939 2877 11494;11495 27223;27224 21827;21828 21827 1 3061.8 0 QGEEVFQSLSK RAYSDQAIVNLLKMRQGEEVFQSLSKILDV LKMRQGEEVFQSLSKILDVASLEVLNEVNR R Q G S K I 0 0 0 0 0 2 2 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1250.6143 Q92616 Q92616 2624 2634 GCN1L1 Translational activator GCN1 yes yes 2 0.00062811 129 By MS/MS 2.2 0.748 1 2 2 5 2954600 2954600 0 10940 2064 11496;11497 27225;27226;27227;27228;27229 21829;21830;21831 21830 2 799170 0 QGFGNLPICMAK ELLPEAQHKAEVYTKQGFGNLPICMAKTHL YTKQGFGNLPICMAKTHLSLSHNPEQKGVP K Q G A K T 1 0 1 0 1 1 0 2 0 1 1 1 1 1 1 0 0 0 0 0 0 0 12 0 1334.6475 P11586 P11586 855 866 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00082824 128.36 By MS/MS 4 0 3 3 2515100 2515100 0 10941 582 11498;11499;11500 27230;27231;27232 21832;21833;21834 21833 271 2 236690 0 QGFNVVVESGAGEASK KRVALSPAGVQNLVKQGFNVVVESGAGEAS GFNVVVESGAGEASKFSDDHYRVAGAQIQG K Q G S K F 2 0 1 0 0 1 2 3 0 0 0 1 0 1 0 2 0 0 0 3 0 0 16 0 1577.7686 Q13423 Q13423 85 100 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 2.8565E-07 217.68 By MS/MS 1.5 0.5 1 1 2 276730 276730 0 10942 1381 11501 27233;27234 21835 21835 1 76265 0 QGGAPDAGQE DIVSGHKKKGDDQSRQGGAPDAGQE_____ DDQSRQGGAPDAGQE_______________ R Q G Q E - 2 0 0 1 0 2 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 10 0 928.38864 P49368 P49368 536 545 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.001173 120.27 By MS/MS 9.5 0.5 1 1 2 559750 559750 0 10943 947 11502 27235;27236 21836 21836 1 18454 0 QGGGGGGGSVPGIER EILSNALKRGEIIAKQGGGGGGGSVPGIER QGGGGGGGSVPGIERMGPGIDRLGGAGMER K Q G E R M 0 1 0 0 0 1 1 8 0 1 0 0 0 0 1 1 0 0 0 1 0 0 15 0 1283.6218 P52272 P52272 389 403 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0089608 92.151 By MS/MS 5 0 1 1 8293400 8293400 0 10944 1012 11503 27237 21837 21837 1 83179 0 QGGLGPMNIPLVSDPK DSHFCHLAWVNTPKKQGGLGPMNIPLVSDP GGLGPMNIPLVSDPKRTIAQDYGVLKADEG K Q G P K R 0 0 1 1 0 1 0 3 0 1 2 1 1 0 3 1 0 0 0 1 0 0 16 0 1621.8498 Q06830 Q06830 94 109 PRDX1 Peroxiredoxin-1 yes yes 2 0.00039862 166.6 By MS/MS 8.75 0.433 1 3 4 1054700 1054700 0 10945 1297 11504;11505;11506 27238;27239;27240;27241 21838;21839;21840;21841;21842 21840 776 3 20065 0 QGGPTYYIDTNALR DDGSTLMEIDGDKGKQGGPTYYIDTNALRV KQGGPTYYIDTNALRVPRENMEAISPLKNG K Q G L R V 1 1 1 1 0 1 0 2 0 1 1 0 0 0 1 0 2 0 2 0 0 0 14 0 1567.7631 O96019 O96019 63 76 ACTL6A Actin-like protein 6A yes yes 2 0.0075428 96.82 By MS/MS 7 0 1 1 1202800 1202800 0 10946 438 11507 27242 21843 21843 1 18882 0 QGHIVAISSIQGK VALTKALLPSMIKRRQGHIVAISSIQGKMS RRQGHIVAISSIQGKMSIPFRSAYAASKHA R Q G G K M 1 0 0 0 0 2 0 2 1 3 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1336.7463 Q6IAN0 Q6IAN0 186 198 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2;3 0.0050579 103.43 By MS/MS 8 0 2 2 3040800 3040800 0 10947 1681 11508 27243;27244 21844;21845 21845 2 38390 0 QGIVPPGLTENELWR NEQLESARKIVHDYRQGIVPPGLTENELWR QGIVPPGLTENELWRAKYIYDSAFHPDTGE R Q G W R A 0 1 1 0 0 1 2 2 0 1 2 0 0 0 2 0 1 1 0 1 0 0 15 0 1707.8944 Q9H9B4 Q9H9B4 56 70 SFXN1 Sideroflexin-1 yes yes 2 0.00094147 124.48 By MS/MS 8 0 1 1 1006800 1006800 0 10948 2485 11509 27245 21846 21846 1 12711 0 QGKLEAAHTLEDCASR TVNTTLRSLGALYRRQGKLEAAHTLEDCAS GKLEAAHTLEDCASRNRKQGLDPASQTKVV R Q G S R N 3 1 0 1 1 1 2 1 1 0 2 1 0 0 0 1 1 0 0 0 0 0 16 1 1784.8475 Q9H0B6 Q9H0B6 462 477 KLC2 Kinesin light chain 2 yes yes 3 0.022978 71.316 By MS/MS 5 0 1 1 786940 786940 0 10949 2405 11510 27246 21847 21847 1 7892.6 0 QGLDPASQTK EAAHTLEDCASRNRKQGLDPASQTKVVELL SRNRKQGLDPASQTKVVELLKDGSGRRGDR K Q G T K V 1 0 0 1 0 2 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 0 1043.5247 Q9H0B6 Q9H0B6 481 490 KLC2 Kinesin light chain 2 yes yes 2 0.032691 80.688 By MS/MS 5 0 1 1 452020 452020 0 10950 2405 11511 27247 21848 21848 1 4533.6 0 QGLISAAQYYK EARFSEFKSHSGEFRQGLISAAQYYKSCRD GEFRQGLISAAQYYKSCRDLLGENFQKVFN R Q G Y K S 2 0 0 0 0 2 0 1 0 1 1 1 0 0 0 1 0 0 2 0 0 0 11 0 1240.6452 Q86UK7 Q86UK7 787 797 ZNF598 Zinc finger protein 598 yes yes 2 0.00066482 128.27 By MS/MS 4 0 1 1 1609700 1609700 0 10951 1821 11512 27248 21849 21849 1 151490 0 QGNLFDFLR QWDRITRLEKGKIYRQGNLFDFLRLTEWRG KGKIYRQGNLFDFLRLTEWRGPRVLYFGDH R Q G L R L 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 Q9H857 Q9H857 336 344 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.00078147 138.06 By MS/MS 6 0.816 1 1 1 3 2533700 2533700 0 10952 2472 11513 27249;27250;27251 21850 21850 1 17833 0 QGNLSSQVPLK QALTEIQEFISFISKQGNLSSQVPLKRLLN FISKQGNLSSQVPLKRLLNTWTNRYPDAKM K Q G L K R 0 0 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 11 0 1169.6404 P78527 P78527 3148 3158 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0027619 109.83 By MS/MS 2 0.816 1 1 1 3 1164800 1164800 0 10953 1225 11514 27252;27253;27254 21851 21851 1 219460 0 QGNLSSQVPLKR QALTEIQEFISFISKQGNLSSQVPLKRLLN ISKQGNLSSQVPLKRLLNTWTNRYPDAKMD K Q G K R L 0 1 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1325.7415 P78527 P78527 3148 3159 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0019726 125.71 By MS/MS 2 0.816 1 1 1 3 0 0 0 10954 1225 11515 27255;27256;27257 21852;21853;21854 21852 0 0 0 QGNLSSSGNQEGSQKR TVKCRHGSNSRRLGRQGNLSSSGNQEGSQK GNLSSSGNQEGSQKRYHRSSCGHSWSGGKD R Q G K R Y 0 1 2 0 0 3 1 3 0 0 1 1 0 0 0 4 0 0 0 0 0 0 16 1 1675.7874 CON__Q5D862;Q5D862 CON__Q5D862 165 180 FLG2 Filaggrin-2 yes no 3 0.0018989 115.12 By matching By MS/MS 3.25 0.829 1 1 2 1 3 808310 157380 650930 + 10955 67 11516 27258;27259;27260;27261 21855 21855 1 14810 281540 QGPAETGGQGQPQGPGLR LGGQALHLRSWLLSRQGPAETGGQGQPQGP AETGGQGQPQGPGLRTRLLITGLFGAGLGG R Q G L R T 1 1 0 0 0 4 1 6 0 0 1 0 0 0 3 0 1 0 0 0 0 0 18 0 1733.8445 O43819 O43819 41 58 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 4.2072E-07 209.25 By MS/MS 8 0 2 2 2302500 2302500 0 10956 238 11517;11518 27262;27263 21856;21857 21856 1 29069 0 QGQDAIPPPDPGEQIFNLPK DANYDGKEYDPVEARQGQDAIPPPDPGEQI IPPPDPGEQIFNLPKKSHHANSPTAGAAKS R Q G P K K 1 0 1 2 0 3 1 2 0 2 1 1 0 1 5 0 0 0 0 0 0 0 20 0 2160.0851 Q15555 Q15555 174 193 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2;3 3.1727E-05 156.2 By MS/MS 7 0 2 2 1077700 1077700 0 10957 1520 11519 27264;27265 21858;21859;21860 21858 3 16917 0 QGQELSAAR REEREALERERQRRRQGQELSAARQRLQED ERQRRRQGQELSAARQRLQEDEMRRAAEER R Q G A R Q 2 1 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 958.48321 Q04323 Q04323 127 135 UBXN1 UBX domain-containing protein 1 yes yes 2 0.010366 99.802 By MS/MS 7 0 1 1 2648300 2648300 0 10958 1289 11520 27266 21861 21861 1 41573 0 QGQETAVAPSLVAPALNKPK DANYDGKDYDPVAARQGQETAVAPSLVAPA AVAPSLVAPALNKPKKPLTSSSAAPQRPIS R Q G P K K 4 0 1 0 0 2 1 1 0 0 2 2 0 0 3 1 1 0 0 2 0 0 20 1 2018.116 Q15691 Q15691 131 150 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2;3 3.8398E-06 162.88 By MS/MS 8 0 2 2 4946300 4946300 0 10959 1524 11521;11522 27267;27268 21862;21863 21862 1 62446 0 QGQGQLVTCSGAFK NLGPIVDMCVVDLERQGQGQLVTCSGAFKE RQGQGQLVTCSGAFKEGSLRIIRNGIGIHE R Q G F K E 1 0 0 0 1 3 0 3 0 0 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1479.714 Q16531 Q16531 370 383 DDB1 DNA damage-binding protein 1 yes yes 2 0.0005945 132.5 By MS/MS 3.5 0.5 1 1 2 1287300 1287300 0 10960 1549 11523 27269;27270 21864 21864 1 82806 0 QGRPVVICDKEDTETIK TYAKCQNALQQVVARQGRPVVICDKEDTET RPVVICDKEDTETIKNTKRTIKVPHSVDCL R Q G I K N 0 1 0 2 1 1 2 1 0 2 0 2 0 0 1 0 2 0 0 2 0 0 17 2 1987.0044 Q06210 Q06210 631 647 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 4 0.031629 59.634 By MS/MS 5 0 1 1 1585100 1585100 0 10961 1295 11524 27271 21865 21865 1 15898 0 QGSAQSQQQIR EHLEKELSEKSGQLRQGSAQSQQQIRGEID GQLRQGSAQSQQQIRGEIDSLRQEKDSLLK R Q G I R G 1 1 0 0 0 5 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 0 11 0 1229.6113 Q2M1P5 Q2M1P5 994 1004 KIF7 Kinesin-like protein KIF7 yes yes 2 2.6334E-05 175.33 By MS/MS 3 0 1 1 420830 420830 0 10962 1566 11525 27272 21866 21866 1 7700 0 QGSGSGQSPGHGQR GQHGSGSSQSSGYGRQGSGSGQSPGHGQRG RQGSGSGQSPGHGQRGSGSRQSPSYGRHGS R Q G Q R G 0 1 0 0 0 3 0 5 1 0 0 0 0 0 1 3 0 0 0 0 0 0 14 0 1338.6025 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1118 1131 HRNR Hornerin yes no 2 0.00012952 181.66 By MS/MS By MS/MS 4.96 2.86 3 3 3 3 2 3 1 2 2 2 14 10 5147700 1268200 3879500 + 10963 73 11526;11527 27273;27274;27275;27276;27277;27278;27279;27280;27281;27282;27283;27284;27285;27286;27287;27288;27289;27290;27291;27292;27293;27294;27295;27296 21867;21868;21869;21870;21871;21872;21873;21874;21875;21876;21877;21878;21879;21880;21881;21882;21883;21884;21885 21882 12 114630 4394700 QGTFHSQQALEYGTK VDKNTKIICQGFTGKQGTFHSQQALEYGTK QGTFHSQQALEYGTKLVGGTTPGKGGQTHL K Q G T K L 1 0 0 0 0 3 1 2 1 0 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1693.806 P53597 P53597 67 81 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.049398 67.118 By MS/MS 8 0 1 1 695260 695260 0 10964 1032 11528 27297 21886 21886 1 8777.6 0 QGTIFLAGPPLVK AYVPAMADENIIVRKQGTIFLAGPPLVKAA RKQGTIFLAGPPLVKAATGEEVSAEDLGGA K Q G V K A 1 0 0 0 0 1 0 2 0 1 2 1 0 1 2 0 1 0 0 1 0 0 13 0 1339.7864 Q9HCC0 Q9HCC0 236 248 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00021918 160.77 By MS/MS 6 0 2 2 945480 945480 0 10965 2512 11529;11530 27298;27299 21887;21888 21887 1 6499.4 0 QGTPLIAFSLLPHEQK LHVSEVPVSVVECFRQGTPLIAFSLLPHEQ GTPLIAFSLLPHEQKMSVLNMVVRRDPGNT R Q G Q K M 1 0 0 0 0 2 1 1 1 1 3 1 0 1 2 1 1 0 0 0 0 0 16 0 1777.9727 Q2NL82 Q2NL82 575 590 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 0.00068167 142.39 By MS/MS 4 0 1 1 0 0 0 10966 1570 11531 27300 21889;21890 21890 0 0 0 QGTVYAQVK HTCVKFYIEGSEPGKQGTVYAQVKENPGSG GSEPGKQGTVYAQVKENPGSGEYDFRYIFV K Q G V K E 1 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 1 0 1 2 0 0 9 0 992.5291 Q9BVV7 Q9BVV7 205 213 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.00096326 134.48 By MS/MS 9.5 0.5 1 1 2 1387400 1387400 0 10967 2341 11532 27301;27302 21891 21891 1 30091 0 QGTYGGYFR LGSLVENNERVFDHKQGTYGGYFRDQKDGY RVFDHKQGTYGGYFRDQKDGYRKNEGYMRR K Q G F R D 0 1 0 0 0 1 0 3 0 0 0 0 0 1 0 0 1 0 2 0 0 0 9 0 1047.4774 Q99613;B5ME19 Q99613 878 886 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0015896 126.52 By MS/MS 5.11 2.77 1 1 1 1 1 1 1 1 1 9 35414000 35414000 0 10968 2252 11533 27303;27304;27305;27306;27307;27308;27309;27310;27311 21892;21893;21894;21895;21896;21897;21898 21893 7 2695600 0 QGTYGGYFRDQK LGSLVENNERVFDHKQGTYGGYFRDQKDGY DHKQGTYGGYFRDQKDGYRKNEGYMRRGGY K Q G Q K D 0 1 0 1 0 2 0 3 0 0 0 1 0 1 0 0 1 0 2 0 0 0 12 1 1418.6579 Q99613;B5ME19 Q99613 878 889 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.021768 105.13 By MS/MS 4 0 1 1 0 0 0 10969 2252 11534 27312 21899 21899 0 0 0 QGVALQYLGR KARLLNPKWPKAYFRQGVALQYLGRHADAL KAYFRQGVALQYLGRHADALAAFASGLAQD R Q G G R H 1 1 0 0 0 2 0 2 0 0 2 0 0 0 0 0 0 0 1 1 0 0 10 0 1103.6087 Q96AY4 Q96AY4 132 141 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.026733 93.143 By MS/MS 2 0 1 1 0 0 0 10970 2110 11535 27313 21900 21900 1 0 0 QGVCIGLSEIMK PILEEGLRSQKSDERQGVCIGLSEIMKSTS DERQGVCIGLSEIMKSTSRDAVLYFSESLV R Q G M K S 0 0 0 0 1 1 1 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1333.6734 Q92616 Q92616 1981 1992 GCN1L1 Translational activator GCN1 yes yes 2 0.00016076 152.69 By MS/MS 2 0 2 2 1182700 1182700 0 10971 2064 11536;11537 27314;27315 21901;21902 21901 1000 2 400030 0 QGVDADINGLR LDDFRIKFEMEQNLRQGVDADINGLRQVLD QNLRQGVDADINGLRQVLDNLTMEKSDLEM R Q G L R Q 1 1 1 2 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1156.5836 P35527;CON__P35527 P35527 251 261 KRT9 Keratin, type I cytoskeletal 9 yes no 2 9.9619E-06 173.24 By MS/MS By MS/MS 5.23 2.97 4 3 3 5 3 2 2 2 4 3 15 16 180450000 102230000 78226000 + 10972 822 11538;11539 27316;27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327;27328;27329;27330;27331;27332;27333;27334;27335;27336;27337;27338;27339;27340;27341;27342;27343;27344;27345;27346 21903;21904;21905;21906;21907;21908;21909;21910;21911;21912;21913;21914;21915;21916;21917;21918;21919;21920;21921;21922;21923;21924 21916 17 9885600 42276000 QGVEDAFYTLVR KSYGIPFIETSAKTRQGVEDAFYTLVREIR KTRQGVEDAFYTLVREIRQYRMKKLNSSDD R Q G V R E 1 1 0 1 0 1 1 1 0 0 1 0 0 1 0 0 1 0 1 2 0 0 12 0 1396.6987 P01111;P01112 P01111 150 161 NRAS;HRAS GTPase NRas;GTPase HRas;GTPase HRas, N-terminally processed yes no 2 0.0023466 135.8 By MS/MS 9 0 1 1 117110 117110 0 10973 450 11540 27347 21925 21925 1 2304.8 0 QGVLEHILS SQHFLPRWKCEQLIRQGVLEHILS______ CEQLIRQGVLEHILS_______________ R Q G L S - 0 0 0 0 0 1 1 1 1 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 994.54475 Q14691 Q14691 188 196 GINS1 DNA replication complex GINS protein PSF1 yes yes 2 0.0023078 117.4 By MS/MS 9 0 1 1 366960 366960 0 10974 1452 11541 27348 21926 21926 1 7221.8 0 QGVLGIK VNYYVDTAVRHVLLRQGVLGIKVKIMLPWD AVRHVLLRQGVLGIKVKIMLPWDPTGKIGP R Q G I K V 0 0 0 0 0 1 0 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 713.44357 P23396 P23396 179 185 RPS3 40S ribosomal protein S3 yes yes 2 0.044027 94.163 By MS/MS 8.5 0.5 1 1 2 25590000 25590000 0 10975 703 11542 27349;27350 21927 21927 1 327360 0 QGVLTHGR VRISGGNDKQGFPMKQGVLTHGRVRLLLSK KQGFPMKQGVLTHGRVRLLLSKGHSCYRPR K Q G G R V 0 1 0 0 0 1 0 2 1 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 866.47225 P62753 P62753 65 72 RPS6 40S ribosomal protein S6 yes yes 2 0.044052 90.601 By MS/MS 7.67 0.471 1 2 3 15475000 15475000 0 10976 1169 11543;11544 27351;27352;27353 21928;21929 21928 1 196020 0 QGVTQVLSR ISTGNWSLKRFKMDRQGVTQVLSRLSYISA RFKMDRQGVTQVLSRLSYISALGMMTRISS R Q G S R L 0 1 0 0 0 2 0 1 0 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 986.55089 Q9NW08 Q9NW08 434 442 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.024738 86.882 By MS/MS 3.5 0.5 1 1 2 1510400 1510400 0 10977 2607 11545 27354;27355 21930 21930 1 63186 0 QHEADADLINAGK LQSENGVLGLGPYPRQHEADADLINAGKET PRQHEADADLINAGKETVTILPGASFFSSD R Q H G K E 3 0 1 2 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 13 0 1380.6634 P55809 P55809 356 368 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 0.027383 80.737 By MS/MS 6 0 1 1 1386600 1386600 0 10978 1063 11546 27356 21931 21931 1 9531.7 0 QHLEITGGQVR TPGYVVTPHTMNLLKQHLEITGGQVRTRFP NLLKQHLEITGGQVRTRFPPEPNGILHIGH K Q H V R T 0 1 0 0 0 2 1 2 1 1 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1236.6575 P47897 P47897 255 265 QARS Glutamine--tRNA ligase yes yes 2;3 0.00055732 130.41 By MS/MS 4.5 0.5 2 2 4 5026400 5026400 0 10979 928 11547 27357;27358;27359;27360 21932;21933 21932 2 405630 0 QHLLGTSPER VSLRDGFVCALLRFRQHLLGTSPERVVQHL LLRFRQHLLGTSPERVVQHLCQRRVEPPEL R Q H E R V 0 1 0 0 0 1 1 1 1 0 2 0 0 0 1 1 1 0 0 0 0 0 10 0 1136.5938 Q8WUY1 Q8WUY1 153 162 THEM6 Protein THEM6 yes yes 2 0.050182 72.243 By MS/MS 9 0 1 1 610990 610990 0 10980 2019 11548 27361 21934 21934 1 12024 0 QHLPLIK LEQVIAKDLLPSRDRQHLPLIKMKPVPDLV DLLPSRDRQHLPLIKMKPVPDLVPGNFKSQ R Q H I K M 0 0 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 0 0 0 0 0 7 0 847.52797 P02671 P02671 219 225 FGA Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 2 0.034662 101.21 By MS/MS 5 0 2 2 5474200 5474200 0 10981 457 11549 27362;27363 21935;21936 21935 2 54904 0 QHLSSVVFIK VSRWFCHIQHYPGIRQHLSSVVFIKNRLYT YPGIRQHLSSVVFIKNRLYTNSH_______ R Q H I K N 0 0 0 0 0 1 0 0 1 1 1 1 0 1 0 2 0 0 0 2 0 0 10 0 1156.6604 O43324 O43324 157 166 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2;3 6.1385E-05 150.15 By MS/MS 9.5 0.5 3 3 6 6454100 6454100 0 10982 204 11550;11551 27364;27365;27366;27367;27368;27369 21937;21938;21939;21940 21938 3 160680 0 QHMDITGEENPLNK AYTCLEAATGRALLRQHMDITGEENPLNKL RQHMDITGEENPLNKLRVKIEPGVDPDDTY R Q H N K L 0 0 2 1 0 1 2 1 1 1 1 1 1 0 1 0 1 0 0 0 0 0 14 0 1624.7515 Q9H4A4 Q9H4A4 381 394 RNPEP Aminopeptidase B yes yes 2 0.041842 57.785 By MS/MS 9 0 1 1 0 0 0 10983 2444 11552 27370 21941 21941 0 0 0 QHPQPYIFPDSPGGTSYER ATQLLKEAEEEFWYRQHPQPYIFPDSPGGT PYIFPDSPGGTSYERYDCYKVPEWCLDDWH R Q H E R Y 0 1 0 1 0 2 1 2 1 1 0 0 0 1 4 2 1 0 2 0 0 0 19 0 2175.0021 Q9Y6M9 Q9Y6M9 75 93 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 3 0.0002343 117.53 By MS/MS 9 0 1 1 852790 852790 0 10984 2948 11553 27371 21942 21942 1 16783 0 QHPVPPPAQNQNQVR FTYAQQREKPRVQEKQHPVPPPAQNQNQVR QHPVPPPAQNQNQVRSPGAPGPLTLKEVEE K Q H V R S 1 1 2 0 0 4 0 0 1 0 0 0 0 0 4 0 0 0 0 2 0 0 15 0 1708.8757 Q15942 Q15942 329 343 ZYX Zyxin yes yes 3 2.793E-09 173.76 By MS/MS 5 0 1 1 1422200 1422200 0 10985 1541 11554 27372 21943 21943 0 14264 0 QHTFVETESVR EGLLAAFPKLMNTGKQHTFVETESVRYVYQ NTGKQHTFVETESVRYVYQPMEKLYMVLIT K Q H V R Y 0 1 0 0 0 1 2 0 1 0 0 0 0 1 0 1 2 0 0 2 0 0 11 0 1331.647 P48444 P48444 45 55 ARCN1 Coatomer subunit delta yes yes 3 0.012982 88.155 By MS/MS 5.5 0.5 1 1 2 5373500 5373500 0 10986 934 11555 27373;27374 21944 21944 1 37506 0 QHTTFSAESSR LTRPGSFLLTSTSGRQHTTFSAESSRSLLI TSGRQHTTFSAESSRSLLICLLWVLKNADE R Q H S R S 1 1 0 0 0 1 1 0 1 0 0 0 0 1 0 3 2 0 0 0 0 0 11 0 1249.5687 Q96N67 Q96N67 1316 1326 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 0.002553 117.95 By MS/MS 2.8 0.748 2 2 1 5 2635100 2635100 0 10987 2201 11556 27375;27376;27377;27378;27379 21945;21946 21946 2 690580 0 QHVPEQHPK EEPDPKMVELAKYAKQHVPEQHPKDKPSFV LAKYAKQHVPEQHPKDKPSFVRARVKKLLA K Q H P K D 0 0 0 0 0 2 1 0 2 0 0 1 0 0 2 0 0 0 0 1 0 0 9 0 1098.557 Q9H3U1 Q9H3U1 618 626 UNC45A Protein unc-45 homolog A yes yes 2 0.024046 87.181 By MS/MS 4.5 0.5 1 1 2 527130 527130 0 10988 2442 11557 27380;27381 21947 21947 1 43749 0 QIAASSQDSVGR SLSTSKLNSLAIGLRQIAASSQDSVGRVLR GLRQIAASSQDSVGRVLRRTRIAKNLELEQ R Q I G R V 2 1 0 1 0 2 0 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 12 0 1217.6 P54886 P54886 442 453 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 1.3762E-05 174.57 By MS/MS By MS/MS 4.09 1.44 1 1 1 2 5 1 9 2 37595000 36956000 639740 10989 1048 11558;11559 27382;27383;27384;27385;27386;27387;27388;27389;27390;27391;27392 21948;21949;21950;21951;21952;21953;21954 21948 6 630060 537250 QIAEEDFYEK DDESGAGELTREELRQIAEEDFYEKLAASI REELRQIAEEDFYEKLAASIAPEIYGHEDV R Q I E K L 1 0 0 1 0 1 3 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 10 0 1270.5717 P33993 P33993 326 335 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.001453 114.86 By MS/MS 4.5 0.5 1 1 2 4831800 4831800 0 10990 808 11560 27393;27394 21955;21956 21955 2 176970 0 QIAQLQDFVR ELTYIIKQDINSLNKQIAQLQDFVRAKGSQ NSLNKQIAQLQDFVRAKGSQSGRHLQTHSN K Q I V R A 1 1 0 1 0 3 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1216.6564 Q13190 Q13190 149 158 STX5 Syntaxin-5 yes yes 2 6.4448E-05 156.35 By MS/MS 7.5 0.5 2 2 4 6097000 6097000 0 10991 1364 11561;11562 27395;27396;27397;27398 21957;21958 21957 1 94287 0 QICAFSDVLPVLSMK FISEATVEKLQPENRQICAFSDVLPVLSMK QICAFSDVLPVLSMKHTKDRVGQNLPRCGI R Q I M K H 1 0 0 1 1 1 0 0 0 1 2 1 1 1 1 2 0 0 0 2 0 0 15 0 1706.8735 Q9Y312 Q9Y312 154 168 AAR2 Protein AAR2 homolog yes yes 2 0.00072188 128.21 By MS/MS 7 0 1 1 43504 43504 0 10992 2853 11563 27399 21959 21959 1189 1 682.93 0 QICVVMLESPPK VTISGTPDAIIQCVKQICVVMLESPPKGAT CVKQICVVMLESPPKGATIPYRPKPASTPV K Q I P K G 0 0 0 0 1 1 1 0 0 1 1 1 1 0 2 1 0 0 0 2 0 0 12 0 1399.7203 P57721 P57721 193 204 PCBP3 Poly(rC)-binding protein 3 yes yes 2 0.014001 103.08 By MS/MS 7 0 1 1 0 0 0 10993 1080 11564 27400 21960 21960 1 0 0 QIDAPGDPFPLNPR NRLLHIVGYGDFQMKQIDAPGDPFPLNPRG KQIDAPGDPFPLNPRGIKPQKDPDMAMEIC K Q I P R G 1 1 1 2 0 1 0 1 0 1 1 0 0 1 4 0 0 0 0 0 0 0 14 0 1535.7732 Q2NL82 Q2NL82 301 314 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 4.1725E-05 190.36 By MS/MS 5 1.22 2 1 1 4 5240700 5240700 0 10994 1570 11565;11566 27401;27402;27403;27404 21961;21962;21963;21964 21961 3 421780 0 QIDQFLVVAR MEMKVWDPDNPLTDRQIDQFLVVARAVGTF PLTDRQIDQFLVVARAVGTFARALDCSSSI R Q I A R A 1 1 0 1 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1187.6663 Q13330;Q9BTC8;O94776 O94776 189 198 MTA1;MTA3;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3;Metastasis-associated protein MTA2 no no 2 9.9415E-08 209.73 By MS/MS 6 0.816 1 1 1 3 4842600 4842600 0 10995 365;1371 11567 27405;27406;27407 21965 21965 1 44959 0 QIEEFNIGKR PTSKRETYTEDFIKKQIEEFNIGKRHLANM DFIKKQIEEFNIGKRHLANMMGEDPETFTQ K Q I K R H 0 1 1 0 0 1 2 1 0 2 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1232.6513 P82933 P82933 77 86 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.00011199 159.58 By MS/MS By matching 7 0 3 2 1 7086600 7086600 0 10996 1239 11568;11569 27408;27409;27410 21966;21967 21966 1 111250 0 QIEHCEGR KQETWMLMELQKIRRQIEHCEGRMTLKNLP ELQKIRRQIEHCEGRMTLKNLPLADQGSSH R Q I G R M 0 1 0 0 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1027.4505 P15924 P15924 678 685 DSP Desmoplakin yes yes 2 0.025838 93.162 By MS/MS 2 0 1 1 287240 287240 0 10997 628 11570 27411 21968 21968 1 97156 0 QIENVLR DGNNQLVIKGRFQQKQIENVLRRYIKEYVT IKGRFQQKQIENVLRRYIKEYVTCHTCRSP K Q I L R R 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 870.49232 P20042 P20042 266 272 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.043702 94.407 By MS/MS 6 0 1 1 10939000 10939000 0 10998 668 11571 27412 21969 21969 1 75199 0 QIENVLRR DGNNQLVIKGRFQQKQIENVLRRYIKEYVT KGRFQQKQIENVLRRYIKEYVTCHTCRSPD K Q I R R Y 0 2 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 1 1026.5934 P20042 P20042 266 273 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.026452 92.47 By MS/MS 6 0 1 1 0 0 0 10999 668 11572 27413 21970 21970 0 0 0 QIFIGPPDIK DILDPALLRPGRFDRQIFIGPPDIKGRASI GRFDRQIFIGPPDIKGRASIFKVHLRPLKL R Q I I K G 0 0 0 1 0 1 0 1 0 3 0 1 0 1 2 0 0 0 0 0 0 0 10 0 1126.6386 Q9Y4W6 Q9Y4W6 472 481 AFG3L2 AFG3-like protein 2 yes yes 2 0.0093409 95.815 By MS/MS 5.5 0.5 1 1 2 2545500 2545500 0 11000 2902 11573 27414;27415 21971 21971 1 24586 0 QIFLGGVDK FPTQALNFAFKDKYKQIFLGGVDKRTQFWL FKDKYKQIFLGGVDKRTQFWLYFAGNLASG K Q I D K R 0 0 0 1 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 975.53893 P05141;P12236 P05141 97 105 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 1;2 0.0022754 117.81 By MS/MS By matching 5.62 3.09 3 2 2 1 2 1 2 3 3 2 20 1 116530000 116460000 65606 11001 487;589 11574;11575 27416;27417;27418;27419;27420;27421;27422;27423;27424;27425;27426;27427;27428;27429;27430;27431;27432;27433;27434;27435;27436 21972;21973;21974;21975;21976;21977;21978;21979;21980 21975 5 5493900 65606 QIFLGGVDKR FPTQALNFAFKDKYKQIFLGGVDKRTQFWL KDKYKQIFLGGVDKRTQFWLYFAGNLASGG K Q I K R T 0 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 1 1131.64 P05141 P05141 97 106 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.00010191 177.3 By MS/MS 5.68 2.92 3 3 3 3 3 2 3 4 4 3 31 183250000 183250000 0 11002 487 11576;11577 27437;27438;27439;27440;27441;27442;27443;27444;27445;27446;27447;27448;27449;27450;27451;27452;27453;27454;27455;27456;27457;27458;27459;27460;27461;27462;27463;27464;27465;27466;27467 21981;21982;21983;21984;21985;21986;21987;21988;21989;21990;21991;21992;21993;21994;21995;21996;21997;21998;21999;22000;22001;22002;22003;22004;22005 21981 16 6290200 0 QIFNGTFVK VSPKVRKVLQLLRLRQIFNGTFVKLNKASI QLLRLRQIFNGTFVKLNKASINMLRIVEPY R Q I V K L 0 0 1 0 0 1 0 1 0 1 0 1 0 2 0 0 1 0 0 1 0 0 9 0 1052.5655 P18124 P18124 116 124 RPL7 60S ribosomal protein L7 yes yes 2 0.012679 95.741 By MS/MS 7.5 1.12 1 1 1 1 4 8800500 8800500 0 11003 652 11578 27468;27469;27470;27471 22006 22006 1 83091 0 QIFPVLDCKDDLR AHADDLFPFFLRHAKQIFPVLDCKDDLRKI AKQIFPVLDCKDDLRKISDLRIPPNWYPDA K Q I L R K 0 1 0 3 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 13 1 1617.8185 Q8IYB8 Q8IYB8 168 180 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.010408 112.13 By MS/MS 5 0 1 1 0 0 0 11004 1885 11579 27472 22007 22007 0 0 0 QIGENLIVPGGVK QSFYADIYMEDGLIKQIGENLIVPGGVKTI IKQIGENLIVPGGVKTIEAHSRMVIPGGID K Q I V K T 0 0 1 0 0 1 1 3 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1322.7558 Q14194;Q16555 Q16555 44 56 CRMP1;DPYSL2 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 2 no no 2 0.0005167 134.84 By MS/MS 5 0 1 1 1032500 1032500 0 11005 1552;1430 11580 27473 22008 22008 1 10355 0 QIGVEHVVVYVNK DGPMPQTREHLLLARQIGVEHVVVYVNKAD ARQIGVEHVVVYVNKADAVQDSEMVELVEL R Q I N K A 0 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 1 5 0 0 13 0 1482.8195 P49411 P49411 170 182 TUFM Elongation factor Tu, mitochondrial yes yes 2 2.2934E-06 201.84 By MS/MS By matching 7 0 3 2 1 7330500 7330500 0 11006 949 11581;11582 27474;27475;27476 22009;22010 22009 1 115080 0 QIHKFEELNR ADTKVARRYGDFFIRQIHKFEELNRTLKKM DFFIRQIHKFEELNRTLKKMGQRP______ R Q I N R T 0 1 1 0 0 1 2 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 10 1 1312.6888 Q9Y262 Q9Y262 546 555 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 6.8049E-08 190.62 By MS/MS 6.09 2.54 1 1 1 2 5 4 2 1 1 4 22 83459000 83459000 0 11007 2814 11583;11584 27477;27478;27479;27480;27481;27482;27483;27484;27485;27486;27487;27488;27489;27490;27491;27492;27493;27494;27495;27496;27497;27498 22011;22012;22013;22014;22015;22016;22017;22018;22019;22020;22021 22015 4 1265700 0 QIHQQLYDR PVTDHLDEQAVQGLKQIHQQLYDRQLYRGL AVQGLKQIHQQLYDRQLYRGLGGQLMRQAV K Q I D R Q 0 1 0 1 0 3 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1199.6047 Q9BTW9 Q9BTW9 657 665 TBCD Tubulin-specific chaperone D yes yes 3 0.038005 70.1 By MS/MS 3.5 0.5 1 1 2 620260 620260 0 11008 2319 11585 27499;27500 22022 22022 1 26672 0 QIIDDFITR INRPADVIQARGMKKQIIDDFITRNKYLLA ARGMKKQIIDDFITRNKYLLAARLTSQKLF K Q I T R N 0 1 0 2 0 1 0 0 0 3 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1119.5924 Q9Y2G8 Q9Y2G8 348 356 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 0.029507 80.455 By MS/MS 4.5 0.5 1 1 2 1371900 1371900 0 11009 2827 11586 27501;27502 22023;22024 22024 2 100960 0 QIIGQAK ______________________________ ______________________________ R Q I A K K 1 0 0 0 0 2 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 7 0 756.44939 O00483 O00483 4 10 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.026239 107.55 By MS/MS 10 0 1 1 7004200 7004200 0 11010 109 11587 27503 22025 22025 1 377500 0 QIILEKEETEELKR LLPSDTKRSQIYGSRQIILEKEETEELKRF RQIILEKEETEELKRFDDPGLMLMGFKPLV R Q I K R F 0 1 0 0 0 1 5 0 0 2 2 2 0 0 0 0 1 0 0 0 0 0 14 2 1756.9571 P12956 P12956 326 339 XRCC6 X-ray repair cross-complementing protein 6 yes yes 3 0.00028987 146.84 By MS/MS 5 0 2 2 6069400 6069400 0 11011 596 11588;11589 27504;27505 22026;22027 22027 1 60873 0 QIIVDPLSFSEER GGGGELAYALNNFDKQIIVDPLSFSEERFR DKQIIVDPLSFSEERFRPSLEERLESIISG K Q I E R F 0 1 0 1 0 1 2 0 0 2 1 0 0 1 1 2 0 0 0 1 0 0 13 0 1531.7882 P35221 P35221 288 300 CTNNA1 Catenin alpha-1 yes yes 2 0.00036812 145.28 By MS/MS 4 0 2 2 752090 752090 0 11012 812 11590;11591 27506;27507 22028;22029 22028 1 70777 0 QIKLDPSPQTIYK SFLFPLLKLEKELLKQIKLDPSPQTIYKWI LKQIKLDPSPQTIYKWIKDNISPKLHVDKG K Q I Y K W 0 0 0 1 0 2 0 0 0 2 1 2 0 0 2 1 1 0 1 0 0 0 13 1 1529.8453 P78344 P78344 740 752 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.015324 107.03 By MS/MS 4 0 1 1 0 0 0 11013 1219 11592 27508 22030 22030 0 0 0 QILNIIER LRDEGHQTLVFSQSRQILNIIERLLKNRHF LVFSQSRQILNIIERLLKNRHFKTLRIDGT R Q I E R L 0 1 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 8 0 997.59203 Q2NKX8 Q2NKX8 487 494 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.0053054 124.08 By MS/MS 3 0 1 1 388130 388130 0 11014 1569 11593 27509 22031 22031 1 7101.7 0 QINDIQLSR AKSGEVLVNVKEHSRQINDIQLSRDMTMFV VKEHSRQINDIQLSRDMTMFVTASKDNTAK R Q I S R D 0 1 1 1 0 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1085.5829 Q13347 Q13347 190 198 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.00010468 161.27 By MS/MS By MS/MS 7.57 0.728 4 2 1 5 2 87702000 87702000 0 11015 1372 11594;11595 27510;27511;27512;27513;27514;27515;27516 22032;22033;22034;22035;22036 22034 3 1321700 0 QINELENGGEILNETR SIRFLAKAIDYEIQRQINELENGGEILNET INELENGGEILNETRSFHHKLGCTMSMRDK R Q I T R S 0 1 3 0 0 1 4 2 0 2 2 0 0 0 0 0 1 0 0 0 0 0 16 0 1827.8963 O75879 O75879 299 314 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 9.0499E-38 321.78 By MS/MS 6 0 1 1 0 0 0 11016 351 11596 27517 22037 22037 1 0 0 QINLSNIR IIVRGQPRGGPPPERQINLSNIRAGNLARR GGPPPERQINLSNIRAGNLARRAAATQPDA R Q I I R A 0 1 2 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 956.54033 Q7KZF4 Q7KZF4 48 55 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 1;2 0.026975 91.9 By MS/MS 3.17 1.34 1 1 1 2 1 6 4649700 4649700 0 11017 1755 11597;11598 27518;27519;27520;27521;27522;27523 22038;22039 22038 1 472750 0 QINWTVLYR NAKCESAFLSKRNPRQINWTVLYRRKHKKG SKRNPRQINWTVLYRRKHKKGQSEEIQKKR R Q I Y R R 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 1 1 1 1 0 0 9 0 1191.64 P83731 P83731 48 56 RPL24 60S ribosomal protein L24 yes yes 2 0.040851 79.906 By MS/MS 9 0 1 1 114330 114330 0 11018 1241 11599 27524 22040 22040 1 2250.1 0 QIQNLQK FLREYFERLEKEEAKQIQNLQKAGTRTDSR RLEKEEAKQIQNLQKAGTRTDSREDEISPP K Q I Q K A 0 0 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 870.49232 P10644 P10644 64 70 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 0.0091709 138.53 By MS/MS By matching 6.33 0.471 2 1 2 1 5810400 5672700 137690 11019 567 11600 27525;27526;27527 22041 22041 1 44556 141090 QIQVLQAQLQR EERKAYRNQVEESTKQIQVLQAQLQRLHID ESTKQIQVLQAQLQRLHIDTENLREEKDSE K Q I Q R L 1 1 0 0 0 5 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1323.7623 Q14BN4 Q14BN4 544 554 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.0069781 93.598 By MS/MS 4 0 1 1 0 0 0 11020 1465 11601 27528 22042 22042 0 0 0 QIQVNDEDVR TKDYKKTIGVDFLERQIQVNDEDVRLMLWD DFLERQIQVNDEDVRLMLWDTAGQEEFDAI R Q I V R L 0 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 10 0 1214.5891 Q9ULC3 Q9ULC3 50 59 RAB23 Ras-related protein Rab-23 yes yes 2 5.9862E-08 196.79 By MS/MS 8 0 1 1 800750 800750 0 11021 2772 11602 27529 22043 22043 1 10109 0 QISDLMGLIPK TSASSLARAYSIVIRQISDLMGLIPKYNHL IVIRQISDLMGLIPKYNHLVYSQIPAAVKL R Q I P K Y 0 0 0 1 0 1 0 1 0 2 2 1 1 0 1 1 0 0 0 0 0 0 11 0 1213.674 O95071 O95071 1794 1804 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.019441 83.647 By MS/MS 2 0 1 1 0 0 0 11022 384 11603 27530 22044 22044 152 1 0 0 QISGQYSGSPQLLK FAQKISRTVAAEVRKQISGQYSGSPQLLKN KQISGQYSGSPQLLKNLNIVGNISHHTTVP K Q I L K N 0 0 0 0 0 3 0 2 0 1 2 1 0 0 1 3 0 0 1 0 0 0 14 0 1504.7886 Q96N67 Q96N67 22 35 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 1.3743E-07 218.94 By MS/MS 2 0 1 1 733680 733680 0 11023 2201 11604 27531 22045 22045 1 248160 0 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1715.8438 CON__P04264;P04264 P04264 418 432 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 9.5659E-56 397.21 By MS/MS By MS/MS 4.53 2.62 6 5 4 5 5 3 3 4 2 1 24 14 108780000 79072000 29710000 + 11024 471;45 11605;11606 27532;27533;27534;27535;27536;27537;27538;27539;27540;27541;27542;27543;27544;27545;27546;27547;27548;27549;27550;27551;27552;27553;27554;27555;27556;27557;27558;27559;27560;27561;27562;27563;27564;27565;27566;27567;27568;27569 22046;22047;22048;22049;22050;22051;22052;22053;22054;22055;22056;22057;22058;22059;22060;22061;22062;22063;22064;22065;22066;22067;22068;22069;22070;22071;22072;22073;22074;22075;22076 22061 25 5082000 10286000 QISQAYEVLSDAK KYHPDKNPNEGEKFKQISQAYEVLSDAKKR FKQISQAYEVLSDAKKRELYDKGGEQAIKE K Q I A K K 2 0 0 1 0 2 1 0 0 1 1 1 0 0 0 2 0 0 1 1 0 0 13 0 1450.7304 P31689 P31689 47 59 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 1.1747E-24 287.76 By MS/MS By MS/MS 7.38 1.41 3 2 1 1 1 7 1 54822000 54778000 43896 11025 787 11607;11608 27570;27571;27572;27573;27574;27575;27576;27577 22077;22078;22079;22080;22081;22082;22083;22084 22078 6 574700 44981 QISSLRDEVEAK AVEQQIQSHRETHQKQISSLRDEVEAKAKL HQKQISSLRDEVEAKAKLITDLQDQNQKMM K Q I A K A 1 1 0 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 1 1373.7151 P33176 P33176 715 726 KIF5B Kinesin-1 heavy chain yes yes 2 0.039084 94.767 By MS/MS 4 0 1 1 0 0 0 11026 800 11609 27578 22085 22085 0 0 0 QISTLESVSTSK MKNNPVHLITEEDLKQISTLESVSTSKKDK DLKQISTLESVSTSKKDKKDERRRKATEGS K Q I S K K 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 4 2 0 0 1 0 0 12 0 1278.6667 O94874 O94874 403 414 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00037143 139.31 By MS/MS 4 0 1 1 3942900 3942900 0 11027 372 11610 27579 22086 22086 1 371050 0 QITADKQYK IERVKLLLQVQHASKQITADKQYKGIIDCV VQHASKQITADKQYKGIIDCVVRIPKEQGV K Q I Y K G 1 0 0 1 0 2 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 0 9 1 1093.5768 P05141 P05141 44 52 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 5.6406E-08 176.44 By MS/MS 8.33 0.471 2 1 3 0 0 0 11028 487 11611;11612 27580;27581;27582 22087;22088 22088 1 0 0 QITEDTVEFGS EYYLHMDGRGNYEFKQITEDTVEFGS____ YEFKQITEDTVEFGS_______________ K Q I G S - 0 0 0 1 0 1 2 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 11 0 1224.551 P28288 P28288 649 659 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.00076649 126.24 By MS/MS 5 0 1 1 2471900 2471900 0 11029 752 11613 27583 22089 22089 1 24792 0 QITIEEGEQR IIMLVGNKTDLADKRQITIEEGEQRAKELS LADKRQITIEEGEQRAKELSVMFIETSAKT R Q I Q R A 0 1 0 0 0 2 3 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1201.5939 Q9NRW1 Q9NRW1 135 144 RAB6B Ras-related protein Rab-6B yes yes 2 0.00021808 145.9 By MS/MS 9 0 1 1 420350 420350 0 11030 2558 11614 27584 22090 22090 1 8272.6 0 QITLNDLPVGR TLRGLFIIDDKGILRQITLNDLPVGRSVDE GILRQITLNDLPVGRSVDETLRLVQAFQYT R Q I G R S 0 1 1 1 0 1 0 1 0 1 2 0 0 0 1 0 1 0 0 1 0 0 11 0 1224.6826 Q13162 Q13162 213 223 PRDX4 Peroxiredoxin-4 yes yes 2 1.2599E-09 245.5 By MS/MS 9 0.816 2 2 2 6 6807100 6807100 0 11031 1361 11615;11616 27585;27586;27587;27588;27589;27590 22091;22092;22093;22094;22095;22096 22091 3 131900 0 QITPQQQEK FCGRCIREFLKWSIKQITPQQQEKSPVNTK LKWSIKQITPQQQEKSPVNTKSLFKRLYSL K Q I E K S 0 0 0 0 0 4 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 9 0 1098.5669 P78527 P78527 1043 1051 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 8.8451E-06 179.37 By MS/MS 2 0.816 1 1 1 3 3823700 3823700 0 11032 1225 11617 27591;27592;27593 22097;22098;22099 22097 3 930970 0 QITPSLETHLVQR PLPGYGVQYDYLDPRQITPSLETHLVQRLF PRQITPSLETHLVQRLFFAGQINGTTGYEE R Q I Q R L 0 1 0 0 0 2 1 0 1 1 2 0 0 0 1 1 2 0 0 1 0 0 13 0 1520.8311 Q9Y2Z2 Q9Y2Z2 414 426 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.00095138 134.98 By MS/MS 5 0 1 1 0 0 0 11033 2851 11618 27594 22100 22100 0 0 0 QITQSALLAEAR YDVLRGIFTSEIGTKQITQSALLAEARSDY GTKQITQSALLAEARSDYSEAAKQYDEALN K Q I A R S 3 1 0 0 0 2 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1299.7147 P78527 P78527 2951 2962 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 9.846E-25 293.88 By MS/MS By MS/MS 2.44 1.34 3 2 2 1 1 8 1 14530000 14472000 58672 11034 1225 11619;11620 27595;27596;27597;27598;27599;27600;27601;27602;27603 22101;22102;22103;22104;22105;22106;22107;22108;22109;22110 22103 5 2937600 58672 QITQVYGFYDECLR YRERITILRGNHESRQITQVYGFYDECLRK RQITQVYGFYDECLRKYGNANVWKYFTDLF R Q I L R K 0 1 0 1 1 2 1 1 0 1 1 0 0 1 0 0 1 0 2 1 0 0 14 0 1790.8298 P67775;P62714;P60510 P67775 122 135 PPP2CA;PPP2CB;PPP4C Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 4 catalytic subunit no no 2 0.036449 75.739 By MS/MS 8 0 1 1 254190 254190 0 11035 1166;1092 11621 27604 22111 22111 0 3209.1 0 QITQVYGFYDECQTK WPDRITLLRGNHESRQITQVYGFYDECQTK QITQVYGFYDECQTKYGNANAWRYCTKVFD R Q I T K Y 0 0 0 1 1 3 1 1 0 1 0 1 0 1 0 0 2 0 2 1 0 0 15 0 1878.8458 O00743 O00743 118 132 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 1.1768E-16 283.47 By MS/MS 8 0.707 1 2 1 4 3309000 3309000 0 11036 117 11622;11623 27605;27606;27607;27608 22112;22113 22112 1 43654 0 QITSYGETCPGLEQYAIK RLVPGGGATEIELAKQITSYGETCPGLEQY SYGETCPGLEQYAIKKFAEAFEAIPRALAE K Q I I K K 1 0 0 0 1 2 2 2 0 2 1 1 0 0 1 1 2 0 2 0 0 0 18 0 2056.9776 P50990 P50990 422 439 CCT8 T-complex protein 1 subunit theta yes yes 2 9.1508E-34 355.89 By MS/MS 6.83 1.34 1 2 1 1 1 6 20436000 20436000 0 11037 984 11624;11625 27609;27610;27611;27612;27613;27614 22114;22115 22114 1 147550 0 QITSYGETCPGLEQYAIKK RLVPGGGATEIELAKQITSYGETCPGLEQY YGETCPGLEQYAIKKFAEAFEAIPRALAEN K Q I K K F 1 0 0 0 1 2 2 2 0 2 1 2 0 0 1 1 2 0 2 0 0 0 19 1 2185.0725 P50990 P50990 422 440 CCT8 T-complex protein 1 subunit theta yes yes 2;3 9.5621E-12 244.23 By MS/MS 6.78 1.31 2 2 2 2 1 9 85469000 85469000 0 11038 984 11626;11627 27615;27616;27617;27618;27619;27620;27621;27622;27623 22116;22117;22118;22119;22120 22120 4 611730 0 QITVNDLPVGR SFRGLFIIDDKGILRQITVNDLPVGRSVDE GILRQITVNDLPVGRSVDETLRLVQAFQFT R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 P32119;Q06830 Q06830 141 151 PRDX2;PRDX1 Peroxiredoxin-2;Peroxiredoxin-1 no no 2 6.4722E-05 160.77 By MS/MS By MS/MS 6.8 3.02 1 1 1 2 1 3 3 3 7 8 30256000 27255000 3000900 11039 1297;796 11628;11629 27624;27625;27626;27627;27628;27629;27630;27631;27632;27633;27634;27635;27636;27637;27638 22121;22122;22123;22124;22125;22126;22127;22128;22129;22130;22131;22132 22125 10 657410 1616700 QIVSGSRDK HTKDVLSVAFSSDNRQIVSGSRDKTIKLWN FSSDNRQIVSGSRDKTIKLWNTLGVCKYTV R Q I D K T 0 1 0 1 0 1 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 9 1 988.53016 P63244 P63244 119 127 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.00043389 136.27 By MS/MS By matching 8 0 2 1 1 1292700 1282500 10150 11040 1202 11630 27639;27640 22133 22133 1 16192 13697 QIWQNLGLDDTK GGDEAAGLEADLECKQIWQNLGLDDTKILP ECKQIWQNLGLDDTKILPGNMKDNFWEMGD K Q I T K I 0 0 1 2 0 2 0 1 0 1 2 1 0 0 0 0 1 1 0 0 0 0 12 0 1429.7201 P49588 P49588 154 165 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0024959 118.9 By MS/MS 4.33 0.471 2 1 3 890200 890200 0 11041 951 11631;11632 27641;27642;27643 22134;22135 22135 1 61763 0 QKADEAYLIGR TVAIYSEQDTGQMHRQKADEAYLIGRGLAP QMHRQKADEAYLIGRGLAPVQAYLHIPDII R Q K G R G 2 1 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1262.6619 P11498 P11498 78 88 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0045048 123.11 By MS/MS 3 0 1 1 0 0 0 11042 580 11633 27644 22136 22136 0 0 0 QKASGDSARPVLLQVAESAYR LEEGTLPFNLAEAQRQKASGDSARPVLLQV SARPVLLQVAESAYRFGLGSVAGAVGATAV R Q K Y R F 4 2 0 1 0 2 1 1 0 0 2 1 0 0 1 3 0 0 1 2 0 0 21 2 2245.1815 Q9UJS0 Q9UJS0 311 331 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 3 6.6514E-06 130.73 By MS/MS 5 0 2 2 466760 466760 0 11043 2748 11634;11635 27645;27646 22137;22138 22138 1 4681.3 0 QKDEEDKAR PVVSRELQALEARIRQKDEEDKARFRGIFS LEARIRQKDEEDKARFRGIFSH________ R Q K A R F 1 1 0 2 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1117.5364 O00170 O00170 315 323 AIP AH receptor-interacting protein yes yes 2 0.019011 114.89 By MS/MS 7 0 1 1 122660 122660 0 11044 87 11636 27647 22139 22139 1 1925.6 0 QKEEESQQQAVLEQERR DEKRIQAEVEAQLARQKEEESQQQAVLEQE EEESQQQAVLEQERRDRELALRIAQSEAEL R Q K R R D 1 2 0 0 0 5 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 17 2 2114.0352 Q9UM54 Q9UM54 992 1008 MYO6 Unconventional myosin-VI yes yes 3 2.764E-07 215.09 By MS/MS 3.33 0.471 2 1 3 1065000 1065000 0 11045 2781 11637;11638 27648;27649;27650 22140;22141 22141 1 30764 0 QKEGNFDIVSGTR DLSHHPKFIPEFIRKQKEGNFDIVSGTRYK RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK K Q K T R Y 0 1 1 1 0 1 1 2 0 1 0 1 0 1 0 1 1 0 0 1 0 0 13 1 1449.7212 O60762 O60762 135 147 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2;3 0.0010275 130.69 By MS/MS 8 0 3 3 9776400 9776400 0 11046 275 11639;11640 27651;27652;27653 22142;22143;22144 22142 2 123430 0 QKEMDEAATAEER EFEKDKDDDEVFEKKQKEMDEAATAEERGR KKQKEMDEAATAEERGRLKEELEEARDIAR K Q K E R G 3 1 0 1 0 1 4 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 13 1 1506.662 Q04637 Q04637 865 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.7423E-33 303.71 By MS/MS 2 0 6 6 5681700 5681700 0 11047 1291 11641;11642;11643;11644 27654;27655;27656;27657;27658;27659 22145;22146;22147;22148;22149;22150 22147 771 4 1921800 0 QKEPFVFASVR IGAVIHYLLQVGSEKQKEPFVFASVRILGA GSEKQKEPFVFASVRILGAWLAEETSSLRK K Q K V R I 1 1 0 0 0 1 1 0 0 0 0 1 0 2 1 1 0 0 0 2 0 0 11 1 1306.7034 Q9UBB6 Q9UBB6 387 397 NCDN Neurochondrin yes yes 2 0.042993 93.839 By MS/MS 5 0 1 1 0 0 0 11048 2694 11645 27660 22151 22151 0 0 0 QKEVITAQDTVIK KNKESVNKAQEEVTKQKEVITAQDTVIKAK TKQKEVITAQDTVIKAKYAEVAKHKEQNND K Q K I K A 1 0 0 1 0 2 1 0 0 2 0 2 0 0 0 0 2 0 0 2 0 0 13 1 1471.8246 O95347 O95347 878 890 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.02879 70.563 By MS/MS 3 0 1 1 818880 818880 0 11049 405 11646 27661 22152 22152 1 14983 0 QKGADFLVTEVENGGSLGSK SKIYVDDGLISLQVKQKGADFLVTEVENGG FLVTEVENGGSLGSKKGVNLPGAAVDLPAV K Q K S K K 1 0 1 1 0 1 2 4 0 0 2 2 0 1 0 2 1 0 0 2 0 0 20 1 2035.0222 P14618 P14618 187 206 PKM Pyruvate kinase PKM yes yes 2 5.0723E-18 337.03 By MS/MS 6 0 1 1 0 0 0 11050 614 11647 27662 22153 22153 0 0 0 QKIHPTSVISGYR IIAAELLKNADELVKQKIHPTSVISGYRLA VKQKIHPTSVISGYRLACKEAVRYINENLI K Q K Y R L 0 1 0 0 0 1 0 1 1 2 0 1 0 0 1 2 1 0 1 1 0 0 13 1 1484.81 P17987 P17987 110 122 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.00016212 148.89 By MS/MS 6 0 1 1 0 0 0 11051 648 11648 27663 22154 22154 0 0 0 QKIVQAEGEAEAAK QRAQFLVEKAKQEQRQKIVQAEGEAEAAKM RQKIVQAEGEAEAAKMLGEALSKNPGYIKL R Q K A K M 4 0 0 0 0 2 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 14 1 1470.7678 Q99623 Q99623 223 236 PHB2 Prohibitin-2 yes yes 2;3 7.9732E-16 253.42 By MS/MS By matching 7.44 0.497 5 4 7 2 33821000 33758000 63145 11052 2254 11649;11650 27664;27665;27666;27667;27668;27669;27670;27671;27672 22155;22156;22157;22158;22159;22160 22158 4 476630 113720 QKKNEPGMR ______________________________ SQTSLKQKKNEPGMRSSKESLEAEKRKESD K Q K M R S 0 1 1 0 0 1 1 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 9 2 1086.5604 Q96P26 Q96P26 8 16 NT5C1B Cytosolic 5-nucleotidase 1B yes yes 2 0.0056659 95.352 By MS/MS 8 0 1 1 0 0 0 11053 2206 11651 27673 22161;22162 22162 1035 0 0 0 QKLNPADAPNPVVFVATK LASGIRSSSQPAAKRQKLNPADAPNPVVFV NPADAPNPVVFVATKDTRALRKALTHLEMR R Q K T K D 3 0 2 1 0 1 0 0 0 0 1 2 0 1 3 0 1 0 0 3 0 0 18 1 1908.0469 O94776 O94776 594 611 MTA2 Metastasis-associated protein MTA2 yes yes 2 4.576E-16 249.58 By MS/MS 5 0 1 1 0 0 0 11054 365 11652 27674 22163 22163 0 0 0 QKLYNERMEGQLK Q K L K 0 1 1 0 0 2 2 1 0 0 2 2 1 0 0 0 0 0 1 0 0 0 13 2 1635.8403 REV__P57679 yes yes 2 0.039074 60.398 By MS/MS 4 0 1 1 0 0 0 + 11055 2962 11653 27675 22164 22164 1222 0 0 0 QKLYTLQDK PTRVTAIHIDPATHRQKLYTLQDKAQVADV DPATHRQKLYTLQDKAQVADVVVSRWLRVT R Q K D K A 0 0 0 1 0 2 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 0 9 1 1135.6237 P49327 P49327 1064 1072 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00038613 166.09 By MS/MS 2.17 0.687 1 3 2 6 2152300 2152300 0 11056 946 11654;11655 27676;27677;27678;27679;27680;27681 22165;22166;22167;22168 22166 1 727980 0 QKPITPETAEK LRDDPSTIEKLAKNKQKPITPETAEKLARD AKNKQKPITPETAEKLARDLKAVKYVECSA K Q K E K L 1 0 0 0 0 1 2 0 0 1 0 2 0 0 2 0 2 0 0 0 0 0 11 1 1240.6663 P60953 P60953 134 144 CDC42 Cell division control protein 42 homolog yes yes 2 0.0025464 134.23 By MS/MS 9.5 0.5 1 1 2 0 0 0 11057 1100 11656 27682;27683 22169 22169 0 0 0 QKPSNTEDFIEDIVK FTASFNRPNLYYEVRQKPSNTEDFIEDIVK QKPSNTEDFIEDIVKLINGRYKGQSGIIYC R Q K V K L 0 0 1 2 0 1 2 0 0 2 0 2 0 1 1 1 1 0 0 1 0 0 15 1 1761.8785 P46063 P46063 292 306 RECQL ATP-dependent DNA helicase Q1 yes yes 2;3 0.005768 98 By MS/MS 5 0 2 2 468000 468000 0 11058 909 11657;11658 27684;27685 22170;22171 22170 1 4693.8 0 QKVDSLLENLEK GDDLQAIKKELTQIKQKVDSLLENLEKIEK QIKQKVDSLLENLEKIEKEQSKQAVEMKND K Q K E K I 0 0 1 1 0 1 2 0 0 0 3 2 0 0 0 1 0 0 0 1 0 0 12 1 1414.7668 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 205 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 1.1642E-11 226.33 By MS/MS 7 0 1 1 0 0 0 11059 514 11659 27686 22172 22172 0 0 0 QKVEEELNR ITRFQNSLKELQLQKQKVEEELNRLKRTAS ELQLQKQKVEEELNRLKRTASEDSCKRKKL K Q K N R L 0 1 1 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1143.5884 P15924 P15924 1571 1579 DSP Desmoplakin yes yes 2 0.016383 112.11 By MS/MS 1.5 0.5 1 1 2 0 0 0 11060 628 11660 27687;27688 22173 22173 0 0 0 QKVENLFNEK EFSFEAWNAKITDLKQKVENLFNEKCGEAL ITDLKQKVENLFNEKCGEALGLKQAVKVPF K Q K E K C 0 0 2 0 0 1 2 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1247.651 P78347 P78347 735 744 GTF2I General transcription factor II-I yes yes 2 2.1134E-07 198.61 By MS/MS By matching 3 0 3 2 1 620310 620310 0 11061 1221 11661;11662 27689;27690;27691 22174;22175 22175 1 11350 0 QKVEQNAAPSHTK TICTGARQLQDAAAKQKVEQNAAPSHTKFS AKQKVEQNAAPSHTKFSIYPPIPGEESSLR K Q K T K F 2 0 1 0 0 2 1 0 1 0 0 2 0 0 1 1 1 0 0 1 0 0 13 1 1436.7372 P82912 P82912 47 59 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 0.00084633 122.18 By MS/MS 9.6 0.49 2 3 5 1441600 1441600 0 11062 1234 11663;11664 27692;27693;27694;27695;27696 22176;22177;22178;22179;22180 22176 2 51610 0 QKYNVRSMPIR IRRKIMSSPLSKELRQKYNVRSMPIRKDDE KELRQKYNVRSMPIRKDDEVQVVRGHYKGQ R Q K I R K 0 2 1 0 0 1 0 0 0 1 0 1 1 0 1 1 0 0 1 1 0 0 11 2 1390.7503 P61254;Q9UNX3 P61254 40 50 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 1 NaN NaN NaN 0 0 0 11063 1119;2794 0 0 0 QLADKER HITPGTHASEHAVNKQLADKERVAAALENT ASEHAVNKQLADKERVAAALENTHLLEVVN K Q L E R V 1 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 1 858.45593 Q9Y3D0 Q9Y3D0 135 141 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 2 0.039882 143.02 By MS/MS 9.5 0.5 1 1 2 567910 567910 0 11064 2870 11665 27697;27698 22181 22181 1 28467 0 QLAEDFLR RQTLMWSATWPKEVRQLAEDFLRDYTQINV TWPKEVRQLAEDFLRDYTQINVGNLELSAN R Q L L R D 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 990.51345 Q92841 Q92841 365 372 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.0043283 128.61 By MS/MS 5 0 1 1 1625400 1625400 0 11065 2073 11666 27699 22182 22182 1 16302 0 QLAELREK PVTKAIMEKSNVTLRQLAELREKSQEWMDK KSNVTLRQLAELREKSQEWMDKSPLFMNSF R Q L E K S 1 1 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 1 985.55564 Q86UK0 Q86UK0 831 838 ABCA12 ATP-binding cassette sub-family A member 12 yes yes 3 0.0058142 110.12 By MS/MS 5 0 1 1 1410900 1410900 0 11066 1820 11667 27700 22183 22183 1 14151 0 QLALEDAK FLRDHFNKKMYEEFKQLALEDAKEGYRYGL KMYEEFKQLALEDAKEGYRYGLECLFRYYS K Q L A K E 2 0 0 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 886.476 Q6PKG0 Q6PKG0 937 944 LARP1 La-related protein 1 yes yes 2 0.033356 88.819 By MS/MS 3 0 1 1 720100 720100 0 11067 1722 11668 27701 22184 22184 1 13176 0 QLAPAPGGTHVVALVPAR ELLRSVERDLSIDPRQLAPAPGGTHVVALV PAPGGTHVVALVPARWLASLRDRRLPLGPC R Q L A R W 4 1 0 0 0 1 0 2 1 0 2 0 0 0 3 0 1 0 0 3 0 0 18 0 1752.9999 Q562E7 Q562E7 44 61 WDR81 WD repeat-containing protein 81 yes yes 2 0.00055734 151.54 By MS/MS 2 0 1 1 0 0 0 11068 1593 11669 27702 22185 22185 0 0 0 QLAVYEEFAR MPEQIRLKVGGVDPKQLAVYEEFARNVPGF GVDPKQLAVYEEFARNVPGFLPTNDLSQPT K Q L A R N 2 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1224.6139 A5YKK6 A5YKK6 1568 1577 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 1.5909E-14 226.09 By MS/MS 2 0.816 1 1 1 3 1422600 1422600 0 11069 19 11670 27703;27704;27705 22186;22187 22187 2 372330 0 QLCDNAGFDATNILNK LLIGAYAKALEIIPRQLCDNAGFDATNILN LCDNAGFDATNILNKLRARHAQGGTWYGVD R Q L N K L 2 0 3 2 1 1 0 1 0 1 2 1 0 1 0 0 1 0 0 0 0 0 16 0 1792.8414 Q99832 Q99832 448 463 CCT7 T-complex protein 1 subunit eta yes yes 2;3 4.3927E-56 350.43 By MS/MS 6.44 2.45 1 1 3 1 1 1 1 9 80152000 80152000 0 11070 2270 11671;11672 27706;27707;27708;27709;27710;27711;27712;27713;27714 22188;22189;22190;22191;22192;22193;22194;22195;22196 22196 8 598080 0 QLCDNAGFDATNILNKLR LLIGAYAKALEIIPRQLCDNAGFDATNILN DNAGFDATNILNKLRARHAQGGTWYGVDIN R Q L L R A 2 1 3 2 1 1 0 1 0 1 3 1 0 1 0 0 1 0 0 0 0 0 18 1 2062.0266 Q99832 Q99832 448 465 CCT7 T-complex protein 1 subunit eta yes yes 2 1.5206E-11 247.11 By MS/MS 6 0 1 1 0 0 0 11071 2270 11673 27715 22197 22197 0 0 0 QLCFQDQYVK AGYHVWLWAVEAFAKQLCFQDQYVKAASHL EAFAKQLCFQDQYVKAASHLLSIHKVYEAV K Q L V K A 0 0 0 1 1 3 0 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 10 0 1327.6231 Q8TEQ6 Q8TEQ6 971 980 GEMIN5 Gem-associated protein 5 yes yes 2 0.0013003 117.81 By MS/MS 3.5 0.5 1 1 2 2381200 2381200 0 11072 2002 11674 27716;27717 22198 22198 1 116510 0 QLCGGSQAAIER DCDTEMEVDSSQLRRQLCGGSQAAIERMIH LRRQLCGGSQAAIERMIHFGRELQAMSEQL R Q L E R M 2 1 0 0 1 2 1 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1288.6194 Q96S59 Q96S59 608 619 RANBP9 Ran-binding protein 9 yes yes 2 3.4786E-05 172.21 By MS/MS 4 0 1 1 1171800 1171800 0 11073 2232 11675 27718 22199 22199 1 110270 0 QLCQESFSSSALGLK ALQSLLKASSKDVVRQLCQESFSSSALGLK QLCQESFSSSALGLKKLLDVTCSSLSVTQE R Q L L K K 1 0 0 0 1 2 1 1 0 0 3 1 0 1 0 4 0 0 0 0 0 0 15 0 1653.8032 Q9P000 Q9P000 26 40 COMMD9 COMM domain-containing protein 9 yes yes 2 0.0001895 177.16 By MS/MS 9 0 1 1 248530 248530 0 11074 2658 11676 27719 22200 22200 1 4891.1 0 QLCQYQR MSMHRSHFLACPLLRQLCQYQRCVPQDTGF FLACPLLRQLCQYQRCVPQDTGFSSLFLKV R Q L Q R C 0 1 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 994.46545 Q8N201 Q8N201 1438 1444 INTS1 Integrator complex subunit 1 yes yes 2 0.029363 113.08 By MS/MS 2 0 1 1 272220 272220 0 11075 1907 11677 27720 22201 22201 1 92077 0 QLCSVWISNK QMLFRHMFYCKHVERQLCSVWISNKTAKQH KHVERQLCSVWISNKTAKQHSLHSAQWFAG R Q L N K T 0 0 1 0 1 1 0 0 0 1 1 1 0 0 0 2 0 1 0 1 0 0 10 0 1233.6176 Q9BSJ2 Q9BSJ2 654 663 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00098727 123.86 By MS/MS 4 0 1 1 1118000 1118000 0 11076 2307 11678 27721 22202 22202 1 105210 0 QLDDEEVSEFALDGLK IGHQALEDILPFLLKQLDDEEVSEFALDGL LDDEEVSEFALDGLKQVMAIKSRVVLPYLV K Q L L K Q 1 0 0 3 0 1 3 1 0 0 3 1 0 1 0 1 0 0 0 1 0 0 16 0 1806.8523 Q92616 Q92616 2051 2066 GCN1L1 Translational activator GCN1 yes yes 2 7.8771E-11 283.05 By MS/MS 3 1 1 1 2 404120 404120 0 11077 2064 11679 27722;27723 22203;22204 22203 2 90087 0 QLDDKDEEINQQSQLVEK AERRKCEEEIAKLYKQLDDKDEEINQQSQL DKDEEINQQSQLVEKLKTQMLDQEELLAST K Q L E K L 0 0 1 3 0 4 3 0 0 1 2 2 0 0 0 1 0 0 0 1 0 0 18 1 2158.039 P33176 P33176 431 448 KIF5B Kinesin-1 heavy chain yes yes 3 0.00026677 124.04 By MS/MS 4 0 1 1 4247100 4247100 0 11078 800 11680 27724 22205 22205 1 399680 0 QLDDLKVELSQLR KARDLRGKKKEELLKQLDDLKVELSQLRVA LKQLDDLKVELSQLRVAKVTGGAASKLSKI K Q L L R V 0 1 0 2 0 2 1 0 0 0 4 1 0 0 0 1 0 0 0 1 0 0 13 1 1555.857 P42766 P42766 20 32 RPL35 60S ribosomal protein L35 yes yes 2;3 0.008098 120.55 By MS/MS 9.33 0.471 2 1 3 513430 513430 0 11079 888 11681;11682 27725;27726;27727 22206;22207 22207 1 10104 0 QLDECASAITK HKLKAQQDKLDKINKQLDECASAITKAQVA KINKQLDECASAITKAQVAIKTADRNLQKA K Q L T K A 2 0 0 1 1 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1234.5864 Q9NTJ3 Q9NTJ3 912 922 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 2.2351E-05 161.67 By MS/MS 2.67 0.471 1 2 3 1702600 1702600 0 11080 2575 11683;11684 27728;27729;27730 22208;22209;22210 22209 2 59581 0 QLDEPKLER EVEERLQKEQEKLQRQLDEPKLERRPRERH QEKLQRQLDEPKLERRPRERHPSWRSEETQ R Q L E R R 0 1 0 1 0 1 2 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 9 1 1126.5982 P23588 P23588 390 398 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0030069 143.37 By MS/MS By matching 5.5 0.764 4 1 1 4 2 9019300 8675700 343610 11081 708 11685;11686 27731;27732;27733;27734;27735;27736 22211;22212 22211 1 85634 288560 QLDPDLVEAQR LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQ RDGRQLDPDLVEAQRKKLQEMVSSIQASMD R Q L Q R K 1 1 0 2 0 2 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1282.6517 Q96JH7 Q96JH7 1096 1106 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0018287 112.3 By MS/MS 3 0 1 1 302330 302330 0 11082 2179 11687 27737 22213 22213 1 5531.7 0 QLDSIVGER NLEPLFEQYINNLRRQLDSIVGERGRLDSE INNLRRQLDSIVGERGRLDSELRNMQDLVE R Q L E R G 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 CON__P13647;P13647;CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P13647 229 237 KRT5;KRT6A;KRT6C Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 0.00062128 142.98 By MS/MS By MS/MS 5 2.74 2 2 4 3 1 2 3 1 1 2 11 10 33555000 22447000 11108000 + 11083 52;44;56;40 11688;11689 27738;27739;27740;27741;27742;27743;27744;27745;27746;27747;27748;27749;27750;27751;27752;27753;27754;27755;27756;27757;27758 22214;22215;22216;22217;22218;22219;22220;22221;22222;22223;22224;22225;22226;22227;22228;22229;22230;22231 22225 17 2263700 8211400 QLEEAEEEAQR DQADKASTRLKQLKRQLEEAEEEAQRANAS QLKRQLEEAEEEAQRANASRRKLQRELEDA R Q L Q R A 2 1 0 0 0 2 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1330.6001 P35579 P35579 1878 1888 MYH9 Myosin-9 yes yes 2 4.9631E-34 294.15 By MS/MS 2 0 1 1 1589400 1589400 0 11084 824 11690 27759 22232 22232 1 537600 0 QLEEAEEEATR EQMEKANARMKQLKRQLEEAEEEATRANAS QLKRQLEEAEEEATRANASRRKLQRELDDA R Q L T R A 2 1 0 0 0 1 5 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 11 0 1303.5892 P35580 P35580 1885 1895 MYH10 Myosin-10 yes yes 2 2.3072E-34 305.74 By MS/MS 2 0 1 1 969350 969350 0 11085 825 11691 27760 22233 22233 1 327870 0 QLEEQNAR EEKGSDGAASSYQLKQLEEQNARLKDALVR ASSYQLKQLEEQNARLKDALVRMRDLSSSE K Q L A R L 1 1 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 986.47812 Q14203 Q14203 362 369 DCTN1 Dynactin subunit 1 yes yes 2 0.0071659 115.46 By MS/MS 3 0 1 1 285410 285410 0 11086 1432 11692 27761 22234 22234 1 5222.1 0 QLELENLTTQETR LTLISEDIKSYYTVRQLELENLTTQETREI VRQLELENLTTQETREILHFHYTTWPDFGV R Q L T R E 0 1 1 0 0 2 3 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 13 0 1573.7948 P18031 P18031 157 169 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.7733E-56 356.13 By MS/MS 6.33 2.21 1 1 2 2 2 1 9 35106000 35106000 0 11087 649 11693;11694 27762;27763;27764;27765;27766;27767;27768;27769;27770 22235;22236;22237;22238;22239 22237 3 326130 0 QLENCSLELLK Q L L K 0 0 1 0 1 1 2 0 0 0 4 1 0 0 0 1 0 0 0 0 0 0 11 0 1345.6912 REV__Q5M775 yes yes 2 0.012243 89.698 By MS/MS By matching 9 0 3 2 1 520030 479370 40669 + 11088 2967 11695 27771;27772;27773 22240 22240 1 9434 92738 QLEQLQGER GLEPVFEACLDQLRKQLEQLQGERGALDAE LDQLRKQLEQLQGERGALDAELKACRDQEE K Q L E R G 0 1 0 0 0 3 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1099.5622 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 172 180 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.0045385 125.71 By MS/MS 3 0 1 1 205990 0 205990 + 11089 70 11696 27774 22241 22241 1 0 26220 QLEQTLQQFNIK LFHNAVSAYFAGNQKQLEQTLQQFNIKLRP NQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ K Q L I K L 0 0 1 0 0 4 1 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1488.7936 P53365 P53365 315 326 ARFIP2 Arfaptin-2 yes yes 2 6.5608E-10 256.24 By MS/MS 7.5 0.5 1 1 2 962150 962150 0 11090 1029 11697 27775;27776 22242 22242 1 13986 0 QLEQVIAK LAREVDLKDYEDQQKQLEQVIAKDLLPSRD DYEDQQKQLEQVIAKDLLPSRDRQHLPLIK K Q L A K D 1 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 927.53893 P02671 P02671 203 210 FGA Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 2 0.0066413 118.74 By MS/MS 3 0 1 1 297670 297670 0 11091 457 11698 27777 22243 22243 1 5446.5 0 QLETVAAR IAHYYATRSAAQSVKQLETVAARLSVSLLR SAAQSVKQLETVAARLSVSLLRHTQLLPVD K Q L A R L 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 886.48723 Q9UG01 Q9UG01 1552 1559 IFT172 Intraflagellar transport protein 172 homolog yes yes 2 0.009037 111.82 By MS/MS 8.5 1.12 1 1 1 1 4 11153000 11153000 0 11092 2717 11699 27778;27779;27780;27781 22244 22244 1 186780 0 QLEVVHTLDGK ERNCIEIVNKLIAQKQLEVVHTLDGKEYIT IAQKQLEVVHTLDGKEYITPAQISKEMRDE K Q L G K E 0 0 0 1 0 1 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1237.6667 O94874 O94874 44 54 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0010267 141.1 By MS/MS 4 0 1 1 0 0 0 11093 372 11700 27782 22245 22245 0 0 0 QLEVYTSGGDPESVAGEYGR LNVLHSLVDKSNINRQLEVYTSGGDPESVA TSGGDPESVAGEYGRHSLYKMLGYFSLVGL R Q L G R H 1 1 0 1 0 1 3 4 0 0 1 0 0 0 1 2 1 0 2 2 0 0 20 0 2112.96 Q9Y262 Q9Y262 243 262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 8.2615E-47 329.21 By MS/MS 4.64 1.87 1 1 1 1 3 2 2 11 116700000 116700000 0 11094 2814 11701;11702 27783;27784;27785;27786;27787;27788;27789;27790;27791;27792;27793 22246;22247;22248;22249;22250;22251 22249 4 1442700 0 QLFEEQAK ICNAYTELNDPMRQRQLFEEQAKAKAAGDD NDPMRQRQLFEEQAKAKAAGDDEAMFIDEN R Q L A K A 1 0 0 0 0 2 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 991.49746 Q15046 Q15046 510 517 KARS Lysine--tRNA ligase yes yes 2 0.025808 93.195 By MS/MS By matching 5 0 2 1 1 2805700 2772300 33327 11095 1481 11703 27794;27795 22252 22252 1 27805 27987 QLFHPEQLITGK LEPTVIDEVRTGTYRQLFHPEQLITGKEDA TYRQLFHPEQLITGKEDAANNYARGHYTIG R Q L G K E 0 0 0 0 0 2 1 1 1 1 2 1 0 1 1 0 1 0 0 0 0 0 12 0 1409.7667 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 85 96 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2;3 0.00030639 152.69 By MS/MS 7.5 1.5 1 2 2 2 2 1 10 83613000 83613000 0 11096 1210;1751;2290;1211 11704 27796;27797;27798;27799;27800;27801;27802;27803;27804;27805 22253;22254;22255;22256;22257 22253 5 668780 0 QLFHPEQLITGKEDAANNYAR LEPTVIDEVRTGTYRQLFHPEQLITGKEDA QLITGKEDAANNYARGHYTIGKEIIDLVLD R Q L A R G 3 1 2 1 0 2 2 1 1 1 2 1 0 1 1 0 1 0 1 0 0 0 21 1 2414.1979 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3 Q9BQE3 85 105 TUBA1B;TUBA4A;TUBA1A;TUBA8;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2;3;4 1.1715E-08 241.39 By MS/MS By matching 7.29 1.32 7 3 3 3 1 16 1 321090000 321090000 0 11097 1210;1751;2290;1211 11705;11706 27806;27807;27808;27809;27810;27811;27812;27813;27814;27815;27816;27817;27818;27819;27820;27821;27822 22258;22259;22260;22261;22262;22263;22264;22265;22266;22267;22268;22269 22263 4 2233200 0 QLFKDNPFK ARPFRRLEASRDQLRQLFKDNPFKLHLIEE SRDQLRQLFKDNPFKLHLIEEKVTGPTATV R Q L F K L 0 0 1 1 0 1 0 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 9 1 1135.6026 Q9BW92 Q9BW92 207 215 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.010561 119.21 By MS/MS 5 0.816 1 1 1 3 0 0 0 11098 2346 11707 27823;27824;27825 22270 22270 0 0 0 QLFLEPSQALGPPEPPEAR GNLMSAMLHVEALERQLFLEPSQALGPPEP EPSQALGPPEPPEARVPGKAQPEVDTKAEP R Q L A R V 2 1 0 0 0 2 3 1 0 0 3 0 0 1 5 1 0 0 0 0 0 0 19 0 2075.0688 O75127 O75127 387 405 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2;3 4.6141E-08 238.67 By MS/MS 5 0 3 3 2548900 2548900 0 11099 293 11708;11709 27826;27827;27828 22271;22272;22273 22271 2 25564 0 QLFLETADLYATK TLIQQEVDALEELSRQLFLETADLYATKER SRQLFLETADLYATKERIEYSKTFKGKYFN R Q L T K E 2 0 0 1 0 1 1 0 0 0 3 1 0 1 0 0 2 0 1 0 0 0 13 0 1511.7872 P0CG08;B7ZAQ6 P0CG08 260 272 GPR89B;GPR89A Golgi pH regulator B;Golgi pH regulator A yes no 2 0.00013408 169.89 By MS/MS 1 0 1 1 89597 89597 0 11100 31 11710 27829 22274;22275;22276 22275 3 21590 0 QLFLGGVDR FPTQALNFAFKDKYKQLFLGGVDRHKQFWR FKDKYKQLFLGGVDRHKQFWRYFAGNLASG K Q L D R H 0 1 0 1 0 1 0 2 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1003.5451 P12235 P12235 97 105 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0016451 125.82 By MS/MS 5.5 3.59 1 1 1 1 1 1 6 8143800 8143800 0 11101 588 11711 27830;27831;27832;27833;27834;27835 22277;22278;22279 22279 3 283320 0 QLFLQTYAR LLHDQVGVIQFGPYKQLFLQTYARGRTTYQ QFGPYKQLFLQTYARGRTTYQALPCLPSMY K Q L A R G 1 1 0 0 0 2 0 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 9 0 1138.6135 P53621 P53621 957 965 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0045089 116.05 By MS/MS 4.5 1.98 1 1 2 2 2 2 1 1 12 3100100 3100100 0 11102 1034 11712;11713 27836;27837;27838;27839;27840;27841;27842;27843;27844;27845;27846;27847 22280;22281;22282 22282 2 153880 0 QLGEANEEFALR PFTVYQVRWLRPVHRQLGEANEEFALRVQQ VHRQLGEANEEFALRVQQLVAKELGQTGTR R Q L L R V 2 1 1 0 0 1 3 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1375.6732 Q9Y679 Q9Y679 232 243 AUP1 Ancient ubiquitous protein 1 yes yes 2 9.5025E-09 215.72 By MS/MS By matching 7 0 3 2 1 28553000 28506000 46935 11103 2934 11714;11715 27848;27849;27850 22283;22284 22283 1 447500 84529 QLGELLTDGVR KYLEYERRHGSGEWRQLGELLTDGVRSFRE GEWRQLGELLTDGVRSFREPAPAEALPQQY R Q L V R S 0 1 0 1 0 1 1 2 0 0 3 0 0 0 0 0 1 0 0 1 0 0 11 0 1199.651 Q8IU81 Q8IU81 329 339 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.00017764 157.78 By MS/MS 5 0 2 2 1089300 1089300 0 11104 1857 11716;11717 27851;27852 22285;22286 22285 1 10925 0 QLHDDYFYHDEL NPDLFLTSEATDYGRQLHDDYFYHDEL___ YGRQLHDDYFYHDEL_______________ R Q L E L - 0 0 0 3 0 1 1 0 2 0 2 0 0 1 0 0 0 0 2 0 0 0 12 0 1593.6736 Q14257 Q14257 306 317 RCN2 Reticulocalbin-2 yes yes 2;3 0.00012562 159.79 By MS/MS 7.3 1.1 3 3 2 2 10 57241000 57241000 0 11105 1436 11718;11719 27853;27854;27855;27856;27857;27858;27859;27860;27861;27862 22287;22288;22289;22290;22291;22292;22293;22294 22287 6 444480 0 QLILLAQQMK ENLRDAVQLNVIATRQLILLAQQMKNLEVF VIATRQLILLAQQMKNLEVFMHVSTAYAYC R Q L M K N 1 0 0 0 0 3 0 0 0 1 3 1 1 0 0 0 0 0 0 0 0 0 10 0 1184.6951 Q8WVX9 Q8WVX9 134 143 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 2.189E-05 166.68 By MS/MS 6 0 1 1 1622300 1622300 0 11106 2031 11720 27863 22295 22295 1 11152 0 QLILVLCSEENMQK ETLKAENQPIRDVLKQLILVLCSEENMQKA KQLILVLCSEENMQKALELKAKYESDMVTG K Q L Q K A 0 0 1 0 1 2 2 0 0 1 3 1 1 0 0 1 0 0 0 1 0 0 14 0 1703.8586 P42704 P42704 684 697 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 8.3477E-33 299.29 By MS/MS 3.33 0.471 2 1 3 375700 375700 0 11107 886 11721;11722 27864;27865;27866 22296;22297;22298 22296 473 2 6874.2 0 QLIMQSEMR QKEFMLMNARLQLERQLIMQSEMRERQMAM RLQLERQLIMQSEMRERQMAMQIAWSREFL R Q L M R E 0 1 0 0 0 2 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 0 9 0 1134.5525 Q9HBL7 Q9HBL7 31 39 PLGRKT Plasminogen receptor (KT) yes yes 2 0.027793 66.429 By MS/MS 3 1.41 1 1 1 1 1 5 0 0 0 11108 2506 11723 27867;27868;27869;27870;27871 22299 22299 1105 0 0 0 QLINTLCSGR LAYGKGVLSGEECKKQLINTLCSGRWDQQY EECKKQLINTLCSGRWDQQYVIQLTSMFKD K Q L G R W 0 1 1 0 1 1 0 1 0 1 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1160.5972 Q9NVI1 Q9NVI1 159 168 FANCI Fanconi anemia group I protein yes yes 2 0.0075759 99.788 By MS/MS 3 0 1 1 800970 800970 0 11109 2597 11724 27872 22300 22300 1 14656 0 QLIVGVNK QTREHALLAYTLGVKQLIVGVNKMDSTEPP AYTLGVKQLIVGVNKMDSTEPPYSQKRYEE K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 Q5VTE0;P68104;Q05639 Q5VTE0 147 154 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.00241 147.69 By MS/MS 7 0 1 1 0 0 0 11110 1209 11725 27873 22301 22301 0 0 0 QLKLDPSIFESLQK ISHVIIGLKTAKGTKQLKLDPSIFESLQKE KQLKLDPSIFESLQKERVEAGDVIYIEANS K Q L Q K E 0 0 0 1 0 2 1 0 0 1 3 2 0 1 1 2 0 0 0 0 0 0 14 1 1644.9087 Q9Y265 Q9Y265 169 182 RUVBL1 RuvB-like 1 yes yes 2;3 1.8536E-06 206.74 By MS/MS 6 0 3 3 3498300 3498300 0 11111 2815 11726;11727 27874;27875;27876 22302;22303;22304;22305 22305 2 24048 0 QLKLDPSIFESLQKER ISHVIIGLKTAKGTKQLKLDPSIFESLQKE LKLDPSIFESLQKERVEAGDVIYIEANSGA K Q L E R V 0 1 0 1 0 2 2 0 0 1 3 2 0 1 1 2 0 0 0 0 0 0 16 2 1930.0524 Q9Y265 Q9Y265 169 184 RUVBL1 RuvB-like 1 yes yes 3 4.4911E-05 191.51 By MS/MS 6 0 1 1 0 0 0 11112 2815 11728 27877 22306 22306 0 0 0 QLLAGGIAGAVSR DEFTEDEKKSGQWWRQLLAGGIAGAVSRTS WRQLLAGGIAGAVSRTSTAPLDRLKIMMQV R Q L S R T 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1211.6986 Q6NUK1 Q6NUK1 197 209 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 1.6298E-07 205.12 By MS/MS 7.33 0.471 2 1 3 10275000 10275000 0 11113 1687 11729;11730 27878;27879;27880 22307;22308 22307 1 161310 0 QLLALESR EQLSGYKRMRRQHQKQLLALESRLRGEREE MRRQHQKQLLALESRLRGEREEHSARLQRE K Q L S R L 1 1 0 0 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 928.53418 Q9UL54 Q9UL54 505 512 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.012568 107.9 By MS/MS 3 0 1 1 500540 500540 0 11114 2770 11731 27881 22309 22309 1 9158.4 0 QLLANDPFFR ECDYRREAACAQNFRQLLANDPFFRVPAVV AQNFRQLLANDPFFRVPAVVKELCTTRVLG R Q L F R V 1 1 1 1 0 1 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 10 0 1219.635 Q96D53 Q96D53 299 308 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.0024769 117.31 By MS/MS 6 0 1 1 0 0 0 11115 2132 11732 27882 22310 22310 0 0 0 QLLANDPFFRVPAVVK ECDYRREAACAQNFRQLLANDPFFRVPAVV LLANDPFFRVPAVVKELCTTRVLGMELAGG R Q L V K E 2 1 1 1 0 1 0 0 0 0 2 1 0 2 2 0 0 0 0 3 0 0 16 1 1813.025 Q96D53 Q96D53 299 314 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.032039 96.866 By MS/MS 6 0 1 1 0 0 0 11116 2132 11733 27883 22311;22312 22312 0 0 0 QLLCTNEDVSSPASADQR PTNVFISVESIENSRQLLCTNEDVSSPASA CTNEDVSSPASADQRIQEAWKRSLATVHPD R Q L Q R I 2 1 1 2 1 2 1 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 18 0 1989.9062 Q6P4A7 Q6P4A7 67 84 SFXN4 Sideroflexin-4 yes yes 2 1.6762E-25 292.16 By MS/MS 7.33 0.471 2 1 3 7299900 7299900 0 11117 1710 11734;11735 27884;27885;27886 22313;22314 22313 1 111010 0 QLLDDEEQLTAK RRVRDEKERSLRAARQLLDDEEQLTAKTLY AARQLLDDEEQLTAKTLYMSHRELPAWVSF R Q L A K T 1 0 0 2 0 2 2 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 12 0 1401.6987 Q9BSJ8 Q9BSJ8 107 118 ESYT1 Extended synaptotagmin-1 yes yes 2 7.4125E-07 201.09 By MS/MS 3 1.29 1 1 2 1 1 6 8945300 8945300 0 11118 2308 11736;11737 27887;27888;27889;27890;27891;27892 22315;22316;22317;22318;22319 22315 4 433180 0 QLLDLPLDTDLENEK EVFTKIRLVLEVLQKQLLDLPLDTDLENEK QLLDLPLDTDLENEKTSTVPLAEMLGDMIW K Q L E K T 0 0 1 3 0 1 2 0 0 0 5 1 0 0 1 0 1 0 0 0 0 0 15 0 1754.8938 O43264 O43264 306 320 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.859E-17 267.37 By MS/MS 4.5 0.5 1 1 2 2005500 2005500 0 11119 200 11738 27893;27894 22320;22321 22320 2 167900 0 QLLHLAEEK VVIRGPSSDVEKAKKQLLHLAEEKQTKSFT VEKAKKQLLHLAEEKQTKSFTVDIRAKPEY K Q L E K Q 1 0 0 0 0 1 2 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1079.5975 Q00341 Q00341 715 723 HDLBP Vigilin yes yes 2 0.0058724 107.69 By MS/MS 3 0 1 1 682090 682090 0 11120 1260 11739 27895 22322 22322 1 12480 0 QLLLESQSQLDAAK SAECQNYAKEVAGLRQLLLESQSQLDAAKS RQLLLESQSQLDAAKSEAQKQSDELALVRQ R Q L A K S 2 0 0 1 0 3 1 0 0 0 4 1 0 0 0 2 0 0 0 0 0 0 14 0 1542.8253 Q9P2E9 Q9P2E9 1228 1241 RRBP1 Ribosome-binding protein 1 yes yes 2 0.00046314 150.51 By MS/MS 2 0 1 1 151100 151100 0 11121 2682 11740 27896 22323 22323 1 51109 0 QLLLSFKPVMQK DSSSAPSKEQLEQEKQLLLSFKPVMQKFLH QEKQLLLSFKPVMQKFLHDHVDLQVSALYA K Q L Q K F 0 0 0 0 0 2 0 0 0 0 3 2 1 1 1 1 0 0 0 1 0 0 12 1 1430.8319 P78344 P78344 807 818 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0014125 110.54 By MS/MS 4.5 0.5 1 1 2 0 0 0 11122 1219 11741 27897;27898 22324 22324 707 0 0 0 QLLLTADDR SIGTENTEENRRFYRQLLLTADDRVNPCIG NRRFYRQLLLTADDRVNPCIGGVILFHETL R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 P04075 P04075 61 69 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.01245 96.143 By MS/MS 7 0 1 1 1282900 1282900 0 11123 467 11742 27899 22325 22325 1 20140 0 QLLLTPNAVVIVEDAK PVVKYDRKGYKPRSRQLLLTPNAVVIVEDA LLLTPNAVVIVEDAKVKQRIDYANLTGISV R Q L A K V 2 0 1 1 0 1 1 0 0 1 3 1 0 0 1 0 1 0 0 3 0 0 16 0 1721.9927 O00159 O00159 939 954 MYO1C Unconventional myosin-Ic yes yes 2 5.9269E-17 264.28 By MS/MS 4 0 2 2 1140800 1140800 0 11124 85 11743;11744 27900;27901 22326;22327 22326 1 107360 0 QLLLTPNAVVIVEDAKVK PVVKYDRKGYKPRSRQLLLTPNAVVIVEDA LTPNAVVIVEDAKVKQRIDYANLTGISVSS R Q L V K Q 2 0 1 1 0 1 1 0 0 1 3 2 0 0 1 0 1 0 0 4 0 0 18 1 1949.1561 O00159 O00159 939 956 MYO1C Unconventional myosin-Ic yes yes 2 0.0027319 118.51 By MS/MS 4 0 1 1 0 0 0 11125 85 11745 27902 22328 22328 0 0 0 QLLMVGGLDR PGKFYSLPQSPQQFKQLLMVGGLDRYFQVA PQQFKQLLMVGGLDRYFQVARCYRDEGSRP K Q L D R Y 0 1 0 1 0 1 0 2 0 0 3 0 1 0 0 0 0 0 0 1 0 0 10 0 1100.6012 Q6PI48 Q6PI48 248 257 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.0083855 97.965 By MS/MS 5 0 1 1 525360 525360 0 11126 1717 11746 27903 22329 22329 1 5269.1 0 QLLNAITHPEIR RKVLGDLIFNQPDRRQLLNAITHPEIRKEM DRRQLLNAITHPEIRKEMMKETFKYFLRGY R Q L I R K 1 1 1 0 0 1 1 0 1 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1403.7885 Q8WVC6 Q8WVC6 81 92 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.0031605 113.22 By MS/MS 9 0 1 1 0 0 0 11127 2024 11747 27904 22330 22330 0 0 0 QLLQANPILESFGNAK HKGRKDHNIPGELERQLLQANPILESFGNA LLQANPILESFGNAKTVKNDNSSRFGKFIR R Q L A K T 2 0 2 0 0 2 1 1 0 1 3 1 0 1 1 1 0 0 0 0 0 0 16 0 1741.9363 P35580 P35580 217 232 MYH10 Myosin-10 yes yes 2 0.00042757 166.7 By MS/MS 2 0 1 1 93124 93124 0 11128 825 11748 27905 22331 22331 1 31498 0 QLLQEQESVK EELRRLSSEVEALRRQLLQEQESVKQAHLR EALRRQLLQEQESVKQAHLRNEHFQKAIED R Q L V K Q 0 0 0 0 0 3 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1200.635 P15924 P15924 1667 1676 DSP Desmoplakin yes yes 2 8.18E-06 172.59 By MS/MS By MS/MS 2.5 1.12 1 1 1 1 3 1 1937900 1375500 562420 11129 628 11749 27906;27907;27908;27909 22332;22333;22334;22335 22332 4 256390 71587 QLLQQLVTSYPSTK LQHMHHDAILASSARQLLQQLVTSYPSTKM RQLLQQLVTSYPSTKMVIVSLHTFTLLAAS R Q L T K M 0 0 0 0 0 3 0 0 0 0 3 1 0 0 1 2 2 0 1 1 0 0 14 0 1604.8774 Q9NVH2 Q9NVH2 216 229 INTS7 Integrator complex subunit 7 yes yes 2 0.0019536 124.38 By MS/MS By matching 4.5 2.94 2 1 1 2 1 1 1 1 9 1 10409000 9113700 1295500 11130 2596 11750;11751 27910;27911;27912;27913;27914;27915;27916;27917;27918;27919 22336;22337;22338;22339;22340 22339 3 757520 1295500 QLLSASYEFQR SVFQVKLGNQNVETKQLLSASYEFQREFTQ VETKQLLSASYEFQREFTQGVKPDWTIARI K Q L Q R E 1 1 0 0 0 2 1 0 0 0 2 0 0 1 0 2 0 0 1 0 0 0 11 0 1340.6725 Q8WWC4 Q8WWC4 259 269 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00079306 125.71 By MS/MS 9.5 0.5 1 1 2 1499200 1499200 0 11131 2034 11752 27920;27921 22341 22341 1 31847 0 QLLTLSSELSQAR EKRITEAEKNERVQRQLLTLSSELSQARDE QRQLLTLSSELSQARDENKRTHNDIIHNEN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 P15311 P15311 530 542 EZR Ezrin yes yes 2 8.9791E-06 197.07 By MS/MS 5 0 2 2 761900 761900 0 11132 624 11753;11754 27922;27923 22342;22343;22344 22342 1 7641.5 0 QLMFSQFAQGR TLDIQRQQRMELLDRQLMFSQFAQGRRQRQ LLDRQLMFSQFAQGRRQRQQQGGMINWNRL R Q L G R R 1 1 0 0 0 3 0 1 0 0 1 0 1 2 0 1 0 0 0 0 0 0 11 0 1311.6394 Q8NBM4 Q8NBM4 253 263 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 0.030747 79.489 By MS/MS 1.5 0.5 1 1 2 628620 628620 0 11133 1940 11755 27924;27925 22345 22345 963 1 200340 0 QLMTLENKLK EQMSGYKRMRRQHQKQLMTLENKLKAEMDE RQHQKQLMTLENKLKAEMDEHRLRLDKDLE K Q L L K A 0 0 1 0 0 1 1 0 0 0 3 2 1 0 0 0 1 0 0 0 0 0 10 1 1216.6849 Q7L7X3 Q7L7X3 477 486 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 3 0.042291 52.579 By MS/MS 9 0 1 1 0 0 0 11134 1768 11756 27926 22346 22346 934 0 0 0 QLNDTTTQNK Q L N K 0 0 2 1 0 2 0 0 0 0 1 1 0 0 0 0 3 0 0 0 0 0 10 0 1161.5626 REV__Q9H9A5 yes yes 2 0.005029 105.52 By MS/MS 3.67 0.471 1 2 3 2552500 2552500 0 + 11135 2986 11757 27927;27928;27929 22347 22347 1 232420 0 QLNYTIGEVPISFVDR SKGYVFQMEMIVRARQLNYTIGEVPISFVD LNYTIGEVPISFVDRVYGESKLGGNEIVSF R Q L D R V 0 1 1 1 0 1 1 1 0 2 1 0 0 1 1 1 1 0 1 2 0 0 16 0 1849.9574 O60762 O60762 219 234 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 2.9334E-07 217.46 By MS/MS 8 0 1 1 770690 770690 0 11136 275 11758 27930 22348;22349 22348 2 9729.9 0 QLPLEPESPSGQVGPR PPDTPPAMKNATSSKQLPLEPESPSGQVGP LPLEPESPSGQVGPRPAPPQEESPSSEAKS K Q L P R P 0 1 0 0 0 2 2 2 0 0 2 0 0 0 4 2 0 0 0 1 0 0 16 0 1689.8686 Q3KQU3 Q3KQU3 63 78 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.0078711 92.781 By MS/MS 3 0 1 1 212040 212040 0 11137 1575 11759 27931 22350 22350 1 3879.7 0 QLPTLILFQGGK DVSTRYKVSTSPLTKQLPTLILFQGGKEAM LTKQLPTLILFQGGKEAMRRPQIDKKGRAV K Q L G K E 0 0 0 0 0 2 0 2 0 1 3 1 0 1 1 0 1 0 0 0 0 0 12 0 1313.7707 Q9Y320 Q9Y320 216 227 TMX2 Thioredoxin-related transmembrane protein 2 yes yes 2 0.026543 87.298 By MS/MS 8 0 2 2 166060 166060 0 11138 2856 11760;11761 27932;27933 22351;22352 22351 1 2096.5 0 QLQAETEPIVK HALREKRTTVVAQLKQLQAETEPIVKMFED AQLKQLQAETEPIVKMFEDPETTRQMQSTR K Q L V K M 1 0 0 0 0 2 2 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 0 1254.682 P60228 P60228 83 93 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 4.9725E-13 241.13 By MS/MS By matching 6.5 2.18 1 1 4 2 2 1 1 10 2 114310000 113870000 437610 11139 1090 11762;11763 27934;27935;27936;27937;27938;27939;27940;27941;27942;27943;27944;27945 22353;22354;22355;22356;22357;22358;22359 22358 6 1098300 448430 QLQAIEFNK KLTNAEGVEFKLSKKQLQAIEFNKALLAMY FKLSKKQLQAIEFNKALLAMYTNQAEQCRK K Q L N K A 1 0 1 0 0 2 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1089.5819 O76094 O76094 302 310 SRP72 Signal recognition particle subunit SRP72 yes yes 2 7.3126E-05 167.23 By MS/MS 5 0 1 1 5447300 5447300 0 11140 362 11764 27946 22360 22360 1 54634 0 QLQAQIDNQNDPEVGQQS EPLISAFREFEELAKQLQAQIDNQNDPEVG AQIDNQNDPEVGQQS_______________ K Q L Q S - 1 0 2 2 0 6 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 18 0 2010.9243 Q96D09 Q96D09 821 838 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 5.3235E-05 191.19 By MS/MS 4 0 1 1 1260600 1260600 0 11141 2131 11765 27947 22361 22361 1 118630 0 QLQDIATLADQR WYQALTHGLNEEQRKQLQDIATLADQRRAA QRKQLQDIATLADQRRAAHESKMIEKHGGY K Q L Q R R 2 1 0 2 0 3 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1370.7154 O95373 O95373 991 1002 IPO7 Importin-7 yes yes 2 5.3877E-13 289.22 By MS/MS 3 0 1 1 329400 329400 0 11142 406 11766 27948 22362 22362 1 6027.2 0 QLQEETPPGGPLTEALPPAR QWKKLRRESWEREVKQLQEETPPGGPLTEA TPPGGPLTEALPPARKEGDLPPLWWYIVTR K Q L A R K 2 1 0 0 0 2 3 2 0 0 3 0 0 0 5 0 2 0 0 0 0 0 20 0 2100.0851 Q9Y6M9 Q9Y6M9 139 158 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2 7.0422E-06 181.75 By MS/MS 9 0 1 1 265320 265320 0 11143 2948 11767 27949 22363 22363 1 5221.5 0 QLQELQQQQEEEERQR PEYILDPEPQPTREKQLQELQQQQEEEERQ LQELQQQQEEEERQRQQRREERRQQNLRAR K Q L Q R Q 0 2 0 0 0 7 5 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 16 1 2098.0039 Q8NC60 Q8NC60 90 105 NOA1 Nitric oxide-associated protein 1 yes yes 3 0.025231 68.809 By MS/MS 5 0 1 1 2154100 2154100 0 11144 1949 11768 27950 22364 22364 1 21605 0 QLQFYTEAAR GGVGIRREYAAQLERQLQFYTEAARRLGND AQLERQLQFYTEAARRLGNDGSRDAAKEAL R Q L A R R 2 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 10 0 1225.6091 Q6P1N0 Q6P1N0 912 921 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.005029 105.52 By MS/MS 3 0 1 1 305140 305140 0 11145 1701 11769 27951 22365 22365 1 5583.1 0 QLQIDIDCLTK IPSLEEMQQLRSCNRQLQIDIDCLTKEIDL SCNRQLQIDIDCLTKEIDLFQARGPHFNPS R Q L T K E 0 0 0 2 1 2 0 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1345.6912 Q9NYJ8 Q9NYJ8 601 611 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 1.2234E-06 187.99 By MS/MS 5 0 1 1 778380 778380 0 11146 2634 11770 27952 22366 22366 1 7806.7 0 QLQKMVHDIKNNEGGIMNK DKLNKITVPASQKLRQLQKMVHDIKNNEGG MVHDIKNNEGGIMNKIKKLKVKAPPSVPRR R Q L N K I 0 0 3 1 0 2 1 2 1 2 1 3 2 0 0 0 0 0 0 1 0 0 19 2 2196.1143 Q8WV28 Q8WV28 17 35 BLNK B-cell linker protein yes yes 3 0.031632 64.537 By MS/MS 6 0 1 1 0 0 0 11147 2021 11771 27953 22367 22367 979;980 0 0 0 QLQNIIQATSR ENLLKASFERMDHLRQLQNIIQATSREIMW DHLRQLQNIIQATSREIMWINDCEEEELLY R Q L S R E 1 1 1 0 0 3 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 11 0 1270.6993 P15924 P15924 271 281 DSP Desmoplakin yes yes 2 3.4098E-07 206.49 By MS/MS By MS/MS 3.88 2.74 3 3 4 2 1 2 1 9 7 5234900 2454300 2780600 11148 628 11772;11773 27954;27955;27956;27957;27958;27959;27960;27961;27962;27963;27964;27965;27966;27967;27968;27969 22368;22369;22370;22371;22372;22373;22374;22375;22376;22377;22378;22379;22380;22381;22382 22376 11 533730 1021100 QLQNISLAAASGGAK MTVIQWVSDFSERIKQLQNISLAAASGGAK QLQNISLAAASGGAKELKNIHVCLGGLFVP K Q L A K E 4 0 1 0 0 2 0 2 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1427.7732 Q14204 Q14204 4488 4502 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 4.9455E-11 236.08 By MS/MS 2.29 1.03 2 2 2 1 7 2736800 2736800 0 11149 1433 11774;11775 27970;27971;27972;27973;27974;27975;27976 22383;22384;22385;22386;22387;22388 22384 3 722450 0 QLQQAQAAGAEQEVEK GELAKRSERRAEAEKQLQQAQAAGAEQEVE LQQAQAAGAEQEVEKFTKRLVKVTKQHNDE K Q L E K F 4 0 0 0 0 5 3 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 16 0 1726.8486 P39748 P39748 110 125 FEN1 Flap endonuclease 1 yes yes 2 8.1088E-44 324.41 By MS/MS 6.5 0.5 1 1 2 2214000 2214000 0 11150 856 11776 27977;27978 22389 22389 1 32109 0 QLQSEQPQTAAAR AVQKLMVHNWEYLGKQLQSEQPQTAAARS_ GKQLQSEQPQTAAARS______________ K Q L A R S 3 1 0 0 0 4 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 13 0 1426.7165 Q9UI12 Q9UI12 470 482 ATP6V1H V-type proton ATPase subunit H yes yes 2 3.3489E-06 201.09 By MS/MS 6 0 1 1 2118900 2118900 0 11151 2735 11777 27979 22390 22390 1 14566 0 QLQTCFINAAK ELLPSAAENFLVLGRQLQTCFINAAKAEEK VLGRQLQTCFINAAKAEEKDELLHFFQIVT R Q L A K A 2 0 1 0 1 2 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 0 1292.6547 Q15051 Q15051 121 131 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 7.9632E-07 193.38 By MS/MS 5 0 1 1 1086700 1086700 0 11152 1482 11778 27980 22391 22391 1 10899 0 QLQVLILSR NHISSLPDNVFSNLRQLQVLILSRNQISFI VFSNLRQLQVLILSRNQISFISPGAFNGLT R Q L S R N 0 1 0 0 0 2 0 0 0 1 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1068.6655 Q8TF66 Q8TF66 318 326 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 0.0030573 131.11 By MS/MS 10 0 1 1 225920 0 225920 11153 2008 11779 27981 22392 22392 1 0 289230 QLSDAISIIGR NIVHLMLSSPEQIQKQLSDAISIIGREDFP QIQKQLSDAISIIGREDFPQKWPDLLTEMV K Q L G R E 1 1 0 1 0 1 0 1 0 3 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1171.6561 P55060 P55060 110 120 CSE1L Exportin-2 yes yes 2 0.00040017 141.88 By MS/MS 4 0 1 1 0 0 0 11154 1053 11780 27982 22393 22393 0 0 0 QLSFISPPTPQPK QMMEAATRQIEERKKQLSFISPPTPQPKTP KKQLSFISPPTPQPKTPSSSQPERLPIGNT K Q L P K T 0 0 0 0 0 2 0 0 0 1 1 1 0 1 4 2 1 0 0 0 0 0 13 0 1438.782 O43395 O43395 159 171 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 1.926E-08 158.56 By MS/MS 4 0 1 1 616200 616200 0 11155 206 11781 27983 22394 22394 0 57989 0 QLSHPANFGPR GKNEETLREEEEEKKQLSHPANFGPRKYCL EEKKQLSHPANFGPRKYCLRECICEVEGQV K Q L P R K 1 1 1 0 0 1 0 1 1 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1222.6207 P82663 P82663 122 132 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2 0.0067672 107.55 By MS/MS 9 0 3 3 1259500 1259500 0 11156 1230 11782;11783 27984;27985;27986 22395;22396;22397 22397 1 24788 0 QLSNLALLCQNQGK IREKVLGKFHPDVAKQLSNLALLCQNQGKA KQLSNLALLCQNQGKAEEVEYYYRRALEIY K Q L G K A 1 0 2 0 1 3 0 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 14 0 1585.8246 Q9H0B6 Q9H0B6 326 339 KLC2 Kinesin light chain 2 yes yes 2 0.00079061 140.24 By MS/MS 5 0 2 2 708950 708950 0 11157 2405 11784;11785 27987;27988 22398;22399 22398 0 7110.4 0 QLSNPQQEVQNIFK QPTEMASQDFFQRWKQLSNPQQEVQNIFKA KQLSNPQQEVQNIFKAKHPMDTEVTKAKII K Q L F K A 0 0 2 0 0 4 1 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 14 0 1671.858 O94973 O94973 843 856 AP2A2 AP-2 complex subunit alpha-2 yes yes 2 0.012382 105.13 By MS/MS 4 0 1 1 226310 226310 0 11158 381 11786 27989 22400 22400 0 21298 0 QLSQLGQK LYGCSELFNATQFIKQLSQLGQK_______ NATQFIKQLSQLGQK_______________ K Q L Q K - 0 0 0 0 0 3 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 900.50288 Q8WVM8 Q8WVM8 635 642 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.015404 104.75 By MS/MS 5 0 1 1 2818100 2818100 0 11159 2028 11787 27990 22401 22401 1 28264 0 QLSSCLPNIVPK GSVELLGAMAYCAPKQLSSCLPNIVPKLTE APKQLSSCLPNIVPKLTEVLTDSHVKVQKA K Q L P K L 0 0 1 0 1 1 0 0 0 1 2 1 0 0 2 2 0 0 0 1 0 0 12 0 1354.7279 Q92616 Q92616 1531 1542 GCN1L1 Translational activator GCN1 yes yes 2 0.0023587 120.27 By MS/MS 2 0 1 1 0 0 0 11160 2064 11788 27991 22402 22402 0 0 0 QLSSEELEQFQK KRLKGAFKAVMTSIKQLSSEELEQFQKTGT SIKQLSSEELEQFQKTGTIVVEGHELHDED K Q L Q K T 0 0 0 0 0 3 3 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 12 0 1464.7096 P41252 P41252 918 929 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 4.412E-07 202.03 By MS/MS By MS/MS 3.57 1.5 1 3 1 1 1 6 1 17179000 16996000 182480 11161 871 11789;11790 27992;27993;27994;27995;27996;27997;27998 22403;22404;22405;22406;22407;22408 22405 5 507240 23227 QLSVSDR RQMSLCGTPEKSSYRQLSVSDRSSIRVEEI TPEKSSYRQLSVSDRSSIRVEEIIPAARVA R Q L D R S 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 7 0 803.41373 Q9UPU5 Q9UPU5 1297 1303 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.031909 103.28 By MS/MS 9 0 1 1 1952900 1952900 0 11162 2802 11791 27999 22409 22409 1 38433 0 QLTAHLQDVNR QETVADYQQTIKKYRQLTAHLQDVNRELTN KKYRQLTAHLQDVNRELTNQQEASVERQQQ R Q L N R E 1 1 1 1 0 2 0 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1293.6789 Q14203 Q14203 522 532 DCTN1 Dynactin subunit 1 yes yes 2;3 0.00014725 143.5 By MS/MS 3.25 0.433 3 1 4 1024200 1024200 0 11163 1432 11792;11793 28000;28001;28002;28003 22410;22411;22412 22412 2 30029 0 QLTEEKFIVK KALQSVGQIVGEVLKQLTEEKFIVKATNGP GEVLKQLTEEKFIVKATNGPRYVVGCRRQL K Q L V K A 0 0 0 0 0 1 2 0 0 1 1 2 0 1 0 0 1 0 0 1 0 0 10 1 1233.6969 P62333 P62333 63 72 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.00063878 151.83 By MS/MS 7 0 1 1 0 0 0 11164 1159 11794 28004 22413;22414 22414 0 0 0 QLTFEEIAK LCLMEMTFTRPANHRQLTFEEIAKSAKITV RPANHRQLTFEEIAKSAKITVNEVELLVMK R Q L A K S 1 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1077.5706 Q9UNM6 Q9UNM6 290 298 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0029404 121.73 By MS/MS By matching 7.25 0.433 3 1 3 1 12975000 12939000 35859 11165 2791 11795;11796 28005;28006;28007;28008 22415;22416 22415 1 201630 64580 QLTGGVDVER QSQEEQRREMLETVKQLTGGVDVERNSTEA LETVKQLTGGVDVERNSTEAERNKTRESAK K Q L E R N 0 1 0 1 0 1 1 2 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1072.5513 O43432 O43432 1179 1188 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.016522 88.496 By MS/MS 2 0 1 1 895740 895740 0 11166 210 11797 28009 22417 22417 1 302970 0 QLTLSCPLCVNPVCR DLVHSHIQSNELCSKQLTLSCPLCVNPVCR QLTLSCPLCVNPVCRETKSFFTSQQL____ K Q L C R E 0 1 1 0 3 1 0 0 0 0 3 0 0 0 2 1 1 0 0 2 0 0 15 0 1815.8794 P22830 P22830 398 412 FECH Ferrochelatase, mitochondrial yes yes 2 0.0022228 119.74 By MS/MS 7 0 1 1 0 0 0 11167 698 11798 28010 22418 22418 0 0 0 QLTPPEGSSK ILHTYYKFDYKAHQRQLTPPEGSSKSEQDQ KAHQRQLTPPEGSSKSEQDQAENEGEDSAV R Q L S K S 0 0 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 0 0 0 10 0 1042.5295 Q99613;B5ME19 Q99613 522 531 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0074741 100.02 By MS/MS 4.5 0.5 1 1 2 21453000 21453000 0 11168 2252 11799 28011;28012 22419 22419 1 1683400 0 QLTPPEGSSKSEQDQAENEGEDSAVLMER ILHTYYKFDYKAHQRQLTPPEGSSKSEQDQ QAENEGEDSAVLMERLCKYIYAKDRTDRIR R Q L E R L 2 1 1 2 0 3 6 2 0 0 2 1 1 0 2 4 1 0 0 1 0 0 29 1 3160.4102 Q99613;B5ME19 Q99613 522 550 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 4.5947E-05 88.278 By MS/MS 4.5 0.5 2 2 4 12673000 12673000 0 11169 2252 11800;11801 28013;28014;28015;28016 22420;22421;22422 22421 1045 3 982210 0 QLTVLSDQQK SNIIGFCYDYLHILKQLTVLSDQQKANVEA LHILKQLTVLSDQQKANVEAIMLAVMKKLT K Q L Q K A 0 0 0 1 0 3 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 O43592 O43592 360 369 XPOT Exportin-T yes yes 2 0.046202 74.165 By MS/MS 4 0 1 1 1754300 1754300 0 11170 220 11802 28017 22423 22423 1 165090 0 QLVAEQVTYQR SFRRDNNELLLFILKQLVAEQVTYQRNRFG FILKQLVAEQVTYQRNRFGAQQDTIEVPEK K Q L Q R N 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 11 0 1333.699 P49736 P49736 838 848 MCM2 DNA replication licensing factor MCM2 yes yes 2 3.4301E-11 201.61 By MS/MS 3 0 2 2 0 0 0 11171 958 11803;11804 28018;28019 22424;22425;22426 22426 1 0 0 QLVDTTVELANK HFWQHRMALDRRNYRQLVDTTVELANKVGA NYRQLVDTTVELANKVGAAEIISRIVDDLK R Q L N K V 1 0 1 1 0 1 1 0 0 0 2 1 0 0 0 0 2 0 0 2 0 0 12 0 1329.714 O75533 O75533 832 843 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00053931 144.7 By MS/MS 3 0 2 2 1437000 1437000 0 11172 332 11805;11806 28020;28021 22427;22428 22428 1 26294 0 QLVEETQEQVR LRELQAKQQRILHWRQLVEETQEQVRLLIK LHWRQLVEETQEQVRLLIKGNSASKTRLCR R Q L V R L 0 1 0 0 0 3 3 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1357.6838 O94927 O94927 391 401 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 4.7839E-34 294.93 By MS/MS 5 0 1 1 1706000 1706000 0 11173 377 11807 28022 22429 22429 1 17110 0 QLVEQVEQIQK IAAKDKLSELQLRVRQLVEQVEQIQKEQNY LRVRQLVEQVEQIQKEQNYQRWREERFRQT R Q L Q K E 0 0 0 0 0 4 2 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1340.73 Q9BVK6 Q9BVK6 170 180 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 4.1625E-13 232.72 By MS/MS 9 0 1 1 3386400 3386400 0 11174 2334 11808 28023 22430 22430 1 66645 0 QLVEQVEQIQKEQNYQR IAAKDKLSELQLRVRQLVEQVEQIQKEQNY VEQVEQIQKEQNYQRWREERFRQTSESTNQ R Q L Q R W 0 1 1 0 0 6 3 0 0 1 1 1 0 0 0 0 0 0 1 2 0 0 17 1 2159.0971 Q9BVK6 Q9BVK6 170 186 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2;3 5.8846E-07 222.81 By MS/MS 8.67 0.471 1 2 3 1981500 1981500 0 11175 2334 11809;11810 28024;28025;28026 22431;22432 22432 1 37314 0 QLVQDENVR PTVLLGALPLRSLTRQLVQDENVRGVITMN LRSLTRQLVQDENVRGVITMNEEYETRFLC R Q L V R G 0 1 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 1099.5622 Q8WUK0 Q8WUK0 58 66 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 9.0797E-07 181.55 By MS/MS By matching 8.2 1.17 1 1 3 2 3 3753800 3730900 22887 11176 2016 11811;11812 28027;28028;28029;28030;28031 22433;22434 22433 1 73424 52190 QLVSDEDKAQLASK WWDEHLSEENVPFIKQLVSDEDKAQLASKL KQLVSDEDKAQLASKLCPLKDEPWPIHPWE K Q L S K L 2 0 0 2 0 2 1 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 14 1 1530.789 P09001 P09001 63 76 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2;3 1.1851E-06 213.63 By MS/MS 7.5 0.5 3 3 6 9147300 9147300 0 11177 531 11813;11814 28032;28033;28034;28035;28036;28037 22435;22436;22437;22438;22439;22440 22439 4 125920 0 QLVSEEDNTSAPSLFK RSTAGDPTVPGSLFRQLVSEEDNTSAPSLF LVSEEDNTSAPSLFKLGWLSSMTK______ R Q L F K L 1 0 1 1 0 1 2 0 0 0 2 1 0 1 1 3 1 0 0 1 0 0 16 0 1763.8578 Q8WTW3 Q8WTW3 956 971 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 6.0064E-24 277.82 By MS/MS 4 0 2 2 1600800 1600800 0 11178 2010 11815;11816 28038;28039 22441;22442;22443 22442 2 150640 0 QLVTNACLIK DVAIKEPLVDVVDPKQLVTNACLIKEVDIY VVDPKQLVTNACLIKEVDIYTVKVEDLTFT K Q L I K E 1 0 1 0 1 1 0 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1158.6431 Q99873 Q99873 244 253 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.0092438 96.034 By MS/MS By matching 5 2.83 1 2 2 1 1697600 1658000 39647 11179 2271 11817 28040;28041;28042 22444;22445 22445 2 55401 71403 QLWDSPETAPAAR AGAMPNEAGGHPDARQLWDSPETAPAARTP ARQLWDSPETAPAARTPQSPAPCVLLRAQR R Q L A R T 3 1 0 1 0 1 1 0 0 0 1 0 0 0 2 1 1 1 0 0 0 0 13 0 1440.6997 Q9Y613 Q9Y613 482 494 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.014053 95.618 By MS/MS 3 0 1 1 170080 170080 0 11180 2930 11818 28043 22446 22446 1 3111.9 0 QLYETTDTTTR ADHVQSLAQLENLCKQLYETTDTTTRLQAE NLCKQLYETTDTTTRLQAEKALVEFTNSPD K Q L T R L 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 5 0 1 0 0 0 11 0 1327.6256 Q9UIA9 Q9UIA9 17 27 XPO7 Exportin-7 yes yes 2 0.00048678 131.82 By MS/MS 4 0 1 1 371680 371680 0 11181 2740 11819 28044 22447 22447 1 34978 0 QMAGCLEDCTR ALTRRLQVEPRLLSKQMAGCLEDCTRQAPE LLSKQMAGCLEDCTRQAPESPWEEQLARLL K Q M T R Q 1 1 0 1 2 1 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 11 0 1339.5319 O00411 O00411 170 180 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 7.3806E-06 175.65 By MS/MS 3 0 1 1 291520 291520 0 11182 104 11820 28045 22448 22448 1 5333.9 0 QMAQIKEK Q M E K 1 0 0 0 0 2 1 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 8 1 974.5219 REV__P02549 yes yes 3 0.054827 60.682 By MS/MS 5 0 1 1 0 0 0 + 11183 2955 11821 28046 22449 22449 1219 0 0 0 QMEPFPLR EALCRECPPRQRALRQMEPFPLRVFVNPSL PRQRALRQMEPFPLRVFVNPSLRVLDSRLV R Q M L R V 0 1 0 0 0 1 1 0 0 0 1 0 1 1 2 0 0 0 0 0 0 0 8 0 1016.5113 Q9HBH1 Q9HBH1 144 151 PDF Peptide deformylase, mitochondrial yes yes 2 0.029286 90.37 By MS/MS 9 0 1 1 196480 196480 0 11184 2504 11822 28047 22450 22450 1 3866.8 0 QMFGNADMNTFPTFK SEYQQELERELFKLKQMFGNADMNTFPTFK QMFGNADMNTFPTFKFEDPKFEVIEKPQA_ K Q M F K F 1 0 2 1 0 1 0 1 0 0 0 1 2 3 1 0 2 0 0 0 0 0 15 0 1747.7698 P18859 P18859 80 94 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2 0.0035287 96.82 By MS/MS 10 0 1 1 324890 324890 0 11185 657 11823 28048 22451 22451 330;331 1 17510 0 QMFLTQTDTGDDR KDVDFMYVELIQRCKQMFLTQTDTGDDRVY CKQMFLTQTDTGDDRVYQMPSFLQSVASVL K Q M D R V 0 1 0 3 0 2 0 1 0 0 1 0 1 1 0 0 3 0 0 0 0 0 13 0 1526.6671 P78527 P78527 394 406 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.8632E-17 280.38 By MS/MS 1.5 0.5 1 1 2 852500 852500 0 11186 1225 11824 28049;28050 22452;22453 22453 2 268920 0 QMLFNLQAVQER TLSGGKHHGPVEALKQMLFNLQAVQERFNQ ALKQMLFNLQAVQERFNQNKTTDPKEEIKQ K Q M E R F 1 1 1 0 0 3 1 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 12 0 1475.7555 Q8IYD9 Q8IYD9 299 310 LAS2 Lung adenoma susceptibility protein 2 yes yes 3 0.023182 63.694 By MS/MS By matching 4.44 2.95 2 1 1 1 1 1 1 1 8 1 0 0 0 11187 1886 11825 28051;28052;28053;28054;28055;28056;28057;28058;28059 22454;22455;22456;22457;22458 22456 958 0 0 0 QMQVLHPAAR KGDVTITNDGATILKQMQVLHPAARMLVEL ATILKQMQVLHPAARMLVELSKAQDIEAGD K Q M A R M 2 1 0 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 10 0 1149.6077 P50991 P50991 80 89 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0057112 96.668 By MS/MS 6.6 1.2 4 1 5 1326000 1326000 0 11188 985 11826;11827;11828;11829 28060;28061;28062;28063;28064 22459;22460;22461;22462;22463 22463 543 3 10488 0 QMRSSLSADLR SRAVQAAESVRSTTRQMRSSLSADLRQAHS STTRQMRSSLSADLRQAHSLRGSCLF____ R Q M L R Q 1 2 0 1 0 1 0 0 0 0 2 0 1 0 0 3 0 0 0 0 0 0 11 1 1262.6401 Q7Z591 Q7Z591 1418 1428 AKNA AT-hook-containing transcription factor yes yes 2 0.046868 61.691 By MS/MS 7 0 1 1 0 0 0 11189 1796 11830 28065 22464 22464 939 0 0 0 QMSGAQIK GCIIGRQGAKINEIRQMSGAQIKIANPVEG AKINEIRQMSGAQIKIANPVEGSTDRQVTI R Q M I K I 1 0 0 0 0 2 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 8 0 861.43784 P57721;Q15365;Q15366 Q15366 315 322 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2 0.048086 83.206 By MS/MS 7.5 0.5 1 1 2 3443900 3443900 0 11190 1501;1500;1080 11831 28066;28067 22465 22465 1 53459 0 QMSLLLR LIIYDDLSKQAVAYRQMSLLLRRPPGREAY SKQAVAYRQMSLLLRRPPGREAYPGDVFYL R Q M L R R 0 1 0 0 0 1 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 7 0 859.49496 P25705 P25705 323 329 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.022174 110.61 By MS/MS 6.5 0.5 1 1 2 24724000 24724000 0 11191 723 11832 28068;28069 22466 22466 1 174600 0 QMTDPNVALTFLEK VNPLSLVEIILHVVRQMTDPNVALTFLEKT RQMTDPNVALTFLEKTREKVKSSDEAVILC R Q M E K T 1 0 1 1 0 1 1 0 0 0 2 1 1 1 1 0 2 0 0 1 0 0 14 0 1605.8072 Q9UNM6 Q9UNM6 86 99 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 1.099E-11 244.73 By MS/MS 7 0 3 3 1638100 1638100 0 11192 2791 11833;11834;11835 28070;28071;28072 22467;22468;22469 22468 1169 2 25715 0 QMTDVLLTPATDALK ELDDKSISDMWTMVKQMTDVLLTPATDALK QMTDVLLTPATDALKNRSSVEVRMEFVRQA K Q M L K N 2 0 0 2 0 1 0 0 0 0 3 1 1 0 1 0 3 0 0 1 0 0 15 0 1615.8491 Q8N1F7 Q8N1F7 229 243 NUP93 Nuclear pore complex protein Nup93 yes yes 2 4.9333E-07 208.82 By MS/MS 4 0 1 1 274520 274520 0 11193 1903 11836 28073 22470 22470 1 25834 0 QMVIDVLHPGK IRTRKFMTNRLLQRKQMVIDVLHPGKATVP LQRKQMVIDVLHPGKATVPKTEIREKLAKM K Q M G K A 0 0 0 1 0 1 0 1 1 1 1 1 1 0 1 0 0 0 0 2 0 0 11 0 1235.6696 P62847 P62847 22 32 RPS24 40S ribosomal protein S24 yes yes 2;3 8.4061E-10 222.28 By MS/MS 9.5 0.5 5 5 10 9921700 9921700 0 11194 1175 11837;11838;11839;11840 28074;28075;28076;28077;28078;28079;28080;28081;28082;28083 22471;22472;22473;22474;22475;22476;22477;22478;22479 22475 678 5 234590 0 QNAPLTSIQIR SSLSEKIADSIGNNRQNAPLTSIQIRFIQN GNNRQNAPLTSIQIRFIQNMIQETLDDFRE R Q N I R F 1 1 1 0 0 2 0 0 0 2 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1239.6935 Q8NHV4 Q8NHV4 580 590 NEDD1 Protein NEDD1 yes yes 2 0.0072226 98.044 By MS/MS 5 0 1 1 938980 938980 0 11195 1969 11841 28084 22480 22480 1 9417.5 0 QNASFLYETVLPVVEK SLRCEQDPEKKAFIRQNASFLYETVLPVVE NASFLYETVLPVVEKRFEEGVGKPAKQLQD R Q N E K R 1 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 1 0 1 3 0 0 16 0 1835.9669 Q8IYI6 Q8IYI6 676 691 EXOC8 Exocyst complex component 8 yes yes 2 0.00057522 129.17 By MS/MS 5 0 1 1 94798 94798 0 11196 1887 11842 28085 22481;22482 22481 2 950.78 0 QNFEIGHNFAR TIRTHASASLYLLMRQNFEIGHNFARVKMQ LLMRQNFEIGHNFARVKMQVTMSLSSLVGT R Q N A R V 1 1 2 0 0 1 1 1 1 1 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1331.6371 Q96HP0 Q96HP0 1491 1501 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.046804 83 By MS/MS 2 0 1 1 0 0 0 11197 2166 11843 28086 22483 22483 0 0 0 QNFEIGNNFAR TIRSHASASLYLLMRQNFEIGNNFARVKMQ LLMRQNFEIGNNFARVKMQVTMSLSSLVGT R Q N A R V 1 1 3 0 0 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1308.6211 Q96N67 Q96N67 1582 1592 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.00043674 140.16 By MS/MS 2.8 0.748 2 2 1 5 3938600 3938600 0 11198 2201 11844;11845 28087;28088;28089;28090;28091 22484;22485;22486;22487 22487 3 1000900 0 QNGIQTNKPALR RTQEFLSACKSLQTRQNGIQTNKPALRAVR QTRQNGIQTNKPALRAVRQRSEFTLMAKRI R Q N L R A 1 1 2 0 0 2 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 12 1 1338.7368 Q13190 Q13190 75 86 STX5 Syntaxin-5 yes yes 2 0.0013027 146.11 By MS/MS 7 0 1 1 0 0 0 11199 1364 11846 28092 22488 22488 0 0 0 QNGYLEFDALSR IYSRTQSTWVDSFFRQNGYLEFDALSRLGI FFRQNGYLEFDALSRLGIPDAVSYIKKRYK R Q N S R L 1 1 1 1 0 1 1 1 0 0 2 0 0 1 0 1 0 0 1 0 0 0 12 0 1411.6732 O94874 O94874 263 274 UFL1 E3 UFM1-protein ligase 1 yes yes 2 6.9973E-05 161.19 By MS/MS 4.33 0.471 2 1 3 1832500 1832500 0 11200 372 11847;11848 28093;28094;28095 22489;22490 22489 1 172450 0 QNKLEQVEK IEGRYATALYSAASKQNKLEQVEKELLRVA YSAASKQNKLEQVEKELLRVAQILKEPKVA K Q N E K E 0 0 1 0 0 2 2 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1114.5982 P48047 P48047 52 60 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 8.6304E-05 177.7 By MS/MS 8.75 0.661 3 4 1 8 10494000 10494000 0 11201 932 11849;11850 28096;28097;28098;28099;28100;28101;28102;28103 22491;22492;22493;22494;22495 22492 2 197620 0 QNKLEQVEKELLR IEGRYATALYSAASKQNKLEQVEKELLRVA SKQNKLEQVEKELLRVAQILKEPKVAASVL K Q N L R V 0 1 1 0 0 2 3 0 0 0 3 2 0 0 0 0 0 0 0 1 0 0 13 2 1625.9101 P48047 P48047 52 64 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 0.00027567 139.19 By MS/MS 8.5 0.5 1 1 2 0 0 0 11202 932 11851 28104;28105 22496;22497 22497 0 0 0 QNKTPLDK ISLVEAGAHTDMTNKQNKTPLDKSTTGVSE HTDMTNKQNKTPLDKSTTGVSEILLKTQMK K Q N D K S 0 0 1 1 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 8 1 942.51345 Q9UK73 Q9UK73 572 579 FEM1B Protein fem-1 homolog B yes yes 2 0.01133 140.09 By MS/MS 9 0 1 1 0 0 0 11203 2757 11852 28106 22498 22498 0 0 0 QNLAEAITLAER QSEFAARLNKVEMERQNLAEAITLAERKYS MERQNLAEAITLAERKYSDEKKRVDELQQQ R Q N E R K 3 1 1 0 0 1 2 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1327.7096 Q8TBA6 Q8TBA6 387 398 GOLGA5 Golgin subfamily A member 5 yes yes 2 0.0012649 131.17 By MS/MS 4 0 1 1 0 0 0 11204 1982 11853 28107 22499 22499 0 0 0 QNLDALLNQLK MKEQPWVSVQPRKLRQNLDALLNQLKSFPA RKLRQNLDALLNQLKSFPARLRQYASYEFV R Q N L K S 1 0 2 1 0 2 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 11 0 1268.7089 Q14204 Q14204 1361 1371 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.2003E-05 171.33 By MS/MS 1.5 0.5 1 1 2 208120 208120 0 11205 1433 11854 28108;28109 22500;22501;22502;22503 22503 4 63240 0 QNLESNLTNLIK DHQVAALSERYDKLKQNLESNLTNLIKRNT KLKQNLESNLTNLIKRNTELETLLAKLIQT K Q N I K R 0 0 3 0 0 1 1 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 12 0 1385.7514 O15344 O15344 221 232 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 2 0.0039975 112.75 By MS/MS 5 0 1 1 300170 300170 0 11206 183 11855 28110 22504 22504 1 3010.5 0 QNLFLGSLTSR QEEQQRLAELSKSNKQNLFLGSLTSRLWPR KSNKQNLFLGSLTSRLWPRSKQP_______ K Q N S R L 0 1 1 0 0 1 0 1 0 0 3 0 0 1 0 2 1 0 0 0 0 0 11 0 1234.667 Q3ZCQ8 Q3ZCQ8 335 345 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 1.7358E-06 181.53 By MS/MS 8 1.1 2 2 1 5 8254000 8254000 0 11207 1580 11856;11857 28111;28112;28113;28114;28115 22505;22506;22507;22508;22509 22505 3 145870 0 QNLLDDLVTR AVSTHQITQLEGDRRQNLLDDLVTRERLLL EGDRRQNLLDDLVTRERLLLASFKNEGAEP R Q N T R E 0 1 1 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1185.6354 Q9UNK0 Q9UNK0 80 89 STX8 Syntaxin-8 yes yes 2 1.4779E-05 171.33 By MS/MS 8.33 0.471 2 1 3 1138100 1138100 0 11208 2789 11858;11859 28116;28117;28118 22510;22511;22512;22513;22514 22510 2 16431 0 QNLLSVGDYR LKMKPGRPRIKKDEKQNLLSVGDYRHRRTE KKDEKQNLLSVGDYRHRRTEQEEDEELLTE K Q N Y R H 0 1 1 1 0 1 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1163.5935 O60264 O60264 133 142 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.048625 61.213 By MS/MS 3 0 1 1 0 0 0 11209 251 11860 28119 22515 22515 0 0 0 QNLQEEKER EEEVQQQKLAEERRRQNLQEEKERKLECLP AEERRRQNLQEEKERKLECLPPEPSPDDPE R Q N E R K 0 1 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1172.5786 Q96CS3 Q96CS3 337 345 FAF2 FAS-associated factor 2 yes yes 2 4.6645E-08 179.37 By MS/MS 7 0 1 1 0 0 0 11210 2126 11861 28120 22516 22516 1 0 0 QNQEYQVLLDVR NVESQLAEIRSDLERQNQEYQVLLDVRARL LERQNQEYQVLLDVRARLECEINTYRSLLE R Q N V R A 0 1 1 1 0 3 1 0 0 0 2 0 0 0 0 0 0 0 1 2 0 0 12 0 1503.7682 CON__O76011;CON__Q8IUT8;O76011;CON__Q14525;Q14525;CON__Q497I4;CON__Q92764;Q92764;CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009;Q14532;CON__Q14532 CON__Q14525 335 346 KRT34;KRT33B;KRT35;KRT31;KRT33A;KRT32 Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha2 no no 2 8.6093E-20 236.22 By MS/MS 10 0 1 1 198990 0 198990 + 11211 59;36;61 11862 28121 22517 22517 1 0 254760 QNQHEELQNVR LEGGKQFLEKRLQVKQNQHEELQNVRKHIH LQVKQNQHEELQNVRKHIHNCFSNLGCFLL K Q N V R K 0 1 2 0 0 3 2 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1393.6698 Q8NHH9 Q8NHH9 271 281 ATL2 Atlastin-2 yes yes 2 0.00086803 125.68 By MS/MS 6 0 1 1 0 0 0 11212 1968 11863 28122 22518 22518 0 0 0 QNTFLVLR LGQEVTLCGWIQYRRQNTFLVLRDFDGLVQ GWIQYRRQNTFLVLRDFDGLVQVIIPQDES R Q N L R D 0 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 8 0 989.56581 Q6PI48 Q6PI48 77 84 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.005383 122.13 By MS/MS 5 0 1 1 2101300 2101300 0 11213 1717 11864 28123 22519 22519 1 21075 0 QNVAVNELCGR QLTQQLMQDMEHPQRQNVAVNELCGRCHQP HPQRQNVAVNELCGRCHQPLARAQPAVRAL R Q N G R C 1 1 2 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1258.6088 Q15942 Q15942 376 386 ZYX Zyxin yes yes 2 0.0009992 121.6 By MS/MS 5 0 1 1 2836500 2836500 0 11214 1541 11865 28124 22520 22520 1 28448 0 QNVNYQGGR GMINWNRLFPPLRQRQNVNYQGGRQSEPAA PPLRQRQNVNYQGGRQSEPAAPPLEVSEEQ R Q N G R Q 0 1 2 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 9 0 1034.4894 Q8NBM4 Q8NBM4 286 294 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 1.291E-05 178.6 By MS/MS 1.5 0.5 1 1 2 550890 550890 0 11215 1940 11866 28125;28126 22521 22521 1 151970 0 QNYHQDSEAAINR ______________________________ VRQNYHQDSEAAINRQINLELYASYVYLSM R Q N N R Q 2 1 2 1 0 2 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 13 0 1544.6968 P02794 P02794 11 23 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 2 1.9932E-07 212.28 By MS/MS 9 0 1 1 0 0 0 11216 461 11867 28127 22522 22522 0 0 0 QPAEHLQLLEEAAK DLASFDEDLADYLYKQPAEHLQLLEEAAKE KQPAEHLQLLEEAAKEVADEVTRPRPSGEE K Q P A K E 3 0 0 0 0 2 3 0 1 0 3 1 0 0 1 0 0 0 0 0 0 0 14 0 1575.8257 P33992 P33992 91 104 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0046029 111.12 By MS/MS 4 0 1 1 0 0 0 11217 807 11868 28128 22523 22523 0 0 0 QPALDVLYDVMK NALKRANEFLEVGKKQPALDVLYDVMKSKK GKKQPALDVLYDVMKSKKHRTWQKIHEPIM K Q P M K S 1 0 0 2 0 1 0 0 0 0 2 1 1 0 1 0 0 0 1 2 0 0 12 0 1390.7166 Q14152 Q14152 25 36 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0030091 93.839 By MS/MS 3 0.632 1 3 1 5 1084600 1084600 0 11218 1422 11869;11870;11871 28129;28130;28131;28132;28133 22524;22525;22526;22527 22525 818 2 68026 0 QPAPTTIGGLNK TSTSKAKTQPTSLPKQPAPTTIGGLNKKPM LPKQPAPTTIGGLNKKPMSLASGLVPAAPP K Q P N K K 1 0 1 0 0 1 0 2 0 1 1 1 0 0 2 0 2 0 0 0 0 0 12 0 1195.6561 P27816 P27816 727 738 MAP4 Microtubule-associated protein 4 yes yes 2 0.045778 64.04 By MS/MS 2 0 1 1 237050 237050 0 11219 746 11872 28134 22528 22528 1 80179 0 QPASQLQK PLKISSVSEVMKESKQPASQLQKQKGDTPA EVMKESKQPASQLQKQKGDTPASATAPTEA K Q P Q K Q 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 898.48723 Q16891 Q16891 123 130 IMMT MICOS complex subunit MIC60 yes yes 2 0.039514 86.472 By MS/MS By matching 4 0 2 1 1 437800 424640 13153 11220 1563 11873 28135;28136 22529 22529 1 39962 28025 QPDSGISSIR GAVLKGPFSRYDYQRQPDSGISSIRSFKTI YDYQRQPDSGISSIRSFKTILPAAAQDVYY R Q P I R S 0 1 0 1 0 1 0 1 0 2 0 0 0 0 1 3 0 0 0 0 0 0 10 0 1058.5356 P04843 P04843 269 278 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.047487 84.198 By MS/MS 5 0 1 1 0 0 0 11221 478 11874 28137 22530 22530 0 0 0 QPETVLTETPQDTIELNR NSCTTQVPNHSLSHRQPETVLTETPQDTIE TVLTETPQDTIELNRLNLESSNSKYSLNTD R Q P N R L 0 1 1 1 0 2 3 0 0 1 2 0 0 0 2 0 4 0 0 1 0 0 18 0 2083.0433 P30260 P30260 197 214 CDC27 Cell division cycle protein 27 homolog yes yes 2 1.5408E-12 247.73 By MS/MS 4 0 1 1 1131100 1131100 0 11222 771 11875 28138 22531 22531 1 106440 0 QPGNETADTVLK IPEAVFVEDVDSFMKQPGNETADTVLKKLD FMKQPGNETADTVLKKLDEQYQKYKFMELN K Q P L K K 1 0 1 1 0 1 1 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 12 0 1271.6357 P61758 P61758 40 51 VBP1 Prefoldin subunit 3 yes yes 2 0.023803 95.775 By MS/MS 9 0 1 1 292430 292430 0 11223 1129 11876 28139 22532 22532 1 5755.1 0 QPGRFDEVLIR KEPAYVRCIKPNDAKQPGRFDEVLIRHQVK NDAKQPGRFDEVLIRHQVKYLGLLENLRVR K Q P I R H 0 2 0 1 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 11 1 1328.7201 O00159 O00159 633 643 MYO1C Unconventional myosin-Ic yes yes 2 0.011206 111.06 By MS/MS 4 0 1 1 0 0 0 11224 85 11877 28140 22533 22533 0 0 0 QPLLLSEDEEDTKR GEELVTKPVGGNYGKQPLLLSEDEEDTKRV KQPLLLSEDEEDTKRVVRSAKDKRFEELTN K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 Q99613;B5ME19 Q99613 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 6.5875E-16 242.97 By MS/MS 4.06 1.9 2 2 3 4 3 2 1 1 18 17152000 17152000 0 11225 2252 11878;11879 28141;28142;28143;28144;28145;28146;28147;28148;28149;28150;28151;28152;28153;28154;28155;28156;28157;28158 22534;22535;22536;22537;22538;22539;22540;22541 22535 4 1422800 0 QPMDAKEFEPK NYYPQNITMKWLKDKQPMDAKEFEPKDVLP LKDKQPMDAKEFEPKDVLPNGDGTYQGWIT K Q P P K D 1 0 0 1 0 1 2 0 0 0 0 2 1 1 2 0 0 0 0 0 0 0 11 1 1318.6227 Q30201 Q30201 244 254 HFE Hereditary hemochromatosis protein yes yes 2 0.035804 65.157 By MS/MS 9 0 1 1 0 0 0 11226 1572 11880 28159 22542 22542 879 0 0 0 QPPTAAGRPVDASPR DDQVFLMKLQSLLAKQPPTAAGRPVDASPR QPPTAAGRPVDASPRVPGGSPRTPNRSVSS K Q P P R V 3 2 0 1 0 1 0 1 0 0 0 0 0 0 4 1 1 0 0 1 0 0 15 1 1518.7903 Q9Y6G9 Q9Y6G9 386 400 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.0027064 145.09 By MS/MS 6 0 1 1 0 0 0 11227 2943 11881 28160 22543 22543 0 0 0 QPQGHLLLIGVSGAGK NEVLDHVLRIDRIFRQPQGHLLLIGVSGAG PQGHLLLIGVSGAGKTTLSRFVAWMNGLSV R Q P G K T 1 0 0 0 0 2 0 4 1 1 3 1 0 0 1 1 0 0 0 1 0 0 16 0 1573.894 Q14204 Q14204 2928 2943 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00053212 170 By MS/MS 1.5 0.5 1 1 2 0 0 0 11228 1433 11882 28161;28162 22544;22545 22544 0 0 0 QPQPSPAEGR LKQQGVLALRPYLQKQPQPSPAEGRAVTNE PYLQKQPQPSPAEGRAVTNEPEEEELATLS K Q P G R A 1 1 0 0 0 2 1 1 0 0 0 0 0 0 3 1 0 0 0 0 0 0 10 0 1065.5203 P56192 P56192 205 214 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.021977 85.862 By MS/MS By matching 4.33 0.471 2 1 2 1 5203400 5156300 47060 11229 1067 11883 28163;28164;28165 22546;22547 22546 2 425290 100270 QPQVAELLAEAR ______________________________ ALRQPQVAELLAEARRAFREEFGAEPELAV R Q P A R R 3 1 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 12 0 1323.7147 P51570 P51570 6 17 GALK1 Galactokinase yes yes 2 0.046766 71.03 By MS/MS 7 0 1 1 402250 402250 0 11230 997 11884 28166 22548 22548 1 6314.6 0 QPSADVLVATPGALWK EGGHGMRRIRLQLSRQPSADVLVATPGALW PSADVLVATPGALWKALKSRLISLEQLSFL R Q P W K A 3 0 0 1 0 1 0 1 0 0 2 1 0 0 2 1 1 1 0 2 0 0 16 0 1651.8934 Q9NUL7 Q9NUL7 253 268 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0005607 138.02 By MS/MS 6 0 1 1 0 0 0 11231 2582 11885 28167 22549 22549 0 0 0 QPSQGPTFGIK ALGAHLYQNVFACVRQPSQGPTFGIKGGAA ACVRQPSQGPTFGIKGGAAGGGYSQVIPME R Q P I K G 0 0 0 0 0 2 0 2 0 1 0 1 0 1 2 1 1 0 0 0 0 0 11 0 1158.6033 P11586 P11586 411 421 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.015301 95.483 By MS/MS 4 0 1 1 0 0 0 11232 582 11886 28168 22550 22550 0 0 0 QPSQGPTFGVK ALTAHLNVNSFACLRQPSQGPTFGVKGGAA ACLRQPSQGPTFGVKGGAAGGGYAQVIPME R Q P V K G 0 0 0 0 0 2 0 2 0 0 0 1 0 1 2 1 1 0 0 1 0 0 11 0 1144.5877 Q6UB35 Q6UB35 454 464 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00041997 143.5 By MS/MS 4 0 1 1 0 0 0 11233 1728 11887 28169 22551 22551 0 0 0 QPTIFQNK ______________________________ TERAYQKQPTIFQNKKRVLLGETGKEKLPR K Q P N K K 0 0 1 0 0 2 0 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 8 0 974.51853 P62280 P62280 13 20 RPS11 40S ribosomal protein S11 yes yes 2 0.015404 104.75 By MS/MS By matching 9.33 0.471 2 1 2 1 895230 856860 38377 11234 1152 11888 28170;28171;28172 22552 22552 1 37405 87512 QPTPQPPVDCVK ______________________________ QKKQPTPQPPVDCVKTSGGGGGGGGSGGGG K Q P V K T 0 0 0 1 1 2 0 0 0 0 0 1 0 0 4 0 1 0 0 2 0 0 12 0 1364.6758 P23490 P23490 7 18 LOR Loricrin yes yes 2 0.020015 96.113 By MS/MS 7 3 1 1 2 253320 0 253320 11235 705 11889 28173;28174 22553;22554 22553 2 0 423860 QPVLSQTEAR GAYLAQPLLREVLEKQPVLSQTEARDLVER EVLEKQPVLSQTEARDLVERCMRVLYYRDA K Q P A R D 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 1127.5935 P28070 P28070 202 211 PSMB4 Proteasome subunit beta type-4 yes yes 2 0.001315 117.53 By MS/MS By matching 8.33 0.471 2 1 2 1 2901300 2867700 33547 11236 749 11890 28175;28176;28177 22555;22556 22555 2 36205 45270 QPVYVVDVSK FGPIPLGSLGWKTVKQPVYVVDVSKGIVNA WKTVKQPVYVVDVSKGIVNAVKDPDANGKS K Q P S K G 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 1 4 0 0 10 0 1132.6128 Q16795 Q16795 238 247 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.031347 81.338 By MS/MS 7 0 1 1 3307900 3307900 0 11237 1559 11891 28178 22557 22557 1 51928 0 QPYAVSELAGHQTSAESWGTGR DIVNFVHTNLRKNNRQPYAVSELAGHQTSA LAGHQTSAESWGTGRAVARIPRVRGGGTHR R Q P G R A 3 1 0 0 0 2 2 3 1 0 1 0 0 0 1 3 2 1 1 1 0 0 22 0 2331.088 P36578 P36578 50 71 RPL4 60S ribosomal protein L4 yes yes 3 0.032191 62.167 By MS/MS 6 0 1 1 2362000 2362000 0 11238 838 11892 28179 22558 22558 1 16237 0 QQAELEAFENR KEAEAKAALEEEKRRQQAELEAFENRLKGR EKRRQQAELEAFENRLKGRRKKNRKRDEVA R Q Q N R L 2 1 1 0 0 2 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 11 0 1333.6262 Q6ZNB6 Q6ZNB6 853 863 NFXL1 NF-X1-type zinc finger protein NFXL1 yes yes 2 2.3332E-05 160.75 By MS/MS 4.67 2.75 1 1 1 1 1 1 6 3569400 3569400 0 11239 1741 11893 28180;28181;28182;28183;28184;28185 22559;22560;22561;22562;22563;22564 22559 6 283070 0 QQDVFMFLTNR HSKLDPDMAFCANIRQQDVFMFLTNRHTLG ANIRQQDVFMFLTNRHTLGHLLSLDSYRTT R Q Q N R H 0 1 1 1 0 2 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 11 0 1397.6762 Q02809 Q02809 489 499 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.0091098 93.058 By MS/MS 5 0 1 1 166310 166310 0 11240 1280 11894 28186 22565 22565 1 1668 0 QQEALEEQAALEPK QSQLLALKKELMVQKQQEALEEQAALEPKL KQQEALEEQAALEPKLDLLLEKTKELQKLI K Q Q P K L 3 0 0 0 0 3 4 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 14 0 1582.7839 Q96JB5 Q96JB5 458 471 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 4.1034E-11 234.87 By MS/MS 5 0 1 1 2913200 2913200 0 11241 2177 11895 28187 22566 22566 1 29218 0 QQEELDALKK ADLLQTKLQQSSYHKQQEELDALKKTIEES SSYHKQQEELDALKKTIEESEETLKNTKEI K Q Q K K T 1 0 0 1 0 2 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1200.635 O95347 O95347 741 750 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.015231 99.973 By MS/MS By matching 3 0 2 1 1 0 0 0 11242 405 11896 28188;28189 22567 22567 0 0 0 QQEELDRK TPQAVVSAAQAGLLRQQEELDRKAAELERK AQAGLLRQQEELDRKAAELERKERELQNTV R Q Q R K A 0 1 0 1 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1044.52 O15127 O15127 88 95 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.04726 96.034 By MS/MS 7 0 1 1 0 0 0 11243 162 11897 28190 22568 22568 0 0 0 QQEFADTLLPDSEAFQGK NTQDTVRFVHVYSNRQQEFADTLLPDSEAF FADTLLPDSEAFQGKSAVSILERRNTAGRV R Q Q G K S 2 0 0 2 0 3 2 1 0 0 2 1 0 2 1 1 1 0 0 0 0 0 18 0 2022.9535 Q9Y2G8 Q9Y2G8 427 444 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 1.7931E-87 388 By MS/MS 4.5 0.5 1 1 2 1303000 1303000 0 11244 2827 11898 28191;28192 22569;22570 22569 2 88850 0 QQEILGVLVPR SFVSQVLGKACVHGRQQEILGVLVPRLAAL VHGRQQEILGVLVPRLAALTQGSYLHQRVC R Q Q P R L 0 1 0 0 0 2 1 1 0 1 2 0 0 0 1 0 0 0 0 2 0 0 11 0 1250.7347 Q9Y4R8 Q9Y4R8 227 237 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 1.4132E-06 185.6 By MS/MS 5 0.816 1 1 1 3 2693100 2693100 0 11245 2900 11899 28193;28194;28195 22571;22572 22571 2 218220 0 QQENMQR TSKQQQQKHQYQQRRQQENMQRQSRGEPPL KHQYQQRRQQENMQRQSRGEPPLPEEDLSK R Q Q Q R Q 0 1 1 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 7 0 932.41341 O15372 O15372 282 288 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.043702 94.407 By MS/MS 7 0 1 1 2109000 2109000 0 11246 186 11900 28196 22573 22573 1 33107 0 QQEQPAATK ______________________________ ETSALKQQEQPAATKIRNLPWVEKYRPQTL K Q Q T K I 2 0 0 0 0 3 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 9 0 999.49852 P40937 P40937 8 16 RFC5 Replication factor C subunit 5 yes yes 2 0.039585 80.455 By MS/MS 6.5 0.5 1 1 2 690500 690500 0 11247 863 11901 28197;28198 22574 22574 1 8868.3 0 QQEQQVPILEK GVHISGLHTESAPRRQQEQQVPILEKFCFT APRRQQEQQVPILEKFCFTPHTEEGCLSER R Q Q E K F 0 0 0 0 0 4 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 11 0 1338.7143 P49327 P49327 1106 1116 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 9.8159E-10 221.68 By MS/MS 2.5 0.957 1 2 2 1 6 7025500 7025500 0 11248 946 11902;11903 28199;28200;28201;28202;28203;28204 22575;22576;22577;22578 22575 2 1505400 0 QQEVVVAGSSLPTSSK LYQVQLAQQQAALQKQQEVVVAGSSLPTSS QEVVVAGSSLPTSSKVNATVPSNMMSVNGQ K Q Q S K V 1 0 0 0 0 2 1 1 0 0 1 1 0 0 1 4 1 0 0 3 0 0 16 0 1615.8417 Q9H3P7 Q9H3P7 307 322 ACBD3 Golgi resident protein GCP60 yes yes 2 7.3302E-44 325.74 By MS/MS 5 0 1 1 2311200 2311200 0 11249 2440 11904 28205 22579 22579 1 23180 0 QQFEETVR FQTKFPAELENRIDRQQFEETVRTLNNLYA LENRIDRQQFEETVRTLNNLYAEAEKLGGQ R Q Q V R T 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 1035.4985 Q7Z5G4 Q7Z5G4 41 48 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.0059503 121.09 By MS/MS 10 0 1 1 325530 325530 0 11250 1797 11905 28206 22580 22580 1 17545 0 QQGVLALRPYLQK STQEPCQRAAETVLKQQGVLALRPYLQKQP LKQQGVLALRPYLQKQPQPSPAEGRAVTNE K Q Q Q K Q 1 1 0 0 0 3 0 1 0 0 3 1 0 0 1 0 0 0 1 1 0 0 13 1 1512.8776 P56192 P56192 192 204 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.00011819 186.41 By MS/MS 4 0 2 2 655110 655110 0 11251 1067 11906;11907 28207;28208 22581;22582 22581 1 61651 0 QQHVIETLIGK ALGIDCLHKGTNDMKQQHVIETLIGKKQQI NDMKQQHVIETLIGKKQQISLATQMVRMIL K Q Q G K K 0 0 0 0 0 2 1 1 1 2 1 1 0 0 0 0 1 0 0 1 0 0 11 0 1264.7139 P48643 P48643 503 513 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 6.0619E-05 150.81 By MS/MS 6.4 0.49 3 2 5 25375000 25375000 0 11252 940 11908;11909 28209;28210;28211;28212;28213 22583;22584;22585 22583 2 184430 0 QQIAEIEKQTK DIILGMEISAPSQQRQQIAEIEKQTKEQSQ SQQRQQIAEIEKQTKEQSQLTATQTRTVNK R Q Q T K E 1 0 0 0 0 3 2 0 0 2 0 2 0 0 0 0 1 0 0 0 0 0 11 1 1314.7143 Q6P2Q9 Q6P2Q9 2024 2034 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.014715 109.16 By MS/MS 2 0 1 1 0 0 0 11253 1708 11910 28214 22586 22586 0 0 0 QQICNQQPPCSR FFMPEICKSYKGEGRQQICNQQPPCSRLHI EGRQQICNQQPPCSRLHICDHFTRGNCRFP R Q Q S R L 0 1 1 0 2 4 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1514.6718 Q7Z2W4 Q7Z2W4 159 170 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 5.9936E-05 164.33 By MS/MS 4.75 0.829 2 1 1 4 5172400 5172400 0 11254 1778 11911;11912 28215;28216;28217;28218 22587;22588 22587 1 394120 0 QQIKPAVTIK LEWRLDVQLASRSLRQQIKPAVTIKLHLNQ SRSLRQQIKPAVTIKLHLNQNGDHNTKVLQ R Q Q I K L 1 0 0 0 0 2 0 0 0 2 0 2 0 0 1 0 1 0 0 1 0 0 10 1 1124.6917 Q86X83 Q86X83 142 151 COMMD2 COMM domain-containing protein 2 yes yes 2 0.043714 96.668 By MS/MS 9 0 1 1 0 0 0 11255 1841 11913 28219 22589 22589 0 0 0 QQIQNDLNQWK LEAETRVKQRLECEKQQIQNDLNQWKTQYS ECEKQQIQNDLNQWKTQYSRKEEAIRKIES K Q Q W K T 0 0 2 1 0 4 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 11 0 1413.7001 P15924 P15924 1858 1868 DSP Desmoplakin yes yes 2 2.0751E-08 188.87 By MS/MS 3 0 1 1 199270 0 199270 11256 628 11914 28220 22590 22590 1 0 25364 QQIQSIQQSIER VIACSVTIKEGSQLKQQIQSIQQSIERLLV QLKQQIQSIQQSIERLLV____________ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 0 12 0 1456.7634 P55769 P55769 114 125 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 4.3204E-05 169.65 By MS/MS 10 0 2 2 1074000 1074000 0 11257 1061 11915;11916 28221;28222 22591;22592;22593 22591 1 57882 0 QQISLATQMVR DMKQQHVIETLIGKKQQISLATQMVRMILK IGKKQQISLATQMVRMILKIDDIRKPGESE K Q Q V R M 1 1 0 0 0 3 0 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 11 0 1273.6813 P48643 P48643 515 525 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0028247 109.66 By MS/MS 6.33 0.471 2 1 3 12859000 12859000 0 11258 940 11917;11918 28223;28224;28225 22594;22595 22595 496 2 90217 0 QQKPTLSGQR ______________________________ MNNQKQQKPTLSGQRFKTRKRDEKERFDPT K Q Q Q R F 0 1 0 0 0 3 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 1 1141.6204 Q7L1Q6 Q7L1Q6 6 15 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.0016252 138.08 By MS/MS 7 0 1 1 0 0 0 11259 1760 11919 28226 22596 22596 0 0 0 QQLDSCVTK AKDSIDAGSKELQVKQQLDSCVTKCVDDHM KELQVKQQLDSCVTKCVDDHMHLIPTMTKK K Q Q T K C 0 0 0 1 1 2 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 9 0 1077.5125 Q96C01 Q96C01 105 113 FAM136A Protein FAM136A yes yes 2 0.050125 85.161 By MS/MS 10 0 1 1 0 0 0 11260 2118 11920 28227 22597 22597 1 0 0 QQLFQELK LRLLFLLTALRTDVRQQLFQELKGVRLLTD ALRTDVRQQLFQELKGVRLLTDTLELTLGV R Q Q L K G 0 0 0 0 0 3 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1032.5604 Q9NPQ8 Q9NPQ8 180 187 RIC8A Synembryn-A yes yes 2 0.021009 98.523 By MS/MS 5 0 1 1 896680 896680 0 11261 2535 11921 28228 22598 22598 1 8993.2 0 QQLGIEKEAVLLNLK AFVNSCYIKSEEAKRQQLGIEKEAVLLNLK QQLGIEKEAVLLNLKSNQELSEQGTSFSQT R Q Q L K S 1 0 1 0 0 2 2 1 0 1 4 2 0 0 0 0 0 0 0 1 0 0 15 1 1694.9931 Q9H9J2 Q9H9J2 106 120 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 1.1946E-06 208.08 By MS/MS 8 0 1 1 0 0 0 11262 2487 11922 28229 22599 22599 0 0 0 QQLLIGAYAK LSKYLRDYSRTIPGKQQLLIGAYAKALEII TIPGKQQLLIGAYAKALEIIPRQLCDNAGF K Q Q A K A 2 0 0 0 0 2 0 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1103.6339 Q99832 Q99832 431 440 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00065589 130.27 By MS/MS 6.44 2.17 1 1 1 2 1 1 1 1 9 34193000 34193000 0 11263 2270 11923;11924 28230;28231;28232;28233;28234;28235;28236;28237;28238 22600;22601 22600 1 283110 0 QQLNGDLSR Q Q S R 0 1 1 1 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1029.5203 REV__Q5VYJ5 yes yes 2 0.011155 98.418 By MS/MS 3 0 1 1 110000 110000 0 + 11264 2969 11925 28239 22602 22602 1 2012.7 0 QQLTNTEVR WRIQRMLAITANTLRQQLTNTEVRRLEKNV TANTLRQQLTNTEVRRLEKNVKEVLEDFAE R Q Q V R R 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 1087.5622 O60313 O60313 896 904 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0016968 125.16 By MS/MS 4.5 0.5 1 1 2 1191100 1191100 0 11265 254 11926 28240;28241 22603 22603 1 90696 0 QQLVASHLEK KLTPVLLAKQLAALKQQLVASHLEKLLGPD LAALKQQLVASHLEKLLGPDAAINLTDPDG K Q Q E K L 1 0 0 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1151.6299 Q13561 Q13561 147 156 DCTN2 Dynactin subunit 2 yes yes 2 0.02209 85.807 By MS/MS 6 0 1 1 1884000 1884000 0 11266 1397 11927 28242 22604 22604 1 12951 0 QQMLENQMEVR DYGKDLTSVNILLKKQQMLENQMEVRKKEI LLKKQQMLENQMEVRKKEIEELQSQAQALS K Q Q V R K 0 1 1 0 0 3 2 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 11 0 1404.649 Q01082 Q01082 1422 1432 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 2 0.050265 69.825 By MS/MS 8 0 1 1 1201200 1201200 0 11267 1265 11928 28243 22605 22605 1 15166 0 QQNLPVTR GSQFVMEGVKNLVLKQQNLPVTRILDNLME VKNLVLKQQNLPVTRILDNLMEMKSNPETD K Q Q T R I 0 1 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 8 0 954.52468 Q8WVM8 Q8WVM8 542 549 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.023363 95.909 By MS/MS 5.5 0.5 1 1 2 6490900 6490900 0 11268 2028 11929 28244;28245 22606 22606 1 62845 0 QQPDTELEIQQK VLLPQTSFPMKLLGRQQPDTELEIQQKCGF LGRQQPDTELEIQQKCGFSELYSWQRERKV R Q Q Q K C 0 0 0 1 0 4 2 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 12 0 1455.7205 Q9NSE4 Q9NSE4 79 90 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 1.7933E-08 206.73 By MS/MS 4.33 0.471 2 1 3 4696900 4696900 0 11269 2570 11930;11931 28246;28247;28248 22607;22608 22607 1 419020 0 QQPLFVSGGDDYK FDEHDGPVRGIDFHKQQPLFVSGGDDYKIK HKQQPLFVSGGDDYKIKVWNYKLRRCLFTL K Q Q Y K I 0 0 0 2 0 2 0 2 0 0 1 1 0 1 1 1 0 0 1 1 0 0 13 0 1452.6885 P53621 P53621 62 74 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0013999 118.9 By MS/MS 2 0.816 1 1 1 3 1665700 1665700 0 11270 1034 11932 28249;28250;28251 22609;22610 22610 2 181340 0 QQQDEAYLASLR ERLEREERNQTQVLRQQQDEAYLASLRADQ VLRQQQDEAYLASLRADQEKERKKREERER R Q Q L R A 2 1 0 1 0 3 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 12 0 1420.6947 Q96CS3 Q96CS3 291 302 FAF2 FAS-associated factor 2 yes yes 2 0.00095371 126.03 By MS/MS By matching 6.33 0.471 2 1 2 1 12880000 12809000 70434 11271 2126 11933 28252;28253;28254 22611;22612 22612 2 110150 72175 QQQDEAYLASLRADQEKER ERLEREERNQTQVLRQQQDEAYLASLRADQ EAYLASLRADQEKERKKREERERKRRKEEE R Q Q E R K 3 2 0 2 0 4 3 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 19 2 2277.0986 Q96CS3 Q96CS3 291 309 FAF2 FAS-associated factor 2 yes yes 3 0.00016961 118.5 By MS/MS 6.5 0.5 1 1 2 0 0 0 11272 2126 11934 28255;28256 22613;22614 22613 0 0 0 QQQEELEAEHGTGDKPAAPR YVGPRLSRRILQQARQQQEELEAEHGTGDK LEAEHGTGDKPAAPRERTTRLGPRMPQDGS R Q Q P R E 3 1 0 1 0 3 4 2 1 0 1 1 0 0 2 0 1 0 0 0 0 0 20 1 2190.0301 Q13895 Q13895 64 83 BYSL Bystin yes yes 3;4 2.1672E-05 116.61 By MS/MS 6 0 2 2 5582200 5582200 0 11273 1413 11935;11936 28257;28258 22615;22616 22616 1 38373 0 QQQELDGSLKK LAQSQHAQEQEFVQKQQQELDGSLKKIIQQ FVQKQQQELDGSLKKIIQQQKAELANIERE K Q Q K K I 0 0 0 1 0 3 1 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1272.6674 Q9H2G2 Q9H2G2 967 977 SLK STE20-like serine/threonine-protein kinase yes yes 3 0.00013211 185.6 By MS/MS 2 0 1 1 458740 458740 0 11274 2429 11937 28259 22617 22617 1 155160 0 QQQEQLLK GYPKYQKSLPPRFQRQQQEQLLKQQQQHQW LPPRFQRQQQEQLLKQQQQHQWQQHQQGSA R Q Q L K Q 0 0 0 0 0 4 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 1013.5506 P48634 P48634 650 657 PRRC2A Protein PRRC2A yes yes 2 0.051818 81.784 By MS/MS 2 0.816 1 1 1 3 2043600 2043600 0 11275 938 11938 28260;28261;28262 22618 22618 1 557060 0 QQQFENLDQQLR MTIKMNESDAWFEEKQQQFENLDQQLRKLH EEKQQQFENLDQQLRKLHVSVEALVCHRKE K Q Q L R K 0 1 1 1 0 5 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1545.7536 O60749 O60749 310 321 SNX2 Sorting nexin-2 yes yes 2 1.3139E-12 246.93 By MS/MS 5 0 1 1 2072200 2072200 0 11276 274 11939 28263 22619;22620 22620 2 20784 0 QQQLLNEENLR YQDKLARQRYEDQLKQQQLLNEENLRKQEE DQLKQQQLLNEENLRKQEESVQKQEAMRRA K Q Q L R K 0 1 2 0 0 3 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1383.7106 Q9NVI7;Q5T9A4 Q5T9A4 147 157 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 1.9117E-05 176.6 By MS/MS By MS/MS 5.67 0.745 3 2 1 4 2 23768000 23522000 245970 11277 2598;1638 11940;11941 28264;28265;28266;28267;28268;28269 22621;22622;22623;22624 22624 3 231620 215920 QQQLTAMK ACCRGYLARKAFAKRQQQLTAMKVLQRNCA RKAFAKRQQQLTAMKVLQRNCAAYLKLRNW R Q Q M K V 1 0 0 0 0 3 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 8 0 946.4906 P35579 P35579 803 810 MYH9 Myosin-9 no no 2 0.032507 89.142 By MS/MS 2 0 2 2 325560 325560 0 11278 824 11942;11943 28270;28271 22625;22626 22625 414 2 110120 0 QQQNSNIFFLADR VDELSNLKKNRKVYRQQQNSNIFFLADRTE YRQQQNSNIFFLADRTEMLSESKNILDELK R Q Q D R T 1 1 2 1 0 3 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 13 0 1579.7743 L0R819 L0R819 53 65 ASNSD1 yes yes 2 0.0001592 167.2 By MS/MS 10 0 1 1 146130 146130 0 11279 79 11944 28272 22627;22628;22629 22629 3 7875.6 0 QQQPPPETFDFK VNRELTNQQEASVERQQQPPPETFDFKIKF VERQQQPPPETFDFKIKFAETKAHAKAIEM R Q Q F K I 0 0 0 1 0 3 1 0 0 0 0 1 0 2 3 0 1 0 0 0 0 0 12 0 1460.6936 Q14203 Q14203 545 556 DCTN1 Dynactin subunit 1 yes yes 2 4.2618E-05 169.76 By MS/MS 3 0 2 2 1421800 1421800 0 11280 1432 11945;11946 28273;28274 22630;22631 22630 1 26015 0 QQQQIEAQQQLLATK RMDLTLAELQEMASRQQQQIEAQQQLLATK QQQQIEAQQQLLATKEQRLKFLKQQDQRQQ R Q Q T K E 2 0 0 0 0 7 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1753.9323 Q13625 Q13625 138 152 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 4.5456E-11 237.07 By MS/MS 3 0 1 1 731420 731420 0 11281 1406 11947 28275 22632 22632 1 13383 0 QQQQQQQEQLYK QEFKYQKSLPPRFQRQQQQQQQEQLYKMQH FQRQQQQQQQEQLYKMQHWQPVYPPPSHPQ R Q Q Y K M 0 0 0 0 0 8 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 12 0 1575.7641 Q5JSZ5 Q5JSZ5 631 642 PRRC2B Protein PRRC2B yes yes 2 2.0195E-06 201.33 By MS/MS 2 0.816 1 1 1 3 870270 870270 0 11282 1609 11948 28276;28277;28278 22633;22634 22634 2 225040 0 QQQQQQQHQQPNR SLLEIQQEEARQMQKQQQQQQQHQQPNRAR QKQQQQQQQHQQPNRARNNTHSNLHTSIGN K Q Q N R A 0 1 1 0 0 9 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 13 0 1674.7935 Q6Y7W6 Q6Y7W6 1016 1028 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2;3 0.0010942 141.48 By MS/MS 2.5 0.5 2 2 4 197600 197600 0 11283 1738 11949 28279;28280;28281;28282 22635;22636;22637 22636 3 23192 0 QQQVDIPLR QPRQGSPVAAGAPAKQQQVDIPLRLLVPTQ AGAPAKQQQVDIPLRLLVPTQYVGAIIGKE K Q Q L R L 0 1 0 1 0 3 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 9 0 1095.6037 Q9NZI8 Q9NZI8 191 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.010746 99.136 By MS/MS 5 0 1 1 2785100 2785100 0 11284 2649 11950 28283 22638 22638 1 27934 0 QQSEEDLLLQDFSR ______________________________ KQQSEEDLLLQDFSRNLSAKSSALFFGNAF K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 Q9UNL2 Q9UNL2 9 22 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 1.7682E-16 251.75 By MS/MS 6.73 3.28 1 1 1 1 6 1 11 8085500 8085500 0 11285 2790 11951;11952 28284;28285;28286;28287;28288;28289;28290;28291;28292;28293;28294 22639;22640;22641;22642;22643;22644;22645;22646;22647;22648;22649;22650 22646 11 226300 0 QQSEISAAVER QQVADEDEIWKQRRRQQSEISAAVERARKR QRRRQQSEISAAVERARKRREEEERRMEEQ R Q Q E R A 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1216.6048 Q9Y520 Q9Y520 451 461 PRRC2C Protein PRRC2C yes yes 2 0.0089214 93.556 By MS/MS 2.5 1.12 1 1 1 1 4 2642000 2642000 0 11286 2905 11953 28295;28296;28297;28298 22651;22652 22652 2 581460 0 QQSIAGSADSKPIDVSR AKEKIEKKGEKKEKKQQSIAGSADSKPIDV SIAGSADSKPIDVSRLDLRIGCIITARKHP K Q Q S R L 2 1 0 2 0 2 0 1 0 2 0 1 0 0 1 4 0 0 0 1 0 0 17 1 1757.8908 Q12904 Q12904 138 154 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2;3 3.676E-10 222.56 By MS/MS 7.4 0.49 3 2 5 5396800 5396800 0 11287 1337 11954;11955 28299;28300;28301;28302;28303 22653;22654;22655 22655 2 84153 0 QQTQHAVEGDCDIHVLK CHVLDPTPLANCSVRQQTQHAVEGDCDIHV TQHAVEGDCDIHVLKQDGQFSVLFTKCDSS R Q Q L K Q 1 0 0 2 1 3 1 1 2 1 1 1 0 0 0 0 1 0 0 2 0 0 17 0 1976.9374 CON__P12763 CON__P12763 104 120 yes yes 3;4 0.0017032 105.02 By MS/MS 6 0.816 3 3 3 9 8692600 8692600 0 + 11288 49 11956;11957 28304;28305;28306;28307;28308;28309;28310;28311;28312 22656;22657;22658;22659 22659 3 69888 0 QQTQPGFILLR LREGRLAVLMEAQCRQQTQPGFILLRETLL AQCRQQTQPGFILLRETLLGKVVALPDHLG R Q Q L R E 0 1 0 0 0 3 0 1 0 1 2 0 0 1 1 0 1 0 0 0 0 0 11 0 1299.7299 Q9Y4R8 Q9Y4R8 143 153 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.00097254 122.13 By MS/MS 4 0 2 2 2631500 2631500 0 11289 2900 11958;11959 28313;28314 22660;22661 22660 1 247640 0 QQTSLFIAR EDVLAVMDNKNPTIKQQTSLFIARSFRHCT KNPTIKQQTSLFIARSFRHCTASTLPKSLL K Q Q A R S 1 1 0 0 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 9 0 1062.5822 Q14008 Q14008 414 422 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0080709 103.83 By MS/MS 2 0.816 1 1 1 3 3139900 3139900 0 11290 1417 11960 28315;28316;28317 22662 22662 1 892010 0 QQVADEDEIWK DRQAVPGRPGPFPSKQQVADEDEIWKQRRR FPSKQQVADEDEIWKQRRRQQSEISAAVER K Q Q W K Q 1 0 0 2 0 2 2 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 11 0 1359.6307 Q9Y520 Q9Y520 436 446 PRRC2C Protein PRRC2C yes yes 2 0.0004691 121.5 By MS/MS 5.11 2.77 1 1 1 1 1 1 1 1 1 9 262910000 262910000 0 11291 2905 11961 28318;28319;28320;28321;28322;28323;28324;28325;28326 22663 22663 1 3981200 0 QQVASLIGADPR HAYGWESEAAMERARQQVASLIGADPREII RARQQVASLIGADPREIIFTSGATESNNIA R Q Q P R E 2 1 0 1 0 2 0 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 12 0 1253.6728 Q9Y697 Q9Y697 108 119 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 2.0806E-06 196.88 By MS/MS 7 0 1 1 975170 975170 0 11292 2935 11962 28327 22664 22664 1 15308 0 QQVEALYR CRLFQTAITRAKEKRQQVEALYRLQGQKEP TRAKEKRQQVEALYRLQGQKEPGDQGPAHP R Q Q Y R L 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 1005.5243 Q9Y399 Q9Y399 265 272 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0055942 122.74 By MS/MS By matching 8.75 0.829 2 1 1 3 1 9411400 9340600 70791 11293 2860 11963 28328;28329;28330;28331 22665;22666 22665 2 119510 95529 QQVPSGESAILDR VCSTNDLKELLIFNKQQVPSGESAILDRVA NKQQVPSGESAILDRVADGMVFGALLPCEE K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00042048 145.23 By MS/MS 3.5 0.5 2 2 4 11049000 11049000 0 11294 543 11964;11965 28332;28333;28334;28335 22667;22668;22669;22670;22671 22667 2 789760 0 QRAEVLQSTQR QAQAALKAEQDMKAKQRAEVLQSTQRFFSE MKAKQRAEVLQSTQRFFSEQQQSKQIGGGK K Q R Q R F 1 2 0 0 0 3 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 11 1 1314.7004 Q9Y520 Q9Y520 2813 2823 PRRC2C Protein PRRC2C yes yes 2 0.040511 112.94 By MS/MS 1 0 1 1 0 0 0 11295 2905 11966 28336 22672 22672 0 0 0 QREEEERQQQEEALR EALRRQREQEIALRRQREEEERQQQEEALR QREEEERQQQEEALRRLEERRREEEERRKQ R Q R L R R 1 3 0 0 0 4 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 15 2 1956.9249 Q6Y7W6 Q6Y7W6 807 821 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.016397 84.352 By MS/MS 2 0 1 1 260600 260600 0 11296 1738 11967 28337 22673 22673 1 88145 0 QRELEIEER QERVKKLEEVERKKRQRELEIEERERRREE VERKKRQRELEIEERERRREEERRLGDSSL R Q R E R E 0 2 0 0 0 1 4 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1200.6099 Q14152 Q14152 860 868 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00042327 159.28 By MS/MS By matching 3.11 0.737 2 4 3 8 1 7245100 7186400 58751 11297 1422 11968;11969 28338;28339;28340;28341;28342;28343;28344;28345;28346 22674;22675;22676;22677;22678;22679 22676 4 254470 7478.2 QRELEIEERER QERVKKLEEVERKKRQRELEIEERERRREE RKKRQRELEIEERERRREEERRLGDSSLSR R Q R E R R 0 3 0 0 0 1 5 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 2 1485.7536 Q14152 Q14152 860 870 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3;4 8.7606E-13 267.29 By MS/MS By matching 3.07 0.961 1 2 7 3 1 13 1 31097000 31097000 0 11298 1422 11970;11971 28347;28348;28349;28350;28351;28352;28353;28354;28355;28356;28357;28358;28359;28360 22680;22681;22682;22683;22684;22685;22686 22683 4 1176800 0 QREQEIALRR EEELARRKQEEALRRQREQEIALRRQREEE EALRRQREQEIALRRQREEEERQQQEEALR R Q R R R Q 1 3 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 10 2 1297.7215 Q6Y7W6 Q6Y7W6 797 806 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.007605 98.044 By MS/MS 3 0 1 1 0 0 0 11299 1738 11972 28361 22687 22687 1 0 0 QRESDITKER VQVVITDPEKLDQIRQRESDITKERIQKIL LDQIRQRESDITKERIQKILATGANVILTT R Q R E R I 0 2 0 1 0 1 2 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 10 2 1260.6422 P17987 P17987 265 274 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 9.8048E-07 205.59 By MS/MS 6.14 0.639 1 4 2 7 16202000 16202000 0 11300 648 11973;11974 28362;28363;28364;28365;28366;28367;28368 22688;22689;22690;22691;22692 22689 3 125020 0 QRGDQLVPFSTK DPDLGPAHVVTVIARQRGDQLVPFSTKSGD IARQRGDQLVPFSTKSGDTLLLLHHGDFSA R Q R T K S 0 1 0 1 0 2 0 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 1 1374.7256 Q9BTV4 Q9BTV4 267 278 TMEM43 Transmembrane protein 43 yes yes 2 0.037662 95.618 By MS/MS 7 0 1 1 0 0 0 11301 2318 11975 28369 22693 22693 0 0 0 QRLEELKK AALKSRQEALEETLRQRLEELKKLCLREAE ALEETLRQRLEELKKLCLREAELTGKLPVE R Q R K K L 0 1 0 0 0 1 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 2 1042.6135 Q9P2Q2 Q9P2Q2 404 411 FRMD4A FERM domain-containing protein 4A yes yes 3 0.0033861 130.27 By MS/MS 3.5 1.5 1 1 2 1306800 1306800 0 11302 2688 11976 28370;28371 22694;22695 22695 2 114940 0 QRPAEIKDYSPYFK ANADLEVKIRDWYQRQRPAEIKDYSPYFKT RQRPAEIKDYSPYFKTIEDLRNKILTATVD R Q R F K T 1 1 0 1 0 1 1 0 0 1 0 2 0 1 2 1 0 0 2 0 0 0 14 2 1740.8835 CON__P02533;P02533 CON__P02533 154 167 KRT14 Keratin, type I cytoskeletal 14 yes no 3 0.0010642 113.54 By MS/MS By matching 4 2 1 1 1 1 1 3 2 0 0 0 + 11303 39 11977 28372;28373;28374;28375;28376 22696;22697 22696 0 0 0 QRPGQQVATCVR SPQIGDKVEFSISDKQRPGQQVATCVRLLG SDKQRPGQQVATCVRLLGRNSNSKRLLGYV K Q R V R L 1 2 0 0 1 3 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 12 1 1398.715 O75534 O75534 497 508 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 0.0003363 161.51 By MS/MS 4.5 0.5 3 3 6 7992000 7992000 0 11304 333 11978;11979 28377;28378;28379;28380;28381;28382 22698;22699;22700;22701;22702 22702 3 621620 0 QRPQATAEQIR GNWEQPQNQNQTQHKQRPQATAEQIRLAQM TQHKQRPQATAEQIRLAQMISDHNDADFEE K Q R I R L 2 2 0 0 0 3 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 11 1 1296.6898 Q14157 Q14157 27 37 UBAP2L Ubiquitin-associated protein 2-like yes yes 2;3 2.2284E-06 183.72 By MS/MS 3 0 3 3 2239400 2239400 0 11305 1424 11980;11981 28383;28384;28385 22703;22704;22705 22703 2 40975 0 QRPYGSHR ETERSRYQREIDKLRQRPYGSHRETQTECE REIDKLRQRPYGSHRETQTECEWTVDTSKL R Q R H R E 0 2 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 999.49986 P15924 P15924 1944 1951 DSP Desmoplakin yes yes 3 0.041111 98.629 By MS/MS 2 0 1 1 88185 88185 0 11306 628 11982 28386 22706 22706 1 29828 0 QRYEDQLK RQHQARAQYQDKLARQRYEDQLKQQQLLNE YQDKLARQRYEDQLKQQQLLNEENLRKQEE R Q R L K Q 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 1 1078.5407 Q9NVI7;Q5T9A4 Q5T9A4 139 146 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2;3 0.02759 112.41 By MS/MS By matching 5 0 3 2 1 6858500 6796600 61821 11307 2598;1638 11983 28387;28388;28389 22707;22708 22708 2 68167 51916 QRYEDQLKQQQLLNEENLR RQHQARAQYQDKLARQRYEDQLKQQQLLNE DQLKQQQLLNEENLRKQEESVQKQEAMRRA R Q R L R K 0 2 2 1 0 5 3 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 19 2 2444.2408 Q9NVI7;Q5T9A4 Q5T9A4 139 157 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 3;4 1.3429E-05 193.27 By MS/MS 5.5 0.5 3 3 6 25477000 25477000 0 11308 2598;1638 11984;11985 28390;28391;28392;28393;28394;28395 22709;22710;22711 22711 2 243510 0 QSAESVSKGGEK RKIKEGVEEAAKTAKQSAESVSKGGEKLGR TAKQSAESVSKGGEKLGRTAAFRALSQGVE K Q S E K L 1 0 0 0 0 1 2 2 0 0 0 2 0 0 0 3 0 0 0 1 0 0 12 1 1205.5888 O43615 O43615 158 169 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 3.9201E-11 209.8 By MS/MS 7.33 0.471 2 1 3 0 0 0 11309 221 11986;11987 28396;28397;28398 22712;22713 22713 1 0 0 QSAGAVVIILPR RLLDFSYEQYQKALRQSAGAVVIILPRAMA ALRQSAGAVVIILPRAMAAVPQDVVRQFME R Q S P R A 2 1 0 0 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1222.7398 Q969V3 Q969V3 103 114 NCLN Nicalin yes yes 2 0.00026713 146.11 By MS/MS 6 0 1 1 957030 957030 0 11310 2096 11988 28399 22714 22714 1 6578.8 0 QSDELALVR ESQSQLDAAKSEAQKQSDELALVRQQLSEM KSEAQKQSDELALVRQQLSEMKSHVEDGDI K Q S V R Q 1 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1029.5455 Q9P2E9 Q9P2E9 1247 1255 RRBP1 Ribosome-binding protein 1 yes yes 2 0.0079434 111.65 By MS/MS 3 0 1 1 658950 658950 0 11311 2682 11989 28400 22715 22715 1 12057 0 QSDTSGPVTTSK PLSPKKGSEASAASRQSDTSGPVTTSKSSS ASRQSDTSGPVTTSKSSSLGSFYHLPSYLK R Q S S K S 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 3 3 0 0 1 0 0 12 0 1206.5728 P42858 P42858 1212 1223 HTT Huntingtin yes yes 2 0.018365 86.114 By MS/MS 1.5 0.5 1 1 2 252800 252800 0 11312 890 11990 28401;28402 22716 22716 1 75295 0 QSDVMIVAGTLTNK YDMDRFGVVFRASPRQSDVMIVAGTLTNKM RQSDVMIVAGTLTNKMAPALRKVYDQMPEP R Q S N K M 1 0 1 1 0 1 0 1 0 1 1 1 1 0 0 1 2 0 0 2 0 0 14 0 1475.7654 O75251 O75251 116 129 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2;3 3.6525E-33 308.58 By MS/MS 9.2 0.4 4 1 5 3956600 3956600 0 11313 307 11991;11992;11993 28403;28404;28405;28406;28407 22717;22718;22719;22720;22721 22718 131 4 87231 0 QSEDLGSQFTEIFIK ISNEEEEEVEENSTRQSEDLGSQFTEIFIK QSEDLGSQFTEIFIKQQENVTLLLSLLEEF R Q S I K Q 0 0 0 1 0 2 2 1 0 2 1 1 0 2 0 2 1 0 0 0 0 0 15 0 1740.857 O60763 O60763 105 119 USO1 General vesicular transport factor p115 yes yes 2 6.2357E-07 204.32 By MS/MS 4 0 1 1 96091 96091 0 11314 276 11994 28408 22722;22723 22723 2 9042.8 0 QSEVPKPEDGEPPR TLRRPAYRDNQWNPRQSEVPKPEDGEPPRR RQSEVPKPEDGEPPRRHEQFIPIAADKRPP R Q S P R R 0 1 0 1 0 1 3 1 0 0 0 1 0 0 4 1 0 0 0 1 0 0 14 1 1563.7529 Q9Y520 Q9Y520 1379 1392 PRRC2C Protein PRRC2C yes yes 3 0.014857 82.362 By MS/MS 1.5 0.5 1 1 2 366390 366390 0 11315 2905 11995 28409;28410 22724 22724 1 109860 0 QSFLTEVEQLSR KRLKENADLEWTAVKQSFLTEVEQLSRFRH AVKQSFLTEVEQLSRFRHPNIVDFAGYCAQ K Q S S R F 0 1 0 0 0 2 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 12 0 1435.7307 P51617 P51617 254 265 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 3.4787E-13 245.13 By MS/MS 5 0 1 1 304200 304200 0 11316 1001 11996 28411 22725 22725 1 3050.9 0 QSGESIDIITR FILTAKYNACILEYKQSGESIDIITRAHGN LEYKQSGESIDIITRAHGNVQDRIGRPSET K Q S T R A 0 1 0 1 0 1 1 1 0 3 0 0 0 0 0 2 1 0 0 0 0 0 11 0 1217.6252 Q16531 Q16531 93 103 DDB1 DNA damage-binding protein 1 yes yes 2 0.00065257 128.51 By MS/MS 2 0.816 1 1 1 3 1053500 1053500 0 11317 1549 11997 28412;28413;28414 22726;22727;22728 22726 3 171590 0 QSGGAGQYGK ETITAPVPFDFTHKKQSGGAGQYGKVIGVL FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK K Q S G K V 1 0 0 0 0 2 0 4 0 0 0 1 0 0 0 1 0 0 1 0 0 0 10 0 951.44101 Q96RP9 Q96RP9 542 551 GFM1 Elongation factor G, mitochondrial yes yes 2 0.044638 74.92 By MS/MS 5.5 0.5 1 1 2 860030 860030 0 11318 2223 11998 28415;28416 22729 22729 1 8348.3 0 QSGSRGGSGGGGSISGGGYGSGGGSGGR GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R Q S G R Y 0 2 0 0 0 1 0 16 0 1 0 0 0 0 0 7 0 0 1 0 0 0 28 1 2255.9864 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 545 572 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 3.2819E-14 146.63 By MS/MS By MS/MS 4.5 2.78 1 1 2 1 1 1 1 1 7 2303900 283510 2020400 + 11319 55 11999 28417;28418;28419;28420;28421;28422;28423;28424 22730;22731;22732;22733;22734;22735;22736;22737;22738;22739;22740;22741 22731 12 5187.5 2444100 QSGYGGQTKPIFR KDSLYAQGKRRYDRKQSGYGGQTKPIFRKK RKQSGYGGQTKPIFRKKAKTTKKIVLRLEC K Q S F R K 0 1 0 0 0 2 0 3 0 1 0 1 0 1 1 1 1 0 1 0 0 0 13 1 1437.7365 P83881 P83881 45 57 RPL36A 60S ribosomal protein L36a no no 2 0.018254 107.34 By MS/MS 10 0 1 1 0 0 0 11320 1242 12000 28425 22742 22742 0 0 0 QSHGAAPCSGGSQ EFLSLLGDIATDYHKQSHGAAPCSGGSQ__ HKQSHGAAPCSGGSQ_______________ K Q S S Q - 2 0 0 0 1 2 0 3 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1242.5047 P31151;Q86SG5 P31151 89 101 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 2 3.7579E-20 234.63 By MS/MS By MS/MS 5.09 3.03 2 1 1 1 1 1 1 1 1 1 1 10 539220 34983 504240 11321 784 12001 28426;28427;28428;28429;28430;28431;28432;28433;28434;28435;28436 22743;22744;22745;22746;22747;22748;22749 22743 7 8429.7 627990 QSHLQAGVSK YSAISSSKKKELLKRQSHLQAGVSKLNEAK ELLKRQSHLQAGVSKLNEAKALVDELNRKA R Q S S K L 1 0 0 0 0 2 0 1 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1053.5567 Q8NCM8 Q8NCM8 2894 2903 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.054002 70.399 By MS/MS 1.5 0.5 1 1 2 130220 130220 0 11322 1952 12002 28437;28438 22750 22750 1 36894 0 QSIINPDWNFEK SSLNLIGKAKTKENRQSIINPDWNFEKMGI ENRQSIINPDWNFEKMGIGGLDKEFSDIFR R Q S E K M 0 0 2 1 0 1 1 0 0 2 0 1 0 1 1 1 0 1 0 0 0 0 12 0 1489.7201 P46459 P46459 206 217 NSF Vesicle-fusing ATPase yes yes 2 0.0002152 156.01 By MS/MS 5.5 0.5 2 2 4 3408200 3408200 0 11323 912 12003;12004 28439;28440;28441;28442 22751;22752 22752 1 31666 0 QSKPVTTPEEIAQVATISANGDK GVMLAVDAVIAELKKQSKPVTTPEEIAQVA EEIAQVATISANGDKEIGNIISDAMKKVGR K Q S D K E 3 0 1 1 0 2 2 1 0 2 0 2 0 0 2 2 3 0 0 2 0 0 23 1 2383.2231 P10809 P10809 158 180 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.0052292 71.756 By MS/MS 6 0 1 1 3016600 3016600 0 11324 569 12005 28443 22753 22753 1 20737 0 QSLEASLAETEGR VQALEIELQSQLALKQSLEASLAETEGRYC LKQSLEASLAETEGRYCVQLSQIQAQISAL K Q S G R Y 2 1 0 0 0 1 3 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 13 0 1389.6736 CON__P13645;P13645;CON__P02535-1 CON__P13645 387 399 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.1781E-38 291.5 By MS/MS By MS/MS 4.76 2.78 3 4 3 3 2 3 2 2 1 2 14 11 85080000 46756000 38324000 + 11325 50 12006;12007 28444;28445;28446;28447;28448;28449;28450;28451;28452;28453;28454;28455;28456;28457;28458;28459;28460;28461;28462;28463;28464;28465;28466;28467;28468 22754;22755;22756;22757;22758;22759;22760;22761;22762;22763;22764;22765;22766;22767;22768;22769;22770;22771;22772;22773 22760 18 3079100 18400000 QSLGHGQHGSGSGQSPSPSR SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS GQHGSGSGQSPSPSRGRHGSGSGQSSSYGP R Q S S R G 0 1 0 0 0 3 0 5 2 0 1 0 0 0 2 6 0 0 0 0 0 0 20 0 1946.8943 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 992 1011 HRNR Hornerin yes no 3 3.5118E-06 181.32 By MS/MS By MS/MS 4.09 2.47 1 3 1 3 1 1 1 7 4 5819100 1913300 3905800 + 11326 73 12008;12009 28469;28470;28471;28472;28473;28474;28475;28476;28477;28478;28479 22774;22775;22776;22777;22778;22779;22780;22781;22782;22783 22782 7 209470 1507600 QSLGHGR SGSSSSYGQHGSGSRQSLGHGRQGSGSRQS GQHGSGSRQSLGHGRQGSGSRQSPSHVRHG R Q S G R Q 0 1 0 0 0 1 0 2 1 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 753.38818 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 292 298 HRNR Hornerin yes no 2 0.022047 147.69 By MS/MS 3 0 1 1 1587100 0 1587100 + 11327 73 12010 28480 22784 22784 1 0 202010 QSLPPGLAVK YTLVITDKEKAEKLKQSLPPGLAVKELK__ AEKLKQSLPPGLAVKELK____________ K Q S V K E 1 0 0 0 0 1 0 1 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1008.5968 P63173 P63173 58 67 RPL38 60S ribosomal protein L38 yes yes 2 0.0013003 117.81 By MS/MS 10 0 1 1 2248600 2248600 0 11328 1197 12011 28481 22785;22786 22785 2 121190 0 QSNCVTLLDTNQVVR DTSFYRGKKKRGTPKQSNCVTLLDTNQVVR QSNCVTLLDTNQVVRILPPGEVPLKDIYPK K Q S V R I 0 1 2 1 1 2 0 0 0 0 2 0 0 0 0 1 2 0 0 3 0 0 15 0 1745.873 A3KMH1 A3KMH1 1413 1427 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 9.528E-24 276.12 By MS/MS 2.5 0.5 1 1 2 550140 550140 0 11329 14 12012 28482;28483 22787 22787 1 160600 0 QSRGEPPLPEEDLSK KHQYQQRRQQENMQRQSRGEPPLPEEDLSK QSRGEPPLPEEDLSKLFKPPQPPARMDSLL R Q S S K L 0 1 0 1 0 1 3 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 15 1 1680.8319 O15372 O15372 289 303 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 2.6859E-10 234.87 By MS/MS 7 0 2 2 2362100 2362100 0 11330 186 12013;12014 28484;28485 22788;22789 22788 1 37081 0 QSRLEQEEQQR HYALEDDPLAAFKQRQSRLEQEEQQRLAEL FKQRQSRLEQEEQQRLAELSKSNKQNLFLG R Q S Q R L 0 2 0 0 0 4 3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 11 1 1429.691 Q3ZCQ8 Q3ZCQ8 315 325 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 4.7378E-06 201.61 By MS/MS 8.43 1.4 3 1 3 7 19290000 19290000 0 11331 1580 12015;12016 28486;28487;28488;28489;28490;28491;28492 22790;22791;22792;22793;22794;22795 22791 4 355200 0 QSSEEEEKETR GSHGHGRQERSTKEKQSSEEEEKETRGVQK TKEKQSSEEEEKETRGVQKRRGGSTVPKDG K Q S T R G 0 1 0 0 0 1 5 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 11 1 1350.5899 Q92504 Q92504 274 284 SLC39A7 Zinc transporter SLC39A7 yes yes 3 0.037357 67.207 By MS/MS 7 0 1 1 462850 462850 0 11332 2048 12017 28493 22796 22796 1 7265.9 0 QSSFALLGDLTK TLMYQCMQDKMPEVRQSSFALLGDLTKACF EVRQSSFALLGDLTKACFQHVKPCIADFMP R Q S T K A 1 0 0 1 0 1 0 1 0 0 3 1 0 1 0 2 1 0 0 0 0 0 12 0 1278.682 Q92973;O14787 Q92973 693 704 TNPO1;TNPO2 Transportin-1;Transportin-2 yes no 2 1.6576E-08 208.17 By MS/MS 4.33 0.471 2 1 3 2991400 2991400 0 11333 2082 12018;12019 28494;28495;28496 22797;22798;22799;22800 22798 3 246130 0 QSSGASSSSFSSSR KSSRFSGGFGARDYRQSSGASSSSFSSSRA RQSSGASSSSFSSSRASSSRSGGGGHGSSR R Q S S R A 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 9 0 0 0 0 0 0 14 0 1360.5855 O00571 O00571 604 617 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.00025491 190.66 By MS/MS By MS/MS 5.46 2.5 1 1 1 5 1 1 1 1 1 11 2 43851000 43507000 344280 11334 116 12020;12021 28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508;28509 22801;22802;22803;22804;22805;22806;22807 22803 6 560110 289120 QSSGENCDVVVNTLGK ALGPEVANVAKFLCRQSSGENCDVVVNTLG SSGENCDVVVNTLGKRAPAFEGRILLNPQD R Q S G K R 0 0 2 1 1 1 1 2 0 0 1 1 0 0 0 2 1 0 0 3 0 0 16 0 1705.7941 P01833 P01833 273 288 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 2 0.0081017 106.58 By MS/MS 1 0 1 1 105790 0 105790 11335 451 12022 28510 22808;22809 22809 2 0 105790 QSSGHGRQGSGSGQSPSR SRSSSRYGQHGSGSRQSSGHGRQGSGSGQS GHGRQGSGSGQSPSRGRHGSGLGHSSSHGQ R Q S S R G 0 2 0 0 0 3 0 5 1 0 0 0 0 0 1 6 0 0 0 0 0 0 18 1 1755.7997 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1698 1715 HRNR Hornerin yes no 3 0.042636 61.477 By MS/MS 1.5 0.5 1 1 2 127540 0 127540 + 11336 73 12023 28511;28512 22810 22810 1 0 135340 QSSSEISLAVER PAPEDEDEAWRQRRKQSSSEISLAVERARR RRKQSSSEISLAVERARRRREEEERRMQEE K Q S E R A 1 1 0 0 0 1 2 0 0 1 1 0 0 0 0 4 0 0 0 1 0 0 12 0 1304.6572 P48634 P48634 455 466 PRRC2A Protein PRRC2A yes yes 2 6.2715E-05 163.46 By MS/MS 2.5 0.5 1 1 2 1153400 1153400 0 11337 938 12024 28513;28514 22811;22812 22811 2 318480 0 QSSSYGPHGYGSGR QSPSPSRGRHESGSRQSSSYGPHGYGSGRS RQSSSYGPHGYGSGRSSSRGPYESGSGHSS R Q S G R S 0 1 0 0 0 1 0 4 1 0 0 0 0 0 1 4 0 0 2 0 0 0 14 0 1438.6226 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 554 567 HRNR Hornerin yes no 2 0.010433 102.33 By MS/MS By matching 6.25 2.73 1 1 1 1 1 1 1 1 3 5 0 0 0 + 11338 73 12025 28515;28516;28517;28518;28519;28520;28521;28522 22813;22814 22813 0 0 0 QSSSYGQHESASR SGQASSSGQHGSSSRQSSSYGQHESASRHS SRQSSSYGQHESASRHSSGRGQHSSGSGQS R Q S S R H 1 1 0 0 0 2 1 1 1 0 0 0 0 0 0 5 0 0 1 0 0 0 13 0 1422.6124 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 396 408 HRNR Hornerin yes no 2;3 0.00078026 140.14 By MS/MS By MS/MS 3.08 1.54 3 2 2 4 1 1 4 9 2201700 471440 1730200 + 11339 73 12026;12027 28523;28524;28525;28526;28527;28528;28529;28530;28531;28532;28533;28534;28535 22815;22816;22817;22818;22819;22820 22820 5 42269 875630 QSSYGQHGSGSSQSSGYGQYGSR SGQSSGFGQHESRSRQSSYGQHGSGSSQSS SGSSQSSGYGQYGSRETSGFGQHGLGSGQS R Q S S R E 0 1 0 0 0 4 0 6 1 0 0 0 0 0 0 8 0 0 3 0 0 0 23 0 2350.9799 CON__Q5D862;Q5D862 CON__Q5D862 540 562 FLG2 Filaggrin-2 yes no 3 5.2466E-06 121.14 By matching By MS/MS 5.91 3.03 1 1 1 1 1 1 1 1 1 2 1 10 3644200 188820 3455400 + 11340 67 12028 28536;28537;28538;28539;28540;28541;28542;28543;28544;28545;28546 22821;22822;22823;22824;22825;22826;22827;22828;22829;22830;22831 22822 11 10177 2185000 QSVEADINGLR ADDFRLKYENEVALRQSVEADINGLRRVLD VALRQSVEADINGLRRVLDELTLTKADLEM R Q S L R R 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1200.6099 CON__P13645;P13645;CON__P02535-1;CON__Q2M2I5;Q2M2I5;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 CON__P13645 246 256 KRT10;KRT24;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 13 no no 2 2.3332E-05 163.38 By MS/MS By MS/MS 4.95 2.74 2 2 2 4 2 2 1 1 1 2 10 9 22116000 18664000 3452100 + 11341 50;603;51 12029;12030 28547;28548;28549;28550;28551;28552;28553;28554;28555;28556;28557;28558;28559;28560;28561;28562;28563;28564;28565 22832;22833;22834;22835;22836;22837;22838;22839;22840;22841;22842;22843;22844 22843 12 1397000 4215700 QSVEADINGLRR ADDFRLKYENEVALRQSVEADINGLRRVLD ALRQSVEADINGLRRVLDELTLTKADLEMQ R Q S R R V 1 2 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 12 1 1356.711 CON__P13645;P13645;CON__P02535-1;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 CON__P13645 246 257 KRT10;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 13 no no 2;3 5.2097E-08 188.91 By MS/MS By MS/MS 4.95 2.65 2 2 3 2 2 2 2 2 1 1 10 9 133400000 81075000 52325000 + 11342 50;603;51 12031;12032 28566;28567;28568;28569;28570;28571;28572;28573;28574;28575;28576;28577;28578;28579;28580;28581;28582;28583;28584 22845;22846;22847;22848;22849;22850;22851;22852;22853;22854;22855;22856;22857;22858;22859;22860 22846 15 5451300 13408000 QSVVMVEEWR TPPLALFLCGLLANRQSVVMVEEWRRPAGH LLANRQSVVMVEEWRRPAGHRRKDPGIIRY R Q S W R R 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 1 0 3 0 0 10 0 1261.6125 Q86XJ0 Q86XJ0 73 82 CALHM3 Calcium homeostasis modulator protein 3 yes yes 2 0.047339 47.869 By MS/MS 3 0 1 1 0 0 0 11343 1843 12033 28585 22861 22861 951 0 0 0 QSVYEEK LEDRDLFVMRLKAARQSVYEEKLKQFEERL VMRLKAARQSVYEEKLKQFEERLAEERHNR R Q S E K L 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 7 0 881.41306 Q14152 Q14152 769 775 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0057557 152.47 By MS/MS 3 0.816 1 1 1 3 6501400 6501400 0 11344 1422 12034 28586;28587;28588 22862;22863 22863 2 449490 0 QSVYEEKLK LEDRDLFVMRLKAARQSVYEEKLKQFEERL RLKAARQSVYEEKLKQFEERLAEERHNRLE R Q S L K Q 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 0 1 1 0 0 9 1 1122.5921 Q14152 Q14152 769 777 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.00075216 131.62 By MS/MS 3 0 1 1 1317900 1317900 0 11345 1422 12035 28589 22864 22864 1 24113 0 QTADFLQEYVTNK FHKEHFKYVGTKLPKQTADFLQEYVTNKTK PKQTADFLQEYVTNKTKKTEELRKTVEDLD K Q T N K T 1 0 1 1 0 2 1 0 0 0 1 1 0 1 0 0 2 0 1 1 0 0 13 0 1555.7518 Q9ULX6 Q9ULX6 427 439 AKAP8L A-kinase anchor protein 8-like yes yes 2 2.8704E-08 222.2 By MS/MS 4 0 2 2 782040 782040 0 11346 2778 12036;12037 28590;28591 22865;22866 22865 1 73595 0 QTAEETGLTPLETSR IISPPWDFREFEVEKQTAEETGLTPLETSR QTAEETGLTPLETSRKTPDSRPSLEETFEI K Q T S R K 1 1 0 0 0 1 3 1 0 0 2 0 0 0 1 1 4 0 0 0 0 0 15 0 1631.8002 Q13042 Q13042 573 587 CDC16 Cell division cycle protein 16 homolog yes yes 2 1.9736E-07 233.52 By MS/MS 5 0 1 1 1807600 1807600 0 11347 1347 12038 28592 22867 22867 1 18130 0 QTALVELLK ADICTLPDTEKQIKKQTALVELLKHKPKAT EKQIKKQTALVELLKHKPKATEEQLKTVME K Q T L K H 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1013.6121 CON__P02769 CON__P02769 549 557 yes yes 2 0.0022692 117.89 By MS/MS 5 0 1 1 1397700 1397700 0 + 11348 43 12039 28593 22868 22868 1 14018 0 QTALYTLK QRKKKEGEEEQAINRQTALYTLKLLCKNFG EEQAINRQTALYTLKLLCKNFGAENPDPFV R Q T L K L 1 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 2 0 1 0 0 0 8 0 936.52803 Q9H583 Q9H583 1668 1675 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 1 0.041459 79.474 By MS/MS 2 0 1 1 0 0 0 11349 2451 12040 28594 22869 22869 0 0 0 QTDVGITHFR MGHVLIPQSDLRWSKQTDVGITHFRSGMSH LRWSKQTDVGITHFRSGMSHEEDQLIPNLY K Q T F R S 0 1 0 1 0 1 0 1 1 1 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1172.5938 Q6P2Q9 Q6P2Q9 1345 1354 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0053547 110.39 By MS/MS 2 0.707 1 2 1 4 1101900 1101900 0 11350 1708 12041;12042 28595;28596;28597;28598 22870;22871;22872 22871 1 372720 0 QTDVLQQLSIQMANAK SFEWLSQMRFYFDPKQTDVLQQLSIQMANA TDVLQQLSIQMANAKFNYGFEYLGVQDKLV K Q T A K F 2 0 1 1 0 4 0 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 16 0 1786.9247 Q14204 Q14204 1850 1865 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 6.7859E-33 295.83 By MS/MS 1.33 0.471 2 1 3 209100 209100 0 11351 1433 12043;12044 28599;28600;28601 22873;22874 22873 836 1 62185 0 QTEDVAEVLNR RSYSSRNGSIPTYMRQTEDVAEVLNRCASS TYMRQTEDVAEVLNRCASSNWSERKEGLLG R Q T N R C 1 1 1 1 0 1 2 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1272.631 O75122 O75122 651 661 CLASP2 CLIP-associating protein 2 yes yes 2 2.8418E-13 273.44 By MS/MS 3 0.816 1 1 1 3 1367100 1367100 0 11352 292 12045 28602;28603;28604 22875 22875 1 71983 0 QTESLESLLSK HVEDGVLSMQVASARQTESLESLLSKSQEH ASARQTESLESLLSKSQEHEQRLAALQGRL R Q T S K S 0 0 0 0 0 1 2 0 0 0 3 1 0 0 0 3 1 0 0 0 0 0 11 0 1233.6452 Q07065 Q07065 430 440 CKAP4 Cytoskeleton-associated protein 4 yes yes 2 0.018957 86.189 By MS/MS 5 0 1 1 711920 711920 0 11353 1300 12046 28605 22876 22876 1 7140.2 0 QTESTSFLEK AGYYCGFKATAAGVKQTESTSFLEKKVKKK AAGVKQTESTSFLEKKVKKKFDWTFEQTVE K Q T E K K 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 2 2 0 0 0 0 0 10 0 1168.5612 P60900 P60900 172 181 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.044911 82.749 By MS/MS 8 0 1 1 0 0 0 11354 1099 12047 28606 22877 22877 1 0 0 QTESTSFLEKK AGYYCGFKATAAGVKQTESTSFLEKKVKKK AGVKQTESTSFLEKKVKKKFDWTFEQTVET K Q T K K V 0 0 0 0 0 1 2 0 0 0 1 2 0 1 0 2 2 0 0 0 0 0 11 1 1296.6561 P60900 P60900 172 182 PSMA6 Proteasome subunit alpha type-6 yes yes 2;3 3.4122E-05 166.86 By MS/MS 8 0 3 3 1697400 1697400 0 11355 1099 12048;12049 28607;28608;28609 22878;22879;22880 22880 2 21430 0 QTEVLLQPNPNAR SKAECTKIWTEKIMKQTEVLLQPNPNARIE MKQTEVLLQPNPNARIEEFVYEKLDRKAPS K Q T A R I 1 1 2 0 0 2 1 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 13 0 1478.7841 Q9Y371 Q9Y371 62 74 SH3GLB1 Endophilin-B1 yes yes 2 0.00066482 132.17 By MS/MS 7 0 1 1 1005800 1005800 0 11356 2857 12050 28610 22881 22881 1 15789 0 QTFENQVNR AHNNELEPTPGNTLRQTFENQVNRILNDAR PGNTLRQTFENQVNRILNDARDKTGSSAQK R Q T N R I 0 1 2 0 0 2 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 9 0 1134.5418 P24928 P24928 735 743 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.00010805 160.63 By MS/MS 2.5 0.5 1 1 2 637660 637660 0 11357 717 12051 28611;28612 22882 22882 1 164830 0 QTFIDNTDSIVK FWKGYKQRKEYMHRRQTFIDNTDSIVKIQS HRRQTFIDNTDSIVKIQSWFRMATARKSYL R Q T V K I 0 0 1 2 0 1 0 0 0 2 0 1 0 1 0 1 2 0 0 1 0 0 12 0 1379.6933 Q13576 Q13576 715 726 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.00032833 160.77 By MS/MS 3 0 1 1 219710 219710 0 11358 1399 12052 28613 22883 22883 1 4020.1 0 QTFSPFGQIMEIR YCGGIASGLTDQLMRQTFSPFGQIMEIRVF MRQTFSPFGQIMEIRVFPEKGYSFVRFSTH R Q T I R V 0 1 0 0 0 2 1 1 0 2 0 0 1 2 1 1 1 0 0 0 0 0 13 0 1552.7708 Q01085;P31483 Q01085 223 235 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 yes no 2 0.00011531 171.49 By MS/MS 7 0 2 2 590690 590690 0 11359 1266 12053;12054 28614;28615 22884;22885 22884 758 1 9272.7 0 QTFTHNPLLQPGK RMRNQLELAARGPLRQTFTHNPLLQPGKDN LRQTFTHNPLLQPGKDNPPNIPSSSSKPKS R Q T G K D 0 0 1 0 0 2 0 1 1 0 2 1 0 1 2 0 2 0 0 0 0 0 13 0 1479.7834 Q15070 Q15070 399 411 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.014893 94.767 By MS/MS 7 0 1 1 0 0 0 11360 1487 12055 28616 22886 22886 0 0 0 QTGEGVGPQEYTLLK IYSPKDGQPCMDHDRQTGEGVGPQEYTLLK QTGEGVGPQEYTLLKLKVLEPYPSKLSGLK R Q T L K L 0 0 0 0 0 2 2 3 0 0 2 1 0 0 1 0 2 0 1 1 0 0 15 0 1618.8203 Q9P2J5 Q9P2J5 254 268 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 1.7327E-12 252.37 By MS/MS 3.88 1.9 1 1 2 1 1 1 1 8 6214400 6214400 0 11361 2684 12056;12057 28617;28618;28619;28620;28621;28622;28623;28624 22887;22888;22889;22890;22891 22888 4 231910 0 QTGKEVAGLVTLK SYFLKAAAGIEKGARQTGKEVAGLVTLKHV ARQTGKEVAGLVTLKHVYEIARIKAQDEAF R Q T L K H 1 0 0 0 0 1 1 2 0 0 2 2 0 0 0 0 2 0 0 2 0 0 13 1 1342.782 Q9Y3B7 Q9Y3B7 103 115 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0013782 155.88 By MS/MS 9 0 2 2 1275800 1275800 0 11362 2866 12058;12059 28625;28626 22892;22893 22893 1 25107 0 QTIDNSQGAYQEAFDISKK YFRYLAEVACGDDRKQTIDNSQGAYQEAFD NSQGAYQEAFDISKKEMQPTHPIRLGLALN K Q T K K E 2 0 1 2 0 3 1 1 0 2 0 2 0 1 0 2 1 0 1 0 0 0 19 1 2142.0229 P27348 P27348 140 158 YWHAQ 14-3-3 protein theta yes yes 3 8.1085E-05 130.64 By MS/MS 8 0 1 1 2355200 2355200 0 11363 739 12060 28627 22894 22894 1 29735 0 QTKPEFDQVLQGTAASTK FSTVLTVFPILRHLKQTKPEFDQVLQGTAA PEFDQVLQGTAASTKNKLPGLITSMETIGA K Q T T K N 2 0 0 1 0 3 1 1 0 0 1 2 0 1 1 1 3 0 0 1 0 0 18 1 1947.9902 Q9UPT5 Q9UPT5 441 458 EXOC7 Exocyst complex component 7 yes yes 2;3 6.3635E-33 330.04 By MS/MS 5 0 2 2 1983300 1983300 0 11364 2801 12061;12062 28628;28629 22895;22896 22896 1 19891 0 QTLAIYDR QGNVYGQITVRMHTRQTLAIYDRFGRLMYG TVRMHTRQTLAIYDRFGRLMYGQEDVPKDV R Q T D R F 1 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 978.51345 Q9BRJ2 Q9BRJ2 220 227 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.0022955 140.35 By MS/MS 8 0 1 1 4308100 4308100 0 11365 2295 12063 28630 22897 22897 1 54389 0 QTLDALNYLHDNK LERPLTESQIQVVCKQTLDALNYLHDNKII CKQTLDALNYLHDNKIIHRDLKAGNILFTL K Q T N K I 1 0 2 2 0 1 0 0 1 0 3 1 0 0 0 0 1 0 1 0 0 0 13 0 1543.7631 Q9H2G2 Q9H2G2 138 150 SLK STE20-like serine/threonine-protein kinase yes yes 4 0.023357 63.76 By MS/MS 5 0 1 1 7597800 7597800 0 11366 2429 12064 28631 22898 22898 1 76202 0 QTLEKVEK LLNAYAEKGDIDHVKQTLEKVEKSELHLMD GDIDHVKQTLEKVEKSELHLMDRDLLQIIF K Q T E K S 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 1 0 0 8 1 973.54441 P42704 P42704 288 295 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.033993 116.37 By MS/MS 3 0 1 1 0 0 0 11367 886 12065 28632 22899 22899 0 0 0 QTLENERGELANEVK LEQTKRVKANLEKAKQTLENERGELANEVK QTLENERGELANEVKVLLQGKGDSEHKRKK K Q T V K V 1 1 2 0 0 1 4 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 15 1 1728.8642 P35579 P35579 1220 1234 MYH9 Myosin-9 yes yes 2 2.9398E-06 205.31 By MS/MS 2 0 2 2 386850 386850 0 11368 824 12066;12067 28633;28634 22900;22901 22900 1 130850 0 QTLGPGTEQQGSHLNPEQLR MAKHTATHLLNWALRQTLGPGTEQQGSHLN GTEQQGSHLNPEQLRLDVTTQTPLTPEQLR R Q T L R L 0 1 1 0 0 4 2 3 1 0 3 0 0 0 2 1 2 0 0 0 0 0 20 0 2189.0825 Q5JTZ9 Q5JTZ9 644 663 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 3 1.8328E-05 148.36 By MS/MS 4.5 0.5 1 1 2 5926700 5926700 0 11369 1613 12068 28635;28636 22902 22902 1 468540 0 QTLLDMIAR RDQVVRYGCIRDHLRQTLLDMIARERKGEV IRDHLRQTLLDMIARERKGEVVDRGAIRNA R Q T A R E 1 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1059.5747 Q13618 Q13618 163 171 CUL3 Cullin-3 yes yes 2 0.0020347 120.87 By MS/MS 4.5 0.5 1 1 2 313490 313490 0 11370 1404 12069 28637;28638 22903;22904 22903 2 15559 0 QTLQEDLLR RLNLVEAFVEDAELRQTLQEDLLRRFPDLN EDAELRQTLQEDLLRRFPDLNRLAKKFQRQ R Q T L R R 0 1 0 1 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1114.5982 P43246 P43246 374 382 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0014058 128.86 By MS/MS 4 0 1 1 1428200 1428200 0 11371 894 12070 28639 22905 22905 1 134400 0 QTLQSEQPLQVAR TGLAPPALWDLAADKQTLQSEQPLQVARCT DKQTLQSEQPLQVARCTKIINADSEDPKYI K Q T A R C 1 1 0 0 0 4 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1496.7947 P35998 P35998 85 97 PSMC2 26S protease regulatory subunit 7 yes yes 2 8.4415E-05 178.67 By MS/MS 6.5 0.5 1 1 2 2134600 2134600 0 11372 831 12071 28640;28641 22906 22906 1 23125 0 QTNPSAMEVEEDDPVPEIR IRESIESEIRRERERQTNPSAMEVEEDDPV SAMEVEEDDPVPEIRRDHFEEAMRFARRSV R Q T I R R 1 1 1 2 0 1 4 0 0 1 0 0 1 0 3 1 1 0 0 2 0 0 19 0 2154.9739 P55072 P55072 714 732 VCP Transitional endoplasmic reticulum ATPase yes yes 2 9.6335E-45 317.91 By MS/MS 4 0 1 1 1614400 1614400 0 11373 1054 12072 28642 22907 22907 1 151920 0 QTNPSAMEVEEDDPVPEIRR IRESIESEIRRERERQTNPSAMEVEEDDPV AMEVEEDDPVPEIRRDHFEEAMRFARRSVS R Q T R R D 1 2 1 2 0 1 4 0 0 1 0 0 1 0 3 1 1 0 0 2 0 0 20 1 2311.075 P55072 P55072 714 733 VCP Transitional endoplasmic reticulum ATPase yes yes 3 3.1916E-05 115.58 By MS/MS 4.5 0.5 1 1 2 2434200 2434200 0 11374 1054 12073 28643;28644 22908 22908 1 210870 0 QTQAASASQGSASAAEVLLR VYFAVEDEALLSIYKQTQAASASQGSASAA SASQGSASAAEVLLRTATANGFQMVTSGVQ K Q T L R T 6 1 0 0 0 3 1 1 0 0 2 0 0 0 0 4 1 0 0 1 0 0 20 0 1944.9865 Q969V3 Q969V3 158 177 NCLN Nicalin yes yes 2 1.9069E-46 387.43 By MS/MS 6 0 1 1 3671500 3671500 0 11375 2096 12074 28645 22909 22909 1 25239 0 QTRPILKEQSSSSFSQGQSS SSREVFTSSSSSSSRQTRPILKEQSSSSFS LKEQSSSSFSQGQSS_______________ R Q T S S - 0 1 0 0 0 4 1 1 0 1 1 1 0 1 1 7 1 0 0 0 0 0 20 2 2181.0662 CON__P08779;P08779 CON__P08779 454 473 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.0020699 104.16 By matching By MS/MS 5 3.35 2 1 1 1 2 3 2816000 348680 2467300 + 11376 47 12075 28646;28647;28648;28649;28650 22910;22911;22912;22913;22914 22912 5 69340 3439700 QTSGGPVDASSEYQQELER QKLFVDKIREYKSKRQTSGGPVDASSEYQQ GPVDASSEYQQELERELFKLKQMFGNADMN R Q T E R E 1 1 0 1 0 3 3 2 0 0 1 0 0 0 1 3 1 0 1 1 0 0 19 0 2079.9345 P18859 P18859 55 73 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2 5.2874E-45 327.1 By MS/MS 10 0 2 2 1975900 1975900 0 11377 657 12076;12077 28651;28652 22915;22916 22915 1 106490 0 QTSLDAVAQAVVDR ANQEIAAMIDTEFAKQTSLDAVAQAVVDRV KQTSLDAVAQAVVDRVKRIHSDTFASGGER K Q T D R V 3 1 0 2 0 2 0 0 0 0 1 0 0 0 0 1 1 0 0 3 0 0 14 0 1471.7631 Q15750 Q15750 320 333 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 0.00038579 164.13 By MS/MS 6 0 1 1 1588700 1588700 0 11378 1528 12078 28653 22917 22917 1 10921 0 QTSSTPSSLALTSASR PSPNIPIELIPHINKQTSSTPSSLALTSAS TSSTPSSLALTSASRIRERSESLDPDSSMD K Q T S R I 2 1 0 0 0 1 0 0 0 0 2 0 0 0 1 6 3 0 0 0 0 0 16 0 1592.8006 Q5SW79 Q5SW79 859 874 CEP170 Centrosomal protein of 170 kDa yes yes 2 3.8495E-11 238.88 By MS/MS 2.5 0.5 1 1 2 2358800 2358800 0 11379 1623 12079 28654;28655 22918;22919 22918 2 519800 0 QTTPESDFNLQALR PMHGGTLLEDVVGGRQTTPESDFNLQALRS RQTTPESDFNLQALRSRYEALKKSLSKKRE R Q T L R S 1 1 1 1 0 2 1 0 0 0 2 0 0 1 1 1 2 0 0 0 0 0 14 0 1618.7951 Q7Z4H7 Q7Z4H7 821 834 HAUS6 HAUS augmin-like complex subunit 6 yes yes 2 2.8689E-11 238.92 By MS/MS 4.33 0.471 2 1 3 2212200 2212200 0 11380 1792 12080;12081 28656;28657;28658 22920;22921 22920 1 191200 0 QTTVSNSQQAYQEAFEISK DYFRYLSEVASGDNKQTTVSNSQQAYQEAF SNSQQAYQEAFEISKKEMQPTHPIRLGLAL K Q T S K K 2 0 1 0 0 4 2 0 0 1 0 1 0 1 0 3 2 0 1 1 0 0 19 0 2158.0178 P31946 P31946 141 159 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 1.7843E-11 232.78 By MS/MS 8 0 1 1 788180 788180 0 11381 793 12082 28659 22922 22922 1 9950.7 0 QTVAVGVIK SDYPPLGRFAVRDMRQTVAVGVIKAVDKKA AVRDMRQTVAVGVIKAVDKKAAGAGKVTKS R Q T I K A 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 9 0 913.55967 Q5VTE0;P68104;Q05639 Q5VTE0 431 439 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.0025533 114.28 By MS/MS By matching 5.6 3.01 1 1 1 1 1 1 1 1 2 9 1 72533000 72476000 57568 11382 1209 12083 28660;28661;28662;28663;28664;28665;28666;28667;28668;28669 22923;22924;22925 22923 3 2134900 73703 QTVEADVNGLRR ADDFRTKYEHELALRQTVEADVNGLRRVLD ALRQTVEADVNGLRRVLDELTLARTDLEMQ R Q T R R V 1 2 1 1 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 2 0 0 12 1 1356.711 CON__P08779;P08779 CON__P08779 214 225 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.0043583 114.86 By matching By MS/MS 3 0.816 1 1 1 1 2 1449500 940180 509320 + 11383 47 12084 28670;28671;28672 22926 22926 1 88477 168180 QTVFLLEKPFSVK VVFSTGPQSTKTHWKQTVFLLEKPFSVKAG WKQTVFLLEKPFSVKAGEALKGKVTVHKNK K Q T V K A 0 0 0 0 0 1 1 0 0 0 2 2 0 2 1 1 1 0 0 2 0 0 13 1 1534.8759 O60678 O60678 482 494 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.01285 110.64 By MS/MS 5 0 1 1 0 0 0 11384 269 12085 28673 22927 22927 0 0 0 QTVLESIR DIIREQIRLKASEHRQTVLESIRTAGTLFG LKASEHRQTVLESIRTAGTLFGEGFRAFVT R Q T I R T 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 8 0 944.5291 Q9NVI7;Q5T9A4 Q5T9A4 220 227 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 1;2 0.0043208 105.14 By MS/MS 5.2 0.4 4 1 5 27348000 27348000 0 11385 2598;1638 12086;12087 28674;28675;28676;28677;28678 22928;22929;22930;22931;22932 22929 1 274290 0 QTYFLPVIGLVDAEK SQRKGKCAVIKTSTRQTYFLPVIGLVDAEK QTYFLPVIGLVDAEKLKPGDLVGVNKDSYL R Q T E K L 1 0 0 1 0 1 1 1 0 1 2 1 0 1 1 0 1 0 1 2 0 0 15 0 1691.9134 P17980 P17980 130 144 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 0.00087926 147.33 By MS/MS 6 0 3 3 3267200 3267200 0 11386 647 12088 28679;28680;28681 22933;22934;22935;22936 22933 4 22460 0 QTYSTEPNNLK MVVRNCSSFLIKRNKQTYSTEPNNLKARNS KRNKQTYSTEPNNLKARNSFRYNGLIHRKT K Q T L K A 0 0 2 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 1 0 0 0 11 0 1293.6201 P46779 P46779 23 33 RPL28 60S ribosomal protein L28 yes yes 2 9.102E-05 159.34 By MS/MS 9.33 0.471 2 1 3 3276600 3276600 0 11387 917 12089;12090 28682;28683;28684 22937;22938;22939 22937 2 72441 0 QVAASTAQLLVACK VQGHASQEKLISSAKQVAASTAQLLVACKV KQVAASTAQLLVACKVKADQDSEAMKRLQA K Q V C K V 4 0 0 0 1 2 0 0 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1458.7864 Q9Y490;Q9Y4G6 Q9Y490 2430 2443 TLN1;TLN2 Talin-1;Talin-2 no no 2 2.1421E-07 215.08 By MS/MS 2.75 0.829 2 1 1 4 2735900 2735900 0 11388 2888;2895 12091;12092 28685;28686;28687;28688 22940;22941;22942 22941 2 675460 0 QVAEAYEVLSDAK DKNPENKEEAERKFKQVAEAYEVLSDAKKR FKQVAEAYEVLSDAKKRDIYDKYGKEGLNG K Q V A K K 3 0 0 1 0 1 2 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 13 0 1421.7038 O75190;Q8WWF6 O75190 48 60 DNAJB6;DNAJB3 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 3 yes no 2 4.3714E-24 272.65 By MS/MS 7.33 0.471 2 1 3 4223000 4223000 0 11389 305 12093;12094 28689;28690;28691 22943;22944;22945 22944 2 58242 0 QVAEQFLNMR RMALIGLGVSHPVLKQVAEQFLNMRGGLGL HPVLKQVAEQFLNMRGGLGLSGAKANYRGG K Q V M R G 1 1 1 0 0 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 10 0 1234.6128 P22695 P22695 232 241 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.00028319 140.83 By MS/MS 6.67 0.471 1 2 3 2160900 2160900 0 11390 696 12095;12096 28692;28693;28694 22946;22947 22946 346 1 25067 0 QVAGTMKLELAQYR SVSRVGSAAQTRAMKQVAGTMKLELAQYRE KQVAGTMKLELAQYREVAAFAQFGSDLDAA K Q V Y R E 2 1 0 0 0 2 1 1 0 0 2 1 1 0 0 0 1 0 1 1 0 0 14 1 1606.8501 P25705 P25705 428 441 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0065764 89.356 By MS/MS By matching 6 0 2 1 1 0 0 0 11391 723 12097 28695;28696 22948 22948 360 0 0 0 QVAQASHSYR QDFHPRLLGLTGSTKQVAQASHSYRVYYNA TGSTKQVAQASHSYRVYYNAGPKDEDQDYI K Q V Y R V 2 1 0 0 0 2 0 0 1 0 0 0 0 0 0 2 0 0 1 1 0 0 10 0 1145.5578 O43819 O43819 197 206 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.0002246 145.46 By MS/MS 8 0 2 2 1364500 1364500 0 11392 238 12098;12099 28697;28698 22949;22950 22949 1 17227 0 QVAQEQFFLMCTR FIIDLLLHCHSKTVRQVAQEQFFLMCTRCC VRQVAQEQFFLMCTRCCMGHRPLLFFITLL R Q V T R C 1 1 0 0 1 3 1 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 13 0 1656.7752 Q93008 Q93008 1330 1342 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 3.2336E-08 221.6 By MS/MS 2 0 3 3 621380 621380 0 11393 2085 12100;12101;12102 28699;28700;28701 22951;22952;22953 22951 1009 2 210180 0 QVAQQEAER HLTFGKEFTEAVEAKQVAQQEAERARFVVE EAVEAKQVAQQEAERARFVVEKAEQQKKAA K Q V E R A 2 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1057.5152 P35232 P35232 187 195 PHB Prohibitin yes yes 2 0.00010704 160.82 By MS/MS By MS/MS 8.5 0.764 4 1 1 4 2 6682700 6647800 34924 11394 814 12103;12104 28702;28703;28704;28705;28706;28707 22954;22955;22956;22957 22955 3 110070 47129 QVAQQEAERAR HLTFGKEFTEAVEAKQVAQQEAERARFVVE VEAKQVAQQEAERARFVVEKAEQQKKAAII K Q V A R F 3 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 11 1 1284.6535 P35232 P35232 187 197 PHB Prohibitin yes yes 2 0.00024241 161.27 By MS/MS By MS/MS 8.6 0.8 3 1 1 4 1 8859700 8770700 88972 11395 814 12105;12106 28708;28709;28710;28711;28712 22958;22959;22960 22959 2 110730 120060 QVAQQEAQR ELSFSREYTAAVEAKQVAQQEAQRAQFLVE AAVEAKQVAQQEAQRAQFLVEKAKQEQRQK K Q V Q R A 2 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1056.5312 Q99623 Q99623 201 209 PHB2 Prohibitin-2 yes yes 2 1.7693E-05 177.7 By MS/MS By MS/MS 8 1.07 3 2 1 1 5 2 49577000 49437000 140190 11396 2254 12107;12108 28713;28714;28715;28716;28717;28718;28719 22961;22962;22963;22964;22965;22966 22963 5 749040 236260 QVATALQNLQTK RQGKGDSPEARALAKQVATALQNLQTKTNR LAKQVATALQNLQTKTNRAVANSRPAKAAV K Q V T K T 2 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 12 0 1313.7303 P18206 P18206 465 476 VCL Vinculin yes yes 2 5.544E-06 190.26 By MS/MS By matching 3.6 0.8 3 1 1 4 1 2141500 2020300 121160 11397 653 12109;12110 28720;28721;28722;28723;28724 22967;22968 22967 1 60269 15421 QVCEIIESPLFLK TTGGPPDPSDIHVHKQVCEIIESPLFLKLN HKQVCEIIESPLFLKLNPMTKHTDLPVSVF K Q V L K L 0 0 0 0 1 1 2 0 0 2 2 1 0 1 1 1 0 0 0 1 0 0 13 0 1574.8378 Q7L5N1 Q7L5N1 141 153 COPS6 COP9 signalosome complex subunit 6 yes yes 2 5.6466E-17 255.52 By MS/MS 7.5 0.5 1 1 2 328900 328900 0 11398 1766 12111 28725;28726 22969;22970 22969 2 4748.6 0 QVCPLDNR HAFHFHCISRWLKTRQVCPLDNREWEFQKY SRWLKTRQVCPLDNREWEFQKYGH______ R Q V N R E 0 1 1 1 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1000.476 P62877 P62877 92 99 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 0.013109 120.49 By MS/MS 10 0 1 1 922480 922480 0 11399 1180 12112 28727 22971 22971 1 49718 0 QVCPVCK CWPCLHQWLETRPNRQVCPVCKAGISRDKV WLETRPNRQVCPVCKAGISRDKVIPLYGRG R Q V C K A 0 0 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 0 0 7 0 889.41499 Q96GF1 Q96GF1 74 80 RNF185 E3 ubiquitin-protein ligase RNF185 yes yes 2 0.02338 109.7 By MS/MS 9 0 1 1 1257100 1257100 0 11400 2161 12113 28728 22972 22972 1 24741 0 QVDCALSLIR DWYQTRAEEIEHYARQVDCALSLIRLGMER EHYARQVDCALSLIRLGMERNIPGLLVLCD R Q V I R L 1 1 0 1 1 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1173.6176 A2RRP1 A2RRP1 859 868 NBAS Neuroblastoma-amplified sequence yes yes 2 0.032553 80.755 By MS/MS 1.5 0.5 1 1 2 389940 389940 0 11401 11 12114 28729;28730 22973;22974 22973 2 118730 0 QVDLIDLVR AAAQLLESSVQNLFKQVDLIDLVRWKILKD VQNLFKQVDLIDLVRWKILKDKHIPQFLQE K Q V V R W 0 1 0 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1069.6132 Q9UKN8 Q9UKN8 536 544 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 0.0012288 131.11 By MS/MS 4.5 0.5 1 1 2 1022800 1022800 0 11402 2762 12115 28731;28732 22975 22975 1 75308 0 QVDLLSAEQMR NLEPLLENYIGDLRRQVDLLSAEQMRQNAE DLRRQVDLLSAEQMRQNAEVRSMQDVVEDY R Q V M R Q 1 1 0 1 0 2 1 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 11 0 1288.6445 CON__Q7Z794;Q7Z794 CON__Q7Z794 225 235 KRT77 Keratin, type II cytoskeletal 1b yes no 2 0.013015 101.3 By MS/MS 2.5 0.5 1 1 2 309840 0 309840 + 11403 72 12116 28733;28734 22976 22976 49 1 0 210090 QVDVSYIAK PTLDVKIAFCQGFDKQVDVSYIAKHYNMSK CQGFDKQVDVSYIAKHYNMSKSKVDNQFYS K Q V A K H 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 2 0 0 9 0 1021.5444 P53779 P53779 27 35 MAPK10 Mitogen-activated protein kinase 10 yes yes 2 0.0044905 110.12 By MS/MS 6 0 1 1 17856000 17856000 0 11404 1036 12117 28735 22977 22977 1 122740 0 QVEDDIQQLLK LLKTYGQSTYSRQIKQVEDDIQQLLKKINE RQIKQVEDDIQQLLKKINELTGIKESDTGL K Q V L K K 0 0 0 2 0 3 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1327.6983 P35998 P35998 47 57 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.9948E-06 180.67 By MS/MS 6.75 0.829 2 1 1 4 3776200 3776200 0 11405 831 12118;12119 28736;28737;28738;28739 22978;22979;22980;22981;22982 22979 3 35781 0 QVEDGEVFDFR IMSSFVNTMTSLSVKQVEDGEVFDFRGMRL LSVKQVEDGEVFDFRGMRLDWFRLQAYTSV K Q V F R G 0 1 0 2 0 1 2 1 0 0 0 0 0 2 0 0 0 0 0 2 0 0 11 0 1339.6044 Q9Y2A7 Q9Y2A7 474 484 NCKAP1 Nck-associated protein 1 yes yes 2 1.019E-06 190.57 By MS/MS 4 0 1 1 1930400 1930400 0 11406 2824 12120 28740 22983 22983 1 181660 0 QVEEIFNLK PVKEDWNVRITKLRKQVEEIFNLKFAQALG ITKLRKQVEEIFNLKFAQALGLTEAVKVPY K Q V L K F 0 0 1 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1118.5972 P78347 P78347 574 582 GTF2I General transcription factor II-I yes yes 2 0.014148 93.162 By MS/MS 3.5 0.5 1 1 2 1287500 1287500 0 11407 1221 12121 28741;28742 22984;22985 22984 2 23557 0 QVEEKPQR RIKRSAKRPSAAPIKQVEEKPQRAQNISSN PSAAPIKQVEEKPQRAQNISSNANMLRKGP K Q V Q R A 0 1 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 1 1012.5302 Q14008 Q14008 1434 1441 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.036205 101.6 By MS/MS 2 0 1 1 0 0 0 11408 1417 12122 28743 22986 22986 0 0 0 QVEELFERK FNFEKWNARITDLRKQVEELFERKYAQAIK ITDLRKQVEELFERKYAQAIKAKGPVTIPY K Q V R K Y 0 1 0 0 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1176.6139 P78347 P78347 364 372 GTF2I General transcription factor II-I yes yes 2 0.0098697 109.48 By MS/MS 3.5 0.5 1 1 2 0 0 0 11409 1221 12123 28744;28745 22987 22987 0 0 0 QVEEQSAAANEEVLFPFCR KNHEAGTSGCGIDAKQVEEQSAAANEEVLF QSAAANEEVLFPFCREPSYFEIPTKEFQQP K Q V C R E 3 1 1 0 1 2 4 0 0 0 1 0 0 2 1 1 0 0 0 2 0 0 19 0 2223.0266 Q5SW79 Q5SW79 218 236 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.00013449 129.29 By MS/MS 2 0 1 1 71031 71031 0 11410 1623 12124 28746 22988 22988 1 24025 0 QVELELQQIEQK KEALKTGVDLRHYSKQVELELQQIEQKSIR YSKQVELELQQIEQKSIRDYIQESENIASL K Q V Q K S 0 0 0 0 0 4 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1483.7882 Q8N1B4 Q8N1B4 86 97 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 6.797E-70 361.66 By MS/MS 4.33 0.471 2 1 3 2171800 2171800 0 11411 1902 12125;12126 28747;28748;28749 22989;22990 22989 1 181310 0 QVENAGAIGPSR PVSRRTELSIDISSKQVENAGAIGPSRFGL SSKQVENAGAIGPSRFGLKRAEVLGHKTPE K Q V S R F 2 1 1 0 0 1 1 2 0 1 0 0 0 0 1 1 0 0 0 1 0 0 12 0 1197.6102 Q9UHD8 Q9UHD8 118 129 SEPT9 Septin-9 yes yes 2 0.00012672 155.26 By MS/MS 5 0 1 1 579630 579630 0 11412 2730 12127 28750 22991 22991 1 5813.4 0 QVEQLEK IEDLEELDPDFIMAKQVEQLEKEKKELQER DPDFIMAKQVEQLEKEKKELQERLKNQEKK K Q V E K E 0 0 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 872.46035 Q14152 Q14152 673 679 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0075749 145.04 By MS/MS 2.5 1.12 1 1 1 1 4 2120400 2120400 0 11413 1422 12128 28751;28752;28753;28754 22992 22992 1 395300 0 QVEQLEKEK IEDLEELDPDFIMAKQVEQLEKEKKELQER DFIMAKQVEQLEKEKKELQERLKNQEKKID K Q V E K K 0 0 0 0 0 2 3 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1129.5979 Q14152 Q14152 673 681 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 8.1504E-10 221.94 By MS/MS 3.38 0.857 1 4 2 1 8 2886500 2886500 0 11414 1422 12129;12130 28755;28756;28757;28758;28759;28760;28761;28762 22993;22994;22995;22996 22994 2 88635 0 QVEQLEKEKK IEDLEELDPDFIMAKQVEQLEKEKKELQER FIMAKQVEQLEKEKKELQERLKNQEKKIDY K Q V K K E 0 0 0 0 0 2 3 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 10 2 1257.6929 Q14152 Q14152 673 682 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 1.0012E-26 266.99 By MS/MS 3.27 0.854 3 6 5 1 15 26017000 26017000 0 11415 1422 12131;12132 28763;28764;28765;28766;28767;28768;28769;28770;28771;28772;28773;28774;28775;28776;28777 22997;22998;22999;23000;23001;23002;23003;23004 22999 3 857590 0 QVEVELLSR ATLEHFYLTSGKQPKQVEVELLSRQSGLSG SGKQPKQVEVELLSRQSGLSGRQVERWFRR K Q V S R Q 0 1 0 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 9 0 1071.5924 Q96G23 Q96G23 97 105 CERS2 Ceramide synthase 2 yes yes 2 6.5498E-06 179.81 By MS/MS By matching 4.5 2.57 1 1 1 3 5 1 6303100 6246900 56187 11416 2156 12133;12134 28778;28779;28780;28781;28782;28783 23005;23006;23007;23008;23009 23005 4 565840 101190 QVEVINFGDCLVR EKGAVAMAETLKTLRQVEVINFGDCLVRSK LRQVEVINFGDCLVRSKGAVAIADAIRGGL R Q V V R S 0 1 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 13 0 1547.7766 P46060 P46060 265 277 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 4.8995E-17 257.54 By MS/MS 5 1.1 2 2 1 5 9369500 9369500 0 11417 908 12135;12136 28784;28785;28786;28787;28788 23010;23011;23012;23013;23014 23010 4 160650 0 QVFEQDASGDER VTTDTQRERQKGLPRQVFEQDASGDERSGP LPRQVFEQDASGDERSGPEDSNDSRRGSGS R Q V E R S 1 1 0 2 0 2 2 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 12 0 1379.5953 Q96HP0 Q96HP0 152 163 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 2.2748E-12 227.36 By MS/MS 2 0 1 1 297250 297250 0 11418 2166 12137 28789 23015 23015 1 100540 0 QVGDIFSNPETVLAK DIFEDAGILCQRVNKQVGDIFSNPETVLAK QVGDIFSNPETVLAKLIQNVFEIKLQSFVK K Q V A K L 1 0 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 0 0 2 0 0 15 0 1616.841 O00471 O00471 260 274 EXOC5 Exocyst complex component 5 yes yes 2 0.00041584 167.22 By MS/MS 5 0 2 2 2214200 2214200 0 11419 108 12138;12139 28790;28791 23016;23017 23016 1 22208 0 QVGVGYVDSIQR IGVVGVKMSAVDGQRQVGVGYVDSIQRKLG GQRQVGVGYVDSIQRKLGLCEFPDNDQFSN R Q V Q R K 0 1 0 1 0 2 0 2 0 1 0 0 0 0 0 1 0 0 1 3 0 0 12 0 1319.6834 P43246 P43246 160 171 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.00037977 138.76 By MS/MS 4 0.816 1 1 1 3 3142000 3142000 0 11420 894 12140 28792;28793;28794 23018;23019 23019 2 272060 0 QVHPDTGISSK SRKESYSVYVYKVLKQVHPDTGISSKAMGI KVLKQVHPDTGISSKAMGIMNSFVNDIFER K Q V S K A 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 0 11 0 1167.5884 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q96A08 Q99880 48 58 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B type 1-A yes no 2;3 1.3684E-05 169.76 By MS/MS 10 0 2 2 3151300 3151300 0 11421 279 12141 28795;28796 23020;23021 23020 2 169840 0 QVIGTGSFFPK GTVWHKDCFTCSNCKQVIGTGSFFPKGEDF SNCKQVIGTGSFFPKGEDFYCVTCHETKFA K Q V P K G 0 0 0 0 0 1 0 2 0 1 0 1 0 2 1 1 1 0 0 1 0 0 11 0 1179.6288 Q13642 Q13642 134 144 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.0050144 103.88 By MS/MS 8.33 0.471 2 1 3 983780 983780 0 11422 1407 12142;12143 28797;28798;28799 23022;23023;23024 23023 2 13505 0 QVIINLINQK GFQRHFDSQVIIYGKQVIINLINQKGSEKP IIYGKQVIINLINQKGSEKPLEQTFATMVS K Q V Q K G 0 0 2 0 0 2 0 0 0 3 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1181.7132 Q9NTJ5 Q9NTJ5 302 311 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 2.9196E-05 161.9 By MS/MS 4.18 2.21 2 2 1 2 2 2 11 3807400 3807400 0 11423 2576 12144;12145 28800;28801;28802;28803;28804;28805;28806;28807;28808;28809;28810 23025;23026;23027;23028;23029;23030;23031;23032 23025 3 170170 0 QVILLHTELER RHVLDNSGEWSVTKRQVILLHTELERSLEY VTKRQVILLHTELERSLEYLPLRFGVLTGL R Q V E R S 0 1 0 0 0 1 2 0 1 1 3 0 0 0 0 0 1 0 0 1 0 0 11 0 1349.7667 Q8WVC6 Q8WVC6 188 198 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 4.6199E-05 140.78 By MS/MS 9 0 1 1 0 0 0 11424 2024 12146 28811 23033 23033 0 0 0 QVISQLPR YQRCLDSAYDPRICRQVISQLPRCHRNVFR YDPRICRQVISQLPRCHRNVFRYLMAFLRE R Q V P R C 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 8 0 939.55016 Q01968 Q01968 823 830 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.039514 86.472 By MS/MS 4.5 0.5 1 1 2 5646500 5646500 0 11425 1273 12147 28812;28813 23034 23034 1 509540 0 QVITLLNELK GAVALGHPLGCTGARQVITLLNELKRRGKR CTGARQVITLLNELKRRGKRAYGVVSMCIG R Q V L K R 0 0 1 0 0 1 1 0 0 1 3 1 0 0 0 0 1 0 0 1 0 0 10 0 1169.702 P09110 P09110 386 395 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 0.00030524 139.98 By MS/MS 7 0 1 1 273080 273080 0 11426 532 12148 28814 23035 23035 1 4286.8 0 QVIVVASGK MSRGLPKQKPIEGVKQVIVVASGKGGVGKS PIEGVKQVIVVASGKGGVGKSTTAVNLALA K Q V G K G 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 3 0 0 9 0 899.54402 Q8TB37 Q8TB37 68 76 NUBPL Iron-sulfur protein NUBPL yes yes 2 0.045874 77.732 By MS/MS 9 0 1 1 254310 254310 0 11427 1980 12149 28815 23036 23036 1 5004.9 0 QVKPYVEEGLHPQIIIR DGTTSVTLLAAEFLKQVKPYVEEGLHPQII KPYVEEGLHPQIIIRAFRTATQLAVNKIKE K Q V I R A 0 1 0 0 0 2 2 1 1 3 1 1 0 0 2 0 0 0 1 2 0 0 17 1 2018.1313 Q99832 Q99832 107 123 CCT7 T-complex protein 1 subunit eta yes yes 2;3;4 0.00023693 157.37 By MS/MS 6.2 0.4 4 1 5 65623000 65623000 0 11428 2270 12150;12151 28816;28817;28818;28819;28820 23037;23038;23039;23040 23039 2 457920 0 QVLALELPEALCR RRCVGLSAPQLGVPRQVLALELPEALCREC PRQVLALELPEALCRECPPRQRALRQMEPF R Q V C R E 2 1 0 0 1 1 2 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 13 0 1510.8177 Q9HBH1 Q9HBH1 121 133 PDF Peptide deformylase, mitochondrial yes yes 2 0.00043435 138.42 By MS/MS 9 0 1 1 189290 189290 0 11429 2504 12152 28821 23041 23041 1 3725.2 0 QVLALQSQLADTK EQQEEEEEARKNLEKQVLALQSQLADTKKK EKQVLALQSQLADTKKKVDDDLGTIESLEE K Q V T K K 2 0 0 1 0 3 0 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 13 0 1413.7827 P35580 P35580 1365 1377 MYH10 Myosin-10 yes yes 2 2.2707E-11 229 By MS/MS By matching 2.33 0.471 2 1 2 1 1015400 957620 57741 11430 825 12153 28822;28823;28824 23042 23042 1 281060 81657 QVLDNLTMEK QNLRQGVDADINGLRQVLDNLTMEKSDLEM INGLRQVLDNLTMEKSDLEMQYETLQEELM R Q V E K S 0 0 1 1 0 1 1 0 0 0 2 1 1 0 0 0 1 0 0 1 0 0 10 0 1189.6013 P35527;CON__P35527 P35527 262 271 KRT9 Keratin, type I cytoskeletal 9 yes no 2 7.454E-12 209.73 By MS/MS By MS/MS 3.95 2.06 2 3 3 4 4 2 1 9 10 29415000 17483000 11932000 + 11431 822 12154;12155;12156 28825;28826;28827;28828;28829;28830;28831;28832;28833;28834;28835;28836;28837;28838;28839;28840;28841;28842;28843 23043;23044;23045;23046;23047;23048;23049;23050;23051;23052;23053;23054;23055;23056;23057;23058 23049 406 15 1745900 8221600 QVLFTPATQAAR TSPLDLKLGHNNWLRQVLFTPATQAARQAA WLRQVLFTPATQAARQAACTIVEALATIPS R Q V A R Q 3 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 12 0 1301.7092 Q5T4S7 Q5T4S7 4131 4142 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.0013831 118.03 By MS/MS 2.25 0.829 1 1 2 4 858010 858010 0 11432 1633 12157;12158 28844;28845;28846;28847 23059;23060 23059 1 127010 0 QVLILGLR LVEEVERRVLGSSERQVLILGLRRCCLWTE VLGSSERQVLILGLRRCCLWTELKALHDQS R Q V L R R 0 1 0 0 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 8 0 910.59639 O94927 O94927 340 347 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.0032791 133.47 By MS/MS 5 0 1 1 359420 359420 0 11433 377 12159 28848 23061 23061 1 3604.8 0 QVLIRPCSK DALKSINNAEKRGKRQVLIRPCSKVIVRFL EKRGKRQVLIRPCSKVIVRFLTVMMKHGYI R Q V S K V 0 1 0 0 1 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 9 1 1099.6172 P62244 P62244 24 32 RPS15A 40S ribosomal protein S15a yes yes 2 0.0029489 143.73 By MS/MS By matching 10 0 3 2 1 4091300 4091300 0 11434 1144 12160;12161 28849;28850;28851 23062;23063 23062 1 220500 0 QVLLEIFSK VFALWESGDMSDQHRQVLLEIFSKNYRVRR MSDQHRQVLLEIFSKNYRVRRNMIQSRLTQ R Q V S K N 0 0 0 0 0 1 1 0 0 1 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1075.6277 Q9NVU0 Q9NVU0 651 659 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.002535 114.51 By MS/MS 5 0 1 1 645890 645890 0 11435 2603 12162 28852 23064 23064 1 6478 0 QVLLGDQIPK GVIRLAAIAESGVERQVLLGDQIPKFAVAT SGVERQVLLGDQIPKFAVATLPPA______ R Q V P K F 0 0 0 1 0 2 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1109.6445 P28072 P28072 221 230 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.0011359 125.71 By MS/MS By MS/MS 9.25 0.433 3 1 3 1 10457000 10411000 46331 11436 750 12163;12164 28853;28854;28855;28856 23065;23066;23067 23066 2 212640 105650 QVLLSAAEAAEVILR DMAILGITESFQVKRQVLLSAAEAAEVILR QVLLSAAEAAEVILRVDNIIKAAPRKRVPD R Q V L R V 4 1 0 0 0 1 2 0 0 1 3 0 0 0 0 1 0 0 0 2 0 0 15 0 1581.909 P78371 P78371 502 516 CCT2 T-complex protein 1 subunit beta yes yes 2 5.7712E-11 234.04 By MS/MS 6 0 1 1 205460 205460 0 11437 1222 12165 28857 23068;23069 23069 2 1412.4 0 QVLNADSVEQSFVGLK DLMLRFLGEKAAAKRQVLNADSVEQSFVGL VLNADSVEQSFVGLKQLISCRNWRAAVDLC R Q V L K Q 1 0 1 1 0 2 1 1 0 0 2 1 0 1 0 2 0 0 0 3 0 0 16 0 1732.8996 Q8WVT3 Q8WVT3 370 385 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.0002553 174.94 By MS/MS 4.5 0.5 1 1 2 743780 743780 0 11438 2029 12166 28858;28859 23070 23070 1 63296 0 QVLNQDLTFQHIK HGSGDSGQGLRMWIKQVLNQDLTFQHIKII IKQVLNQDLTFQHIKIIYPTAPPRSYTPMK K Q V I K I 0 0 1 1 0 3 0 0 1 1 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1582.8467 Q5VWZ2 Q5VWZ2 43 55 LYPLAL1 Lysophospholipase-like protein 1 yes yes 2 0.0007981 139.15 By MS/MS 8 0 1 1 0 0 0 11439 1655 12167 28860 23071 23071 0 0 0 QVLPDPEVLEAVGDR GLSESETGPMEEVERQVLPDPEVLEAVGDR QVLPDPEVLEAVGDRQDGLREQLQAPVPPD R Q V D R Q 1 1 0 2 0 1 2 1 0 0 2 0 0 0 2 0 0 0 0 3 0 0 15 0 1635.8468 Q96AQ6 Q96AQ6 231 245 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.00044677 134.56 By MS/MS 4 0 1 1 185140 185140 0 11440 2108 12168 28861 23072 23072 1 17423 0 QVLVAPGNAGTACSEK EHTLAWKLAQSHHVKQVLVAPGNAGTACSE VLVAPGNAGTACSEKISNTAISISDHTALA K Q V E K I 3 0 1 0 1 1 1 2 0 0 1 1 0 0 1 1 1 0 0 2 0 0 16 0 1600.7879 P22102 P22102 29 44 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00039862 133.04 By MS/MS 4 0 1 1 1181000 1181000 0 11441 688 12169 28862 23073 23073 1 111140 0 QVLVFNCDEGIDVK GKTESVKALGGLLGRQVLVFNCDEGIDVKS RQVLVFNCDEGIDVKSMGRIFVGLVKCGAW R Q V V K S 0 0 1 2 1 1 1 1 0 1 1 1 0 1 0 0 0 0 0 3 0 0 14 0 1634.7974 Q8NCM8 Q8NCM8 1709 1722 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00040787 136.27 By MS/MS 1 0 1 1 186090 186090 0 11442 1952 12170 28863 23074 23074 1 44841 0 QVNITVQK LDLVKPEPVYKLTQRQVNITVQKKVSQWWE VYKLTQRQVNITVQKKVSQWWERLTKQEKR R Q V Q K K 0 0 1 0 0 2 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 928.53418 Q9P035 Q9P035 77 84 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0049312 125.81 By MS/MS 1.5 0.5 1 1 2 2335600 2335600 0 11443 2661 12171 28864;28865 23075;23076 23076 2 643440 0 QVPGGGGGGGSGGGGGSGGGGSGGGR ______________________________ GGGGGSGGGGSGGGRGAGGEENKENERPSA K Q V G R G 0 1 0 0 0 1 0 19 0 0 0 0 0 0 1 3 0 0 0 1 0 0 26 0 1842.7953 Q9UHB9 Q9UHB9 6 31 SRP68 Signal recognition particle subunit SRP68 yes yes 2;3 1.2104E-08 163.15 By MS/MS 5 0 2 2 1404600 1404600 0 11444 2728 12172 28866;28867 23077;23078 23077 2 14088 0 QVQADFITLGLSEEK LLVPNGALKKSLTAKQVQADFITLGLSEEK QVQADFITLGLSEEKATYFSEKWKQNAPTL K Q V E K A 1 0 0 1 0 2 2 1 0 1 2 1 0 1 0 1 1 0 0 1 0 0 15 0 1676.8621 Q86VX2 Q86VX2 91 105 COMMD7 COMM domain-containing protein 7 yes yes 2 4.5456E-11 237.07 By MS/MS 9 0 1 1 98732 98732 0 11445 1834 12173 28868 23079 23079 1 1943.1 0 QVQHEESTEGEADHSGYAGELGFR NVDFDAPLGYKEPERQVQHEESTEGEADHS GEADHSGYAGELGFRAFSGSGNRLDGKKKG R Q V F R A 2 1 0 1 0 2 5 4 2 0 1 0 0 1 0 2 1 0 1 1 0 0 24 0 2632.1426 Q92890 Q92890 203 226 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 3 0.00010694 91.337 By MS/MS 7 0 1 1 677870 677870 0 11446 2075 12174 28869 23080 23080 1 10641 0 QVQHILASASPSGR KTQPPEDISCIAWNRQVQHILASASPSGRA RQVQHILASASPSGRATVWDLRKNEPIIKV R Q V G R A 2 1 0 0 0 2 0 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 14 0 1449.7688 O94979 O94979 179 192 SEC31A Protein transport protein Sec31A yes yes 2 0.00084105 135.1 By MS/MS 3 0 1 1 0 0 0 11447 382 12175 28870 23081 23081 0 0 0 QVQIDGLVVLK GKGKGKGGSGDSAVKQVQIDGLVVLKIIKH SAVKQVQIDGLVVLKIIKHYQEEGQGTEVV K Q V L K I 0 0 0 1 0 2 0 1 0 1 2 1 0 0 0 0 0 0 0 3 0 0 11 0 1210.7285 O15372 O15372 38 48 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 1.4064E-05 169.41 By MS/MS 7 0 3 3 1711400 1711400 0 11448 186 12176;12177 28871;28872;28873 23082;23083;23084 23082 2 26866 0 QVQNLVNK KELEKEREKILEYKRQVQNLVNKSKKIVQL KILEYKRQVQNLVNKSKKIVQLKPRNPDYR R Q V N K S 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 941.52943 P15924 P15924 434 441 DSP Desmoplakin yes yes 2 0.00072959 170.17 By MS/MS By MS/MS 2.38 0.992 2 2 3 1 5 3 3298600 1971800 1326800 11449 628 12178 28874;28875;28876;28877;28878;28879;28880;28881 23085;23086;23087;23088 23085 4 382280 375350 QVQPEGPYR DSIHSLAAYYIDCIRQVQPEGPYRVAGYSY YIDCIRQVQPEGPYRVAGYSYGACVAFEMC R Q V Y R V 0 1 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 0 1 1 0 0 9 0 1072.5302 P49327 P49327 2295 2303 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0012716 130.56 By MS/MS 2.5 1.12 1 1 1 1 4 21930000 21930000 0 11450 946 12179 28882;28883;28884;28885 23089;23090;23091 23089 3 4375300 0 QVRPVTEK GVKEKFTMVQVWPVRQVRPVTEKLPANHPL VQVWPVRQVRPVTEKLPANHPLLTGQRVLD R Q V E K L 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 2 0 0 8 1 955.54508 P38606 P38606 213 220 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 0.0063895 150.05 By MS/MS 5 0 1 1 736850 736850 0 11451 849 12180 28886 23092 23092 1 7390.3 0 QVSDDLTER FDAGELITQRELVSRQVSDDLTERAATFGL RELVSRQVSDDLTERAATFGLILDDVSLTH R Q V E R A 0 1 0 2 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1061.4989 P35232 P35232 149 157 PHB Prohibitin yes yes 2 0.021746 88.177 By MS/MS By matching 8.75 0.829 2 1 1 3 1 51206000 51189000 17196 11452 814 12181 28887;28888;28889;28890 23093;23094 23093 2 679570 23205 QVSDLISVLR KTGTAYTFFTPNNIKQVSDLISVLREANQA PNNIKQVSDLISVLREANQAINPKLLQLVE K Q V L R E 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 10 0 1128.6503 P17844 P17844 452 461 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.019322 93.556 By MS/MS 5 0 2 2 1637400 1637400 0 11453 646 12182;12183 28891;28892 23095;23096 23096 1 16422 0 QVSDVQKR ATLQKSTKEVRSSIRQVSDVQKRVQVDVKM EVRSSIRQVSDVQKRVQVDVKMAILQIMKE R Q V K R V 0 1 0 1 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 2 0 0 8 1 958.51959 Q13263 Q13263 283 290 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 0.0011 157.33 By MS/MS By matching 4.93 1.16 1 5 4 2 2 13 1 9565300 9544300 20984 11454 1367 12184;12185 28893;28894;28895;28896;28897;28898;28899;28900;28901;28902;28903;28904;28905;28906 23097;23098;23099;23100 23100 2 702470 44710 QVSGLTVDTEER ILNKLTPQMFNQLMKQVSGLTVDTEERLKG LMKQVSGLTVDTEERLKGVIDLVFEKAIDE K Q V E R L 0 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1332.6521 O43432 O43432 776 787 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00031113 143.24 By MS/MS 3 0.816 1 1 1 3 1805500 1805500 0 11455 210 12186 28907;28908;28909 23101;23102 23101 2 359380 0 QVSKPLANR VGAFPMAKLLYLGIRQVSKPLANRIKEAAR LYLGIRQVSKPLANRIKEAARRSEFFKTYI R Q V N R I 1 1 1 0 0 1 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 1 1011.5825 Q9H6K4 Q9H6K4 18 26 OPA3 Optic atrophy 3 protein yes yes 2 0.0095454 122.18 By MS/MS 9 0 1 1 519880 519880 0 11456 2457 12187 28910 23103 23103 1 10231 0 QVTAAQLHLR QKVYSSHTGYPGGFRQVTAAQLHLRDPVAI PGGFRQVTAAQLHLRDPVAIVKLAIYGMLP R Q V L R D 2 1 0 0 0 2 0 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1135.6462 Q9BYD1 Q9BYD1 89 98 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0022417 119.75 By MS/MS 9 0 1 1 0 0 0 11457 2368 12188 28911 23104 23104 0 0 0 QVTAAQLHLRDPVAIVK QKVYSSHTGYPGGFRQVTAAQLHLRDPVAI TAAQLHLRDPVAIVKLAIYGMLPKNLHRRT R Q V V K L 3 1 0 1 0 2 0 0 1 1 2 1 0 0 1 0 1 0 0 3 0 0 17 1 1858.0789 Q9BYD1 Q9BYD1 89 105 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 3 0.00022572 129.05 By MS/MS 9 0 1 1 0 0 0 11458 2368 12189 28912 23105 23105 0 0 0 QVTDAETKPK EMDDTEHPEDGIFIRQVTDAETKPKSPCT_ GIFIRQVTDAETKPKSPCT___________ R Q V P K S 1 0 0 1 0 1 1 0 0 0 0 2 0 0 1 0 2 0 0 1 0 0 10 1 1115.5823 O43684 O43684 315 324 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0020458 134.84 By MS/MS 7 0 2 2 1242800 1242800 0 11459 228 12190;12191 28913;28914 23106;23107 23107 1 19510 0 QVTQEEGQQLAR PMILIGNKADLDHQRQVTQEEGQQLARQLK HQRQVTQEEGQQLARQLKVTYMEASAKIRM R Q V A R Q 1 1 0 0 0 4 2 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 12 0 1385.6899 P62070 P62070 136 147 RRAS2 Ras-related protein R-Ras2 yes yes 2 1.8091E-06 197.73 By MS/MS 9 0 1 1 505870 505870 0 11460 1137 12192 28915 23108 23108 1 9955.7 0 QVTQLAIDTEER ILNKLTPQMFQQLMKQVTQLAIDTEERLKG LMKQVTQLAIDTEERLKGVIDLIFEKAISE K Q V E R L 1 1 0 1 0 2 2 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1401.71 Q04637 Q04637 782 793 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.7302E-56 341.35 By MS/MS 2.64 1.23 2 4 2 2 1 11 52781000 52781000 0 11461 1291 12193;12194 28916;28917;28918;28919;28920;28921;28922;28923;28924;28925;28926 23109;23110;23111;23112;23113;23114;23115;23116;23117;23118 23112 7 14253000 0 QVTQLAIDTEERLK ILNKLTPQMFQQLMKQVTQLAIDTEERLKG KQVTQLAIDTEERLKGVIDLIFEKAISEPN K Q V L K G 1 1 0 1 0 2 2 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 14 1 1642.889 Q04637 Q04637 782 795 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.002402 158.06 By MS/MS 2.75 0.829 2 1 1 4 548610 548610 0 11462 1291 12195;12196 28927;28928;28929;28930 23119;23120 23120 1 185560 0 QVVAVTGDGTNDGPALK TLVKGIIDSTVSDQRQVVAVTGDGTNDGPA VAVTGDGTNDGPALKKADVGFAMGIAGTDV R Q V L K K 2 0 1 2 0 1 0 3 0 0 1 1 0 0 1 0 2 0 0 3 0 0 17 0 1640.837 P20020;Q16720;P23634;Q01814 P20020 790 806 ATP2B1;ATP2B3;ATP2B4;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 2 yes no 2 2.3958E-24 283.05 By MS/MS 2 0.816 1 1 1 3 1393100 1393100 0 11463 667 12197 28931;28932;28933 23121;23122 23122 2 239650 0 QVVESAYEVIK LGTDKDKEQWKEVHKQVVESAYEVIKLKGY EVHKQVVESAYEVIKLKGYTSWAIGLSVAD K Q V I K L 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 1 3 0 0 11 0 1263.6711 P00338 P00338 233 243 LDHA L-lactate dehydrogenase A chain yes yes 2 0.00014919 164.66 By MS/MS 8 0 1 1 2747300 2747300 0 11464 440 12198 28934 23123 23123 1 34684 0 QVVILSQDSFYR IVQLLGQNEVDYRQKQVVILSQDSFYRVLT RQKQVVILSQDSFYRVLTSEQKAKALKGQF K Q V Y R V 0 1 0 1 0 2 0 0 0 1 1 0 0 1 0 2 0 0 1 2 0 0 12 0 1453.7565 Q9BZX2 Q9BZX2 55 66 UCK2 Uridine-cytidine kinase 2 yes yes 2 1.5948E-08 208.84 By MS/MS 8 0 1 1 796780 796780 0 11465 2385 12199 28935 23124 23124 1 10059 0 QVVNIPSFIVR HARVLIRQRHIRVRKQVVNIPSFIVRLDSQ RVRKQVVNIPSFIVRLDSQKHIDFSLRSPY K Q V V R L 0 1 1 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 0 3 0 0 11 0 1270.7398 P46781 P46781 140 150 RPS9 40S ribosomal protein S9 yes yes 2 0.00088939 123.79 By MS/MS 9 0.816 2 2 2 6 7766500 7766500 0 11466 918 12200;12201 28936;28937;28938;28939;28940;28941 23125;23126;23127;23128 23125 3 155000 0 QVVQGLLSETYLEAHR SVTGIFLPILRTGFRQVVQGLLSETYLEAH VVQGLLSETYLEAHRIVKMNKSEDDESGAG R Q V H R I 1 1 0 0 0 2 2 1 1 0 3 0 0 0 0 1 1 0 1 2 0 0 16 0 1841.9636 P33993 P33993 287 302 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 0.00013704 190.85 By MS/MS 4.86 0.833 3 2 2 7 1792700 1792700 0 11467 808 12202;12203 28942;28943;28944;28945;28946;28947;28948 23129;23130;23131 23130 1 32517 0 QVVQTPNTVLSTPFR TPLHESDFSGVTPQRQVVQTPNTVLSTPFR QVVQTPNTVLSTPFRTPSNGAEGLTPRSGT R Q V F R T 0 1 1 0 0 2 0 0 0 0 1 0 0 1 2 1 3 0 0 3 0 0 15 0 1685.9101 Q99459 Q99459 400 414 CDC5L Cell division cycle 5-like protein yes yes 2 7.8307E-11 228.93 By MS/MS 4.5 0.5 2 2 4 1207900 1207900 0 11468 2245 12204;12205 28949;28950;28951;28952 23132;23133 23132 1 93134 0 QVVTVVFER TKDNITNNTAAATVRQVVTVVFERMVAEDE AAATVRQVVTVVFERMVAEDERHRDIIEQP R Q V E R M 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 4 0 0 9 0 1075.6026 Q7Z3U7 Q7Z3U7 171 179 MON2 Protein MON2 homolog yes yes 2 0.00032566 152.06 By MS/MS 3 0.816 1 1 1 3 1199800 1199800 0 11469 1787 12206 28953;28954;28955 23134 23134 1 227340 0 QYAEQELEQVR LRELREGAECELSRRQYAEQELEQVRMALK LSRRQYAEQELEQVRMALKKAEKEFELRSS R Q Y V R M 1 1 0 0 0 3 3 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1391.6681 Q9P246 Q9P246 319 329 STIM2 Stromal interaction molecule 2 yes yes 2 0.0095652 91.855 By MS/MS 4 0 1 1 1114900 1114900 0 11470 2676 12207 28956 23135 23135 1 104920 0 QYAGLDHELAFSR QSFVFQREEIAQLARQYAGLDHELAFSRLI ARQYAGLDHELAFSRLIVELRRLHPGHVLP R Q Y S R L 2 1 0 1 0 1 1 1 1 0 2 0 0 1 0 1 0 0 1 0 0 0 13 0 1505.7263 Q99720 Q99720 48 60 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 2 0.00011916 171.49 By MS/MS 8 0 2 2 2595300 2595300 0 11471 2262 12208;12209 28957;28958 23136;23137 23136 1 32765 0 QYAGTGALKTDFTR IYKNAWADNANACAKQYAGTGALKTDFTRT KQYAGTGALKTDFTRTGKRTHLGLIMDGWN K Q Y T R T 2 1 0 1 0 1 0 2 0 0 1 1 0 1 0 0 3 0 1 0 0 0 14 1 1527.7682 Q9NTJ5 Q9NTJ5 448 461 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0022084 160.56 By MS/MS 1 0 1 1 0 0 0 11472 2576 12210 28959 23138;23139 23138 0 0 0 QYAGYDYSQQGR QQSYDYGGSGGPYSKQYAGYDYSQQGRFVP YSKQYAGYDYSQQGRFVPPDMMQPQQPYTG K Q Y G R F 1 1 0 1 0 3 0 2 0 0 0 0 0 0 0 1 0 0 3 0 0 0 12 0 1434.6164 Q969M3 Q969M3 38 49 YIPF5 Protein YIPF5 yes yes 2 0.00033456 141.71 By MS/MS 2 0.816 1 1 1 3 903420 903420 0 11473 2092 12211 28960;28961;28962 23140;23141 23141 2 222330 0 QYASYEFVQR DALLNQLKSFPARLRQYASYEFVQRLLKGY PARLRQYASYEFVQRLLKGYMKINMLVIEL R Q Y Q R L 1 1 0 0 0 2 1 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 10 0 1289.6041 Q14204 Q14204 1379 1388 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.7344E-05 169.65 By MS/MS 1.8 0.748 2 2 1 5 2566000 2566000 0 11474 1433 12212;12213 28963;28964;28965;28966;28967 23142;23143;23144 23142 2 693220 0 QYDGIFYEFR TLAPQMCSSFATGPRQYDGIFYEFRSYYLK ATGPRQYDGIFYEFRSYYLKPSKMNEFLEN R Q Y F R S 0 1 0 1 0 1 1 1 0 1 0 0 0 2 0 0 0 0 2 0 0 0 10 0 1336.6088 Q9UFN0 Q9UFN0 31 40 NIPSNAP3A Protein NipSnap homolog 3A yes yes 2 0.00013993 151.22 By MS/MS 8 0 1 1 165940 165940 0 11475 2715 12214 28968 23145;23146 23145 2 2094.9 0 QYDQEIENLEK QIFRRFEQEMMSKKRQYDQEIENLEKQQKQ SKKRQYDQEIENLEKQQKQTIERLEQEHTN R Q Y E K Q 0 0 1 1 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 11 0 1407.6518 Q9H2G2 Q9H2G2 873 883 SLK STE20-like serine/threonine-protein kinase yes yes 2 3.8644E-13 233.84 By MS/MS 2 0 1 1 953600 953600 0 11476 2429 12215 28969 23147 23147 1 322550 0 QYDQFGDDKSQAAR IGTAYAVLSNPEKRKQYDQFGDDKSQAARH KQYDQFGDDKSQAARHGHGHGDFHRGFEAD K Q Y A R H 2 1 0 3 0 3 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 14 1 1627.7227 Q9NXW2 Q9NXW2 169 182 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0012241 171.49 By MS/MS 7 0 1 1 359310 359310 0 11477 2630 12216 28970 23148 23148 1 5640.5 0 QYEKSENDLK GRLKELREQLKELTKQYEKSENDLKALQSV KELTKQYEKSENDLKALQSVGQIVGEVLKQ K Q Y L K A 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1252.5935 P62333 P62333 39 48 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0012453 143.37 By MS/MS 7 0 1 1 0 0 0 11478 1159 12217 28971 23149 23149 0 0 0 QYENHIFVGSK PTIKCKPDKLPLFKRQYENHIFVGSKTADP LFKRQYENHIFVGSKTADPCCYGHTQFHLL R Q Y S K T 0 0 1 0 0 1 1 1 1 1 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1320.6463 Q9NP92 Q9NP92 277 287 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 2 0.0013605 114.4 By MS/MS 6 0 1 1 1339800 1339800 0 11479 2528 12218 28972 23150 23150 1 9210 0 QYEQQTYQVIPEVIK DMHTGDPKQDLAYERQYEQQTYQVIPEVIK QYEQQTYQVIPEVIKNFIQYFHKTVSDLID R Q Y I K N 0 0 0 0 0 4 2 0 0 2 0 1 0 0 1 0 1 0 2 2 0 0 15 0 1864.9571 Q9Y262 Q9Y262 39 53 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 2.5974E-17 331.92 By MS/MS 6.57 1.4 2 2 1 1 1 7 16608000 16608000 0 11480 2814 12219;12220 28973;28974;28975;28976;28977;28978;28979 23151;23152;23153;23154;23155;23156 23151 5 161020 0 QYFHQLEK SMSDSEVQAKEEHLRQYFHQLEKMNVKIPE AKEEHLRQYFHQLEKMNVKIPENIYRGIRN R Q Y E K M 0 0 0 0 0 2 1 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 8 0 1091.54 P42704 P42704 606 613 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.010677 122.18 By MS/MS 4 0.816 1 1 1 3 0 0 0 11481 886 12221 28980;28981;28982 23157 23157 0 0 0 QYGDESTLAFQQAR LGRQTDFGMYDYFTRQYGDESTLAFQQARY RQYGDESTLAFQQARYNFIRSMAAYSLLLF R Q Y A R Y 2 1 0 1 0 3 1 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 14 0 1612.7481 P42356;A4QPH2 P42356 1923 1936 PI4KA;PI4KAP2 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2 yes no 2 3.136E-05 193.62 By MS/MS 2.5 0.5 1 1 2 654740 654740 0 11482 880 12222 28983;28984 23158 23158 1 166250 0 QYGITGENVR AGAAEMREQFYHSCKQYGITGENVRGELLA YHSCKQYGITGENVRGELLALVKDLPSQLA K Q Y V R G 0 1 1 0 0 1 1 2 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1135.5622 Q96JB5 Q96JB5 167 176 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.028965 91.867 By MS/MS 5 0 1 1 0 0 0 11483 2177 12223 28985 23159 23159 1 0 0 QYGNEVFLAK IDEVSSLLRTSIMSKQYGNEVFLAKLIAQA SIMSKQYGNEVFLAKLIAQACVSIFPDSGH K Q Y A K L 1 0 1 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 0 0 10 0 1167.5924 P50990 P50990 172 181 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00085997 134.05 By MS/MS 5.64 2.5 1 1 1 1 2 2 2 1 11 129050000 129050000 0 11484 984 12224;12225 28986;28987;28988;28989;28990;28991;28992;28993;28994;28995;28996 23160;23161;23162;23163;23164 23164 4 1120100 0 QYGPNVPEPILQK AVDNPKPHSELEMLRQYGPNVPEPILQKLV LRQYGPNVPEPILQKLVAAFGELRSLADQG R Q Y Q K L 0 0 1 0 0 2 1 1 0 1 1 1 0 0 3 0 0 0 1 1 0 0 13 0 1481.7878 A3KMH1 A3KMH1 942 954 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 6.4019E-07 203.02 By MS/MS 3 0.816 1 1 1 3 1448900 1448900 0 11485 14 12226 28997;28998;28999 23165;23166 23165 2 308340 0 QYGSEGR FVEVKDPEDKVILARQYGSEGRFTFTSHTP EDKVILARQYGSEGRFTFTSHTPGEHQICL R Q Y G R F 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 1 0 0 0 7 0 795.35113 Q7Z7H5;Q9BVK6 Q9BVK6 101 107 TMED4;TMED9 Transmembrane emp24 domain-containing protein 4;Transmembrane emp24 domain-containing protein 9 no no 2 0.026551 107.32 By MS/MS 9 0 1 1 951070 951070 0 11486 2334;1806 12227 29000 23167 23167 1 18717 0 QYINAIK ERHGEKVEECQRFAKQYINAIKDYELQLVT EECQRFAKQYINAIKDYELQLVTYKAQLEP K Q Y I K D 1 0 1 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 7 0 848.4756 Q15149 Q15149 1411 1417 PLEC Plectin yes yes 2 0.0091833 138.48 By MS/MS 2.5 0.5 1 1 2 630990 630990 0 11487 1492 12228 29001;29002 23168 23168 1 173460 0 QYKPLSLNR RIPKYGFNEGHSFRRQYKPLSLNRLQYLID GHSFRRQYKPLSLNRLQYLIDLGRVDPSQP R Q Y N R L 0 1 1 0 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 0 0 0 9 1 1117.6244 Q9P015 Q9P015 92 100 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 3 0.022439 88.177 By MS/MS 8 0 1 1 1297500 1297500 0 11488 2659 12229 29003 23169 23169 1 16381 0 QYLFSLYECR GAEILEVLHSLPAVRQYLFSLYECRYSVFF LPAVRQYLFSLYECRYSVFFQSLAVVEQEM R Q Y C R Y 0 1 0 0 1 1 1 0 0 0 2 0 0 1 0 1 0 0 2 0 0 0 10 0 1377.6387 Q15008 Q15008 258 267 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00019086 147.75 By MS/MS 6.67 0.471 1 2 3 972210 972210 0 11489 1471 12230;12231 29004;29005;29006 23170;23171 23170 1 15262 0 QYLLCPGSSGVENTELVK LHYYGLRDSRSEHERQYLLCPGSSGVENTE LCPGSSGVENTELVKSPSEYLMMLMPPSQE R Q Y V K S 0 0 1 0 1 1 2 2 0 0 3 1 0 0 1 2 1 0 1 2 0 0 18 0 1992.9826 Q9NVU0 Q9NVU0 223 240 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 8.3294E-08 222.56 By MS/MS 4.5 0.5 1 1 2 2109400 2109400 0 11490 2603 12232 29007;29008 23172 23172 1 43569 0 QYPISLVLAPTR ALRAMKENGRYGRRKQYPISLVLAPTRELA RRKQYPISLVLAPTRELAVQIYEEARKFSY K Q Y T R E 1 1 0 0 0 1 0 0 0 1 2 0 0 0 2 1 1 0 1 1 0 0 12 0 1356.7765 O00571;O15523 O00571 265 276 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.0013164 119.27 By MS/MS 5.17 1.07 2 2 1 1 6 8681000 8681000 0 11491 116 12233;12234 29009;29010;29011;29012;29013;29014 23173;23174;23175;23176 23173 3 101640 0 QYPYNNLYLER WVGDVYPVYQPVGPKQYPYNNLYLERGGDP VGPKQYPYNNLYLERGGDPSKEPERVVHYE K Q Y E R G 0 1 2 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 3 0 0 0 11 0 1471.7096 O95169 O95169 160 170 NDUFB8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes yes 2 0.00022579 158.79 By MS/MS 9.33 0.471 2 1 3 2299400 2299400 0 11492 390 12235;12236 29015;29016;29017 23177;23178 23178 1 50622 0 QYQIDAAIVR VEEQASTTERVFQDRQYQIDAAIVRIMKMR VFQDRQYQIDAAIVRIMKMRKTLSHNLLVS R Q Y V R I 2 1 0 1 0 2 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 10 0 1175.6299 Q13620;Q13619 Q13620 847 856 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.00086677 142.43 By MS/MS 4 0 1 1 2613700 2613700 0 11493 1405 12237 29018 23179 23179 1 245970 0 QYQLLFTQGSGENK SPFMNKFFPASFPNRQYQLLFTQGSGENKE RQYQLLFTQGSGENKEEIINYEFDTKDLVC R Q Y N K E 0 0 1 0 0 3 1 2 0 0 2 1 0 1 0 1 1 0 1 0 0 0 14 0 1611.7893 Q8TCT9 Q8TCT9 137 150 HM13 Minor histocompatibility antigen H13 yes yes 2 1.9843E-56 356.68 By MS/MS 1.5 0.5 1 1 2 446660 446660 0 11494 1993 12238 29019;29020 23180;23181 23180 2 131280 0 QYTSPEEIDAQLQAEK MPKGGRKGGHKGRARQYTSPEEIDAQLQAE YTSPEEIDAQLQAEKQKAREEEEQKEGGDG R Q Y E K Q 2 0 0 1 0 3 3 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 16 0 1848.8741 Q13442 Q13442 16 31 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 6.4662E-24 290.1 By MS/MS 8 0 1 1 2079600 2079600 0 11495 1386 12239 29021 23182 23182 1 26255 0 QYTSPEEIDAQLQAEKQK MPKGGRKGGHKGRARQYTSPEEIDAQLQAE SPEEIDAQLQAEKQKAREEEEQKEGGDGAA R Q Y Q K A 2 0 0 1 0 4 3 0 0 1 1 2 0 0 1 1 1 0 1 0 0 0 18 1 2105.0277 Q13442 Q13442 16 33 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.047391 59.15 By MS/MS 8 0 1 1 1539800 1539800 0 11496 1386 12240 29022 23183 23183 1 19440 0 QYTYGLVSCGLDR SNLADWLGSLDPRFRQYTYGLVSCGLDRSL FRQYTYGLVSCGLDRSLLHRVSEQQLLEDC R Q Y D R S 0 1 0 1 1 1 0 2 0 0 2 0 0 0 0 1 1 0 2 1 0 0 13 0 1530.7137 Q6SZW1 Q6SZW1 500 512 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.00038453 155.47 By MS/MS 5 0 1 1 874100 874100 0 11497 1726 12241 29023 23184 23184 1 8766.8 0 RAAAAADLANR KYLGFGTPSNLGKGRRAAAAADLANRSGES GKGRRAAAAADLANRSGESNTHQDIEEKDR R R A N R S 6 2 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 1 1098.5894 O76031 O76031 452 462 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.0034359 121.5 By MS/MS By matching 5.33 0.471 2 1 2 1 4488700 4460200 28579 11498 360 12242 29024;29025;29026 23185 23185 1 42377 24000 RAAATQPDAK RQINLSNIRAGNLARRAAATQPDAKDTPDE GNLARRAAATQPDAKDTPDEPWAFPAREFL R R A A K D 4 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 10 1 1027.5411 Q7KZF4 Q7KZF4 62 71 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0025843 128.35 By MS/MS By matching 3.67 0.471 1 2 1 2 1040300 839660 200600 11499 1755 12243 29027;29028;29029 23186 23186 1 79017 56732 RAAFKCWCQALDDIFR ALHSLGSLLIFAEKKRAAFKCWCQALDDIF AAFKCWCQALDDIFRKPDVLHTWKEFGPSL K R A F R K 3 2 0 2 2 1 0 0 0 1 1 1 0 2 0 0 0 1 0 0 0 0 16 2 2055.9771 Q96N23 Q96N23 1935 1950 CFAP54 Cilia- and flagella-associated protein 54 yes yes 2 0.051671 96.113 By MS/MS 6 0 1 1 3352900 3352900 0 11500 2199 12244 29030 23187 23187 1 23048 0 RAASAATAAPTATPAAQESGTIPK GRPREALSTNECKARRAASAATAAPTATPA PTATPAAQESGTIPKKRQEVMKWNGWGYND R R A P K K 9 1 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 24 1 2238.1604 O00116 O00116 62 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 5.1074E-08 131.41 By MS/MS 5 0 1 1 2781700 2781700 0 11501 80 12245 29031 23188 23188 1 27899 0 RAAVAASSSS RFRHGFREGTTPKPKRAAVAASSSS_____ TPKPKRAAVAASSSS_______________ K R A S S - 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 1 905.45666 P61927 P61927 88 97 RPL37 60S ribosomal protein L37 yes yes 2 0.006732 112.41 By MS/MS 10 0 1 1 736380 736380 0 11502 1132 12246 29032 23189 23189 1 39688 0 RACYGVLR AESLRYKLLGGLAVRRACYGVLRFIMESGA LGGLAVRRACYGVLRFIMESGAKGCEVVVS R R A L R F 1 2 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 1 993.51782 P23396 P23396 117 124 RPS3 40S ribosomal protein S3 yes yes 2 0.014621 128.86 By MS/MS By matching 8.33 0.471 2 1 2 1 33205000 33173000 32589 11503 703 12247 29033;29034;29035 23190 23190 1 426910 43978 RADDDRFPR DRGPWRNMDDDRLSRRADDDRFPRRGDDSR DDRLSRRADDDRFPRRGDDSRPGPWRPLVK R R A P R R 1 3 0 3 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 9 2 1146.553 Q14152 Q14152 1151 1159 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.032292 101.9 By MS/MS By matching 5.2 2.09 3 2 1 1 1 1 1 9 1 34327000 34214000 113250 11504 1422 12248 29036;29037;29038;29039;29040;29041;29042;29043;29044;29045 23191;23192 23191 2 712850 14415 RADDNATIR RDGASRRGESMQPNRRADDNATIRVTNLSE SMQPNRRADDNATIRVTNLSEDTRETDLQE R R A I R V 2 2 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 1 1030.5156 O75821 O75821 234 242 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.0011142 152.06 By MS/MS By MS/MS 7.62 1.32 2 2 2 1 1 6 2 47518000 47491000 27819 11505 348 12249 29046;29047;29048;29049;29050;29051;29052;29053 23193;23194;23195;23196;23197;23198;23199 23195 7 747850 28506 RADPAELR ______________________________ AKVALTKRADPAELRTIFLKYASIEKNGEF K R A L R T 2 2 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 1 926.49338 Q9UJS0 Q9UJS0 11 18 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.007441 157.33 By MS/MS 6 0.816 1 1 1 3 41657000 41657000 0 11506 2748 12250 29054;29055;29056 23200 23200 1 420490 0 RAEAEKQLQQAQAAGAEQEVEK PPQLKSGELAKRSERRAEAEKQLQQAQAAG LQQAQAAGAEQEVEKFTKRLVKVTKQHNDE R R A E K F 6 1 0 0 0 5 5 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 22 2 2411.2041 P39748 P39748 104 125 FEN1 Flap endonuclease 1 yes yes 3 0.0031182 85.518 By MS/MS 7 0 1 1 773210 773210 0 11507 856 12251 29057 23201 23201 1 12138 0 RAEAGDAVVAKPGVWAR ______________________________ EAGDAVVAKPGVWARLGSWARALLRDYAEA R R A A R L 5 2 0 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 3 0 0 17 2 1751.9431 Q9BSF4 Q9BSF4 14 30 C19orf52 Uncharacterized protein C19orf52 yes yes 3 0.0012296 112.12 By MS/MS 8 0 1 1 764730 764730 0 11508 2305 12252 29058 23202 23202 1 9654.6 0 RAEATAASTSR APADRQQYLRQEVLRRAEATAASTSRSLAL EVLRRAEATAASTSRSLALMYESEKVGVAS R R A S R S 4 2 0 0 0 0 1 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 11 1 1119.5632 O95721 O95721 52 62 SNAP29 Synaptosomal-associated protein 29 yes yes 2 4.2467E-05 196.11 By MS/MS 8 0 1 1 1155700 1155700 0 11509 423 12253 29059 23203 23203 1 14590 0 RAEENALQQK VRLNDSILQATEQRRRAEENALQQKACGSE TEQRRRAEENALQQKACGSEIMQKKQHLEI R R A Q K A 2 1 1 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 1 1185.6102 P15924 P15924 1269 1278 DSP Desmoplakin yes yes 2 0.010569 120.45 By MS/MS 3 0 1 1 815640 0 815640 11510 628 12254 29060 23204 23204 1 0 103820 RAEEQMLKER RRITYYREKEEEEQRRAEEQMLKEREERER EEEQRRAEEQMLKEREERERAERAKREEEL R R A E R E 1 2 0 0 0 1 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 10 2 1288.6558 Q14152 Q14152 817 826 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0031724 132.17 By MS/MS By matching 3.75 0.829 2 1 1 3 1 3347600 3305800 41778 11511 1422 12255 29061;29062;29063;29064 23205 23205 1 90424 5317.8 RAEFTVETR AYGPGIEPTGNMVKKRAEFTVETRSAGQGE GNMVKKRAEFTVETRSAGQGEVLVYVEDPA K R A T R S 1 2 0 0 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 9 1 1107.5673 P21333 P21333 301 309 FLNA Filamin-A yes yes 2 0.01698 109.29 By MS/MS 2 0 1 1 490590 490590 0 11512 677 12256 29065 23206 23206 1 165940 0 RAFLIEEQK YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA K R A Q K I 1 1 0 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 1 1132.6241 P49207 P49207 93 101 RPL34 60S ribosomal protein L34 yes yes 2 0.032236 101.46 By MS/MS 9.5 0.5 1 1 2 2361900 2361900 0 11513 945 12257 29066;29067 23207;23208 23207 2 95262 0 RAGELTEDEVER YAHVVLRKADIDLTKRAGELTEDEVERVIT LTKRAGELTEDEVERVITIMQNPRQYKIPD K R A E R V 1 2 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 12 1 1402.6688 P62269 P62269 55 66 RPS18 40S ribosomal protein S18 yes yes 2;3 2.378E-19 270.67 By MS/MS By MS/MS 9.22 0.416 7 2 7 2 37732000 37551000 180090 11514 1149 12258 29068;29069;29070;29071;29072;29073;29074;29075;29076 23209;23210;23211;23212;23213;23214 23212 6 944800 410670 RAIYQATYR YSYDLEVEQAYDLARRAIYQATYRDAYSGG AYDLARRAIYQATYRDAYSGGAVNLYHVRE R R A Y R D 2 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 9 1 1140.604 P28074 P28074 217 225 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.01353 111.06 By MS/MS By matching 9.33 0.471 2 1 2 1 5430100 5388800 41292 11515 751 12259 29077;29078;29079 23215 23215 1 114770 94160 RALDIPLVK LWAPRPFNLRSGRTRRALDIPLVKNWYREH RSGRTRRALDIPLVKNWYREHCPAGQPVKV R R A V K N 1 1 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 9 1 1023.6441 Q6P2Q9 Q6P2Q9 420 428 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0040665 131.62 By MS/MS 2.5 0.5 1 1 2 844960 844960 0 11516 1708 12260 29080;29081 23216 23216 1 243100 0 RALSSQHQAR NRAVQKLRREVEKAKRALSSQHQARIEIES VEKAKRALSSQHQARIEIESFYEGEDFSET K R A A R I 2 2 0 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 10 1 1152.6112 P11021 P11021 297 306 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 5.7616E-08 194.12 By MS/MS By matching 5.33 0.471 4 2 4 2 6692900 6661900 31028 11517 571 12261 29082;29083;29084;29085;29086;29087 23217;23218 23217 2 66062 26057 RANEFLEVGKK ______________________________ NALKRANEFLEVGKKQPALDVLYDVMKSKK K R A K K Q 1 1 1 0 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 11 2 1289.7092 Q14152 Q14152 14 24 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.00028967 134.75 By MS/MS 3 0 1 1 2143100 2143100 0 11518 1422 12262 29088 23219 23219 1 39213 0 RAPDQAAEIGSR LGSRGLCTRLATPPRRAPDQAAEIGSRGST PPRRAPDQAAEIGSRGSTKAQGPQQQPGSE R R A S R G 3 2 0 1 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 12 1 1269.6426 Q3ZCQ8 Q3ZCQ8 32 43 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 3.8504E-05 192.44 By MS/MS By matching 7.33 0.471 4 2 4 2 15084000 14967000 116490 11519 1580 12263 29089;29090;29091;29092;29093;29094 23220;23221 23220 2 230230 209790 RAPFDLFENK VEGQLEFRALLFIPRRAPFDLFENKKKKNN LFIPRRAPFDLFENKKKKNNIKLYVRRVFI R R A N K K 1 1 1 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 10 1 1235.6299 P08238;Q58FF7 P08238 338 347 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0035372 122.96 By MS/MS 5 0.816 1 1 1 3 18246000 18246000 0 11520 521 12264 29095;29096;29097 23222;23223;23224;23225;23226;23227 23227 6 1342600 0 RAPFDLFENKK VEGQLEFRALLFIPRRAPFDLFENKKKKNN FIPRRAPFDLFENKKKKNNIKLYVRRVFIM R R A K K K 1 1 1 1 0 0 1 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 11 2 1363.7248 P08238;Q58FF7 P08238 338 348 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 3 0.010235 101.71 By MS/MS 4.5 0.5 1 1 2 1987400 1987400 0 11521 521 12265 29098;29099 23228;23229 23228 1 158130 0 RAPFDLFENR VEGQLEFRALLFVPRRAPFDLFENRKKKNN LFVPRRAPFDLFENRKKKNNIKLYVRRVFI R R A N R K 1 2 1 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 10 1 1263.636 P07900 P07900 346 355 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0069077 112.3 By MS/MS 5 0.816 1 1 1 3 8122200 8122200 0 11522 513 12266 29100;29101;29102 23230;23231;23232 23230 3 564300 0 RAPTTATQR ______________________________ SSTSSKRAPTTATQRLKQDYLRIKKDPVPY K R A Q R L 2 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 9 1 1000.5414 Q8N2K1 Q8N2K1 8 16 UBE2J2 Ubiquitin-conjugating enzyme E2 J2 yes yes 2 0.011491 112.11 By MS/MS 8 0 1 1 507600 507600 0 11523 1909 12267 29103 23233 23233 1 6408.4 0 RAQSELAAHQK VGLKSKTHAVLVALKRAQSELAAHQKKILH VALKRAQSELAAHQKKILHVDNHIGISIAG K R A Q K K 3 1 0 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1237.6527 P25786 P25786 51 61 PSMA1 Proteasome subunit alpha type-1 yes yes 3 0.0005339 138.99 By MS/MS 8.5 0.5 1 1 2 749970 749970 0 11524 724 12268 29104;29105 23234 23234 1 10144 0 RASEARMSSSSR PASAPGRGNYGPPVRRASEARMSSSSRDSE PVRRASEARMSSSSRDSESWDHSGGAGDSS R R A S R D 2 3 0 0 0 0 1 0 0 0 0 0 1 0 0 5 0 0 0 0 0 0 12 2 1323.6313 Q9Y2J0 Q9Y2J0 235 246 RPH3A Rabphilin-3A yes yes 4 0.049515 47.844 By MS/MS 4 0 1 1 126190 126190 0 11525 2831 12269 29106 23235 23235 1181 0 11876 0 RATEEISKDLR GLLLFMDEADAFLRKRATEEISKDLRATLN FLRKRATEEISKDLRATLNAFLYHMGQHSN K R A L R A 1 2 0 1 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 2 1316.7048 Q5T9A4 Q5T9A4 420 430 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 3 0.015725 105.66 By MS/MS 5 0 1 1 499370 499370 0 11526 1638 12270 29107 23236 23236 1 5008.4 0 RATVVESSEK GDYYRYLAEVATGEKRATVVESSEKAYSEA ATGEKRATVVESSEKAYSEAHEISKEHMQP K R A E K A 1 1 0 0 0 0 2 0 0 0 0 1 0 0 0 2 1 0 0 2 0 0 10 1 1104.5775 P61981 P61981 143 152 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.0033612 123.96 By MS/MS 8 0 1 1 415720 415720 0 11527 1136 12271 29108 23237 23237 1 5248.4 0 RAYLQAR SLGCRVFTTVGSAEKRAYLQARFPQLDSTS TTVGSAEKRAYLQARFPQLDSTSFANSRDT K R A A R F 2 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 1 876.49298 P49327 P49327 1705 1711 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.035919 134.12 By MS/MS 2.5 1.12 1 1 1 1 4 5493000 5493000 0 11528 946 12272 29109;29110;29111;29112 23238 23238 1 1125200 0 RCDIIIISGR GEGREAKDCDPGSPRRCDIIIISGRKEKCE PGSPRRCDIIIISGRKEKCEAAKEALEALV R R C G R K 0 2 0 1 1 0 0 1 0 4 0 0 0 0 0 1 0 0 0 0 0 0 10 1 1201.6601 Q00341 Q00341 947 956 HDLBP Vigilin yes yes 2 0.0045477 117.25 By MS/MS 3 0 1 1 1600900 1600900 0 11529 1260 12273 29113 23239 23239 1 29293 0 RCLYASVLTAQPR DAIHRGGGQIIPTARRCLYASVLTAQPRLM ARRCLYASVLTAQPRLMEPIYLVEIQCPEQ R R C P R L 2 2 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 13 1 1533.8086 P13639 P13639 727 739 EEF2 Elongation factor 2 yes yes 3 0.010097 87.831 By MS/MS 4.5 0.5 1 1 2 1772900 1772900 0 11530 602 12274 29114;29115 23240 23240 1 138980 0 RCPHHER MAIYKQSQHMTEVVRRCPHHERCSDSDGLA QHMTEVVRRCPHHERCSDSDGLAPPQHLIR R R C E R C 0 2 0 0 1 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 7 1 990.45662 P04637 P04637 175 181 TP53 Cellular tumor antigen p53 yes yes 2 0.032508 137.18 By MS/MS 6 0 1 1 261400 261400 0 11531 476 12275 29116 23241 23241 1 1796.9 0 RDDDNELMTSGPRMR RSTVTVNTIDLGNKKRDDDNELMTSGPRMR RDDDNELMTSGPRMRVRDSTLHLKEGMKGQ K R D M R V 0 3 1 3 0 0 1 1 0 0 1 0 2 0 1 1 1 0 0 0 0 0 15 2 1791.7992 Q14571 Q14571 1837 1851 ITPR2 Inositol 1,4,5-trisphosphate receptor type 2 yes yes 2 0.082977 53.569 By MS/MS 1 0 1 1 0 0 0 11532 1445 12276 29117 23242 23242 1 0 0 RDEFEFLEK EIQTLKEEIEQSLTKRDEFEFLEKASKLRG EQSLTKRDEFEFLEKASKLRGISTKPVYIP K R D E K A 0 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 9 1 1211.5823 Q14258 Q14258 302 310 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.00858 114.86 By MS/MS 5 0 1 1 1351000 1351000 0 11533 1437 12277 29118 23243 23243 1 13550 0 RDEFLGR FKENVIRPILKAHFRRDEFLGRINEIVYFL PILKAHFRRDEFLGRINEIVYFLPFCHSEL R R D G R I 0 2 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 1 891.45626 Q9H078 Q9H078 555 561 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.051638 122.18 By MS/MS 6 0.816 1 1 1 3 13684000 13684000 0 11534 2402 12278 29119;29120;29121 23244 23244 1 98069 0 RDFTPAELRR DSDDDEPPPLPRLKRRDFTPAELRRFDGVQ PRLKRRDFTPAELRRFDGVQDPRILMAING R R D R R F 1 3 0 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 10 2 1259.6735 O00264 O00264 71 80 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.025622 99.568 By MS/MS 9 0.816 1 1 1 3 4982800 4982800 0 11535 96 12279 29122;29123;29124 23245 23245 1 78305 0 RDHFEEAMR SAMEVEEDDPVPEIRRDHFEEAMRFARRSV PVPEIRRDHFEEAMRFARRSVSDNDIRKYE R R D M R F 1 2 0 1 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 9 1 1189.5298 P55072 P55072 733 741 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0015085 128.81 By MS/MS 3.5 0.5 1 1 2 1145000 1145000 0 11536 1054 12280 29125;29126 23246 23246 1 97557 0 RDHFSIER RAPLASQGWKSRRARRDHFSIERAQQEAPA WKSRRARRDHFSIERAQQEAPAVRKLSSKG R R D E R A 0 2 0 1 0 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 8 1 1058.5257 Q9NUL7 Q9NUL7 104 111 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 3 0.0066495 111.06 By MS/MS 6 0 1 1 1269900 1269900 0 11537 2582 12281 29127 23247 23247 1 8729.5 0 RDLEAVNSR ALEIDGLEEKLSQCRRDLEAVNSRLHSREL KLSQCRRDLEAVNSRLHSRELSPEARRSLE R R D S R L 1 2 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 1 1058.5469 Q9P0B6 Q9P0B6 27 35 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 0.00031089 163.88 By MS/MS 10 0 1 1 421100 421100 0 11538 2662 12282 29128 23248 23248 1 22696 0 RDNYVPEVSALDQEIIEVDPDTK VRGISIKLQEEERERRDNYVPEVSALDQEI SALDQEIIEVDPDTKEMLKLLDFGSLSNLQ R R D T K E 1 1 1 4 0 1 3 0 0 2 1 1 0 0 2 1 1 0 1 3 0 0 23 1 2644.2868 P08708 P08708 81 103 RPS17 40S ribosomal protein S17 yes yes 3 0.0033836 79.635 By MS/MS 9 0 1 1 57792 57792 0 11539 527 12283 29129 23249 23249 1 1137.4 0 RDPGNTEPVK LPHEQKMSVLNMVVRRDPGNTEPVKAKEEL NMVVRRDPGNTEPVKAKEELIFHCGFRRFR R R D V K A 0 1 1 1 0 0 1 1 0 0 0 1 0 0 2 0 1 0 0 1 0 0 10 1 1111.5622 Q2NL82 Q2NL82 600 609 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 0.018873 104.42 By MS/MS 4 0 1 1 948540 948540 0 11540 1570 12284 29130 23250 23250 1 89264 0 RDPNLFPFEK ELQLESPKLHAEAIKRDPNLFPFEKEGPHY AEAIKRDPNLFPFEKEGPHYTPPIPNYQPP K R D E K E 0 1 1 1 0 0 1 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 10 1 1261.6455 Q9NQ50 Q9NQ50 164 173 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2 0.011485 105.4 By MS/MS 9 0 1 1 0 0 0 11541 2536 12285 29131 23251 23251 1 0 0 RDPTAEQFQEELEK LEHMFRQLRFESTMKRDPTAEQFQEELEKF KRDPTAEQFQEELEKFQQAIDSREDPVSCA K R D E K F 1 1 0 1 0 2 4 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 14 1 1718.8111 P31944 P31944 54 67 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2;3 1.5218E-05 161.21 By MS/MS 3 0 2 2 325470 0 325470 11542 792 12286 29132;29133 23252;23253 23252 2 0 41427 RDPTLLVSVVR KQLWMVLQRSLVTVRRDPTLLVSVVRIIER VTVRRDPTLLVSVVRIIEREEKIDRRILDR R R D V R I 0 2 0 1 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 3 0 0 11 1 1253.7456 O60645 O60645 204 214 EXOC3 Exocyst complex component 3 yes yes 2 0.02721 96.113 By MS/MS 4.5 0.5 1 1 2 1257500 1257500 0 11543 267 12287 29134;29135 23254 23254 1 52132 0 RDQALTEEHAR EINGKWDHVRQLVPRRDQALTEEHARQQHN LVPRRDQALTEEHARQQHNERLRKQFGAQA R R D A R Q 2 2 0 1 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 11 1 1324.6484 P12814 P12814 614 624 ACTN1 Alpha-actinin-1 yes yes 3 0.00091406 147.26 By MS/MS 4 0 1 1 817170 817170 0 11544 595 12288 29136 23255 23255 1 76901 0 RDQEDALNQRYPENK HFMKDCPMRRKVRRRRDQEDALNQRYPENK RDQEDALNQRYPENKEKRSKEDKEIHNKYT R R D N K E 1 2 2 2 0 2 2 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 15 2 1874.8871 Q5VYS8 Q5VYS8 1370 1384 ZCCHC6 Terminal uridylyltransferase 7 yes yes 3 0.024101 78.324 By MS/MS 6 0 1 1 3674800 3674800 0 11545 1657 12289 29137 23256 23256 1 25261 0 RDYLHYIR GVVTKMKMQRTIVIRRDYLHYIRKYNRFEK QRTIVIRRDYLHYIRKYNRFEKRHKNMSVH R R D I R K 0 2 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 0 8 1 1134.5934 P62280 P62280 90 97 RPS11 40S ribosomal protein S11 yes yes 3 0.019431 104.01 By MS/MS 9 0 1 1 3751600 3751600 0 11546 1152 12290 29138 23257 23257 1 73832 0 REAGEDEEGFLSK SGGSTMDSSAGSKARREAGEDEEGFLSKLK ARREAGEDEEGFLSKLKKMFTS________ R R E S K L 1 1 0 1 0 0 4 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 13 1 1465.6685 Q96EY1 Q96EY1 461 473 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2;3 0.00063978 164.22 By MS/MS 7 0 2 2 5411500 5411500 0 11547 2150 12291 29139;29140 23258;23259 23258 2 84951 0 REDAVSKEVTR YKNVKFVLKHKVAQKREDAVSKEVTRKLSE VAQKREDAVSKEVTRKLSEADNRKMSRKEK K R E T R K 1 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 11 2 1288.6735 Q9UNL2 Q9UNL2 92 102 SSR3 Translocon-associated protein subunit gamma yes yes 3 0.012998 96.334 By MS/MS 9 0 1 1 1225900 1225900 0 11548 2790 12292 29141 23260 23260 1 24126 0 REDLVVAPAGITLK KEEEHDCFLEEIMTKREDLVVAPAGITLKE KREDLVVAPAGITLKEANEILQRSKKGKLP K R E L K E 2 1 0 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 14 1 1480.8613 P12268 P12268 182 195 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.0022525 131.35 By MS/MS 6.5 0.5 1 1 2 2234400 2234400 0 11549 590 12293 29142;29143 23261 23261 1 18953 0 REEEEFNTGPLSVLTQSVK LNKPKSEMTPEELQKREEEEFNTGPLSVLT EFNTGPLSVLTQSVKNNTQVLINCRNNKKL K R E V K N 0 1 1 0 0 1 4 1 0 0 2 1 0 1 1 2 2 0 0 2 0 0 19 1 2162.0855 P62316 P62316 19 37 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 3 0.0016534 98.169 By MS/MS 10 0 1 1 97539 97539 0 11550 1156 12294 29144 23262;23263 23262 2 5257 0 REEQKELQR IARQMKAYEKQRGTRREEQKELQRAASQDH KQRGTRREEQKELQRAASQDHVRGFLEKES R R E Q R A 0 2 0 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 2 1214.6367 Q9Y314 Q9Y314 96 104 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.0022344 113.44 By MS/MS 8 0 1 1 357840 357840 0 11551 2854 12295 29145 23264 23264 1 4517.7 0 REFTKEDYK GNTYGNFSLATMFPRREFTKEDYKKKLLDL ATMFPRREFTKEDYKKKLLDLELAPSASVV R R E Y K K 0 1 0 1 0 0 2 0 0 0 0 2 0 1 0 0 1 0 1 0 0 0 9 2 1214.5932 Q92575 Q92575 369 377 UBXN4 UBX domain-containing protein 4 yes yes 3 0.025572 104.05 By MS/MS 5 0 1 1 922770 922770 0 11552 2058 12296 29146 23265 23265 1 9254.9 0 REGPPFISEAAVR ______________________________ AKREGPPFISEAAVRGNAAVLDYCRTSVSA K R E V R G 2 2 0 0 0 0 2 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 13 1 1427.7521 Q9BV81 Q9BV81 8 20 EMC6 ER membrane protein complex subunit 6 yes yes 2;3 0.038456 107.53 By MS/MS 10 0 2 2 1185300 1185300 0 11553 2330 12297 29147;29148 23266;23267 23266 2 63886 0 REHEREER KFGAARNPEDVDRERREHEREERMGQLRGS EDVDRERREHEREERMGQLRGSATRALPPG R R E E R M 0 3 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 1139.5432 P49674 P49674 309 316 CSNK1E Casein kinase I isoform epsilon yes yes 2 0.023591 134.26 By MS/MS 7 0 1 1 84126 84126 0 11554 955 12298 29149 23268 23268 1 1320.6 0 RELAHCQK HLPHSAAPARKAELRRELAHCQKVAREMHS ARKAELRRELAHCQKVAREMHSLRAEALYR R R E Q K V 1 1 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1040.5185 O00411 O00411 760 767 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.043155 61.78 By MS/MS 3 0 1 1 0 0 0 11555 104 12299 29150 23269 23269 1 0 0 REPLSLINVR GARPGPGVWDPNWDRREPLSLINVRKRNVE PNWDRREPLSLINVRKRNVESGEEELASKL R R E V R K 0 2 1 0 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 10 1 1195.7037 Q96HS1 Q96HS1 65 74 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 0.001038 140.49 By MS/MS 8.67 0.745 3 2 1 6 35036000 35036000 0 11556 2168 12300 29151;29152;29153;29154;29155;29156 23270;23271;23272;23273;23274 23271 5 476510 0 REQAEEER RGAGSIREAGGAFGKREQAEEERYFRAQSR AGGAFGKREQAEEERYFRAQSREQLAALKK K R E E R Y 1 2 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1045.4789 Q9UII2 Q9UII2 50 57 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 0.0012586 161.79 By MS/MS 10 0 1 1 318810 318810 0 11557 2743 12301 29157 23275 23275 1 17183 0 RESPESEGPIYEGLIL INKHFHNTLEHLRLRRESPESEGPIYEGLI ESPESEGPIYEGLIL_______________ R R E I L - 0 1 0 0 0 0 4 2 0 2 2 0 0 0 2 2 0 0 1 0 0 0 16 1 1787.8941 Q96QK1 Q96QK1 781 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0085767 109.6 By MS/MS 5 0 1 1 292140 292140 0 11558 2217 12302 29158 23276 23276 1 2930 0 RESPSEER DIKTSQKFPRVPLPRRESPSEERLEPKREV PRVPLPRRESPSEERLEPKREVKEPRKEGE R R E E R L 0 2 0 0 0 0 3 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 8 1 988.45739 Q6PJG2 Q6PJG2 921 928 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 2 0.0074418 141.52 By MS/MS 4.5 2.5 1 1 2 1301800 1301800 0 11559 1719 12303 29159;29160 23277;23278 23278 2 55475 0 RETYTEDFIKK HTAFVIPKKNVPTSKRETYTEDFIKKQIEE PTSKRETYTEDFIKKQIEEFNIGKRHLANM K R E K K Q 0 1 0 1 0 0 2 0 0 1 0 2 0 1 0 0 2 0 1 0 0 0 11 2 1428.7249 P82933 P82933 66 76 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 2.2345E-06 171.67 By MS/MS 7 0 1 1 2873200 2873200 0 11560 1239 12304 29161 23279 23279 1 45104 0 RFDAQTGADREVQR PAIIFIDEIDAIATKRFDAQTGADREVQRI KRFDAQTGADREVQRILLELLNQMDGFDQN K R F Q R I 2 3 0 2 0 2 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 14 2 1647.8077 P43686 P43686 274 287 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.0059658 98.368 By MS/MS 6 0 1 1 17718000 17718000 0 11561 900 12305 29162 23280 23280 1 121800 0 RFDDAVVQSDMK NPTNTVFDAKRLIGRRFDDAVVQSDMKHWP IGRRFDDAVVQSDMKHWPFMVVNDAGRPKV R R F M K H 1 1 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 12 1 1409.6609 P11142 P11142 77 88 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.0012469 139.76 By MS/MS 5 0 2 2 1584600 1584600 0 11562 572 12306;12307 29163;29164 23281;23282 23282 263 2 15893 0 RFDDKYTLK GMDPDDIWQLSSSLKRFDDKYTLKLTFISG LSSSLKRFDDKYTLKLTFISGRTKQQREAE K R F L K L 0 1 0 2 0 0 0 0 0 0 1 2 0 1 0 0 1 0 1 0 0 0 9 2 1184.619 Q15005 Q15005 165 173 SPCS2 Signal peptidase complex subunit 2 yes yes 3 0.047972 85.731 By MS/MS 9 0 1 1 677770 677770 0 11563 1469 12308 29165 23283 23283 1 13339 0 RFDGVQDPR LPRLKRRDFTPAELRRFDGVQDPRILMAIN TPAELRRFDGVQDPRILMAINGKVFDVTKG R R F P R I 0 2 0 2 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 9 1 1088.5363 O00264 O00264 80 88 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.034028 80.231 By MS/MS 8.5 0.5 1 1 2 1556700 1556700 0 11564 96 12309 29166;29167 23284;23285 23284 2 22950 0 RFDVSGYPTLK PLAKVDATAETDLAKRFDVSGYPTLKIFRK DLAKRFDVSGYPTLKIFRKGRPYDYNGPRE K R F L K I 0 1 0 1 0 0 0 1 0 0 1 1 0 1 1 1 1 0 1 1 0 0 11 1 1281.6717 P13667 P13667 246 256 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.02529 97.597 By MS/MS 5 0 1 1 713980 713980 0 11565 604 12310 29168 23286 23286 1 7160.8 0 RFEECISQSAVK EGFQVRMFEFQNFERRFEECISQSAVKTKF FERRFEECISQSAVKTKFEQHTVRAKQIAE R R F V K T 1 1 0 0 1 1 2 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 12 1 1452.7031 O95140 O95140 344 355 MFN2 Mitofusin-2 yes yes 2 0.002716 129 By MS/MS 5 0 1 1 871290 871290 0 11566 386 12311 29169 23287 23287 1 8738.6 0 RFEEQQKNDVEK QYHQEIEEFVSNLVKRFEEQQKNDVEKTSF LVKRFEEQQKNDVEKTSFNLLPQPSSIVLE K R F E K T 0 1 1 1 0 2 3 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 12 2 1548.7532 Q6NZY4 Q6NZY4 122 133 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 3 0.012389 122.46 By MS/MS 4 0 1 1 752780 752780 0 11567 1695 12312 29170 23288 23288 1 70841 0 RFEKPLEEK KIIDRRPERRPPRERRFEKPLEEKGEGGEF RPPRERRFEKPLEEKGEGGEFSVDRPIIDR R R F E K G 0 1 0 0 0 0 3 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 9 2 1174.6346 Q8NC51 Q8NC51 137 145 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.0013437 126.71 By MS/MS By MS/MS 7 1.15 3 1 1 1 5 1 39943000 39683000 260820 11568 1946 12313 29171;29172;29173;29174;29175;29176 23289;23290;23291;23292 23290 4 287790 267260 RFHVFAR KPNLQTFNTILKCLRRFHVFARSPALQVLR NTILKCLRRFHVFARSPALQVLREMKAIGI R R F A R S 1 2 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 1 0 0 7 1 931.51405 Q96EY7 Q96EY7 344 350 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 3 0.047348 97.602 By MS/MS 5 0 1 1 688690 688690 0 11569 2151 12314 29177 23293 23293 1 6907.2 0 RFPGYDSESK KGAVDGGLSIPHSTKRFPGYDSESKEFNAE PHSTKRFPGYDSESKEFNAEVHRKHIMGQN K R F S K E 0 1 0 1 0 0 1 1 0 0 0 1 0 1 1 2 0 0 1 0 0 0 10 1 1184.5462 P46777 P46777 179 188 RPL5 60S ribosomal protein L5 yes yes 2 0.031626 96.034 By MS/MS 7.5 0.5 1 1 2 722450 722450 0 11570 915 12315 29178;29179 23294 23294 1 10353 0 RGADDDRPSWR DRGPRRGPEEDRFSRRGADDDRPSWRNTDD RFSRRGADDDRPSWRNTDDDRPPRRIADED R R G W R N 1 3 0 3 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 11 2 1329.6174 Q14152 Q14152 980 990 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00012082 167.67 By MS/MS 3 0 1 1 861530 861530 0 11571 1422 12316 29180 23295 23295 1 15764 0 RGCFCPEGMVR STRNIPVFDENLPCKRGCFCPEGMVRNSKG LPCKRGCFCPEGMVRNSKGICVFPNDCPCS K R G V R N 0 2 0 0 2 0 1 2 0 0 0 0 1 1 1 0 0 0 0 1 0 0 11 1 1367.5897 Q7Z5P9 Q7Z5P9 1214 1224 MUC19 Mucin-19 yes yes 2 0.030574 71.379 By MS/MS 8 0 1 1 337640 337640 0 11572 1800 12317 29181 23296 23296 941 0 4262.6 0 RGDDSFGDKYR RARPATDSFDDYPPRRGDDSFGDKYRDRYD YPPRRGDDSFGDKYRDRYDSDRYRDGYRDG R R G Y R D 0 2 0 3 0 0 0 2 0 0 0 1 0 1 0 1 0 0 1 0 0 0 11 2 1314.5953 P23588 P23588 215 225 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 3.686E-05 168.83 By MS/MS By MS/MS 5.5 0.922 1 5 2 2 8 2 24770000 24371000 398480 11573 708 12318 29182;29183;29184;29185;29186;29187;29188;29189;29190;29191 23297;23298;23299;23300;23301 23297 5 274500 334640 RGDFIPGLR GTSVERAAASTDYYKRGDFIPGLRVDGMDI STDYYKRGDFIPGLRVDGMDILCVREATRF K R G L R V 0 2 0 1 0 0 0 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 1 1029.572 P08559 P08559 245 253 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0050078 128.12 By MS/MS 7 0 1 1 3497200 3497200 0 11574 524 12319 29192 23302 23302 1 54899 0 RGDIIGVQGNPGK YKSEEEFIHINNKLRRGDIIGVQGNPGKTK LRRGDIIGVQGNPGKTKKGELSIIPYEITL R R G G K T 0 1 1 1 0 1 0 4 0 2 0 1 0 0 1 0 0 0 0 1 0 0 13 1 1309.7102 Q15046 Q15046 178 190 KARS Lysine--tRNA ligase yes yes 2 0.021874 86.313 By MS/MS 5.5 0.5 1 1 2 1937800 1937800 0 11575 1481 12320 29193;29194 23303 23303 0 18679 0 RGDIVFVDR YGFATIASAIPAYSKRGDIVFVDRAACFAI IPAYSKRGDIVFVDRAACFAIQKGLQASRS K R G D R A 0 2 0 2 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 9 1 1075.5774 O15269 O15269 181 189 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.00858 114.86 By MS/MS 6.5 0.5 1 1 2 29038000 29038000 0 11576 177 12321 29195;29196 23304 23304 1 208020 0 RGDKEAPPPVLLTPK EWETASESSDFTSERRGDKEAPPPVLLTPK RGDKEAPPPVLLTPKAVGTPGGGGGGAVPG R R G P K A 1 1 0 1 0 0 1 1 0 0 2 2 0 0 4 0 1 0 0 1 0 0 15 2 1616.925 P48634 P48634 1335 1349 PRRC2A Protein PRRC2A yes yes 3 0.0021506 110.55 By MS/MS 2 0.816 1 1 1 3 1824100 1824100 0 11577 938 12322 29197;29198;29199 23305 23305 1 527460 0 RGDLDKAYTK EFAGLAESIFKNAERRGDLDKAYTKLIRGV KNAERRGDLDKAYTKLIRGVFVNVEKVANE R R G T K L 1 1 0 2 0 0 0 1 0 0 1 2 0 0 0 0 1 0 1 0 0 0 10 2 1165.6091 Q9NV70 Q9NV70 695 704 EXOC1 Exocyst complex component 1 yes yes 2 0.033764 86.898 By MS/MS 4 0 1 1 0 0 0 11578 2589 12323 29200 23306 23306 1 0 0 RGDLPFVVPR DAMNREVSSLKNKLRRGDLPFVVPRRMARK KNKLRRGDLPFVVPRRMARKGAGDGSDEEV R R G P R R 0 2 0 1 0 0 0 1 0 0 1 0 0 1 2 0 0 0 0 2 0 0 10 1 1154.656 P35579 P35579 1923 1932 MYH9 Myosin-9 yes yes 2 0.0068135 112.36 By MS/MS 2 0 1 1 1281100 1281100 0 11579 824 12324 29201 23307 23307 1 433310 0 RGDTYELQVR SAPTFINFPAKGKPKRGDTYELQVRGFSAE KGKPKRGDTYELQVRGFSAEQIARWIADRT K R G V R G 0 2 0 1 0 1 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 1 1235.6258 Q9H0U3 Q9H0U3 150 159 MAGT1 Magnesium transporter protein 1 yes yes 2 0.0025843 128.35 By MS/MS 3.6 2.42 1 1 1 1 1 5 2672800 2672800 0 11580 2415 12325 29202;29203;29204;29205;29206 23308;23309;23310 23308 3 451800 0 RGEAHLAVNDFELAR KALELDSNNEKGLFRRGEAHLAVNDFELAR RGEAHLAVNDFELARADFQKVLQLYPNNKA R R G A R A 3 2 1 1 0 0 2 1 1 0 2 0 0 1 0 0 0 0 0 1 0 0 15 1 1696.8645 Q02790 Q02790 359 373 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 3 0.003013 105.17 By MS/MS 6.5 0.5 1 1 2 10787000 10787000 0 11581 1279 12326 29207;29208 23311 23311 1 76134 0 RGEGRDEDR ADSEWRRGPPEKEWRRGEGRDEDRSHRRDE PEKEWRRGEGRDEDRSHRRDEERPRRLGDD R R G D R S 0 3 0 2 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 1088.4959 Q14152 Q14152 920 928 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0003082 164.96 By MS/MS 2.5 0.5 2 2 4 344550 344550 0 11582 1422 12327 29209;29210;29211;29212 23312;23313;23314 23312 3 87124 0 RGELEPQLGSPQQKPK KIIDGLTGEKAIYKRRGELEPQLGSPQQKP GELEPQLGSPQQKPKRLRLVVDVSGSMYRF R R G P K R 0 1 0 0 0 3 2 2 0 0 2 2 0 0 3 1 0 0 0 0 0 0 16 2 1790.9639 A3KMH1 A3KMH1 1698 1713 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 3 0.00049052 156.57 By MS/MS 2.5 0.5 1 1 2 539380 539380 0 11583 14 12328 29213;29214 23315 23315 1 136950 0 RGESMQPNR TGKYVPPSLRDGASRRGESMQPNRRADDNA RDGASRRGESMQPNRRADDNATIRVTNLSE R R G N R R 0 2 1 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 9 1 1073.5036 O75821 O75821 225 233 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.034602 100.25 By MS/MS 7.8 0.748 2 2 1 5 3455200 3455200 0 11584 348 12329 29215;29216;29217;29218;29219 23316;23317 23316 2 54934 0 RGESMQPNRR TGKYVPPSLRDGASRRGESMQPNRRADDNA DGASRRGESMQPNRRADDNATIRVTNLSED R R G R R A 0 3 1 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 10 2 1229.6047 O75821 O75821 225 234 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.022282 83.862 By MS/MS 8 0.816 1 1 1 3 1819900 1819900 0 11585 348 12330 29220;29221;29222 23318;23319 23319 2 28993 0 RGGADDER DRGPRRGMDDDRGPRRGGADDERSSWRNAD DDDRGPRRGGADDERSSWRNADDDRGPRRG R R G E R S 1 2 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 874.38931 Q14152 Q14152 1050 1057 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.04871 106.04 By MS/MS 7 0 1 1 123220 123220 0 11586 1422 12331 29223 23320 23320 1 1934.4 0 RGGDGQINEQVEK HVDEEDCLGVQREDRRGGDGQINEQVEKLR DRRGGDGQINEQVEKLRRPEGASNESERD_ R R G E K L 0 1 1 1 0 2 2 3 0 1 0 1 0 0 0 0 0 0 0 1 0 0 13 1 1428.6957 O75381 O75381 351 363 PEX14 Peroxisomal membrane protein PEX14 yes yes 2;3 0.013446 106.79 By MS/MS 6 0 2 2 2157100 2157100 0 11587 319 12332 29224;29225 23321;23322 23321 2 14829 0 RGGEVLDSSHDDIKLEK ASMQQQVNQQIPQEKRGGEVLDSSHDDIKL GEVLDSSHDDIKLEKSNILLLGPTGSGKTL K R G E K S 0 1 0 3 0 0 2 2 1 1 2 2 0 0 0 2 0 0 0 1 0 0 17 2 1896.9541 O76031 O76031 270 286 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 4 0.049881 50.053 By MS/MS 5 0 1 1 2457900 2457900 0 11588 360 12333 29226 23323 23323 1 24652 0 RGGGGGGGGGFR ______________________________ RSRRGGGGGGGGGFRGFSSGSAVVSGGSRR R R G F R G 0 2 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 0 0 0 12 1 990.47437 CON__Q3TTY5 CON__Q3TTY5 11 22 yes yes 2 0.0491 96.948 By matching By MS/MS 1.67 0.471 1 2 1 2 278080 75326 202760 + 11589 65 12334 29227;29228;29229 23324 23324 1 25478 218460 RGGPNYQEGLR YQGPLKEHEVTIFVRRGGPNYQEGLRVMGE IFVRRGGPNYQEGLRVMGEVGKTTGIPIHV R R G L R V 0 2 1 0 0 1 1 3 0 0 1 0 0 0 1 0 0 0 1 0 0 0 11 1 1245.6214 P53396 P53396 379 389 ACLY ATP-citrate synthase yes yes 2;3 0.00033604 152.04 By MS/MS 3.8 0.748 2 2 1 5 10013000 10013000 0 11590 1030 12335 29230;29231;29232;29233;29234 23325;23326 23325 2 856450 0 RGHSAQIAK VDRIKEAVRSKNMARRGHSAQIAKPIRPGQ SKNMARRGHSAQIAKPIRPGQHPAASPTHP R R G A K P 2 1 0 0 0 1 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 9 1 966.53591 P33176;Q12840 P33176 914 922 KIF5B;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A yes no 3 0.0027063 111.06 By MS/MS 4 0 1 1 165320 165320 0 11591 800 12336 29235 23327 23327 1 15557 0 RGLDDDRGPWR DRGPRRGMDDDRGPRRGLDDDRGPWRNADD RGPRRGLDDDRGPWRNADDDRIPRRGAEDD R R G W R N 0 3 0 3 0 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 11 2 1341.6538 Q14152 Q14152 1111 1121 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.039004 72.2 By MS/MS 6.5 0.5 1 1 2 3248700 3248700 0 11592 1422 12337 29236;29237 23328 23328 1 33765 0 RGLGAGAGAGEESPATSLPR LVLLGAYRLWVRWGRRGLGAGAGAGEESPA GAGAGEESPATSLPRMKKRDFSLEQLRQYD R R G P R M 4 2 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 20 1 1852.9391 O15173 O15173 78 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 3 3.2367E-05 115.26 By MS/MS 8.5 0.5 1 1 2 1275500 1275500 0 11593 168 12338 29238;29239 23329;23330 23329 2 20085 0 RGMDDDRGPR DREPSLRPDDDRVPRRGMDDDRGPRRGPEE DRVPRRGMDDDRGPRRGPEEDRFSRRGADD R R G P R R 0 3 0 3 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 10 2 1173.5309 Q14152 Q14152 960 969 EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 2 0.051859 101.46 By MS/MS 3 0.816 1 1 1 3 3113100 3113100 0 11594 1422 12339 29240;29241;29242 23331 23331 1 166900 0 RGPAEESSSWR REDRFRRPRDEGGWRRGPAEESSSWRDSSR GGWRRGPAEESSSWRDSSRRDDRDRDDRRR R R G W R D 1 2 0 0 0 0 2 1 0 0 0 0 0 0 1 3 0 1 0 0 0 0 11 1 1260.5847 Q14152 Q14152 1250 1260 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 3.7823E-05 172.21 By MS/MS By matching 4 1.55 3 1 1 4 1 10042000 9989200 52887 11595 1422 12340 29243;29244;29245;29246;29247 23332;23333;23334;23335 23332 4 209900 6731.8 RGPAGIGR LPTVLIIAFLLYTIRRGPAGIGRTGRGMGG FLLYTIRRGPAGIGRTGRGMGGLFSVGETT R R G G R T 1 2 0 0 0 0 0 3 0 1 0 0 0 0 1 0 0 0 0 0 0 0 8 1 782.45112 Q9Y4W6 Q9Y4W6 273 280 AFG3L2 AFG3-like protein 2 yes yes 2 0.047559 106.42 By MS/MS 5 0 1 1 880380 880380 0 11596 2902 12341 29248 23336 23336 1 8829.8 0 RGPEEDRFSR DRVPRRGMDDDRGPRRGPEEDRFSRRGADD DRGPRRGPEEDRFSRRGADDDRPSWRNTDD R R G S R R 0 3 0 1 0 0 2 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 10 2 1247.6007 Q14152 Q14152 970 979 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00094642 144.65 By MS/MS 3.64 1.72 1 2 3 2 1 1 1 11 117640000 117640000 0 11597 1422 12342 29249;29250;29251;29252;29253;29254;29255;29256;29257;29258;29259 23337;23338;23339;23340;23341;23342;23343 23338 7 3766600 0 RGPGLYYVDSEGNR GMGLSMGTMICGWDKRGPGLYYVDSEGNRI KRGPGLYYVDSEGNRISGATFSVGSGSVYA K R G N R I 0 2 1 1 0 0 1 3 0 0 1 0 0 0 1 1 0 0 2 1 0 0 14 1 1581.7536 P28074 P28074 166 179 PSMB5 Proteasome subunit beta type-5 yes yes 2;3 0.0015699 149.41 By MS/MS 9 0 2 2 5738100 5738100 0 11598 751 12343 29260;29261 23344;23345 23345 2 112930 0 RGPPEKEWR EGTWRKGPEADSEWRRGPPEKEWRRGEGRD ADSEWRRGPPEKEWRRGEGRDEDRSHRRDE R R G W R R 0 2 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 9 2 1153.5992 Q14152 Q14152 911 919 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0014105 141.91 By MS/MS By matching 3 0 3 2 1 8233000 8194600 38374 11599 1422 12344 29262;29263;29264 23346;23347 23346 2 149940 4884.5 RGQAALDR IFWRTVRGMLPHKTKRGQAALDRLKVFDGI MLPHKTKRGQAALDRLKVFDGIPPPYDKKK K R G D R L 2 2 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 885.47806 P40429 P40429 94 101 RPL13A 60S ribosomal protein L13a yes yes 2 0.045734 107.01 By MS/MS 8.5 0.5 1 1 2 3025500 3025500 0 11600 859 12345 29265;29266 23348 23348 1 40899 0 RGSNTTSHLHQAVAK FSVLQHVLGAGPHVKRGSNTTSHLHQAVAK RGSNTTSHLHQAVAKATQQPFDVSAFNASY K R G A K A 2 1 1 0 0 1 0 1 2 0 1 1 0 0 0 2 2 0 0 1 0 0 15 1 1605.8336 P22695 P22695 301 315 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 3 0.0052525 95.822 By MS/MS 7 0 1 1 1239800 1239800 0 11601 696 12346 29267 23349 23349 1 19463 0 RGVITDQNSDGYCQTGTMSR VTSGGGGTSRMYYSRRGVITDQNSDGYCQT DQNSDGYCQTGTMSRHQNQNTIQELLQNCS R R G S R H 0 2 1 2 1 2 0 3 0 1 0 0 1 0 0 2 3 0 1 1 0 0 20 1 2244.9852 P15924 P15924 45 64 DSP Desmoplakin yes yes 3 0.0013036 92.671 By MS/MS 10 0 1 1 42346 0 42346 11602 628 12347 29268 23350 23350 304 1 0 54215 RGVTIKPTVDDD RVEKHWRLIGWGQIRRGVTIKPTVDDD___ QIRRGVTIKPTVDDD_______________ R R G D D - 0 1 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 12 2 1314.6779 P41091;Q2VIR3 P41091 461 472 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.011358 102.95 By MS/MS 6 0 1 1 3363100 3363100 0 11603 866 12348 29269 23351 23351 1 23119 0 RHDAETNITTEK SSRSHAVFNIIFTQKRHDAETNITTEKVSK TQKRHDAETNITTEKVSKISLVDLAGSERA K R H E K V 1 1 1 1 0 0 2 0 1 1 0 1 0 0 0 0 3 0 0 0 0 0 12 1 1413.6848 Q12756 Q12756 229 240 KIF1A Kinesin-like protein KIF1A yes yes 3 0.0058946 93.011 By MS/MS 2 0 1 1 189080 189080 0 11604 1324 12349 29270 23352 23352 1 63954 0 RHEVLTR LLVIGTKLDQIHETKRHEVLTRTAFLAEDF LDQIHETKRHEVLTRTAFLAEDFNPEEINL K R H T R T 0 2 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 7 1 909.51445 Q5HYI8 Q5HYI8 157 163 RABL3 Rab-like protein 3 yes yes 3 0.032227 87.639 By MS/MS 8 0 1 1 567360 567360 0 11605 1601 12350 29271 23353 23353 1 7162.9 0 RHLFTPADK PYCGMLSKSDIKESRRHLFTPADKRIPRIR DIKESRRHLFTPADKRIPRIRIETRQASTL R R H D K R 1 1 0 1 0 0 0 0 1 0 1 1 0 1 1 0 1 0 0 0 0 0 9 1 1083.5825 Q9Y2L1 Q9Y2L1 370 378 DIS3 Exosome complex exonuclease RRP44 yes yes 3 0.0041738 102.62 By MS/MS 4 0 1 1 522460 522460 0 11606 2834 12351 29272 23354 23354 1 49167 0 RHPNTQQR SDNDFVTPEPRRTTRRHPNTQQRASKKKPK EPRRTTRRHPNTQQRASKKKPKVVFSSDES R R H Q R A 0 2 1 0 0 2 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 8 1 1035.5322 Q15021 Q15021 1348 1355 NCAPD2 Condensin complex subunit 1 yes yes 3 0.0041413 118.74 By MS/MS 3 0 1 1 39599 39599 0 11607 1474 12352 29273 23355 23355 1 724.55 0 RIEDNLPAGEE LKGDGVTEIRMRFIRRIEDNLPAGEE____ RFIRRIEDNLPAGEE_______________ R R I E E - 1 1 1 1 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 11 1 1241.5888 O43617 O43617 170 180 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2 0.023405 98.04 By MS/MS 9 0 1 1 0 0 0 11608 222 12353 29274 23356 23356 1 0 0 RIEELNKTANGNVEAK YVYFENSSSNPYLVRRIEELNKTANGNVEA IEELNKTANGNVEAKVVCLFRRRDISSSLN R R I A K V 2 1 3 0 0 0 3 1 0 1 1 2 0 0 0 0 1 0 0 1 0 0 16 2 1784.9381 Q13330;O94776 O94776 26 41 MTA1;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA2 no no 3 0.0042829 97.073 By MS/MS 5 0 1 1 768840 768840 0 11609 365;1371 12354 29275 23357 23357 1 7711 0 RIFHTVTTTDDPVIR DRITTRSEKPLRSIKRIFHTVTTTDDPVIR RIFHTVTTTDDPVIRKLAKTQGNVFATDAI K R I I R K 0 2 0 2 0 0 0 0 1 2 0 0 0 1 1 0 4 0 0 2 0 0 15 1 1769.9424 O15371 O15371 222 236 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 0.018349 96.067 By MS/MS 5.8 0.748 2 2 1 5 24534000 24534000 0 11610 185 12355 29276;29277;29278;29279;29280 23358;23359 23358 2 219390 0 RIGIFGQDEDVTSK MITGDNKGTAVAICRRIGIFGQDEDVTSKA RRIGIFGQDEDVTSKAFTGREFDELNPSAQ R R I S K A 0 1 0 2 0 1 1 2 0 2 0 1 0 1 0 1 1 0 0 1 0 0 14 1 1563.7893 P16615 P16615 637 650 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 2.1077E-10 228.12 By MS/MS 3 1.41 2 2 2 2 2 10 13809000 13809000 0 11611 635 12356 29281;29282;29283;29284;29285;29286;29287;29288;29289;29290 23360;23361;23362;23363;23364;23365;23366;23367;23368 23361 8 2038100 0 RIHGVGFK INEVVTREYTINIHKRIHGVGFKKRAPRAL YTINIHKRIHGVGFKKRAPRALKEIRKFAM K R I F K K 0 1 0 0 0 0 0 2 1 1 0 1 0 1 0 0 0 0 0 1 0 0 8 1 912.52937 P62899 P62899 32 39 RPL31 60S ribosomal protein L31 yes yes 3 0.014377 98.523 By MS/MS 9.5 0.5 1 1 2 207170 207170 0 11612 1183 12357 29291;29292 23369 23369 1 9280.1 0 RIILLAEGR NIKPQVDRYRLKNGRRIILLAEGRLVNLGC RLKNGRRIILLAEGRLVNLGCAMGHPSFVM R R I G R L 1 2 0 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 9 1 1039.6502 P23526 P23526 335 343 AHCY Adenosylhomocysteinase yes yes 2 0.022059 106.68 By MS/MS 7 0 1 1 1946600 1946600 0 11613 706 12358 29293 23370 23370 1 30559 0 RIKDYDANFK TERMKKTMASQVSIRRIKDYDANFKIKDFP QVSIRRIKDYDANFKIKDFPEKAKDIFIEA R R I F K I 1 1 1 2 0 0 0 0 0 1 0 2 0 1 0 0 0 0 1 0 0 0 10 2 1268.6513 Q9BRJ2 Q9BRJ2 124 133 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 3 0.027486 92.943 By MS/MS 8 0 1 1 522650 522650 0 11614 2295 12359 29294 23371 23371 1 6598.4 0 RILELDQFK KNIYVLQELDNPGAKRILELDQFKGQQGQK DNPGAKRILELDQFKGQQGQKRFQDMMGHG K R I F K G 0 1 0 1 0 1 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 1 1160.6554 P12956 P12956 115 123 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.046168 94.309 By MS/MS 5.5 0.5 1 1 2 1635800 1635800 0 11615 596 12360 29295;29296 23372 23372 1 14318 0 RIPWTAASSQLK AALRRSINQPVAFVRRIPWTAASSQLKEHF FVRRIPWTAASSQLKEHFAQFGHVRRCILP R R I L K E 2 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 1 0 0 0 0 12 1 1356.7514 Q9GZT3 Q9GZT3 25 36 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.0010097 119.34 By MS/MS 10 0 1 1 1153700 1153700 0 11616 2398 12361 29297 23373 23373 1 62181 0 RIQEIIEQLDVTTSEYEKEK AMLLKGKGDKAQIEKRIQEIIEQLDVTTSE IEQLDVTTSEYEKEKLNERLAKLSDGVAVL K R I E K L 0 1 0 1 0 2 5 0 0 3 1 2 0 0 0 1 2 0 1 1 0 0 20 2 2450.254 P10809 P10809 370 389 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 5.0444E-06 185.23 By MS/MS 6 0 1 1 944200 944200 0 11617 569 12362 29298 23374 23374 1 6490.7 0 RISAISVAER GPPEKVANIICTQPRRISAISVAERVAKER CTQPRRISAISVAERVAKERAERVGLTVGY R R I E R V 2 2 0 0 0 0 1 0 0 2 0 0 0 0 0 2 0 0 0 1 0 0 10 1 1100.6302 Q6P158;Q9H2U1 Q6P158 603 612 DHX57;DHX36 Putative ATP-dependent RNA helicase DHX57;ATP-dependent RNA helicase DHX36 no no 2 0.034095 94.409 By MS/MS 3.5 0.5 1 1 2 1454000 1454000 0 11618 1697;2432 12363 29299;29300 23375 23375 1 96360 0 RISAVSVAQR EGRGARCNVIITQPRRISAVSVAQRVSHEL ITQPRRISAVSVAQRVSHELGPSLRRNVGF R R I Q R V 2 2 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 10 1 1085.6305 Q7L2E3 Q7L2E3 493 502 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0071936 112.11 By MS/MS 4 0.816 1 1 1 3 4531800 4531800 0 11619 1761 12364 29301;29302;29303 23376;23377 23376 2 151480 0 RISISTSGGSFR GGYGSRSLYNLGGSKRISISTSGGSFRNRF GSKRISISTSGGSFRNRFGAGAGGGYGFGG K R I F R N 0 2 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 12 1 1266.668 CON__P13647;P13647 CON__P13647 73 84 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.0011901 172.61 By matching By MS/MS 2.5 1.12 1 1 1 1 1 3 1360400 705410 655000 + 11620 52 12365 29304;29305;29306;29307 23378 23378 1 66384 246270 RIVAVTGAEAQK AFVIVTEEAIAKGIRRIVAVTGAEAQKALR GIRRIVAVTGAEAQKALRKAESLKKCLSVM R R I Q K A 3 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 12 1 1241.7092 P49588 P49588 751 762 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.002154 126.71 By MS/MS 4 0 1 1 421630 421630 0 11621 951 12366 29308 23379 23379 1 39678 0 RKEAELR KERLTEELKEQMKAKRKEAELRQVQSQAHG LKEQMKAKRKEAELRQVQSQAHGLQMRLKY K R K L R Q 1 2 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 2 900.51411 Q14683;P33121 Q14683 693 699 SMC1A;ACSL1 Structural maintenance of chromosomes protein 1A;Long-chain-fatty-acid--CoA ligase 1 no no 3 0.0091269 128.61 By MS/MS 2 0.816 1 1 1 3 2236800 2236800 0 11622 1451;799 12367 29309;29310;29311 23380 23380 1 555440 0 RKEEEVQQQK QEKERKKREERERKRRKEEEVQQQKLAEER RERKRRKEEEVQQQKLAEERRRQNLQEEKE R R K Q K L 0 1 0 0 0 3 3 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 10 2 1300.6735 Q96CS3 Q96CS3 320 329 FAF2 FAS-associated factor 2 yes yes 2;3 1.2265E-06 185.6 By MS/MS 6.5 0.5 2 2 4 5517600 5517600 0 11623 2126 12368 29312;29313;29314;29315 23381;23382;23383;23384 23382 4 64614 0 RKEEVYK QELHQSVRAAAEEARRKEEVYKQLMSELET RAAAEEARRKEEVYKQLMSELETLPRDVSR R R K Y K Q 0 1 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 7 2 950.51853 O60826 O60826 469 475 CCDC22 Coiled-coil domain-containing protein 22 yes yes 3 0.049991 95.531 By MS/MS 5 0 1 1 270250 270250 0 11624 280 12369 29316 23385 23385 1 2710.5 0 RKESTDEILGR CLLGDFVTEFFKICRRKESTDEILGRSAFE KICRRKESTDEILGRSAFEEEGKETADITH R R K G R S 0 2 0 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 2 1302.6892 Q15042 Q15042 337 347 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 3 0.00040708 160.18 By MS/MS 3.5 0.5 1 1 2 854270 854270 0 11625 1479 12370 29317;29318 23386 23386 1 25810 0 RKEYDALK RELRKREKAEEKERRRKEYDALKAAKREQE AEEKERRRKEYDALKAAKREQEKKPKKEAN R R K L K A 1 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 8 2 1021.5556 Q96AG4 Q96AG4 200 207 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 3 0.0066646 113.18 By MS/MS 7.5 0.5 1 1 2 1852300 1852300 0 11626 2107 12371 29319;29320 23387 23387 1 28198 0 RKFVADGIFK ______________________________ QISKKRKFVADGIFKAELNEFLTRELAEDG K R K F K A 1 1 0 1 0 0 0 1 0 1 0 2 0 2 0 0 0 0 0 1 0 0 10 2 1179.6764 P23396 P23396 9 18 RPS3 40S ribosomal protein S3 yes yes 3 0.033464 100.69 By MS/MS 8 0 1 1 673270 673270 0 11627 703 12372 29321 23388 23388 1 8500 0 RKGDEVDGVDEVAK EALKKQLPGVKSEGKRKGDEVDGVDEVAKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK K R K A K K 1 1 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 14 2 1515.7529 P09874 P09874 208 221 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.00037848 145.49 By MS/MS 4 0.816 1 1 1 3 3132800 3132800 0 11628 543 12373 29322;29323;29324 23389;23390;23391 23391 3 216440 0 RKIAFAITAIK FQHILRVLNTNIDGRRKIAFAITAIKGVGR IDGRRKIAFAITAIKGVGRRYAHVVLRKAD R R K I K G 3 1 0 0 0 0 0 0 0 3 0 2 0 1 0 0 1 0 0 0 0 0 11 2 1230.7812 P62269 P62269 24 34 RPS18 40S ribosomal protein S18 yes yes 3 0.024852 80.871 By MS/MS 9 0 1 1 560850 560850 0 11629 1149 12374 29325 23392 23392 1 11038 0 RKLEEQAR AQRMAKERQEQEEARRKLEEQARAKTQTPP QEQEEARRKLEEQARAKTQTPPVSPAPQPT R R K A R A 1 2 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1028.5727 Q14247 Q14247 389 396 CTTN Src substrate cortactin yes yes 3 0.0035345 131.06 By MS/MS By matching 3.17 1.34 1 1 1 2 1 2 4 1845800 425830 1420000 11630 1435 12375 29326;29327;29328;29329;29330;29331 23393 23393 1 12180 369480 RKNPAAYENDK YLIYTWGTEEFERSKRKNPAAYENDK____ ERSKRKNPAAYENDK_______________ K R K D K - 2 1 2 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 11 2 1304.6473 O14949 O14949 72 82 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 2 0.0018622 139.15 By MS/MS 10 0 1 1 148520 148520 0 11631 147 12376 29332 23394 23394 1 8004.6 0 RKPEDVLDDDDAGSAPLK EVLVLVTIIFIYEKRRKPEDVLDDDDAGSA EDVLDDDDAGSAPLKSSGQHQNDKGKNVRQ R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 P35613 P35613 349 366 BSG Basigin yes yes 3 0.00025261 159.04 By MS/MS 8 1.41 1 1 1 1 1 5 6679100 6679100 0 11632 828 12377 29333;29334;29335;29336;29337 23395;23396;23397 23395 3 94165 0 RKQDVVNR RARMVAAANEIAKERRKQDVVNRVATHSSN NEIAKERRKQDVVNRVATHSSNIRSTFKPV R R K N R V 0 2 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 8 2 1013.573 Q8IWC1 Q8IWC1 35 42 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.0083667 122.19 By MS/MS 3 0 1 1 0 0 0 11633 1866 12378 29338 23398 23398 1 0 0 RKQEEEER KEEEERRMKLEMEAKRKQEEEERKKREDDE KLEMEAKRKQEEEERKKREDDEKRIQAEVE K R K E R K 0 2 0 0 0 1 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 2 1102.5367 Q9UM54 Q9UM54 964 971 MYO6 Unconventional myosin-VI yes yes 2 0.0029032 161.02 By MS/MS 2 0 1 1 36795 36795 0 11634 2781 12379 29339 23399 23399 1 12446 0 RKQEELLR ALRRLEERRREEEERRKQEELLRKQEEEAA RREEEERRKQEELLRKQEEEAAKWAREEEE R R K L R K 0 2 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 2 1070.6196 Q6Y7W6 Q6Y7W6 834 841 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 1.6053E-05 172.25 By MS/MS 2.5 0.5 1 1 2 336460 336460 0 11635 1738 12380 29340;29341 23400;23401 23401 2 113800 0 RKSDGIYIINLK GGTNLDFQMEQYIYKRKSDGIYIINLKRTW IYKRKSDGIYIINLKRTWEKLLLAARAIVA K R K L K R 0 1 1 1 0 0 0 1 0 3 1 2 0 0 0 1 0 0 1 0 0 0 12 2 1418.8245 P08865 P08865 41 52 RPSA 40S ribosomal protein SA yes yes 3 0.020032 89.43 By MS/MS 7 0 1 1 2798400 2798400 0 11636 529 12381 29342 23402 23402 1 43930 0 RKTLSEETR EQLKSEQIRAQAEERRKTLSEETRQHQARA AQAEERRKTLSEETRQHQARAQYQDKLARQ R R K T R Q 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 9 2 1118.6044 Q9NVI7;Q5T9A4 Q5T9A4 116 124 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2;3 9.5556E-10 219.72 By MS/MS 5.5 0.5 2 2 4 1470000 1470000 0 11637 2598;1638 12382 29343;29344;29345;29346 23403;23404;23405 23404 2 13145 0 RKVCGDSDK RKFIEDRVKKIIELKRKVCGDSDKGFVVIN KIIELKRKVCGDSDKGFVVINQKGIDPFSL K R K D K G 0 1 0 2 1 0 0 1 0 0 0 2 0 0 0 1 0 0 0 1 0 0 9 2 1063.508 P40227 P40227 279 287 CCT6A T-complex protein 1 subunit zeta yes yes 2 2.3848E-05 180.45 By MS/MS 6.5 0.5 1 1 2 240080 240080 0 11638 858 12383 29347;29348 23406;23407 23407 2 2289.1 0 RKVDWLTEK ETLTITQAVIFINTRRKVDWLTEKMHARDF IFINTRRKVDWLTEKMHARDFTVSAMHGDM R R K E K M 0 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 9 2 1173.6506 P60842;Q14240;P38919 P60842 283 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2;3 0.0015688 152.06 By MS/MS 5.47 2.33 1 1 2 2 2 3 2 2 2 17 561970000 561970000 0 11639 1097;851 12384 29349;29350;29351;29352;29353;29354;29355;29356;29357;29358;29359;29360;29361;29362;29363;29364;29365 23408;23409;23410;23411;23412;23413;23414;23415;23416;23417;23418;23419;23420 23411 13 4550700 0 RKYDTPK LPSIGIPLLLWYSSKRKYDTPKTKKN____ LLLWYSSKRKYDTPKTKKN___________ K R K P K T 0 1 0 1 0 0 0 0 0 0 0 2 0 0 1 0 1 0 1 0 0 0 7 2 906.49232 P43308 P43308 173 179 SSR2 Translocon-associated protein subunit beta yes yes 3 0.010413 134.81 By MS/MS 8.5 0.5 1 1 2 1554000 1554000 0 11640 896 12385 29366;29367 23421;23422 23422 2 29468 0 RKYELGR KRRKTGGKRKPYHKKRKYELGRPAANTKIG KRKPYHKKRKYELGRPAANTKIGPRRIHTV K R K G R P 0 2 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 2 920.5192 P62241 P62241 25 31 RPS8 40S ribosomal protein S8 yes yes 3 0.025996 104.37 By MS/MS 8 0 1 1 898590 898590 0 11641 1143 12386 29368 23423 23423 1 11345 0 RLAEIQELHQSVR HLRKLQDCRELESSRRLAEIQELHQSVRAA SRRLAEIQELHQSVRAAAEEARRKEEVYKQ R R L V R A 1 2 0 0 0 2 2 0 1 1 2 0 0 0 0 1 0 0 0 1 0 0 13 1 1577.8638 O60826 O60826 449 461 CCDC22 Coiled-coil domain-containing protein 22 yes yes 3 0.0010225 117.2 By MS/MS 5 0 1 1 1318500 1318500 0 11642 280 12387 29369 23424 23424 1 13224 0 RLASTSDIEEKENR SKGTRLAYVAPTIPRRLASTSDIEEKENRD RRLASTSDIEEKENRDSSSLRTSSSYTRRK R R L N R D 1 2 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 14 2 1646.8224 O14974 O14974 504 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 3 0.035505 76.01 By MS/MS 3 0 1 1 484570 484570 0 11643 151 12388 29370 23425 23425 1 8866.3 0 RLDDNIR ANIDEVVNKIRLKIRRLDDNIRTVVRGQTN NKIRLKIRRLDDNIRTVVRGQTNVGQDGRQ R R L I R T 0 2 1 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 1 900.47773 Q5VIR6 Q5VIR6 74 80 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.033751 135.77 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 12086000 12086000 0 11644 1644 12389 29371;29372;29373;29374;29375;29376 23426 23426 1 225480 0 RLDDSLLYLR YNPRVQEIQVVKLEKRLDDSLLYLRDALPE VKLEKRLDDSLLYLRDALPEYSTFDVNMKP K R L L R D 0 2 0 2 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 10 1 1262.6983 P49406 P49406 182 191 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2;3 4.4199E-07 218.94 By MS/MS 8.33 0.471 2 1 3 6116200 6116200 0 11645 948 12390 29377;29378;29379 23427;23428 23427 2 77967 0 RLDDVSNDVR TDPEKLIRIYPELLKRLDDVSNDVRMAAAS PELLKRLDDVSNDVRMAAASTLVTWLQCVK K R L V R M 0 2 1 3 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 1 1187.5895 Q86Y56 Q86Y56 751 760 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.020649 103.26 By MS/MS 4 0 1 1 1172200 1172200 0 11646 1850 12391 29380 23429 23429 1 110310 0 RLDECEEAFQGTK TNSHDGLDGPTYKKRRLDECEEAFQGTKVF KRRLDECEEAFQGTKVFVMPNGMLKSNQQL R R L T K V 1 1 0 1 1 1 3 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 1 1581.7093 P61289 P61289 88 100 PSME3 Proteasome activator complex subunit 3 yes yes 3 0.0021883 116.51 By MS/MS 8 0 1 1 0 0 0 11647 1120 12392 29381 23430 23430 1 0 0 RLDEEEEDNEGGEWERVR KREDKAKKKHDRKSKRLDEEEEDNEGGEWE EEEEDNEGGEWERVRGGVPLVKEKPKMFAK K R L V R G 0 3 1 2 0 0 7 2 0 0 1 0 0 0 0 0 0 1 0 1 0 0 18 2 2245.9836 Q99613 Q99613 288 305 EIF3C Eukaryotic translation initiation factor 3 subunit C yes yes 3 7.6006E-05 182.91 By MS/MS 5 0.816 1 1 1 3 6597200 6597200 0 11648 2252 12393 29382;29383;29384 23431;23432 23431 2 480630 0 RLDEELEDAEK DLLNKMKKANEDELKRLDEELEDAEKNLGE DELKRLDEELEDAEKNLGESEIRDAMMAKA K R L E K N 1 1 0 2 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 1 1345.6361 Q15008 Q15008 83 93 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00027766 153.54 By MS/MS 7 0 1 1 2249500 2249500 0 11649 1471 12394 29385 23433 23433 1 35313 0 RLDEYTQEEIDAFPR KNLVEELPQPRKIPKRLDEYTQEEIDAFPR RLDEYTQEEIDAFPRLWTPPEDYRL_____ K R L P R L 1 2 0 2 0 1 3 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 15 1 1880.8905 Q9BYD1 Q9BYD1 154 168 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2;3 6.1952E-05 216.88 By MS/MS 9 0 2 2 1265400 1265400 0 11650 2368 12395 29386;29387 23434;23435;23436 23434 3 24902 0 RLDQCPESPLQR PHVEPRPLPSFCPPRRLDQCPESPLQRCPP PPRRLDQCPESPLQRCPPPAPRPRLRPEPC R R L Q R C 0 2 0 1 1 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 12 1 1497.7358 Q5T749 Q5T749 387 398 KPRP Keratinocyte proline-rich protein yes yes 2;3 1.7964E-08 199.33 By MS/MS By MS/MS 5.32 3.11 3 1 2 3 2 1 2 1 4 5 14 7039200 1094000 5945100 11651 1636 12396 29388;29389;29390;29391;29392;29393;29394;29395;29396;29397;29398;29399;29400;29401;29402;29403;29404;29405;29406 23437;23438;23439;23440;23441;23442;23443;23444;23445;23446;23447;23448;23449;23450;23451;23452;23453;23454;23455 23437 19 77718 4807600 RLDYITAEIK LVKQELGEARATVGKRLDYITAEIKRYESQ ATVGKRLDYITAEIKRYESQLRDLERQSEQ K R L I K R 1 1 0 1 0 0 1 0 0 2 1 1 0 0 0 0 1 0 1 0 0 0 10 1 1220.6765 O15212 O15212 79 88 PFDN6 Prefoldin subunit 6 yes yes 2 0.006276 112.71 By MS/MS 10 0 1 1 684620 684620 0 11652 170 12397 29407 23456 23456 1 36899 0 RLEAEQAR RVAEERTTRREEESRRLEAEQAREKEEQLQ RREEESRRLEAEQAREKEEQLQRQAEERAL R R L A R E 2 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 971.51484 Q14244 Q14244 533 540 MAP7 Ensconsin yes yes 2 0.0066583 143.73 By MS/MS By matching 4 0 2 1 1 1700800 1661800 39022 11653 1434 12398 29408;29409 23457 23457 1 156390 83143 RLEAFEHPNVVR GGLPISTVREVALLRRLEAFEHPNVVRLMD LLRRLEAFEHPNVVRLMDVCATSRTDREIK R R L V R L 1 2 1 0 0 0 2 0 1 0 1 0 0 1 1 0 0 0 0 2 0 0 12 1 1465.779 P11802 P11802 62 73 CDK4 Cyclin-dependent kinase 4 yes yes 3 0.0030011 105.36 By MS/MS 8 0 1 1 2486000 2486000 0 11654 584 12399 29410 23458 23458 1 31385 0 RLECLKEDVQR TFEELKKHEDSAIPRRLECLKEDVQRQQER AIPRRLECLKEDVQRQQEREKELQHRYADL R R L Q R Q 0 2 0 1 1 1 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 2 1444.7456 Q99459 Q99459 766 776 CDC5L Cell division cycle 5-like protein yes yes 3 0.043166 80.17 By MS/MS 4.5 0.5 1 1 2 1967100 1967100 0 11655 2245 12400 29411;29412 23459 23459 1 145310 0 RLEEAALRR EKERIMNEEDPEKQRRLEEAALRREQKKLE DPEKQRRLEEAALRREQKKLEKKQMKMKQI R R L R R E 2 3 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 2 1112.6414 Q96A33 Q96A33 455 463 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 0.040919 76.827 By MS/MS 6 0 1 1 4234000 4234000 0 11656 2101 12401 29413 23460 23460 1 29105 0 RLEEIPLIK LKNQEKKIDYFERAKRLEEIPLIKSAYEEQ YFERAKRLEEIPLIKSAYEEQRIKDMDLWE K R L I K S 0 1 0 0 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 0 0 0 9 1 1109.6808 Q14152 Q14152 703 711 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0085702 114.89 By MS/MS 3 1.41 1 1 1 1 1 5 52148000 52148000 0 11657 1422 12402 29414;29415;29416;29417;29418 23461;23462 23461 2 2453700 0 RLEESDVLQEAR KEMKESIKKFRDEARRLEESDVLQEARRKY EARRLEESDVLQEARRKYKTIESETVRTSE R R L A R R 1 2 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 12 1 1443.7318 O43615 O43615 90 101 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 1.6938E-10 247.3 By MS/MS 7.5 0.5 2 2 4 35537000 35537000 0 11658 221 12403 29419;29420;29421;29422 23463;23464;23465;23466 23463 4 547450 0 RLEESDVLQEARR KEMKESIKKFRDEARRLEESDVLQEARRKY ARRLEESDVLQEARRKYKTIESETVRTSEV R R L R R K 1 3 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 13 2 1599.8329 O43615 O43615 90 102 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.01729 84.734 By MS/MS 7.5 0.5 1 1 2 4605100 4605100 0 11659 221 12404 29423;29424 23467 23467 1 71204 0 RLEEVLAIR KNEKYFPETLDKLGKRLEEVLAIRTIHEKF LDKLGKRLEEVLAIRTIHEKFLYFLPASEE K R L I R T 1 2 0 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 1 1097.6557 Q8NCM8 Q8NCM8 330 338 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.045423 94.692 By MS/MS 1.5 0.5 1 1 2 381150 381150 0 11660 1952 12405 29425;29426 23468 23468 1 114430 0 RLEEWLGR QSSQHLFLDLPKLEKRLEEWLGRTLPGSDW DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT K R L G R T 0 2 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 8 1 1057.5669 P56192 P56192 460 467 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.013019 131.03 By MS/MS 5.5 1.12 1 1 1 1 4 5105700 5105700 0 11661 1067 12406 29427;29428;29429;29430 23469 23469 1 376310 0 RLEIEHSVPK KAIETFSGKVELQGKRLEIEHSVPKKQRSR ELQGKRLEIEHSVPKKQRSRKIQIRNIPPQ K R L P K K 0 1 0 0 0 0 2 0 1 1 1 1 0 0 1 1 0 0 0 1 0 0 10 1 1206.6721 Q9NZI8 Q9NZI8 67 76 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.031094 74.533 By MS/MS 5 0 1 1 1524700 1524700 0 11662 2649 12407 29431 23470 23470 1 15292 0 RLESSGAGGR RETSRFRQQRPLEFRRLESSGAGGRRAEGP PLEFRRLESSGAGGRRAEGPPRLAIQGPED R R L G R R 1 2 0 0 0 0 1 3 0 0 1 0 0 0 0 2 0 0 0 0 0 0 10 1 988.50501 Q15773 Q15773 213 222 MLF2 Myeloid leukemia factor 2 yes yes 2 2.4278E-07 195.57 By MS/MS 8 0 1 1 1486700 1486700 0 11663 1531 12408 29432 23471 23471 1 18770 0 RLETSISSCK ASSYDTAWKKHDLVRRLETSISSCKTSLQR HDLVRRLETSISSCKTSLQRVQLHIAMFQW R R L C K T 0 1 0 0 1 0 1 0 0 1 1 1 0 0 0 3 1 0 0 0 0 0 10 1 1179.5918 Q96Q15 Q96Q15 3178 3187 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.0071936 112.11 By MS/MS 1.5 0.5 1 1 2 416300 416300 0 11664 2213 12409 29433;29434 23472 23472 1 122790 0 RLFEGNALLR KAARELLTLDEKDPRRLFEGNALLRRLVRI EKDPRRLFEGNALLRRLVRIGVLDEGKMKL R R L L R R 1 2 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 10 1 1187.6775 P46781 P46781 70 79 RPS9 40S ribosomal protein S9 yes yes 2;3 5.2874E-05 173.37 By MS/MS 8.5 0.5 2 2 4 31807000 31807000 0 11665 918 12410 29435;29436;29437;29438 23473;23474;23475 23474 3 608200 0 RLFEQNVQR DPLNKEAAEVLQNNRRLFEQNVQRSMRGGY VLQNNRRLFEQNVQRSMRGGYIGSTYFERC R R L Q R S 0 2 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 1 1188.6364 P61081 P61081 158 166 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.0025209 131.62 By MS/MS 9 0 1 1 589970 589970 0 11666 1108 12411 29439 23476 23476 1 11611 0 RLGDKHATLQK DAVRNQRKLLASLVKRLGDKHATLQKSTKE SLVKRLGDKHATLQKSTKEVRSSIRQVSDV K R L Q K S 1 1 0 1 0 1 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 11 2 1265.7204 Q13263 Q13263 262 272 TRIM28 Transcription intermediary factor 1-beta yes yes 4 0.048667 54.343 By MS/MS 4 0 1 1 328230 328230 0 11667 1367 12412 29440 23477 23477 1 30889 0 RLGDSSLSR ELEIEERERRREEERRLGDSSLSRKDSRWG RREEERRLGDSSLSRKDSRWGDRDSEGTWR R R L S R K 0 2 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 9 1 989.52541 Q14152 Q14152 877 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0085702 119.75 By MS/MS By MS/MS 2.67 1.11 1 2 1 2 3 3 9230800 8450800 779970 11668 1422 12413 29441;29442;29443;29444;29445;29446 23478;23479;23480;23481 23481 4 1279000 355320 RLGEWDLPEAVQR EQSKRTVNIRTRDNRRLGEWDLPEAVQRLV NRRLGEWDLPEAVQRLVELQNTRVPNAEEI R R L Q R L 1 2 0 1 0 1 2 1 0 0 2 0 0 0 1 0 0 1 0 1 0 0 13 1 1567.8107 Q9BW92 Q9BW92 690 702 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2;3 0.0035811 136.27 By MS/MS 5 0 2 2 2202200 2202200 0 11669 2346 12414 29447;29448 23482;23483 23483 2 22087 0 RLGLPGDEVDNKVK QRAPLKSVGPDFGKKRLGLPGDEVDNKVKG KRLGLPGDEVDNKVKGAAGRTDLLRLRRRF K R L V K G 0 1 1 2 0 0 1 2 0 0 2 2 0 0 1 0 0 0 0 2 0 0 14 2 1538.8417 P78527 P78527 2704 2717 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.028713 100.4 By MS/MS 2 0 1 1 473790 473790 0 11670 1225 12415 29449 23484 23484 1 160260 0 RLHGLDEEAEQK KTHIDVIHYRKTDAKRLHGLDEEAEQKLFS DAKRLHGLDEEAEQKLFSEKRVELLKELSR K R L Q K L 1 1 0 1 0 1 3 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1423.7056 P33991 P33991 428 439 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0062559 113.95 By MS/MS 4.5 0.5 1 1 2 1117700 1117700 0 11671 806 12416 29450;29451 23485 23485 1 84557 0 RLIDLHSPSEIVK EGSKTWDRFQMRIHKRLIDLHSPSEIVKQI HKRLIDLHSPSEIVKQITSISIEPGVEVEV K R L V K Q 0 1 0 1 0 0 1 0 1 2 2 1 0 0 1 2 0 0 0 1 0 0 13 1 1505.8566 P60866 P60866 87 99 RPS20 40S ribosomal protein S20 yes yes 3 0.035055 68.033 By MS/MS 10 0 1 1 1103900 1103900 0 11672 1098 12417 29452 23486 23486 1 59495 0 RLLAFAEAR RLSVSRWHRRRGVGRRLLAFAEARARAWAG RRGVGRRLLAFAEARARAWAGGMGEPRARL R R L A R A 3 2 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 1 1045.6033 Q8WUY8 Q8WUY8 142 150 NAT14 N-acetyltransferase 14 yes yes 2 0.036765 99.136 By MS/MS 9 0 1 1 1836500 1836500 0 11673 2020 12418 29453 23487 23487 1 36143 0 RLLEGEDAHLSSSQFSSGSQSSR LDVKTRLEQEIATYRRLLEGEDAHLSSSQF HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R R L S R D 1 2 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 23 1 2464.1579 CON__P02533;P02533;CON__Q61782 CON__P02533 417 439 KRT14 Keratin, type I cytoskeletal 14 yes no 3 1.6006E-08 140.88 By MS/MS 3 0 1 1 416600 0 416600 + 11674 39 12419 29454 23488 23488 1 0 53027 RLLELGPKPEVAQQTR FFKLKNFKTAATFARRLLELGPKPEVAQQT LLELGPKPEVAQQTRKILSACEKNPTDAYQ R R L T R K 1 2 0 0 0 2 2 1 0 0 3 1 0 0 2 0 1 0 0 1 0 0 16 2 1834.0425 P53621 P53621 1127 1142 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0041036 102.38 By MS/MS 6.5 1.12 1 1 1 1 4 4404300 4404300 0 11675 1034 12420 29455;29456;29457;29458 23489 23489 1 40190 0 RLNDFASTVR VPEPKIIDAALRACRRLNDFASTVRILEVV LRACRRLNDFASTVRILEVVKDKAGPHKEI R R L V R I 1 2 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 1 1177.6204 P20674 P20674 98 107 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 0.0020237 131.52 By MS/MS 10 0 1 1 2911400 2911400 0 11676 673 12421 29459 23490 23490 1 156910 0 RLNKHEENLK KPLDLRPKKTRAMRRRLNKHEENLKTKKQQ RAMRRRLNKHEENLKTKKQQRKERLYPLRK R R L L K T 0 1 2 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1279.6997 P42766 P42766 94 103 RPL35 60S ribosomal protein L35 yes yes 2 0.0062409 109.44 By MS/MS 9 0 1 1 0 0 0 11677 888 12422 29460 23491 23491 1 0 0 RLNVTPLAR DGAAALVLMTADAAKRLNVTPLARIVAFAD TADAAKRLNVTPLARIVAFADAAVEPIDFP K R L A R I 1 2 1 0 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 9 1 1038.6298 P24752 P24752 303 311 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.050202 96.034 By MS/MS By matching 7.33 0.471 2 1 2 1 14644000 14578000 66018 11678 716 12423 29461;29462;29463 23492 23492 1 226770 118900 RLPDGIGQLK LVLLTDLLLSQNLLRRLPDGIGQLKQLSIL QNLLRRLPDGIGQLKQLSILKVDQNRLCEV R R L L K Q 0 1 0 1 0 1 0 2 0 1 2 1 0 0 1 0 0 0 0 0 0 0 10 1 1095.64 Q14160 Q14160 257 266 SCRIB Protein scribble homolog yes yes 2 0.028689 97.965 By MS/MS 2 0 1 1 520110 520110 0 11679 1425 12424 29464 23493 23493 1 175920 0 RLPEYPQVDDLLLR KASPSTAGETPSGVKRLPEYPQVDDLLLRR KRLPEYPQVDDLLLRRLVKKPERQQVPTRK K R L L R R 0 2 0 2 0 1 1 0 0 0 4 0 0 0 2 0 0 0 1 1 0 0 14 1 1725.9414 Q9UI10 Q9UI10 143 156 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 2 0.022276 84.687 By MS/MS 6 0 1 1 503850 503850 0 11680 2734 12425 29465 23494 23494 0 3463.6 0 RLPPQQIEK ______________________________ ALDLMRRLPPQQIEKNLSDLIDLVPSLCED R R L E K N 0 1 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 9 1 1107.64 P47756 P47756 15 23 CAPZB F-actin-capping protein subunit beta yes yes 2 0.010899 112.41 By MS/MS 8 0 1 1 890170 890170 0 11681 926 12426 29466 23495 23495 1 11238 0 RLPREMMPR RYMKVYKEEWIPDWRRLPREMMPRNKCKKA WIPDWRRLPREMMPRNKCKKAGPKPKKAKD R R L P R N 0 3 0 0 0 0 1 0 0 0 1 0 2 0 2 0 0 0 0 0 0 0 9 2 1184.6271 O15318 O15318 105 113 POLR3G DNA-directed RNA polymerase III subunit RPC7 yes yes 3 0.050331 52.716 By MS/MS 2 0 1 1 0 0 0 11682 181 12427 29467 23496 23496 93 1 0 0 RLQGEVQR SLDDTEVKKVMEECKRLQGEVQRLREENKQ KVMEECKRLQGEVQRLREENKQFKEEDGLR K R L Q R L 0 2 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 984.54648 O95292 O95292 175 182 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.012241 132.08 By MS/MS 8 0 1 1 429230 429230 0 11683 401 12428 29468 23497 23497 1 5419 0 RLQIEDFEAR IYGHWSIMKWNRERRRLQIEDFEARIALLP NRERRRLQIEDFEARIALLPLLQAETDRRT R R L A R I 1 2 0 1 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1275.6571 Q9P0J0 Q9P0J0 59 68 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2;3 0.00011472 149.33 By MS/MS 10 0 2 2 2697500 2697500 0 11684 2664 12429 29469;29470 23498;23499 23499 2 145380 0 RLQSIGTENTEENRR KGILAADESTGSIAKRLQSIGTENTEENRR RLQSIGTENTEENRRFYRQLLLTADDRVNP K R L R R F 0 3 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 15 2 1801.9031 P04075 P04075 43 57 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.030555 93.716 By MS/MS 7 0 1 1 9849300 9849300 0 11685 467 12430 29471 23500 23500 1 154620 0 RLQSTSER FIQSRGFKTLKSRTRRLQSTSERLAETQNI TLKSRTRRLQSTSERLAETQNIAPSFVKGF R R L E R L 0 2 0 0 0 1 1 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 8 1 975.50976 Q96TA2 Q96TA2 217 224 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.022092 118.74 By MS/MS By matching 6 0 2 1 1 2319300 2305100 14164 11686 2241 12431 29472;29473 23501 23501 1 15846 14514 RLQTQVFK LDYILGLKIEDFLERRLQTQVFKLGLAKSI IEDFLERRLQTQVFKLGLAKSIHHARVLIR R R L F K L 0 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 1 1018.5924 P46781 P46781 109 116 RPS9 40S ribosomal protein S9 yes yes 2 0.0011699 153.04 By MS/MS 9.5 0.5 1 1 2 46553000 46553000 0 11687 918 12432 29474;29475 23502 23502 1 950230 0 RLSEDYGVLK GLGPLNIPLLADVTRRLSEDYGVLKTDEGI ADVTRRLSEDYGVLKTDEGIAYRGLFIIDG R R L L K T 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 10 1 1178.6295 P32119 P32119 110 119 PRDX2 Peroxiredoxin-2 yes yes 2 0.0051811 112.3 By MS/MS 9 0 1 1 1845700 1845700 0 11688 796 12433 29476 23503 23503 1 36323 0 RLSQYPNENLHSAVTK LAASLSTRQLLRISRRLSQYPNENLHSAVT LSQYPNENLHSAVTKACLSRFLPSLARSAL R R L T K A 1 1 2 0 0 1 1 0 1 0 2 1 0 0 1 2 1 0 1 1 0 0 16 1 1855.9541 A3KMH1 A3KMH1 668 683 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 3 0.0034279 152.94 By MS/MS 2 0 1 1 230230 230230 0 11689 14 12434 29477 23504 23504 1 77873 0 RLSTSPDVIQGHQPR SMSPRQRRAQQQSQRRLSTSPDVIQGHQPR RLSTSPDVIQGHQPRDNHTDHGGSAVLIVI R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 0.00036157 152.88 By MS/MS 7 0 1 1 628020 628020 0 11690 2858 12435 29478 23505;23506 23505 2 9858.9 0 RLSYNTASNK ______________________________ LTYRRRLSYNTASNKTRLSRTPGNRIVYLY R R L N K T 1 1 2 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 10 1 1152.5887 P49207 P49207 10 19 RPL34 60S ribosomal protein L34 yes yes 2 0.028575 98.04 By MS/MS 9.5 0.5 1 1 2 5457500 5457500 0 11691 945 12436 29479;29480 23507 23507 1 232570 0 RLTDADAMK VAIGQKRSTVAQLVKRLTDADAMKYTIVVS VAQLVKRLTDADAMKYTIVVSATASDAAPL K R L M K Y 2 1 0 2 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 9 1 1019.507 P25705 P25705 262 270 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.026462 104.42 By MS/MS 6 0 1 1 8449500 8449500 0 11692 723 12437 29481 23508 23508 1 58084 0 RLTEANQR KEEKNEPLSLPELTKRLTEANQRMAKFPES SLPELTKRLTEANQRMAKFPESIKAWPFPD K R L Q R M 1 2 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 1 986.52574 Q8TEQ6 Q8TEQ6 1437 1444 GEMIN5 Gem-associated protein 5 yes yes 2 0.017484 124.98 By MS/MS 3 0 1 1 666750 666750 0 11693 2002 12438 29482 23509 23509 1 12200 0 RLTEEFQNVR LCKTWAGSQSRRLQRRLTEEFQNVRIIKPE RRLQRRLTEEFQNVRIIKPEASRKESSEVY R R L V R I 0 2 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 1 1290.668 Q9UI43 Q9UI43 207 216 FTSJ2 rRNA methyltransferase 2, mitochondrial yes yes 2 0.0010744 139.38 By MS/MS 8 0 1 1 490310 490310 0 11694 2739 12439 29483 23510;23511 23510 2 6190.2 0 RLTEQKGEQQIQK HQKELAAQLNEEAKRRLTEQKGEQQIQKAR KRRLTEQKGEQQIQKARKSNVSYKNPSLMP R R L Q K A 0 1 0 0 0 4 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 13 2 1584.8584 Q9Y5B9 Q9Y5B9 492 504 SUPT16H FACT complex subunit SPT16 yes yes 3 0.0056164 113.69 By MS/MS 2 0.816 1 1 1 3 453320 453320 0 11695 2909 12440 29484;29485;29486 23512 23512 1 75459 0 RLTPQAVK LNEDEREVLINNINRRLTPQAVKIRADIEV LINNINRRLTPQAVKIRADIEVACYGYEGI R R L V K I 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 8 1 911.55525 P05198 P05198 183 190 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.023843 116.37 By MS/MS By matching 7.75 0.829 2 1 1 3 1 10085000 10044000 41581 11696 489 12441 29487;29488;29489;29490 23513 23513 1 157410 74887 RLTVSSLQESGLK SPFVVPVASPSGDARRLTVSSLQESGLKVN ARRLTVSSLQESGLKVNQPASFAVSLNGAK R R L L K V 0 1 0 0 0 1 1 1 0 0 3 1 0 0 0 3 1 0 0 1 0 0 13 1 1416.7936 P21333 P21333 2334 2346 FLNA Filamin-A yes yes 2 0.0015353 136.93 By MS/MS 1.5 0.5 1 1 2 649100 649100 0 11697 677 12442 29491;29492 23514 23514 1 203980 0 RLVNSQGQLR VRGHRVIPAALKAFRRLVNSQGQLRVPVVF LKAFRRLVNSQGQLRVPVVFVTNAGNILQH R R L L R V 0 2 1 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 1 1169.6629 Q9BXW7 Q9BXW7 73 82 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 0.0035372 122.96 By MS/MS 7 0 1 1 1397000 1397000 0 11698 2361 12443 29493 23515 23515 1 21931 0 RLVPGGGATEIELAK VDDGVNTFKVLTRDKRLVPGGGATEIELAK RLVPGGGATEIELAKQITSYGETCPGLEQY K R L A K Q 2 1 0 0 0 0 2 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 15 1 1509.8515 P50990 P50990 407 421 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0018829 136.53 By MS/MS 6 0 1 1 8147400 8147400 0 11699 984 12444 29494 23516 23516 1 56007 0 RMGESDDSILR FNGQFKTYAICGAIRRMGESDDSILRLAKA GAIRRMGESDDSILRLAKADGIVSKNF___ R R M L R L 0 2 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 11 1 1277.6034 P63220 P63220 61 71 RPS21 40S ribosomal protein S21 yes yes 2;3 0.0001142 142.1 By MS/MS 10 0 3 3 2052600 2052600 0 11700 1200 12445;12446 29495;29496;29497 23517;23518;23519 23517 696 3 110630 0 RNDHDDDEDEEVISK TDVMVRCLKLLKEFKRNDHDDDEDEEVISK RNDHDDDEDEEVISKTVPPVDIVFERDMLT K R N S K T 0 1 1 5 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 15 1 1814.7555 Q12789 Q12789 341 355 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 2.336E-08 224.67 By MS/MS 2 0 1 1 423280 423280 0 11701 1328 12447 29498 23520 23520 1 143170 0 RNLADCLR NGYELSPTAAANFTRRNLADCLRSRTPYHV AAANFTRRNLADCLRSRTPYHVNLLLAGYD R R N L R S 1 2 1 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 1016.5185 P49721 P49721 86 93 PSMB2 Proteasome subunit beta type-2 yes yes 2 0.01804 124.23 By MS/MS 9 0.816 1 1 1 3 3373500 3373500 0 11702 957 12448 29499;29500;29501 23521;23522 23522 2 73105 0 RNLDIERPTYTNLNR CAFMVDNEAIYDICRRNLDIERPTYTNLNR RNLDIERPTYTNLNRLISQIVSSITASLRF R R N N R L 0 3 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 15 2 1873.9759 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 215 229 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2;3 0.0005772 161.25 By MS/MS 6.75 0.829 2 1 1 4 69719000 69719000 0 11703 1210;1751;2290;1211 12449 29502;29503;29504;29505 23523;23524;23525;23526 23523 4 509830 0 RNLGSINTELQDVQR FIQKTKKLYIDSCARRNLGSINTELQDVQR RNLGSINTELQDVQRIMVANIEEVLQRGEA R R N Q R I 0 2 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 15 1 1741.9071 O75396 O75396 133 147 SEC22B Vesicle-trafficking protein SEC22b yes yes 3 0.00037386 161.49 By MS/MS 8.5 0.5 1 1 2 2585500 2585500 0 11704 323 12450 29506;29507 23527;23528 23527 2 37977 0 RNLMMEGAASSAGEQLVDLTSR SLASVIISALCTLTRRNLMMEGAASSAGEQ AASSAGEQLVDLTSRDGAWFLEELCSMSGN R R N S R D 3 2 1 1 0 1 2 2 0 0 3 0 2 0 0 3 1 0 0 1 0 0 22 1 2335.126 Q96Q15 Q96Q15 2778 2799 SMG1 Serine/threonine-protein kinase SMG1 yes yes 3 0.049708 43.164 By MS/MS 3 0 1 1 60070 0 60070 11705 2213 12451 29508 23529 23529 0 0 7646 RNPDSPAK RALKAAAAAQKQAKRRNPDSPAKAIPKTLK AQKQAKRRNPDSPAKAIPKTLKDSQ_____ R R N A K A 1 1 1 1 0 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 8 1 883.45118 P82914 P82914 240 247 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.034732 104.06 By MS/MS 9 0 2 2 0 0 0 11706 1235 12452 29509;29510 23530;23531 23530 2 0 0 RNQKPEVR QRAITGASLADIMAKRNQKPEVRKAQREQA LADIMAKRNQKPEVRKAQREQAIRAAKEAK K R N V R K 0 2 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 2 1025.573 P83731 P83731 94 101 RPL24 60S ribosomal protein L24 yes yes 3 0.011653 106.68 By MS/MS 9 0 1 1 2462300 2462300 0 11707 1241 12453 29511 23532 23532 1 48458 0 RNYAHALDGLYR NVRMQNDVKLPQGQRRNYAHALDGLYRVAR GQRRNYAHALDGLYRVAREEGLRRLFSGAT R R N Y R V 2 2 1 1 0 0 0 1 1 0 2 0 0 0 0 0 0 0 2 0 0 0 12 1 1447.732 Q9UBX3 Q9UBX3 139 150 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 3 0.01852 81.494 By MS/MS 8 0 1 1 544530 544530 0 11708 2709 12454 29512 23533 23533 1 6874.6 0 RPAEIYHCR KNKIVYPPQLPGEPRRPAEIYHCRRQIKYS LPGEPRRPAEIYHCRRQIKYSKDKMWYLAK R R P C R R 1 2 0 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0 9 1 1200.5822 Q9NWU5 Q9NWU5 63 71 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.0058052 125.16 By MS/MS 9 0 1 1 1293500 1293500 0 11709 2614 12455 29513 23534 23534 1 25457 0 RPALEPVR KIHLAVTEMASLFPKRPALEPVRSSLRLLN MASLFPKRPALEPVRSSLRLLNASAYRLQS K R P V R S 1 2 0 0 0 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 8 1 936.5505 Q9Y2X7 Q9Y2X7 692 699 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 0.051502 91.9 By MS/MS 4 0 1 1 545350 545350 0 11710 2848 12456 29514 23535 23535 1 51321 0 RPANQFVPR FPHMLFMVHPEYRPKRPANQFVPRLYGFKI PEYRPKRPANQFVPRLYGFKIHPMAYQLQL K R P P R L 1 2 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 9 1 1083.5938 P67870 P67870 178 186 CSNK2B Casein kinase II subunit beta yes yes 2 0.005893 124.83 By MS/MS 8 0 1 1 884470 884470 0 11711 1208 12457 29515 23536 23536 1 11166 0 RPDQQLQGEGK PPVALKKEGIRRVGRRPDQQLQGEGKIIDR RVGRRPDQQLQGEGKIIDRRPERRPPRERR R R P G K I 0 1 0 1 0 3 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 11 1 1254.6317 Q8NC51 Q8NC51 112 122 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 6.6701E-05 164.33 By MS/MS By MS/MS 6.25 0.433 6 2 6 2 29700000 29314000 385980 11712 1946 12458 29516;29517;29518;29519;29520;29521;29522;29523 23537;23538;23539;23540;23541;23542 23539 5 209760 395520 RPEIPTEQSR SGAILSLPKALLDPRRPEIPTEQSREENLI LLDPRRPEIPTEQSREENLIPYSPDVQIHA R R P S R E 0 2 0 0 0 1 2 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 10 1 1211.6258 Q8N766 Q8N766 882 891 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.0030505 125.71 By MS/MS 1.5 0.5 1 1 2 278930 278930 0 11713 1931 12459 29524;29525 23543 23543 1 82261 0 RPELLTHSTTEVTQPR EKIIQVGNRIKFVIKRPELLTHSTTEVTQP PELLTHSTTEVTQPRTNTPVKEDWNVRITK K R P P R T 0 2 0 0 0 1 2 0 1 0 2 0 0 0 2 1 4 0 0 1 0 0 16 1 1863.9803 P78347 P78347 540 555 GTF2I General transcription factor II-I yes yes 3 0.0093083 87.519 By MS/MS 4 0 1 1 684950 684950 0 11714 1221 12460 29526 23544 23544 0 64459 0 RPELNQPAR RPVLVRPGPLLVSARRPELNQPARLTLGRW LLVSARRPELNQPARLTLGRWERAPLASQG R R P A R L 1 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 1 1079.5836 Q9NUL7 Q9NUL7 73 81 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.00017225 171.53 By MS/MS By MS/MS 6 0 2 1 1 5655600 5546200 109370 11715 2582 12461 29527;29528 23545;23546 23546 2 38126 112070 RPEVDGEK DLYIDFGGKFHCVCRRPEVDGEKYQKGTRV KFHCVCRRPEVDGEKYQKGTRVRLRLLDLE R R P E K Y 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 1 928.46141 Q9Y2Q9 Q9Y2Q9 126 133 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.016554 126.24 By MS/MS 8.5 0.5 1 1 2 1817300 1817300 0 11716 2838 12462 29529;29530 23547 23547 1 29546 0 RPEVDGEKYQK DLYIDFGGKFHCVCRRPEVDGEKYQKGTRV CVCRRPEVDGEKYQKGTRVRLRLLDLELTS R R P Q K G 0 1 0 1 0 1 2 1 0 0 0 2 0 0 1 0 0 0 1 1 0 0 11 2 1347.6783 Q9Y2Q9 Q9Y2Q9 126 136 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.039175 80.871 By MS/MS 9.5 0.5 1 1 2 4625800 4625800 0 11717 2838 12463 29531;29532 23548 23548 1 97972 0 RPGANHEGSASR VLTLLCSLVPICVLRRPGANHEGSASRQKA VLRRPGANHEGSASRQKALSLVSCFAGGVF R R P S R Q 2 2 1 0 0 0 1 2 1 0 0 0 0 0 1 2 0 0 0 0 0 0 12 1 1237.5912 Q9NY26 Q9NY26 54 65 SLC39A1 Zinc transporter ZIP1 yes yes 2;3 0.00012554 149.94 By MS/MS 8.5 0.5 2 2 4 816070 816070 0 11718 2631 12464 29533;29534;29535;29536 23549;23550 23550 2 10558 0 RPGAVATGDIGR FKGQPATHGQTKTHRRPGAVATGDIGRVWP THRRPGAVATGDIGRVWPGTKMPGKMGNIY R R P G R V 2 2 0 1 0 0 0 3 0 1 0 0 0 0 1 0 1 0 0 1 0 0 12 1 1168.6313 P09001 P09001 239 250 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.020842 121.6 By MS/MS 7.5 0.5 1 1 2 4444100 4444100 0 11719 531 12465 29537;29538 23551;23552 23551 2 60612 0 RPGYGAYDAFK SLFQRTAWVFDDKYKRPGYGAYDAFKHAVS DKYKRPGYGAYDAFKHAVSDPSILDSLDLN K R P F K H 2 1 0 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 2 0 0 0 11 1 1243.5986 P05198 P05198 144 154 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2;3 0.0019067 130.41 By MS/MS 7.33 0.471 2 1 3 7497100 7497100 0 11720 489 12466 29539;29540;29541 23553;23554 23553 1 116170 0 RPIATAGLHR FLGYCSGLIDNLIRRRPIATAGLHRQLLYI NLIRRRPIATAGLHRQLLYITAFFFAGYYL R R P H R Q 2 2 0 0 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 0 0 0 10 1 1090.636 O95298;E9PQ53 O95298 50 59 NDUFC2;NDUFC2-KCTD14 NADH dehydrogenase [ubiquinone] 1 subunit C2;NADH dehydrogenase [ubiquinone] 1 subunit C2, isoform 2 yes no 3 0.0025447 108.47 By MS/MS 10 0 1 1 355450 355450 0 11721 403 12467 29542 23555 23555 1 19157 0 RPISSCSQR PPRRSEPIYNSRCPRRPISSCSQRRGPKCR NSRCPRRPISSCSQRRGPKCRIEISSPCCP R R P Q R R 0 2 0 0 1 1 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 0 9 1 1089.5349 Q5T749 Q5T749 312 320 KPRP Keratinocyte proline-rich protein yes yes 2 0.00089607 155.58 By MS/MS By MS/MS 2.75 1.56 2 2 2 1 1 5 3 3344300 1356900 1987500 11722 1636 12468 29543;29544;29545;29546;29547;29548;29549;29550 23556;23557;23558;23559;23560 23556 5 214280 996310 RPLNSVVLQQGLADR AVGSEWRPFGYPRRRRPLNSVVLQQGLADR RPLNSVVLQQGLADRIVRDVQEFIDNPKWY R R P D R I 1 2 1 1 0 2 0 1 0 0 3 0 0 0 1 1 0 0 0 2 0 0 15 1 1664.9322 Q9Y276 Q9Y276 186 200 BCS1L Mitochondrial chaperone BCS1 yes yes 3 0.039694 66.059 By MS/MS 7 0 1 1 582890 582890 0 11723 2817 12469 29551 23561 23561 0 9150.4 0 RPNDIYVNMK VEYTLRKRLPSRLPRRPNDIYVNMKTDFKA SRLPRRPNDIYVNMKTDFKAQLARCQKLLD R R P M K T 0 1 2 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 1 1 0 0 10 1 1248.6285 O75817 O75817 33 42 POP7 Ribonuclease P protein subunit p20 yes yes 2 0.020563 89.886 By MS/MS 9 0 1 1 408710 408710 0 11724 347 12470 29552 23562 23562 1 8043.4 0 RPPAAPENTPLVPSGVK QPLPASQTPASNQPKRPPAAPENTPLVPSG PAAPENTPLVPSGVKSWAQASVTHGAHGDG K R P V K S 2 1 1 0 0 0 1 1 0 0 1 1 0 0 5 1 1 0 0 2 0 0 17 1 1728.9523 P48634 P48634 124 140 PRRC2A Protein PRRC2A yes yes 3 0.0018967 107.5 By MS/MS 2 0 1 1 1175700 1175700 0 11725 938 12471 29553 23563 23563 1 397660 0 RPPGVLHCTTK DEPREKMDLVTYFGKRPPGVLHCTTKFCDY YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQ K R P T K F 0 1 0 0 1 0 0 1 1 0 1 1 0 0 2 0 2 0 0 1 0 0 11 1 1264.671 P09543 P09543 245 255 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.0014237 111.63 By MS/MS 7 0 1 1 730740 730740 0 11726 537 12472 29554 23564 23564 1 11471 0 RPQADPALLTPR KLKQDKVRKNKDAVRRPQADPALLTPRSPV AVRRPQADPALLTPRSPVVTIMGHVDHGKT R R P P R S 2 2 0 1 0 1 0 0 0 0 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1333.7466 P46199 P46199 168 179 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 3 0.021309 76.326 By MS/MS 5 0 1 1 0 0 0 11727 910 12473 29555 23565 23565 1 0 0 RPTPQDSPIFLPVDDTSFR GLKKSFYGSTLFLCRRPTPQDSPIFLPVDD QDSPIFLPVDDTSFRWVESLKGILADEDSS R R P F R W 0 2 0 3 0 1 0 0 0 1 1 0 0 2 4 2 2 0 0 1 0 0 19 1 2187.096 P49327 P49327 1405 1423 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.00018259 118.15 By MS/MS 4 1.41 1 1 1 1 1 5 3531200 3531200 0 11728 946 12474 29556;29557;29558;29559;29560 23566;23567;23568;23569 23566 4 620650 0 RPYAPINANAIK RRMCRDLLQPRRAARRPYAPINANAIKAEC AARRPYAPINANAIKAECSIRLPKAAKTPL R R P I K A 3 1 2 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 0 12 1 1326.7408 O94776 O94776 481 492 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0027893 128.6 By MS/MS 5 0 1 1 1561400 1561400 0 11729 365 12475 29561 23570 23570 1 15660 0 RPYEPINSIK VSAGSDRKIKFWDLRRPYEPINSIKRFLST FWDLRRPYEPINSIKRFLSTELAWLLPYNG R R P I K R 0 1 1 0 0 0 1 0 0 2 0 1 0 0 2 1 0 0 1 0 0 0 10 1 1215.6612 Q8WUA4 Q8WUA4 645 654 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 9.603E-05 162.64 By MS/MS 4 0 1 1 1785500 1785500 0 11730 2014 12476 29562 23571 23571 1 168030 0 RQAQQTVR RALVAVLLSRTWHVRRQAQQTVRKLLSSLG SRTWHVRRQAQQTVRKLLSSLGGFKLAHGL R R Q V R K 1 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 8 1 985.54173 Q92616 Q92616 582 589 GCN1L1 Translational activator GCN1 yes yes 2 0.00030365 180.93 By MS/MS 2.5 0.5 1 1 2 384840 384840 0 11731 2064 12477 29563;29564 23572 23572 1 94101 0 RQAVDVSPLR PREDSTRIGRAGTVRRQAVDVSPLRRVNQA AGTVRRQAVDVSPLRRVNQAIWLLCTGARE R R Q L R R 1 2 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 10 1 1139.6411 P46782 P46782 136 145 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.031416 113.18 By MS/MS By matching 9.33 0.471 2 1 2 1 18286000 18135000 151590 11732 919 12478 29565;29566;29567 23573 23573 1 361790 345660 RQAVDVSPLRR PREDSTRIGRAGTVRRQAVDVSPLRRVNQA GTVRRQAVDVSPLRRVNQAIWLLCTGAREA R R Q R R V 1 3 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 2 1295.7422 P46782 P46782 136 146 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 3 0.0058858 98.898 By MS/MS 9 0.707 1 2 1 4 29509000 29509000 0 11733 919 12479 29568;29569;29570;29571 23574;23575 23575 2 582640 0 RQAVTNPNNTFYATK AFTADGERLVGMPAKRQAVTNPNNTFYATK RQAVTNPNNTFYATKRLIGRRYDDPEVQKD K R Q T K R 2 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 0 15 1 1723.8642 P38646 P38646 107 121 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.001725 110.55 By MS/MS 5 0 1 1 7741700 7741700 0 11734 850 12480 29572 23576 23576 1 77645 0 RQAWEVIK ALDCLKSANTEPYYRRQAWEVIKCFLVAMM NTEPYYRRQAWEVIKCFLVAMMSLEDNKHA R R Q I K C 1 1 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 8 1 1028.5767 Q9Y4A5 Q9Y4A5 961 968 TRRAP Transformation/transcription domain-associated protein yes yes 3 0.042751 62.107 By MS/MS 3 0 1 1 0 0 0 11735 2890 12481 29573 23577 23577 1 0 0 RQDLLNVLAR RVCCEGMLIQLRFLKRQDLLNVLARMMRPV LRFLKRQDLLNVLARMMRPVSDQVQIKVTM K R Q A R M 1 2 1 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 1 1196.699 Q96A33 Q96A33 227 236 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 0.00010359 160.75 By MS/MS 6 0 1 1 3436500 3436500 0 11736 2101 12482 29574 23578 23578 1 23623 0 RQEAIAQNR EFIDSQRVWAEYALKRQEAIAQNRRLTLED AEYALKRQEAIAQNRRLTLEDLEDSWDRGI K R Q N R R 2 2 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 1 1084.5738 Q6P2Q9 Q6P2Q9 1393 1401 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0074077 119.21 By MS/MS 2 0.816 1 1 1 3 1525400 1525400 0 11737 1708 12483 29575;29576;29577 23579;23580 23580 2 410980 0 RQEQIAK YAKLLAKRMKEAKEKRQEQIAKRRRLSSLR RMKEAKEKRQEQIAKRRRLSSLRASTSKSE K R Q A K R 1 1 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 7 1 871.48756 P62753 P62753 224 230 RPS6 40S ribosomal protein S6 yes yes 2 0.019692 152.47 By MS/MS 7.5 1.12 1 1 1 1 4 11972000 11972000 0 11738 1169 12484 29578;29579;29580;29581 23581 23581 1 152080 0 RQGQELSAAR EREEREALERERQRRRQGQELSAARQRLQE ERQRRRQGQELSAARQRLQEDEMRRAAEER R R Q A R Q 2 2 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 10 1 1114.5843 Q04323 Q04323 126 135 UBXN1 UBX domain-containing protein 1 yes yes 2 0.018873 104.42 By MS/MS 7 0 1 1 631110 631110 0 11739 1289 12485 29582 23582 23582 1 9907.2 0 RQHEQLR HRKLQARLDQMRKFRRQHEQLRAVIVRVLR LDQMRKFRRQHEQLRAVIVRVLRPQVTAVA R R Q L R A 0 2 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 965.51551 Q14204 Q14204 471 477 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0002363 141.52 By MS/MS 1 0 1 1 0 0 0 11740 1433 12486 29583 23583 23583 1 0 0 RQIEHCEGR DKQETWMLMELQKIRRQIEHCEGRMTLKNL ELQKIRRQIEHCEGRMTLKNLPLADQGSSH R R Q G R M 0 2 0 0 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 9 1 1183.5516 P15924 P15924 677 685 DSP Desmoplakin yes yes 3 0.017024 84.658 By MS/MS 1.5 0.5 1 1 2 147150 147150 0 11741 628 12487 29584;29585 23584;23585 23584 2 49772 0 RQLDSIVGER QNLEPLFEQYINNLRRQLDSIVGERGRLDS INNLRRQLDSIVGERGRLDSELRNMQDLVE R R Q E R G 0 2 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 10 1 1171.6309 CON__P13647;P13647;CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P13647 228 237 KRT5;KRT6A;KRT6C Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 0.00013406 160.36 By MS/MS 3 0 1 1 658200 0 658200 + 11742 52;44;56;40 12488 29586 23586 23586 1 0 83779 RQLPVTR ENYQTMSDTTFKALRRQLPVTRTKIDWNKI DTTFKALRRQLPVTRTKIDWNKILSYKIGK R R Q T R T 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 7 1 868.52428 P47755;P52907 P52907 260 266 CAPZA2;CAPZA1 F-actin-capping protein subunit alpha-2;F-actin-capping protein subunit alpha-1 no no 2 0.036001 134.06 By MS/MS 7 0 1 1 1563200 1563200 0 11743 1025;925 12489 29587 23587 23587 1 24539 0 RQNLQEEKER KEEEVQQQKLAEERRRQNLQEEKERKLECL AEERRRQNLQEEKERKLECLPPEPSPDDPE R R Q E R K 0 2 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 2 1328.6797 Q96CS3 Q96CS3 336 345 FAF2 FAS-associated factor 2 yes yes 3 1.369E-05 181.53 By MS/MS 6.5 0.5 1 1 2 1195000 1195000 0 11744 2126 12490 29588;29589 23588 23588 1 11439 0 RQPAPPR KKKEAKEKGTWVQLKRQPAPPREAHFVRTN KGTWVQLKRQPAPPREAHFVRTNGKEPELL K R Q P R E 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 7 1 820.46677 P46778 P46778 130 136 RPL21 60S ribosomal protein L21 yes yes 2 0.015955 156.93 By MS/MS 9 0 1 1 1615800 1615800 0 11745 916 12491 29590 23589 23589 1 31798 0 RQPIDNVSR VEEYVLDMLRDQLNRRQPIDNVSRNLLRLL RDQLNRRQPIDNVSRNLLRLLTSTCGYKEV R R Q S R N 0 2 1 1 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 9 1 1083.5785 Q8N201 Q8N201 340 348 INTS1 Integrator complex subunit 1 yes yes 2 0.0071127 120.31 By MS/MS 2 0 1 1 258370 258370 0 11746 1907 12492 29591 23590 23590 1 87391 0 RQQENMQR NTSKQQQQKHQYQQRRQQENMQRQSRGEPP KHQYQQRRQQENMQRQSRGEPPLPEEDLSK R R Q Q R Q 0 2 1 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 8 1 1088.5145 O15372 O15372 281 288 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.0029868 143.89 By MS/MS 7.5 0.5 1 1 2 1970400 1970400 0 11747 186 12493 29592;29593 23591 23591 1 30632 0 RQQEQQVPILEK GGVHISGLHTESAPRRQQEQQVPILEKFCF APRRQQEQQVPILEKFCFTPHTEEGCLSER R R Q E K F 0 1 0 0 0 4 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 12 1 1494.8154 P49327 P49327 1105 1116 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0014019 136.81 By MS/MS 2.5 1.12 1 1 1 1 4 9208600 9208600 0 11748 946 12494 29594;29595;29596;29597 23592 23592 1 1969600 0 RQQQAATSESSQSEASVR ADAIIQMVREGQRARRQQQAATSESSQSEA QAATSESSQSEASVRREESPMDVDQPSPSA R R Q V R R 3 2 0 0 0 4 2 0 0 0 0 0 0 0 0 5 1 0 0 1 0 0 18 1 1948.9199 Q7Z6Z7 Q7Z6Z7 3787 3804 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.032072 73.252 By MS/MS 1 0 1 1 0 0 0 11749 1802 12495 29598 23593 23593 1 0 0 RQQQLTAMK QACCRGYLARKAFAKRQQQLTAMKVLQRNC RKAFAKRQQQLTAMKVLQRNCAAYLKLRNW K R Q M K V 1 1 0 0 0 3 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 9 1 1102.5917 P35579 P35579 802 810 MYH9 Myosin-9 no no 2 0.027176 104.06 By MS/MS 2 0 1 1 329220 329220 0 11750 824 12496 29599 23594 23594 1 111360 0 RQQVEALYR YCRLFQTAITRAKEKRQQVEALYRLQGQKE TRAKEKRQQVEALYRLQGQKEPGDQGPAHP K R Q Y R L 1 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 1 1161.6255 Q9Y399 Q9Y399 264 272 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0017121 146.69 By MS/MS 9 0.816 1 1 1 3 3172000 3172000 0 11751 2860 12497 29600;29601;29602 23595 23595 1 49622 0 RQTIEER YLKNSRKEHQRILARRQTIEERKERLESLN EHQRILARRQTIEERKERLESLNIQREKEE R R Q E R K 0 2 0 0 0 1 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 7 1 930.48829 Q14152 Q14152 572 578 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.040983 130.27 By MS/MS 2.5 0.5 1 1 2 19771000 19771000 0 11752 1422 12498 29603;29604 23596;23597 23597 2 825000 0 RQVLKDLVK YLTTAVITNKDVRKRRQVLKDLVKVIQQES KDVRKRRQVLKDLVKVIQQESYTYKDPITE R R Q V K V 0 1 0 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 0 2 0 0 9 2 1097.6921 P60228 P60228 271 279 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 0.0037038 110.38 By MS/MS 6 0 1 1 2501400 2501400 0 11753 1090 12499 29605 23598 23598 1 17195 0 RREDEYR VEKQTSLTPRELEIRRREDEYRFTKLLQIA TPRELEIRRREDEYRFTKLLQIAGISPHGN R R R Y R F 0 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 2 1022.4894 O76031 O76031 230 236 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.028036 161.68 By MS/MS 5.5 0.5 1 1 2 473080 473080 0 11754 360 12500 29606;29607 23599 23599 1 4087.6 0 RREEEGLQLR KSYKNKSLNPDEMRRRREEEGLQLRKQKRE DEMRRRREEEGLQLRKQKREEQLFKRRNVA R R R L R K 0 3 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 2 1284.6898 P52294 P52294 27 36 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 3 0.0057302 114.51 By MS/MS 6 0 1 1 1317600 1317600 0 11755 1014 12501 29608 23600 23600 1 9057.3 0 RREQEEAAAPR LEVLEDTKRALSEKRRREQEEAAAPRGPPQ SEKRRREQEEAAAPRGPPQVTSKATNPFED R R R P R G 3 3 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 11 2 1311.6644 Q8IYI6 Q8IYI6 289 299 EXOC8 Exocyst complex component 8 yes yes 3 0.0055246 103.08 By MS/MS 5 0 1 1 279190 279190 0 11756 1887 12502 29609 23601 23601 1 2800.2 0 RRNPDSPAK RRALKAAAAAQKQAKRRNPDSPAKAIPKTL AQKQAKRRNPDSPAKAIPKTLKDSQ_____ K R R A K A 1 2 1 1 0 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 9 2 1039.5523 P82914 P82914 239 247 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.011151 106.68 By MS/MS 8 0 1 1 0 0 0 11757 1235 12503 29610 23602 23602 1 0 0 RRQQSEISAAVER SKQQVADEDEIWKQRRRQQSEISAAVERAR QRRRQQSEISAAVERARKRREEEERRMEEQ R R R E R A 2 3 0 0 0 2 2 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 13 2 1528.807 Q9Y520 Q9Y520 449 461 PRRC2C Protein PRRC2C yes yes 3 0.041476 68.809 By MS/MS 2 0.816 1 1 1 3 928960 928960 0 11758 2905 12504 29611;29612;29613 23603;23604 23603 1 196790 0 RRVEHHDHAVVSGR VAGDAACFYDIKLGRRRVEHHDHAVVSGRL RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R R R G R L 1 3 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 14 2 1653.856 O95831 O95831 450 463 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.052771 119.88 By MS/MS 5.5 0.5 1 1 2 769830 769830 0 11759 429 12505 29614;29615 23605 23605 1 7142.2 0 RSAVPPGADK PARLTRGEADRDTYRRSAVPPGADKKAEAG RDTYRRSAVPPGADKKAEAGAGSATEFQFR R R S D K K 2 1 0 1 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 10 1 996.53524 P46783 P46783 129 138 RPS10 40S ribosomal protein S10 yes yes 2 0.00054278 149.94 By MS/MS 9.5 0.5 1 1 2 1606000 1606000 0 11760 920 12506 29616;29617 23606 23606 1 33845 0 RSEKDTAAVVSR KPGEDASGPAEDLVRRSEKDTAAVVSRQGS LVRRSEKDTAAVVSRQGSSLNLFEDVQITE R R S S R Q 2 2 0 1 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 2 0 0 12 2 1317.7001 Q6WKZ4 Q6WKZ4 486 497 RAB11FIP1 Rab11 family-interacting protein 1 yes yes 3 0.00049216 133.04 By MS/MS 5 0 1 1 917320 917320 0 11761 1735 12507 29618 23607 23607 1 9200.2 0 RSENEEFVEVGR EFFIILEGSAAVLQRRSENEEFVEVGRLGP LQRRSENEEFVEVGRLGPSDYFGEIALLMN R R S G R L 0 2 1 0 0 0 4 1 0 0 0 0 0 1 0 1 0 0 0 2 0 0 12 1 1449.6848 P10644 P10644 306 317 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 5.7435E-08 207.95 By MS/MS 6.5 0.5 1 1 2 5705000 5705000 0 11762 567 12508 29619;29620 23608 23608 1 45298 0 RSEPIYNSR LRPSEGFPNYCTPPRRSEPIYNSRCPRRPI YCTPPRRSEPIYNSRCPRRPISSCSQRRGP R R S S R C 0 2 1 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1120.5625 Q5T749 Q5T749 300 308 KPRP Keratinocyte proline-rich protein yes yes 2 0.00038337 187.5 By MS/MS By MS/MS 5.61 2.77 1 2 2 2 2 2 2 1 2 2 9 9 38670000 13918000 24752000 11763 1636 12509 29621;29622;29623;29624;29625;29626;29627;29628;29629;29630;29631;29632;29633;29634;29635;29636;29637;29638 23609;23610;23611;23612;23613;23614;23615;23616;23617;23618;23619;23620;23621;23622;23623 23615 15 967720 18915000 RSFSKEVEER DRGDRLDRARTPATKRSFSKEVEERSRERP TPATKRSFSKEVEERSRERPSQPEGLRKAA K R S E R S 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 10 2 1265.6364 Q04637 Q04637 1184 1193 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.0017225 123.62 By MS/MS 2.5 0.5 1 1 2 984460 984460 0 11764 1291 12510 29639;29640 23624 23624 1 258130 0 RSGYAFSHQEGFGELIMSGK AQHRCMRRVGRTGSRRSGYAFSHQEGFGEL FSHQEGFGELIMSGKNMRLSSLALSSFTTR R R S G K N 1 1 0 0 0 1 2 4 1 1 1 1 1 2 0 3 0 0 1 0 0 0 20 1 2200.0371 P98198 P98198 1145 1164 ATP8B2 Phospholipid-transporting ATPase ID yes yes 3 0.046576 50.404 By MS/MS 5 0 1 1 990490 990490 0 11765 1255 12511 29641 23625 23625 752 0 9934.1 0 RSLGEIPIVESEIKK CSTKEDIQSVMTEIRRSLGEIPIVESEIKK RSLGEIPIVESEIKKEAGELKPEEEITVGP R R S K K E 0 1 0 0 0 0 3 1 0 3 1 2 0 0 1 2 0 0 0 1 0 0 15 2 1696.9723 P53618 P53618 481 495 COPB1 Coatomer subunit beta yes yes 3 0.052614 62.237 By MS/MS 4.5 0.5 1 1 2 869370 869370 0 11766 1033 12512 29642;29643 23626 23626 0 47322 0 RSLQAQLQR DCLDRTNVIQSLLARRSLQAQLQRLGVLHV QSLLARRSLQAQLQRLGVLHVGQKLEEQDE R R S Q R L 1 2 0 0 0 3 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 1 1098.6258 Q9NTJ5 Q9NTJ5 406 414 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.020091 107.69 By MS/MS 3 2.16 1 1 1 3 1347400 1347400 0 11767 2576 12513 29644;29645;29646 23627;23628 23627 2 124480 0 RSLTNSHLEK NGQINSKFISDRESRRSLTNSHLEKKKCDE DRESRRSLTNSHLEKKKCDEYIPGTTSLGM R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 Q9H2H9 Q9H2H9 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes yes 3 0.019335 78.548 By MS/MS 1.5 0.5 1 1 2 237850 237850 0 11768 2430 12514 29647;29648 23629 23629 1 70879 0 RSQQGPR PGGELPRGPAGLGPRRSQQGPRKEPRKIIA GPAGLGPRRSQQGPRKEPRKIIATVLMTED R R S P R K 0 2 0 0 0 2 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 7 1 827.4362 Q04637 Q04637 703 709 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.033751 135.77 By MS/MS 2 0 1 1 674670 674670 0 11769 1291 12515 29649 23630 23630 1 228200 0 RSTSSFSCLSR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS R R S S R H 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 0 11 1 1286.6037 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 35 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 1.1565E-12 209.8 By MS/MS By MS/MS 5.48 2.98 4 3 3 3 4 4 2 2 4 4 13 20 35239000 15140000 20099000 + 11770 55 12516 29650;29651;29652;29653;29654;29655;29656;29657;29658;29659;29660;29661;29662;29663;29664;29665;29666;29667;29668;29669;29670;29671;29672;29673;29674;29675;29676;29677;29678;29679;29680;29681;29682 23631;23632;23633;23634;23635;23636;23637;23638;23639;23640;23641;23642;23643;23644;23645;23646;23647;23648;23649;23650;23651;23652;23653;23654;23655;23656;23657;23658 23632 28 1024200 21614000 RSVSDNDIR EIRRDHFEEAMRFARRSVSDNDIRKYEMFA AMRFARRSVSDNDIRKYEMFAQTLQQSRGF R R S I R K 0 2 1 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 9 1 1060.5261 P55072 P55072 745 753 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.043378 95.741 By MS/MS 4 0 1 1 2980700 2980700 0 11771 1054 12517 29683 23659 23659 1 280500 0 RSVTLESK SQCGAAEEEFVQRFRRSVTLESKKQLIEPV EFVQRFRRSVTLESKKQLIEPVQYDEQGMA R R S S K K 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 8 1 918.51345 P82933 P82933 246 253 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.046734 106.68 By MS/MS 7.5 0.5 1 1 2 2417500 2417500 0 11772 1239 12518 29684;29685 23660 23660 1 37536 0 RTAADKDR IKLNKAEKAWKPSSKRTAADKDRGEEDADG AWKPSSKRTAADKDRGEEDADGSKTQDLFR K R T D R G 2 2 0 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 8 2 931.48354 Q04637 Q04637 740 747 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.021214 135.71 By MS/MS 2 0 1 1 136400 136400 0 11773 1291 12519 29686 23661 23661 1 46137 0 RTAAENDFVTLKK LVEDYKKKYEDEINKRTAAENDFVTLKKDV NKRTAAENDFVTLKKDVDNAYMIKVELQSK K R T K K D 2 1 1 1 0 0 1 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 13 2 1491.8045 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 275 287 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.00048792 156.2 By MS/MS 3 0 1 1 1070000 0 1070000 + 11774 55 12520 29687 23662 23662 1 0 136190 RTAEWVAWR LVFIVSQQATYEADRRTAEWVAWRLLGKAG TYEADRRTAEWVAWRLLGKAGVLLLLRDSL R R T W R L 2 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 9 1 1173.6043 Q9P2K2 Q9P2K2 288 296 TXNDC16 Thioredoxin domain-containing protein 16 yes yes 2 0.0058897 122.18 By MS/MS 7 0 1 1 0 0 0 11775 2685 12521 29688 23663 23663 1 0 0 RTAQEVETYRR KFEKNFYQEHPDLARRTAQEVETYRRSKEI DLARRTAQEVETYRRSKEITVRGHNCPKPV R R T R R S 1 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 11 2 1407.7219 P17844 P17844 68 78 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 3 0.041923 93.623 By MS/MS 5 0 1 1 2647000 2647000 0 11776 646 12522 29689 23664 23664 1 26548 0 RTDIFGVEETAIGKK PGLDIESSLKQLAERRTDIFGVEETAIGKK RTDIFGVEETAIGKKIGEEEIQKPEEKVTW R R T K K I 1 1 0 1 0 0 2 2 0 2 0 2 0 1 0 0 2 0 0 1 0 0 15 2 1662.8941 Q15459 Q15459 473 487 SF3A1 Splicing factor 3A subunit 1 yes yes 3 0.0004262 148.7 By MS/MS 4 0 1 1 705900 705900 0 11777 1515 12523 29690 23665 23665 1 66430 0 RTESEMSAR LLEPSPADQLGNGHRRTESEMSARIAKMSL LGNGHRRTESEMSARIAKMSLSPSSPRHED R R T A R I 1 2 0 0 0 0 2 0 0 0 0 0 1 0 0 2 1 0 0 0 0 0 9 1 1065.4873 Q86XL3 Q86XL3 789 797 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0072855 120.31 By MS/MS 4 0 1 1 0 0 0 11778 1845 12524 29691 23666 23666 1 0 0 RTETTVKK MSVVSVETSDDGTTRRTETTVKKVVKTVTT SDDGTTRRTETTVKKVVKTVTTRTVQPVAM R R T K K V 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 3 0 0 1 0 0 8 2 961.55564 O60716 O60716 136 143 CTNND1 Catenin delta-1 yes yes 3 0.0053239 119.75 By MS/MS 4 0 1 1 46225 46225 0 11779 272 12525 29692 23667 23667 1 4350.1 0 RTGAIVDVPVGEELLGR VFGNDKLIKEGDIVKRTGAIVDVPVGEELL GAIVDVPVGEELLGRVVDALGNAIDGKGPI K R T G R V 1 2 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 17 1 1779.9843 P25705 P25705 133 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.00030369 150.39 By MS/MS 6 0 1 1 10643000 10643000 0 11780 723 12526 29693 23668 23668 1 73164 0 RTGKPIAVK LKVGDDVEFEVSSDRRTGKPIAVKLVKIKQ EVSSDRRTGKPIAVKLVKIKQEILPEERMN R R T V K L 1 1 0 0 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 1 0 0 9 2 968.6131 O75534 O75534 78 86 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.046714 73.887 By MS/MS 4.5 0.5 1 1 2 269580 269580 0 11781 333 12527 29694;29695 23669 23669 1 21957 0 RTMREDDPK LFSGGDDAICKVWDRRTMREDDPKPVGALA CKVWDRRTMREDDPKPVGALAGHQDGITFI R R T P K P 0 2 0 2 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 9 2 1146.5452 Q8TEB1 Q8TEB1 338 346 DCAF11 DDB1- and CUL4-associated factor 11 yes yes 2 0.036875 76.478 By MS/MS 8 0 1 1 606650 0 606650 11782 1999 12528 29696 23670 23670 970 0 0 818640 RTNAENEFVTIK MVEDYRNKYEDEINKRTNAENEFVTIKKDV INKRTNAENEFVTIKKDVDGAYMTKVDLQA K R T I K K 1 1 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 12 1 1420.731 CON__P04264;P04264 P04264 277 288 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.019653 113.38 By MS/MS 3 0 1 1 382400 0 382400 + 11783 471;45 12529 29697 23671 23671 1 0 48673 RTNAENEFVTIKK MVEDYRNKYEDEINKRTNAENEFVTIKKDV NKRTNAENEFVTIKKDVDGAYMTKVDLQAK K R T K K D 1 1 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 0 13 2 1548.826 CON__P04264;P04264 P04264 277 289 KRT1 Keratin, type II cytoskeletal 1 no no 3 1.4966E-08 193.11 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 4 3 11659000 4781100 6877600 + 11784 471;45 12530 29698;29699;29700;29701;29702;29703;29704 23672;23673;23674;23675;23676 23674 5 305120 1348600 RTPGRPTSSQSYEQNIK AEHPLQYNYTFWYSRRTPGRPTSSQSYEQN PGRPTSSQSYEQNIKQIGTFASVEQFWRFY R R T I K Q 0 2 1 0 0 2 1 1 0 1 0 1 0 0 2 3 2 0 1 0 0 0 17 2 1947.9763 O60573 O60573 67 83 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 3 0.0041067 100.4 By MS/MS 8 0 1 1 697910 697910 0 11785 265 12531 29705 23677 23677 1 8811 0 RTPVIDADKPVSSQLR DIHYGVKSNSLAFIKRTPVIDADKPVSSQL TPVIDADKPVSSQLRVLTLSEDSPYETLHS K R T L R V 1 2 0 2 0 1 0 0 0 1 1 1 0 0 2 2 1 0 0 2 0 0 16 2 1780.9795 Q14204 Q14204 121 136 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0062908 94.339 By MS/MS 1.5 0.5 1 1 2 1128800 1128800 0 11786 1433 12532 29706;29707 23678 23678 1 326500 0 RTTSSSTRR GGFSSGSAGIINYQRRTTSSSTRRSGGGGG IINYQRRTTSSSTRRSGGGGGRFSSCGGGG R R T R R S 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 9 2 1050.553 CON__P04264;P04264 P04264 30 38 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.035001 88.177 By matching By MS/MS 5.91 3.03 1 1 1 1 1 1 1 1 1 2 1 10 3284300 36894 3247400 + 11787 471;45 12533 29708;29709;29710;29711;29712;29713;29714;29715;29716;29717;29718 23679;23680 23680 2 1988.5 4416800 RTTVVAQLK KNLYSDDIPHALREKRTTVVAQLKQLQAET HALREKRTTVVAQLKQLQAETEPIVKMFED K R T L K Q 1 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 9 1 1014.6186 P60228 P60228 74 82 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0085702 114.89 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 14520000 14451000 68360 11788 1090 12534 29719;29720;29721;29722;29723;29724 23681 23681 1 142950 70050 RTVDLSSHLAK SASSEAPPLINEDVKRTVDLSSHLAKVTAE EDVKRTVDLSSHLAKVTAEVVLAHLGGGST K R T A K V 1 1 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 1 0 0 11 1 1225.6779 P04843 P04843 38 48 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.00087883 115.92 By MS/MS 5 0 1 1 385420 385420 0 11789 478 12535 29725 23682 23682 1 3865.5 0 RTVVDSEGRTETTVTR SVTKITKPDGIVEERRTVVDSEGRTETTVT TVVDSEGRTETTVTRHEADSSPRGDPESPR R R T T R H 0 3 0 1 0 0 2 1 0 0 0 0 0 0 0 1 5 0 0 3 0 0 16 2 1805.9232 O00165 O00165 227 242 HAX1 HCLS1-associated protein X-1 yes yes 3 0.0041646 102.15 By MS/MS 7.5 0.5 1 1 2 6150900 6150900 0 11790 86 12536 29726;29727 23683;23684 23683 2 91321 0 RVCEEIAIIPSKK EKYYTRLGNDFHTNKRVCEEIAIIPSKKLR NKRVCEEIAIIPSKKLRNKIAGYVTHLMKR K R V K K L 1 1 0 0 1 0 2 0 0 3 0 2 0 0 1 1 0 0 0 1 0 0 13 2 1541.8599 P08708 P08708 33 45 RPS17 40S ribosomal protein S17 yes yes 3 0.0068653 94.547 By MS/MS 9.5 0.5 1 1 2 3777500 3777500 0 11791 527 12537 29728;29729 23685;23686 23686 2 113460 0 RVDALNDEIR LGTDLLSQLSLEDQKRVDALNDEIRQLQQE LEDQKRVDALNDEIRQLQQENRQLLNERIK K R V I R Q 1 2 1 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 1 1199.6258 Q9UQE7 Q9UQE7 796 805 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.02857 98.044 By MS/MS 3 0 1 1 362500 362500 0 11792 2807 12538 29730 23687 23687 1 6632.7 0 RVDAVIPPYPR FFSEDKYYRVNLRTRRVDAVIPPYPRSIAQ LRTRRVDAVIPPYPRSIAQYWLGCPVPGQA R R V P R S 1 2 0 1 0 0 0 0 0 1 0 0 0 0 3 0 0 0 1 2 0 0 11 1 1281.7194 CON__Q3ZBS7 CON__Q3ZBS7 459 469 yes yes 2 0.01545 105.2 By MS/MS 10 0 1 1 228600 228600 0 + 11793 66 12539 29731 23688 23688 1 12320 0 RVDQLKSDQSR NLEPYFESFINNLRRRVDQLKSDQSRLDSE NLRRRVDQLKSDQSRLDSELKNMQDMVEDY R R V S R L 0 2 0 2 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 2 1330.6953 CON__P04264;P04264 P04264 241 251 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 2.4256E-19 236.69 By MS/MS By MS/MS 5.33 2.84 3 4 4 3 3 4 3 3 3 3 15 18 76975000 44691000 32284000 + 11794 471;45 12540 29732;29733;29734;29735;29736;29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747;29748;29749;29750;29751;29752;29753;29754;29755;29756;29757;29758;29759;29760;29761;29762;29763;29764 23689;23690;23691;23692;23693;23694;23695;23696;23697;23698;23699;23700;23701;23702;23703;23704;23705;23706;23707;23708;23709;23710;23711;23712;23713;23714;23715 23694 27 3540300 12074000 RVEDEAQGR YFPALHRFILLYQARRVEDEAQGRELVFAL LLYQARRVEDEAQGRELVFALWQQLGAVLK R R V G R E 1 2 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 1 1058.5105 Q562E7 Q562E7 891 899 WDR81 WD repeat-containing protein 81 yes yes 2 0.00858 114.86 By MS/MS By matching 1.33 0.471 2 1 2 1 461820 348620 113190 11795 1593 12541 29765;29766;29767 23716 23716 1 116450 113190 RVEEDIQQQK KRLKNTLTQTTENLRRVEEDIQQQKATGSE TENLRRVEEDIQQQKATGSEVSQRKQQLEV R R V Q K A 0 1 0 1 0 3 2 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 1 1271.647 P15924 P15924 1425 1434 DSP Desmoplakin yes yes 2 6.814E-27 280.2 By MS/MS By MS/MS 2.6 1.02 1 1 2 1 4 1 3450700 2331900 1118800 11796 628 12542 29768;29769;29770;29771;29772 23717;23718;23719;23720;23721 23719 5 473110 142400 RVEHHDHAVVSGR AGDAACFYDIKLGRRRVEHHDHAVVSGRLA RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R R V G R L 1 2 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 13 1 1497.7549 O95831 O95831 451 463 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3;4 1.006E-05 201.38 By MS/MS 5.5 0.5 2 2 4 4996800 4996800 0 11797 429 12543 29773;29774;29775;29776 23722;23723;23724;23725 23723 4 47798 0 RVEHNQSYSQAGITETEWTSGSSK PLKGRAKTPVTLKQRRVEHNQSYSQAGITE QAGITETEWTSGSSKGGPLQALTRESTRGS R R V S K G 1 1 1 0 0 2 3 2 1 1 0 1 0 0 0 5 3 1 1 1 0 0 24 1 2681.2318 P42167 P42167 216 239 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 3 2.9369E-08 133.51 By MS/MS 6 0 1 1 2151100 2151100 0 11798 876 12544 29777 23726 23726 1 14787 0 RVHELER YQLSKLGVSLVLSARRVHELERVKRRCLEN VSLVLSARRVHELERVKRRCLENGNLKEKD R R V E R V 0 2 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 1 937.50936 Q9Y394 Q9Y394 83 89 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 3 0.02854 91.069 By MS/MS 7.5 0.5 1 1 2 1165000 1165000 0 11799 2859 12545 29778;29779 23727 23727 1 17498 0 RVHPALDTYIK TFPYTTILSIWLATRRVHPALDTYIKERKL LATRRVHPALDTYIKERKLCAYPRLEIYQE R R V I K E 1 1 0 1 0 0 0 0 1 1 1 1 0 0 1 0 1 0 1 1 0 0 11 1 1311.7299 Q9Y6I9 Q9Y6I9 150 160 TEX264 Testis-expressed sequence 264 protein yes yes 3 0.049187 64.64 By MS/MS 7 0 1 1 2171800 2171800 0 11800 2945 12546 29780 23728 23728 1 34093 0 RVHVTQEDFEMAVAK KGVCTEAGMYALRERRVHVTQEDFEMAVAK RVHVTQEDFEMAVAKVMQKDSEKNMSIKKL R R V A K V 2 1 0 1 0 1 2 0 1 0 0 1 1 1 0 0 1 0 0 3 0 0 15 1 1758.8723 P62195 P62195 375 389 PSMC5 26S protease regulatory subunit 8 yes yes 3 0.00026281 139.21 By MS/MS 7 0 2 2 3604600 3604600 0 11801 1142 12547;12548 29781;29782 23729;23730 23730 643 2 56586 0 RVLDELTLAR LNLRMSVEADINGLRRVLDELTLARADLEM INGLRRVLDELTLARADLEMQIESLKEELA R R V A R A 1 2 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 1 1184.6877 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779 CON__P02533 223 232 KRT17;KRT14;KRT16 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.0090341 130.41 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 1568200 1300300 267870 + 11802 39;47;57 12549 29783;29784 23731;23732 23731 2 122370 34095 RVLDELTLTK VALRQSVEADINGLRRVLDELTLTKADLEM INGLRRVLDELTLTKADLEMQIESLTEELA R R V T K A 0 1 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 10 1 1186.6921 CON__P13645;P13645 CON__P13645 257 266 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.4462E-05 169.76 By MS/MS By MS/MS 5.38 2.5 1 1 1 1 1 1 1 1 2 6 8354300 4729300 3624900 + 11803 50 12550 29785;29786;29787;29788;29789;29790;29791;29792 23733;23734;23735 23733 3 433490 1194300 RVLLGETGKEK ERAYQKQPTIFQNKKRVLLGETGKEKLPRY QNKKRVLLGETGKEKLPRYYKNIGLGFKTP K R V E K L 0 1 0 0 0 0 2 2 0 0 2 2 0 0 0 0 1 0 0 1 0 0 11 2 1228.7139 P62280 P62280 22 32 RPS11 40S ribosomal protein S11 yes yes 2;3 0.0010272 120.57 By MS/MS 9 0 2 2 2674700 2674700 0 11804 1152 12551 29793;29794 23736;23737 23736 2 52639 0 RVLQALEGLK VMPSHFSRGSKSVARRVLQALEGLKMVEKD KSVARRVLQALEGLKMVEKDQDGGRKLTPQ R R V L K M 1 1 0 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 1 1125.687 P39019 P39019 102 111 RPS19 40S ribosomal protein S19 yes yes 2;3 3.802E-07 163.16 By MS/MS 10 0 2 2 1947300 1947300 0 11805 853 12552 29795;29796 23738;23739 23739 2 104950 0 RVNQAIWLLCTGAR AGTVRRQAVDVSPLRRVNQAIWLLCTGARE RRVNQAIWLLCTGAREAAFRNIKTIAECLA R R V A R E 2 2 1 0 1 1 0 1 0 1 2 0 0 0 0 0 1 1 0 1 0 0 14 1 1656.8882 P46782 P46782 146 159 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2;3 0.016363 134.18 By MS/MS 9 0 3 3 419210 419210 0 11806 919 12553 29797;29798;29799 23740;23741;23742 23741 3 8250.2 0 RVPDHHPC VILRVDNIIKAAPRKRVPDHHPC_______ IKAAPRKRVPDHHPC_______________ K R V P C - 0 1 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 1 0 0 8 1 1016.461 P78371 P78371 528 535 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.006184 111.82 By MS/MS 6 0 2 2 2069100 2069100 0 11807 1222 12554 29800;29801 23743;23744 23743 2 14223 0 RVPDITECK QHAKNRYYYYHRQYRRVPDITECKEEDIMC YHRQYRRVPDITECKEEDIMCMYEAEMQWK R R V C K E 0 1 0 1 1 0 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 9 1 1116.5597 O96000 O96000 64 72 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.037004 99.013 By MS/MS 9 0 1 1 316920 316920 0 11808 436 12555 29802 23745 23745 1 6237 0 RVPPPALSR DDRKDDRVEERDPPRRVPPPALSRDRERDR ERDPPRRVPPPALSRDRERDRDREREGEKE R R V S R D 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 9 1 991.5927 Q14152 Q14152 1329 1337 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.010899 112.41 By MS/MS 6 2.58 1 1 1 1 1 1 1 1 1 9 41513000 41513000 0 11809 1422 12556 29803;29804;29805;29806;29807;29808;29809;29810;29811 23746;23747;23748 23747 3 1255800 0 RVPTAPAATSK INAENKAKINMAGAKRVPTAPAATSKPGLR AGAKRVPTAPAATSKPGLRPRTALGDIGNK K R V S K P 3 1 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 1 0 0 11 1 1097.6193 P14635 P14635 26 36 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 2 0.023109 87.789 By MS/MS 6 0 1 1 1257600 1257600 0 11810 616 12557 29812 23749 23749 0 8645.4 0 RWEVADLQPQLK LMEFLLNVTTAPEFRRWEVADLQPQLKIDK EFRRWEVADLQPQLKIDKAVAFQNPQTHVI R R W L K I 1 1 0 1 0 2 1 0 0 0 2 1 0 0 1 0 0 1 0 1 0 0 12 1 1481.7991 P22695 P22695 148 159 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.00056948 152.67 By MS/MS 7 0 1 1 1514600 1514600 0 11811 696 12558 29813 23750 23750 1 23776 0 RWSRLCLPK MLRCLYHWHRPVLNRRWSRLCLPKQYLFTM RPVLNRRWSRLCLPKQYLFTMKLQSPEFQS R R W P K Q 0 2 0 0 1 0 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 9 2 1214.6706 Q96Q11 Q96Q11 16 24 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 2 0.010818 128.61 By MS/MS 4 0 1 1 454930 454930 0 11812 2212 12559 29814 23751 23751 1 42812 0 RYAHVVLR RKIAFAITAIKGVGRRYAHVVLRKADIDLT AIKGVGRRYAHVVLRKADIDLTKRAGELTE R R Y L R K 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 8 1 1012.593 P62269 P62269 39 46 RPS18 40S ribosomal protein S18 yes yes 2;3 0.0046932 128.61 By MS/MS 9.5 0.5 2 2 4 10673000 10673000 0 11813 1149 12560 29815;29816;29817;29818 23752;23753;23754 23752 3 248900 0 RYDDPEVQKDIK NPNNTFYATKRLIGRRYDDPEVQKDIKNVP IGRRYDDPEVQKDIKNVPFKIVRASNGDAW R R Y I K N 0 1 0 3 0 1 1 0 0 1 0 2 0 0 1 0 0 0 1 1 0 0 12 2 1504.7522 P38646 P38646 127 138 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 1.234E-07 208.17 By MS/MS By matching 6.88 1.83 3 1 1 1 1 1 7 1 35280000 35214000 66040 11814 850 12561 29819;29820;29821;29822;29823;29824;29825;29826 23755;23756 23756 2 372620 55459 RYDSNSGGEREIQR PSIVFIDEIDAIGTKRYDSNSGGEREIQRT KRYDSNSGGEREIQRTMLELLNQLDGFDSR K R Y Q R T 0 3 1 1 0 1 2 2 0 1 0 0 0 0 0 2 0 0 1 0 0 0 14 2 1665.7819 P62191 P62191 294 307 PSMC1 26S protease regulatory subunit 4 yes yes 3 0.036493 70.438 By MS/MS 6.5 0.5 1 1 2 2567600 2567600 0 11815 1141 12562 29827;29828 23757 23757 1 20966 0 RYGDFFIR IDKDMIHIADTKVARRYGDFFIRQIHKFEE ADTKVARRYGDFFIRQIHKFEELNRTLKKM R R Y I R Q 0 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 1 0 0 0 8 1 1072.5454 Q9Y262 Q9Y262 538 545 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.029303 89.698 By MS/MS 5.5 0.5 1 1 2 2422500 2422500 0 11816 2814 12563 29829;29830 23758 23758 1 22269 0 RYNGGVGR YLKDVTLQKQCVPFRRYNGGVGRCAQAKQW KQCVPFRRYNGGVGRCAQAKQWGWTQGRWP R R Y G R C 0 2 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 1 0 0 8 1 877.45185 P18621 P18621 62 69 RPL17 60S ribosomal protein L17 yes yes 1 0.039547 60.358 By matching By MS/MS 3.5 0.5 1 1 1 1 1429600 578940 850680 11817 654 12564 29831;29832 23759 23759 0 54482 108280 RYNIPHGPVVGSTR NYADLSDTELTTLLRRYNIPHGPVVGSTRR RRYNIPHGPVVGSTRRLYEKKIFEYETQRR R R Y T R R 0 2 1 0 0 0 0 2 1 1 0 0 0 0 2 1 1 0 1 2 0 0 14 1 1551.827 P50402 P50402 18 31 EMD Emerin yes yes 3 0.022271 76.759 By MS/MS 7.5 0.5 1 1 2 4448600 4448600 0 11818 973 12565 29833;29834 23760;23761 23760 2 66675 0 RYPSGEER KGPLSPRFRGEHALRRYPSGEERCIACKLC RGEHALRRYPSGEERCIACKLCEAICPAQA R R Y E R C 0 2 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 992.46756 O00217 O00217 103 110 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 2 0.036144 110.12 By MS/MS 9.5 0.5 1 1 2 3134400 3134400 0 11819 92 12566 29835;29836 23762 23762 1 64276 0 SAAGGALHSLAGAR IRAAQKDEYYRGGLRSAAGGALHSLAGARK RSAAGGALHSLAGARKWLEWRKEVELLSDV R S A A R K 5 1 0 0 0 0 0 3 1 0 2 0 0 0 0 2 0 0 0 0 0 0 14 0 1237.6527 O60683 O60683 27 40 PEX10 Peroxisome biogenesis factor 10 yes yes 2 0.0014704 116.74 By MS/MS 7.5 0.5 1 1 2 941630 941630 0 11820 270 12567 29837;29838 23763 23763 1 13847 0 SAAPSTLDSSSTAPAQLGK QQQLEKELNTLRVTRSAAPSTLDSSSTAPA STLDSSSTAPAQLGKKGKEFEFSQLPLKVE R S A G K K 4 0 0 1 0 1 0 1 0 0 2 1 0 0 2 5 2 0 0 0 0 0 19 0 1787.8901 Q9Y5M8 Q9Y5M8 209 227 SRPRB Signal recognition particle receptor subunit beta yes yes 2 4.1508E-12 244.71 By MS/MS By MS/MS 8.6 0.8 3 1 1 4 1 21918000 21802000 116730 11821 2917 12568 29839;29840;29841;29842;29843 23764;23765;23766;23767;23768 23766 5 295910 157520 SAAPSTLDSSSTAPAQLGKK QQQLEKELNTLRVTRSAAPSTLDSSSTAPA TLDSSSTAPAQLGKKGKEFEFSQLPLKVEF R S A K K G 4 0 0 1 0 1 0 1 0 0 2 2 0 0 2 5 2 0 0 0 0 0 20 1 1915.9851 Q9Y5M8 Q9Y5M8 209 228 SRPRB Signal recognition particle receptor subunit beta yes yes 2 2.8536E-05 201.3 By MS/MS 8 0 1 1 3332700 3332700 0 11822 2917 12569 29844 23769 23769 1 42075 0 SAAQAAAQTNSNAAGK KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG AAQAAAQTNSNAAGKQLRKESQKDRKNPLP K S A G K Q 7 0 2 0 0 2 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 16 0 1459.7015 Q8NC51 Q8NC51 53 68 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 4.0407E-53 323.44 By MS/MS By MS/MS 7.29 1.67 1 2 1 1 1 1 6 1 37707000 37276000 431020 11823 1946 12570 29845;29846;29847;29848;29849;29850;29851 23770;23771;23772;23773;23774;23775;23776 23770 7 284050 441680 SAAQMEVASFLLSK TTPSKPGGDRYIPHRSAAQMEVASFLLSKE RSAAQMEVASFLLSKENQPENSQTPTKKEH R S A S K E 3 0 0 0 0 1 1 0 0 0 2 1 1 1 0 3 0 0 0 1 0 0 14 0 1480.7596 Q12834 Q12834 84 97 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.00042816 161.87 By MS/MS 6 0 1 1 306760 306760 0 11824 1332 12571 29852 23777 23777 1 2108.7 0 SAATSGAGSTTSGVVSGSLGSR EDPCTLRHTMEKVVRSAATSGAGSTTSGVV GSTTSGVVSGSLGSREINYILRVLGPAACR R S A S R E 3 1 0 0 0 0 0 5 0 0 1 0 0 0 0 7 3 0 0 2 0 0 22 0 1895.9185 Q7Z6Z7 Q7Z6Z7 1844 1865 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 8.3779E-07 195.6 By MS/MS 1.5 0.5 1 1 2 895600 895600 0 11825 1802 12572 29853;29854 23778;23779 23778 2 256910 0 SACDTVDTWLDDTAK LGWSKKYEFGESDLRSACDTVDTWLDDTAK SACDTVDTWLDDTAKGRQNISPDKIPWSAL R S A A K G 2 0 0 4 1 0 0 0 0 0 1 1 0 0 0 1 3 1 0 1 0 0 15 0 1696.725 Q14204 Q14204 4214 4228 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.8441E-07 216.03 By MS/MS 1 0 1 1 91617 91617 0 11826 1433 12573 29855 23780;23781 23781 2 22077 0 SACEQFIQQQTK EHYLDSKKDVDRHLKSACEQFIQQQTKLFV HLKSACEQFIQQQTKLFVEQLEEFMTKVSA K S A T K L 1 0 0 0 1 4 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 12 0 1466.6824 Q96JB2 Q96JB2 695 706 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 1.6116E-33 298.58 By MS/MS 4 0 1 1 1981700 1981700 0 11827 2176 12574 29856 23782 23782 1 186490 0 SACGVCPGR RIVYLYTKKVGKAPKSACGVCPGRLRGVRA VGKAPKSACGVCPGRLRGVRAVRPKVLMRL K S A G R L 1 1 0 0 2 0 0 2 0 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 962.40622 P49207 P49207 44 52 RPL34 60S ribosomal protein L34 yes yes 2 0.00014599 157.58 By MS/MS 9 0 1 1 1083500 1083500 0 11828 945 12575 29857 23783 23783 1 21323 0 SADFAELEVLR EQLAGVGQGRLAQERSADFAELEVLRQREM AQERSADFAELEVLRQREMAEKKTRALQRG R S A L R Q 2 1 0 1 0 0 2 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1248.635 Q9UNS1 Q9UNS1 247 257 TIMELESS Protein timeless homolog yes yes 2 1.7642E-05 166.07 By MS/MS 3 0 1 1 164130 164130 0 11829 2792 12576 29858 23784 23784 1 3003.1 0 SADGSAPAGEGEGVTLQR AEEKEEAREKMLAAKSADGSAPAGEGEGVT GSAPAGEGEGVTLQRNITLLNGVAIIVGTI K S A Q R N 3 1 0 1 0 1 2 4 0 0 1 0 0 0 1 2 1 0 0 1 0 0 18 0 1700.7966 Q01650 Q01650 31 48 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 2 8.3529E-17 251.91 By MS/MS 3.25 2.28 1 1 1 1 4 2866300 2866300 0 11830 1268 12577 29859;29860;29861;29862 23785;23786;23787 23787 3 251510 0 SADIALVAGGSR PFEEKVIQVRYDPCRSADIALVAGGSRKRW PCRSADIALVAGGSRKRWIIATENMQAGDT R S A S R K 3 1 0 1 0 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1115.5935 Q5T653 Q5T653 136 147 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 2 0.014616 118.28 By MS/MS 8 0 1 1 0 0 0 11831 1634 12578 29863 23788 23788 1 0 0 SADTLWDIQK INQKLKDDEVAQLKKSADTLWDIQKDLKDL AQLKKSADTLWDIQKDLKDL__________ K S A Q K D 1 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1175.5823 P07195 P07195 320 329 LDHB L-lactate dehydrogenase B chain yes yes 2 0.00059217 131.5 By MS/MS 7 0 1 1 579200 579200 0 11832 506 12579 29864 23789 23789 1 9092.4 0 SAEAGIAGEAQSK AAAVVRAAVSASRAKSAEAGIAGEAQSKKP AKSAEAGIAGEAQSKKPVSRPATAAAAAAG K S A S K K 4 0 0 0 0 1 2 2 0 1 0 1 0 0 0 2 0 0 0 0 0 0 13 0 1217.5888 Q7Z478 Q7Z478 27 39 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 0.00084903 128.85 By MS/MS 3 0 1 1 376930 376930 0 11833 1791 12580 29865 23790 23790 1 6896.7 0 SAEAYENFLR GTESLFFDKVRKALRSAEAYENFLRCLVIF RKALRSAEAYENFLRCLVIFNQEVISRAEL R S A L R C 2 1 1 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 10 0 1198.5619 Q96ST3 Q96ST3 476 485 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.0099656 94.409 By MS/MS 3 0 1 1 314280 314280 0 11834 2235 12581 29866 23791 23791 1 5750.5 0 SAEEEAADLPTKPTK SSNGGESSSRSAEKRSAEEEAADLPTKPTK SAEEEAADLPTKPTKISKFGFAIGSQTTKK R S A T K I 3 0 0 1 0 0 3 0 0 0 1 2 0 0 2 1 2 0 0 0 0 0 15 1 1585.7835 Q8WW12 Q8WW12 53 67 PCNP PEST proteolytic signal-containing nuclear protein yes yes 2 0.002188 166.04 By MS/MS 9 0 1 1 176940 176940 0 11835 2032 12582 29867 23792;23793 23792 2 3482.3 0 SAEELKEMQDK YIAYQFLLAEDTKVRSAEELKEMQDKVIKL TKVRSAEELKEMQDKVIKLQEELSENDKKI R S A D K V 1 0 0 1 0 1 3 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 11 1 1306.6075 O95347 O95347 249 259 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 2.9297E-12 226.09 By MS/MS 3 0 1 1 327110 327110 0 11836 405 12583 29868 23794 23794 1 5985.1 0 SAEFLLHMLK QAKQWGWTQGRWPKKSAEFLLHMLKNAESN RWPKKSAEFLLHMLKNAESNAELKGLDVDS K S A L K N 1 0 0 0 0 0 1 0 1 0 3 1 1 1 0 1 0 0 0 0 0 0 10 0 1187.6373 P18621 P18621 87 96 RPL17 60S ribosomal protein L17 yes yes 2 0.0070416 100.02 By MS/MS 9 0 1 1 0 0 0 11837 654 12584 29869 23795 23795 328 1 0 0 SAELVGTFVSPEVFLK ACTDEEAAVVQSCTRSAELVGTFVSPEVFL AELVGTFVSPEVFLKLILSTLKKTPSASGL R S A L K L 1 0 0 0 0 0 2 1 0 0 2 1 0 2 1 2 1 0 0 3 0 0 16 0 1721.924 Q86Y56 Q86Y56 423 438 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 8.9581E-11 226.33 By MS/MS 4 0 1 1 157630 157630 0 11838 1850 12585 29870 23796;23797 23797 2 14834 0 SAEQISDSVR LNPDGLFTDYYGRSRSAEQISDSVRRHMAA YGRSRSAEQISDSVRRHMAAFRSVLS____ R S A V R R 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 0 1 0 0 10 0 1090.5255 O43819 O43819 246 255 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.0082891 86.344 By MS/MS 8 0 1 1 1588400 1588400 0 11839 238 12586 29871 23798 23798 1 20053 0 SAEQISDSVRR LNPDGLFTDYYGRSRSAEQISDSVRRHMAA GRSRSAEQISDSVRRHMAAFRSVLS_____ R S A R R H 1 2 0 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 0 1 0 0 11 1 1246.6266 O43819 O43819 246 256 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.0026103 126.31 By MS/MS 8 0 1 1 3245400 3245400 0 11840 238 12587 29872 23799 23799 1 40973 0 SAEVETSEGVDESEKK ______________________________ AEVETSEGVDESEKKNSGALEKENQMRMAD M S A K K N 1 0 0 1 0 0 5 1 0 0 0 2 0 0 0 3 1 0 0 2 0 0 16 1 1722.7796 P30519 P30519 2 17 HMOX2 Heme oxygenase 2 yes yes 2 1.5705E-24 290.28 By MS/MS 7 0 1 1 3320600 3320600 0 11841 773 12588 29873 23800 23800 1 52128 0 SAEYGSSLQSSR AEAYSRSQLEEQAARSAEYGSSLQSSRSEI AARSAEYGSSLQSSRSEIADLNVRIQKLRS R S A S R S 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 5 0 0 1 0 0 0 12 0 1270.579 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 285 296 KRT80 Keratin, type II cytoskeletal 80 yes no 2 4.7743E-28 261.87 By matching By MS/MS 3.78 2.48 2 2 1 1 1 1 1 3 6 1202400 315130 887290 + 11842 69 12589 29874;29875;29876;29877;29878;29879;29880;29881;29882 23801;23802;23803;23804;23805;23806 23803 6 50869 447180 SAFEKPQIIAHIQK ______________________________ MSAFEKPQIIAHIQKGFNYTVFDCKWVPCS M S A Q K G 2 0 0 0 0 2 1 0 1 3 0 2 0 1 1 1 0 0 0 0 0 0 14 1 1608.8988 Q96MX6 Q96MX6 2 15 WDR92 WD repeat-containing protein 92 yes yes 3 0.00010553 136.27 By MS/MS 7.5 0.5 1 1 2 2809800 2809800 0 11843 2198 12590 29883;29884 23807 23807 1 42168 0 SAFLQVQPR RIEAIFAKHRQRLGKSAFLQVQPREASGEA RQRLGKSAFLQVQPREASGEAEAEAEEADS K S A P R E 1 1 0 0 0 2 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 9 0 1044.5716 Q9P1Y5 Q9P1Y5 635 643 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0072951 98.582 By MS/MS 3 0 1 1 437610 437610 0 11844 2673 12591 29885 23808 23808 1 8007 0 SAFSSAETTELSGK AKEEVLQDPVLKQFKSAFSSAETTELSGKC KSAFSSAETTELSGKCVVALATDPNILSLS K S A G K C 2 0 0 0 0 0 2 1 0 0 1 1 0 1 0 4 2 0 0 0 0 0 14 0 1413.6624 Q96LJ7 Q96LJ7 221 234 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 2 6.7044E-11 226.33 By MS/MS 8 0 1 1 707880 707880 0 11845 2195 12592 29886 23809 23809 1 8936.9 0 SAFTERDAGSGLVTR PFRARSEPEDPVTERSAFTERDAGSGLVTR SAFTERDAGSGLVTRLRERPALLVSSTSWT R S A T R L 2 2 0 1 0 0 1 2 0 0 1 0 0 1 0 2 2 0 0 1 0 0 15 1 1565.7798 Q9BT22 Q9BT22 258 272 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 3 0.024292 73.593 By MS/MS 7 0 1 1 1614400 1614400 0 11846 2312 12593 29887 23810 23810 1 25342 0 SAGGDFGNPLRK ______________________________ ______________________________ M S A R K F 1 1 1 1 0 0 0 3 0 0 1 1 0 1 1 1 0 0 0 0 0 0 12 1 1217.6153 Q9NRW1;Q53S08;Q9H0N0 Q9NRW1 2 13 RAB6B;RAB6C Ras-related protein Rab-6B;Ras-related protein Rab-6C yes no 2 0.0011075 128.35 By MS/MS 8.5 0.5 1 1 2 696160 696160 0 11847 2558 12594 29888;29889 23811 23811 1 12030 0 SAGLEQPTDPVAR GSTLTPKIQKDGISKSAGLEQPTDPVARDG SKSAGLEQPTDPVARDGPLSQTSSKPDPSQ K S A A R D 2 1 0 1 0 1 1 1 0 0 1 0 0 0 2 1 1 0 0 1 0 0 13 0 1339.6732 O75410 O75410 361 373 TACC1 Transforming acidic coiled-coil-containing protein 1 yes yes 2 0.00036812 145.28 By MS/MS 3 0 1 1 441380 441380 0 11848 324 12595 29890 23812 23812 1 8076 0 SAGNAVWLNR TVPLITSTTGAKLGKSAGNAVWLNRDKTSP AKLGKSAGNAVWLNRDKTSPFELYQFFVRQ K S A N R D 2 1 2 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 10 0 1086.557 Q9Y2Z4 Q9Y2Z4 285 294 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 1.1628E-05 173.39 By MS/MS 7 0 1 1 2269900 2269900 0 11849 2852 12596 29891 23813 23813 1 35634 0 SAGQGEVLVYVEDPAGHQEEAK GNMVKKRAEFTVETRSAGQGEVLVYVEDPA LVYVEDPAGHQEEAKVTANNDKNRTFSVWY R S A A K V 3 0 0 1 0 2 4 3 1 0 1 1 0 0 1 1 0 0 1 3 0 0 22 0 2312.0921 P21333 P21333 310 331 FLNA Filamin-A yes yes 3 0.00058546 91.622 By MS/MS 1.5 0.5 1 1 2 774100 774100 0 11850 677 12597 29892;29893 23814;23815;23816;23817 23816 4 226570 0 SAHAGTYEVR QDVGRYQVSWSLDHKSAHAGTYEVRFFDEE SLDHKSAHAGTYEVRFFDEESYSLLRKAQR K S A V R F 2 1 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1089.5203 P51571 P51571 96 105 SSR4 Translocon-associated protein subunit delta yes yes 2;3 0.0021026 112.11 By MS/MS 9.5 0.5 2 2 4 25104000 25104000 0 11851 998 12598 29894;29895;29896;29897 23818;23819;23820 23818 3 927240 0 SAHQVAR KCCSGAIIVLTKSGRSAHQVARYRPRAPII IVLTKSGRSAHQVARYRPRAPIIAVTRNPQ R S A A R Y 2 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 7 0 767.40383 P14618 P14618 437 443 PKM Pyruvate kinase PKM yes yes 2 0.020797 111.65 By MS/MS By matching 5.75 2.63 1 1 1 1 1 1 1 1 6 2 1830100 1797800 32262 11852 614 12599 29898;29899;29900;29901;29902;29903;29904;29905 23821;23822;23823 23821 3 24660 23170 SAHRDCEDVAK PILDLGAEALIMQARSAHRDCEDVAKAALR MQARSAHRDCEDVAKAALRDLGCHVELREL R S A A K A 2 1 0 2 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 11 1 1286.5673 Q6NXE6 Q6NXE6 466 476 ARMC6 Armadillo repeat-containing protein 6 yes yes 3 0.0063807 90.827 By MS/MS 6.5 0.5 1 1 2 1145100 1145100 0 11853 1692 12600 29906;29907 23824 23824 1 16582 0 SAIDLTPIVVEDKEEK TEPKGAADVEKVEEKSAIDLTPIVVEDKEE AIDLTPIVVEDKEEKKEEEEKKEVMLQNGE K S A E K K 1 0 0 2 0 0 3 0 0 2 1 2 0 0 1 1 1 0 0 2 0 0 16 1 1784.9408 Q14839 Q14839 1648 1663 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.0023427 164.48 By MS/MS 2 0 1 1 206270 206270 0 11854 1459 12601 29908 23825 23825 1 69770 0 SAINEVVTR ______________________________ EKKKGRSAINEVVTREYTINIHKRIHGVGF R S A T R E 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 987.53491 P62899 P62899 15 23 RPL31 60S ribosomal protein L31 yes yes 2 2.4971E-05 176.33 By MS/MS By MS/MS 9.5 0.5 2 2 2 2 9697200 9308900 388350 11855 1183 12602 29909;29910;29911;29912 23826;23827;23828;23829 23828 4 439240 617960 SAIPAEESDQLLIRPLGAGQEVGR ______________________________ QLLIRPLGAGQEVGRSCIILEFKGRKIMLD M S A G R S 3 2 0 1 0 2 3 3 0 2 3 0 0 0 2 2 0 0 0 1 0 0 24 1 2505.3187 Q9UKF6 Q9UKF6 2 25 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 3 0.00019477 88.951 By MS/MS 5 0 1 1 498970 498970 0 11856 2759 12603 29913 23830 23830 1 5004.4 0 SAIQNLHSFDPFADASK ______________________________ IQNLHSFDPFADASKGDDLLPAGTEDYIHI M S A S K G 3 0 1 2 0 1 0 0 1 1 1 1 0 2 1 3 0 0 0 0 0 0 17 0 1846.885 P41567 P41567 2 18 EIF1 Eukaryotic translation initiation factor 1 yes yes 2 2.8471E-08 225.21 By MS/MS 10 0 1 1 202730 202730 0 11857 872 12604 29914 23831 23831 1 10926 0 SAKPETVIDSLLQ TSKGKARPKTGRRKRSAKPETVIDSLLQ__ KRSAKPETVIDSLLQ_______________ R S A L Q - 1 0 0 1 0 1 1 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 13 1 1399.7559 Q9Y496 Q9Y496 687 699 KIF3A Kinesin-like protein KIF3A yes yes 2 0.0054658 124.21 By MS/MS 5 0 1 1 386210 386210 0 11858 2889 12605 29915 23832 23832 1 3873.5 0 SAKPGDDVRER IERLSIRKEGDGEAKSAKPGDDVRERIIKR GEAKSAKPGDDVRERIIKRAALEFEDGMYA K S A E R I 1 2 0 2 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 11 2 1228.616 P55809 P55809 294 304 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 5.0527E-05 157.97 By MS/MS 6 0 1 1 939370 939370 0 11859 1063 12606 29916 23833 23833 1 6457.5 0 SALALAIK SMLKQDYKEGEMTLKSALALAIKVLNKTMD EGEMTLKSALALAIKVLNKTMDVSKLSAEK K S A I K V 3 0 0 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 785.50109 P25789 P25789 188 195 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.012395 108.09 By MS/MS 8 0 1 1 3909300 3909300 0 11860 727 12607 29917 23834 23834 1 49354 0 SALLDFYMK FCTSHKEMDVVSQHKSALLDFYMKNILMSK VVSQHKSALLDFYMKNILMSKVKPPKYLLD K S A M K N 1 0 0 1 0 0 0 0 0 0 2 1 1 1 0 1 0 0 1 0 0 0 9 0 1086.542 Q92616 Q92616 221 229 GCN1L1 Translational activator GCN1 yes yes 2 0.011061 98.582 By MS/MS 2 0 1 1 106100 106100 0 11861 2064 12608 29918 23835 23835 1 35888 0 SALNDVTAAR YTNRAAAQYYLGNFRSALNDVTAARKLKPC LGNFRSALNDVTAARKLKPCHLKAIIRGAL R S A A R K 3 1 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1016.5251 O95801 O95801 135 144 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 2.6172E-05 163.88 By MS/MS 6.5 0.5 1 1 2 2435400 2435400 0 11862 427 12609 29919;29920 23836;23837 23836 2 21472 0 SALQELEELK KFHRASVLFANEKYKSALQELEELKQIVPK NEKYKSALQELEELKQIVPKESLVYFLIGK K S A L K Q 1 0 0 0 0 1 3 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 10 0 1158.6132 P30260 P30260 721 730 CDC27 Cell division cycle protein 27 homolog yes yes 2 1.8028E-05 183.72 By MS/MS 4 0 1 1 408470 408470 0 11863 771 12610 29921 23838 23838 1 38440 0 SALSCVISK LIAYYKENKDREDKRSALSCVISKTARLLS DREDKRSALSCVISKTARLLSSEDRARLPE R S A S K T 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 3 0 0 0 1 0 0 9 0 963.50592 Q9UIG0 Q9UIG0 493 501 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.039585 80.455 By MS/MS 2 0 1 1 203700 203700 0 11864 2742 12611 29922 23839 23839 1 68901 0 SAMGMFVDAFSK GTDSGCYSAFVVWARSAMGMFVDAFSKQVF WARSAMGMFVDAFSKQVFDSKESLSTAAEC R S A S K Q 2 0 0 1 0 0 0 1 0 0 0 1 2 2 0 2 0 0 0 1 0 0 12 0 1289.5784 Q8IYI6 Q8IYI6 495 506 EXOC8 Exocyst complex component 8 yes yes 2 0.00095371 126.03 By MS/MS 5 0 1 1 40590 40590 0 11865 1887 12612 29923 23840;23841 23841 2 407.1 0 SAMPFTASPASSTTAR SEPQEVLHIGSAHNRSAMPFTASPASSTTA AMPFTASPASSTTARVITNQYNNPAGLYSS R S A A R V 4 1 0 0 0 0 0 0 0 0 0 0 1 1 2 4 3 0 0 0 0 0 16 0 1581.7457 O00151 O00151 123 138 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 5.6177E-05 193.49 By MS/MS 7 0 1 1 637170 637170 0 11866 84 12613 29924 23842 23842 57 1 10002 0 SANSELGGIWSVGQR NNARYLWKRIPPAIKSANSELGGIWSVGQR SANSELGGIWSVGQRIWQRDFPGIYTTINA K S A Q R I 1 1 1 0 0 1 1 3 0 1 1 0 0 0 0 3 0 1 0 1 0 0 15 0 1559.7692 Q99627 Q99627 66 80 COPS8 COP9 signalosome complex subunit 8 yes yes 2 0.00034465 188.96 By MS/MS 9 0 1 1 318580 318580 0 11867 2255 12614 29925 23843 23843 1 6269.7 0 SANVNEFPVLK NLTEFFVNHILPDLKSANVNEFPVLKADGI PDLKSANVNEFPVLKADGIKYIMIFRNQVP K S A L K A 1 0 2 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 11 0 1216.6452 P55060 P55060 471 481 CSE1L Exportin-2 yes yes 2 5.2872E-05 172.98 By MS/MS 3 1.41 1 1 1 1 1 5 11214000 11214000 0 11868 1053 12615 29926;29927;29928;29929;29930 23844;23845 23844 2 1006500 0 SAPAGSSHPAASAR ______________________________ MSAPAGSSHPAASARIPPKFGGAAVSGAAA M S A A R I 5 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 14 0 1265.6113 O95487 O95487 2 15 SEC24B Protein transport protein Sec24B yes yes 2 2.5803E-05 196.27 By MS/MS 3.5 0.5 1 1 2 568150 568150 0 11869 414 12616 29931;29932 23846 23846 1 16071 0 SAQAAPEPR FSTGIQAKTTKPKSRSAQAAPEPRFEHKVS TKPKSRSAQAAPEPRFEHKVSNIFDDPLNA R S A P R F 3 1 0 0 0 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 9 0 925.46174 Q9Y4E1;Q641Q2;Q5SRD0 Q9Y4E1 1293 1301 FAM21C;FAM21A;FAM21D WASH complex subunit FAM21C;WASH complex subunit FAM21A;Putative WASH complex subunit FAM21 yes no 2 0.049483 76.17 By MS/MS 2 0 1 1 164880 164880 0 11870 1665 12617 29933 23847 23847 1 55768 0 SAQPASAEPR QAAKGLAGAVSELLRSAQPASAEPRQNLLQ SELLRSAQPASAEPRQNLLQAAGNVGQASG R S A P R Q 3 1 0 0 0 1 1 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1012.4938 Q9Y490 Q9Y490 625 634 TLN1 Talin-1 yes yes 2 0.00094564 124.67 By MS/MS 2.5 0.5 1 1 2 1509500 1509500 0 11871 2888 12618 29934;29935 23848 23848 1 431090 0 SARDHAISLSEPR EGSPNSSESFEHIARSARDHAISLSEPRML ARSARDHAISLSEPRMLWGSDPYPHAEPQQ R S A P R M 2 2 0 1 0 0 1 0 1 1 1 0 0 0 1 3 0 0 0 0 0 0 13 1 1437.7324 Q9Y520 Q9Y520 792 804 PRRC2C Protein PRRC2C yes yes 3 0.0017492 110.25 By MS/MS 2 0.816 1 1 1 3 550800 550800 0 11872 2905 12619 29936;29937;29938 23849;23850 23849 2 134200 0 SASASHQADIK SRSRSPGRPPKSARRSASASHQADIKEARR SARRSASASHQADIKEARREVEVKLTPLIL R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 Q14739 Q14739 97 107 LBR Lamin-B receptor yes yes 2 0.0001969 143.4 By MS/MS By matching 3.6 2.06 1 1 1 2 4 1 1142300 1131100 11168 11873 1456 12620 29939;29940;29941;29942;29943 23851;23852;23853 23852 3 161190 11444 SASASHQADIKEAR SRSRSPGRPPKSARRSASASHQADIKEARR RSASASHQADIKEARREVEVKLTPLILKPF R S A A R R 4 1 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 14 1 1469.7223 Q14739 Q14739 97 110 LBR Lamin-B receptor yes yes 3 0.001778 110.15 By MS/MS 1.5 0.5 1 1 2 403930 403930 0 11874 1456 12621 29944;29945 23854;23855 23854 2 116030 0 SASASPLTPCSVTR PDRTHPSAAVPVCPRSASASPLTPCSVTRS RSASASPLTPCSVTRSVHRCAPAGERGERR R S A T R S 2 1 0 0 1 0 0 0 0 0 1 0 0 0 2 4 2 0 0 1 0 0 14 0 1432.698 Q3KQU3 Q3KQU3 364 377 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.00051265 138.25 By MS/MS 3.5 0.5 1 1 2 1569200 1569200 0 11875 1575 12622 29946;29947 23856 23856 1 64103 0 SASAVYVLDLK ______________________________ ______________________________ M S A L K G 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 2 0 0 1 2 0 0 11 0 1164.639 Q9BXS5 Q9BXS5 2 12 AP1M1 AP-1 complex subunit mu-1 yes yes 2 0.0028892 109.79 By MS/MS 6 0 1 1 180920 180920 0 11876 2359 12623 29948 23857 23857 0 1243.7 0 SASHAVPASK TELQEVRAQLCNPGRSASHAVPASKK____ CNPGRSASHAVPASKK______________ R S A S K K 3 0 0 0 0 0 0 0 1 0 0 1 0 0 1 3 0 0 0 1 0 0 10 0 953.49304 Q9H6K4 Q9H6K4 169 178 OPA3 Optic atrophy 3 protein yes yes 2 0.0002573 137.95 By MS/MS 9 0 1 1 589100 589100 0 11877 2457 12624 29949 23858 23858 1 11594 0 SASHAVPASKK TELQEVRAQLCNPGRSASHAVPASKK____ NPGRSASHAVPASKK_______________ R S A K K - 3 0 0 0 0 0 0 0 1 0 0 2 0 0 1 3 0 0 0 1 0 0 11 1 1081.588 Q9H6K4 Q9H6K4 169 179 OPA3 Optic atrophy 3 protein yes yes 2;3 0.00083051 139.38 By MS/MS 9 0 2 2 470280 470280 0 11878 2457 12625 29950;29951 23859;23860 23859 2 9255.1 0 SASLCAATLAAVLQR DCVATHRICQIVSTRSASLCAATLAAVLQR SASLCAATLAAVLQRIKENKGEERLRSTIG R S A Q R I 5 1 0 0 1 1 0 0 0 0 3 0 0 0 0 2 1 0 0 1 0 0 15 0 1530.8188 P52789 P52789 382 396 HK2 Hexokinase-2 yes yes 2 0.00098414 123.67 By MS/MS 4 0 1 1 90775 90775 0 11879 1023 12626 29952 23861 23861 1 8542.5 0 SASLDVEPIYTFR TLKLWNLQKTVPAKKSASLDVEPIYTFRAH KKSASLDVEPIYTFRAHIGPVLSLAISSNG K S A F R A 1 1 0 1 0 0 1 0 0 1 1 0 0 1 1 2 1 0 1 1 0 0 13 0 1496.7511 Q13033 Q13033 518 530 STRN3 Striatin-3 yes yes 2 0.0001069 172.8 By MS/MS 5.5 1.12 1 1 1 1 4 3531400 3531400 0 11880 1346 12627 29953;29954;29955;29956 23862;23863 23863 2 231500 0 SASSLLEQRPK ______________________________ ______________________________ M S A P K G 1 1 0 0 0 1 1 0 0 0 2 1 0 0 1 3 0 0 0 0 0 0 11 1 1214.6619 Q9Y5A9 Q9Y5A9 2 12 YTHDF2 YTH domain-containing family protein 2 yes yes 2 9.527E-10 221.68 By MS/MS By MS/MS 5.75 0.829 2 1 1 3 1 17450000 17365000 84697 11881 2908 12628 29957;29958;29959;29960 23864;23865;23866 23865 3 163170 71127 SASVVETQTLFR VLTYTIPISNPLGPKSASVVETQTLFRRGP GPKSASVVETQTLFRRGPQAGGCVVDSEVL K S A F R R 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 2 2 0 0 2 0 0 12 0 1336.6987 Q96CP6 Q96CP6 437 448 GRAMD1A GRAM domain-containing protein 1A yes yes 2 5.7509E-09 219.72 By MS/MS 4.5 0.5 1 1 2 1605900 1605900 0 11882 2123 12629 29961;29962 23867 23867 1 117570 0 SASVVSVISR ______________________________ ______________________________ M S A S R F 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 3 0 0 10 0 1003.5662 P61803 P61803 2 11 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 0.000196 147.4 By MS/MS 5.75 4.26 1 1 2 4 2845000 2845000 0 11883 1130 12630;12631 29963;29964;29965;29966 23868;23869;23870;23871;23872;23873 23873 5 219070 0 SATEQSGTGIR TVGVFAKATAQDNPKSATEQSGTGIRSESE DNPKSATEQSGTGIRSESETESEASEITIP K S A I R S 1 1 0 0 0 1 1 2 0 1 0 0 0 0 0 2 2 0 0 0 0 0 11 0 1105.5364 O95831 O95831 519 529 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 2.7519E-13 238.01 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 32787000 32787000 0 11884 429 12632 29967;29968;29969;29970;29971;29972 23874;23875;23876;23877;23878;23879 23874 6 327000 0 SATKDSLIIIDELGR STFMAEMLETASILRSATKDSLIIIDELGR SATKDSLIIIDELGRGTSTYDGFGLAWAIS R S A G R G 1 1 0 2 0 0 1 1 0 3 2 1 0 0 0 2 1 0 0 0 0 0 15 1 1629.8938 P43246 P43246 738 752 MSH2 DNA mismatch repair protein Msh2 yes yes 3 0.00096448 113.4 By MS/MS 4 0 1 1 242020 242020 0 11885 894 12633 29973 23880 23880 1 22776 0 SATKVTADVINAAEK ELIAELQDCEGLIVRSATKVTADVINAAEK SATKVTADVINAAEKLQVVGRAGTGVDNVD R S A E K L 4 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 2 0 0 2 0 0 15 1 1516.8097 O43175 O43175 55 69 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 2.3958E-06 209.11 By MS/MS 6 0 2 2 15667000 15667000 0 11886 195 12634 29974;29975 23881;23882 23881 2 107700 0 SATLASIDAELQK KTKEYELLSDELNQKSATLASIDAELQKLK QKSATLASIDAELQKLKEMTNHQKKRAAEM K S A Q K L 3 0 0 1 0 1 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 0 1345.7089 P33176 P33176 527 539 KIF5B Kinesin-1 heavy chain yes yes 2 2.8338E-13 248.09 By MS/MS 4 0 1 1 3159400 3159400 0 11887 800 12635 29976 23883 23883 1 297320 0 SATLLQLITK YQSLLNSYGEPVDDKSATLLQLITKFATEY PVDDKSATLLQLITKFATEYCNTIEGTAKY K S A T K F 1 0 0 0 0 1 0 0 0 1 3 1 0 0 0 1 2 0 0 0 0 0 10 0 1086.6649 O00429 O00429 330 339 DNM1L Dynamin-1-like protein yes yes 2 6.2374E-08 196.52 By MS/MS 5 0 1 1 314870 314870 0 11888 105 12636 29977 23884 23884 1 3157.9 0 SATSVDQRPK ______________________________ ______________________________ M S A P K G 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1087.5622 Q7Z739 Q7Z739 2 11 YTHDF3 YTH domain-containing family protein 3 yes yes 2 0.00052009 125.82 By MS/MS 5 0 1 1 0 0 0 11889 1803 12637 29978 23885 23885 1 0 0 SATYVNTEGR PIADVILPGAAYTEKSATYVNTEGRAQQTK AYTEKSATYVNTEGRAQQTKVAVTPPGLAR K S A G R A 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 2 0 1 1 0 0 10 0 1096.5149 P28331 P28331 593 602 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.00015644 155.06 By MS/MS By matching 5 0 2 1 1 2208200 2149200 59041 11890 753 12638 29979;29980 23886 23886 1 21555 49581 SAVADKHELLSLASSNHLGK NSHLINVLMWELEKKSAVADKHELLSLASS KHELLSLASSNHLGKNLQLLMDRVDEMSQD K S A G K N 3 0 1 1 0 0 1 1 2 0 4 2 0 0 0 4 0 0 0 1 0 0 20 1 2076.0964 O15372 O15372 222 241 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 3;4 7.8766E-09 217.65 By MS/MS 7.33 0.471 2 1 3 16395000 16395000 0 11891 186 12639 29981;29982;29983 23887;23888 23888 2 255520 0 SAVEAERLVAGK EMQKLDAQVKELVLKSAVEAERLVAGKLKK VLKSAVEAERLVAGKLKKDTYIENEKLISG K S A G K L 3 1 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 12 1 1228.6776 P04843 P04843 565 576 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.0003557 135.8 By MS/MS By MS/MS 6 1.15 3 1 1 1 5 1 12666000 12606000 59988 11892 478 12640 29984;29985;29986;29987;29988;29989 23889;23890;23891 23890 2 125800 50377 SAVENCQDSWR RNPELQNLLLDDFFKSAVENCQDSWRRAVS DFFKSAVENCQDSWRRAVSTGVQAGIPMPC K S A W R R 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 2 0 1 0 1 0 0 11 0 1350.5623 P52209 P52209 397 407 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.00081749 125.23 By MS/MS 6.5 0.5 1 1 2 2298400 2298400 0 11893 1011 12641 29990;29991 23892 23892 1 18549 0 SAVGHEYQSK GYGGKFGVEQDRMDKSAVGHEYQSKLSKHC DRMDKSAVGHEYQSKLSKHCSQVDSVRGFG K S A S K L 1 0 0 0 0 1 1 1 1 0 0 1 0 0 0 2 0 0 1 1 0 0 10 0 1104.52 Q14247 Q14247 98 107 CTTN Src substrate cortactin yes yes 2 4.9767E-05 157.34 By MS/MS 4.5 0.5 1 1 2 615370 615370 0 11894 1435 12642 29992;29993 23893;23894 23894 1 18179 0 SAVLQEAR EESGGGSNPFQHLEKSAVLQEARVFNETPI PFQHLEKSAVLQEARVFNETPINPRKCAHI K S A A R V 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 872.47158 Q9Y678;Q9UBF2 Q9Y678 25 32 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 0.0059596 121.05 By MS/MS By matching 5.6 1.62 2 1 1 1 4 1 13654000 13593000 60740 11895 2933;2697 12643 29994;29995;29996;29997;29998 23895;23896 23895 2 1043800 129420 SAVLSEPVLFLK VCVGRNYADHVREMRSAVLSEPVLFLKPST EMRSAVLSEPVLFLKPSTAYAPEGSPILMP R S A L K P 1 0 0 0 0 0 1 0 0 0 3 1 0 1 1 2 0 0 0 2 0 0 12 0 1301.7595 Q6P587 Q6P587 36 47 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2 0.013375 96.143 By MS/MS 8 0 1 1 60066 60066 0 11896 1712 12644 29999 23897 23897 0 758.32 0 SAVPFLPVNPEYSATR VWLATQNHSTLVTERSAVPFLPVNPEYSAT AVPFLPVNPEYSATRNQGRQKLARFNAREF R S A T R N 2 1 1 0 0 0 1 0 0 0 1 0 0 1 3 2 1 0 1 2 0 0 16 0 1746.8941 Q9Y2X7 Q9Y2X7 310 325 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 0.028619 76.728 By MS/MS 4.5 0.5 1 1 2 2385200 2385200 0 11897 2848 12645 30000;30001 23898 23898 1 183280 0 SAVPPGADKKAEAGAGSATEFQFR ARLTRGEADRDTYRRSAVPPGADKKAEAGA KAEAGAGSATEFQFRGGFGRGRGQPPQ___ R S A F R G 6 1 0 1 0 1 2 3 0 0 0 2 0 2 2 2 1 0 0 1 0 0 24 2 2391.1819 P46783 P46783 130 153 RPS10 40S ribosomal protein S10 yes yes 3;4 8.0019E-05 96.881 By MS/MS 9.5 0.5 2 2 4 21758000 21758000 0 11898 920 12646 30002;30003;30004;30005 23899;23900;23901;23902;23903 23900 5 457900 0 SAVQKPPSTGSAPAIESVD RALGAHLEAEPKSQRSAVQKPPSTGSAPAI KPPSTGSAPAIESVD_______________ R S A V D - 3 0 0 1 0 1 1 1 0 1 0 1 0 0 3 4 1 0 0 2 0 0 19 1 1839.9214 Q9NUQ3 Q9NUQ3 510 528 TXLNG Gamma-taxilin yes yes 2 0.00088908 125.47 By MS/MS 5.5 0.5 1 1 2 3330700 3330700 0 11899 2584 12647 30006;30007 23904 23904 1 30002 0 SAYDSTMETMNYAQIR KHPEVDVLINFASLRSAYDSTMETMNYAQI AYDSTMETMNYAQIRTIAIIAEGIPEALTR R S A I R T 2 1 1 1 0 1 1 0 0 1 0 0 2 0 0 2 2 0 2 0 0 0 16 0 1879.808 P53396 P53396 577 592 ACLY ATP-citrate synthase yes yes 2 4.0105E-33 304.38 By MS/MS 4 0 1 1 1740100 1740100 0 11900 1030 12648 30008 23905 23905 1 163750 0 SAYEEQR YFERAKRLEEIPLIKSAYEEQRIKDMDLWE LEEIPLIKSAYEEQRIKDMDLWEQQEEERI K S A Q R I 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 7 0 881.38791 Q14152 Q14152 712 718 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.013192 127.12 By MS/MS 3 0.816 1 1 1 3 2901600 2901600 0 11901 1422 12649 30009;30010;30011 23906;23907 23906 2 313290 0 SAYESQPIR PELQVAFADCAADIKSAYESQPIRQTAQDW CAADIKSAYESQPIRQTAQDWPATSLNCIA K S A I R Q 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1049.5142 Q96EY7 Q96EY7 557 565 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.00078147 138.06 By MS/MS By MS/MS 6.6 1.62 2 1 1 1 4 1 8448500 8327500 120970 11902 2151 12650 30012;30013;30014;30015;30016 23908;23909;23910 23909 3 85270 101590 SAYNVYVAER KKKELTLLGKPKRPRSAYNVYVAERFQEAK PKRPRSAYNVYVAERFQEAKGDSPQEKLKT R S A E R F 2 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 2 2 0 0 10 0 1170.5669 Q00059 Q00059 160 169 TFAM Transcription factor A, mitochondrial yes yes 2 2.5472E-05 164.33 By MS/MS By matching 8.67 0.471 1 2 2 1 10623000 10503000 119490 11903 1258 12651 30017;30018;30019 23911;23912 23911 2 180490 272480 SCAAAGTECLISGWGNTK PATLNSRVATVSLPRSCAAAGTECLISGWG AAGTECLISGWGNTKSSGSSYPSLLQCLKA R S C T K S 3 0 1 0 2 0 1 3 0 1 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1881.8349 CON__P00761 CON__P00761 116 133 yes yes 2;3 3.4765E-104 432.09 By MS/MS By MS/MS 6 2.87 2 2 3 2 2 3 4 2 3 4 12 15 31643000 23167000 8475700 + 11904 37 12652 30020;30021;30022;30023;30024;30025;30026;30027;30028;30029;30030;30031;30032;30033;30034;30035;30036;30037;30038;30039;30040;30041;30042;30043;30044;30045;30046 23913;23914;23915;23916;23917;23918;23919;23920;23921;23922;23923;23924;23925;23926;23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939;23940;23941;23942;23943;23944 23916 32 929210 10311000 SCAEWVSLSK KYTAQVDAEEKEDVKSCAEWVSLSKARIVE KEDVKSCAEWVSLSKARIVEYEKEMEKMKN K S C S K A 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 3 0 1 0 1 0 0 10 0 1165.5438 O75947 O75947 100 109 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 5.7391E-05 156.83 By MS/MS 9 0 1 1 5763300 5763300 0 11905 356 12653 30047 23945 23945 1 113420 0 SCAGISGK LAAIVILLLKIWKTRSCAGISGKSQLLFAL LKIWKTRSCAGISGKSQLLFALVFTTRYLD R S C G K S 1 0 0 0 1 0 0 2 0 1 0 1 0 0 0 2 0 0 0 0 0 0 8 0 778.36434 P33947;P24390 P33947 28 35 KDELR2;KDELR1 ER lumen protein-retaining receptor 2;ER lumen protein-retaining receptor 1 yes no 2 0.017415 102.51 By MS/MS 2 0.816 1 1 1 3 1591600 1591600 0 11906 712 12654 30048;30049;30050 23946;23947 23946 2 421340 0 SCAHDWVYE EISLWFKPEELVDYKSCAHDWVYE______ ELVDYKSCAHDWVYE_______________ K S C Y E - 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 9 0 1165.4499 P22392;O60361 P22392 144 152 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 0.041903 79.451 By MS/MS 10 0 1 1 1126400 1126400 0 11907 692 12655 30051 23948 23948 1 60710 0 SCATFSSSHR EIFELDLSDPSLDMKSCATFSSSHRYHKLI SLDMKSCATFSSSHRYHKLIWGPYKMDSKG K S C H R Y 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 4 1 0 0 0 0 0 10 0 1138.4826 O94979 O94979 59 68 SEC31A Protein transport protein Sec31A yes yes 2 0.00046041 134.05 By MS/MS 3 0 1 1 238190 238190 0 11908 382 12656 30052 23949 23949 1 4358.1 0 SCDDVITGR VHAVLATGSGIVIIRSCDDVITGRHWLARE GIVIIRSCDDVITGRHWLAREYVWFLIPYM R S C G R H 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 1021.4499 Q8TBR7 Q8TBR7 61 69 FAM57A Protein FAM57A yes yes 2 0.053422 74.464 By MS/MS 1.5 0.5 1 1 2 382630 382630 0 11909 1985 12657 30053;30054 23950 23950 1 108020 0 SCDLLLFLR AFCALFDCDRPVAQKSCDLLLFLRDKIASY RPVAQKSCDLLLFLRDKIASYSSLREARGS K S C L R D 0 1 0 1 1 0 0 0 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 1135.606 Q6PJG6 Q6PJG6 719 727 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.00010744 160.75 By MS/MS 5 0 1 1 130480 130480 0 11910 1720 12658 30055 23951 23951 1 1308.6 0 SCDPGLEDPCGLNR SDVDAFIAYVGTDQKSCDPGLEDPCGLNRA KSCDPGLEDPCGLNRARMSFCVYSILGVVK K S C N R A 0 1 1 2 2 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 14 0 1588.661 Q9HAV4 Q9HAV4 705 718 XPO5 Exportin-5 yes yes 2 1.9459E-16 249.83 By MS/MS 3 0 1 1 2386200 2386200 0 11911 2495 12659 30056 23952 23952 1 43660 0 SCENLAPFNTALK GCSVTVPANVQRWMRSCENLAPFNTALKLL MRSCENLAPFNTALKLLK____________ R S C L K L 2 0 2 0 1 0 1 0 0 0 2 1 0 1 1 1 1 0 0 0 0 0 13 0 1463.7079 Q13155 Q13155 305 317 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 2.3415E-09 225.55 By MS/MS 8.67 1.25 1 1 1 3 11981000 11981000 0 11912 1360 12660 30057;30058;30059 23953;23954;23955 23954 3 197590 0 SCEVLFNPFDDIIPR DIDDDERPHNPHKIKSCEVLFNPFDDIIPR SCEVLFNPFDDIIPREIKRLKKEKPEEEVK K S C P R E 0 1 1 2 1 0 1 0 0 2 1 0 0 2 2 1 0 0 0 1 0 0 15 0 1820.8767 Q6UX04 Q6UX04 163 177 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 2 0.00058842 156 By MS/MS 6 0 1 1 88831 88831 0 11913 1732 12661 30060 23956;23957 23956 2 610.64 0 SCFGHPLAPQALEDVK LDQALSDEELNAFQKSCFGHPLAPQALEDV CFGHPLAPQALEDVKTVVCRNVAGGVREDR K S C V K T 2 0 0 1 1 1 1 1 1 0 2 1 0 1 2 1 0 0 0 1 0 0 16 0 1767.8614 Q8IXI1 Q8IXI1 215 230 RHOT2 Mitochondrial Rho GTPase 2 yes yes 3 0.021813 78.902 By MS/MS 5 0 1 1 1503500 1503500 0 11914 1876 12662 30061 23958 23958 1 15080 0 SCGSLLPELK RSGGLGGSHALLLLRSCGSLLPELKLEERT LLLLRSCGSLLPELKLEERTEFAHRIWDTL R S C L K L 0 0 0 0 1 0 1 1 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1102.5692 P42704 P42704 129 138 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00050786 133.13 By MS/MS By matching 2.8 0.4 1 4 4 1 6743700 6605700 137970 11915 886 12663 30062;30063;30064;30065;30066 23959;23960;23961;23962;23963;23964 23960 6 154740 17562 SCGSLLPELKLEER RSGGLGGSHALLLLRSCGSLLPELKLEERT RSCGSLLPELKLEERTEFAHRIWDTLQKLG R S C E R T 0 1 0 0 1 0 3 1 0 0 4 1 0 0 1 2 0 0 0 0 0 0 14 1 1629.8396 P42704 P42704 129 142 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.030587 67.952 By MS/MS 4 0.816 1 1 1 3 1842400 1842400 0 11916 886 12664 30067;30068;30069 23965 23965 1 85640 0 SCGSSTPDEFPTDIPGTK YKLDDPSCPRPECYRSCGSSTPDEFPTDIP SSTPDEFPTDIPGTKGNFKLVRHVSFVDCP R S C T K G 0 0 0 2 1 0 1 2 0 1 0 1 0 1 3 3 3 0 0 0 0 0 18 0 1894.8255 P41091 P41091 104 121 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 2 5.7354E-05 190.24 By MS/MS 5.67 3.2 1 1 1 1 1 1 6 12650000 12650000 0 11917 866 12665 30070;30071;30072;30073;30074;30075 23966;23967;23968;23969;23970 23968 5 202760 0 SCHLAMAPNHAVVSR LLCLDGKRKPVTEARSCHLAMAPNHAVVSR SCHLAMAPNHAVVSRMDKVERLKQVLLHQQ R S C S R M 3 1 1 0 1 0 0 0 2 0 1 0 1 0 1 2 0 0 0 2 0 0 15 0 1648.7926 P02788 P02788 607 621 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 3 0.016731 88.78 By MS/MS 1 0 1 1 88654 0 88654 11918 459 12666 30076 23971 23971 173 1 0 88654 SCHTAVELFK YNLAQMHASGTGVMRSCHTAVELFKNVCER TGVMRSCHTAVELFKNVCERGRWSERLMTA R S C F K N 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 1 1 0 0 1 0 0 10 0 1190.5754 Q9UBV2 Q9UBV2 538 547 SEL1L Protein sel-1 homolog 1 yes yes 3 0.014339 101.66 By MS/MS 4 0 1 1 634310 634310 0 11919 2706 12667 30077 23972 23972 1 59693 0 SCLDYQTQETK QPSHMEAAHFGDLGRSCLDYQTQETKSSLS DLGRSCLDYQTQETKSSLSKTLEQVLHDTI R S C T K S 0 0 0 1 1 2 1 0 0 0 1 1 0 0 0 1 2 0 1 0 0 0 11 0 1371.5976 O43572 O43572 109 119 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 2 1.3881E-05 169.58 By MS/MS 5 0 1 1 290720 290720 0 11920 218 12668 30078 23973;23974 23974 2 2915.8 0 SCNCLLLK TVTNPKRIAKAVNEKSCNCLLLKVNQIGSV AKAVNEKSCNCLLLKVNQIGSVTESLQACK K S C L K V 0 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 1006.494 P06733 P06733 336 343 ENO1 Alpha-enolase yes yes 2 0.00036581 161.9 By MS/MS 6 0 1 1 3911400 3911400 0 11921 500 12669 30079 23975 23975 1 26888 0 SCPFADVAPLQLK ______________________________ KRSCPFADVAPLQLKVRVSQRELSRGVCAE R S C L K V 2 0 0 1 1 1 0 0 0 0 2 1 0 1 2 1 0 0 0 1 0 0 13 0 1444.7384 O15304 O15304 5 17 SIVA1 Apoptosis regulatory protein Siva yes yes 2 0.0057686 103.08 By MS/MS 10 0 1 1 83955 83955 0 11922 180 12670 30080 23976 23976 1 4524.9 0 SCQEILAHQK QSAKPRLDCLIEVYRSCQEILAHQKATSTS IEVYRSCQEILAHQKATSTSP_________ R S C Q K A 1 0 0 0 1 2 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1212.5921 Q14442 Q14442 173 182 PIGH Phosphatidylinositol N-acetylglucosaminyltransferase subunit H yes yes 2 0.00015117 148.94 By MS/MS 9 0 1 1 0 0 0 11923 1439 12671 30081 23977 23977 1 0 0 SCQEVFDKLAR AVPDPREPGEFALLRSCQEVFDKLARVAQP ALLRSCQEVFDKLARVAQPGINYALGTNVS R S C A R V 1 1 0 1 1 1 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 1 1351.6554 O43505 O43505 181 191 B4GAT1 Beta-1,4-glucuronyltransferase 1 yes yes 3 0.026946 110.93 By MS/MS 6.5 0.5 1 1 2 4169400 4169400 0 11924 216 12672 30082;30083 23978 23978 1 34096 0 SCQFVAVR KGVPIRLEVGPRDMKSCQFVAVRRDTGEKL VGPRDMKSCQFVAVRRDTGEKLTVAENEAE K S C V R R 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 8 0 965.47529 P07814 P07814 1376 1383 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0019304 143.89 By MS/MS 4.33 2.62 1 1 1 3 16375000 16375000 0 11925 512 12673 30084;30085;30086 23979;23980;23981 23980 3 294020 0 SCQISCK ______________________________ ______________________________ M S C C K S 0 0 0 0 2 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 7 0 881.37352 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 2 8 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.011386 131.03 By MS/MS By MS/MS 5.44 3 2 1 2 2 2 1 1 1 2 2 6 10 49305000 9840700 39464000 + 11926 55 12674 30087;30088;30089;30090;30091;30092;30093;30094;30095;30096;30097;30098;30099;30100;30101;30102 23982;23983;23984;23985;23986;23987;23988;23989;23990;23991;23992;23993;23994;23995;23996 23987 15 659110 46249000 SCQISCKSR ______________________________ ______________________________ M S C S R G 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 9 1 1124.5067 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 2 10 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 5.6005E-05 168.25 By MS/MS By MS/MS 5.56 3 2 2 1 1 1 2 2 2 1 2 8 8 41921000 15405000 26516000 + 11927 55 12675 30103;30104;30105;30106;30107;30108;30109;30110;30111;30112;30113;30114;30115;30116;30117;30118 23997;23998;23999;24000;24001;24002;24003;24004;24005;24006;24007;24008;24009;24010;24011 23998 15 1413200 37653000 SCRQFSSSYLSR ______________________________ ______________________________ M S C S R S 0 2 0 0 1 1 0 0 0 0 1 0 0 1 0 5 0 0 1 0 0 0 12 1 1476.678 P35527;CON__P35527 P35527 2 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 2.188E-28 259.35 By MS/MS By MS/MS 5.43 2.9 1 2 2 1 1 1 2 2 2 5 9 21176000 6365500 14811000 + 11928 822 12676 30119;30120;30121;30122;30123;30124;30125;30126;30127;30128;30129;30130;30131;30132 24012;24013;24014;24015;24016;24017;24018;24019;24020;24021;24022;24023;24024 24014 13 385240 17394000 SCSGVEFSTSGSSNTDTGK KGFGFGLVKLDVKTKSCSGVEFSTSGSSNT VEFSTSGSSNTDTGKVTGTLETKYKWCEYG K S C G K V 0 0 1 1 1 0 1 3 0 0 0 1 0 1 0 6 3 0 0 1 0 0 19 0 1906.7851 P45880 P45880 46 64 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 1.1219E-24 275.66 By MS/MS By MS/MS 8 0 2 1 1 1957800 1912100 45702 11929 903 12677 30133;30134 24025;24026 24026 2 24140 61672 SCSLVLEHQPDNIK AASQLKLDHYRAALRSCSLVLEHQPDNIKA RSCSLVLEHQPDNIKALFRKGKVLAQQGEY R S C I K A 0 0 1 1 1 1 1 0 1 1 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1638.8036 Q14318 Q14318 294 307 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2;3 5.3935E-12 246.56 By MS/MS 6 0 2 2 15582000 15582000 0 11930 1438 12678 30135;30136 24027;24028 24028 2 107110 0 SCTEGKGEYTMEYSR DVPLNDMFGYSTELRSCTEGKGEYTMEYSR SCTEGKGEYTMEYSRYQPCLPSTQEDVINK R S C S R Y 0 1 0 0 1 0 3 2 0 0 0 1 1 0 0 2 2 0 2 0 0 0 15 1 1796.7345 Q96RP9 Q96RP9 705 719 GFM1 Elongation factor G, mitochondrial yes yes 2;3 0.0066164 124.16 By MS/MS 5 0 3 3 2289000 2289000 0 11931 2223 12679;12680 30137;30138;30139 24029;24030;24031 24031 1038 3 22957 0 SDASPSSIR PSGEEVLQDIQVMLKSDASPSSIRSLKSDM IQVMLKSDASPSSIRSLKSDMMSHLVKIPG K S D I R S 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 4 0 0 0 0 0 0 9 0 918.44067 P33992 P33992 130 138 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.044063 78.516 By MS/MS By matching 3.67 0.471 1 2 1 2 2318000 2077700 240330 11932 807 12681 30140;30141;30142 24032 24032 1 195520 85932 SDATADDLIDVVEGNR ILAEYKIHNADVTLRSDATADDLIDVVEGN DATADDLIDVVEGNRVYIPCIYVLNKIDQI R S D N R V 2 1 1 4 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1688.7853 Q9Y295 Q9Y295 223 238 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 3.0709E-44 333.03 By MS/MS 7 0 1 1 638620 638620 0 11933 2822 12682 30143 24033 24033 1 10025 0 SDAYYCTGDVTAWTK ALLPCEECSGQLVFKSDAYYCTGDVTAWTK SDAYYCTGDVTAWTKCMVKTQTPNRKEWVT K S D T K C 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 1 3 1 2 1 0 0 15 0 1736.7352 P09874 P09874 306 320 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 5.4664E-11 234.79 By MS/MS 3.5 0.5 1 1 2 2477400 2477400 0 11934 543 12683 30144;30145 24034 24034 1 225610 0 SDCKEFSSEAR ASGVRTGTKIIIHLKSDCKEFSSEARVRDV IHLKSDCKEFSSEARVRDVVTKYSNFVSFP K S D A R V 1 1 0 1 1 0 2 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 11 1 1314.551 Q12931 Q12931 259 269 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.0044379 123.62 By MS/MS 5 0 2 2 4006800 4006800 0 11935 1340 12684 30146;30147 24035;24036 24036 2 40186 0 SDEAVKPFGLK LSLMRLDRFRDSILRSDEAVKPFGLKVSQL SILRSDEAVKPFGLKVSQLLLSTDESTFDD R S D L K V 1 0 0 1 0 0 1 1 0 0 1 2 0 1 1 1 0 0 0 1 0 0 11 1 1189.6343 P49327 P49327 523 533 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 6.6387E-05 168.26 By MS/MS By matching 2.77 1.53 3 4 2 2 1 1 11 2 75020000 74924000 95708 11936 946 12685 30148;30149;30150;30151;30152;30153;30154;30155;30156;30157;30158;30159;30160 24037;24038;24039;24040;24041;24042;24043;24044;24045 24039 8 14217000 119540 SDEISFADFK PLEKGIFTSGTWEEKSDEISFADFKFSVTH TWEEKSDEISFADFKFSVTHHYLVQESTDK K S D F K F 1 0 0 2 0 0 1 0 0 1 0 1 0 2 0 2 0 0 0 0 0 0 10 0 1157.5241 Q15042 Q15042 62 71 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 2.77E-05 162.88 By MS/MS 3 0 1 1 122100 122100 0 11937 1479 12686 30161 24046 24046 1 2234 0 SDESDQQESLHK VLKIIREEYGRLHGRSDESDQQESLHKLLT HGRSDESDQQESLHKLLTSGGLNEDFSFHY R S D H K L 0 0 0 2 0 2 2 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 12 0 1401.6008 P49770 P49770 100 111 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 2 3.4234E-09 215.72 By MS/MS 7 0 1 1 459730 459730 0 11938 963 12687 30162 24047 24047 1 7216.9 0 SDESYTPSK RKTTVKTLCIYADYKSDESYTPSKISVRVG IYADYKSDESYTPSKISVRVGNNFHNLQEI K S D S K I 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 3 1 0 1 0 0 0 9 0 1012.4349 Q9UM13 Q9UM13 85 93 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 2 0.0012025 131.44 By MS/MS 9 0 1 1 252330 252330 0 11939 2780 12688 30163 24048 24048 1 4965.9 0 SDEVFSTTLAYTK ______________________________ ______________________________ M S D T K S 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 2 3 0 1 1 0 0 13 0 1460.7035 Q49MG5 Q49MG5 2 14 MAP9 Microtubule-associated protein 9 yes yes 2 0.0007943 131.42 By MS/MS 4 0 1 1 360230 360230 0 11940 1581 12689 30164 24049 24049 1 33900 0 SDFEFTLK IPRVIQLLFKEIDKKSDFEFTLKVSYLEIY FKEIDKKSDFEFTLKVSYLEIYNEEILDLL K S D L K V 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 8 0 985.47566 O95239;Q2VIQ3 O95239 130 137 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.031049 89.698 By MS/MS 3 0 1 1 112220 112220 0 11941 397 12690 30165 24050 24050 1 2053.2 0 SDFFLEGPFMPPR DLGVFIPAPMAQGMRSDFFLEGPFMPPRMK MRSDFFLEGPFMPPRMKMDRDPLGGLADMF R S D P R M 0 1 0 1 0 0 1 1 0 0 1 0 1 3 3 1 0 0 0 0 0 0 13 0 1538.7228 P78344 P78344 348 360 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00014976 167.67 By MS/MS 4.5 0.5 1 1 2 278120 278120 0 11942 1219 12691 30166;30167 24051 24051 708 1 21783 0 SDFQVNLNNASR YKELRKPLEKEGWKKSDFQVNLNNASRSQS WKKSDFQVNLNNASRSQSSHSYDDSTLPLI K S D S R S 1 1 3 1 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 12 0 1363.648 O60716 O60716 847 858 CTNND1 Catenin delta-1 yes yes 2 3.2167E-05 173.04 By MS/MS 4 0 1 1 4093600 4093600 0 11943 272 12692 30168 24052 24052 1 385240 0 SDGALLLGASSLSGR APACMERQLEAARYRSDGALLLGASSLSGR SDGALLLGASSLSGRCWAGSLWLFKDPCAA R S D G R C 2 1 0 1 0 0 0 3 0 0 4 0 0 0 0 4 0 0 0 0 0 0 15 0 1402.7416 Q9BQA1 Q9BQA1 38 52 WDR77 Methylosome protein 50 yes yes 2 1.9574E-15 221.8 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 3 2 5657700 5250800 406890 11944 2286 12693 30169;30170;30171;30172;30173 24053;24054 24053 2 84255 707120 SDGGYTYDTSDLAAIK IVFVPGCSIPLTIVKSDGGYTYDTSDLAAI DGGYTYDTSDLAAIKQRLFEEKADMIIYVV K S D I K Q 2 0 0 3 0 0 0 2 0 1 1 1 0 0 0 2 2 0 2 0 0 0 16 0 1675.7577 P54136 P54136 378 393 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 1.1521E-43 318.57 By MS/MS 5 0 1 1 10742000 10742000 0 11945 1043 12694 30174 24055;24056;24057 24056 3 107740 0 SDGGYTYDTSDLAAIKQR IVFVPGCSIPLTIVKSDGGYTYDTSDLAAI GYTYDTSDLAAIKQRLFEEKADMIIYVVDN K S D Q R L 2 1 0 3 0 1 0 2 0 1 1 1 0 0 0 2 2 0 2 0 0 0 18 1 1959.9174 P54136 P54136 378 395 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 4.4562E-05 205.31 By MS/MS 5 0 1 1 1559000 1559000 0 11946 1043 12695 30175 24058 24058 1 15636 0 SDGIYIINLK TNLDFQMEQYIYKRKSDGIYIINLKRTWEK IYKRKSDGIYIINLKRTWEKLLLAARAIVA K S D L K R 0 0 1 1 0 0 0 1 0 3 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1134.6285 P08865 P08865 43 52 RPSA 40S ribosomal protein SA yes yes 2 1.6348E-10 210.37 By MS/MS 8.2 1.17 2 1 1 1 5 13978000 13978000 0 11947 529 12696 30176;30177;30178;30179;30180 24059;24060;24061;24062;24063 24059 5 227460 0 SDGIYIINLKR TNLDFQMEQYIYKRKSDGIYIINLKRTWEK YKRKSDGIYIINLKRTWEKLLLAARAIVAI K S D K R T 0 1 1 1 0 0 0 1 0 3 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1290.7296 P08865 P08865 43 53 RPSA 40S ribosomal protein SA yes yes 2;3 3.8092E-06 189.38 By MS/MS 8.2 1.17 2 1 1 1 5 22257000 22257000 0 11948 529 12697 30181;30182;30183;30184;30185 24064;24065;24066;24067 24064 3 356870 0 SDGSLEDGDDVHR LTSDESTLIEDGGARSDGSLEDGDDVHRAV ARSDGSLEDGDDVHRAVDNERDGVTYSYSF R S D H R A 0 1 0 4 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1400.5804 Q9NRX5 Q9NRX5 361 373 SERINC1 Serine incorporator 1 yes yes 2;3 0.00011798 178.54 By MS/MS 6.67 3.3 1 2 3 1737200 1737200 0 11949 2563 12698 30186;30187;30188 24068;24069;24070 24070 3 114690 0 SDHLIQTDTVNLHR AFEEAVRRVLATEDRSDHLIQTDTVNLHRK RSDHLIQTDTVNLHRKPKPSSSCC______ R S D H R K 0 1 1 2 0 1 0 0 2 1 2 0 0 0 0 1 2 0 0 1 0 0 14 0 1647.8329 P51151 P51151 179 192 RAB9A Ras-related protein Rab-9A yes yes 3 4.5243E-11 230.96 By MS/MS 9 0 1 1 1335900 1335900 0 11950 991 12699 30189 24071 24071 1 26291 0 SDIDEIVLVGGSTR MKPVQKVLEDSDLKKSDIDEIVLVGGSTRI KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K S D T R I 0 1 0 2 0 0 1 2 0 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1459.7518 P11021 P11021 354 367 HSPA5 78 kDa glucose-regulated protein yes yes 2 6.2875E-05 206.97 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 16390000 16256000 133430 11951 571 12700 30190;30191;30192 24072;24073;24074;24075 24072 4 162000 112050 SDIGEVILVGGMTR IAPCQKAMQDAEVSKSDIGEVILVGGMTRM KSDIGEVILVGGMTRMPKVQQTVQDLFGRA K S D T R M 0 1 0 1 0 0 1 3 0 2 1 0 1 0 0 1 1 0 0 2 0 0 14 0 1445.7548 P38646 P38646 378 391 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.3227E-24 280.38 By MS/MS By matching 5.25 0.433 3 1 3 1 11671000 11586000 84634 11952 850 12701;12702 30193;30194;30195;30196 24076;24077 24077 433 2 113870 71074 SDKETEKGASR LCRMMKHSMDQTGSKSDKETEKGASRIDEK TGSKSDKETEKGASRIDEKSSKAKVNDFLA K S D S R I 1 1 0 1 0 0 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 11 2 1206.584 Q14008 Q14008 1809 1819 CKAP5 Cytoskeleton-associated protein 5 yes yes 2;3 0.0014633 145.23 By MS/MS 2 0 2 2 125340 125340 0 11953 1417 12703 30197;30198 24078;24079 24078 2 42397 0 SDKGDFYKR TTERPVQVKVVKVKKSDKGDFYKRQIAWAL VVKVKKSDKGDFYKRQIAWALRDLAVVDAK K S D K R Q 0 1 0 2 0 0 0 1 0 0 0 2 0 1 0 1 0 0 1 0 0 0 9 2 1114.5407 Q9NV70 Q9NV70 58 66 EXOC1 Exocyst complex component 1 yes yes 3 0.03377 96.665 By MS/MS 4 0 1 1 515920 515920 0 11954 2589 12704 30199 24080 24080 1 48551 0 SDKLPYK ______________________________ ______________________________ M S D Y K V 0 0 0 1 0 0 0 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 7 1 849.45962 P23526 P23526 2 8 AHCY Adenosylhomocysteinase yes yes 2 0.016618 116.9 By MS/MS 7 0 1 1 2340500 2340500 0 11955 706 12705 30200 24081 24081 1 36742 0 SDKSELKAELER ______________________________ ______________________________ M S D E R K 1 1 0 1 0 0 3 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 12 2 1403.7256 Q13409 Q13409 2 13 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2;3 2.8585E-08 205.02 By MS/MS 5 0 2 2 7638100 7638100 0 11956 1379 12706 30201;30202 24082;24083 24083 2 76606 0 SDKSPDLAPTPAPQSTPR QRKHEAKKAAKQEARSDKSPDLAPTPAPQS SPDLAPTPAPQSTPRNTVSQSISGDPEIDK R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 Q9BY44 Q9BY44 503 520 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 3 0.0070192 86.005 By MS/MS 6 0 1 1 463890 463890 0 11957 2364 12707 30203 24084 24084 1 3188.9 0 SDLGNLLK YVSALQYNPDLYCVRSDLGNLLKALGRLEE PDLYCVRSDLGNLLKALGRLEEAKACYLKA R S D L K A 0 0 1 1 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 858.48108 O15294 O15294 161 168 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.018237 101.6 By MS/MS 4 0 1 1 587040 587040 0 11958 179 12708 30204 24085 24085 1 55244 0 SDLIEVATR LKSCDGNQELLNFLRSDLIEVATRLQKGGL LLNFLRSDLIEVATRLQKGGLGYVEETSEF R S D T R L 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1002.5346 Q9UIG0 Q9UIG0 1057 1065 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.035267 94.692 By MS/MS 2.5 0.5 1 1 2 582720 582720 0 11959 2742 12709 30205;30206 24086;24087 24086 0 145780 0 SDLLLEGFNNYR HIFYQLLSGAGEHLKSDLLLEGFNNYRFLS HLKSDLLLEGFNNYRFLSNGYIPIPGQQDK K S D Y R F 0 1 2 1 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 0 0 0 12 0 1439.7045 P35580 P35580 297 308 MYH10 Myosin-10 yes yes 2 6.1676E-06 204.52 By MS/MS 2 0 1 1 217780 217780 0 11960 825 12710 30207 24088;24089 24089 2 73663 0 SDLLLSGR FIQEPAKNRPGPQTRSDLLLSGRDWNTLIV RPGPQTRSDLLLSGRDWNTLIVGKLSPWIR R S D G R D 0 1 0 1 0 0 0 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 8 0 859.47633 O14744 O14744 69 76 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.011599 119.29 By MS/MS By MS/MS 5 0 2 1 1 2703300 1596100 1107200 11961 137 12711 30208;30209 24090;24091 24090 2 16008 929830 SDPDPKAPANK ITNGGKANWYFLLARSDPDPKAPANKAFTG LLARSDPDPKAPANKAFTGFIVEADTPGIQ R S D N K A 2 0 1 2 0 0 0 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 1 1138.5619 P11310 P11310 207 217 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.038268 96.665 By MS/MS 7 0 1 1 1076500 1076500 0 11962 577 12712 30210 24092 24092 1 16899 0 SDPGLLTNTMDVFVK GLMYSIMVHALRAFRSDPGLLTNTMDVFVK SDPGLLTNTMDVFVKEPSFDWKNFEQKMLK R S D V K E 0 0 1 2 0 0 0 1 0 0 2 1 1 1 1 1 2 0 0 2 0 0 15 0 1635.8178 P78527 P78527 3993 4007 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00050056 148.78 By MS/MS 1.67 0.471 1 2 3 204440 204440 0 11963 1225 12713;12714 30211;30212;30213 24093;24094;24095 24094 731 3 58995 0 SDPTSYAGYIEDLKK VFPKPVTALEYTFSRSDPTSYAGYIEDLKK SDPTSYAGYIEDLKKFLKPYTLEEQKNLTV R S D K K F 1 0 0 2 0 0 1 1 0 1 1 2 0 0 1 2 1 0 2 0 0 0 15 1 1685.8148 P54709 P54709 98 112 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 2 0.0011809 154.28 By MS/MS 8 0.816 1 1 1 3 2865500 2865500 0 11964 1047 12715 30214;30215;30216 24096;24097 24096 2 41407 0 SDPVVSYR LKDLEEDHACIPIKKSDPVVSYRETVSEES ACIPIKKSDPVVSYRETVSEESNVLCLSKS K S D Y R E 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 2 0 0 1 2 0 0 8 0 921.4556 P13639 P13639 573 580 EEF2 Elongation factor 2 yes yes 2 0.049281 82.75 By MS/MS By matching 4.75 0.829 2 1 1 3 1 14335000 14256000 78639 11965 602 12716 30217;30218;30219;30220 24098 24098 1 1074500 167550 SDQDYILK SISVNNCVCHFSPLKSDQDYILKEGDLVKI CHFSPLKSDQDYILKEGDLVKIDLGVHVDG K S D L K E 0 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 8 0 980.48148 Q9UQ80 Q9UQ80 94 101 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0053054 124.08 By MS/MS 7 0 1 1 470250 470250 0 11966 2805 12717 30221 24099 24099 1 7382.1 0 SDQNLQTALELTR RACWVLHYFCEVKFKSDQNLQTALELTRRC FKSDQNLQTALELTRRCLIDDREMPVKVEA K S D T R R 1 1 1 1 0 2 1 0 0 0 3 0 0 0 0 1 2 0 0 0 0 0 13 0 1487.758 O95373 O95373 490 502 IPO7 Importin-7 yes yes 2 1.5072E-24 286.19 By MS/MS 4 0.816 1 1 1 3 3022500 3022500 0 11967 406 12718 30222;30223;30224 24100;24101 24100 2 209470 0 SDQQLDCALDLMR ______________________________ ______________________________ M S D M R R 1 1 0 3 1 2 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 13 0 1563.7021 P47756 P47756 2 14 CAPZB F-actin-capping protein subunit beta yes yes 2 0.0018644 114.24 By MS/MS 8 0 1 1 69883 69883 0 11968 926 12719 30225 24102;24103 24102 2 882.26 0 SDQSRLDSELK ESFINNLRRRVDQLKSDQSRLDSELKNMQD DQLKSDQSRLDSELKNMQDMVEDYRNKYED K S D L K N 0 1 0 2 0 1 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1276.6259 CON__P04264;P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 247 257 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.00040052 147.62 By MS/MS By MS/MS 5.9 2.67 2 1 1 2 3 3 2 3 2 2 8 13 23788000 11261000 12527000 + 11969 471;45;34 12720 30226;30227;30228;30229;30230;30231;30232;30233;30234;30235;30236;30237;30238;30239;30240;30241;30242;30243;30244;30245;30246 24104;24105;24106;24107;24108;24109;24110 24107 7 621760 4768300 SDQSYVISFVVPNQK LKNCPLIDNICAFAKSDQSYVISFVVPNQK SDQSYVISFVVPNQKRLTLLAQQKGVEGTW K S D Q K R 0 0 1 1 0 2 0 0 0 1 0 1 0 1 1 3 0 0 1 3 0 0 15 0 1709.8625 O60488 O60488 607 621 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 8.3255E-05 185.57 By MS/MS 5 0 1 1 306770 306770 0 11970 257 12721 30247 24111 24111 1 3076.7 0 SDQWKPLNLEEK NAENIQPGEQKYEYKSDQWKPLNLEEKKRY EYKSDQWKPLNLEEKKRYDREFLLGFQFIF K S D E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 1 1 0 1 0 0 0 0 12 1 1485.7464 Q04637 Q04637 598 609 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 2.1767E-05 189.57 By MS/MS 2.71 1.03 1 2 2 2 7 8896400 8896400 0 11971 1291 12722 30248;30249;30250;30251;30252;30253;30254 24112;24113;24114 24113 3 2503900 0 SDRHNLLQACK QKEVTAIETKLEQKRSDRHNLLQACKMQDI EQKRSDRHNLLQACKMQDIKLPLSKGTMDD R S D C K M 1 1 1 1 1 1 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 1 1340.6619 Q14683 Q14683 924 934 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.021237 98.754 By MS/MS 3 0 1 1 498530 498530 0 11972 1451 12723 30255 24115;24116 24116 2 9121.6 0 SDRPELTGAK SPVEISEWLDQKLTKSDRPELTGAKVVVSG QKLTKSDRPELTGAKVVVSGGRGLKSGENF K S D A K V 1 1 0 1 0 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 1 1072.5513 P13804 P13804 207 216 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 3 0.00037106 164.66 By MS/MS 8 0 1 1 1672200 1672200 0 11973 606 12724 30256 24117 24117 1 21112 0 SDSEATISR LAQPRRTRLGSLSARSDSEATISRSSASSR GSLSARSDSEATISRSSASSRTAEAIIRSG R S D S R S 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 964.44615 Q5SW79 Q5SW79 1165 1173 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.00050043 146.69 By MS/MS 2 0 1 1 1050700 1050700 0 11974 1623 12725 30257 24118 24118 1 355390 0 SDSEKLNLDSIIGR ______________________________ MSDSEKLNLDSIIGRLLEVQGSRPGKNVQL M S D G R L 0 1 1 2 0 0 1 1 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1545.7999 P62136 P62136 2 15 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 7.6545E-33 296.28 By MS/MS 8.5 1.12 1 1 1 1 4 3959700 3959700 0 11975 1139 12726 30258;30259;30260;30261 24119;24120;24121;24122 24119 4 58454 0 SDSFENPVLQQHFR GKMKAIVEKLRFTYRSDSFENPVLQQHFRN RSDSFENPVLQQHFRNLEALALDLMEPEQA R S D F R N 0 1 1 1 0 2 1 0 1 0 1 0 0 2 1 2 0 0 0 1 0 0 14 0 1702.8063 P12956 P12956 475 488 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 3.876E-07 206.36 By MS/MS 5 0 1 1 2754100 2754100 0 11976 596 12727 30262 24123 24123 1 27622 0 SDSGGSSSEPFDR YPPGVHPSGLVPRERSDSGGSSSEPFDRHA ERSDSGGSSSEPFDRHAPAMLRERGTPPVD R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 0.00034543 147.62 By MS/MS 2 0 1 1 383080 383080 0 11977 938 12728 30263 24124 24124 1 129570 0 SDSRAQAVSEDAGGNEGR PAQGEAPGEQARDERSDSRAQAVSEDAGGN RAQAVSEDAGGNEGRAAEAEPRALENGDAD R S D G R A 3 2 1 2 0 1 2 3 0 0 0 0 0 0 0 3 0 0 0 1 0 0 18 1 1804.7936 P55884 P55884 117 134 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.0011861 147.49 By MS/MS 4 0 2 2 2460100 2460100 0 11978 1065 12729 30264;30265 24125;24126 24126 2 231510 0 SDTIDTVSVPYVFR SAMRNRKYNCTLCSRSDTIDTVSVPYVFRY RSDTIDTVSVPYVFRYFVAELAAMNIKVKL R S D F R Y 0 1 0 2 0 0 0 0 0 1 0 0 0 1 1 2 2 0 1 3 0 0 14 0 1597.7988 Q9H9Y6 Q9H9Y6 1104 1117 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 2 0.0034063 108.47 By MS/MS 4 0 1 1 303680 303680 0 11979 2490 12730 30266 24127 24127 1 28578 0 SDTPLIYK LVATTFTHSYPFCWRSDTPLIYKAVPSWFV SYPFCWRSDTPLIYKAVPSWFVRVENMVDQ R S D Y K A 0 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 8 0 935.4964 P41252 P41252 403 410 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.043599 84.916 By MS/MS 3.5 0.5 1 1 2 6404000 6404000 0 11980 871 12731 30267;30268 24128 24128 1 196360 0 SDTQLVVR VERRNRVLAGLYMGRSDTQLVVRQASLHVW AGLYMGRSDTQLVVRQASLHVWKIVVSNTP R S D V R Q 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 8 0 916.49779 Q92616 Q92616 1894 1901 GCN1L1 Translational activator GCN1 yes yes 2 0.0014033 148.99 By MS/MS 2.5 1.12 1 1 1 1 4 4876900 4876900 0 11981 2064 12732 30269;30270;30271;30272 24129;24130;24131;24132 24130 4 1248500 0 SDTSESGAGLTR ______________________________ ______________________________ M S D T R F 1 1 0 1 0 0 1 2 0 0 1 0 0 0 0 3 2 0 0 0 0 0 12 0 1179.5368 Q9UNF1 Q9UNF1 2 13 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.0095176 93.442 By MS/MS 5 0 1 1 660670 660670 0 11982 2787 12733 30273 24133 24133 1 6626.2 0 SDTSLTWNSVK DRPVEGYLAVAVVRRSDTSLTWNSVKGKKS VVRRSDTSLTWNSVKGKKSCHTAVDRTAGW R S D V K G 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 3 2 1 0 1 0 0 11 0 1236.5986 P02788 P02788 463 473 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.0015111 135.86 By MS/MS 1 0 1 1 76785 0 76785 11983 459 12734 30274 24134 24134 1 0 76785 SDVEAIFSK SRVFIGNLNTLVVKKSDVEAIFSKYGKIVG TLVVKKSDVEAIFSKYGKIVGCSVHKGFAF K S D S K Y 1 0 0 1 0 0 1 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 9 0 994.49713 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 31 39 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.0014431 128.38 By MS/MS 7 0 1 1 2850600 2850600 0 11984 514 12735 30275 24135 24135 1 44749 0 SDVKKEEK KDRKEDKEKDKDKEKSDVKKEEKKEKK___ KDKDKEKSDVKKEEKKEKK___________ K S D E K K 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 0 1 0 0 8 2 961.50803 P51665 P51665 313 320 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 0.0066256 154.12 By MS/MS 7 0 1 1 294790 294790 0 11985 1005 12736 30276 24136 24136 1 4627.7 0 SDYDGIGSR DRGSGSRGRFDDRGRSDYDGIGSRGDRSGF FDDRGRSDYDGIGSRGDRSGFGKFERGGNS R S D S R G 0 1 0 2 0 0 0 2 0 1 0 0 0 0 0 2 0 0 1 0 0 0 9 0 968.41994 O00571 O00571 102 110 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.011601 97.635 By MS/MS By matching 7.25 2.28 2 1 1 3 1 4382200 4323200 58975 11986 116 12737 30277;30278;30279;30280 24137;24138 24137 2 49405 49526 SDYDMVDYLNELR VLNTLQQASQAQVDKSDYDMVDYLNELRES DKSDYDMVDYLNELRESCLEAYTGIVQGLK K S D L R E 0 1 1 3 0 0 1 0 0 0 2 0 1 0 0 1 0 0 2 1 0 0 13 0 1631.7137 Q14974 Q14974 750 762 KPNB1 Importin subunit beta-1 yes yes 2 2.8812E-05 182.92 By MS/MS 4 0 1 1 59132 59132 0 11987 1462 12738 30281 24139 24139 1 5564.7 0 SDYDREALLGVQEDVDEYVK AGKAEELHYPLGERRSDYDREALLGVQEDV EALLGVQEDVDEYVKLGHEEQQKRLQAIIK R S D V K L 1 1 0 4 0 1 3 1 0 0 2 1 0 0 0 1 0 0 2 3 0 0 20 1 2342.0914 Q14257 Q14257 37 56 RCN2 Reticulocalbin-2 yes yes 3 0.00082275 97.384 By MS/MS 6 0 1 1 607570 607570 0 11988 1436 12739 30282 24140 24140 1 4176.6 0 SDYSEAAK GTKQITQSALLAEARSDYSEAAKQYDEALN ALLAEARSDYSEAAKQYDEALNKQDWVDGE R S D A K Q 2 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 8 0 869.37668 P78527 P78527 2963 2970 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.05062 82.241 By MS/MS 1.5 0.5 1 1 2 717410 717410 0 11989 1225 12740 30283;30284 24141 24141 1 236170 0 SEADSDKNATILELR LRNLRLEYDDLRRGRSEADSDKNATILELR SEADSDKNATILELRSQLQISNNRTLELQG R S E L R S 2 1 1 2 0 0 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 15 1 1660.8268 P15924 P15924 1739 1753 DSP Desmoplakin yes yes 3 0.004653 114.69 By MS/MS By MS/MS 2.6 1.02 1 1 2 1 4 1 1622600 1239000 383620 11990 628 12741 30285;30286;30287;30288;30289 24142;24143;24144 24143 3 208770 48829 SEADVAQQFQYAVR PNVLLQNLCCRILGRSEADVAQQFQYAVRV RSEADVAQQFQYAVRVIGSNFAPTVERDEF R S E V R V 3 1 0 1 0 3 1 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 14 0 1610.7689 Q96CW5 Q96CW5 24 37 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 6.5264E-33 303.31 By MS/MS 4.5 0.5 1 1 2 4224900 4224900 0 11991 2128 12742 30290;30291 24145 24145 1 386990 0 SEAGLAGAPAR NEIVTQIDAQNKLEKSEAGLAGAPARAVSA KLEKSEAGLAGAPARAVSAVKNMNLPEIPR K S E A R A 4 1 0 0 0 0 1 2 0 0 1 0 0 0 1 1 0 0 0 0 0 0 11 0 998.51451 Q92572 Q92572 150 160 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 4.3731E-09 207.29 By MS/MS 9 0 1 1 1292000 1292000 0 11992 2056 12743 30292 24146 24146 1 25427 0 SEANATQLLR LKSLLLTVSQYKAVKSEANATQLLRHLEVI YKAVKSEANATQLLRHLEVISGQKLTRLFT K S E L R H 2 1 1 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1101.5778 Q8TCG1 Q8TCG1 22 31 KIAA1524 Protein CIP2A yes yes 2 0.00011634 154.01 By MS/MS 4 0 1 1 0 0 0 11993 1990 12744 30293 24147 24147 1 0 0 SEAPNWATQDSGFY MLAMNIEKKLNQNSRSEAPNWATQDSGFY_ RSEAPNWATQDSGFY_______________ R S E F Y - 2 0 1 1 0 1 1 1 0 0 0 0 0 1 1 2 1 1 1 0 0 0 14 0 1571.6529 P60228 P60228 432 445 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00050115 134.18 By MS/MS 8 1.41 1 1 1 1 1 5 16497000 16497000 0 11994 1090 12745 30294;30295;30296;30297;30298 24148;24149;24150;24151 24149 4 145370 0 SEAVVEYVFSGSR QKAKQFLPFLQRAGRSEAVVEYVFSGSRLK GRSEAVVEYVFSGSRLKLYLPKETCLITFL R S E S R L 1 1 0 0 0 0 2 1 0 0 0 0 0 1 0 3 0 0 1 3 0 0 13 0 1428.6885 Q7KZF4 Q7KZF4 527 539 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 4.1158E-33 300.35 By MS/MS 4.5 0.5 1 1 2 3147600 3147600 0 11995 1755 12746 30299;30300 24152 24152 1 272150 0 SECLNNIGDSSPLIR AHFQNFPNGVTDFIKSECLNNIGDSSPLIR SECLNNIGDSSPLIRATVGILITTIASKGE K S E I R A 0 1 2 1 1 0 1 1 0 2 2 0 0 0 1 3 0 0 0 0 0 0 15 0 1673.8043 Q92973 Q92973 101 115 TNPO1 Transportin-1 yes yes 2 3.2837E-11 274 By MS/MS 4 0 1 1 7486100 7486100 0 11996 2082 12747 30301 24153 24153 1 704490 0 SEDEEKVKLR ______________________________ ______________________________ M S E L R R 0 1 0 1 0 0 3 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1231.6408 P56962 P56962 2 11 STX17 Syntaxin-17 yes yes 3 0.054827 42.336 By MS/MS 7 0 1 1 1032600 1032600 0 11997 1077 12748 30302 24154 24154 1 16211 0 SEDFSLPAYMDR ISTSVCVRAHESVVKSEDFSLPAYMDRRDH VVKSEDFSLPAYMDRRDHPLPEVAHVKHLS K S E D R R 1 1 0 2 0 0 1 0 0 0 1 0 1 1 1 2 0 0 1 0 0 0 12 0 1429.6184 P13073 P13073 30 41 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.00029716 143.5 By MS/MS 10 0 2 2 380760 380760 0 11998 598 12749;12750 30303;30304 24155;24156 24155 280 2 20521 0 SEDFSLPAYMDRR ISTSVCVRAHESVVKSEDFSLPAYMDRRDH VKSEDFSLPAYMDRRDHPLPEVAHVKHLSA K S E R R D 1 2 0 2 0 0 1 0 0 0 1 0 1 1 1 2 0 0 1 0 0 0 13 1 1585.7195 P13073 P13073 30 42 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.004645 92.866 By MS/MS 10 0 1 1 648110 648110 0 11999 598 12751 30305 24157 24157 280 1 34931 0 SEDLLDYGPFR SRNVESYTKLGNPTRSEDLLDYGPFRDVPA NPTRSEDLLDYGPFRDVPAYSQDTFKVHYE R S E F R D 0 1 0 2 0 0 1 1 0 0 2 0 0 1 1 1 0 0 1 0 0 0 11 0 1310.6143 P04843 P04843 194 204 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 3.242E-06 179.51 By MS/MS 4.83 2.54 1 1 1 1 1 1 6 6345600 6345600 0 12000 478 12752 30306;30307;30308;30309;30310;30311 24158;24159;24160;24161;24162;24163;24164 24160 7 98588 0 SEDPDQQYLILNTAR ADEQSLVGRFIHLLRSEDPDQQYLILNTAR SEDPDQQYLILNTARKHFGAGGNQRIRFTL R S E A R K 1 1 1 2 0 2 1 0 0 1 2 0 0 0 1 1 1 0 1 0 0 0 15 0 1761.8533 Q96QK1 Q96QK1 500 514 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 1.7793E-24 290.1 By MS/MS 6 1.58 1 1 1 1 4 12179000 12179000 0 12001 2217 12753 30312;30313;30314;30315 24165;24166 24165 2 171280 0 SEDQNCVPPLQER KPMMPQESLNGTGCRSEDQNCVPPLQERKV CRSEDQNCVPPLQERKVTPIDSPPVWSPEG R S E E R K 0 1 1 1 1 2 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 13 0 1570.7046 Q5JSZ5 Q5JSZ5 721 733 PRRC2B Protein PRRC2B yes yes 2 0.00036946 145.14 By MS/MS 2 0.816 1 1 1 3 892170 892170 0 12002 1609 12754 30316;30317;30318 24167;24168 24168 2 221180 0 SEDTGLDSVATR QEEARAVEKDKSKARSEDTGLDSVATRTPM KARSEDTGLDSVATRTPMEHVTPKPETHLA R S E T R T 1 1 0 2 0 0 1 1 0 0 1 0 0 0 0 2 2 0 0 1 0 0 12 0 1249.5786 O94966 O94966 434 445 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.0003402 160.91 By MS/MS 3.5 0.5 1 1 2 638470 638470 0 12003 379 12755 30319;30320 24169;24170 24169 2 41215 0 SEDTTGPITGLALTSVNK IEPNVFLRPFLEVIRSEDTTGPITGLALTS TTGPITGLALTSVNKFLSYALIDPTHEGTA R S E N K F 1 0 1 1 0 0 1 2 0 1 2 1 0 0 1 2 4 0 0 1 0 0 18 0 1802.9262 Q92538 Q92538 74 91 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 1.4E-07 220.32 By MS/MS 2 0 1 1 731850 731850 0 12004 2050 12756 30321 24171 24171 1 247540 0 SEDYVDIVQGR SNFWGALSADGYYARSEDYVDIVQGRRVGV YYARSEDYVDIVQGRRVGVWNVPYISNIYL R S E G R R 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 2 0 0 11 0 1279.6044 Q02809 Q02809 431 441 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 3.6792E-06 179.1 By MS/MS 5 0 1 1 3833100 3833100 0 12005 1280 12757 30322 24172 24172 1 38444 0 SEDYVELVQR SNFWGALSPDEYYARSEDYVELVQRKRVGV EYYARSEDYVELVQRKRVGVWNVPYISQAY R S E Q R K 0 1 0 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 10 0 1236.5986 O60568 O60568 441 450 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 2 1.1094E-07 191.17 By MS/MS 5 0 1 1 1894700 1894700 0 12006 264 12758 30323 24173 24173 1 19003 0 SEEAHAEDSVMDHHFR ADGQWKKGFVLHKSKSEEAHAEDSVMDHHF EEAHAEDSVMDHHFRKPANDITSQLEINFG K S E F R K 2 1 0 2 0 0 3 0 3 0 0 0 1 1 0 2 0 0 0 1 0 0 16 0 1895.7857 Q8NC51 Q8NC51 330 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 4 0.009021 77.204 By MS/MS 6 0 1 1 5412200 5412200 0 12007 1946 12759 30324 24174 24174 1 37205 0 SEEEIDFLR QFQSFSQYRCKTAKKSEEEIDFLRSNPKIW CKTAKKSEEEIDFLRSNPKIWNVHSVLNVL K S E L R S 0 1 0 1 0 0 3 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1136.535 Q9Y262 Q9Y262 208 216 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 2.6106E-10 204.27 By MS/MS By MS/MS 5 2.24 1 1 2 2 1 1 6 2 29479000 29180000 298920 12008 2814 12760 30325;30326;30327;30328;30329;30330;30331;30332 24175;24176;24177;24178;24179;24180;24181;24182 24177 7 494910 275890 SEEEIDFLRSNPK QFQSFSQYRCKTAKKSEEEIDFLRSNPKIW KKSEEEIDFLRSNPKIWNVHSVLNVLHSLV K S E P K I 0 1 1 1 0 0 3 0 0 1 1 1 0 1 1 2 0 0 0 0 0 0 13 1 1562.7577 Q9Y262 Q9Y262 208 220 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0002155 163.84 By MS/MS 5 0 1 1 1790100 1790100 0 12009 2814 12761 30333 24183 24183 1 17954 0 SEEPEVPDQEGLQR VPGTPGLPGSTGNPKSEEPEVPDQEGLQRI KSEEPEVPDQEGLQRITGLSPGRSALIVAV K S E Q R I 0 1 0 1 0 2 4 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 14 0 1611.7376 Q9H2V7 Q9H2V7 36 49 SPNS1 Protein spinster homolog 1 yes yes 2 0.00017055 163.45 By MS/MS 3 1.41 1 1 1 1 1 5 2969300 2969300 0 12010 2434 12762 30334;30335;30336;30337;30338 24184;24185 24184 2 531560 0 SEEQLKEEGIEYK PSVIYTHPEVAWVGKSEEQLKEEGIEYKVG GKSEEQLKEEGIEYKVGKFPFAANSRAKTN K S E Y K V 0 0 0 0 0 1 5 1 0 1 1 2 0 0 0 1 0 0 1 0 0 0 13 1 1580.757 P09622 P09622 405 417 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 3 0.019794 145.83 By MS/MS By MS/MS 6 0 2 1 1 3490200 3407000 83219 12011 539 12763 30339;30340 24186;24187 24187 2 23420 85275 SEETKGQDIFQR VARFLKYTHTKQAFKSEETKGQDIFQRSIL AFKSEETKGQDIFQRSILGHILPEAMVCYL K S E Q R S 0 1 0 1 0 2 2 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 12 1 1436.6896 O75165 O75165 1154 1165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.028052 70.685 By MS/MS 2 0 1 1 315830 315830 0 12012 302 12764 30341 24188 24188 1 106830 0 SEETNQQEVANSLAK LFNYDYTLEESGIQKSEETNQQEVANSLAK SEETNQQEVANSLAKLSVHALSRLGGYLAE K S E A K L 2 0 2 0 0 2 3 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 15 0 1646.7748 O75165 O75165 1566 1580 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 8.7957E-44 329.77 By MS/MS 3 0.816 1 1 1 3 1985000 1985000 0 12013 302 12765 30342;30343;30344 24189 24189 1 555510 0 SEFEQNLSEK DHLRDVLRVQEQELKSEFEQNLSEKLSEQE EQELKSEFEQNLSEKLSEQELQFRRLSQEQ K S E E K L 0 0 1 0 0 1 3 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1209.5513 Q16891 Q16891 507 516 IMMT MICOS complex subunit MIC60 yes yes 2 0.0028268 128.35 By matching By MS/MS 4 0 2 1 1 718300 679710 38588 12014 1563 12766 30345;30346 24190;24191 24191 2 63966 82217 SEFQLLVDQAR KEIDEIHSKYRKKHKSEFQLLVDQARKGYK KKHKSEFQLLVDQARKGYKKIAGMSQKTVT K S E A R K 1 1 0 1 0 2 1 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1304.6725 Q9NS91 Q9NS91 348 358 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 0.012089 98.898 By MS/MS 5 0 1 1 301940 301940 0 12015 2568 12767 30347 24192 24192 0 3028.3 0 SEGALELADVSNELPGLK NPIEDEAVIASLLEKSEGALELADVSNELP ALELADVSNELPGLKWMPGITQWKVMTKDG K S E L K W 2 0 1 1 0 0 3 2 0 0 4 1 0 0 1 2 0 0 0 1 0 0 18 0 1840.9418 Q08J23 Q08J23 339 356 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 3.7471E-07 265.12 By MS/MS 4.5 0.5 1 1 2 512320 512320 0 12016 1317 12768 30348;30349 24193 24193 1 38697 0 SEGDSVGESVHGKPSVVYR ______________________________ SVGESVHGKPSVVYRFFTRLGQIYQSWLDK M S E Y R F 0 1 0 1 0 0 2 3 1 0 0 1 0 0 1 4 0 0 1 4 0 0 19 1 1987.9599 O15258 O15258 2 20 RER1 Protein RER1 yes yes 3 1.9183E-05 134.37 By MS/MS 3.75 3.11 1 1 1 1 4 1549300 1549300 0 12017 175 12769 30350;30351;30352;30353 24194;24195;24196 24194 3 312620 0 SEGGEDYTGATVIEPLK LRQAMHEGLLMPVVKSEGGEDYTGATVIEP GGEDYTGATVIEPLKGYYDVPIATLDFSSL K S E L K G 1 0 0 1 0 0 3 3 0 1 1 1 0 0 1 1 2 0 1 1 0 0 17 0 1764.8418 P28340 P28340 575 591 POLD1 DNA polymerase delta catalytic subunit yes yes 2 5.7111E-07 246.51 By MS/MS 3.5 0.5 1 1 2 588400 588400 0 12018 754 12770 30354;30355 24197;24198 24198 2 28468 0 SEGLLYVHSSR DIVDAKLKIPVSGSKSEGLLYVHSSRGGPF SGSKSEGLLYVHSSRGGPFQRWHLDEVFLE K S E S R G 0 1 0 0 0 0 1 1 1 0 2 0 0 0 0 3 0 0 1 1 0 0 11 0 1246.6306 Q9GZY4 Q9GZY4 98 108 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 2 1.7008E-05 166.66 By MS/MS 10 0 1 1 573900 573900 0 12019 2399 12771 30356 24199 24199 1 30931 0 SEGPQVFYK KVYNTLRHAVGTMYRSEGPQVFYKGLAPTL VGTMYRSEGPQVFYKGLAPTLIAIFPYAGL R S E Y K G 0 0 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 9 0 1053.5131 Q9HC21 Q9HC21 168 176 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0044905 110.12 By MS/MS 8 0 1 1 1023600 1023600 0 12020 2509 12772 30357 24200 24200 1 12923 0 SEGVVAVLLTK GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA GYCRSEGVVAVLLTKKSLARRVYATILNAG R S E T K K 1 0 0 0 0 0 1 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 11 0 1114.6598 P49327 P49327 225 235 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.4633E-07 197.79 By MS/MS 3.9 2.12 1 2 2 2 1 1 1 10 18280000 18280000 0 12021 946 12773 30358;30359;30360;30361;30362;30363;30364;30365;30366;30367 24201;24202;24203;24204;24205;24206;24207;24208;24209;24210;24211;24212 24208 12 3212700 0 SEGVVAVLLTKK GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA YCRSEGVVAVLLTKKSLARRVYATILNAGT R S E K K S 1 0 0 0 0 0 1 1 0 0 2 2 0 0 0 1 1 0 0 3 0 0 12 1 1242.7547 P49327 P49327 225 236 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.1891E-05 192.5 By MS/MS 4.09 2.11 1 2 2 2 1 1 1 1 11 13093000 13093000 0 12022 946 12774 30368;30369;30370;30371;30372;30373;30374;30375;30376;30377;30378 24213;24214;24215;24216;24217;24218;24219;24220;24221;24222 24216 9 2152700 0 SEGYFGMYR RVYTSMSDCLIKTVRSEGYFGMYRGAAVNL LIKTVRSEGYFGMYRGAAVNLTLVTPEKAI R S E Y R G 0 1 0 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 2 0 0 0 9 0 1108.4648 Q9H936 Q9H936 59 67 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 7.6038E-05 166.68 By MS/MS 8 0 1 1 1682800 1682800 0 12023 2480 12775 30379 24223 24223 1 21245 0 SEHLSVRPQTALEENETQK GEARTQHGGSHVSRKSEHLSVRPQTALEEN SVRPQTALEENETQKEVPQDQHLEAPADQS K S E Q K E 1 1 1 0 0 2 4 0 1 0 2 1 0 0 1 2 2 0 0 1 0 0 19 1 2195.0818 Q9Y3D9 Q9Y3D9 151 169 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 4 0.0051645 79.471 By MS/MS 9 0 1 1 467260 467260 0 12024 2875 12776 30380 24224 24224 1 9195.8 0 SEIADLNVR AARSAEYGSSLQSSRSEIADLNVRIQKLRS SLQSSRSEIADLNVRIQKLRSQILSVKSHC R S E V R I 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 297 305 KRT80 Keratin, type II cytoskeletal 80 yes no 2 0.00070892 143.28 By MS/MS 3 0 1 1 612330 0 612330 + 12025 69 12777 30381 24225 24225 1 0 77940 SEIDNVKK KIEISELNRVIQRLRSEIDNVKKQISNLQQ RVIQRLRSEIDNVKKQISNLQQSISDAEQR R S E K K Q 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 931.49746 CON__P04264;P04264;CON__Q922U2 P04264 410 417 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.0012483 174.52 By MS/MS By MS/MS 3 1.41 2 2 2 2 2 5 5 11093000 6276800 4815800 + 12026 471;45;74 12778 30382;30383;30384;30385;30386;30387;30388;30389;30390;30391 24226;24227;24228;24229;24230;24231;24232;24233 24228 8 633520 2699000 SEIEYYAMLAK AKLVILANNCPALRKSEIEYYAMLAKTGVH ALRKSEIEYYAMLAKTGVHHYSGNNIELGT K S E A K T 2 0 0 0 0 0 2 0 0 1 1 1 1 0 0 1 0 0 2 0 0 0 11 0 1316.6322 P62888 P62888 58 68 RPL30 60S ribosomal protein L30 yes yes 2 1.9123E-05 164.68 By MS/MS 10 0 1 1 151860 151860 0 12027 1182 12779 30392 24234 24234 1 8184.7 0 SEIGEKQDTELQEK EKSLESHRAKVVTQRSEIGEKQDTELQEKE RSEIGEKQDTELQEKETPTQVYQKDKQDAD R S E E K E 0 0 0 1 0 2 4 1 0 1 1 2 0 0 0 1 1 0 0 0 0 0 14 1 1632.7843 Q5SW79 Q5SW79 667 680 CEP170 Centrosomal protein of 170 kDa yes yes 3 0.027137 70.373 By MS/MS 2 0 1 1 503620 503620 0 12028 1623 12780 30393 24235 24235 1 170350 0 SEIGEKQDTELQEKETPTQVYQK EKSLESHRAKVVTQRSEIGEKQDTELQEKE TELQEKETPTQVYQKDKQDADRPLSKMNRA R S E Q K D 0 0 0 1 0 4 5 1 0 1 1 3 0 0 1 1 3 0 1 1 0 0 23 2 2707.3188 Q5SW79 Q5SW79 667 689 CEP170 Centrosomal protein of 170 kDa yes yes 4 0.016043 63.056 By MS/MS 2 0 1 1 430790 430790 0 12029 1623 12781 30394 24236 24236 0 145710 0 SEIQDVNYSLEAVK PTLELLQNPKEVLTRSEIQDVNYSLEAVKV RSEIQDVNYSLEAVKVKTVCQIPLMKEMLK R S E V K V 1 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 1 2 0 0 14 0 1593.7886 Q9C037 Q9C037 275 288 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 2 2.153E-07 215.02 By MS/MS 6 0 1 1 3042100 3042100 0 12030 2386 12782 30395 24237 24237 1 20912 0 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 988.53016 CON__Q04695;Q04695;CON__P02533;P02533 CON__P02533 329 336 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2;3 0.0095517 135.84 By MS/MS By MS/MS 4.53 3.11 3 2 4 2 1 2 3 10 7 29331000 15287000 14044000 + 12031 39;57 12783 30396;30397;30398;30399;30400;30401;30402;30403;30404;30405;30406;30407;30408;30409;30410;30411;30412 24238;24239;24240;24241;24242 24241 5 1454800 4997700 SEITELR TTEIDNNIEQISSYKSEITELRRNVQALEI IEQISSYKSEITELRRNVQALEIELQSQLA K S E L R R 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 7 0 846.4447 CON__P13645;P13645;CON__P02535-1 CON__P13645 363 369 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.022461 145.04 By MS/MS By MS/MS 4.38 2.29 1 1 1 2 1 1 1 1 7 19893000 6438900 13454000 + 12032 50 12784 30413;30414;30415;30416;30417;30418;30419;30420 24243;24244;24245;24246;24247 24246 5 605940 6559500 SEITELRR TTEIDNNIEQISSYKSEITELRRNVQALEI EQISSYKSEITELRRNVQALEIELQSQLAL K S E R R N 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 1 1002.5458 CON__P13645;P13645;CON__P02535-1 CON__P13645 363 370 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.018852 129.68 By MS/MS By MS/MS 5.36 3.31 1 2 2 1 1 1 1 2 4 7 35791000 5296200 30495000 + 12033 50 12785 30421;30422;30423;30424;30425;30426;30427;30428;30429;30430;30431 24248;24249;24250;24251 24249 4 645410 11866000 SEIVPLFTSLASDEQDSVR KLGEFAKVLELDSVKSEIVPLFTSLASDEQ PLFTSLASDEQDSVRLLAVEACVSIAQLLS K S E V R L 1 1 0 2 0 1 2 0 0 1 2 0 0 1 1 4 1 0 0 2 0 0 19 0 2092.0324 P30154 P30154 215 233 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 2 3.5822E-06 201.72 By MS/MS 6 0 1 1 217550 217550 0 12034 770 12786 30432 24252 24252 1 1495.5 0 SEKENNFPPLPK ______________________________ ______________________________ M S E P K F 0 0 2 0 0 0 2 0 0 0 1 2 0 1 3 1 0 0 0 0 0 0 12 1 1398.7143 Q969E2 Q969E2 2 13 SCAMP4 Secretory carrier-associated membrane protein 4 yes yes 2 0.00028096 144.65 By MS/MS 1.5 0.5 1 1 2 432710 432710 0 12035 2090 12787 30433;30434 24253;24254 24254 2 125700 0 SELEDFELDK DLDDILESITNRMIKSELEDFELDKSADFS NRMIKSELEDFELDKSADFSQSTSIGIKNN K S E D K S 0 0 0 2 0 0 3 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1223.5558 Q9NVI1 Q9NVI1 716 725 FANCI Fanconi anemia group I protein yes yes 2 2.2788E-06 179.51 By MS/MS 3 0 1 1 328960 328960 0 12036 2597 12788 30435 24255 24255 1 6019 0 SELEEQQMHLNVGLR LDFINHYANLFHEKRSELEEQQMHLNVGLR SELEEQQMHLNVGLRKIKETVDQVEELRRD R S E L R K 0 1 1 0 0 2 3 1 1 0 3 0 1 0 0 1 0 0 0 1 0 0 15 0 1781.873 Q14204 Q14204 3192 3206 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.016275 82.202 By MS/MS 1.5 0.5 1 1 2 380170 380170 0 12037 1433 12789 30436;30437 24256 24256 837 1 101640 0 SELEQLRQEAEQLR ______________________________ MSELEQLRQEAEQLRNQIRDARKACGDSTL M S E L R N 1 2 0 0 0 3 4 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 14 1 1727.8802 P62879 P62879 2 15 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 2 0.0089434 92.112 By MS/MS 8 0 1 1 181990 181990 0 12038 1181 12790 30438 24257 24257 1 2297.6 0 SELGKLSLDK DPEYAVTQLAQTTMRSELGKLSLDKVFRER QTTMRSELGKLSLDKVFRERESLNASIVDA R S E D K V 0 0 0 1 0 0 1 1 0 0 3 2 0 0 0 2 0 0 0 0 0 0 10 1 1088.6077 Q9UJZ1 Q9UJZ1 136 145 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.037435 99.788 By MS/MS 7 0 1 1 1521300 1521300 0 12039 2755 12791 30439 24258 24258 1 23881 0 SELGNQSPSTSSR TARIRTRMQNDSILKSELGNQSPSTSSRQV LKSELGNQSPSTSSRQVTGQPQNASFVKRN K S E S R Q 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 0 13 0 1348.6219 Q5JTV8 Q5JTV8 309 321 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 1.6558E-11 234.24 By MS/MS 6.5 0.5 1 1 2 2152800 2152800 0 12040 1611 12792 30440;30441 24259 24259 1 17783 0 SELIQLVAVTQK FLHNNYNYILKSLEKSELIQLVAVTQKTAE LEKSELIQLVAVTQKTAERSYREHIEQQIQ K S E Q K T 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 12 0 1327.7711 Q9UPT5 Q9UPT5 591 602 EXOC7 Exocyst complex component 7 yes yes 2 0.00029787 144.1 By MS/MS 5 0 1 1 771230 771230 0 12041 2801 12793 30442 24260 24260 1 7735 0 SELKHAKR TVPLSRTHGKSFAHRSELKHAKRIVVKLGS GKSFAHRSELKHAKRIVVKLGSAVVTRGDE R S E K R I 1 1 0 0 0 0 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 8 2 967.55631 P54886 P54886 65 72 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.026529 101.6 By MS/MS 5 0 1 1 0 0 0 12042 1048 12794 30443 24261 24261 1 0 0 SELLNELMDSAK WKMLGLFRKHNKIPRSELLNELMDSAKVSN IPRSELLNELMDSAKVSNSPSQAIEVVELA R S E A K V 1 0 1 1 0 0 2 0 0 0 3 1 1 0 0 2 0 0 0 0 0 0 12 0 1348.6544 Q96EY7 Q96EY7 608 619 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 1.2894E-08 240 By MS/MS 6 1.41 2 1 3 5495200 5495200 0 12043 2151 12795;12796 30444;30445;30446 24262;24263;24264 24263 1020 3 55468 0 SELLSQLQQHEEESR SAVADSLPFDKQTTKSELLSQLQQHEEESR SELLSQLQQHEEESRAQRDAKRPKISFSNI K S E S R A 0 1 0 0 0 3 4 0 1 0 3 0 0 0 0 3 0 0 0 0 0 0 15 0 1811.865 Q92665 Q92665 175 189 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2;3 1.4906E-16 255.24 By MS/MS By matching 7.25 0.433 3 1 3 1 12906000 12870000 36376 12044 2067 12797 30447;30448;30449;30450 24265;24266 24266 2 200500 65512 SELLSQLQQHEEESRAQR SAVADSLPFDKQTTKSELLSQLQQHEEESR LSQLQQHEEESRAQRDAKRPKISFSNIISD K S E Q R D 1 2 0 0 0 4 4 0 1 0 3 0 0 0 0 3 0 0 0 0 0 0 18 1 2167.0618 Q92665 Q92665 175 192 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 3 0.016951 72.428 By MS/MS 7 0 1 1 1697400 1697400 0 12045 2067 12798 30451 24267 24267 1 26647 0 SELPDSIESALQGDER TLCRGSPVVTHDLLRSELPDSIESALQGDE ELPDSIESALQGDERCVLDTMRLVDLLLVL R S E E R C 1 1 0 2 0 1 3 1 0 1 2 0 0 0 1 3 0 0 0 0 0 0 16 0 1744.8115 Q9ULT8 Q9ULT8 300 315 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00012487 181.98 By MS/MS 1.5 0.5 1 1 2 196150 196150 0 12046 2774 12799 30452;30453 24268;24269 24269 2 57529 0 SELPLDPLPVPTEEGNPLLK RTESRSTEPELIQVKSELPLDPLPVPTEEG DPLPVPTEEGNPLLKHYRGPAGDATVASEK K S E L K H 0 0 1 1 0 0 3 1 0 0 5 1 0 0 5 1 1 0 0 1 0 0 20 0 2157.1569 Q15758 Q15758 503 522 SLC1A5 Neutral amino acid transporter B(0) yes yes 2;3 2.3004E-06 196.37 By MS/MS By matching 6.5 1.86 1 3 2 1 1 1 1 9 1 7994800 7970500 24316 12047 1530 12800 30454;30455;30456;30457;30458;30459;30460;30461;30462;30463 24270;24271;24272;24273;24274;24275 24271 6 79464 20420 SELTDSASVLDNFK NGTEAEVKETAMIAKSELTDSASVLDNFKF KSELTDSASVLDNFKFLESAAADFSDEDED K S E F K F 1 0 1 2 0 0 1 0 0 0 2 1 0 1 0 3 1 0 0 1 0 0 14 0 1524.7308 O43815 O43815 222 235 STRN Striatin yes yes 2 1.8381E-12 280.38 By MS/MS 4 0 1 1 2406200 2406200 0 12048 237 12801 30464 24276;24277 24277 2 226440 0 SELVANNVTLPAGEQRK EFLEDPSVLTKDKLKSELVANNVTLPAGEQ LVANNVTLPAGEQRKDVYVQLYLQHLTARN K S E R K D 2 1 2 0 0 1 2 1 0 0 2 1 0 0 1 1 1 0 0 2 0 0 17 1 1824.9694 P42166;P42167 P42166 18 34 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 0.040325 64.04 By MS/MS 5.5 0.5 1 1 2 5172400 5172400 0 12049 875;876 12802 30465;30466 24278 24278 1 39309 0 SEMTPEELQK ______________________________ LNKPKSEMTPEELQKREEEEFNTGPLSVLT K S E Q K R 0 0 0 0 0 1 3 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 10 0 1190.5489 P62316 P62316 9 18 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.00086424 126.24 By MS/MS By matching 10 0 3 2 1 795490 754750 40740 12050 1156 12803;12804 30467;30468;30469 24279;24280 24280 659 2 40678 52159 SENEEFVEVGR FFIILEGSAAVLQRRSENEEFVEVGRLGPS LQRRSENEEFVEVGRLGPSDYFGEIALLMN R S E G R L 0 1 1 0 0 0 4 1 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1293.5837 P10644 P10644 307 317 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 9.14E-05 152.64 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 8285300 8174000 111290 12051 567 12805 30470;30471;30472 24281;24282;24283 24282 3 62504 114040 SEQDQAENEGEDSAVLMER KAHQRQLTPPEGSSKSEQDQAENEGEDSAV QAENEGEDSAVLMERLCKYIYAKDRTDRIR K S E E R L 2 1 1 2 0 2 5 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 19 0 2135.8913 Q99613;B5ME19 Q99613 532 550 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 3.8967E-72 374.19 By MS/MS By matching 4.88 1.05 4 2 1 1 7 1 26430000 26340000 89757 12052 2252 12806;12807 30473;30474;30475;30476;30477;30478;30479;30480 24284;24285;24286;24287 24287 1045 4 2114500 191240 SEQEFQEQLESAR KAVRGGGGKGMRIVRSEQEFQEQLESARRE VRSEQEFQEQLESARREAKKSFNDDAMLIE R S E A R R 1 1 0 0 0 3 4 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 13 0 1579.7114 Q96RQ3 Q96RQ3 220 232 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 1.5905E-11 234.79 By MS/MS 5 0 1 1 974730 974730 0 12053 2224 12808 30481 24288 24288 1 9776 0 SEQHGSSSGSSSSYGQHGSGSR SSYEQHGSRSGQSSRSEQHGSSSGSSSSYG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS R S E S R Q 0 1 0 0 0 2 1 5 2 0 0 0 0 0 0 10 0 0 1 0 0 0 22 0 2151.8802 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 970 991 HRNR Hornerin yes no 2;3;4 7.7158E-12 214.42 By MS/MS By MS/MS 5.45 2.73 1 2 2 5 1 2 1 2 2 2 5 15 6923300 1675800 5247500 + 12054 73 12809 30482;30483;30484;30485;30486;30487;30488;30489;30490;30491;30492;30493;30494;30495;30496;30497;30498;30499;30500;30501 24289;24290;24291;24292;24293;24294;24295;24296;24297;24298;24299;24300;24301;24302;24303 24290 14 132690 2319600 SEQSSMLELLR TETFQKILDMKGLKRSEQSSMLELLRQRLP GLKRSEQSSMLELLRQRLPAPPSGAESSGS R S E L R Q 0 1 0 0 0 1 2 0 0 0 3 0 1 0 0 3 0 0 0 0 0 0 11 0 1291.6442 Q5VIR6 Q5VIR6 781 791 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.00058417 129.88 By MS/MS 4 0 1 1 389780 389780 0 12055 1644 12810 30502 24304 24304 1 36681 0 SEREEVSSWR RDLRDDRDRRGPPLRSEREEVSSWRRADDR GPPLRSEREEVSSWRRADDRKDDRVEERDP R S E W R R 0 2 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 1 0 1 0 0 10 1 1263.5844 Q14152 Q14152 1302 1311 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0044058 125.71 By MS/MS 3 0 1 1 563400 563400 0 12056 1422 12811 30503 24305 24305 1 10309 0 SEREEVSSWRR RDLRDDRDRRGPPLRSEREEVSSWRRADDR PPLRSEREEVSSWRRADDRKDDRVEERDPP R S E R R A 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 1 0 1 0 0 11 2 1419.6855 Q14152 Q14152 1302 1312 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.036423 73.781 By MS/MS 3 0 1 1 827500 827500 0 12057 1422 12812 30504 24306 24306 1 15141 0 SESPKEPEQLRK ______________________________ MSKSESPKEPEQLRKLFIGGLSFETTDESL K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 P09651 P09651 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 3 0.006587 95.618 By MS/MS 7.5 0.5 1 1 2 1861200 1861200 0 12058 540 12813 30505;30506 24307;24308 24308 2 26749 0 SESPSLTQER IIGAVTMAGIMAADRSESPSLTQERANLSD MAADRSESPSLTQERANLSDEQCTQVTSLL R S E E R A 0 1 0 0 0 1 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1132.536 Q9BXW9 Q9BXW9 590 599 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.004827 105.98 By MS/MS 2.5 0.5 1 1 2 602280 602280 0 12059 2362 12814 30507;30508 24309 24309 1 24168 0 SESSDFEVVPK IPSGPLRQREESETRSESSDFEVVPKRRRQ SETRSESSDFEVVPKRRRQRGSETDTDSEI R S E P K R 0 0 0 1 0 0 2 0 0 0 0 1 0 1 1 3 0 0 0 2 0 0 11 0 1222.5717 Q9Y520 Q9Y520 1246 1256 PRRC2C Protein PRRC2C yes yes 2 0.00025762 138.08 By MS/MS 1.5 0.5 1 1 2 884000 884000 0 12060 2905 12815 30509;30510 24310;24311 24310 2 250020 0 SESVPPVTDWAWYK SEHINEGETAMLVCKSESVPPVTDWAWYKI KSESVPPVTDWAWYKITDSEDKALMNGSES K S E Y K I 1 0 0 1 0 0 1 0 0 0 0 1 0 0 2 2 1 2 1 2 0 0 14 0 1663.7882 P35613 P35613 244 257 BSG Basigin yes yes 2 0.0066923 99.215 By MS/MS 6.5 0.5 1 1 2 1120400 1120400 0 12061 828 12816 30511;30512 24312 24312 1 8271.2 0 SETAPAAPAAAPPAEKAPVK ______________________________ AAPAAAPPAEKAPVKKKAAKKAGGTPRKAS M S E V K K 8 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 1 0 0 1 0 0 20 1 1872.9945 P16403 P16403 2 21 HIST1H1C Histone H1.2 yes yes 2 2.4462E-05 160.78 By MS/MS 7 0.816 1 1 1 3 6572400 6572400 0 12062 633 12817 30513;30514;30515 24313;24314 24313 2 84285 0 SETAPAAPAAPAPAEKTPVK ______________________________ AAPAAPAPAEKTPVKKKARKSAGAAKRKAS M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 2 6.1386E-06 136.83 By MS/MS 7 0.816 1 1 1 3 4292400 4292400 0 12063 560 12818 30516;30517;30518 24315 24315 1 56841 0 SETDKETSLVK KTLLHLGSSAPGKEKSETDKETSLVKQTLA GKEKSETDKETSLVKQTLAKLQQQEQREEA K S E V K Q 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 2 2 0 0 1 0 0 11 1 1235.6245 Q5SW79 Q5SW79 732 742 CEP170 Centrosomal protein of 170 kDa yes yes 2;3 3.9985E-06 163.66 By MS/MS 2.33 0.471 2 1 3 1459900 1459900 0 12064 1623 12819 30519;30520;30521 24316;24317 24316 2 402160 0 SETDTSLIR PIDLFMIEIMEMKHKSETDTSLIRGLVLDH MEMKHKSETDTSLIRGLVLDHGARHPDMKK K S E I R G 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 2 2 0 0 0 0 0 9 0 1020.5088 P40227 P40227 200 208 CCT6A T-complex protein 1 subunit zeta yes yes 2 7.8535E-07 184.49 By MS/MS 6.5 0.5 1 1 2 19876000 19876000 0 12065 858 12820 30522;30523 24318 24318 1 158730 0 SETELKDTYAR NGDVTSTILQTIMEKSETELKDTYARWLPL IMEKSETELKDTYARWLPLGLGLNHLGKGE K S E A R W 1 1 0 1 0 0 2 0 0 0 1 1 0 0 0 1 2 0 1 0 0 0 11 1 1311.6307 Q13200 Q13200 546 556 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2;3 2.0785E-12 206.73 By MS/MS 4.33 0.471 2 1 3 6864600 6864600 0 12066 1365 12821 30524;30525;30526 24319;24320;24321 24320 3 590000 0 SEVATLTAAGK GLCGAIHSSIAKQMKSEVATLTAAGKEVML KQMKSEVATLTAAGKEVMLVGIGDKIRGIL K S E G K E 3 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1046.5608 P36542 P36542 116 126 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 4.8708E-13 230.06 By MS/MS By matching 8.33 0.471 2 1 2 1 21545000 21087000 458410 12067 835 12822 30527;30528;30529 24322;24323 24322 2 271800 618600 SEVSSDEDIQFR SDMDSILASLKLPPKSEVSSDEDIQFRLVT PPKSEVSSDEDIQFRLVTRFVNEAVMCLQE K S E F R L 0 1 0 2 0 1 2 0 0 1 0 0 0 1 0 3 0 0 0 1 0 0 12 0 1410.6263 P40939 P40939 665 676 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 9.5025E-09 215.72 By MS/MS By MS/MS 5 0 2 1 1 7258700 7169900 88852 12068 865 12823 30530;30531 24324;24325 24325 2 71910 74616 SEVTELRR NKEVASNSELVQSSRSEVTELRRVLQGLEI ELVQSSRSEVTELRRVLQGLEIELQSQLSM R S E R R V 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 1 988.53016 CON__P08779;P08779 CON__P08779 331 338 KRT16 Keratin, type I cytoskeletal 16 yes no 2;3 0.020166 126.28 By MS/MS By MS/MS 4.83 3.76 1 2 1 2 3 3 2353400 664310 1689100 + 12069 47 12824 30532;30533;30534;30535;30536;30537 24326;24327 24326 2 91050 2145800 SEYDRGVNTFSPEGR ______________________________ SEYDRGVNTFSPEGRLFQVEYAIEAIKLGS R S E G R L 0 2 1 1 0 0 2 2 0 0 0 0 0 1 1 2 1 0 1 1 0 0 15 1 1712.7754 P28066 P28066 6 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0017468 136.7 By MS/MS 8 0 1 1 880320 880320 0 12070 748 12825 30538 24328 24328 1 11114 0 SEYNDQLTR VLNFNPFMAFNPDPKSEYNDQLTRATNMTV FNPDPKSEYNDQLTRATNMTVSAIRFLKTL K S E T R A 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 9 0 1124.5098 P23786 P23786 143 151 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 2 0.0010014 133.99 By MS/MS 5 0 1 1 556090 556090 0 12071 710 12826 30539 24329 24329 1 5577.3 0 SFAAVIQALDGEMR SSLKTCYKYLNQTSRSFAAVIQALDGEMRN RSFAAVIQALDGEMRNAVCIFYLVLRALDT R S F M R N 3 1 0 1 0 1 1 1 0 1 1 0 1 1 0 1 0 0 0 1 0 0 14 0 1506.7501 P37268 P37268 53 66 FDFT1 Squalene synthase yes yes 2 1.5614E-16 253.42 By MS/MS 6.67 0.471 1 2 3 532970 532970 0 12072 845 12827 30540;30541;30542 24330;24331 24331 427 2 7373.7 0 SFAFVGPSR KGIVNAVKDPDANGKSFAFVGPSRYLLFHL PDANGKSFAFVGPSRYLLFHLVKYIFAVAH K S F S R Y 1 1 0 0 0 0 0 1 0 0 0 0 0 2 1 2 0 0 0 1 0 0 9 0 966.49232 Q16795 Q16795 262 270 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.010114 100.25 By MS/MS 7 0 1 1 1772700 1772700 0 12073 1559 12828 30543 24332 24332 1 27829 0 SFAGAVSPQEEEEFRR IRVLGIQVDTDGSGRSFAGAVSPQEEEEFR FAGAVSPQEEEEFRRLAALPNVYEVISKSI R S F R R L 2 2 0 0 0 1 4 1 0 0 0 0 0 2 1 2 0 0 0 1 0 0 16 1 1837.8595 P33992 P33992 309 324 MCM5 DNA replication licensing factor MCM5 yes yes 2;3 0.00036991 171.62 By MS/MS 4 0 2 2 3705700 3705700 0 12074 807 12829 30544;30545 24333;24334 24334 2 348730 0 SFCENFLK LMPTADDDMARSCAKSFCENFLKAGGLSLV MARSCAKSFCENFLKAGGLSLVVNVMQRDS K S F L K A 0 0 1 0 1 0 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 8 0 1043.4746 Q9UPU5 Q9UPU5 1200 1207 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.036301 87.696 By MS/MS 2.5 0.5 1 1 2 399360 399360 0 12075 2802 12830 30546;30547 24335 24335 1 110550 0 SFDFEIETK EISFVNFARGTTTTRSFDFEIETKQGTQYT GTTTTRSFDFEIETKQGTQYTFSSIEREEY R S F T K Q 0 0 0 1 0 0 2 0 0 1 0 1 0 2 0 1 1 0 0 0 0 0 9 0 1114.5183 Q08945 Q08945 388 396 SSRP1 FACT complex subunit SSRP1 yes yes 2 4.7935E-05 171.99 By MS/MS 5 0.816 1 1 1 3 3231100 3231100 0 12076 1313 12831 30548;30549;30550 24336 24336 1 62075 0 SFDKNLYR VIGEPFLNVNCEHIKSFDKNLYRQLISYPQ VNCEHIKSFDKNLYRQLISYPQEVIPTFDM K S F Y R Q 0 1 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 8 1 1041.5243 P33991 P33991 217 224 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.017226 94.302 By MS/MS 4.5 0.5 1 1 2 503070 503070 0 12077 806 12832 30551;30552 24337 24337 1 40186 0 SFDLLVK HQVPTENVQVHFTERSFDLLVKNLNGKSYS VQVHFTERSFDLLVKNLNGKSYSMIVNNLL R S F V K N 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 7 0 820.46945 Q9HB71 Q9HB71 112 118 CACYBP Calcyclin-binding protein yes yes 2 0.021611 111.04 By MS/MS 8.5 0.5 1 1 2 4078100 4078100 0 12078 2501 12833 30553;30554 24338;24339 24338 2 53079 0 SFDSNAFTLLLR SESVQKGFQMLADPRSFDSNAFTLLLRAAF DPRSFDSNAFTLLLRAAFQSLLDAQADEAV R S F L R A 1 1 1 1 0 0 0 0 0 0 3 0 0 2 0 2 1 0 0 0 0 0 12 0 1382.7194 Q9UBI1 Q9UBI1 19 30 COMMD3 COMM domain-containing protein 3 yes yes 2 2.0087E-12 229.82 By MS/MS 9 0 1 1 86079 86079 0 12079 2698 12834 30555 24340;24341 24340 2 1694.1 0 SFDVNKPGCEVDDLK PPRDFTSEPRLIVIRSFDVNKPGCEVDDLK SFDVNKPGCEVDDLKGGVAGGSILKGVLKV R S F L K G 0 0 1 3 1 0 1 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 15 1 1721.7931 P41091;Q2VIR3 P41091 261 275 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 5.0303E-05 193.81 By MS/MS 6.5 0.5 1 1 2 2844900 2844900 0 12080 866 12835 30556;30557 24342 24342 1 24491 0 SFDVNKPGCEVDDLKGGVAGGSILK PPRDFTSEPRLIVIRSFDVNKPGCEVDDLK VDDLKGGVAGGSILKGVLKVGQEIEVRPGI R S F L K G 1 0 1 3 1 0 1 5 0 1 2 3 0 1 1 2 0 0 0 3 0 0 25 2 2561.2796 P41091;Q2VIR3 P41091 261 285 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 3 1.5028E-08 170.37 By MS/MS 6 0 1 1 12051000 12051000 0 12081 866 12836 30558 24343;24344 24343 2 82839 0 SFEEAFQK GSCMKSVGEVMGIGRSFEEAFQKALRMVDE EVMGIGRSFEEAFQKALRMVDENCVGFDHT R S F Q K A 1 0 0 0 0 1 2 0 0 0 0 1 0 2 0 1 0 0 0 0 0 0 8 0 984.45526 P27708 P27708 771 778 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0076078 113.41 By MS/MS 2.5 1.12 1 1 1 1 4 3389200 3389200 0 12082 745 12837 30559;30560;30561;30562 24345;24346;24347 24347 3 857280 0 SFEWLSQMR DVTRSLIKSKIDNAKSFEWLSQMRFYFDPK KIDNAKSFEWLSQMRFYFDPKQTDVLQQLS K S F M R F 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 2 0 1 0 0 0 0 9 0 1182.5492 Q14204 Q14204 1835 1843 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0019597 120.99 By MS/MS 1.5 0.5 1 1 2 332520 332520 0 12083 1433 12838 30563;30564 24348;24349 24349 838 2 98781 0 SFFGFESTVEK EDWTCFEQSASLDIKSFFGFESTVEKIAMK LDIKSFFGFESTVEKIAMKQYTSNIKKGKE K S F E K I 0 0 0 0 0 0 2 1 0 0 0 1 0 3 0 2 1 0 0 1 0 0 11 0 1276.5976 Q92503 Q92503 136 146 SEC14L1 SEC14-like protein 1 yes yes 2 8.3379E-05 164.97 By MS/MS 5 0 1 1 369930 369930 0 12084 2047 12839 30565 24350 24350 1 3710.2 0 SFFGPLELVEK KHGLKVKKSFIGQNKSFFGPLELVEKLCPE GQNKSFFGPLELVEKLCPEASDIATSVRNL K S F E K L 0 0 0 0 0 0 2 1 0 0 2 1 0 2 1 1 0 0 0 1 0 0 11 0 1264.6703 Q96T51 Q96T51 172 182 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 0.00021189 125.75 By MS/MS 5.5 0.5 1 1 2 443990 443990 0 12085 2238 12840 30566;30567 24351;24352 24352 2 3927.7 0 SFGGGTGSGFTSLLMER LAEQCGGLQGFLIFRSFGGGTGSGFTSLLM GGGTGSGFTSLLMERLTGEYSRKTKLEFSV R S F E R L 0 1 0 0 0 0 1 5 0 0 2 0 1 2 0 3 2 0 0 0 0 0 17 0 1702.7985 A6NHL2 A6NHL2 147 163 TUBAL3 Tubulin alpha chain-like 3 yes yes 2 0.0009739 115.12 By MS/MS 6 0 2 2 2274600 2274600 0 12086 22 12841;12842 30568;30569 24353;24354 24353 8 2 15636 0 SFGSTCQLSEK TFDSQTKENMTLQPKSFGSTCQLSEKFIKA LQPKSFGSTCQLSEKFIKAAIGCGIVESIL K S F E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 3 1 0 0 0 0 0 11 0 1242.5551 P11388 P11388 387 397 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00027042 136.96 By MS/MS 3.5 0.5 1 1 2 1025500 1025500 0 12087 578 12843 30570;30571 24355 24355 1 64738 0 SFLDSGYR AKAVAGNISDPGLQKSFLDSGYRILGAVAK SDPGLQKSFLDSGYRILGAVAKVREAFQPQ K S F Y R I 0 1 0 1 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 0 0 0 8 0 943.43995 P18206 P18206 816 823 VCL Vinculin yes yes 2 0.020914 98.629 By MS/MS 3 0 1 1 789320 789320 0 12088 653 12844 30572 24356 24356 1 14442 0 SFLESIDDALAEK DVRRVLLQAFDVVERSFLESIDDALAEKAS ERSFLESIDDALAEKASLQSQLPEGVPQHQ R S F E K A 2 0 0 2 0 0 2 0 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1436.7035 Q15750 Q15750 116 128 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 6.8597E-08 249.83 By MS/MS 6 0 1 1 2308000 2308000 0 12089 1528 12845 30573 24357 24357 1 15866 0 SFLLIHESCK KEEKKKNSVDPDFLKSFLLIHESCKAYGAT PDFLKSFLLIHESCKAYGATPSRYMTFLHV K S F C K A 0 0 0 0 1 0 1 0 1 1 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1232.6223 Q8NCM8 Q8NCM8 2854 2863 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00079848 125.48 By MS/MS 2 0 1 1 222500 222500 0 12090 1952 12846 30574 24358 24358 1 75259 0 SFLLKDSETSQR GLEVKSKTAKLQDFKSFLLKDSETSQRLAN DFKSFLLKDSETSQRLANLRQRVEQFARAF K S F Q R L 0 1 0 1 0 1 1 0 0 0 2 1 0 1 0 3 1 0 0 0 0 0 12 1 1409.7151 P34897 P34897 470 481 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.016645 107.34 By MS/MS 6 0 1 1 3068800 3068800 0 12091 809 12847 30575 24359 24359 0 21096 0 SFLSQGQVLK PLEEATLSELKTVLKSFLSQGQVLKLEAKT KTVLKSFLSQGQVLKLEAKTDPSILGGMIV K S F L K L 0 0 0 0 0 2 0 1 0 0 2 1 0 1 0 2 0 0 0 1 0 0 10 0 1105.6132 P48047 P48047 163 172 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 5.3897E-16 247.58 By MS/MS By matching 9 0.707 1 2 1 3 1 37688000 37627000 61033 12092 932 12848 30576;30577;30578;30579 24360;24361;24362 24361 3 717340 139170 SFPGFQAFCETQGDR SGGLPQFGDEYDFYRSFPGFQAFCETQGDR SFPGFQAFCETQGDRLLQCMSRVMQYHGCR R S F D R L 1 1 0 1 1 2 1 2 0 0 0 0 0 3 1 1 1 0 0 0 0 0 15 0 1745.7468 Q01780 Q01780 65 79 EXOSC10 Exosome component 10 yes yes 2 0.00041044 147.73 By MS/MS 4 0 1 1 561420 561420 0 12093 1269 12849 30580 24363;24364 24364 2 52834 0 SFPVNSDVGVLK LFTAESLIGLKNPEKSFPVNSDVGVLKWRL PEKSFPVNSDVGVLKWRLQTTEESFIPLTI K S F L K W 0 0 1 1 0 0 0 1 0 0 1 1 0 1 1 2 0 0 0 3 0 0 12 0 1260.6714 P48444 P48444 352 363 ARCN1 Coatomer subunit delta yes yes 2 0.049926 77.288 By MS/MS 6 0 1 1 3801900 3801900 0 12094 934 12850 30581 24365 24365 1 26135 0 SFQNQIAAIQR IAWDKGEKRNLEVLRSFQNQIAAIQRDAVW EVLRSFQNQIAAIQRDAVWWLHTVVPSISK R S F Q R D 2 1 1 0 0 3 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 11 0 1274.6731 Q8N201 Q8N201 577 587 INTS1 Integrator complex subunit 1 yes yes 2 3.2132E-09 212.21 By MS/MS 2 0 1 1 430140 430140 0 12095 1907 12851 30582 24366 24366 1 145490 0 SFQQSSLSR ______________________________ ______________________________ K S F S R D 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 0 9 0 1038.5094 P43243 P43243 4 12 MATR3 Matrin-3 yes yes 2 0.010375 99.788 By MS/MS 4 0 1 1 478220 478220 0 12096 893 12852 30583 24367 24367 1 45004 0 SFRPGDIVLAK EDVRATEKDKVEIYKSFRPGDIVLAKVISL EIYKSFRPGDIVLAKVISLGDAQSNYLLTT K S F A K V 1 1 0 1 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 11 1 1201.6819 Q9Y3B2 Q9Y3B2 121 131 EXOSC1 Exosome complex component CSL4 yes yes 2;3 0.0017478 126.66 By MS/MS 9 0 2 2 1557800 1557800 0 12097 2863 12853 30584;30585 24368;24369 24369 2 30658 0 SFSAASAITPSVSR MSRQSSVSFRSGGSRSFSAASAITPSVSRT RSFSAASAITPSVSRTSFSSVSRSGGGGGG R S F S R T 3 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 1 0 0 1 0 0 14 0 1379.7045 CON__Q922U2 CON__Q922U2 16 29 yes yes 2 0.04218 87.184 By MS/MS 2 0 1 1 79766 0 79766 + 12098 74 12854 30586 24370 24370 1 0 112800 SFSKEVEER RGDRLDRARTPATKRSFSKEVEERSRERPS TPATKRSFSKEVEERSRERPSQPEGLRKAA R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 Q04637 Q04637 1185 1193 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 9.1131E-10 210.6 By MS/MS 2.92 1.5 2 4 2 2 1 1 12 20077000 20077000 0 12099 1291 12855 30587;30588;30589;30590;30591;30592;30593;30594;30595;30596;30597;30598 24371;24372;24373;24374;24375;24376;24377;24378;24379 24371 9 5388800 0 SFSLASSSNSPISQR HTEAIGKNNPPLKSRSFSLASSSNSPISQR SFSLASSSNSPISQRRPSQNAISFFNVGHS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 2.3125E-05 198.52 By MS/MS 4 0 1 1 1000900 1000900 0 12100 2356 12856 30599 24380 24380 1 94190 0 SFSPLQPGQAPTGR LQGSRHRAEVASALRSFSPLQPGQAPTGRA RSFSPLQPGQAPTGRAHSTMTGSGVDARTA R S F G R A 1 1 0 0 0 2 0 2 0 0 1 0 0 1 3 2 1 0 0 0 0 0 14 0 1441.7314 Q7Z3C6 Q7Z3C6 654 667 ATG9A Autophagy-related protein 9A yes yes 2 0.0058033 101.72 By MS/MS 1.5 0.5 1 1 2 491230 491230 0 12101 1781 12857 30600;30601 24381 24381 1 141420 0 SFSSPENFQR RTMDNMTSSAQIIQRSFSSPENFQRQAVMN QIIQRSFSSPENFQRQAVMNSALRQMSYGG R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 Q9Y580 Q9Y580 134 143 RBM7 RNA-binding protein 7 yes yes 2 0.015116 104.01 By MS/MS 8 0 1 1 635960 635960 0 12102 2907 12858 30602 24382 24382 0 8029 0 SFSSQRPVDR VGENVLPPKREIAKRSFSSQRPVDRQNRRG EIAKRSFSSQRPVDRQNRRGNNGPPKSGRN R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 Q9Y520 Q9Y520 1542 1551 PRRC2C Protein PRRC2C yes yes 2 0.027748 104.2 By MS/MS By matching 1.33 0.471 2 1 2 1 1798400 1492400 305960 12103 2905 12859 30603;30604;30605 24383 24383 1 442430 305960 SFSTASAITPSVSR MSRQSSVSFRSGGSRSFSTASAITPSVSRT RSFSTASAITPSVSRTSFTSVSRSGGGGGG R S F S R T 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 2 0 0 1 0 0 14 0 1409.7151 CON__P13647;P13647 CON__P13647 16 29 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.55E-20 233.13 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 37073000 16023000 21050000 + 12104 52 12860 30606;30607;30608;30609;30610;30611;30612;30613;30614;30615;30616;30617;30618;30619;30620;30621;30622;30623;30624 24384;24385;24386;24387;24388;24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402;24403 24392 20 1113100 16846000 SFTASCPVSAFVPK QDECKKKGLPWTLAKSFTASCPVSAFVPKE KSFTASCPVSAFVPKEKIPDPHKLKLWLKV K S F P K E 2 0 0 0 1 0 0 0 0 0 0 1 0 2 2 3 1 0 0 2 0 0 14 0 1496.7334 Q6P587 Q6P587 124 137 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2 4.5508E-05 189.17 By MS/MS 8.5 0.5 1 1 2 777850 777850 0 12105 1712 12861 30625;30626 24404;24405 24404 2 10905 0 SFTPVFLGSALK ISDLKLAIRRATLKRSFTPVFLGSALKNKG LKRSFTPVFLGSALKNKGVQPLLDAVLEYL R S F L K N 1 0 0 0 0 0 0 1 0 0 2 1 0 2 1 2 1 0 0 1 0 0 12 0 1265.702 Q96RP9 Q96RP9 291 302 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0047023 104.43 By MS/MS 5.5 1.12 1 1 1 1 4 4448700 4448700 0 12106 2223 12862 30627;30628;30629;30630 24406;24407;24408 24408 3 52393 0 SFVAYEELIK ______________________________ ______________________________ M S F I K E 1 0 0 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1197.6281 Q96FX7 Q96FX7 2 11 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes yes 2 0.0015225 118.18 By MS/MS 8 0 1 1 25485 25485 0 12107 2155 12863 30631 24409 24409 1 321.75 0 SFVELSGAER RGDGGKMAAAGALERSFVELSGAERERPRH GALERSFVELSGAERERPRHFREFTVCSIG R S F E R E 1 1 0 0 0 0 2 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1093.5404 Q12769 Q12769 44 53 NUP160 Nuclear pore complex protein Nup160 yes yes 2 0.011135 102.06 By MS/MS 1 0 1 1 0 0 0 12108 1326 12864 30632 24410 24410 1 0 0 SFVIDHQR MENALASIGGFCCGRSFVIDHQRLSGQGYC GGFCCGRSFVIDHQRLSGQGYCFSASLPPL R S F Q R L 0 1 0 1 0 1 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 0 8 0 1000.509 O15269 O15269 322 329 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.024804 91.069 By MS/MS 6 0 1 1 5080700 5080700 0 12109 177 12865 30633 24411 24411 1 34926 0 SFYGSTLFLCR SLFSRVSLRLVGLKKSFYGSTLFLCRRPTP GLKKSFYGSTLFLCRRPTPQDSPIFLPVDD K S F C R R 0 1 0 0 1 0 0 1 0 0 2 0 0 2 0 2 1 0 1 0 0 0 11 0 1349.6438 P49327 P49327 1394 1404 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.7642E-05 166.07 By MS/MS 2.5 0.5 1 1 2 960320 960320 0 12110 946 12866 30634;30635 24412;24413;24414 24412 3 288710 0 SFYPEEVSSMVLTK AGRPKVQVEYKGETKSFYPEEVSSMVLTKM KSFYPEEVSSMVLTKMKEIAEAYLGKTVTN K S F T K M 0 0 0 0 0 0 2 0 0 0 1 1 1 1 1 3 1 0 1 2 0 0 14 0 1615.7804 P11142 P11142 113 126 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 3.1183E-11 237.76 By MS/MS 5.5 1.12 5 1 6 17408000 17408000 0 12111 572 12867;12868 30636;30637;30638;30639;30640;30641 24415;24416;24417;24418;24419;24420;24421 24416 264 7 174590 0 SGAALSKK EVKAEPVEVVAPRGKSGAALSKKSKGQVKE VVAPRGKSGAALSKKSKGQVKEEGINKSEK K S G K K S 2 0 0 0 0 0 0 1 0 0 1 2 0 0 0 2 0 0 0 0 0 0 8 1 760.4443 P09874 P09874 499 506 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.009298 136.27 By MS/MS 3.5 0.5 1 1 2 849810 849810 0 12112 543 12869 30642;30643 24422;24423 24422 2 59579 0 SGAAVCEFFLK QQLGAQPLPFPGMDKSGAAVCEFFLKAACG GMDKSGAAVCEFFLKAACGKGGMCPFRHIS K S G L K A 2 0 0 0 1 0 1 1 0 0 1 1 0 2 0 1 0 0 0 1 0 0 11 0 1227.5958 O95639 O95639 36 46 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 2 0.0014186 112.71 By MS/MS 8 0 1 1 169670 169670 0 12113 420 12870 30644 24424 24424 1 2142.1 0 SGAAWTCQQLR EFFDDPKNWGQEKVKSGAAWTCQQLRNKSN EKVKSGAAWTCQQLRNKSNEDLHKLWYVLL K S G L R N 2 1 0 0 1 2 0 1 0 0 1 0 0 0 0 1 1 1 0 0 0 0 11 0 1276.5983 Q9HD33 Q9HD33 81 91 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 2.0888E-18 254.82 By MS/MS 9 0 1 1 2050000 2050000 0 12114 2518 12871 30645 24425 24425 1 40344 0 SGAGVPAVILR SVRNQVEDLLATLEKSGAGVPAVILRRPNQ TLEKSGAGVPAVILRRPNQSQPLPPSSLQR K S G L R R 2 1 0 0 0 0 0 2 0 1 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1038.6186 Q92542 Q92542 404 414 NCSTN Nicastrin yes yes 2 0.034119 78.264 By MS/MS 3.5 0.5 1 1 2 1516400 1516400 0 12115 2052 12872 30646;30647 24426 24426 1 121220 0 SGALDVLQMK ______________________________ ______________________________ M S G M K E 1 0 0 1 0 1 0 1 0 0 2 1 1 0 0 1 0 0 0 1 0 0 10 0 1060.5587 P08865 P08865 2 11 RPSA 40S ribosomal protein SA yes yes 2 0.001353 119.68 By MS/MS 8 1.41 2 1 3 1592100 1592100 0 12116 529 12873;12874 30648;30649;30650 24427;24428;24429 24429 231 3 27805 0 SGALDVLQMKEEDVLK ______________________________ GALDVLQMKEEDVLKFLAAGTHLGGTNLDF M S G L K F 1 0 0 2 0 1 2 1 0 0 3 2 1 0 0 1 0 0 0 2 0 0 16 1 1773.9183 P08865 P08865 2 17 RPSA 40S ribosomal protein SA yes yes 2 3.3402E-56 345.64 By MS/MS By MS/MS 8.12 1.45 1 3 2 2 7 1 5935900 5877300 58598 12117 529 12875;12876 30651;30652;30653;30654;30655;30656;30657;30658 24430;24431;24432;24433;24434;24435;24436;24437;24438 24435 231 9 91325 105530 SGALLACGIVNSGVR TQIDKYLYSSEDYIKSGALLACGIVNSGVR SGALLACGIVNSGVRNECDPALALLSDYVL K S G V R N 2 1 1 0 1 0 0 3 0 1 2 0 0 0 0 2 0 0 0 2 0 0 15 0 1472.7769 Q13200 Q13200 442 456 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 2.8041E-11 241.39 By MS/MS 4.5 0.5 1 1 2 8362400 8362400 0 12118 1365 12877 30659;30660 24439;24440 24439 2 685640 0 SGANINR EINIDHKFHRHLIGKSGANINRIKDQYKVS FHRHLIGKSGANINRIKDQYKVSVRIPPDS K S G N R I 1 1 2 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 7 0 730.3722 Q00341 Q00341 454 460 HDLBP Vigilin yes yes 2 0.042447 95.352 By MS/MS 3 0.816 1 1 1 3 2295000 2295000 0 12119 1260 12878 30661;30662;30663 24441 24441 1 597100 0 SGANVLICGPNGCGK PNGDVLIRDLNFEVRSGANVLICGPNGCGK SGANVLICGPNGCGKSSLFRVLGELWPLFG R S G G K S 1 0 2 0 2 0 0 4 0 1 1 1 0 0 1 1 0 0 0 1 0 0 15 0 1502.697 P28288 P28288 465 479 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 4.7753E-05 193.22 By MS/MS 5 0 1 1 2774900 2774900 0 12120 752 12879 30664 24442;24443 24443 2 27831 0 SGATAGAAGGR ______________________________ VAPRSGATAGAAGGRGKGAYQDRDKPAQIR R S G G R G 4 1 0 0 0 0 0 4 0 0 0 0 0 0 0 1 1 0 0 0 0 0 11 0 874.42569 P50991 P50991 9 19 CCT4 T-complex protein 1 subunit delta yes yes 2 1.3962E-06 185.81 By MS/MS 8 1.41 1 1 1 1 1 5 12731000 12731000 0 12121 985 12880 30665;30666;30667;30668;30669 24444;24445;24446;24447;24448 24444 5 142420 0 SGAVTFSSQGR NSFSKSTNSSDVSAKSGAVTFSSQGRVNPF VSAKSGAVTFSSQGRVNPFKVSASSKEPAM K S G G R V 1 1 0 0 0 1 0 2 0 0 0 0 0 1 0 3 1 0 0 1 0 0 11 0 1095.5309 O75717 O75717 900 910 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0050144 103.88 By MS/MS 3 0 1 1 371040 371040 0 12122 342 12881 30670 24449 24449 1 6789 0 SGAYLIPLLER SGRDILARAKNGTGKSGAYLIPLLERLDLK GTGKSGAYLIPLLERLDLKKDNIQAMVIVP K S G E R L 1 1 0 0 0 0 1 1 0 1 3 0 0 0 1 1 0 0 1 0 0 0 11 0 1230.6972 P26196 P26196 147 157 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 2 0.00037084 117.7 By MS/MS 6 0 1 1 1082000 1082000 0 12123 729 12882 30671 24450 24450 1 7438 0 SGDGITFGVFGSK VNEEKMQNGFSRTLKSGDGITFGVFGSKFR LKSGDGITFGVFGSKFRIEYEPLVACSSCL K S G S K F 0 0 0 1 0 0 0 4 0 1 0 1 0 2 0 2 1 0 0 1 0 0 13 0 1270.6194 O60934 O60934 93 105 NBN Nibrin yes yes 2 0.0079902 116.84 By MS/MS 4 0 1 1 280390 280390 0 12124 287 12883 30672 24451 24451 1 26387 0 SGDLFNCGSLTIR AFDQIVNEAAKYRYRSGDLFNCGSLTIRSP YRSGDLFNCGSLTIRSPWGCVGHGALYHSQ R S G I R S 0 1 1 1 1 0 0 2 0 1 2 0 0 1 0 2 1 0 0 0 0 0 13 0 1438.6875 P21953 P21953 171 183 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes yes 2 4.3686E-08 220.29 By MS/MS 7 0 1 1 705020 705020 0 12125 684 12884 30673 24452 24452 1 11068 0 SGDLYVLAADK CYMPESKYAVVKCSKSGDLYVLAADKVASV KCSKSGDLYVLAADKVASVASTLETTFETI K S G D K V 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1150.587 Q9NSE4 Q9NSE4 326 336 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00074317 126.71 By MS/MS 4 0 1 1 1643700 1643700 0 12126 2570 12885 30674 24453 24453 1 154680 0 SGDSEVYQLGDVSQK NPVTIFSLATNEMWRSGDSEVYQLGDVSQK SGDSEVYQLGDVSQKTTWHRISVFRPGLRD R S G Q K T 0 0 0 2 0 2 1 2 0 0 1 1 0 0 0 3 0 0 1 2 0 0 15 0 1610.7424 Q04837 Q04837 67 81 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 8.5477E-41 283.47 By MS/MS By MS/MS 10 0 4 2 2 20406000 17853000 2552200 12127 1293 12886 30675;30676;30677;30678 24454;24455;24456;24457;24458 24456 5 962230 3267500 SGDVIEYLLK RGLQNHPMVLPICSRSGDVIEYLLKNQWFV PICSRSGDVIEYLLKNQWFVRCQEMGARAA R S G L K N 0 0 0 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1135.6125 Q5ST30 Q5ST30 468 477 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 6.4448E-05 156.35 By MS/MS 4.5 0.5 1 1 2 628330 628330 0 12128 1621 12887 30679;30680 24459;24460 24459 2 49373 0 SGEGEVSGLMR YSSAEPHVSGVKRSRSGEGEVSGLMRKVPR KRSRSGEGEVSGLMRKVPRVSLERLDLDLT R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 Q13263 Q13263 473 483 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.00010416 151.22 By MS/MS By MS/MS 4.33 0.943 1 3 1 1 5 1 6632300 6613800 18577 12129 1367 12888;12889 30681;30682;30683;30684;30685;30686 24461;24462;24463 24462 797 3 566820 39581 SGELAQEYDKR KNPKERTALFEEISRSGELAQEYDKRKKEM EISRSGELAQEYDKRKKEMVKAEEDTQFNY R S G K R K 1 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1294.6153 Q14683 Q14683 161 171 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 4.5965E-05 169.99 By MS/MS 2.5 0.5 2 2 4 2692600 2692600 0 12130 1451 12890 30687;30688;30689;30690 24464;24465 24464 2 77951 0 SGELPPNINIKEPR ______________________________ MSGELPPNINIKEPRWDQSTFIGRANHFFT M S G P R W 0 1 2 0 0 0 2 1 0 2 1 1 0 0 3 1 0 0 0 0 0 0 14 1 1562.8417 Q9H9B4 Q9H9B4 2 15 SFXN1 Sideroflexin-1 yes yes 2 0.00027391 169.65 By MS/MS 7.5 0.5 1 1 2 21362000 21362000 0 12131 2485 12891 30691;30692 24466;24467;24468;24469;24470;24471;24472;24473;24474 24467 9 272120 0 SGELQGGPDDNLIEGGGTK MSAYLREQRRELYSRSGELQGGPDDNLIEG QGGPDDNLIEGGGTKFVCKPGARNITVIFH R S G T K F 0 0 1 2 0 1 2 6 0 1 2 1 0 0 1 1 1 0 0 0 0 0 19 0 1842.8595 Q96A65 Q96A65 468 486 EXOC4 Exocyst complex component 4 yes yes 2 1.4188E-24 270.99 By MS/MS 4.5 0.5 1 1 2 3394200 3394200 0 12132 2104 12892 30693;30694 24475 24475 1 287510 0 SGENAASLANELAK NCTSHWVNQLAQKIRSGENAASLANELAKH RSGENAASLANELAKHTKGPVFAGDVSSSV R S G A K H 4 0 2 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1373.6787 O95490 O95490 535 548 LPHN2 Latrophilin-2 yes yes 2 0.007034 98.253 By MS/MS 4 0 1 1 1203300 1203300 0 12133 415 12893 30695 24476 24476 1 113240 0 SGEQCSVEPDLISK EVVSSTVRAVIATLRSGEQCSVEPDLISKV RSGEQCSVEPDLISKVLQGLIEVRSPHLEE R S G S K V 0 0 0 1 1 1 2 1 0 1 1 1 0 0 1 3 0 0 0 1 0 0 14 0 1547.7137 Q8N201 Q8N201 1530 1543 INTS1 Integrator complex subunit 1 yes yes 2 6.2074E-08 222.73 By MS/MS 2 0 1 1 338410 338410 0 12134 1907 12894 30696 24477 24477 1 114460 0 SGEQVPLLLK GRTELAIKLLEYEPRSGEQVPLLLKMKRSK EYEPRSGEQVPLLLKMKRSKLALSKAIESG R S G L K M 0 0 0 0 0 1 1 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 10 0 1082.6336 Q9H269 Q9H269 545 554 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 0.035175 79.489 By MS/MS 4 0 1 1 1249500 1249500 0 12135 2427 12895 30697 24478 24478 1 117590 0 SGERPVTAGEEDEQVPDSIDAR GGGLLENANPLIYQRSGERPVTAGEEDEQV AGEEDEQVPDSIDAREIFDLIRSINDPEHP R S G A R E 2 2 0 3 0 1 4 2 0 1 0 0 0 0 2 2 1 0 0 2 0 0 22 1 2356.0779 Q9Y3D0 Q9Y3D0 23 44 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 3 3.1434E-06 143.52 By MS/MS 9.5 0.5 1 1 2 3706900 3706900 0 12136 2870 12896 30698;30699 24479;24480 24480 2 158350 0 SGEVLVNVK IAGHESGELNQYSAKSGEVLVNVKEHSRQI NQYSAKSGEVLVNVKEHSRQINDIQLSRDM K S G V K E 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 3 0 0 9 0 943.53385 Q13347 Q13347 177 185 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.00070687 140.35 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 41150000 40967000 182370 12137 1372 12897 30700;30701;30702;30703;30704;30705 24481;24482;24483 24482 3 641510 296820 SGEVLVNVKEHSR IAGHESGELNQYSAKSGEVLVNVKEHSRQI AKSGEVLVNVKEHSRQINDIQLSRDMTMFV K S G S R Q 0 1 1 0 0 0 2 1 1 0 1 1 0 0 0 2 0 0 0 3 0 0 13 1 1452.7685 Q13347 Q13347 177 189 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3;4 2.1026E-11 244.71 By MS/MS By matching 7.62 0.696 4 3 1 7 1 81911000 81803000 108740 12138 1372 12898 30706;30707;30708;30709;30710;30711;30712;30713 24484;24485;24486;24487;24488 24485 5 1232000 195830 SGFGEISSPVIR ______________________________ MDRSGFGEISSPVIREAEVTRTARKQSAQK R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 P57740 P57740 4 15 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.00018878 151.22 By MS/MS 4 0 1 1 1930800 1930800 0 12139 1082 12899 30714 24489 24489 1 181700 0 SGFNPNQGFFK DGGGIFREFLNELLKSGFNPNQGFFKTTNE ELLKSGFNPNQGFFKTTNEGLLYPNPAAQM K S G F K T 0 0 2 0 0 1 0 2 0 0 0 1 0 3 1 1 0 0 0 0 0 0 11 0 1241.5829 Q15386 Q15386 783 793 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.0054901 102.62 By MS/MS 4 0 1 1 985200 985200 0 12140 1505 12900 30715 24490 24490 1 92714 0 SGFSSISVSR RGFSASSARLPGVSRSGFSSISVSRSRGSG PGVSRSGFSSISVSRSRGSGGLGGACGGAG R S G S R S 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 5 0 0 0 1 0 0 10 0 1025.5142 CON__P04259;CON__P48668;P48668 CON__P04259 31 40 KRT6C Keratin, type II cytoskeletal 6C no no 2 0.00015798 156.83 By MS/MS By MS/MS 4.57 2.69 2 2 2 2 2 2 1 1 6 8 33304000 6544800 26759000 + 12141 44;56 12901 30716;30717;30718;30719;30720;30721;30722;30723;30724;30725;30726;30727;30728;30729 24491;24492;24493;24494;24495;24496;24497;24498;24499;24500;24501;24502 24497 12 409650 33031000 SGFSSVSVSR RGFSANSARLPGVSRSGFSSVSVSRSRGSG PGVSRSGFSSVSVSRSRGSGGLGGACGGAG R S G S R S 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 5 0 0 0 2 0 0 10 0 1011.4985 CON__P02538;P02538 CON__P02538 31 40 KRT6A Keratin, type II cytoskeletal 6A yes no 2 0.00030244 142 By MS/MS By MS/MS 2.4 1.02 1 2 1 1 4 1 13141000 6322200 6818600 + 12142 40 12902 30730;30731;30732;30733;30734 24503;24504;24505;24506;24507 24506 5 563760 9642800 SGGGFSSGSAGIINYQR ______________________________ GGFSSGSAGIINYQRRTTSSSTRRSGGGGG R S G Q R R 1 1 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 17 0 1656.7856 CON__P04264;P04264 P04264 13 29 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.292E-54 307.03 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 83591000 57922000 25670000 + 12143 471;45 12903 30735;30736;30737;30738;30739;30740;30741;30742;30743;30744;30745;30746;30747;30748;30749;30750;30751;30752;30753;30754 24508;24509;24510;24511;24512;24513;24514;24515;24516;24517;24518;24519;24520;24521;24522;24523;24524;24525;24526;24527;24528 24509 21 3288500 20201000 SGGGFSSGSAGIINYQRR ______________________________ GFSSGSAGIINYQRRTTSSSTRRSGGGGGR R S G R R T 1 2 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 18 1 1812.8867 CON__P04264;P04264 P04264 13 30 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.00098138 102.4 By MS/MS By MS/MS 5.57 2.95 1 2 2 2 1 2 1 1 2 5 9 7849000 3652800 4196200 + 12144 471;45 12904 30755;30756;30757;30758;30759;30760;30761;30762;30763;30764;30765;30766;30767;30768 24529;24530;24531;24532;24533;24534;24535;24536;24537;24538;24539;24540;24541 24533 12 240270 4085800 SGGGGGGGFGR ITPSVSRTSFTSVSRSGGGGGGGFGRVSLA SVSRSGGGGGGGFGRVSLAGACGVGGYGSR R S G G R V 0 1 0 0 0 0 0 8 0 0 0 0 0 1 0 1 0 0 0 0 0 0 11 0 864.38383 CON__P13647;P13647 CON__P13647 38 48 KRT5 Keratin, type II cytoskeletal 5 no no 2 2.3839E-05 163.15 By MS/MS By MS/MS 5.41 2.85 2 1 2 2 2 2 1 2 1 2 9 8 41381000 15932000 25450000 + 12145 52 12905 30769;30770;30771;30772;30773;30774;30775;30776;30777;30778;30779;30780;30781;30782;30783;30784;30785 24542;24543;24544;24545;24546;24547;24548;24549;24550;24551;24552;24553 24545 12 1008900 20064000 SGGGGGGGGCGGGGGVSSLR MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG GGGGCGGGGGVSSLRISSSKGSLGGGFSSG R S G L R I 0 1 0 0 1 0 0 13 0 0 1 0 0 0 0 3 0 0 0 1 0 0 20 0 1548.6699 CON__P13645;P13645 CON__P13645 16 35 KRT10 Keratin, type I cytoskeletal 10 yes no 2 4.7751E-11 181.75 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 67486000 39728000 27759000 + 12146 50 12906 30786;30787;30788;30789;30790;30791;30792;30793;30794;30795;30796;30797;30798;30799;30800;30801;30802;30803;30804;30805 24554;24555;24556;24557;24558;24559;24560;24561;24562;24563;24564;24565;24566;24567;24568;24569;24570;24571;24572;24573;24574;24575;24576;24577 24565 24 2391800 30203000 SGGGGGGGGCGGGGGVSSLRISSSK MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG GGGGGVSSLRISSSKGSLGGGFSSGGFSGG R S G S K G 0 1 0 0 1 0 0 13 0 1 1 1 0 0 0 6 0 0 0 1 0 0 25 1 2050.945 CON__P13645;P13645 CON__P13645 16 40 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.0046478 67.214 By MS/MS 2.33 1.25 1 1 1 3 637770 0 637770 + 12147 50 12907 30806;30807;30808 24578;24579;24580;24581 24579 4 0 931450 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGGGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 1231.5905 P35527;CON__P35527 P35527 14 29 KRT9 Keratin, type I cytoskeletal 9 yes no 2 6.7322E-16 222.73 By MS/MS By MS/MS 5.21 2.8 3 3 3 4 4 2 2 4 1 3 12 17 445270000 274610000 170660000 + 12148 822 12908 30809;30810;30811;30812;30813;30814;30815;30816;30817;30818;30819;30820;30821;30822;30823;30824;30825;30826;30827;30828;30829;30830;30831;30832;30833;30834;30835;30836;30837 24582;24583;24584;24585;24586;24587;24588;24589;24590;24591;24592;24593;24594;24595;24596;24597;24598;24599;24600;24601;24602;24603;24604;24605;24606;24607;24608;24609;24610;24611;24612;24613;24614;24615;24616;24617;24618;24619;24620;24621;24622;24623;24624 24583 42 17649000 230910000 SGGGGGGGLGSGGSIRSSYSR ______________________________ GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS R S G S R F 0 2 0 0 0 0 0 10 0 1 1 0 0 0 0 6 0 0 1 0 0 0 21 1 1811.8511 P35527;CON__P35527 P35527 14 34 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.012846 70.235 By MS/MS By MS/MS 4.6 3.35 2 2 1 1 1 1 2 7 3 8194900 3719900 4475000 + 12149 822 12909 30838;30839;30840;30841;30842;30843;30844;30845;30846;30847 24625;24626;24627;24628;24629 24625 5 262050 5911200 SGGGVIRGPAGNNDCR ______________________________ GGGVIRGPAGNNDCRIYVGNLPPDIRTKDI M S G C R I 1 2 2 1 1 0 0 5 0 1 0 0 0 0 1 1 0 0 0 1 0 0 16 1 1585.7379 Q07955 Q07955 2 17 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 2 0.0099392 89.663 By MS/MS 8 0 1 1 545790 545790 0 12150 1304 12910 30848 24630 24630 1 6890.6 0 SGGGYIVVDPILR QSGSFQYYFLQGNEKSGGGYIVVDPILRVG EKSGGGYIVVDPILRVGADNHVLPLDCVTL K S G L R V 0 1 0 1 0 0 0 3 0 2 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1344.7402 P35573 P35573 102 114 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0017025 113.44 By MS/MS 3 0 1 1 175500 175500 0 12151 823 12911 30849 24631 24631 1 3211.1 0 SGGLGGSHALLLLR IPKKLLQKVFNDTCRSGGLGGSHALLLLRS RSGGLGGSHALLLLRSCGSLLPELKLEERT R S G L R S 1 1 0 0 0 0 0 4 1 0 5 0 0 0 0 2 0 0 0 0 0 0 14 0 1349.7779 P42704 P42704 115 128 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00073318 130.01 By MS/MS 3.75 0.829 2 1 1 4 1218300 1218300 0 12152 886 12912 30850;30851;30852;30853 24632;24633 24632 2 49239 0 SGGMSNELNNIISR ASKLYRPGSVAYVSRSGGMSNELNNIISRT RSGGMSNELNNIISRTTDGVYEGVAIGGDR R S G S R T 0 1 3 0 0 0 1 2 0 2 1 0 1 0 0 3 0 0 0 0 0 0 14 0 1490.7147 P53396 P53396 663 676 ACLY ATP-citrate synthase yes yes 2 1.1583E-09 225.79 By MS/MS 2.8 1.17 1 1 1 2 5 10838000 10838000 0 12153 1030 12913;12914 30854;30855;30856;30857;30858 24634;24635;24636;24637 24636 568 4 1052500 0 SGGSRSFSTASAITPSVSR ______________________________ RSFSTASAITPSVSRTSFTSVSRSGGGGGG R S G S R T 2 2 0 0 0 0 0 2 0 1 0 0 0 1 1 7 2 0 0 1 0 0 19 1 1853.9232 CON__P13647;P13647 CON__P13647 11 29 KRT5 Keratin, type II cytoskeletal 5 yes no 2;3 0.0027834 157.37 By MS/MS 1.67 0.471 1 2 3 567080 0 567080 + 12154 52 12915 30859;30860;30861 24638;24639;24640;24641 24640 4 0 769940 SGGTALHVAAAK QWLNSGHINDVRHAKSGGTALHVAAAKGYT HAKSGGTALHVAAAKGYTEVLKLLIQAGYD K S G A K G 4 0 0 0 0 0 0 2 1 0 1 1 0 0 0 1 1 0 0 1 0 0 12 0 1081.588 O14974 O14974 198 209 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 2 0.0080384 94.692 By MS/MS 3 0 1 1 438610 438610 0 12155 151 12916 30862 24642 24642 1 8025.4 0 SGGTEGLLAEK GDQSAINELMQMRLRSGGTEGLLAEKLEAL MRLRSGGTEGLLAEKLEALITQTRAKQAAT R S G E K L 1 0 0 0 0 0 2 3 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1060.5401 Q9UHB9 Q9UHB9 267 277 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00079187 125.74 By MS/MS 5 0 1 1 647170 647170 0 12156 2728 12917 30863 24643 24643 1 6490.8 0 SGGVGGSNTNWK AEGQALDGVSISDLKSGGVGGSNTNWKTLY DLKSGGVGGSNTNWKTLYEVKSENLGQGDK K S G W K T 0 0 2 0 0 0 0 4 0 0 0 1 0 0 0 2 1 1 0 1 0 0 12 0 1162.5367 P27694 P27694 432 443 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 3.3686E-05 172.56 By MS/MS 5 0 1 1 676380 676380 0 12157 744 12918 30864 24644 24644 1 6783.7 0 SGHIHHHDVR GSLSWNSYILSSGSRSGHIHHHDVRVAEHH SSGSRSGHIHHHDVRVAEHHVATLSGHSQE R S G V R V 0 1 0 1 0 0 0 1 4 1 0 0 0 0 0 1 0 0 0 1 0 0 10 0 1193.5802 Q12834 Q12834 287 296 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.013302 103.55 By MS/MS 6 0 1 1 71947 71947 0 12158 1332 12919 30865 24645 24645 1 494.58 0 SGIVEYLSLVK WVCDESVRKLSSAVRSGIVEYLSLVKGGQD SAVRSGIVEYLSLVKGGQDVKKKVHLSEKI R S G V K G 0 0 0 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 1 2 0 0 11 0 1206.686 P49642 P49642 183 193 PRIM1 DNA primase small subunit yes yes 2 7.4146E-05 156.83 By MS/MS 6 0 1 1 917610 917610 0 12159 953 12920 30866 24646 24646 1 6307.9 0 SGKKLEDGPK IACKFAELKEKIDRRSGKKLEDGPKFLKSG KIDRRSGKKLEDGPKFLKSGDAAIVDMVPG R S G P K F 0 0 0 1 0 0 1 2 0 0 1 3 0 0 1 1 0 0 0 0 0 0 10 2 1057.5768 Q5VTE0;P68104 Q5VTE0 383 392 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.0012925 148.91 By MS/MS 6.67 0.471 1 2 3 1292300 1292300 0 12160 1209 12921 30867;30868;30869 24647;24648 24647 2 19487 0 SGKLVFLGLDNAGK NGFSSVLQFLGLYKKSGKLVFLGLDNAGKT KSGKLVFLGLDNAGKTTLLHMLKDDRLGQH K S G G K T 1 0 1 1 0 0 0 3 0 0 3 2 0 1 0 1 0 0 0 1 0 0 14 1 1417.7929 Q9NR31 Q9NR31 25 38 SAR1A GTP-binding protein SAR1a yes yes 2 0.0022371 159.66 By MS/MS 9 0 1 1 257160 257160 0 12161 2546 12922 30870 24649 24649 1 5061 0 SGKPPLQNNEK LLHKRRRALGLHGKKSGKPPLQNNEKEGKK HGKKSGKPPLQNNEKEGKKERAVVDKVFFS K S G E K E 0 0 2 0 0 1 1 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 11 1 1210.6306 P28288 P28288 40 50 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 3 0.024753 103.21 By MS/MS 5 0 1 1 561160 561160 0 12162 752 12923 30871 24650 24650 1 5628.1 0 SGKSPILVATAVAAR DRSQRDREEALHQFRSGKSPILVATAVAAR SGKSPILVATAVAARGLDISNVKHVINFDL R S G A R G 4 1 0 0 0 0 0 1 0 1 1 1 0 0 1 2 1 0 0 2 0 0 15 1 1439.846 O00571;O15523 O00571 489 503 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.0031753 130.19 By MS/MS 5 0 1 1 3541400 3541400 0 12163 116 12924 30872 24651 24651 1 35518 0 SGKYDLDFKSPDDPSR KVVIGMDVAASEFFRSGKYDLDFKSPDDPS GKYDLDFKSPDDPSRYISPDQLADLYKSFI R S G S R Y 0 1 0 4 0 0 0 1 0 0 1 2 0 1 2 3 0 0 1 0 0 0 16 2 1825.8483 P06733 P06733 254 269 ENO1 Alpha-enolase yes yes 3 0.0051801 98.421 By MS/MS 6 0 1 1 4102400 4102400 0 12164 500 12925 30873 24652 24652 1 28201 0 SGLCIEASSR DDWSRDIQSGLSDSRSGLCIEASSRIMELD LSDSRSGLCIEASSRIMELDSNDGLLKVHY R S G S R I 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 3 0 0 0 0 0 0 10 0 1078.5077 Q8NCM8 Q8NCM8 551 560 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00017335 148.94 By MS/MS 2 0.816 1 1 1 3 501350 501350 0 12165 1952 12926 30874;30875;30876 24653 24653 1 110640 0 SGLELLK ADDEEEGVSPDTAIRSGLELLKVLSFTHPT VSPDTAIRSGLELLKVLSFTHPTSFHSAET R S G L K V 0 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 7 0 758.4538 Q29RF7 Q29RF7 658 664 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.016725 117.93 By MS/MS 3 0 1 1 306010 306010 0 12166 1565 12927 30877 24654 24654 1 5599.1 0 SGLNIAHFK DVPNPVFLEQKKMLKSGLNIAHFKQHVSII QKKMLKSGLNIAHFKQHVSIIEKETKEYFE K S G F K Q 1 0 1 0 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 9 0 985.53451 Q16850 Q16850 161 169 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 0.007968 104.01 By MS/MS 6 0 1 1 2519100 2519100 0 12167 1561 12928 30878 24655 24655 1 17317 0 SGLSDLAESLTNDNETNS GVHATPENLINALNKSGLSDLAESLTNDNE SDLAESLTNDNETNS_______________ K S G N S - 1 0 3 2 0 0 2 1 0 0 3 0 0 0 0 4 2 0 0 0 0 0 18 0 1865.8127 Q96FV9 Q96FV9 640 657 THOC1 THO complex subunit 1 yes yes 2 2.1243E-12 292.12 By MS/MS 4.5 0.5 1 1 2 341950 341950 0 12168 2154 12929 30879;30880 24656 24656 1 8061.4 0 SGLSSPIYIDLR LYDVQAFKFGDFVLKSGLSSPIYIDLRGIV VLKSGLSSPIYIDLRGIVSRPRLLSQVADI K S G L R G 0 1 0 1 0 0 0 1 0 2 2 0 0 0 1 3 0 0 1 0 0 0 12 0 1319.7085 P11172 P11172 30 41 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.001249 123.51 By MS/MS 6 0 1 1 1404400 1404400 0 12169 574 12930 30881 24657 24657 1 9654.2 0 SGLTGYIK VAFPPLEDKLEQKTKSGLTGYIKGIFGFRS KLEQKTKSGLTGYIKGIFGFRS________ K S G I K G 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q9UHB9 Q9UHB9 613 620 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0057266 122.13 By MS/MS 5 0 1 1 3624000 3624000 0 12170 2728 12931 30882 24658 24658 1 36347 0 SGMSHEEDQLIPNLYR LRWSKQTDVGITHFRSGMSHEEDQLIPNLY GMSHEEDQLIPNLYRYIQPWESEFIDSQRV R S G Y R Y 0 1 1 1 0 1 2 1 1 1 2 0 1 0 1 2 0 0 1 0 0 0 16 0 1887.8785 Q6P2Q9 Q6P2Q9 1355 1370 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.042466 64.675 By MS/MS 2 0 1 1 330710 330710 0 12171 1708 12932 30883 24659 24659 914 1 111860 0 SGNALFHASTLHR LMANYYNKVSTVFWKSGNALFHASTLHRLY WKSGNALFHASTLHRLYHLSREMRKNLTQD K S G H R L 2 1 1 0 0 0 0 1 2 0 2 0 0 1 0 2 1 0 0 0 0 0 13 0 1409.7164 Q14152 Q14152 286 298 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.7963E-05 190.66 By MS/MS 3.5 1.12 1 1 1 1 4 2175500 2175500 0 12172 1422 12933 30884;30885;30886;30887 24660 24660 1 102420 0 SGNELPLAVASTADLIR LQRYALNRITVWRSRSGNELPLAVASTADL NELPLAVASTADLIRCKLLDVTGGLGTDEL R S G I R C 3 1 1 1 0 0 1 1 0 1 3 0 0 0 1 2 1 0 0 1 0 0 17 0 1725.9261 Q9Y4W2 Q9Y4W2 80 96 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2 2.5327E-08 225.21 By MS/MS 4 0 1 1 280630 280630 0 12173 2901 12934 30888 24661 24661 1 26409 0 SGNGEVTFENVK APDSMFIVAFQLFDKSGNGEVTFENVKEIF FDKSGNGEVTFENVKEIFGQTIIHHHIPFN K S G V K E 0 0 2 0 0 0 2 2 0 0 0 1 0 1 0 1 1 0 0 2 0 0 12 0 1279.6044 O75746 O75746 101 112 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0041122 106.16 By MS/MS 5 0 1 1 653700 653700 0 12174 344 12935 30889 24662 24662 1 6556.2 0 SGNIVAGIANESK DSVDKVADGFKVVARSGNIVAGIANESKKL ARSGNIVAGIANESKKLYGAQFHPEVGLTE R S G S K K 2 0 2 0 0 0 1 2 0 2 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1258.6517 P49915 P49915 170 182 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.004446 105.25 By MS/MS 5 0 1 1 805910 805910 0 12175 968 12936 30890 24663 24663 1 8082.9 0 SGNLDPAELAIVAAAQK IISGVEMQVLQEKLRSGNLDPAELAIVAAA NLDPAELAIVAAAQKKDFPHGIPECGTDAL R S G Q K K 5 0 1 1 0 1 1 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 17 0 1666.889 Q5ST30 Q5ST30 687 703 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 1.086E-16 255.39 By MS/MS 4 0 1 1 939600 939600 0 12176 1621 12937 30891 24664 24664 1 88423 0 SGNLTEDDKHNNAK IDAIQPGCINYDLVKSGNLTEDDKHNNAKY KSGNLTEDDKHNNAKYAVSMARRIGARVYA K S G A K Y 1 0 3 2 0 0 1 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 14 1 1541.707 P13797 P13797 574 587 PLS3 Plastin-3 yes yes 3 0.029092 68.463 By MS/MS 5 0 1 1 203200 203200 0 12177 605 12938 30892 24665 24665 1 2038 0 SGPEEQPRDTASPVPA PNCEVVGVDWAEGLKSGPEEQPRDTASPVP GPEEQPRDTASPVPA_______________ K S G P A - 2 1 0 1 0 1 2 1 0 0 0 0 0 0 4 2 1 0 0 1 0 0 16 1 1636.7693 Q9NW81 Q9NW81 242 257 ATP5SL ATP synthase subunit s-like protein yes yes 2 0.00035 191.29 By MS/MS 8 0 1 1 2507100 2507100 0 12178 2608 12939 30893 24666 24666 1 31652 0 SGPEPLQEGPGPK ATVCKDGRVRVYRPRSGPEPLQEGPGPKGG PRSGPEPLQEGPGPKGGRGARIVWVCDGRC R S G P K G 0 0 0 0 0 1 2 3 0 0 1 1 0 0 4 1 0 0 0 0 0 0 13 0 1291.6408 P57737 P57737 668 680 CORO7 Coronin-7 yes yes 2 0.000323 149.94 By MS/MS 4 0 1 1 1301200 1301200 0 12179 1081 12940 30894 24667 24667 1 122450 0 SGPFGQLFR AALVDLEPGTMDSVRSGPFGQLFRPDNFIF TMDSVRSGPFGQLFRPDNFIFGQTGAGNNW R S G F R P 0 1 0 0 0 1 0 2 0 0 1 0 0 2 1 1 0 0 0 0 0 0 9 0 1007.5189 Q9BUF5 Q9BUF5 78 86 TUBB6 Tubulin beta-6 chain yes yes 2 0.00076404 136.27 By MS/MS 6 0 1 1 0 0 0 12180 2324 12941 30895 24668 24668 1 0 0 SGPGLIGLGIK EGQQYCCRLVEMDSKSGPGLIGLGIKALQD MDSKSGPGLIGLGIKALQDKKYEDAVRNLT K S G I K A 0 0 0 0 0 0 0 4 0 2 2 1 0 0 1 1 0 0 0 0 0 0 11 0 1010.6124 Q6PGP7 Q6PGP7 271 281 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 1.5293E-05 168.26 By MS/MS 3 0 1 1 512640 512640 0 12181 1716 12942 30896 24669 24669 1 9379.8 0 SGPIFIVVPNGK KKMPSKTSLKEDEDKSGPIFIVVPNGKEQR EDKSGPIFIVVPNGKEQRMKDEKGLKVLKW K S G G K E 0 0 1 0 0 0 0 2 0 2 0 1 0 1 2 1 0 0 0 2 0 0 12 0 1226.7023 Q14008 Q14008 1157 1168 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0083305 108.57 By MS/MS 2 0 1 1 247970 247970 0 12182 1417 12943 30897 24670 24670 1 83873 0 SGPLGDQPFAGLLPK TEARHQRQPRGSCQRSGPLGDQPFAGLLPK SGPLGDQPFAGLLPKNLSREELVDALRAAV R S G P K N 1 0 0 1 0 1 0 3 0 0 3 1 0 1 3 1 0 0 0 0 0 0 15 0 1495.8035 Q6P087 Q6P087 54 68 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 0.00045809 145.29 By MS/MS 8 0 1 1 182380 182380 0 12183 1696 12944 30898 24671 24671 1 2302.5 0 SGPNIYELR QLLLEFSFWNEPVPRSGPNIYELRSYQLRP NEPVPRSGPNIYELRSYQLRPGTMIEWGNY R S G L R S 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 9 0 1047.5349 O75323 O75323 182 190 GBAS Protein NipSnap homolog 2 yes yes 2 2.4677E-05 176.38 By MS/MS By matching 8.75 0.829 2 1 1 3 1 24172000 24083000 89370 12184 310 12945 30899;30900;30901;30902 24672 24672 1 314600 120600 SGQGDALASGPVETGPMKK DEEEDPLIYQHRMLRSGQGDALASGPVETG DALASGPVETGPMKKLHVSTINLQKAWGAA R S G K K L 2 0 0 1 0 1 1 4 0 0 1 2 1 0 2 2 1 0 0 1 0 0 19 1 1828.8989 P42345 P42345 1239 1257 MTOR Serine/threonine-protein kinase mTOR yes yes 3 0.046211 55.189 By MS/MS 2 0 1 1 258350 258350 0 12185 879 12946 30903 24673 24673 463 1 87385 0 SGQPVTADDLGVTGALTVLMK DMKARLGRMVVASDKSGQPVTADDLGVTGA ADDLGVTGALTVLMKDAIKPNLMQTLEGTP K S G M K D 2 0 0 2 0 1 0 3 0 0 3 1 1 0 1 1 3 0 0 3 0 0 21 0 2072.0824 Q6UB35 Q6UB35 639 659 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 1.032E-12 232.73 By MS/MS 4 0 1 1 328870 328870 0 12186 1728 12947 30904 24674 24674 919 1 30949 0 SGQSSRGEQHGSSSGSSSSYGQHGSGSR SGSGHSSSYEQHGSRSGQSSRGEQHGSSSG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS R S G S R Q 0 2 0 0 0 3 1 7 2 0 0 0 0 0 0 12 0 0 1 0 0 0 28 1 2724.1469 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1904 1931 HRNR Hornerin yes no 3;4 7.9158E-19 169.91 By matching By MS/MS 3.17 1.07 1 2 3 2 4 1621700 152970 1468700 + 12187 73 12948 30905;30906;30907;30908;30909;30910 24675;24676;24677 24677 3 14396 392960 SGQSSYGQHSSGSSQSSGYGQHGSR SGSGQSSGFGQHESRSGQSSYGQHSSGSSQ SGSSQSSGYGQHGSRQTSGFGQHGSGSSQS R S G S R Q 0 1 0 0 0 4 0 6 2 0 0 0 0 0 0 10 0 0 2 0 0 0 25 0 2499.0395 CON__Q5D862;Q5D862 CON__Q5D862 613 637 FLG2 Filaggrin-2 yes no 3;4 3.4232E-20 192.51 By MS/MS By MS/MS 4.4 2.42 1 1 2 2 1 2 1 3 7 6622400 1502900 5119500 + 12188 67 12949 30911;30912;30913;30914;30915;30916;30917;30918;30919;30920 24678;24679;24680;24681;24682;24683;24684 24680 7 52215 1413200 SGQVLEVSGSK YAEIVHLTLPDGTKRSGQVLEVSGSKAVVQ GTKRSGQVLEVSGSKAVVQVFEGTSGIDAK R S G S K A 0 0 0 0 0 1 1 2 0 0 1 1 0 0 0 3 0 0 0 2 0 0 11 0 1089.5666 P21281 P21281 83 93 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 0.00017603 145.23 By MS/MS 6 0 1 1 1736800 1736800 0 12189 675 12950 30921 24685 24685 1 11939 0 SGSDSSQADQEAK EGCGSAMKDVLLPLKSGSDSSQADQEAKEL LKSGSDSSQADQEAKELARQISFKAEVNSS K S G A K E 2 0 0 2 0 2 1 1 0 0 0 1 0 0 0 4 0 0 0 0 0 0 13 0 1308.543 Q9Y385 Q9Y385 165 177 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 2 6.3226E-07 203.03 By MS/MS 7 0 1 1 597110 597110 0 12190 2858 12951 30922 24686 24686 1 9373.6 0 SGSDSSQADQEAKELAR EGCGSAMKDVLLPLKSGSDSSQADQEAKEL SDSSQADQEAKELARQISFKAEVNSSGKTI K S G A R Q 3 1 0 2 0 2 2 1 0 0 1 1 0 0 0 4 0 0 0 0 0 0 17 1 1777.8078 Q9Y385 Q9Y385 165 181 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 0.019648 73.415 By MS/MS 7 0 1 1 927170 927170 0 12191 2858 12952 30923 24687 24687 1 14555 0 SGSGQSSGFGQHGSGSGQSSGFGQHESGSGK HGSSSGQTFGFGQHRSGSGQSSGFGQHGSG GQSSGFGQHESGSGKSSGFGQHESRSSQSN R S G G K S 0 0 0 0 0 4 1 11 2 0 0 1 0 2 0 10 0 0 0 0 0 0 31 0 2853.1935 CON__Q5D862;Q5D862 CON__Q5D862 953 983 FLG2 Filaggrin-2 yes no 3;4 2.1246E-19 166.57 By matching By MS/MS 2.25 0.968 2 3 2 1 1 7 2581400 365130 2216300 + 12192 67 12953 30924;30925;30926;30927;30928;30929;30930;30931 24688;24689;24690;24691;24692 24691 5 123500 807090 SGSGTMNLGGSLTR YKLTSTVMLWLQTNKSGSGTMNLGGSLTRQ KSGSGTMNLGGSLTRQMEKDETVSDCSPHI K S G T R Q 0 1 1 0 0 0 0 4 0 0 2 0 1 0 0 3 2 0 0 0 0 0 14 0 1336.6405 P47756 P47756 182 195 CAPZB F-actin-capping protein subunit beta yes yes 2 0.0010121 124.38 By MS/MS 8 0 1 1 547840 547840 0 12193 926 12954 30932 24693 24693 488 1 6916.4 0 SGSGWSSSR HGSGSGQSSSYGPYRSGSGWSSSRGPYESG SYGPYRSGSGWSSSRGPYESGSGHSSGLGH R S G S R G 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 909.39406 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1029 1037 HRNR Hornerin yes no 2 0.00035142 156.35 By MS/MS 3.5 0.5 1 1 2 1066800 0 1066800 + 12194 73 12955 30933;30934 24694 24694 1 0 208840 SGSLAVDNADPILK GILRNHLTQFSPHFKSGSLAVDNADPILKI KSGSLAVDNADPILKIPFASLASRLTLAEL K S G L K I 2 0 1 2 0 0 0 1 0 1 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1398.7355 P35573 P35573 876 889 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0038955 107.09 By MS/MS 3 0 1 1 396940 396940 0 12195 823 12956 30935 24695 24695 1 7262.9 0 SGSVLFTAGERWR ______________________________ ______________________________ M S G W R C 1 2 0 0 0 0 1 2 0 0 1 0 0 1 0 2 1 1 0 1 0 0 13 1 1464.7474 Q96QE5 Q96QE5 2 14 TEFM Transcription elongation factor, mitochondrial yes yes 2 0.0035427 104.2 By MS/MS 2 0 1 1 0 0 0 12196 2216 12957 30936 24696 24696 1 0 0 SGSWAAIYQDIR ______________________________ IDKSGSWAAIYQDIRHEASDFPCRVAKLPK K S G I R H 2 1 0 1 0 1 0 1 0 2 0 0 0 0 0 2 0 1 1 0 0 0 12 0 1365.6677 P18031 P18031 13 24 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 8.5179E-05 157.97 By MS/MS 6 0 1 1 1327800 1327800 0 12197 649 12958 30937 24697 24697 1 9127.8 0 SGSYSYLEER SSTSAGDRYDSLLGRSGSYSYLEERKPYSS SLLGRSGSYSYLEERKPYSSRLEKDDSTDF R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 2 0.00023653 144.65 By MS/MS 3 0 1 1 390840 390840 0 12198 151 12959 30938 24698 24698 1 7151.3 0 SGTFCLADTCLLLMDK EHGPVVVHCSAGIGRSGTFCLADTCLLLMD GTFCLADTCLLLMDKRKDPSSVDIKKVLLE R S G D K R 1 0 0 2 2 0 0 1 0 0 4 1 1 1 0 1 2 0 0 0 0 0 16 0 1843.8518 P18031 P18031 222 237 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 5.3356E-11 234.79 By MS/MS 6 0 1 1 621600 621600 0 12199 649 12960 30939 24699 24699 323 1 4273 0 SGTHNMYR LRVKNFGIWLRYDSRSGTHNMYREYRDLTT WLRYDSRSGTHNMYREYRDLTTAGAVTQCY R S G Y R E 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 1 0 0 0 8 0 964.4185 Q02543 Q02543 88 95 RPL18A 60S ribosomal protein L18a yes yes 2 0.0053896 123.69 By MS/MS 9 0 1 1 829460 829460 0 12200 1278 12961 30940 24700 24700 1 16324 0 SGTQDIQPGPLFNNNADGVATDITSTR GTGLLSSDYRIINGKSGTQDIQPGPLFNNN NNNADGVATDITSTRSLNYKSTSSGHREIS K S G T R S 2 1 3 3 0 2 0 3 0 2 1 0 0 1 2 2 4 0 0 1 0 0 27 0 2788.3264 Q7Z2W4 Q7Z2W4 417 443 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 1.5588E-12 157.73 By MS/MS 4 0 1 1 1555700 1555700 0 12201 1778 12962 30941 24701 24701 1 146410 0 SGTQSDKVTLK EIAEEYGGVMVSFPRSGTQSDKVTLKGAKD SFPRSGTQSDKVTLKGAKDCVEAAKKRIQE R S G L K G 0 0 0 1 0 1 0 1 0 0 1 2 0 0 0 2 2 0 0 1 0 0 11 1 1162.6194 Q00341 Q00341 840 850 HDLBP Vigilin yes yes 2;3 5.9308E-05 171.33 By MS/MS 3 0.707 1 2 1 4 3342000 3342000 0 12202 1260 12963 30942;30943;30944;30945 24702;24703 24702 2 133570 0 SGTSEFLNK MTREELVKNLGTIAKSGTSEFLNKMTEAQE LGTIAKSGTSEFLNKMTEAQEDGQSTSELI K S G N K M 0 0 1 0 0 0 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 9 0 981.47673 P14625 P14625 169 177 HSP90B1 Endoplasmin yes yes 2 0.011061 98.582 By MS/MS By matching 4 0 2 1 1 5460900 5345900 115000 12203 615 12964 30946;30947 24704 24704 1 503080 245040 SGTSSPEAVKK ______________________________ ______________________________ M S G K K L 1 0 0 0 0 0 1 1 0 0 0 2 0 0 1 3 1 0 0 1 0 0 11 1 1089.5666 Q7Z3U7 Q7Z3U7 2 12 MON2 Protein MON2 homolog yes yes 2 0.00086589 128.6 By MS/MS 2 0 1 1 926490 926490 0 12204 1787 12965 30948 24705 24705 1 313380 0 SGTTQNANESHIVVQALR TVLRGSGNLLRQLNKSGTTQNANESHIVVQ TQNANESHIVVQALRLNTMSKFTFTDCTRF K S G L R L 2 1 2 0 0 2 1 1 1 1 1 0 0 0 0 2 2 0 0 2 0 0 18 0 1923.9763 Q8NCM8 Q8NCM8 1886 1903 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 3 0.0041642 93.51 By MS/MS 1.5 0.5 1 1 2 833580 833580 0 12205 1952 12966 30949;30950 24706 24706 1 251910 0 SGTVDPQELQK LNGWRQHFISFDTDRSGTVDPQELQKALTT DTDRSGTVDPQELQKALTTMGFRLSPQAVN R S G Q K A 0 0 0 1 0 2 1 1 0 0 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1200.5986 P30626 P30626 117 127 SRI Sorcin yes yes 2 0.00013392 148.91 By MS/MS 9 0 1 1 538770 538770 0 12206 778 12967 30951 24707 24707 1 10603 0 SGTYLQGTFR FSEHLPLSKLQQGIKSGTYLQGTFRASREN QQGIKSGTYLQGTFRASRENYLEATVWIHG K S G F R A 0 1 0 0 0 1 0 2 0 0 1 0 0 1 0 1 2 0 1 0 0 0 10 0 1128.5564 Q9Y2L1 Q9Y2L1 243 252 DIS3 Exosome complex exonuclease RRP44 yes yes 2 2.45E-05 164.97 By MS/MS 4.5 1.12 1 1 1 1 4 5746500 5746500 0 12207 2834 12968 30952;30953;30954;30955 24708 24708 1 395050 0 SGVDADSSYFK WITNKMGKKRIENFKSGVDADSSYFKIFKT ENFKSGVDADSSYFKIFKTKHD________ K S G F K I 1 0 0 2 0 0 0 1 0 0 0 1 0 1 0 3 0 0 1 1 0 0 11 0 1174.5142 Q9Y394 Q9Y394 322 332 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 2 0.0011783 118.03 By MS/MS 7 0 1 1 848520 848520 0 12208 2859 12969 30956 24709 24709 1 13320 0 SGVGNIFIK PVRIMWSQRDPSLRKSGVGNIFIKNLDKSI DPSLRKSGVGNIFIKNLDKSIDNKALYDTF K S G I K N 0 0 1 0 0 0 0 2 0 2 0 1 0 1 0 1 0 0 0 1 0 0 9 0 933.52837 P11940;Q4VXU2;Q96DU9 P11940 96 104 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 2 0.0010118 133.86 By MS/MS By MS/MS 7.14 1.81 2 1 1 1 1 1 6 1 18778000 18694000 83465 12209 586 12970 30957;30958;30959;30960;30961;30962;30963 24710;24711;24712;24713 24711 4 198200 70093 SGVGNVFIK PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI DPSLRKSGVGNVFIKNLDKSIDNKALYDTF K S G I K N 0 0 1 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 0 2 0 0 9 0 919.51272 Q13310 Q13310 96 104 PABPC4 Polyadenylate-binding protein 4 no no 2 0.0031858 112.41 By MS/MS 5 0 1 1 4023100 4023100 0 12210 1369 12971 30964 24714 24714 1 40349 0 SGVGTALLLK VVGAQRDAWGPGAAKSGVGTALLLKLAQMF PGAAKSGVGTALLLKLAQMFSDMVLKDGFQ K S G L K L 1 0 0 0 0 0 0 2 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 957.58588 P02786 P02786 419 428 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.00055002 143.37 By MS/MS 4.5 0.5 1 1 2 1456300 1456300 0 12211 458 12972 30965;30966 24715 24715 1 109970 0 SGVISGGASDLK QRHKTVALDGTLFQKSGVISGGASDLKAKA FQKSGVISGGASDLKAKARRWDEKAVDKLK K S G L K A 1 0 0 1 0 0 0 3 0 1 1 1 0 0 0 3 0 0 0 1 0 0 12 0 1089.5666 Q14683 Q14683 649 660 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.001083 123.62 By MS/MS 3 0 1 1 1252300 1252300 0 12212 1451 12973 30967 24716 24716 1 22914 0 SGVISGGASDLKAK QRHKTVALDGTLFQKSGVISGGASDLKAKA KSGVISGGASDLKAKARRWDEKAVDKLKEK K S G A K A 2 0 0 1 0 0 0 3 0 1 1 2 0 0 0 3 0 0 0 1 0 0 14 1 1288.6987 Q14683 Q14683 649 662 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.0020931 126.66 By MS/MS 3 0 1 1 328850 328850 0 12213 1451 12974 30968 24717 24717 1 6017.1 0 SGVSLAALKK VSELITKAVAASKERSGVSLAALKKALAAA ASKERSGVSLAALKKALAAAGYDVEKNNSR R S G K K A 2 0 0 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 0 1 0 0 10 1 972.59678 P10412;P16402;P16403 P16403 55 64 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 2 0.0041986 115.7 By MS/MS 7.5 0.5 1 1 2 4459700 4459700 0 12214 560;633 12975 30969;30970 24718;24719 24718 2 64166 0 SGYFDER RTMKHTTDLDASKIRSGYFDERYVLSSRVR DLDASKIRSGYFDERYVLSSRVRTGRSIRG R S G E R Y 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 7 0 872.36645 P12532 P12532 151 157 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.014511 123.69 By MS/MS 7 0 1 1 1702800 1702800 0 12215 593 12976 30971 24720 24720 1 26730 0 SGYLLPDTK VLDLAVVLFETATLRSGYLLPDTKAYGDRI ETATLRSGYLLPDTKAYGDRIERMLRLSLN R S G T K A 0 0 0 1 0 0 0 1 0 0 2 1 0 0 1 1 1 0 1 0 0 0 9 0 992.51786 P14625 P14625 725 733 HSP90B1 Endoplasmin yes yes 2 0.030904 84.213 By MS/MS By matching 4 0 2 1 1 4496500 4435100 61439 12216 615 12977 30972;30973 24721 24721 1 417370 130910 SGYRSGGGFSSGSAGIINYQR ______________________________ GGFSSGSAGIINYQRRTTSSSTRRSGGGGG R S G Q R R 1 2 1 0 0 1 0 6 0 2 0 0 0 1 0 5 0 0 2 0 0 0 21 1 2120.0035 CON__P04264;P04264 P04264 9 29 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.00065772 96.153 By MS/MS 2 0 1 1 101460 0 101460 + 12217 471;45 12978 30974 24722 24722 1 0 143480 SGYSSDRDR ______________________________ ______________________________ M S G D R G 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 3 0 0 1 0 0 0 9 1 1041.4476 P17844 P17844 2 10 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.022183 87.696 By MS/MS 5 0 1 1 701570 701570 0 12218 646 12979 30975 24723 24723 1 7036.3 0 SHASASLYLLMR LRLLRHCSSSIGTIRSHASASLYLLMRQNF TIRSHASASLYLLMRQNFEIGNNFARVKMQ R S H M R Q 2 1 0 0 0 0 0 0 1 0 3 0 1 0 0 3 0 0 1 0 0 0 12 0 1347.6969 Q96N67 Q96N67 1570 1581 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.016373 86.882 By MS/MS 2 0 1 1 224760 224760 0 12219 2201 12980 30976 24724 24724 1032 1 76024 0 SHEANSNAVR EDGGLLNYLFTFLLKSHEANSNAVRFRVCL TFLLKSHEANSNAVRFRVCLLINKLLGSMP K S H V R F 2 1 2 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1083.5057 Q9BPX3 Q9BPX3 106 115 NCAPG Condensin complex subunit 3 yes yes 2 0.00029265 140.83 By MS/MS 3.5 0.5 1 1 2 523870 523870 0 12220 2279 12981 30977;30978 24725;24726 24725 2 31926 0 SHEGETAYIR DMTYAVRKLDNTKFRSHEGETAYIRVKVDG NTKFRSHEGETAYIRVKVDGPRSPSYGRSR R S H I R V 1 1 0 0 0 0 2 1 1 1 0 0 0 0 0 1 1 0 1 0 0 0 10 0 1161.5415 Q07955 Q07955 182 191 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 2 0.011531 90.906 By MS/MS 8.5 0.5 1 1 2 695700 695700 0 12221 1304 12982 30979;30980 24727 24727 1 9223.8 0 SHGIDLDHNR SGKKKTFKDVGNLLRSHGIDLDHNRFLILQ GNLLRSHGIDLDHNRFLILQGEVEQIAMMK R S H N R F 0 1 1 2 0 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1162.5479 Q9NTJ3 Q9NTJ3 215 224 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.0069305 109.83 By MS/MS 3 0 1 1 2062500 2062500 0 12222 2575 12983 30981 24728 24728 1 37738 0 SHGLFGLNENQLR LSHDIHTPVNMQVLKSHGLFGLNENQLRIL LKSHGLFGLNENQLRILLLQNDPCLLPEVC K S H L R I 0 1 2 0 0 1 1 2 1 0 3 0 0 1 0 1 0 0 0 0 0 0 13 0 1483.7532 Q96H79 Q96H79 142 154 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 2;3 0.036381 104.24 By MS/MS 7.5 0.5 2 2 4 3336100 3336100 0 12223 2163 12984 30982;30983;30984;30985 24729;24730 24729 2 46061 0 SHGVLGLYR PRYRGIGDCVRQTVRSHGVLGLYRGLSSLL VRQTVRSHGVLGLYRGLSSLLYGSIPKAAV R S H Y R G 0 1 0 0 0 0 0 2 1 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1000.5454 P53007 P53007 77 85 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0093421 101.6 By MS/MS 8.75 0.829 2 1 1 4 9798800 9798800 0 12224 1026 12985 30986;30987;30988;30989 24731;24732 24731 2 131480 0 SHIAEGPADLEDPFNPK LDESFLELVDYILEKSHIAEGPADLEDPFN IAEGPADLEDPFNPKAQLVLVGATFPEGVG K S H P K A 2 0 1 2 0 0 2 1 1 1 1 1 0 1 3 1 0 0 0 0 0 0 17 0 1835.869 Q9NUL7 Q9NUL7 307 323 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2;3 2.0409E-07 249.98 By MS/MS 6.33 0.471 2 1 3 5671600 5671600 0 12225 2582 12986 30990;30991;30992 24733;24734 24734 2 41301 0 SHIMAAK DQDRKSRLMGLEALKSHIMAAKAVANTMRT LMGLEALKSHIMAAKAVANTMRTSLGPNGL K S H A K A 2 0 0 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 0 7 0 756.39524 P48643 P48643 36 42 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.038348 97.473 By MS/MS 6 0 1 1 916740 916740 0 12226 940 12987 30993 24735 24735 497 1 6301.9 0 SHISDQSPLSSK CGREKSGIQPLCPERSHISDQSPLSSKRKA PERSHISDQSPLSSKRKALEESESSQLISP R S H S K R 0 0 0 1 0 1 0 0 1 1 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1284.631 P42166 P42166 345 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.00016613 152.69 By MS/MS 5 0 1 1 606130 606130 0 12227 875 12988 30994 24736 24736 1 6079.2 0 SHKDEVVK YKQKKAYQDRLAYLRSHKDEVVKIQSLARM DRLAYLRSHKDEVVKIQSLARMHQARKRYR R S H V K I 0 0 0 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 0 2 0 0 8 1 940.49779 P46940 P46940 804 811 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.035372 115.49 By MS/MS 2.5 0.5 1 1 2 154680 154680 0 12228 922 12989 30995;30996 24737 24737 1 38156 0 SHNDEHSDVLPVLDVCSLK SARGDFLNYALSLMRSHNDEHSDVLPVLDV EHSDVLPVLDVCSLKHVAYVFQALIYWIKA R S H L K H 0 0 1 3 1 0 1 0 2 0 3 1 0 0 1 3 0 0 0 3 0 0 19 0 2163.0266 O95071 O95071 1927 1945 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.037578 64.346 By MS/MS 2 0 1 1 99367 99367 0 12229 384 12990 30997 24738 24738 1 33610 0 SHPEVIGVFGESVK SSPSKIYGRALEKCRSHPEVIGVFGESVKG RSHPEVIGVFGESVKGYGEVTRRGRRQHVR R S H V K G 0 0 0 0 0 0 2 2 1 1 0 1 0 1 1 2 0 0 0 3 0 0 14 0 1483.7671 Q9BVV7 Q9BVV7 151 164 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.0013665 118.61 By MS/MS 9 0 1 1 989300 989300 0 12230 2341 12991 30998 24739 24739 1 19470 0 SHPFIKEYQAK EVTNRYLSQLKDAHRSHPFIKEYQAKENDF DAHRSHPFIKEYQAKENDFDRLVLQYAPSA R S H A K E 1 0 0 0 0 1 1 0 1 1 0 2 0 1 1 1 0 0 1 0 0 0 11 1 1346.6983 O14579 O14579 283 293 COPE Coatomer subunit epsilon yes yes 2;3 0.025837 103.31 By MS/MS 8.33 0.471 2 1 3 3151700 3151700 0 12231 127 12992 30999;31000;31001 24740;24741 24741 2 40878 0 SHPLDPIDTVDFER IHTEPQLSAALEYVRSHPLDPIDTVDFERE RSHPLDPIDTVDFERECGVGVIVTPEQIEE R S H E R E 0 1 0 3 0 0 1 0 1 1 1 0 0 1 2 1 1 0 0 1 0 0 14 0 1639.7842 P47897 P47897 96 109 QARS Glutamine--tRNA ligase yes yes 2;3 0.00045342 160.52 By MS/MS 4 0 2 2 3688800 3688800 0 12232 928 12993 31002;31003 24742;24743 24743 2 347140 0 SHPSPQAKPSNPSNPR ______________________________ HPSPQAKPSNPSNPRVFFDVDIGGERVGRI M S H P R V 1 1 2 0 0 1 0 0 1 0 0 1 0 0 5 4 0 0 0 0 0 0 16 1 1699.839 Q08752 Q08752 2 17 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 3 0.0011898 103.04 By MS/MS 7 0 1 1 2370500 2370500 0 12233 1312 12994 31004 24744 24744 1 37213 0 SHQFSSQSAFSSMSR ______________________________ SHQFSSQSAFSSMSRRVYSTSSSAGSGGGS M S H S R R 1 1 0 0 0 2 0 0 1 0 0 0 1 2 0 7 0 0 0 0 0 0 15 0 1672.7264 CON__Q7Z794;Q7Z794 CON__Q7Z794 2 16 KRT77 Keratin, type II cytoskeletal 1b yes no 2 6.6844E-06 157.5 By MS/MS 2 0 1 1 93628 0 93628 + 12234 72 12995 31005 24745 24745 50 1 0 132410 SHQGLDRQELSFAAR GLEERVAAAVDLIIKSHQGLDRQELSFAAR SHQGLDRQELSFAARSFYYKLRAAEQYTPK K S H A R S 2 2 0 1 0 2 1 1 1 0 2 0 0 1 0 2 0 0 0 0 0 0 15 1 1713.8547 P49327 P49327 2407 2421 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.0017691 115.37 By MS/MS 2.83 1.34 1 2 1 1 1 6 10076000 10076000 0 12235 946 12996 31006;31007;31008;31009;31010;31011 24746;24747 24747 2 2473700 0 SHSIFLINVK NRHVAVTNMNEHSSRSHSIFLINVKQENTQ EHSSRSHSIFLINVKQENTQTEQKLSGKLY R S H V K Q 0 0 1 0 0 0 0 0 1 2 1 1 0 1 0 2 0 0 0 1 0 0 10 0 1156.6604 P33176 P33176 204 213 KIF5B Kinesin-1 heavy chain yes yes 2 0.0014095 115.7 By MS/MS 4 0 1 1 1021100 1021100 0 12236 800 12997 31012 24748 24748 1 96093 0 SHTILLVQPTK ______________________________ ______________________________ M S H T K R 0 0 0 0 0 1 0 0 1 1 2 1 0 0 1 1 2 0 0 1 0 0 11 0 1235.7238 P84090 P84090 2 12 ERH Enhancer of rudimentary homolog yes yes 2 4.4265E-14 246.86 By MS/MS By MS/MS 10 0 2 1 1 13323000 12289000 1033700 12237 1245 12998 31013;31014 24749;24750 24750 2 662350 1323400 SHTILLVQPTKRPEGR ______________________________ HTILLVQPTKRPEGRTYADYESVNECMEGV M S H G R T 0 2 0 0 0 1 1 1 1 1 2 1 0 0 2 1 2 0 0 1 0 0 16 2 1831.0428 P84090 P84090 2 17 ERH Enhancer of rudimentary homolog yes yes 3;4 0.0020976 96.734 By MS/MS By MS/MS 10 0 3 2 1 9341300 9183600 157650 12238 1245 12999 31015;31016;31017 24751;24752;24753;24754 24753 4 494960 201840 SHVDLFPK YQEKWDKLLLTSTEKSHVDLFPKDSIIYLT LLTSTEKSHVDLFPKDSIIYLTADSPNVMT K S H P K D 0 0 0 1 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 1 0 0 8 0 941.49707 Q7L0Y3 Q7L0Y3 277 284 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.038568 86.833 By MS/MS 7 0 1 1 1708900 1708900 0 12239 1759 13000 31018 24755 24755 1 26827 0 SHVEQLVQNQFI KMEYQVCAADMNVLKSHVEQLVQNQFI___ VLKSHVEQLVQNQFI_______________ K S H F I - 0 0 1 0 0 3 1 0 1 1 1 0 0 1 0 1 0 0 0 2 0 0 12 0 1440.7361 Q8IYQ7 Q8IYQ7 732 743 THNSL1 Threonine synthase-like 1 yes yes 2 0.00061934 132.25 By MS/MS 5 0 1 1 819860 819860 0 12240 1888 13001 31019 24756 24756 1 8222.8 0 SHVLQQTQR EMMKAAYRKELEKNRSHVLQQTQRLDTSQK ELEKNRSHVLQQTQRLDTSQKRILELESHL R S H Q R L 0 1 0 0 0 3 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1095.5785 Q92574 Q92574 893 901 TSC1 Hamartin yes yes 2 0.0033587 112.11 By MS/MS 3 0 1 1 169020 169020 0 12241 2057 13002 31020 24757 24757 1 3092.5 0 SHVVREDLNPR SDPYVKLKLAGRSFRSHVVREDLNPRWNEV RSFRSHVVREDLNPRWNEVFEVIVTSVPGQ R S H P R W 0 2 1 1 0 0 1 0 1 0 1 0 0 0 1 1 0 0 0 2 0 0 11 1 1320.6898 Q9BSJ8 Q9BSJ8 689 699 ESYT1 Extended synaptotagmin-1 yes yes 3 0.03367 97.472 By MS/MS 4 0.816 1 1 1 3 3994500 3994500 0 12242 2308 13003 31021;31022;31023 24758 24758 1 137610 0 SIAAATSALVK DESLNFEEQILEAAKSIAAATSALVKAASA EAAKSIAAATSALVKAASAAQRELVAQGKV K S I V K A 4 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1030.6023 Q9Y490;Q9Y4G6 Q9Y490 2351 2361 TLN1;TLN2 Talin-1;Talin-2 no no 2 2.3259E-05 160.82 By MS/MS 3 0.816 1 1 1 3 2336900 2336900 0 12243 2888;2895 13004 31024;31025;31026 24759 24759 1 627200 0 SIAEGIGPEER VSSLLQRAHEQRFLKSIAEGIGPEERRQTL RFLKSIAEGIGPEERRQTLLQKMSSF____ K S I E R R 1 1 0 0 0 0 3 2 0 2 0 0 0 0 1 1 0 0 0 0 0 0 11 0 1156.5724 P57678 P57678 1037 1047 GEMIN4 Gem-associated protein 4 yes yes 2 0.001229 117.02 By MS/MS 4 0 1 1 1156500 1156500 0 12244 1079 13005 31027 24760 24760 1 108840 0 SIAELVPK IDNVILLITGTLHQRSIAELVPKCHPLGSF TGTLHQRSIAELVPKCHPLGSFEQMEAVNI R S I P K C 1 0 0 0 0 0 1 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 8 0 855.50657 P61421 P61421 121 128 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 2 0.032104 89.296 By MS/MS 7 0 1 1 788560 788560 0 12245 1123 13006 31028 24761 24761 1 12379 0 SIAKEGFEK EEAGDGTTTATVLARSIAKEGFEKISKGAN ATVLARSIAKEGFEKISKGANPVEIRRGVM R S I E K I 1 0 0 0 0 0 2 1 0 1 0 2 0 1 0 1 0 0 0 0 0 0 9 1 1007.5288 P10809 P10809 122 130 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.6302E-06 187.5 By MS/MS By matching 7 1.73 2 2 1 1 1 1 7 1 82592000 82537000 54954 12246 569 13007 31029;31030;31031;31032;31033;31034;31035;31036 24762;24763;24764;24765 24763 4 607070 46149 SIAKEGFEKISK EEAGDGTTTATVLARSIAKEGFEKISKGAN LARSIAKEGFEKISKGANPVEIRRGVMLAV R S I S K G 1 0 0 0 0 0 2 1 0 2 0 3 0 1 0 2 0 0 0 0 0 0 12 2 1335.7398 P10809 P10809 122 133 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.032611 91.202 By MS/MS 6 0 1 1 1066900 1066900 0 12247 569 13008 31037 24766 24766 1 7334 0 SIALTQAR DVRLLQEIVDQCMNRSIALTQARYLEKEEK VDQCMNRSIALTQARYLEKEEKCLPPPSIR R S I A R Y 2 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 0 858.49232 O15269 O15269 423 430 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.013368 107.01 By MS/MS 5.5 1.12 1 1 1 1 4 10522000 10522000 0 12248 177 13009 31038;31039;31040;31041 24767 24767 1 96370 0 SIATLAITTLLK ACNLDLENLVTDSNRSIATLAITTLLKTGS SNRSIATLAITTLLKTGSESSIDRLMKQIS R S I L K T 2 0 0 0 0 0 0 0 0 2 3 1 0 0 0 1 3 0 0 0 0 0 12 0 1243.7751 Q9Y678;Q9UBF2 Q9Y678 339 350 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 5.0162E-07 201.84 By MS/MS 4 0 1 1 128320 128320 0 12249 2933;2697 13010 31042 24768 24768 1 12076 0 SIDGMQYPIVIK FEVKGIEMAKESPSRSIDGMQYPIVIKNTK PSRSIDGMQYPIVIKNTKGEEIRCQYVVTC R S I I K N 0 0 0 1 0 1 0 1 0 3 0 1 1 0 1 1 0 0 1 1 0 0 12 0 1362.7217 Q9H9P8 Q9H9P8 232 243 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 4.6154E-06 188.91 By MS/MS 7.5 0.5 1 1 2 335740 335740 0 12250 2488 13011 31043;31044 24769 24769 1 5086.8 0 SIDGSIVLPLAR ILQPPSEKGRQCEWRSIDGSIVLPLARGSP EWRSIDGSIVLPLARGSPKALALEYALCLT R S I A R G 1 1 0 1 0 0 0 1 0 2 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1239.7187 Q9HD20 Q9HD20 786 797 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.00037989 161.63 By MS/MS 2.6 1.02 1 1 2 1 5 753240 753240 0 12251 2517 13012 31045;31046;31047;31048;31049 24770;24771;24772;24773 24773 4 134670 0 SIDLKDKYK WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL GVTVAKSIDLKDKYKNIGAKLVQDVANNTN K S I Y K N 0 0 0 2 0 0 0 0 0 1 1 3 0 0 0 1 0 0 1 0 0 0 9 2 1108.6128 P10809 P10809 83 91 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.00065726 148.99 By MS/MS By matching 7.82 1.47 3 2 2 2 2 10 1 32833000 32765000 68085 12252 569 13013 31050;31051;31052;31053;31054;31055;31056;31057;31058;31059;31060 24774;24775;24776;24777;24778;24779 24775 6 276460 69768 SIDLQEPLQK YGDGNAVPRILKFLKSIDLQEPLQKKFCFP LKFLKSIDLQEPLQKKFCFPPVKENISQDI K S I Q K K 0 0 0 1 0 2 1 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1169.6292 Q9Y223 Q9Y223 376 385 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0013261 117.31 By MS/MS 5 0 1 1 816570 816570 0 12253 2808 13014 31061 24780 24780 1 8189.8 0 SIDSNPYDTDK CIGTMTIEIDFLQKKSIDSNPYDTDKMAAE LQKKSIDSNPYDTDKMAAEFIQQFNNQAFS K S I D K M 0 0 1 3 0 0 0 0 0 1 0 1 0 0 1 2 1 0 1 0 0 0 11 0 1253.5412 P46459 P46459 106 116 NSF Vesicle-fusing ATPase yes yes 2 0.050598 69.65 By MS/MS 5 0 1 1 832190 832190 0 12254 912 13015 31062 24781 24781 1 8346.4 0 SIEALLEAGQAR QEARAENSQLTERIRSIEALLEAGQARDAQ RIRSIEALLEAGQARDAQDVQASQAEADQQ R S I A R D 3 1 0 0 0 1 2 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1256.6725 Q9P2E9 Q9P2E9 959 970 RRBP1 Ribosome-binding protein 1 yes yes 2 0.00030243 158.79 By MS/MS 2 0 1 1 0 0 0 12255 2682 13016 31063 24782 24782 1 0 0 SIEEQLGTEIKPIPSNIDK LAINLITYDDRFNLKSIEEQLGTEIKPIPS QLGTEIKPIPSNIDKSLYVAEYHSEPVEDE K S I D K S 0 0 1 1 0 1 3 1 0 4 1 2 0 0 2 2 1 0 0 0 0 0 19 1 2110.1158 P26196 P26196 448 466 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 3 0.0012762 101.08 By MS/MS 6 0 1 1 3384700 3384700 0 12256 729 13017 31064 24783 24783 1 23267 0 SIEEVLR LSVRLAQLLSRPGWRSIEEVLRILPGPHFE LLSRPGWRSIEEVLRILPGPHFEERQPLPT R S I L R I 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 7 0 844.46543 Q96AX1 Q96AX1 510 516 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2 0.037102 99.375 By MS/MS 5 0 1 1 1216500 1216500 0 12257 2109 13018 31065 24784 24784 1 12201 0 SIELFYK LLAHCGRPQTECRHKSIELFYKFVPLLPGN PQTECRHKSIELFYKFVPLLPGNRSPNLWL K S I Y K F 0 0 0 0 0 0 1 0 0 1 1 1 0 1 0 1 0 0 1 0 0 0 7 0 898.48002 P78527 P78527 1187 1193 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.03068 97.602 By MS/MS 2.5 0.5 1 1 2 1758800 1758800 0 12258 1225 13019 31066;31067 24785 24785 1 484000 0 SIEPLTYGR ELELSYCIEIGEDNRSIEPLTYGRIASYYY IGEDNRSIEPLTYGRIASYYYLKHQTVKMF R S I G R I 0 1 0 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 0 0 0 9 0 1034.5397 Q8N3C0 Q8N3C0 1809 1817 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.017798 82.426 By MS/MS 1.5 0.5 1 1 2 485690 485690 0 12259 1911 13020 31068;31069 24786 24786 1 136690 0 SIEPYLK KDLVPDLSNFYAQYKSIEPYLKKKDESQEG SNFYAQYKSIEPYLKKKDESQEGKQQYLQS K S I L K K 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 7 0 848.46437 P21912 P21912 152 158 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.03963 97.473 By MS/MS 8 0 1 1 1923800 1923800 0 12260 683 13021 31070 24787 24787 1 24287 0 SIEQDAVNTFTK SPASPLKELSGKLMKSIEQDAVNTFTKYIS LMKSIEQDAVNTFTKYISPDAAKPIPITEA K S I T K Y 1 0 1 1 0 1 1 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 12 0 1351.662 O43572 O43572 293 304 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 2 7.2291E-05 158.34 By MS/MS 5 0 1 1 966970 966970 0 12261 218 13022 31071 24788 24788 1 9698.2 0 SIEVQLLR LLPNMLSPDPRELQKSIEVQLLRSSVCLAT DPRELQKSIEVQLLRSSVCLATALNPIEQD K S I L R S 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 0 956.56548 Q96Q15 Q96Q15 1288 1295 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.021509 107.9 By MS/MS 2 0.816 1 1 1 3 206030 206030 0 12262 2213 13023 31072;31073;31074 24789;24790 24789 2 51474 0 SIEVYSAYNNVK VLLAQCVVYFARAPKSIEVYSAYNNVKACL APKSIEVYSAYNNVKACLRNHQGPLPPVPL K S I V K A 1 0 2 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 2 2 0 0 12 0 1385.6827 Q96S55 Q96S55 590 601 WRNIP1 ATPase WRNIP1 yes yes 2 0.00037378 139.15 By MS/MS 4.5 0.5 1 1 2 1206000 1206000 0 12263 2231 13024 31075;31076 24791 24791 1 37641 0 SIFAQEIAAR RSRDTQGKSATSGKRSIFAQEIAARRIAEA TSGKRSIFAQEIAARRIAEAKGPSVGEVVP R S I A R R 3 1 0 0 0 1 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 10 0 1104.5928 Q9BWH6 Q9BWH6 150 159 RPAP1 RNA polymerase II-associated protein 1 yes yes 2 4.0222E-05 157.99 By MS/MS 3 0 1 1 401820 401820 0 12264 2349 13025 31077 24792 24792 1 7352.2 0 SIFLFLDR DRCWQNHCRQMIMIRSIFLFLDRTYVLQNS RQMIMIRSIFLFLDRTYVLQNSMLPSIWDM R S I D R T 0 1 0 1 0 0 0 0 0 1 2 0 0 2 0 1 0 0 0 0 0 0 8 0 1009.5597 Q13620;Q13619 Q13620 305 312 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.011474 109.11 By MS/MS 4.5 0.5 1 1 2 151440 151440 0 12265 1405 13026 31078;31079 24793;24794 24794 2 8575.1 0 SIFLVAHR VMMGILTIYTSYKEKSIFLVAHRKDPTGMD YTSYKEKSIFLVAHRKDPTGMDPDDIWQLS K S I H R K 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 0 8 0 941.54469 Q15005 Q15005 138 145 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.033032 88.942 By MS/MS 9 0 1 1 1852800 1852800 0 12266 1469 13027 31080 24795 24795 1 36464 0 SIFTPTNQIR ______________________________ ______________________________ M S I I R L 0 1 1 0 0 1 0 0 0 2 0 0 0 1 1 1 2 0 0 0 0 0 10 0 1175.6299 Q9Y3A5 Q9Y3A5 2 11 SBDS Ribosome maturation protein SBDS yes yes 2 0.00047607 134.77 By MS/MS 8 0 1 1 3630000 3630000 0 12267 2862 13028 31081 24796 24796 1 45829 0 SIGEYDVLR PPDVLRWVELAKLYRSIGEYDVLRGIFTSE LAKLYRSIGEYDVLRGIFTSEIGTKQITQS R S I L R G 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1050.5346 P78527 P78527 2932 2940 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0012196 131.22 By MS/MS By matching 2.6 1.02 1 1 2 1 4 1 10674000 10570000 103700 12268 1225 13029 31082;31083;31084;31085;31086 24797;24798;24799 24797 3 2253500 13200 SIGSAVDQGNESIVAK RQFVDGPPGPVKKTRSIGSAVDQGNESIVA IGSAVDQGNESIVAKTTVTVPNDGGPIEAV R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 0 16 0 1573.7948 Q9H0H5 Q9H0H5 203 218 RACGAP1 Rac GTPase-activating protein 1 yes yes 2 1.3911E-05 201.09 By MS/MS 5 0 1 1 1241600 1241600 0 12269 2410 13030 31087 24800 24800 1 12452 0 SIGTGGIQDLK MILQRYYDSKNHQKRSIGTGGIQDLKERIR HQKRSIGTGGIQDLKERIRQRTNLPLGPSI R S I L K E 0 0 0 1 0 1 0 3 0 2 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1087.5873 O00471 O00471 378 388 EXOC5 Exocyst complex component 5 yes yes 2 0.0011783 118.03 By MS/MS By matching 2.25 1.64 2 1 1 3 1 10101000 4333300 5768100 12270 108 13031 31088;31089;31090;31091 24801;24802 24802 2 883060 5768100 SIIFANYIAR VLLMGKSGSGKTSMRSIIFANYIARDTRRL KTSMRSIIFANYIARDTRRLGATIDVEHSH R S I A R D 2 1 1 0 0 0 0 0 0 3 0 0 0 1 0 1 0 0 1 0 0 0 10 0 1166.6448 Q7L523;Q5VZM2 Q7L523 25 34 RRAGA;RRAGB Ras-related GTP-binding protein A;Ras-related GTP-binding protein B yes no 2 0.00042349 134.77 By MS/MS 8 0 1 1 217740 217740 0 12271 1659 13032 31092 24803 24803 1 2749 0 SIIKEPESAAEAVK CHHFFVVLSEADSKKSIIKEPESAAEAVKL KSIIKEPESAAEAVKLAFQQKPPPPPKKIY K S I V K L 3 0 0 0 0 0 3 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 14 1 1470.793 O76031 O76031 145 158 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 0.0042519 127.71 By MS/MS 5.5 0.5 2 2 4 10271000 10271000 0 12272 360 13033 31093;31094;31095;31096 24804;24805;24806 24805 3 96870 0 SIILEGFK ______________________________ ______________________________ K S I F K S 0 0 0 0 0 0 1 1 0 2 1 1 0 1 0 1 0 0 0 0 0 0 8 0 905.52222 O95347 O95347 5 12 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.016227 103.83 By MS/MS 2.5 0.5 1 1 2 1078300 1078300 0 12273 405 13034 31097;31098 24807 24807 1 29005 0 SIIQSAQQDSIK EFAIMQTPAGELYDKSIIQSAQQDSIKKAN YDKSIIQSAQQDSIKKANMKRENKAYSFKE K S I I K K 1 0 0 1 0 3 0 0 0 3 0 1 0 0 0 3 0 0 0 0 0 0 12 0 1316.6936 Q92616 Q92616 777 788 GCN1L1 Translational activator GCN1 yes yes 2 1.9489E-08 205.07 By MS/MS 2.5 0.5 1 1 2 2712200 2712200 0 12274 2064 13035 31099;31100 24808;24809 24808 2 770150 0 SIIQSAQQDSIKK EFAIMQTPAGELYDKSIIQSAQQDSIKKAN DKSIIQSAQQDSIKKANMKRENKAYSFKEQ K S I K K A 1 0 0 1 0 3 0 0 0 3 0 2 0 0 0 3 0 0 0 0 0 0 13 1 1444.7886 Q92616 Q92616 777 789 GCN1L1 Translational activator GCN1 yes yes 2 9.8572E-05 182.92 By MS/MS 2.5 0.5 1 1 2 656600 656600 0 12275 2064 13036 31101;31102 24810 24810 1 162490 0 SIKENASAGVER ITDEKSFENIQNWMKSIKENASAGVERLLL WMKSIKENASAGVERLLLGNKCDMEAKRKV K S I E R L 2 1 1 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 12 1 1259.647 P51153 P51153 105 116 RAB13 Ras-related protein Rab-13 yes yes 2 0.00026821 166.11 By MS/MS 9.5 0.5 1 1 2 943250 943250 0 12276 992 13037 31103;31104 24811 24811 1 19937 0 SIKHEVER ADVLVDGYNVHYGARSIKHEVERRVVNQLA NVHYGARSIKHEVERRVVNQLAAAYEQDLL R S I E R R 0 1 0 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 8 1 996.53524 Q9H078 Q9H078 621 628 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.023067 102.07 By MS/MS 6 0 1 1 2110500 2110500 0 12277 2402 13038 31105 24812 24812 1 14508 0 SIKHEVERR ADVLVDGYNVHYGARSIKHEVERRVVNQLA VHYGARSIKHEVERRVVNQLAAAYEQDLLP R S I R R V 0 2 0 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 9 2 1152.6364 Q9H078 Q9H078 621 629 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.0041618 109.44 By MS/MS 6 0 1 1 5054900 5054900 0 12278 2402 13039 31106 24813 24813 1 34748 0 SILDWTSFNQER WRNFADIDDSWKSIKSILDWTSFNQERIVD SIKSILDWTSFNQERIVDVAGPGGWNDPDM K S I E R I 0 1 1 1 0 1 1 0 0 1 1 0 0 1 0 2 1 1 0 0 0 0 12 0 1494.7103 P06280 P06280 241 252 GLA Alpha-galactosidase A yes yes 2 0.0011453 117.14 By MS/MS 6.5 0.5 1 1 2 423010 423010 0 12279 495 13040 31107;31108 24814 24814 1 3499.2 0 SILEQLAEK WHFEEAVDGECPPQRSILEQLAEKNFELVI ECPPQRSILEQLAEKNFELVINLSMRGAGG R S I E K N 1 0 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1029.5706 P27708 P27708 1379 1387 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0025078 114.86 By MS/MS 2 0 1 1 405070 405070 0 12280 745 13041 31109 24815 24815 1 137010 0 SILFVPTSAPR MAYIHFTAEGEVTFKSILFVPTSAPRGLFD VTFKSILFVPTSAPRGLFDEYGSKKSDYIK K S I P R G 1 1 0 0 0 0 0 0 0 1 1 0 0 1 2 2 1 0 0 1 0 0 11 0 1186.671 P14625 P14625 385 395 HSP90B1 Endoplasmin yes yes 2 0.0013375 114.86 By MS/MS 5 0.816 1 1 1 3 12385000 12385000 0 12281 615 13042 31110;31111;31112 24816;24817;24818 24816 3 923970 0 SILKIDDVVNTR LVSVSALTLATETVRSILKIDDVVNTR___ TVRSILKIDDVVNTR_______________ R S I T R - 0 1 1 2 0 0 0 0 0 2 1 1 0 0 0 1 1 0 0 2 0 0 12 1 1371.7722 P50991 P50991 528 539 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.00031019 177.04 By MS/MS 7 1.22 1 2 2 2 1 8 128240000 128240000 0 12282 985 13043 31113;31114;31115;31116;31117;31118;31119;31120 24819;24820;24821;24822;24823;24824;24825 24822 7 1009600 0 SILLNCATPDAVVR ALTEELHQKVSEEAKSILLNCATPDAVVRL KSILLNCATPDAVVRLSAYSLGGFAAEWLS K S I V R L 2 1 1 1 1 0 0 0 0 1 2 0 0 0 1 1 1 0 0 2 0 0 14 0 1527.8079 Q63HN8 Q63HN8 3256 3269 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.00046314 150.51 By MS/MS 1.5 0.5 1 1 2 449240 449240 0 12283 1664 13044 31121;31122 24826 24826 1 125770 0 SILSPGGSCGPIK KKHVGGRVMVTDADRSILSPGGSCGPIKVK DRSILSPGGSCGPIKVKTEPTEDSGISLEM R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0075387 87.568 By MS/MS 3.5 0.5 1 1 2 1913200 1913200 0 12284 1221 13045 31123;31124 24827 24827 1 59343 0 SINDPEHPLTLEELNVVEQVR VPDSIDAREIFDLIRSINDPEHPLTLEELN HPLTLEELNVVEQVRVQVSDPESTVAVAFT R S I V R V 0 1 2 1 0 1 4 0 1 1 3 0 0 0 2 1 1 0 0 3 0 0 21 0 2430.2391 Q9Y3D0 Q9Y3D0 52 72 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 3 6.4285E-06 132.79 By MS/MS 9.5 0.5 1 1 2 270200 270200 0 12285 2870 13046 31125;31126 24828 24828 1 12162 0 SINNAEKR ______________________________ VLADALKSINNAEKRGKRQVLIRPCSKVIV K S I K R G 1 1 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 8 1 930.48829 P62244 P62244 13 20 RPS15A 40S ribosomal protein S15a yes yes 2 0.018795 123.21 By MS/MS 10 0 1 1 13241000 13241000 0 12286 1144 13047 31127 24829 24829 1 713640 0 SINNYNPK GSTPSEPHPVLEKLRSINNYNPKDFDWNLK PVLEKLRSINNYNPKDFDWNLKHGRVFIIK R S I P K D 0 0 3 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 8 0 948.46649 Q9Y5A9 Q9Y5A9 394 401 YTHDF2 YTH domain-containing family protein 2 yes yes 2 0.053375 81.191 By MS/MS 5.5 0.5 1 1 2 4217800 4217800 0 12287 2908 13048 31128;31129 24830 24830 1 33118 0 SINQPVAFVR ______________________________ AALRRSINQPVAFVRRIPWTAASSQLKEHF R S I V R R 1 1 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 10 0 1129.6244 Q9GZT3 Q9GZT3 15 24 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 5.648E-06 177.3 By MS/MS By MS/MS 10 0 3 2 1 29929000 29497000 432080 12288 2398 13049 31130;31131;31132 24831;24832 24832 2 1589800 553190 SINQPVAFVRR ______________________________ ALRRSINQPVAFVRRIPWTAASSQLKEHFA R S I R R I 1 2 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 11 1 1285.7255 Q9GZT3 Q9GZT3 15 25 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.0044317 88.177 By MS/MS 10 0 1 1 1007800 1007800 0 12289 2398 13050 31133 24833 24833 1 54318 0 SIPLAMAPVFEQK HQYTLEPSEKPFDMKSIPLAMAPVFEQKAE MKSIPLAMAPVFEQKAEITLVATKPEKLAP K S I Q K A 2 0 0 0 0 1 1 0 0 1 1 1 1 1 2 1 0 0 0 1 0 0 13 0 1429.7639 Q9UBF2 Q9UBF2 578 590 COPG2 Coatomer subunit gamma-2 yes yes 2 3.798E-05 180.19 By MS/MS 4.5 0.5 2 2 4 3197500 3197500 0 12290 2697 13051;13052 31134;31135;31136;31137 24834;24835;24836 24835 1144 3 245750 0 SIPLDEGEDEAQR LSTDMIFNNFLARLRSIPLDEGEDEAQRRR LRSIPLDEGEDEAQRRRKGKEDEGEEAASP R S I Q R R 1 1 0 2 0 1 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 13 0 1457.6634 Q14204 Q14204 2384 2396 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0010497 125.23 By MS/MS 1.5 0.5 1 1 2 1989600 1989600 0 12291 1433 13053 31138;31139 24837;24838 24838 2 556820 0 SIPLDEGEDEAQRR LSTDMIFNNFLARLRSIPLDEGEDEAQRRR RSIPLDEGEDEAQRRRKGKEDEGEEAASPM R S I R R R 1 2 0 2 0 1 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 14 1 1613.7645 Q14204 Q14204 2384 2397 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0055053 93.667 By MS/MS 1.5 0.5 1 1 2 793880 793880 0 12292 1433 13054 31140;31141 24839 24839 1 212850 0 SIPLECPLSSPK DSTKLELALTGGEAKSIPLECPLSSPKGVL EAKSIPLECPLSSPKGVLFSSKSAEVCKQD K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.011236 89.9 By MS/MS 3 0 1 1 840580 840580 0 12293 2068 13055 31142 24840 24840 1 15380 0 SIQADGLVWGSSK WDDETDMAKLEECVRSIQADGLVWGSSKLV VRSIQADGLVWGSSKLVPVGYGIKKLQIQC R S I S K L 1 0 0 1 0 1 0 2 0 1 1 1 0 0 0 3 0 1 0 1 0 0 13 0 1346.683 P24534 P24534 164 176 EEF1B2 Elongation factor 1-beta yes yes 2 4.1217E-07 182.23 By MS/MS 8 0 1 1 0 0 0 12294 713 13056 31143 24841 24841 1 0 0 SIQDAELLVK TVYLNKLKTVDVIVRSIQDAELLVKGYEIK DVIVRSIQDAELLVKGYEIKLSQEEVVLAD R S I V K G 1 0 0 1 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1114.6234 Q9UPN3 Q9UPN3 1165 1174 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 2 0.016522 88.496 By MS/MS 1 0 1 1 70281 70281 0 12295 2798 13057 31144 24842 24842 1 16935 0 SIQDLTVTGTEPGQVSSR VPEIVISGNGQPRRRSIQDLTVTGTEPGQV DLTVTGTEPGQVSSRSSSPSVRMITTSGPT R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 O43318 O43318 439 456 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 2 1.9775E-44 320.35 By MS/MS By matching 5 0 2 1 1 2345300 2282100 63245 12296 203 13058 31145;31146 24843 24843 1 22888 53112 SIQFVDWCPTGFK PKDVNAAIATIKTKRSIQFVDWCPTGFKVG KRSIQFVDWCPTGFKVGINYQPPTVVPGGD R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 2 4.6642E-08 219.92 By MS/MS 6.86 1.12 4 1 1 1 7 2837200 2837200 0 12297 1210;1211 13059 31147;31148;31149;31150;31151;31152;31153 24844;24845;24846;24847;24848;24849;24850;24851;24852 24845 9 23948 0 SIQLDGLVWGASK WDDETDMAQLEACVRSIQLDGLVWGASKLV VRSIQLDGLVWGASKLVPVGYGIRKLQIQC R S I S K L 1 0 0 1 0 1 0 2 0 1 2 1 0 0 0 2 0 1 0 1 0 0 13 0 1372.7351 P29692 P29692 220 232 EEF1D Elongation factor 1-delta yes yes 2 0.00011798 171.62 By MS/MS 7 0 1 1 311350 311350 0 12298 760 13060 31154 24853;24854 24854 2 4887.6 0 SIQMLTLLR DIKESIETMRTRLERSIQMLTLLRAFEARD RTRLERSIQMLTLLRAFEARDRNLQEGNLE R S I L R A 0 1 0 0 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 9 0 1073.6267 Q13445 Q13445 168 176 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 2 0.011506 108.43 By MS/MS 8 0 1 1 0 0 0 12299 1387 13061 31155 24855 24855 1 0 0 SIRPDNMSEYSK EMTKYHSDEYIKFLRSIRPDNMSEYSKQMQ FLRSIRPDNMSEYSKQMQRFNVGEDCPVFD R S I S K Q 0 1 1 1 0 0 1 0 0 1 0 1 1 0 1 3 0 0 1 0 0 0 12 1 1425.6558 Q92769;Q13547 Q92769 79 90 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 yes no 2 0.012399 110.84 By MS/MS 6 0 1 1 589980 589980 0 12300 2069 13062 31156 24856 24856 1 4055.6 0 SISCEVLGSVLR ENHDSVYYTYEDYAKSISCEVLGSVLRTHH YAKSISCEVLGSVLRTHHTNTLSNINSIKH K S I L R T 0 1 0 0 1 0 1 1 0 1 2 0 0 0 0 3 0 0 0 2 0 0 12 0 1318.6915 Q9UKA4 Q9UKA4 494 505 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0055852 125.74 By MS/MS 2 0 1 1 0 0 0 12301 2758 13063 31157 24857 24857 1 0 0 SISGTPAETPACK LLLHVTIAAQSGLTRSISGTPAETPACKSA TRSISGTPAETPACKSASETKVISHAVRQP R S I C K S 2 0 0 0 1 0 1 1 0 1 0 1 0 0 2 2 2 0 0 0 0 0 13 0 1317.6235 Q9Y4D8 Q9Y4D8 1073 1085 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes yes 2 0.0014906 128.51 By MS/MS 1.5 0.5 1 1 2 189690 189690 0 12302 2892 13064 31158;31159 24858;24859 24859 2 56894 0 SISINLMGR RGFGSRSLYNLGGSRSISINLMGRSTSGFC NLGGSRSISINLMGRSTSGFCQGGGVGGFG R S I G R S 0 1 1 0 0 0 0 1 0 2 1 0 1 0 0 2 0 0 0 0 0 0 9 0 989.5328 CON__Q7Z794;Q7Z794 CON__Q7Z794 69 77 KRT77 Keratin, type II cytoskeletal 1b yes no 2 0.00086478 137.9 By MS/MS 2 0 1 1 247570 0 247570 + 12303 72 13065 31160 24860 24860 51 1 0 350110 SISISVAR GGFGSRSLVNLGGSKSISISVARGGGRGSG VNLGGSKSISISVARGGGRGSGFGGGYGGG K S I A R G 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 1 0 0 8 0 831.48142 CON__P04264;P04264 P04264 75 82 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.0021369 143.89 By MS/MS By MS/MS 4.76 3.02 3 2 2 2 2 1 1 1 1 2 6 11 264280000 63849000 200430000 + 12304 471;45 13066 31161;31162;31163;31164;31165;31166;31167;31168;31169;31170;31171;31172;31173;31174;31175;31176;31177 24861;24862;24863;24864;24865;24866;24867 24861 7 6252800 152300000 SISLPSLDLVSAK IMDFKKFSRSYQFSKSISLPSLDLVSAKIE SKSISLPSLDLVSAKIEGNLIFDPNNYLPK K S I A K I 1 0 0 1 0 0 0 0 0 1 3 1 0 0 1 4 0 0 0 1 0 0 13 0 1328.7551 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 639 651 yes yes 2 0.0043124 94.692 By MS/MS 5 0 1 1 385560 385560 0 + 12305 33 13067 31178 24868 24868 1 3867 0 SISLYYTGEK EKTFEEKQGTEIDGRSISLYYTGEKGQNQD EIDGRSISLYYTGEKGQNQDYRGGKNSTWS R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338 P19338 458 467 NCL Nucleolin yes yes 2 0.0066392 101.9 By MS/MS 4.5 0.5 1 1 2 2300000 2300000 0 12306 659 13068 31179;31180 24869 24869 1 178020 0 SISNPPGSNLR GTASLQNFNISNLQKSISNPPGSNLRTT__ NLQKSISNPPGSNLRTT_____________ K S I L R T 0 1 2 0 0 0 0 1 0 1 1 0 0 0 2 3 0 0 0 0 0 0 11 0 1140.5887 Q9H4A3 Q9H4A3 2370 2380 WNK1 Serine/threonine-protein kinase WNK1 yes yes 2 0.016835 87.298 By MS/MS 1 0 1 1 89985 89985 0 12307 2443 13069 31181 24870;24871 24870 2 21683 0 SISVIDSPGILSGEK LNRFMCSQLPNQVLKSISVIDSPGILSGEK SISVIDSPGILSGEKQRISRGYDFCQVLQW K S I E K Q 0 0 0 1 0 0 1 2 0 3 1 1 0 0 1 4 0 0 0 1 0 0 15 0 1500.8035 Q9H223 Q9H223 151 165 EHD4 EH domain-containing protein 4 yes yes 2 0.00044125 166.11 By MS/MS 5 0 1 1 1179200 1179200 0 12308 2425 13070 31182 24872 24872 1 11827 0 SITCLDISSR KFLAPYTTFSRIHTKSITCLDISSRGGLGV RIHTKSITCLDISSRGGLGVSSSTDGTMKI K S I S R G 0 1 0 1 1 0 0 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 10 0 1150.5652 Q9BRP4 Q9BRP4 94 103 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 2 0.013806 107.21 By MS/MS 7 0 1 1 242820 242820 0 12309 2297 13071 31183 24873 24873 0 3811.9 0 SITCWTLSR PHLIQCLSDKKALVRSITCWTLSRYAHWVV KKALVRSITCWTLSRYAHWVVSQPPDTYLK R S I S R Y 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 2 2 1 0 0 0 0 9 0 1122.5492 Q92973 Q92973 464 472 TNPO1 Transportin-1 yes yes 2 0.00040668 149.57 By MS/MS 4 0 1 1 855110 855110 0 12310 2082 13072 31184 24874 24874 1 80472 0 SITNTTVCTK DDNRILRPWQSSETRSITNTTVCTKCGGAG SSETRSITNTTVCTKCGGAGHIASDCKFQR R S I T K C 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 4 0 0 1 0 0 10 0 1123.5543 Q15637 Q15637 272 281 SF1 Splicing factor 1 yes yes 2 0.0014473 114.97 By MS/MS 5 0 1 1 472710 472710 0 12311 1521 13073 31185 24875 24875 1 4741 0 SITQIKYNR ______________________________ LQGHERSITQIKYNREGDLLFTVAKDPIVN R S I N R E 0 1 1 0 0 1 0 0 0 2 0 1 0 0 0 1 1 0 1 0 0 0 9 1 1121.6193 Q13347 Q13347 12 20 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.00085393 156.75 By MS/MS 8.33 1.25 1 1 1 3 3062300 3062300 0 12312 1372 13074 31186;31187;31188 24876;24877;24878 24877 3 53880 0 SITVLVEGENTR MQEHSDQVPVGNIPRSITVLVEGENTRIAQ IPRSITVLVEGENTRIAQPGDHVSVTGIFL R S I T R I 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1316.6936 P33993 P33993 252 263 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.044019 74.841 By MS/MS 5 0 1 1 7316700 7316700 0 12313 808 13075 31189 24879 24879 0 73383 0 SITYSLENK ADPEALAEILLETCKSITYSLENKTYSSVR LLETCKSITYSLENKTYSSVRTEALSVIEL K S I N K T 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 2 1 0 1 0 0 0 9 0 1053.5342 Q5VYK3 Q5VYK3 1770 1778 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00096326 134.48 By MS/MS 2.5 0.5 1 1 2 2149300 2149300 0 12314 1656 13076 31190;31191 24880 24880 1 615430 0 SIVDKEGVPR LEEFELLGKAYGKAKSIVDKEGVPRFYIRI YGKAKSIVDKEGVPRFYIRILADLEDYLNE K S I P R F 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 1 0 0 0 2 0 0 10 1 1098.6033 Q99613;B5ME19 Q99613 95 104 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 9.426E-07 182.39 By MS/MS 5 2.58 2 2 2 2 2 2 2 2 2 18 47517000 47517000 0 12315 2252 13077 31192;31193;31194;31195;31196;31197;31198;31199;31200;31201;31202;31203;31204;31205;31206;31207;31208;31209 24881;24882;24883;24884;24885;24886;24887;24888;24889 24884 9 3693500 0 SIVEEIEDLVAR ALQTASHLSQQADLRSIVEEIEDLVARLDE DLRSIVEEIEDLVARLDELGGVYLQFEEGL R S I A R L 1 1 0 1 0 0 3 0 0 2 1 0 0 0 0 1 0 0 0 2 0 0 12 0 1371.7246 P04844 P04844 179 190 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 4.4803E-18 261.16 By MS/MS 5.5 0.5 1 1 2 218610 218610 0 12316 479 13078 31210;31211 24890 24890 1 1575.7 0 SIYGEKFEDENFILK CQGGDFTRHNGTGGKSIYGEKFEDENFILK SIYGEKFEDENFILKHTGPGILSMANAGPN K S I L K H 0 0 1 1 0 0 3 1 0 2 1 2 0 2 0 1 0 0 1 0 0 0 15 1 1830.904 P62937 P62937 77 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 3 0.0054286 93.243 By MS/MS 10 0 1 1 934170 934170 0 12317 1188 13079 31212 24891;24892 24892 2 50348 0 SIYSLILGQDNAADQSR VSSASWYFLNVFGLRSIYSLILGQDNAADQ YSLILGQDNAADQSRMMQEQMTGAAMAMPA R S I S R M 2 1 1 2 0 2 0 1 0 2 2 0 0 0 0 3 0 0 1 0 0 0 17 0 1849.917 Q9P0I2 Q9P0I2 181 197 EMC3 ER membrane protein complex subunit 3 yes yes 2 1.149E-07 258.39 By MS/MS 8.5 0.5 1 1 2 974770 974770 0 12318 2663 13080 31213;31214 24893 24893 1 12567 0 SIYYITGESK TSLSEYVSRMKETQKSIYYITGESKEQVAN KETQKSIYYITGESKEQVANSAFVERVRKR K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 0.00075943 128.27 By MS/MS 4 2 1 1 1 1 1 1 1 7 39261000 39261000 0 12319 521 13081 31215;31216;31217;31218;31219;31220;31221 24894;24895 24894 2 3326900 0 SKADYTSHLR MRQAAAIILNIYCSRSKADYTSHLRSLVSG IYCSRSKADYTSHLRSLVSGLIRLFNDSSP R S K L R S 1 1 0 1 0 0 0 0 1 0 1 1 0 0 0 2 1 0 1 0 0 0 10 1 1176.5887 Q92616 Q92616 2182 2191 GCN1L1 Translational activator GCN1 yes yes 3 0.0069165 104.07 By MS/MS 3 0.816 1 1 1 3 2611900 2611900 0 12320 2064 13082 31222;31223;31224 24896;24897 24897 2 691950 0 SKAEAESLYQSK IIAEVKAQYEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 1339.662 CON__P04264;P04264 P04264 365 376 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 8.077E-25 289.59 By MS/MS By MS/MS 5.31 2.91 4 4 4 4 4 2 3 4 4 3 18 18 285730000 137280000 148450000 + 12321 471;45 13083 31225;31226;31227;31228;31229;31230;31231;31232;31233;31234;31235;31236;31237;31238;31239;31240;31241;31242;31243;31244;31245;31246;31247;31248;31249;31250;31251;31252;31253;31254;31255;31256;31257;31258;31259;31260 24898;24899;24900;24901;24902;24903;24904;24905;24906;24907;24908;24909;24910;24911;24912;24913;24914;24915;24916;24917;24918;24919;24920;24921;24922;24923;24924;24925;24926;24927;24928;24929;24930;24931;24932;24933;24934;24935 24928 37 10579000 58399000 SKAEAESLYQSKYEELQITAGR IIAEVKAQYEDIAQKSKAEAESLYQSKYEE LYQSKYEELQITAGRHGDSVRNSKIEISEL K S K G R H 3 1 0 0 0 2 4 1 0 1 2 2 0 0 0 3 1 0 2 0 0 0 22 2 2500.2445 CON__P04264;P04264 P04264 365 386 KRT1 Keratin, type II cytoskeletal 1 no no 3;4 2.076E-17 240.91 By MS/MS By MS/MS 5.92 2.25 2 2 1 3 2 2 6 6 74126000 67751000 6375300 + 12322 471;45 13084 31261;31262;31263;31264;31265;31266;31267;31268;31269;31270;31271;31272 24936;24937;24938;24939;24940;24941;24942;24943;24944;24945;24946 24936 11 895740 1109700 SKDEAEALYQTK IIDAVRTQYELIAQRSKDEAEALYQTKYQE AQRSKDEAEALYQTKYQELQITAGRHGDDL R S K T K Y 2 0 0 1 0 1 2 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 12 1 1381.6725 CON__Q7Z794;Q7Z794 CON__Q7Z794 349 360 KRT77 Keratin, type II cytoskeletal 1b no no 2 5.4339E-20 250.26 By MS/MS 4.5 1.5 1 1 2 501560 0 501560 + 12323 72 13085 31273;31274 24947;24948;24949 24947 3 0 210490 SKDFVQVMR LCRVEGMTELYFQLKSKDFVQVMRHRDDER LYFQLKSKDFVQVMRHRDDERQKVCLDIIY K S K M R H 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 9 1 1108.5699 P78527 P78527 2417 2425 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0075477 101.46 By MS/MS 1.5 0.5 1 1 2 269220 269220 0 12324 1225 13086 31275;31276 24950 24950 732 1 78459 0 SKDKLDQVSSEIK EELAKHGMKVVLISRSKDKLDQVSSEIKEK SRSKDKLDQVSSEIKEKFKVETRTIAVDFA R S K I K E 0 0 0 2 0 1 1 0 0 1 1 3 0 0 0 3 0 0 0 1 0 0 13 2 1475.7831 Q53GQ0 Q53GQ0 83 95 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 0.00015045 171.99 By MS/MS 8 0 2 2 5724200 5724200 0 12325 1587 13087 31277;31278 24951;24952 24952 2 72267 0 SKDLAEVGEGGGHSQAR IGVGEKDWTSDVNVKSKDLAEVGEGGGHSQ DLAEVGEGGGHSQARESGVGQTDWSGVEAG K S K A R E 2 1 0 1 0 1 2 4 1 0 1 1 0 0 0 2 0 0 0 1 0 0 17 1 1696.8129 Q9C0C2 Q9C0C2 1235 1251 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.00024292 168.68 By MS/MS 2 0 1 1 501810 501810 0 12326 2390 13088 31279 24953 24953 1 169730 0 SKDPSGLLISVIR AAEAAGGKYRSTVSKSKDPSGLLISVIRTL SKSKDPSGLLISVIRTLSTSDDVEDRENEK K S K I R T 0 1 0 1 0 0 0 1 0 2 2 1 0 0 1 3 0 0 0 1 0 0 13 1 1383.8086 Q96A65 Q96A65 17 29 EXOC4 Exocyst complex component 4 yes yes 2;3 0.0034352 102.33 By MS/MS 4 0 2 2 595420 595420 0 12327 2104 13089 31280;31281 24954;24955 24955 2 56033 0 SKDSLVDIIGICK TVQFDFTGIDDLENKSKDSLVDIIGICKSY NKSKDSLVDIIGICKSYEDATKITVRSNNR K S K C K S 0 0 0 2 1 0 0 1 0 3 1 2 0 0 0 2 0 0 0 1 0 0 13 1 1446.7752 P27694 P27694 312 324 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 3 0.030583 68.972 By MS/MS 5 0 1 1 343840 343840 0 12328 744 13090 31282 24956 24956 1 3448.5 0 SKDTYLLYEGR HMPKSTIETALKMEKSKDTYLLYEGRGPGG KMEKSKDTYLLYEGRGPGGSSLLIEALSNS K S K G R G 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 1 1 0 2 0 0 0 11 1 1343.6721 Q9BSH4 Q9BSH4 131 141 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 2.6301E-05 177.57 By MS/MS 8 0 1 1 2684100 2684100 0 12329 2306 13091 31283 24957 24957 1 33887 0 SKDVNGPEPLNSR MRTLAHFRPIEDNEKSKDVNGPEPLNSRSN EKSKDVNGPEPLNSRSNKLHFAFRLYDLDK K S K S R S 0 1 2 1 0 0 1 1 0 0 1 1 0 0 2 2 0 0 0 1 0 0 13 1 1411.7056 Q99653 Q99653 99 111 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.012452 110.98 By MS/MS 9 0 1 1 155350 155350 0 12330 2257 13092 31284 24958 24958 1 3057.3 0 SKEEAEALYHSK IIAEVKAQYEEIAQRSKEEAEALYHSKYEE AQRSKEEAEALYHSKYEELQVTVGRHGDSL R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 1390.6729 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 363 374 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3;4 6.6909E-19 263.07 By MS/MS By MS/MS 4.83 2.68 5 4 6 6 6 4 3 2 3 3 17 25 131910000 49823000 82084000 + 12331 55 13093 31285;31286;31287;31288;31289;31290;31291;31292;31293;31294;31295;31296;31297;31298;31299;31300;31301;31302;31303;31304;31305;31306;31307;31308;31309;31310;31311;31312;31313;31314;31315;31316;31317;31318;31319;31320;31321;31322;31323;31324;31325;31326 24959;24960;24961;24962;24963;24964;24965;24966;24967;24968;24969;24970;24971;24972;24973;24974;24975;24976;24977;24978;24979;24980;24981;24982;24983;24984;24985;24986;24987;24988;24989;24990;24991 24965 33 4022600 34852000 SKEEHHEK ANAVLLGIQESKDSRSKEEHHEK_______ QESKDSRSKEEHHEK_______________ R S K E K - 0 0 0 0 0 0 3 0 2 0 0 2 0 0 0 1 0 0 0 0 0 0 8 1 1022.4781 Q9Y2Q9 Q9Y2Q9 180 187 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 1.3078E-05 190.26 By MS/MS 9.5 0.5 1 1 2 107300 107300 0 12332 2838 13094 31327;31328 24992 24992 1 2381.9 0 SKEELHQDCLVLATAK KARSLLPLSTSLDHRSKEELHQDCLVLATA KEELHQDCLVLATAKHSRELNEDVSADVEE R S K A K H 2 0 0 1 1 1 2 0 1 0 3 2 0 0 0 1 1 0 0 1 0 0 16 1 1840.9353 Q8TEQ6 Q8TEQ6 859 874 GEMIN5 Gem-associated protein 5 yes yes 3 0.00045363 126.07 By MS/MS 2.5 0.5 1 1 2 2029000 2029000 0 12333 2002 13095 31329;31330 24993 24993 1 78111 0 SKEEQEKVEADMIQQR VPLMKNGAVQTIAQRSKEEQEKVEADMIQQ KEEQEKVEADMIQQREEWDRKKKMKVKRER R S K Q R E 1 1 0 1 0 3 4 0 0 1 0 2 1 0 0 1 0 0 0 1 0 0 16 2 1946.9368 P82675 P82675 161 176 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 3 0.00058173 160.04 By MS/MS 7 0 1 1 1783500 1783500 0 12334 1233 13096 31331 24994 24994 1 27998 0 SKELTTEIDNNIEQISSYK AEQNRKDAEAWFNEKSKELTTEIDNNIEQI TTEIDNNIEQISSYKSEITELRRNVQALEI K S K Y K S 0 0 2 1 0 1 3 0 0 3 1 2 0 0 0 3 2 0 1 0 0 0 19 1 2211.0907 CON__P13645;P13645 CON__P13645 344 362 KRT10 Keratin, type I cytoskeletal 10 yes no 3 6.9763E-05 145.71 By MS/MS By MS/MS 3.67 0.471 1 2 2 1 5328300 4754700 573640 + 12335 50 13097 31332;31333;31334 24995;24996;24997 24996 3 447440 73016 SKFDNLYGCR ILKVPAINVNDSVTKSKFDNLYGCRESLID DSVTKSKFDNLYGCRESLIDGIKRATDVMI K S K C R E 0 1 1 1 1 0 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 10 1 1258.5765 P23526 P23526 187 196 AHCY Adenosylhomocysteinase yes yes 2 0.0044426 125.57 By MS/MS 7.5 0.5 1 1 2 3707800 3707800 0 12336 706 13098 31335;31336 24998 24998 1 57643 0 SKFENEEFFR ______________________________ VPDQRSKFENEEFFRKLSRECEIKYTGFRD R S K F R K 0 1 1 0 0 0 3 0 0 0 0 1 0 3 0 1 0 0 0 0 0 0 10 1 1331.6146 Q13951 Q13951 10 19 CBFB Core-binding factor subunit beta yes yes 2 0.00021447 157.78 By MS/MS 9 0 1 1 1726200 1726200 0 12337 1416 13099 31337 24999 24999 1 33971 0 SKGAVAIADAIR LRQVEVINFGDCLVRSKGAVAIADAIRGGL LVRSKGAVAIADAIRGGLPKLKELNLSFCE R S K I R G 4 1 0 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 1 0 0 12 1 1170.6721 P46060 P46060 278 289 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0079193 113.95 By MS/MS 5.5 0.5 1 1 2 4570400 4570400 0 12338 908 13100 31338;31339 25000 25000 1 42734 0 SKGFGFVCFSSPEEATK FGTITSAKVMMEGGRSKGFGFVCFSSPEEA GFGFVCFSSPEEATKAVTEMNGRIVATKPL R S K T K A 1 0 0 0 1 0 2 2 0 0 0 2 0 3 1 3 1 0 0 1 0 0 17 1 1876.8665 P11940;Q9H361;Q13310 P11940 332 348 PABPC1;PABPC3;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 4 no no 2;3 0.0020076 148.18 By MS/MS 5.75 0.829 2 1 1 4 6228300 6228300 0 12339 586;1369 13101 31340;31341;31342;31343 25001;25002 25002 2 60726 0 SKGQESFK SNQNGKDSKPSSTPRSKGQESFKKQEKTPK KPSSTPRSKGQESFKKQEKTPKTPKGPSSV R S K F K K 0 0 0 0 0 1 1 1 0 0 0 2 0 1 0 2 0 0 0 0 0 0 8 1 909.4556 P06748 P06748 222 229 NPM1 Nucleophosmin yes yes 2 0.0094186 144.12 By MS/MS 7 0 1 1 1602400 1602400 0 12340 503 13102 31344 25003 25003 1 25155 0 SKGQESFKK SNQNGKDSKPSSTPRSKGQESFKKQEKTPK PSSTPRSKGQESFKKQEKTPKTPKGPSSVE R S K K K Q 0 0 0 0 0 1 1 1 0 0 0 3 0 1 0 2 0 0 0 0 0 0 9 2 1037.5506 P06748 P06748 222 230 NPM1 Nucleophosmin yes yes 3 0.0041426 125.71 By MS/MS 7 0 1 1 750360 750360 0 12341 503 13103 31345 25004 25004 1 11779 0 SKIETEIKNK KATRKRVRDALTAEKSKIETEIKNKMQQKS LTAEKSKIETEIKNKMQQKSQKKAELLDNE K S K N K M 0 0 1 0 0 0 2 0 0 2 0 3 0 0 0 1 1 0 0 0 0 0 10 2 1188.6714 Q9HB71 Q9HB71 34 43 CACYBP Calcyclin-binding protein yes yes 2;3 7.6744E-14 234.2 By MS/MS 8 0 2 2 3014000 3014000 0 12342 2501 13104 31346;31347 25005;25006 25006 2 38052 0 SKISVNDFIIK VLLVRKELNKILEGRSKISVNDFIIKASAL LEGRSKISVNDFIIKASALACLKVPEANSS R S K I K A 0 0 1 1 0 0 0 0 0 3 0 2 0 1 0 2 0 0 0 1 0 0 11 1 1262.7234 P10515 P10515 472 482 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2;3 0.00011044 161.67 By MS/MS 5 0 2 2 3723900 3723900 0 12343 561 13105 31348;31349 25007;25008 25007 2 37348 0 SKITVTSEVPFSK AGNLGGGVVTIERSKSKITVTSEVPFSKRY SKSKITVTSEVPFSKRYLKYLTKKYLKKNN K S K S K R 0 0 0 0 0 0 1 0 0 1 0 2 0 1 1 3 2 0 0 2 0 0 13 1 1421.7766 P35268 P35268 68 80 RPL22 60S ribosomal protein L22 yes yes 2 0.038706 95.183 By MS/MS 10 0 1 1 196760 196760 0 12344 819 13106 31350 25009 25009 1 10605 0 SKKDQGELER KKVIQYLAYVASSHKSKKDQGELERQLLQA ASSHKSKKDQGELERQLLQANPILEAFGNA K S K E R Q 0 1 0 1 0 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 10 2 1188.6099 P35579 P35579 200 209 MYH9 Myosin-9 yes yes 3 0.0098267 90.913 By MS/MS 2 0 1 1 309580 309580 0 12345 824 13107 31351 25010 25010 1 104710 0 SKLESLCR KDHLRGEHSKAVLARSKLESLCRELQRHNR SKAVLARSKLESLCRELQRHNRSLKEEGVQ R S K C R E 0 1 0 0 1 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 8 1 991.51206 P40222;Q8N3L3;Q9NUQ3 P40222 239 246 TXLNA;TXLNB;TXLNG Alpha-taxilin;Beta-taxilin;Gamma-taxilin no no 2 0.031941 117.89 By MS/MS 5.5 0.5 1 1 2 5290300 5290300 0 12346 857;2584 13108 31352;31353 25011 25011 1 50514 0 SKNHYQK GIPDDRDGLFDTIQRSKNHYQKRAYQCIKC GLFDTIQRSKNHYQKRAYQCIKCMVALFSN R S K Q K R 0 0 1 0 0 1 0 0 1 0 0 2 0 0 0 1 0 0 1 0 0 0 7 1 903.45626 Q93008;O00507 Q93008 2376 2382 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.01768 162.31 By MS/MS 2 0 1 1 93026 93026 0 12347 2085 13109 31354 25012 25012 1 31465 0 SKPVFSESLSD DTSQFILNRLEQTQKSKPVFSESLSD____ QTQKSKPVFSESLSD_______________ K S K S D - 0 0 0 1 0 0 1 0 0 0 1 1 0 1 1 4 0 0 0 1 0 0 11 1 1194.5768 O60220 O60220 87 97 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 2 0.0058366 131.12 By MS/MS By matching 10 0 2 1 1 1810000 1776800 33222 12348 249 13110 31355;31356 25013 25013 1 95762 42533 SKTEALKK SEISLKNDLEKGDVKSKTEALKKVIIMILN LEKGDVKSKTEALKKVIIMILNGEKLPGLL K S K K K V 1 0 0 0 0 0 1 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 8 2 903.53893 P53618 P53618 37 44 COPB1 Coatomer subunit beta yes yes 2;3 0.0035227 158.07 By MS/MS 4.5 0.5 2 2 4 1159100 1159100 0 12349 1033 13111 31357;31358;31359;31360 25014;25015 25014 2 88429 0 SKTEYPLHK DFSSMSAQLLYKMIKSKTEYPLHKAIKVER LYKMIKSKTEYPLHKAIKVEREDVVFLYLI K S K H K A 0 0 0 0 0 0 1 0 1 0 1 2 0 0 1 1 1 0 1 0 0 0 9 1 1101.5819 Q9P2R3 Q9P2R3 216 224 ANKFY1 Rabankyrin-5 yes yes 3 0.03296 72.243 By MS/MS 3 0 1 1 153970 153970 0 12350 2689 13112 31361 25016 25016 1 2817.2 0 SKTSPVVSGSSSK DEHVHSKLEGSKVTKSKTSPVVSGSSSKST TKSKTSPVVSGSSSKSTTLPRPRPTRTSLL K S K S K S 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1 6 1 0 0 2 0 0 13 1 1249.6514 Q5SW79 Q5SW79 1076 1088 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0017604 146.5 By MS/MS 2 0 1 1 113010 113010 0 12351 1623 13113 31362 25017 25017 1 38225 0 SKTVYSILR VSPEEAIKCEDKFTKSKTVYSILRHVAEVL EDKFTKSKTVYSILRHVAEVLEYTKDEQLE K S K L R H 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 2 1 0 1 1 0 0 9 1 1065.6182 P05198 P05198 105 113 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.00807 125.97 By MS/MS 8.5 1.12 1 1 1 1 4 4672300 4672300 0 12352 489 13114 31363;31364;31365;31366 25018 25018 1 85419 0 SKVDEAVAVLQAHQAK NSELLHMLESPESLRSKVDEAVAVLQAHQA KVDEAVAVLQAHQAKEAAQKAVNSATGVPT R S K A K E 4 0 0 1 0 2 1 0 1 0 1 2 0 0 0 1 0 0 0 3 0 0 16 1 1692.9159 P11940;Q9H361 P11940 605 620 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 3 0.003177 116.87 By MS/MS 6 0.816 1 1 1 3 23439000 23439000 0 12353 586 13115 31367;31368;31369 25019;25020 25019 2 236690 0 SKVEETTEHLVTK HGKDKENRGINTLERSKVEETTEHLVTKSR ERSKVEETTEHLVTKSRLPLRAQINL____ R S K T K S 0 0 0 0 0 0 3 0 1 0 1 2 0 0 0 1 3 0 0 2 0 0 13 1 1499.7831 P52732 P52732 1033 1045 KIF11 Kinesin-like protein KIF11 yes yes 3 0.021308 77.204 By MS/MS By matching 3 0 2 1 1 885320 838310 47018 12354 1021 13116 31370;31371 25021 25021 1 15339 5984.7 SKVTLLEGDHVR FVIPKELPFGDKDTKSKVTLLEGDHVRFNI DTKSKVTLLEGDHVRFNISTDRRDKLERAT K S K V R F 0 1 0 1 0 0 1 1 1 0 2 1 0 0 0 1 1 0 0 2 0 0 12 1 1352.7412 O75534 O75534 306 317 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 0.00076461 153.49 By MS/MS 5.2 1.17 2 1 1 1 5 7280500 7280500 0 12355 333 13117 31372;31373;31374;31375;31376 25022;25023;25024 25022 3 489360 0 SKYQTEQSLR VVNIDNAKLASDDFRSKYQTEQSLRLLVES SDDFRSKYQTEQSLRLLVESDINSIRRILD R S K L R L 0 1 0 0 0 2 1 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 10 1 1238.6255 CON__O76011;CON__Q8IUT8;O76011 CON__O76011 143 152 KRT34 Keratin, type I cuticular Ha4 yes no 2 1.5737E-07 192.64 By MS/MS 10 0 1 1 151130 0 151130 + 12356 36 13118 31377 25025 25025 1 0 193490 SLAALASR KVLADLAIYEPKTFKSLAALASRRRHEGFA YEPKTFKSLAALASRRRHEGFAAALGDGKE K S L S R R 3 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 8 0 787.4552 Q9BYC9 Q9BYC9 115 122 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.0053054 124.08 By MS/MS By matching 9 0 2 1 1 4557100 4519500 37520 12357 2367 13119 31378;31379 25026 25026 1 88945 85557 SLAASNPILTAK VYTRRKLDAVYYYMRSLAASNPILTAKESL YMRSLAASNPILTAKESLMSLFEETKRKAE R S L A K E 3 0 1 0 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1184.6765 Q86US8 Q86US8 792 803 SMG6 Telomerase-binding protein EST1A yes yes 2 0.001083 123.62 By MS/MS 3 0 1 1 334460 334460 0 12358 1824 13120 31380 25027 25027 1 6119.8 0 SLAASSSFYGQR ILADSRHLWSPFGLRSLAASSSFYGQRNSE GLRSLAASSSFYGQRNSEHDPPYWRGAVWL R S L Q R N 2 1 0 0 0 1 0 1 0 0 1 0 0 1 0 4 0 0 1 0 0 0 12 0 1272.6099 Q13724 Q13724 730 741 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 3.594E-05 171.85 By MS/MS 4.5 0.5 1 1 2 1349500 1349500 0 12359 1408 13121 31381;31382 25028 25028 1 93218 0 SLADCNFSYTSSR RRAQSLKAPSIATIKSLADCNFSYTSSRDA IKSLADCNFSYTSSRDAFGYATLKRLQQQR K S L S R D 1 1 1 1 1 0 0 0 0 0 1 0 0 1 0 4 1 0 1 0 0 0 13 0 1506.6409 Q6R327 Q6R327 1313 1325 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 7.0252E-08 216.91 By MS/MS 2 0 1 1 274370 274370 0 12360 1724 13122 31383 25029 25029 1 92802 0 SLADIAREEASNFR RHVGMAVAGLLADARSLADIAREEASNFRS RSLADIAREEASNFRSNFGYNIPLKHLADR R S L F R S 3 2 1 1 0 0 2 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 14 1 1577.7798 P25788 P25788 87 100 PSMA3 Proteasome subunit alpha type-3 yes yes 3 0.018264 129.76 By MS/MS 8 0 1 1 1111900 1111900 0 12361 726 13123 31384 25030 25030 1 14038 0 SLADQGIINYPYSTR EPILQKLVAAFGELRSLADQGIINYPYSTR SLADQGIINYPYSTREVVNIVKHLQKFPTE R S L T R E 1 1 1 1 0 1 0 1 0 2 1 0 0 0 1 2 1 0 2 0 0 0 15 0 1696.842 A3KMH1 A3KMH1 964 978 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 1.2002E-16 281.32 By MS/MS 2 0 1 1 416080 416080 0 12362 14 13124 31385 25031 25031 1 140730 0 SLAEACSDGDVNAVR MKAENSHNAGQVDTRSLAEACSDGDVNAVR SLAEACSDGDVNAVRKLLDEGRSVNEHTEE R S L V R K 3 1 1 2 1 0 1 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 15 0 1562.6995 Q8IWZ3 Q8IWZ3 208 222 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 5.9599E-07 222.2 By MS/MS 1.5 0.5 1 1 2 410300 410300 0 12363 1872 13125 31386;31387 25032 25032 1 119100 0 SLAEDFAEQPIK FSPEEVLGMVLNYSRSLAEDFAEQPIKDAV YSRSLAEDFAEQPIKDAVITVPVFFNQAER R S L I K D 2 0 0 1 0 1 2 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 12 0 1346.6718 Q9Y4L1 Q9Y4L1 159 170 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.0046475 129.89 By MS/MS 3 0 1 1 0 0 0 12364 2898 13126 31388 25033 25033 1 0 0 SLAETVLNFPLDK MRQRNNLLCNGLSLKSLAETVLNFPLDKSL LKSLAETVLNFPLDKSLLLRCSNWDAETLT K S L D K S 1 0 1 1 0 0 1 0 0 0 3 1 0 1 1 1 1 0 0 1 0 0 13 0 1445.7766 Q9NVH0 Q9NVH0 209 221 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 7.016E-17 251.81 By MS/MS 5.5 0.5 1 1 2 485180 485180 0 12365 2594 13127 31389;31390 25034 25034 1 4271.4 0 SLAGSSGPGASSGTSGDHGELVVR VILRDIARARENIQKSLAGSSGPGASSGTS ASSGTSGDHGELVVRIASLEVENQSLRGVV K S L V R I 2 1 0 1 0 0 1 6 1 0 2 0 0 0 1 6 1 0 0 2 0 0 24 0 2184.0407 P29692 P29692 60 83 EEF1D Elongation factor 1-delta yes yes 2;3 2.9785E-08 147.53 By MS/MS By matching 8 1.15 3 1 1 1 5 1 11523000 11460000 62943 12366 760 13128 31391;31392;31393;31394;31395;31396 25035;25036 25036 2 183670 113360 SLATVHPDSSNLIPK SPASADQRIQEAWKRSLATVHPDSSNLIPK SLATVHPDSSNLIPKLFRPAAFLPFMAPTV R S L P K L 1 0 1 1 0 0 0 0 1 1 2 1 0 0 2 3 1 0 0 1 0 0 15 0 1577.8413 Q6P4A7 Q6P4A7 92 106 SFXN4 Sideroflexin-4 yes yes 2 0.00045845 165.35 By MS/MS 7.5 0.5 1 1 2 2547300 2547300 0 12367 1710 13129 31397;31398 25037 25037 1 37820 0 SLAVSGLGVIGR SLECTLILTEGDSAKSLAVSGLGVIGRDRY SAKSLAVSGLGVIGRDRYGVFPLRGKILNV K S L G R D 1 1 0 0 0 0 0 3 0 1 2 0 0 0 0 2 0 0 0 2 0 0 12 0 1127.6663 Q02880 Q02880 488 499 TOP2B DNA topoisomerase 2-beta yes yes 2 3.8746E-07 202.2 By MS/MS 2 0 1 1 154350 154350 0 12368 1282 13130 31399 25038 25038 1 52208 0 SLCVSTPGHR ASQTNMNDLFQVCPKSLCVSTPGHRTDLFQ QVCPKSLCVSTPGHRTDLFQRDPKNVLITD K S L H R T 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1112.5397 Q92643 Q92643 278 287 PIGK GPI-anchor transamidase yes yes 2 0.010303 93.649 By MS/MS 7 0 1 1 414980 414980 0 12369 2066 13131 31400 25039 25039 1 6514.4 0 SLDAFPEDFCR KEPAEKQKFFQELSKSLDAFPEDFCRHKVL ELSKSLDAFPEDFCRHKVLPQLLTAFEFGN K S L C R H 1 1 0 2 1 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 11 0 1355.5816 Q96KG9 Q96KG9 300 310 SCYL1 N-terminal kinase-like protein yes yes 2 0.01419 88.681 By MS/MS 4 0 1 1 995030 995030 0 12370 2188 13132 31401 25040 25040 1 93639 0 SLDEQANQENDALHKK VTGEGIEELKNCIRKSLDEQANQENDALHK LDEQANQENDALHKKQLLNLWISDTMSSTE K S L K K Q 2 0 2 2 0 2 2 0 1 0 2 2 0 0 0 1 0 0 0 0 0 0 16 1 1838.8759 A4D1E9 A4D1E9 342 357 GTPBP10 GTP-binding protein 10 yes yes 3 0.023389 72.815 By MS/MS 7 0 1 1 1526500 1526500 0 12371 15 13133 31402 25041 25041 1 23963 0 SLDEVYPDPVR EEVPLALTAQVPGLRSLDEVYPDPVRVVSV PGLRSLDEVYPDPVRVVSVGVPVAHALDPA R S L V R V 0 1 0 2 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 2 0 0 11 0 1288.6299 Q5JTZ9 Q5JTZ9 712 722 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.00020798 142.43 By MS/MS By matching 4.33 0.471 2 1 2 1 5103800 5063200 40662 12372 1613 13134 31403;31404;31405 25042 25042 1 431820 86637 SLDGVTNDR ______________________________ NIPKAKSLDGVTNDRTASQGQWGRAWEVDW K S L D R T 0 1 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 975.46214 Q9UBM7 Q9UBM7 14 22 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.00040186 149.72 By MS/MS 3.33 2.62 1 1 1 3 7381800 7381800 0 12373 2701 13135 31406;31407;31408 25043;25044;25045 25043 3 788280 0 SLDIQVPNFPADETK LESLRVIITNFPAAKSLDIQVPNFPADETK SLDIQVPNFPADETKGFHQVPFAPIVFIER K S L T K G 1 0 1 2 0 1 1 0 0 1 1 1 0 1 2 1 1 0 0 1 0 0 15 0 1672.8308 P47897 P47897 587 601 QARS Glutamine--tRNA ligase yes yes 2 0.001145 120.6 By MS/MS 4.5 0.5 1 1 2 2518900 2518900 0 12374 928 13136 31409;31410 25046 25046 1 195920 0 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQY NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1301.7078 CON__P04264;P04264;CON__Q922U2 P04264 344 355 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.4385E-33 300.43 By MS/MS By MS/MS 4.95 2.46 4 3 5 8 9 5 2 3 2 3 24 20 168380000 132810000 35567000 + 12375 471;45;74 13137 31411;31412;31413;31414;31415;31416;31417;31418;31419;31420;31421;31422;31423;31424;31425;31426;31427;31428;31429;31430;31431;31432;31433;31434;31435;31436;31437;31438;31439;31440;31441;31442;31443;31444;31445;31446;31447;31448;31449;31450;31451;31452;31453;31454 25047;25048;25049;25050;25051;25052;25053;25054;25055;25056;25057;25058;25059;25060;25061;25062;25063;25064;25065;25066;25067;25068;25069;25070;25071;25072;25073;25074;25075;25076;25077;25078;25079;25080;25081;25082;25083;25084;25085;25086;25087;25088;25089;25090;25091;25092;25093;25094;25095;25096;25097;25098;25099;25100;25101;25102;25103 25094 57 6045100 19048000 SLDLIESLLR KAPPEDDNREIATWKSLDLIESLLRLAEVG IATWKSLDLIESLLRLAEVGQYEQVKQLFS K S L L R L 0 1 0 1 0 0 1 0 0 1 4 0 0 0 0 2 0 0 0 0 0 0 10 0 1157.6656 A5YKK6 A5YKK6 450 459 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0001294 152.11 By MS/MS 5.5 0.5 1 1 2 17880 17880 0 12376 19 13138 31455;31456 25104;25105 25105 2 179.33 0 SLDNNYSTPNER DREEIQMSNMGSNTKSLDNNYSTPNERGDH NTKSLDNNYSTPNERGDHNRTLDRSGDLGD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 O60716 O60716 899 910 CTNND1 Catenin delta-1 yes yes 2 0.017932 86.344 By MS/MS 4 0 1 1 1185200 1185200 0 12377 272 13139 31457 25106 25106 1 111530 0 SLDQDPVVR VMEWMNNVMNAQAKKSLDQDPVVRAQEIKT NAQAKKSLDQDPVVRAQEIKTKIKELNNTC K S L V R A 0 1 0 2 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 1027.5298 Q92598 Q92598 773 781 HSPH1 Heat shock protein 105 kDa yes yes 2 0.049363 76.221 By MS/MS 4 0 1 1 863230 863230 0 12378 2059 13140 31458 25107 25107 1 81236 0 SLDQTSPCPLVLVR TCETLEKEGPGHMGRSLDQTSPCPLVLVRI RSLDQTSPCPLVLVRIEEMERDLDMYSRAQ R S L V R I 0 1 0 1 1 1 0 0 0 0 3 0 0 0 2 2 1 0 0 2 0 0 14 0 1583.8341 Q6XZF7 Q6XZF7 684 697 DNMBP Dynamin-binding protein yes yes 2 0.00044626 146.16 By MS/MS 2 0 1 1 155990 155990 0 12379 1736 13141 31459 25108 25108 1 52763 0 SLDQYDFSR GPGPLRRTFLVPEIKSLDQYDFSRAKAAAS LVPEIKSLDQYDFSRAKAAASLAWVLRAAF K S L S R A 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 2 0 0 1 0 0 0 9 0 1129.504 Q9P1Y5 Q9P1Y5 23 31 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.014503 92.538 By MS/MS By matching 3 0 2 1 1 333790 278890 54899 12380 2673 13142 31460;31461 25109 25109 1 5102.9 6987.9 SLDVGGPLR LAQMIEKKRKKENSRSLDVGGPLRYAVYGF KKENSRSLDVGGPLRYAVYGFFFTGPLSHF R S L L R Y 0 1 0 1 0 0 0 2 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 912.50288 Q9NR77 Q9NR77 66 74 PXMP2 Peroxisomal membrane protein 2 yes yes 2 0.03764 81.296 By MS/MS 9 0 1 1 800170 800170 0 12381 2549 13143 31462 25110 25110 1 15747 0 SLEAAQDAR GAFEAMAHVVSLVHRSLEAAQDARGHCPQL VSLVHRSLEAAQDARGHCPQLAAYVHYAFR R S L A R G 3 1 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 959.46722 Q96HP0 Q96HP0 818 826 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0011886 131.62 By MS/MS 2.75 1.48 1 1 1 1 4 1511200 1511200 0 12382 2166 13144 31463;31464;31465;31466 25111 25111 1 266010 0 SLEAEGFQVTYLPVQK ITTQTEHKCVLDSCRSLEAEGFQVTYLPVQ LEAEGFQVTYLPVQKSGIIDLKELEAAIQP R S L Q K S 1 0 0 0 0 2 2 1 0 0 2 1 0 1 1 1 1 0 1 2 0 0 16 0 1807.9356 Q9Y697 Q9Y697 165 180 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 5.5779E-07 225.72 By MS/MS 7 0 1 1 1022700 1022700 0 12383 2935 13145 31467 25112 25112 1 16054 0 SLEATLGR VNVRTTKPPKRRPLKSLEATLGRLRRATEY PKRRPLKSLEATLGRLRRATEYAPKKRIEP K S L G R L 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 8 0 845.46068 Q92665 Q92665 128 135 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0060873 120.46 By MS/MS By matching 7 0 2 1 1 4992700 4948400 44336 12384 2067 13146 31468;31469 25113 25113 1 77681 79848 SLEDALAEAQR ELEKRKDKETGGILRSLEDALAEAQRVNTK GILRSLEDALAEAQRVNTKSQSAFDLKKKN R S L Q R V 3 1 0 1 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1201.5939 O95347 O95347 298 308 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 9.8159E-10 221.68 By MS/MS By matching 3 0 2 1 1 2109400 2072300 37056 12385 405 13147 31470;31471 25114 25114 1 37918 4716.7 SLEDALR QQEKQEQVKIESLAKSLEDALRQTASVTLQ VKIESLAKSLEDALRQTASVTLQAIAAQNA K S L L R Q 1 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 802.41848 Q16891 Q16891 223 229 IMMT MICOS complex subunit MIC60 yes yes 2 0.047397 91.626 By MS/MS 4 0 1 1 980500 980500 0 12386 1563 13148 31472 25115 25115 1 92271 0 SLEDKAAEVVK KDTEKEVDDLTAELKSLEDKAAEVVKNTNA AELKSLEDKAAEVVKNTNAAEESLPEIQKE K S L V K N 2 0 0 1 0 0 2 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 11 1 1187.6398 Q9NTJ3 Q9NTJ3 964 974 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.030499 100.82 By MS/MS 2.5 0.5 1 1 2 819530 819530 0 12387 2575 13149 31473;31474 25116 25116 1 54583 0 SLEDPFFVVR ______________________________ ______________________________ M S L V R G 0 1 0 1 0 0 1 0 0 0 1 0 0 2 1 1 0 0 0 2 0 0 10 0 1207.6237 O60499 O60499 2 11 STX10 Syntaxin-10 yes yes 2 0.010858 95.099 By MS/MS 8 0 1 1 77086 77086 0 12388 259 13150 31475 25117 25117 1 973.21 0 SLEDPYSQQIR GIVWKTGPRTTIFVKSLEDPYSQQIRLQQQ IFVKSLEDPYSQQIRLQQQQAQQPLQQQQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 Q9NVH2 Q9NVH2 930 940 INTS7 Integrator complex subunit 7 yes yes 2 5.1184E-05 156.16 By MS/MS 4 0 1 1 918690 918690 0 12389 2596 13151 31476 25118 25118 1 86454 0 SLEDTKNR IELQSQLSKKAALEKSLEDTKNRYCGQLQM KKAALEKSLEDTKNRYCGQLQMIQEQISNL K S L N R Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 8 1 961.48287 P35527;CON__P35527 P35527 397 404 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 0.00028965 176.09 By MS/MS By MS/MS 4.82 2.79 2 2 3 2 1 3 1 2 1 7 10 18677000 11730000 6946300 + 12390 822 13152 31477;31478;31479;31480;31481;31482;31483;31484;31485;31486;31487;31488;31489;31490;31491;31492;31493 25119;25120;25121;25122;25123;25124;25125;25126;25127;25128;25129;25130;25131;25132 25120 14 890290 4642600 SLEDVVR GLYQYKNICQQVNIKSLEDVVRAYLKMAEE ICQQVNIKSLEDVVRAYLKMAEEKTEAAKE K S L V R A 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 816.43413 Q14152 Q14152 85 91 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.034089 101.64 By MS/MS By matching 3 1.29 1 1 2 1 1 5 1 59597000 58989000 607990 12391 1422 13153 31494;31495;31496;31497;31498;31499 25133;25134;25135;25136 25135 4 1872500 77389 SLEEAEAYSR IVEEVKAQYDAVAARSLEEAEAYSRSQLEE AVAARSLEEAEAYSRSQLEEQAARSAEYGS R S L S R S 2 1 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 10 0 1153.5251 CON__Q6KB66-1;Q6KB66;CON__Q0VBK2 CON__Q6KB66-1 266 275 KRT80 Keratin, type II cytoskeletal 80 yes no 2 1.0239E-05 169.65 By MS/MS 6 2.83 1 1 1 1 1 5 705550 0 705550 + 12392 69 13154 31500;31501;31502;31503;31504 25137;25138;25139;25140;25141 25141 5 0 1032600 SLEEEKYDMSGAR ______________________________ PRSLEEEKYDMSGARLALILCVTKAREGSE R S L A R L 1 1 0 1 0 0 3 1 0 0 1 1 1 0 0 2 0 0 1 0 0 0 13 1 1513.6719 P31944 P31944 6 18 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2;3 0.00019029 170.4 By MS/MS By MS/MS 5.33 3.35 1 2 1 2 1 5 1423400 68084 1355400 12393 792 13155 31505;31506;31507;31508;31509;31510 25142;25143;25144;25145 25144 388 3 3669.5 350290 SLEEEVTCSICLDYLRDPVTIDCGHVFCR ______________________________ LRDPVTIDCGHVFCRSCTTDVRPISGSRPV R S L C R S 0 2 0 3 4 0 3 1 1 2 3 0 0 1 1 2 2 0 1 3 0 0 29 1 3542.5938 Q12899 Q12899 9 37 TRIM26 Tripartite motif-containing protein 26 yes yes 5 0.049684 22.533 By MS/MS 2 0 1 1 88972 0 88972 12394 1336 13156 31511 25146 25146 1 0 125820 SLEEIYLFSLPIK PVTKLGRLVKDMKIKSLEEIYLFSLPIKES IKSLEEIYLFSLPIKESEIIDFFLGASLKD K S L I K E 0 0 0 0 0 0 2 0 0 2 3 1 0 1 1 2 0 0 1 0 0 0 13 0 1550.8596 P15880 P15880 77 89 RPS2 40S ribosomal protein S2 yes yes 2 0.00031777 182.28 By MS/MS 8 0 1 1 119460 119460 0 12395 627 13157 31512 25147;25148 25147 2 1508.2 0 SLEELPVDIILASVG RLLLLDTVTMQVTARSLEELPVDIILASVG SLEELPVDIILASVG_______________ R S L V G - 1 0 0 1 0 0 2 1 0 2 3 0 0 0 1 2 0 0 0 2 0 0 15 0 1553.8552 Q9Y678 Q9Y678 860 874 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0075929 105.2 By MS/MS 4 0 1 1 131080 131080 0 12396 2933 13158 31513 25149 25149 1 12336 0 SLEETIIQK TWGPTIAALSYVFDKSLEETIIQKAISGFR SYVFDKSLEETIIQKAISGFRKCAMISAHY K S L Q K A 0 0 0 0 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 9 0 1059.5812 Q92538 Q92538 945 953 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00066887 141.52 By MS/MS 2.5 0.5 1 1 2 2005400 2005400 0 12397 2050 13159 31514;31515 25150;25151 25150 2 473460 0 SLEGEVVPFK SVCFDEKSKHITAMKSLEGEVVPFKNKVPL ITAMKSLEGEVVPFKNKVPLSNNVETWLND K S L F K N 0 0 0 0 0 0 2 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 10 0 1103.5863 Q8NCM8 Q8NCM8 1478 1487 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.018983 87.308 By MS/MS 1.5 0.5 1 1 2 252020 252020 0 12398 1952 13160 31516;31517 25152 25152 1 75429 0 SLEGTEAQVFK LCGMLHRPRHATVSRSLEGTEAQVFKAKFK TVSRSLEGTEAQVFKAKFKNWDDVLTVDYT R S L F K A 1 0 0 0 0 1 2 1 0 0 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1207.6085 Q13045 Q13045 822 832 FLII Protein flightless-1 homolog yes yes 2 6.6519E-06 176.33 By MS/MS 3 0 1 1 1095000 1095000 0 12399 1348 13161 31518 25153 25153 1 20036 0 SLEKVCADLIR AIHRIRITLTSRNVKSLEKVCADLIRGAKE RNVKSLEKVCADLIRGAKEKNLKVKGPVRM K S L I R G 1 1 0 1 1 0 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 11 1 1302.6966 P60866 P60866 31 41 RPS20 40S ribosomal protein S20 yes yes 2;3 0.0031273 104.07 By MS/MS 9.75 0.433 1 3 4 27035000 27035000 0 12400 1098 13162 31519;31520;31521;31522 25154;25155;25156 25154 3 1448800 0 SLELNGAVEPSEGAPR ILDMRSKRVRSLLGRSLELNGAVEPSEGAP LELNGAVEPSEGAPRAPPGPAGLSGGESLL R S L P R A 2 1 1 0 0 0 3 2 0 0 2 0 0 0 2 2 0 0 0 1 0 0 16 0 1624.8057 Q9NRL3 Q9NRL3 206 221 STRN4 Striatin-4 yes yes 2 1.5839E-05 200.76 By MS/MS 4 0 1 1 1010100 1010100 0 12401 2555 13163 31523 25157 25157 1 95058 0 SLELVMDMFK DIIDGYNAQYNASKKSLELVMDMFKRLKVP NASKKSLELVMDMFKRLKVPVHHTWGNHEF K S L F K R 0 0 0 1 0 0 1 0 0 0 2 1 2 1 0 1 0 0 0 1 0 0 10 0 1211.593 Q3LIE5 Q3LIE5 89 98 ADPRM Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase yes yes 2 0.0468 50.607 By matching By MS/MS 3.5 0.5 1 1 1 1 2839500 781700 2057800 12402 1576 13164 31524;31525 25158 25158 880;881 0 73564 261930 SLENIFAESK EVTKEMKTNAMGLIRSLENIFAESKIKSFR MGLIRSLENIFAESKIKSFRRQVQEENFEY R S L S K I 1 0 1 0 0 0 2 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1136.5714 Q15058 Q15058 1466 1475 KIF14 Kinesin-like protein KIF14 yes yes 2 6.7276E-06 176.6 By MS/MS 3 0.816 1 1 1 3 828900 828900 0 12403 1486 13165 31526;31527;31528 25159;25160 25160 2 184860 0 SLEQEEETQPGR ______________________________ ______________________________ M S L G R L 0 1 0 0 0 2 4 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 12 0 1401.6372 Q6P4A7 Q6P4A7 2 13 SFXN4 Sideroflexin-4 yes yes 2 0.00016246 158.3 By MS/MS 7.5 0.5 1 1 2 6607300 6607300 0 12404 1710 13166 31529;31530 25161 25161 1 102970 0 SLEQNIQLPAALLSR LAAANPAYGRYNPRRSLEQNIQLPAALLSR SLEQNIQLPAALLSRFDLLWLIQDRPDRDN R S L S R F 2 1 1 0 0 2 1 0 0 1 4 0 0 0 1 2 0 0 0 0 0 0 15 0 1651.9257 P33993 P33993 500 514 MCM7 DNA replication licensing factor MCM7 yes yes 2 6.7861E-11 231.52 By MS/MS 4.5 0.5 1 1 2 520290 520290 0 12405 808 13167 31531;31532 25162;25163;25164;25165 25164 4 24014 0 SLERAEAGDNLGALVR KNIRTVVTGIEMFHKSLERAEAGDNLGALV LERAEAGDNLGALVRGLKREDLRRGLVMVK K S L V R G 3 2 1 1 0 0 2 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 16 1 1669.8747 P49411 P49411 312 327 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 5.2894E-05 189.09 By MS/MS 7.29 1.03 2 2 2 1 7 54794000 54794000 0 12406 949 13168 31533;31534;31535;31536;31537;31538;31539 25166;25167;25168;25169 25166 4 808640 0 SLESINSR ______________________________ AAKKTKKSLESINSRLQLVMKSGKYVLGYK K S L S R L 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 8 0 904.46141 P62888 P62888 10 17 RPL30 60S ribosomal protein L30 yes yes 2 0.023731 91.318 By MS/MS By matching 10 0 2 1 1 2030900 1975300 55586 12407 1182 13169 31540;31541 25170 25170 1 106460 71166 SLESLDTSLFAK TLEERAQRLFSTKGKSLESLDTSLFAKNPK KGKSLESLDTSLFAKNPKSKGTKRDTERNK K S L A K N 1 0 0 1 0 0 1 0 0 0 3 1 0 1 0 3 1 0 0 0 0 0 12 0 1309.6765 Q12874 Q12874 292 303 SF3A3 Splicing factor 3A subunit 3 yes yes 2 7.818E-13 241.13 By MS/MS 6 0 1 1 1899200 1899200 0 12408 1335 13170 31542 25171 25171 1 13055 0 SLESTTLTEK KPWHKNCFRCAKCGKSLESTTLTEKEGEIY AKCGKSLESTTLTEKEGEIYCKGCYAKNFG K S L E K E 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 3 0 0 0 0 0 10 0 1107.5659 Q16527 Q16527 152 161 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 1.0665E-05 174.02 By MS/MS 9 0 1 1 970500 970500 0 12409 1548 13171 31543 25172 25172 1 19100 0 SLETCMYDHK DDLLIIEEKIDLEVRSLETCMYDHKTFSEI DLEVRSLETCMYDHKTFSEILNRVQKAVDD R S L H K T 0 0 0 1 1 0 1 0 1 0 1 1 1 0 0 1 1 0 1 0 0 0 10 0 1282.5322 Q14204 Q14204 863 872 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00016053 149.82 By MS/MS 1.5 0.5 1 1 2 237700 237700 0 12410 1433 13172 31544;31545 25173 25173 1 74790 0 SLETSLVPLSDPK SLMGQKGHALLIDCRSLETSLVPLSDPKLA CRSLETSLVPLSDPKLAVLITNSNVRHSLA R S L P K L 0 0 0 1 0 0 1 0 0 0 3 1 0 0 2 3 1 0 0 1 0 0 13 0 1384.745 P51570 P51570 205 217 GALK1 Galactokinase yes yes 2 0.00050574 150.09 By MS/MS 7 0 1 1 3128800 3128800 0 12411 997 13173 31546 25174 25174 1 49117 0 SLEVILR IQETQAELPRGSIPRSLEVILRAEAVESAQ LPRGSIPRSLEVILRAEAVESAQAGDKCDF R S L L R A 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 828.5069 Q14566 Q14566 223 229 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.043702 94.407 By MS/MS 4 0 1 1 516810 516810 0 12412 1444 13174 31547 25175 25175 1 48635 0 SLEVLVADLVNAQK KIMEEKIQISGSNYKSLEVLVADLVNAQKD KSLEVLVADLVNAQKDSMQDESSQTSLQKE K S L Q K D 2 0 1 1 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 3 0 0 14 0 1497.8403 P98170 P98170 406 419 XIAP E3 ubiquitin-protein ligase XIAP yes yes 2 1.7327E-07 217.14 By MS/MS 6 0 1 1 97479 97479 0 12413 1250 13175 31548 25176 25176 1 670.09 0 SLEYLPLR VTKRQVILLHTELERSLEYLPLRFGVLTGL LHTELERSLEYLPLRFGVLTGLAAIASLLY R S L L R F 0 1 0 0 0 0 1 0 0 0 3 0 0 0 1 1 0 0 1 0 0 0 8 0 989.55458 Q8WVC6 Q8WVC6 199 206 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.0091878 111.65 By MS/MS 9 0 1 1 1746400 1746400 0 12414 2024 13176 31549 25177 25177 1 34370 0 SLGAEPLEVDLK VRGFDTRAAALEQFKSLGAEPLEVDLKESG QFKSLGAEPLEVDLKESGEGQGGYAKEMSK K S L L K E 1 0 0 1 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 12 0 1269.6816 Q13423 Q13423 268 279 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.0080901 114.89 By MS/MS 1 0 1 1 0 0 0 12415 1381 13177 31550 25178 25178 1 0 0 SLGAVVFSR AVLADSVHLAWDLSRSLGAVVFSRVTNNVV AWDLSRSLGAVVFSRVTNNVVLEAPFLVGI R S L S R V 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 9 0 934.52362 O43482 O43482 100 108 OIP5 Protein Mis18-beta yes yes 2 0.0071098 105.52 By MS/MS 9 0 1 1 347580 347580 0 12416 213 13178 31551 25179 25179 1 6840.5 0 SLGEIPIVESEIK STKEDIQSVMTEIRRSLGEIPIVESEIKKE RRSLGEIPIVESEIKKEAGELKPEEEITVG R S L I K K 0 0 0 0 0 0 3 1 0 3 1 1 0 0 1 2 0 0 0 1 0 0 13 0 1412.7763 P53618 P53618 482 494 COPB1 Coatomer subunit beta yes yes 2 0.00079518 129.82 By MS/MS 4.5 0.5 1 1 2 2678100 2678100 0 12417 1033 13179 31552;31553 25180;25181 25180 2 202950 0 SLGEIPIVESEIKK STKEDIQSVMTEIRRSLGEIPIVESEIKKE RSLGEIPIVESEIKKEAGELKPEEEITVGP R S L K K E 0 0 0 0 0 0 3 1 0 3 1 2 0 0 1 2 0 0 0 1 0 0 14 1 1540.8712 P53618 P53618 482 495 COPB1 Coatomer subunit beta yes yes 2 0.0012971 164.48 By MS/MS 4.5 0.5 1 1 2 9273600 9273600 0 12418 1033 13180 31554;31555 25182;25183 25182 2 675390 0 SLGEISALTSK AELCDDPKERDDILRSLGEISALTSKLADL DILRSLGEISALTSKLADLRRQGKGDSPEA R S L S K L 1 0 0 0 0 0 1 1 0 1 2 1 0 0 0 3 1 0 0 0 0 0 11 0 1104.6027 P18206 P18206 434 444 VCL Vinculin yes yes 2 0.00027042 136.96 By MS/MS By MS/MS 3.67 0.943 2 1 2 1 1555100 1555100 0 12419 653 13181 31556;31557;31558 25184;25185;25186 25185 3 23224 0 SLGLLVR ELAQQVRAVAQPLGRSLGLLVRDLEGGHGM AVAQPLGRSLGLLVRDLEGGHGMRRIRLQL R S L V R D 0 1 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 7 0 756.48577 Q9NUL7 Q9NUL7 229 235 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0053532 154.11 By MS/MS 6 0 1 1 2182500 2182500 0 12420 2582 13182 31559 25187 25187 1 15003 0 SLGLSDEEIVK AAKAGSSKYQWGIMKSLGLSDEEIVKFSEA GIMKSLGLSDEEIVKFSEAEHWLDYFPPLA K S L V K F 0 0 0 1 0 0 2 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1188.6238 Q9P2J5 Q9P2J5 163 173 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 1.6861E-06 182.16 By MS/MS By matching 3.33 0.471 2 1 2 1 5805700 5719600 86138 12421 2684 13183 31560;31561;31562 25188;25189 25188 2 104650 10964 SLGPPQGEEDSVPR ECMAPLTALVKHMHRSLGPPQGEEDSVPRD RSLGPPQGEEDSVPRDLPSWMKFLHGKLGN R S L P R D 0 1 0 1 0 1 2 2 0 0 1 0 0 0 3 2 0 0 0 1 0 0 14 0 1466.7001 P78527 P78527 2107 2120 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00041436 137.95 By MS/MS 2.17 1.07 2 2 1 1 6 8523700 8523700 0 12422 1225 13184 31563;31564;31565;31566;31567;31568 25190;25191;25192;25193 25192 4 2151500 0 SLGPVELLLR EGAENLRRATTDLGRSLGPVELLLRGSSRR TDLGRSLGPVELLLRGSSRRLDLLHQQLQE R S L L R G 0 1 0 0 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 1 0 0 10 0 1095.6652 Q16512 Q16512 69 78 PKN1 Serine/threonine-protein kinase N1 yes yes 2 0.010664 92.838 By MS/MS 4.5 0.5 1 1 2 96911 96911 0 12423 1546 13185 31569;31570 25194 25194 1 7173.9 0 SLGQNPTEAELR GDGCITTRELGTVMRSLGQNPTEAELRDMM VMRSLGQNPTEAELRDMMSEIDRDGNGTVD R S L L R D 1 1 1 0 0 1 2 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 12 0 1313.6575 P27482 P27482 39 50 CALML3 Calmodulin-like protein 3 yes yes 2 0.0076769 131.42 By MS/MS 10 0 1 1 0 0 0 12424 741 13186 31571 25195 25195 1 0 0 SLGSSDLKF DLKEVTEEDLNNHFKSLGSSDLKF______ LNNHFKSLGSSDLKF_______________ K S L K F - 0 0 0 1 0 0 0 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 9 1 952.48656 Q6NVY1 Q6NVY1 378 386 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 0.0055875 116.05 By MS/MS 7 0 1 1 1077700 1077700 0 12425 1691 13187 31572 25196 25196 1 16918 0 SLGYAYVNFQQPADAER PILSIRVCRDMITRRSLGYAYVNFQQPADA GYAYVNFQQPADAERALDTMNFDVIKGKPV R S L E R A 3 1 1 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 2 1 0 0 17 0 1927.9064 P11940;Q13310 P11940 51 67 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2 3.7358E-24 277.31 By MS/MS 5 0 1 1 13076000 13076000 0 12426 586;1369 13188 31573 25197 25197 1 131150 0 SLHDAIMIVR ILRGGAEQFMEETERSLHDAIMIVRRAIKN EETERSLHDAIMIVRRAIKNDSVVAGGGAI R S L V R R 1 1 0 1 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 1 0 0 10 0 1153.6278 Q99832 Q99832 388 397 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.001515 113.66 By MS/MS 6.2 0.4 4 1 5 24569000 24569000 0 12427 2270 13189;13190 31574;31575;31576;31577;31578 25198;25199;25200;25201 25200 1061 4 170310 0 SLHDALCVIR FIRGGNKMIIEEAKRSLHDALCVIRNLIRD EEAKRSLHDALCVIRNLIRDNRVVYGGGAA R S L I R N 1 1 0 1 1 0 0 0 1 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1182.6179 P48643 P48643 401 410 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00032854 138.4 By MS/MS 7 1.67 4 5 2 3 2 2 18 176830000 176830000 0 12428 940 13191 31579;31580;31581;31582;31583;31584;31585;31586;31587;31588;31589;31590;31591;31592;31593;31594;31595;31596 25202;25203;25204;25205;25206;25207;25208;25209;25210;25211;25212;25213;25214;25215 25206 14 1306800 0 SLHDALCVLAQTVK VLRGATQQILDEAERSLHDALCVLAQTVKD RSLHDALCVLAQTVKDSRTVYGGGCSEMLM R S L V K D 2 0 0 1 1 1 0 0 1 0 3 1 0 0 0 1 1 0 0 2 0 0 14 0 1553.8236 P78371 P78371 389 402 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.00044997 166.7 By MS/MS 6.33 0.471 2 1 3 14270000 14270000 0 12429 1222 13192 31597;31598;31599 25216;25217 25216 2 98454 0 SLHDALCVVK ILRGANDFMCDEMERSLHDALCVVKRVLES DEMERSLHDALCVVKRVLESKSVVPGGGAV R S L V K R 1 0 0 1 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 2 0 0 10 0 1140.5961 P17987 P17987 391 400 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.00025941 179.37 By MS/MS 6 0.816 2 2 2 6 23112000 23112000 0 12430 648 13193 31600;31601;31602;31603;31604;31605 25218;25219 25219 2 172550 0 SLHDALCVVKR ILRGANDFMCDEMERSLHDALCVVKRVLES EMERSLHDALCVVKRVLESKSVVPGGGAVE R S L K R V 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 2 0 0 11 1 1296.6972 P17987 P17987 391 401 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.00092177 137.05 By MS/MS 5.43 2.66 1 1 2 2 1 7 53872000 53872000 0 12431 648 13194 31606;31607;31608;31609;31610;31611;31612 25220;25221;25222;25223;25224;25225 25223 6 645410 0 SLHTLFGDELCK AKTCVADESHAGCEKSLHTLFGDELCKVAS CEKSLHTLFGDELCKVASLRETYGDMADCC K S L C K V 0 0 0 1 1 0 1 1 1 0 3 1 0 1 0 1 1 0 0 0 0 0 12 0 1418.6864 CON__P02769 CON__P02769 89 100 yes yes 3 0.00080165 189.57 By MS/MS 6.5 1.12 1 1 1 1 4 5560700 5560700 0 + 12432 43 13195 31613;31614;31615;31616 25226;25227 25226 2 47650 0 SLIEEGGDWDRR YMDNDLITRNTEKAKSLIEEGGDWDRRNRL KAKSLIEEGGDWDRRNRLKVYQGLYCVAIR K S L R R N 0 2 0 2 0 0 2 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1431.6743 Q15008 Q15008 166 177 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.022439 99.013 By MS/MS 7 0 1 1 2553600 2553600 0 12433 1471 13196 31617 25228 25228 1 40087 0 SLILLDECSK NSQHMFEVLAAMNHRSLILLDECSKVVLDN AMNHRSLILLDECSKVVLDNIHGCPLRIMI R S L S K V 0 0 0 1 1 0 1 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 10 0 1176.606 Q9NYY8 Q9NYY8 359 368 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.00017335 148.94 By MS/MS 6 0 1 1 1138500 1138500 0 12434 2640 13197 31618 25229 25229 1 7826.6 0 SLILTALQR TRWRRLAAEQRESLKSLILTALQRETEHCV QRESLKSLILTALQRETEHCVSLSLAQLSA K S L Q R E 1 1 0 0 0 1 0 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1013.6233 Q8TEX9 Q8TEX9 82 90 IPO4 Importin-4 yes yes 2 0.00020247 161.02 By MS/MS 3.5 0.5 1 1 2 535460 535460 0 12435 2005 13198 31619;31620 25230;25231 25231 2 34009 0 SLIVAGLGDGSIR GADSCVTSLSCDSHRSLIVAGLGDGSIRVY HRSLIVAGLGDGSIRVYDRRMALSECRVMT R S L I R V 1 1 0 1 0 0 0 3 0 2 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1256.7089 Q8N122 Q8N122 1179 1191 RPTOR Regulatory-associated protein of mTOR yes yes 2 2.4748E-18 234.9 By MS/MS 3 0 1 1 0 0 0 12436 1899 13199 31621 25232 25232 1 0 0 SLKADLQK LDVGNAEVKLEEENRSLKADLQKLKDELAS KLEEENRSLKADLQKLKDELASTKQKLEKA R S L Q K L 1 0 0 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 8 1 901.52328 P51572 P51572 183 190 BCAP31 B-cell receptor-associated protein 31 yes yes 2;3 0.004627 131.22 By MS/MS 8 0 2 2 5367300 5367300 0 12437 999 13200 31622;31623 25233;25234 25234 2 67762 0 SLKAYGELPEHAK NKADVILKYNADEARSLKAYGELPEHAKIN ARSLKAYGELPEHAKINETDTFGPGDDDEI R S L A K I 2 0 0 0 0 0 2 1 1 0 2 2 0 0 1 1 0 0 1 0 0 0 13 1 1441.7565 P47813;O14602 P47813 102 114 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2;3;4 0.0013853 154.36 By MS/MS By MS/MS 9.2 0.4 4 1 4 1 23347000 23282000 65109 12438 927 13201 31624;31625;31626;31627;31628 25235;25236;25237;25238 25238 4 472590 148470 SLKDEDVLQK WYPARQSLRLDPKGKSLKDEDVLQKLPVGT DPKGKSLKDEDVLQKLPVGTTATLYFRDLG K S L Q K L 0 0 0 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 10 1 1173.6241 Q9NZ01 Q9NZ01 58 67 TECR Very-long-chain enoyl-CoA reductase yes yes 2;3 0.00015291 174.86 By MS/MS By matching 4.12 3.06 2 2 1 3 7 1 5691700 5647700 44046 12439 2642 13202 31629;31630;31631;31632;31633;31634;31635;31636 25239;25240;25241;25242;25243;25244 25240 6 843370 59438 SLKEEGVQR SKLESLCRELQRHNRSLKEEGVQRAREEEE LQRHNRSLKEEGVQRAREEEEKRKEVTSHF R S L Q R A 0 1 0 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1044.5564 P40222 P40222 254 262 TXLNA Alpha-taxilin yes yes 2;3 0.00046776 163.16 By MS/MS 5 0 2 2 4109800 4109800 0 12440 857 13203 31637;31638 25245;25246 25245 2 41219 0 SLKEQAIK CKRKKLEEELEGMRRSLKEQAIKITNLTQQ ELEGMRRSLKEQAIKITNLTQQLEQASIVK R S L I K I 1 0 0 0 0 1 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 8 1 915.53893 P15924 P15924 1604 1611 DSP Desmoplakin yes yes 3 0.0083122 113.26 By MS/MS 3 0 1 1 112910 0 112910 12441 628 13204 31639 25247 25247 1 0 14372 SLLAAQQTFVDR SQALLKGDKSVRVMRSLLAAQQTFVDRLVH VMRSLLAAQQTFVDRLVHLMKAVQRESGNR R S L D R L 2 1 0 1 0 2 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1347.7147 Q8NEB9 Q8NEB9 540 551 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.0016823 111.94 By MS/MS 4 0 1 1 707790 707790 0 12442 1961 13205 31640 25248 25248 1 66608 0 SLLDASEEAIKK VEKMTGLVDEAIDTKSLLDASEEAIKKDLD DTKSLLDASEEAIKKDLDKCKVAMANIQPQ K S L K K D 2 0 0 1 0 0 2 0 0 1 2 2 0 0 0 2 0 0 0 0 0 0 12 1 1302.7031 P18206 P18206 721 732 VCL Vinculin yes yes 2 0.00014327 169.99 By MS/MS 3.5 1.12 1 1 1 1 4 1368800 1368800 0 12443 653 13206 31641;31642;31643;31644 25249 25249 1 106710 0 SLLDIISDPDAGTPEDK FEYEEKIMSKTTLDKSLLDIISDPDAGTPE LDIISDPDAGTPEDKMRLFLIYYISTQQAP K S L D K M 1 0 0 4 0 0 1 1 0 2 2 1 0 0 2 2 1 0 0 0 0 0 17 0 1784.868 Q8WVM8 Q8WVM8 437 453 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 5.2252E-24 270.93 By MS/MS 5 0 1 1 1362300 1362300 0 12444 2028 13207 31645 25250;25251 25251 2 13663 0 SLLDIISDPDAGTPEDKMR FEYEEKIMSKTTLDKSLLDIISDPDAGTPE IISDPDAGTPEDKMRLFLIYYISTQQAPSE K S L M R L 1 1 0 4 0 0 1 1 0 2 2 1 1 0 2 2 1 0 0 0 0 0 19 1 2072.0096 Q8WVM8 Q8WVM8 437 455 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.0020004 97.579 By MS/MS 5 0 2 2 1325200 1325200 0 12445 2028 13208;13209 31646;31647 25252;25253 25252 982 2 13291 0 SLLDILTDPSK IDKNEDRKKDLSKMKSLLDILTDPSKRCPL SKMKSLLDILTDPSKRCPLKTLQKCEIALE K S L S K R 0 0 0 2 0 0 0 0 0 1 3 1 0 0 1 2 1 0 0 0 0 0 11 0 1200.6602 Q96RN5 Q96RN5 568 578 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 2 0.0044397 105.4 By MS/MS 4 0 1 1 52738 52738 0 12446 2222 13210 31648 25254 25254 1 4963 0 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1261.5899 CON__P13645;P13645 CON__P13645 451 464 KRT10 Keratin, type I cytoskeletal 10 yes no 2 3.3422E-29 279.77 By MS/MS By MS/MS 4.96 2.81 3 3 4 3 2 3 2 2 2 2 10 16 686810000 245820000 440990000 + 12447 50 13211 31649;31650;31651;31652;31653;31654;31655;31656;31657;31658;31659;31660;31661;31662;31663;31664;31665;31666;31667;31668;31669;31670;31671;31672;31673;31674 25255;25256;25257;25258;25259;25260;25261;25262;25263;25264;25265;25266;25267;25268;25269;25270;25271;25272;25273;25274;25275;25276;25277;25278;25279;25280;25281;25282;25283;25284;25285;25286;25287;25288;25289;25290;25291;25292;25293;25294;25295 25263 41 17756000 164750000 SLLEGQDAK LDIKTRLEQEIATYRSLLEGQDAKMIGFPS EIATYRSLLEGQDAKMIGFPSSAGSVSPRS R S L A K M 1 0 0 1 0 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 959.49238 CON__P13646-1;P13646 P13646 407 415 KRT13 Keratin, type I cytoskeletal 13 no no 2 0.049842 89.08 By MS/MS 1 0 1 1 106400 0 106400 + 12448 603;51 13212 31675 25296 25296 1 0 106400 SLLEIQQEEAR LSGWGNVSKPSGTTKSLLEIQQEEARQMQK GTTKSLLEIQQEEARQMQKQQQQQQQHQQP K S L A R Q 1 1 0 0 0 2 3 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1314.6779 Q6Y7W6 Q6Y7W6 1001 1011 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 2.1758E-05 170.52 By MS/MS 3 0 1 1 1334500 1334500 0 12449 1738 13213 31676 25297 25297 1 24417 0 SLLEVVVLSR IPPTLAMNPQAQALRSLLEVVVLSRNSRDA AQALRSLLEVVVLSRNSRDAIAALGLLQKA R S L S R N 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 2 0 0 0 3 0 0 10 0 1113.6758 A5YKK6 A5YKK6 1641 1650 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 2.7268E-05 163.16 By MS/MS 1.5 0.5 1 1 2 299220 299220 0 12450 19 13214 31677;31678 25298 25298 1 92261 0 SLLFLDNCLR KEATSIKRVRKSVDRSLLFLDNCLRLQEES KSVDRSLLFLDNCLRLQEESEVLQKSVIIG R S L L R L 0 1 1 1 1 0 0 0 0 0 4 0 0 1 0 1 0 0 0 0 0 0 10 0 1249.6489 Q9H974 Q9H974 167 176 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 2 0.0008784 125.97 By MS/MS 7 0 1 1 111440 111440 0 12451 2482 13215 31679 25299 25299 1 1749.5 0 SLLGELPIDCSPALVR AIRPYHALLLLSDEKSLLGELPIDCSPALV LLGELPIDCSPALVRVIKTTSAVKNLQQLA K S L V R V 1 1 0 1 1 0 1 1 0 1 4 0 0 0 2 2 0 0 0 1 0 0 16 0 1738.9288 Q12980 Q12980 269 284 NPRL3 Nitrogen permease regulator 3-like protein yes yes 2 5.2156E-06 134.56 By MS/MS 6 0 1 1 185370 185370 0 12452 1342 13216 31680 25300 25300 0 1274.3 0 SLLINAVEASCIR ATIHALHVLESGGFRSLLINAVEASCIRTR FRSLLINAVEASCIRTRELQSMADQEQVSP R S L I R T 2 1 1 0 1 0 1 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1444.7708 Q96C36;P32322 P32322 252 264 PYCR2;PYCR1 Pyrroline-5-carboxylate reductase 2;Pyrroline-5-carboxylate reductase 1, mitochondrial no no 2;3 2.3745E-11 228.12 By MS/MS By MS/MS 6.8 2.79 1 1 2 4 1 1 9 1 16003000 15934000 68695 12453 797;2120 13217 31681;31682;31683;31684;31685;31686;31687;31688;31689;31690 25301;25302;25303;25304;25305;25306;25307;25308 25304 8 261040 92701 SLLLLGNER TAKSLDLTQYCFPEKSLLLLGNEREGIPAN YCFPEKSLLLLGNEREGIPANLIQQLDVCV K S L E R E 0 1 1 0 0 0 1 1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 9 0 1013.5869 Q13395 Q13395 1561 1569 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.011433 108.57 By MS/MS 3 0 1 1 0 0 0 12454 1376 13218 31691 25309 25309 1 0 0 SLLLTVSQYK ______________________________ TACLKSLLLTVSQYKAVKSEANATQLLRHL K S L Y K A 0 0 0 0 0 1 0 0 0 0 3 1 0 0 0 2 1 0 1 1 0 0 10 0 1150.6598 Q8TCG1 Q8TCG1 9 18 KIAA1524 Protein CIP2A yes yes 2 0.00056598 132.01 By MS/MS 4 0 1 1 843000 843000 0 12455 1990 13219 31692 25310 25310 1 79332 0 SLLNKPK ______________________________ ______________________________ M S L P K S 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 7 1 798.49634 P62316 P62316 2 8 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.015221 120.65 By MS/MS 10 0 1 1 7380400 7380400 0 12456 1156 13220 31693 25311 25311 1 397780 0 SLLPEKTVTR MLLNLEKHQSHLQAKSLLPEKTVTRDVIGS HLQAKSLLPEKTVTRDVIGSRWLIKEELEE K S L T R D 0 1 0 0 0 0 1 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 10 1 1142.6659 P82933 P82933 183 192 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 0.051133 83.862 By MS/MS 7 0 1 1 472290 472290 0 12457 1239 13221 31694 25312 25312 1 7414 0 SLLQALNEVK KLQGEFQLRLRQLEKSLLQALNEVKGRILD RQLEKSLLQALNEVKGRILDDDTIITTLEN K S L V K G 1 0 1 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1113.6394 Q14204 Q14204 3748 3757 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00023479 144.77 By MS/MS 3 1.41 1 1 1 1 1 5 3587800 3587800 0 12458 1433 13222 31695;31696;31697;31698;31699 25313;25314;25315;25316;25317 25313 5 717400 0 SLLQSLSR IKSIKGLPWQGEDPRSLLQSLSRLQKPRAF WQGEDPRSLLQSLSRLQKPRAFILKSKGIK R S L S R L 0 1 0 0 0 1 0 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 8 0 902.51853 Q13459 Q13459 762 769 MYO9B Unconventional myosin-IXb yes yes 2 0.0085009 112.41 By MS/MS 2 0 1 1 89519 89519 0 12459 1388 13223 31700 25318 25318 1 30279 0 SLLQVLGSVK SFLLNTNMVFQPSVKSLLQVLGSVKNKIEN QPSVKSLLQVLGSVKNKIENFAASQEDFPA K S L V K N 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 10 0 1042.6386 Q8N612 Q8N612 795 804 FAM160A2 FTS and Hook-interacting protein yes yes 2 0.0060354 103.26 By MS/MS 4 0 1 1 74236 74236 0 12460 1926 13224 31701 25319 25319 1 6986.1 0 SLLSAEEAAK LSKVHFTAERSSYYKSLLSAEEAAKQKKEK SSYYKSLLSAEEAAKQKKEKVWAHYEEQPV K S L A K Q 3 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1017.5342 Q7KZF4 Q7KZF4 642 651 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.00072902 128.86 By MS/MS 4 0 1 1 3154800 3154800 0 12461 1755 13225 31702 25320 25320 1 296890 0 SLLVIPNTLAVNAAQDSTDLVAK SMGSREQLAIAEFARSLLVIPNTLAVNAAQ LAVNAAQDSTDLVAKLRAFHNEAQVNPERK R S L A K L 4 0 2 2 0 1 0 0 0 1 4 1 0 0 1 2 2 0 0 3 0 0 23 0 2352.29 P17987 P17987 444 466 TCP1 T-complex protein 1 subunit alpha yes yes 2 8.9066E-08 185.71 By MS/MS 6.33 0.471 2 1 3 7550400 7550400 0 12462 648 13226 31703;31704;31705 25321;25322;25323 25323 3 53878 0 SLLVNPEGPTLMR KEDGLAQQQTQLNLRSLLVNPEGPTLMRLN LRSLLVNPEGPTLMRLNSVQSSERPLFLVH R S L M R L 0 1 1 0 0 0 1 1 0 0 3 0 1 0 2 1 1 0 0 1 0 0 13 0 1425.765 P49327 P49327 2221 2233 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 5.5492E-08 218.55 By MS/MS By MS/MS 3.07 1.49 2 4 3 2 2 1 12 2 34430000 34263000 166290 12463 946 13227;13228 31706;31707;31708;31709;31710;31711;31712;31713;31714;31715;31716;31717;31718;31719 25324;25325;25326;25327;25328;25329;25330;25331;25332;25333;25334;25335;25336 25328 511 13 7857200 235170 SLLVNPVLFPNR PDAKHVFTTFYAKTKSLLVNPVLFPNREDY KTKSLLVNPVLFPNREDYIHLMGYDKEEFI K S L N R E 0 1 2 0 0 0 0 0 0 0 3 0 0 1 2 1 0 0 0 2 0 0 12 0 1367.7925 Q9BUB7 Q9BUB7 218 229 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.000799 128.91 By MS/MS 9 0 1 1 231000 231000 0 12464 2323 13229 31720 25337 25337 1 4546.2 0 SLLVPDHVITR ASTEVGEMAKQYIEKSLLVPDHVITRLMMS YIEKSLLVPDHVITRLMMSELENRRGQHWL K S L T R L 0 1 0 1 0 0 0 0 1 1 2 0 0 0 1 1 1 0 0 2 0 0 11 0 1248.719 P27144 P27144 61 71 AK4 Adenylate kinase 4, mitochondrial yes yes 2 0.0045128 83.883 By MS/MS 8 0 1 1 5106400 5106400 0 12465 738 13230 31721 25338 25338 1 64468 0 SLMDQYFAR IMRTVGPRLDHERAKSLMDQYFARMCSLML DHERAKSLMDQYFARMCSLMLSKELPARIR K S L A R M 1 1 0 1 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 9 0 1129.5226 P78344 P78344 272 280 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.011061 98.582 By MS/MS 4 0 1 1 507710 507710 0 12466 1219 13231 31722 25339 25339 1 47779 0 SLMIQTLEAVK FTNMMMIGGNKVLARSLMIQTLEAVKRKQF VLARSLMIQTLEAVKRKQFEKYHAASAEEQ R S L V K R 1 0 0 0 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 11 0 1231.6846 Q9Y2R9 Q9Y2R9 109 119 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 8.8444E-05 152.64 By MS/MS 8.33 0.471 2 1 3 1715900 1715900 0 12467 2841 13232;13233 31723;31724;31725 25340;25341 25340 1185 2 22284 0 SLMIQTLEAVKR FTNMMMIGGNKVLARSLMIQTLEAVKRKQF LARSLMIQTLEAVKRKQFEKYHAASAEEQA R S L K R K 1 1 0 0 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 12 1 1387.7857 Q9Y2R9 Q9Y2R9 109 120 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 3 0.019644 76.522 By MS/MS 8 0 1 1 718010 718010 0 12468 2841 13234 31726 25342 25342 1185 1 9064.8 0 SLNDITAKER ASVLNPYVKRSIKVKSLNDITAKERFSPLT SIKVKSLNDITAKERFSPLTTNLINLLAEN K S L E R F 1 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1145.6041 P48047 P48047 91 100 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 5.6409E-10 194.12 By MS/MS 8.5 0.5 1 1 2 1635700 1635700 0 12469 932 13235 31727;31728 25343 25343 1 29370 0 SLNESKIEIER LRNEHFQKAIEDKSRSLNESKIEIERLQSL DKSRSLNESKIEIERLQSLTENLTKEHLML R S L E R L 0 1 1 0 0 0 3 0 0 2 1 1 0 0 0 2 0 0 0 0 0 0 11 1 1316.6936 P15924 P15924 1695 1705 DSP Desmoplakin yes yes 2 0.0018819 155.53 By MS/MS By MS/MS 3.67 0.471 1 2 1 2 1482000 539240 942740 12470 628 13236 31729;31730;31731 25344;25345 25344 2 50746 161900 SLNNQFASFIDK PEIQKVKSREREQIKSLNNQFASFIDKVRF QIKSLNNQFASFIDKVRFLEQQNQVLQTKW K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 1382.683 CON__P04264;P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 186 197 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.8208E-37 296.65 By MS/MS By MS/MS 5.18 2.71 2 2 1 2 2 2 2 2 1 1 9 8 99135000 86539000 12597000 + 12471 471;45;34 13237 31732;31733;31734;31735;31736;31737;31738;31739;31740;31741;31742;31743;31744;31745;31746;31747;31748 25346;25347;25348;25349;25350;25351;25352;25353;25354;25355;25356;25357;25358;25359;25360;25361;25362;25363;25364;25365;25366;25367 25346 22 5859200 4413000 SLNNQFASFIDKVR PEIQKVKSREREQIKSLNNQFASFIDKVRF KSLNNQFASFIDKVRFLEQQNQVLQTKWEL K S L V R F 1 1 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 1 0 0 14 1 1637.8526 CON__P04264;P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 186 199 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.0026198 136.27 By MS/MS By MS/MS 4.57 1.18 2 1 2 2 5 2 3663300 3400200 263140 + 12472 471;45;34 13238 31749;31750;31751;31752;31753;31754;31755 25368;25369;25370;25371 25371 4 41328 33494 SLNSFGGCLEGSR RSRGGFSSRGGFSSRSLNSFGGCLEGSRGS SRSLNSFGGCLEGSRGSTWGSGGRLGVRFG R S L S R G 0 1 1 0 1 0 1 3 0 0 2 0 0 1 0 3 0 0 0 0 0 0 13 0 1382.6249 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 40 52 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.00045896 153.54 By matching By MS/MS 5.6 3.01 1 1 1 1 1 1 1 1 2 1 9 1313100 57425 1255700 + 12473 70 13239 31756;31757;31758;31759;31760;31761;31762;31763;31764;31765 25372;25373;25374;25375;25376;25377;25378;25379;25380 25379 9 3095 1177900 SLNVSSSVNQASR SQPGMLLDSWSRMVKSLNVSSSVNQASRLI VKSLNVSSSVNQASRLIDGSEPCWQSSGSQ K S L S R L 1 1 2 0 0 1 0 0 0 0 1 0 0 0 0 5 0 0 0 2 0 0 13 0 1347.6743 O95714 O95714 2788 2800 HERC2 E3 ubiquitin-protein ligase HERC2 yes yes 2 0.0045797 128.36 By MS/MS 1 0 1 1 0 0 0 12474 422 13240 31766 25381 25381 1 0 0 SLPFSENVSAVQK ERGEILLTELQGDSRSLPFSENVSAVQKLD SRSLPFSENVSAVQKLDFSDTMVQQKLDDI R S L Q K L 1 0 1 0 0 1 1 0 0 0 1 1 0 1 1 3 0 0 0 2 0 0 13 0 1404.7249 Q16513 Q16513 21 33 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.029045 84.352 By MS/MS 3 0 1 1 283160 283160 0 12475 1547 13241 31767 25382 25382 1 5181 0 SLPGLASSVKEPLPQAT VSLVQKIELAARRRRSLPGLASSVKEPLPQ PGLASSVKEPLPQAT_______________ R S L A T - 2 0 0 0 0 1 1 1 0 0 3 1 0 0 3 3 1 0 0 1 0 0 17 1 1693.9251 Q9NUL7 Q9NUL7 524 540 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0018814 146.67 By MS/MS 6 0 1 1 4162600 4162600 0 12476 2582 13242 31768 25383 25383 1 28615 0 SLPGQNEDLVLTGYQVDK VRAGDNKYMHLKVFKSLPGQNEDLVLTGYQ GQNEDLVLTGYQVDKNKDDELTGF______ K S L D K N 0 0 1 2 0 2 1 2 0 0 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1974.9898 P01040 P01040 72 89 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 5.3551E-19 227.91 By MS/MS By MS/MS 7.67 3.3 1 2 1 2 1593000 667820 925210 12477 449 13243 31769;31770;31771 25384;25385;25386;25387;25388 25386 5 35993 527990 SLPLVQVDEKGEK KKLSTDVDLIVEVLRSLPLVQVDEKGEKVR LRSLPLVQVDEKGEKVRPNQNRCIVILREI R S L E K V 0 0 0 1 0 1 2 1 0 0 2 2 0 0 1 1 0 0 0 2 0 0 13 1 1440.7824 Q92615 Q92615 216 228 LARP4B La-related protein 4B yes yes 2 0.0078973 115.33 By MS/MS 4 0 1 1 1155400 1155400 0 12478 2063 13244 31772 25389 25389 1 108740 0 SLPSAVYCIEDK ETTVQKVARVKAPNKSLPSAVYCIEDKMAI PNKSLPSAVYCIEDKMAIDDKYSRREEYRG K S L D K M 1 0 0 1 1 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 0 0 12 0 1380.6595 O43290 O43290 667 678 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 2 0.006598 98.898 By MS/MS 4 0 1 1 984310 984310 0 12479 201 13245 31773 25390 25390 1 92630 0 SLPSVETLGCTSVICSDK ALGTRRMAKKNAIVRSLPSVETLGCTSVIC SVETLGCTSVICSDKTGTLTTNQMSVCRMF R S L D K T 0 0 0 1 2 0 1 1 0 1 2 1 0 0 1 4 2 0 0 2 0 0 18 0 1951.9231 P16615;O14983;Q93084 P16615 335 352 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 4.3325E-12 246.64 By MS/MS 3 1.58 1 1 1 1 4 4513900 4513900 0 12480 635 13246 31774;31775;31776;31777 25391;25392;25393 25393 3 603870 0 SLPTTVPESPNYR ANKLFGAPEPSTIARSLPTTVPESPNYRNT ARSLPTTVPESPNYRNTRTPRTPRTPQLKD R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 Q6PKG0 Q6PKG0 766 778 LARP1 La-related protein 1 yes yes 2 0.021782 83.883 By MS/MS 3 0 1 1 1237800 1237800 0 12481 1722 13247 31778 25394 25394 1 22648 0 SLPVEEQPK LAKWKTAEEVAALIRSLPVEEQPKQIIVTR VAALIRSLPVEEQPKQIIVTRKGMLDPLEV R S L P K Q 0 0 0 0 0 1 2 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 9 0 1025.5393 Q6P2Q9 Q6P2Q9 1851 1859 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.05476 73.233 By MS/MS By matching 2 0 2 1 1 1675900 1630400 45514 12482 1708 13248 31779;31780 25395 25395 1 551460 64366 SLPVEEQPKQIIVTR LAKWKTAEEVAALIRSLPVEEQPKQIIVTR SLPVEEQPKQIIVTRKGMLDPLEVHLLDFP R S L T R K 0 1 0 0 0 2 2 0 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 1 1735.9832 Q6P2Q9 Q6P2Q9 1851 1865 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0029063 159.66 By MS/MS 2 0 1 1 565550 565550 0 12483 1708 13249 31781 25396 25396 1 191290 0 SLPYLPADIGNAEGEPVVPER LLPLYFPRSLKEENRSLPYLPADIGNAEGE ADIGNAEGEPVVPERQIRISEKPGAPEDNQ R S L E R Q 2 1 1 1 0 0 3 2 0 1 2 0 0 0 4 1 0 0 1 2 0 0 21 0 2222.1219 Q9NXN4 Q9NXN4 233 253 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 2 4.4482E-06 182.57 By MS/MS 6 0 1 1 1422500 1422500 0 12484 2626 13250 31782 25397;25398 25397 2 9778.9 0 SLPYNQPGTCYTLVALPK EPTEAYEVLCYVPARSLPYNQPGTCYTLVA YNQPGTCYTLVALPKEDPTAVACTFSCMMK R S L P K E 1 0 1 0 1 1 0 1 0 0 3 1 0 0 3 1 2 0 2 1 0 0 18 0 2021.0292 Q9Y678 Q9Y678 697 714 COPG1 Coatomer subunit gamma-1 yes yes 2 0.00024532 131.08 By MS/MS 4 0 1 1 1046500 1046500 0 12485 2933 13251 31783 25399 25399 1 98479 0 SLQALGEVIEAELR AELGMEHQAVVGAVKSLQALGEVIEAELRS KSLQALGEVIEAELRSTKHWELTAEGEEIA K S L L R S 2 1 0 0 0 1 3 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 14 0 1526.8304 Q9Y285 Q9Y285 43 56 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 4.025E-05 215.34 By MS/MS 6 0 1 1 305140 305140 0 12486 2819 13252 31784 25400 25400 1 2097.6 0 SLQAQLQR CLDRTNVIQSLLARRSLQAQLQRLGVLHVG QSLLARRSLQAQLQRLGVLHVGQKLEEQDE R S L Q R L 1 1 0 0 0 3 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 942.52468 Q9NTJ5 Q9NTJ5 407 414 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0066583 118.74 By MS/MS 1.5 0.5 1 1 2 1578500 1578500 0 12487 2576 13253 31785;31786 25401;25402 25402 2 452170 0 SLQEMFSGTR FVWEASHYLVRQVFKSLQEMFSGTRAIQHW RQVFKSLQEMFSGTRAIQHWLTESARLISH K S L T R A 0 1 0 0 0 1 1 1 0 0 1 0 1 1 0 2 1 0 0 0 0 0 10 0 1154.539 O00411 O00411 1039 1048 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00087547 126.03 By MS/MS 3 0 2 2 762260 762260 0 12488 104 13254;13255 31787;31788 25403;25404 25404 68 2 13947 0 SLQERNQEQEKVER SGRAKELLGQGLLLRSLQERNQEQEKVERR RSLQERNQEQEKVERRRQVPFHLHINLELL R S L E R R 0 2 1 0 0 3 4 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 14 2 1771.8813 Q99613;B5ME19 Q99613 654 667 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.00088175 171.36 By MS/MS By MS/MS 5 1.53 1 2 1 2 4 2 6091800 6027600 64212 12489 2252 13256 31789;31790;31791;31792;31793;31794 25405;25406;25407;25408 25407 3 424290 134140 SLQETIQSLK HLLSSWEQIPKKVQKSLQETIQSLKLTNQE KKVQKSLQETIQSLKLTNQELLRKGSSNNQ K S L L K L 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1145.6292 Q6NUQ4 Q6NUQ4 435 444 TMEM214 Transmembrane protein 214 yes yes 2 0.0017799 112.83 By MS/MS 5 0 1 1 781580 781580 0 12490 1689 13257 31795 25409 25409 1 7838.8 0 SLQLASQR QSQGMMRAAEMCYRKSLQLASQRGSWSGKL AEMCYRKSLQLASQRGSWSGKLSSLLRLAL K S L Q R G 1 1 0 0 0 2 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 8 0 901.49813 Q6PGP7 Q6PGP7 1426 1433 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.041116 85.862 By MS/MS 3.5 0.5 1 1 2 501620 501620 0 12491 1716 13258 31796;31797 25410 25410 1 29631 0 SLQLTGFQAYK LVFGDMEGQIWFLPRSLQLTGFQAYKLRVT FLPRSLQLTGFQAYKLRVTHLYQLKQHNIL R S L Y K L 1 0 0 0 0 2 0 1 0 0 2 1 0 1 0 1 1 0 1 0 0 0 11 0 1254.6608 Q9H270 Q9H270 74 84 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 8.6106E-05 153.1 By MS/MS 4 0 1 1 708990 708990 0 12492 2428 13259 31798 25411 25411 1 66721 0 SLQQLQH IQLCGLIRACAEALRSLQQLQH________ RACAEALRSLQQLQH_______________ R S L Q H - 0 0 0 0 0 3 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 852.44537 O60232 O60232 193 199 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 0.0080711 143.02 By MS/MS By matching 9.33 0.471 2 1 2 1 4212000 4190100 21888 12493 250 13260 31799;31800;31801 25412 25412 1 89988 49910 SLQSVAEER GKPVHHGVNQLKFARSLQSVAEERAGRHCG QLKFARSLQSVAEERAGRHCGALRVLNSYW R S L E R A 1 1 0 0 0 1 2 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1017.5091 P61313 P61313 97 105 RPL15 60S ribosomal protein L15 yes yes 2 0.00013952 150.27 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 9788900 9532000 256940 12494 1121 13261 31802;31803;31804 25413;25414 25414 2 132410 346720 SLQYGEQVNEILCR ATKAQIVKALKAMTRSLQYGEQVNEILCRS RSLQYGEQVNEILCRSSVWSAFKDQKHDLF R S L C R S 0 1 1 0 1 2 2 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 14 0 1707.825 O75165 O75165 2169 2182 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0013144 134.56 By MS/MS 2 0 1 1 113240 113240 0 12495 302 13262 31805 25415;25416 25416 2 38302 0 SLRDTAVR TENCYKVEGKANLSRSLRDTAVRLSELGWL GKANLSRSLRDTAVRLSELGWLHNKIRRYT R S L V R L 1 2 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 1 916.50903 Q96CW5 Q96CW5 286 293 TUBGCP3 Gamma-tubulin complex component 3 yes yes 3 0.049243 71.877 By MS/MS 4 0 1 1 635100 635100 0 12496 2128 13263 31806 25417 25417 1 59767 0 SLRECELYVQK ______________________________ EEARSLRECELYVQKHNIQALLKDSIVQLC R S L Q K H 0 1 0 0 1 1 2 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 1 1423.7129 P10644 P10644 14 24 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 3 0.00084178 115 By MS/MS 6.5 0.5 1 1 2 2746100 2746100 0 12497 567 13264 31807;31808 25418 25418 1 22365 0 SLRVDIAEGR LKEALTYDGALLGDRSLRVDIAEGRKQDKG LLGDRSLRVDIAEGRKQDKGGFGFRKGGPD R S L G R K 1 2 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 10 1 1114.6095 Q15056 Q15056 110 119 EIF4H Eukaryotic translation initiation factor 4H yes yes 3 0.041319 79.07 By MS/MS 8 0 1 1 3564900 3564900 0 12498 1485 13265 31809 25419 25419 1 45007 0 SLSAERER AAVEAKVNRSTALLKSLSAERERWEKTSET RSTALLKSLSAERERWEKTSETFKNQMSTI K S L E R W 1 2 0 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 8 1 946.48321 Q14204 Q14204 3481 3488 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.012594 137.9 By MS/MS 2 0.816 1 1 1 3 2279600 2279600 0 12499 1433 13266 31810;31811;31812 25420;25421 25420 2 562740 0 SLSAIDR ITYEKCLIATGGTPRSLSAIDRAGAEVKSR IATGGTPRSLSAIDRAGAEVKSRTTLFRKI R S L D R A 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 7 0 760.40792 O95831 O95831 266 272 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.038374 98.418 By MS/MS By matching 5.75 0.829 2 1 1 3 1 8280300 8246100 34167 12500 429 13267 31813;31814;31815;31816 25422 25422 1 80594 28693 SLSAIDRAGAEVK ITYEKCLIATGGTPRSLSAIDRAGAEVKSR PRSLSAIDRAGAEVKSRTTLFRKIGDFRSL R S L V K S 3 1 0 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 1 1315.7096 O95831 O95831 266 278 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 5.2217E-05 168.83 By MS/MS 6 0.816 1 1 1 3 7620300 7620300 0 12501 429 13268 31817;31818;31819 25423;25424 25423 2 73862 0 SLSDCVNYIVQDSK FDKSKTVYEGPFASRSLSDCVNYIVQDSKI RSLSDCVNYIVQDSKIQLPIIQLRKVWAEA R S L S K I 0 0 1 2 1 1 0 0 0 1 1 1 0 0 0 3 0 0 1 2 0 0 14 0 1626.7559 O15111 O15111 402 415 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 2 6.317E-12 246.26 By MS/MS 5 0 1 1 1520600 1520600 0 12502 160 13269 31820 25425 25425 1 15251 0 SLSEAPEDTSTR GEEENGEVHQAREDKSLSEAPEDTSTRGLN EDKSLSEAPEDTSTRGLNQDSTDSKTLQEQ K S L T R G 1 1 0 1 0 0 2 0 0 0 1 0 0 0 1 3 2 0 0 0 0 0 12 0 1291.5892 P41214 P41214 237 248 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.0011103 123.11 By MS/MS 5 0 1 1 647550 647550 0 12503 867 13270 31821 25426 25426 1 6494.6 0 SLSEEIKR SGYRAQIDNLTRENRSLSEEIKRLKNTLTQ NLTRENRSLSEEIKRLKNTLTQTTENLRRV R S L K R L 0 1 0 0 0 0 2 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 8 1 960.52401 P15924 P15924 1404 1411 DSP Desmoplakin yes yes 2 0.053875 104.37 By MS/MS By matching 2 0 2 1 1 257420 203990 53433 12504 628 13271 31822;31823 25427 25427 1 68998 75565 SLSELESLKLPAESNEK TCNDLIAKHGTALQRSLSELESLKLPAESN SELESLKLPAESNEKIKQVNERATLFRITS R S L E K I 1 0 1 0 0 0 4 0 0 0 4 2 0 0 1 4 0 0 0 0 0 0 17 1 1872.968 P22059 P22059 238 254 OSBP Oxysterol-binding protein 1 yes yes 3 0.0084901 86.539 By MS/MS 4.5 0.5 1 1 2 1186200 1186200 0 12505 686 13272 31824;31825 25428 25428 1 102110 0 SLSIEIGHEVK ERLTESLRSKVTAIKSLSIEIGHEVKTQNK TAIKSLSIEIGHEVKTQNKLLAEMDSQFDS K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 O15155 O15155 48 58 BET1 BET1 homolog yes yes 2 0.00041614 133.23 By MS/MS 10 0 1 1 1312900 1312900 0 12506 165 13273 31826 25429 25429 1 70759 0 SLSLGEVLDGDR YYQLPVCCPEKIRHKSLSLGEVLDGDRMAE RHKSLSLGEVLDGDRMAESLYEIRFRENVE K S L D R M 0 1 0 2 0 0 1 2 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1259.6357 O15321 O15321 76 87 TM9SF1 Transmembrane 9 superfamily member 1 yes yes 2 0.00037378 139.15 By MS/MS 1 0 1 1 70711 70711 0 12507 182 13274 31827 25430 25430 1 17039 0 SLSNSNPDISGTPTSPDDEVR RSAVRPASLNLNRSRSLSNSNPDISGTPTS PDISGTPTSPDDEVRSIIGSKGLDRSNSWV R S L V R S 0 1 2 3 0 0 1 1 0 1 1 0 0 0 3 5 2 0 0 1 0 0 21 0 2186.9927 Q96N67 Q96N67 896 916 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 4.5304E-06 182.18 By MS/MS 2.5 0.5 1 1 2 925200 925200 0 12508 2201 13275 31828;31829 25431 25431 1 249750 0 SLSPCRAQR ______________________________ ______________________________ M S L Q R G 1 2 0 0 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 9 1 1073.54 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 2 10 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.024772 82.75 By MS/MS 2.33 1.25 1 1 1 3 245020 0 245020 + 12509 70 13276 31830;31831;31832 25432;25433 25432 2 0 338610 SLSPFAITYLDR LKVWLGIMLPVLGIKSLSPFAITYLDRLLL GIKSLSPFAITYLDRLLLMHPNLTKGFGMI K S L D R L 1 1 0 1 0 0 0 0 0 1 2 0 0 1 1 2 1 0 1 0 0 0 12 0 1381.7242 Q6NUQ4 Q6NUQ4 289 300 TMEM214 Transmembrane protein 214 yes yes 2 0.0067367 117.14 By MS/MS 5 0 1 1 0 0 0 12510 1689 13277 31833 25434 25434 1 0 0 SLSSDSTLLLFK SSEIGKAVGFLSVPKSLSSDSTLLLFKDSS VPKSLSSDSTLLLFKDSSSKMGYFPTEEKS K S L F K D 0 0 0 1 0 0 0 0 0 0 4 1 0 1 0 4 1 0 0 0 0 0 12 0 1309.7129 Q9HAW4 Q9HAW4 718 729 CLSPN Claspin yes yes 2 0.00024187 147.75 By MS/MS 2 0 1 1 51519 51519 0 12511 2497 13278 31834 25435;25436 25436 2 17426 0 SLSSPTDNLELSLR IIDILSEAKRRQQGKSLSSPTDNLELSLRS KSLSSPTDNLELSLRSQSDLDDQHDYDSVA K S L L R S 0 1 1 1 0 0 1 0 0 0 4 0 0 0 1 4 1 0 0 0 0 0 14 0 1530.789 Q9Y2X7 Q9Y2X7 359 372 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 0.00040819 140.45 By MS/MS 4.5 0.5 1 1 2 2318300 2318300 0 12512 2848 13279 31835;31836 25437 25437 1 177330 0 SLSSSLDDTEVKK ISTTASKTETPIVSKSLSSSLDDTEVKKVM SKSLSSSLDDTEVKKVMEECKRLQGEVQRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 5.2917E-05 192.44 By MS/MS 8 0 1 1 998370 998370 0 12513 401 13280 31837 25438 25438 1 12604 0 SLSTEQLFR MAFQAEQKIKADILRSLSTEQLFRLLSDSD KADILRSLSTEQLFRLLSDSDLNVLMKTLG R S L F R L 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 2 1 0 0 0 0 0 9 0 1079.5611 Q8IUR7 Q8IUR7 510 518 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.00066887 141.52 By MS/MS 5 0 1 1 1736500 1736500 0 12514 1860 13281 31838 25439 25439 1 17416 0 SLSVLSPR DTKRADVAGPRPCQRSLSVLSPRQPAQNRE GPRPCQRSLSVLSPRQPAQNRESTPLASGP R S L P R Q 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 1 0 0 8 0 857.49707 P53814 P53814 299 306 SMTN Smoothelin yes yes 2 0.031605 93.195 By MS/MS 5.5 1.12 1 1 1 1 4 10035000 10035000 0 12515 1037 13282 31839;31840;31841;31842 25440 25440 0 294550 0 SLTAEIDRLK SECSARLLQQEEEIKSLTAEIDRLKNCGCL EEEIKSLTAEIDRLKNCGCLGASPNLEQLQ K S L L K N 1 1 0 1 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 1 1144.6452 P54136 P54136 21 30 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0030325 131.62 By MS/MS 5 0 1 1 2548100 2548100 0 12516 1043 13283 31843 25441 25441 1 25556 0 SLTANPELIDR IEEGIPAFTCEEYVKSLTANPELIDRLACL EYVKSLTANPELIDRLACLSEEGNEIESGK K S L D R L 1 1 1 1 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 11 0 1227.6459 Q9Y2L1 Q9Y2L1 200 210 DIS3 Exosome complex exonuclease RRP44 yes yes 2 2.4555E-18 248.88 By MS/MS 2.5 1.12 1 1 1 1 4 4803400 4803400 0 12517 2834 13284 31844;31845;31846;31847 25442;25443 25443 2 484860 0 SLTDSCLFEK DAKEELTASLVGLPKSLTDSCLFEKSGYEE VGLPKSLTDSCLFEKSGYEEDNECHVTPEL K S L E K S 0 0 0 1 1 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1198.554 Q9UKA4 Q9UKA4 1483 1492 AKAP11 A-kinase anchor protein 11 yes yes 2 0.000196 147.4 By MS/MS 2.5 0.5 1 1 2 369180 369180 0 12518 2758 13285 31848;31849 25444 25444 1 106720 0 SLTELQELEAVYER VGGGRCSEISAELIRSLTELQELEAVYERL RSLTELQELEAVYERLCGEEKVVERELDAL R S L E R L 1 1 0 0 0 1 4 0 0 0 3 0 0 0 0 1 1 0 1 1 0 0 14 0 1678.8414 Q9H9E3 Q9H9E3 35 48 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.00013653 177.42 By MS/MS 4 0 1 1 109970 109970 0 12519 2486 13286 31850 25445 25445 1 10349 0 SLTEYLQNVEQK AACQLRISQHEAKIKSLTEYLQNVEQKKRQ KIKSLTEYLQNVEQKKRQLEESVDALSEEL K S L Q K K 0 0 1 0 0 2 2 0 0 0 2 1 0 0 0 1 1 0 1 1 0 0 12 0 1450.7304 P33176 P33176 645 656 KIF5B Kinesin-1 heavy chain yes yes 2 6.4377E-34 308.92 By MS/MS 4 0 1 1 4129800 4129800 0 12520 800 13287 31851 25446 25446 1 388640 0 SLTNDWEDHLAVK NPDDITQEEYGEFYKSLTNDWEDHLAVKHF YKSLTNDWEDHLAVKHFSVEGQLEFRALLF K S L V K H 1 0 1 2 0 0 1 0 1 0 2 1 0 0 0 1 1 1 0 1 0 0 13 0 1526.7365 P07900;P08238 P08238 307 319 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2;3 6.7391E-05 177.04 By MS/MS 4.75 0.829 4 2 2 8 38449000 38449000 0 12521 521;513 13288 31852;31853;31854;31855;31856;31857;31858;31859 25447;25448;25449;25450;25451;25452;25453 25449 7 2686200 0 SLTPLQWCR WLYIGSSKTFTSSEKSLTPLQWCRHVLDNP FTSSEKSLTPLQWCRHVLDNPTPEMEAARR K S L C R H 0 1 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 1 0 0 0 0 9 0 1159.5808 Q8ND83 Q8ND83 202 210 SLAIN1 SLAIN motif-containing protein 1 yes yes 2 0.015897 90.709 By MS/MS 5 0 1 1 507700 507700 0 12522 1956 13289 31860 25454 25454 1 5091.9 0 SLTSWTNDQGAR STYLASNSTSAPNWKSLTSWTNDQGARRKT NWKSLTSWTNDQGARRKTVFSPTLPAARSS K S L A R R 1 1 1 1 0 1 0 1 0 0 1 0 0 0 0 2 2 1 0 0 0 0 12 0 1334.6215 Q7Z2W4 Q7Z2W4 361 372 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 4.5629E-18 260.98 By MS/MS 5 0.816 1 1 1 3 4498000 4498000 0 12523 1778 13290 31861;31862;31863 25455;25456 25455 2 269210 0 SLTYEEVLQELVK KIPDSNPFDATAGYRSLTYEEVLQELVKHK YRSLTYEEVLQELVKHKELLRRKDTHIREL R S L V K H 0 0 0 0 0 1 3 0 0 0 3 1 0 0 0 1 1 0 1 2 0 0 13 0 1549.8239 Q7L804 Q7L804 450 462 RAB11FIP2 Rab11 family-interacting protein 2 yes yes 2 0.00046048 150.09 By MS/MS 6 0 1 1 0 0 0 12524 1769 13291 31864 25457 25457 1 0 0 SLTYLSILR SLVELGDLDPLASLKSLTYLSILRNPVTNK PLASLKSLTYLSILRNPVTNKKHYRLYVIY K S L L R N 0 1 0 0 0 0 0 0 0 1 3 0 0 0 0 2 1 0 1 0 0 0 9 0 1064.623 P09661 P09661 114 122 SNRPA1 U2 small nuclear ribonucleoprotein A yes yes 2 0.010244 100.02 By MS/MS 8 0 1 1 104820 104820 0 12525 541 13292 31865 25458 25458 1 1323.3 0 SLVASLAEPDFVVTDFAK GIVSQVKVPKKISFKSLVASLAEPDFVVTD ASLAEPDFVVTDFAKFSRPAQLHIGFQALH K S L A K F 3 0 0 2 0 0 1 0 0 0 2 1 0 2 1 2 1 0 0 3 0 0 18 0 1907.988 P22314 P22314 305 322 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 0.00041962 124.12 By MS/MS 4 0 1 1 68748 68748 0 12526 691 13293 31866 25459 25459 1 6469.6 0 SLVDLTAVDVPTR PVLTFLRDHTNAQFKSLVDLTAVDVPTRQN FKSLVDLTAVDVPTRQNRFEIVYNLLSLRF K S L T R Q 1 1 0 2 0 0 0 0 0 0 2 0 0 0 1 1 2 0 0 3 0 0 13 0 1384.7562 O75489 O75489 110 122 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 1.737E-11 205.56 By MS/MS 8.5 0.5 1 1 2 0 0 0 12527 330 13294 31867;31868 25460;25461 25460 2 0 0 SLVEIADTVPK AVNDSCYQNDDSVLKSLVEIADTVPKYLRP SVLKSLVEIADTVPKYLRPHLEATLQLSLK K S L P K Y 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 1 1 0 0 2 0 0 11 0 1170.6496 O00410 O00410 239 249 IPO5 Importin-5 yes yes 2 0.00017197 159.4 By MS/MS 3.5 0.5 1 1 2 202700 202700 0 12528 103 13295 31869;31870 25462;25463 25463 2 3708.8 0 SLVGATYVER VPAKEFPKLSCGEWKSLVGATYVERAQILL CGEWKSLVGATYVERAQILLERCIHPADIP K S L E R A 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 10 0 1093.5768 Q8IYQ7 Q8IYQ7 282 291 THNSL1 Threonine synthase-like 1 yes yes 2 4.9767E-05 157.34 By MS/MS 5 0 1 1 929550 929550 0 12529 1888 13296 31871 25464 25464 1 9323 0 SLVGLGGTK GGGGGGFGGGGFGSRSLVGLGGTKSISISV GGFGSRSLVGLGGTKSISISVAGGGGGFGA R S L T K S 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 830.48617 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 62 70 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0041281 112.11 By MS/MS By MS/MS 6.23 2.36 1 1 1 2 2 2 2 2 6 7 102700000 52071000 50629000 + 12530 55 13297 31872;31873;31874;31875;31876;31877;31878;31879;31880;31881;31882;31883;31884 25465;25466;25467;25468;25469;25470;25471;25472;25473;25474;25475 25474 9 3404600 77895000 SLVIPEKFQHILR ______________________________ ______________________________ M S L L R V 0 1 0 0 0 1 1 0 1 2 2 1 0 1 1 1 0 0 0 1 0 0 13 1 1578.9246 P62269 P62269 2 14 RPS18 40S ribosomal protein S18 yes yes 2;3 0.00068579 131.42 By MS/MS 9.5 0.5 2 2 4 3308600 3308600 0 12531 1149 13298 31885;31886;31887;31888 25476;25477;25478;25479 25477 4 83342 0 SLVNIVK IGDLACANIQHLSSRSLVNIVKMFRFTHVD NIQHLSSRSLVNIVKMFRFTHVDHINFMKQ R S L V K M 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 7 0 771.48544 Q7L8L6 Q7L8L6 355 361 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.016101 119.56 By MS/MS 5 0 1 1 1606100 1606100 0 12532 1771 13299 31889 25480 25480 1 16109 0 SLVNLGGSK GGGGSFGAGGGFGSRSLVNLGGSKSISISV GGFGSRSLVNLGGSKSISISVARGGGRGSG R S L S K S 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 873.49198 CON__P04264;P04264 P04264 66 74 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.042219 92.239 By matching By MS/MS 5.2 1.72 1 1 1 1 1 3 2 360530000 148410000 212110000 + 12533 471;45 13300 31890;31891;31892;31893;31894 25481;25482 25481 2 7773500 26999000 SLVNLGGSKSISISVAR GGGGSFGAGGGFGSRSLVNLGGSKSISISV VNLGGSKSISISVARGGGRGSGFGGGYGGG R S L A R G 1 1 1 0 0 0 0 2 0 2 2 1 0 0 0 5 0 0 0 2 0 0 17 1 1686.9628 CON__P04264;P04264 P04264 66 82 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 4.216E-05 146.59 By matching By MS/MS 2.83 2.79 2 3 1 1 5 562560 100220 462340 + 12534 471;45 13301 31895;31896;31897;31898;31899;31900 25483;25484;25485;25486 25486 4 33897 610910 SLVSGLIR IYCSRSKADYTSHLRSLVSGLIRLFNDSSP DYTSHLRSLVSGLIRLFNDSSPVVLEESWD R S L I R L 0 1 0 0 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 1 0 0 8 0 843.5178 Q92616 Q92616 2192 2199 GCN1L1 Translational activator GCN1 yes yes 2 0.025808 93.195 By MS/MS 2 0.816 1 1 1 3 2248000 2248000 0 12535 2064 13302 31901;31902;31903 25487 25487 1 675970 0 SLYDEVAAQGEVVR QNISSNSSASILESKSLYDEVAAQGEVVRK KSLYDEVAAQGEVVRKLKAEKSPKAKINEA K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 P07814 P07814 825 838 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.6342E-11 242.97 By MS/MS 3 1.41 1 1 1 1 1 5 7352500 7352500 0 12536 512 13303 31904;31905;31906;31907;31908 25488;25489;25490 25489 3 516650 0 SLYDEVAAQGEVVRK QNISSNSSASILESKSLYDEVAAQGEVVRK SLYDEVAAQGEVVRKLKAEKSPKAKINEAV K S L R K L 2 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 3 0 0 15 1 1662.8577 P07814 P07814 825 839 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.0861E-06 209.67 By MS/MS 3.5 0.5 1 1 2 1705000 1705000 0 12537 512 13304 31909;31910 25491;25492 25492 2 129160 0 SLYGLGGSKR GGLGGACGGAGFGSRSLYGLGGSKRISIGG GFGSRSLYGLGGSKRISIGGGSCAISGGYG R S L K R I 0 1 0 0 0 0 0 3 0 0 2 1 0 0 0 2 0 0 1 0 0 0 10 1 1036.5665 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 60 69 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 0.0065832 111.46 By matching By MS/MS 5.33 3.2 1 2 1 1 1 1 1 1 3 6 26182000 2982300 23200000 + 12538 44;56;40 13305 31911;31912;31913;31914;31915;31916;31917;31918;31919 25493;25494;25495;25496;25497 25495 5 205260 30006000 SLYNLGGSK VSLAGACGVGGYGSRSLYNLGGSKRISIST GGYGSRSLYNLGGSKRISISTSGGSFRNRF R S L S K R 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 937.4869 CON__P13647;P13647 CON__P13647 64 72 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0090797 106.2 By MS/MS By MS/MS 3.9 2.07 1 2 2 2 2 1 4 6 13644000 7217000 6426800 + 12539 52 13306 31920;31921;31922;31923;31924;31925;31926;31927;31928;31929 25498;25499;25500;25501;25502;25503 25502 6 529480 2773400 SLYNLGGSKR VSLAGACGVGGYGSRSLYNLGGSKRISIST GYGSRSLYNLGGSKRISISTSGGSFRNRFG R S L K R I 0 1 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 10 1 1093.588 CON__P13647;P13647 CON__P13647 64 73 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0029222 125.71 By MS/MS By MS/MS 3.33 0.471 2 1 1 2 13051000 958460 12092000 + 12540 52 13307 31930;31931;31932 25504;25505;25506 25504 3 17537 2817700 SLYPSLEDLKVDK ______________________________ ______________________________ M S L D K V 0 0 0 2 0 0 1 0 0 0 3 2 0 0 1 2 0 0 1 1 0 0 13 1 1505.7977 O00560 O00560 2 14 SDCBP Syntenin-1 yes yes 2 0.00033526 147.62 By MS/MS 8 0 1 1 1618200 1618200 0 12541 114 13308 31933 25507 25507 1 20430 0 SLYQSAGVAPESFEYIEAHGTGTK GVTFPSGDIQEQLIRSLYQSAGVAPESFEY PESFEYIEAHGTGTKVGDPQELNGITRALC R S L T K V 3 0 0 0 0 1 3 3 1 1 1 1 0 1 1 3 2 0 2 1 0 0 24 0 2541.2023 P49327 P49327 275 298 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 2.6515E-07 115.83 By MS/MS 4 2.55 1 1 1 1 4 3804500 3804500 0 12542 946 13309 31934;31935;31936;31937 25508;25509 25508 2 567400 0 SLYSDHELR QEEMASLLQQIEIERSLYSDHELRALDENQ QIEIERSLYSDHELRALDENQRLAKKKADL R S L L R A 0 1 0 1 0 0 1 0 1 0 2 0 0 0 0 2 0 0 1 0 0 0 9 0 1118.5356 Q9H2W6 Q9H2W6 82 90 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 0.034283 82.749 By MS/MS By matching 8 0 2 1 1 2970300 2894900 75363 12543 2435 13310 31938;31939 25510 25510 1 36548 101700 SLYSEKEVFIR EFQAETKKLLDIVARSLYSEKEVFIRELIS IVARSLYSEKEVFIRELISNASDALEKLRH R S L I R E 0 1 0 0 0 0 2 0 0 1 1 1 0 1 0 2 0 0 1 1 0 0 11 1 1369.7242 Q12931 Q12931 104 114 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.013657 111.5 By MS/MS 5 0 1 1 4738000 4738000 0 12544 1340 13311 31940 25511 25511 1 47520 0 SMAASGNLGHTPFVDEL ADIINAAKKFVSGQKSMAASGNLGHTPFVD AASGNLGHTPFVDEL_______________ K S M E L - 2 0 1 1 0 0 1 2 1 0 2 0 1 1 1 2 1 0 0 1 0 0 17 0 1744.809 P22695 P22695 437 453 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 5.539E-11 249.69 By MS/MS 7 0 2 2 1181900 1181900 0 12545 696 13312;13313 31941;31942 25512;25513 25513 347 2 18553 0 SMDKLKEK ETVRLMDLLGEGLKRSMDKLKEKERDKVLT LGEGLKRSMDKLKEKERDKVLTAEELNAAQ R S M E K E 0 0 0 1 0 0 1 0 0 0 1 3 1 0 0 1 0 0 0 0 0 0 8 2 977.52157 P54136 P54136 473 480 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.034726 127.46 By MS/MS 5 0 1 1 284880 284880 0 12546 1043 13314 31943 25514 25514 1 2857.2 0 SMEEDPQTSR GCLKGLSSLLCNFTKSMEEDPQTSREIFNF CNFTKSMEEDPQTSREIFNFVLKAIRPQID K S M S R E 0 1 0 1 0 1 2 0 0 0 0 0 1 0 1 2 1 0 0 0 0 0 10 0 1178.4874 P78527 P78527 237 246 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0003892 135.43 By MS/MS 2 0 2 2 779060 779060 0 12547 1225 13315;13316 31944;31945 25515;25516 25516 733 2 263510 0 SMEVSTQLAR DKAFKHVFGKTLICRSMEVSTQLARAFTMD TLICRSMEVSTQLARAFTMDCITLEGDQVS R S M A R A 1 1 0 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 1 0 0 10 0 1120.5547 Q9UQE7 Q9UQE7 635 644 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00015389 150.27 By MS/MS 2.5 0.5 1 1 2 570470 570470 0 12548 2807 13317 31946;31947 25517 25517 1 29980 0 SMFAGVPTMR GGLLLLLAESRSEGKSMFAGVPTMRESSPK RSEGKSMFAGVPTMRESSPKQYMQLGGRVL K S M M R E 1 1 0 0 0 0 0 1 0 0 0 0 2 1 1 1 1 0 0 1 0 0 10 0 1095.5205 O15260 O15260 140 149 SURF4 Surfeit locus protein 4 yes yes 2 0.0040243 98.033 By MS/MS 1 0 1 1 482470 482470 0 12549 176 13318 31948 25518 25518 91;92 1 116260 0 SMIEISR NAILREIQVQHPAAKSMIEISRTQDEEVGD QVQHPAAKSMIEISRTQDEEVGDGTTSVII K S M S R T 0 1 0 0 0 0 1 0 0 2 0 0 1 0 0 2 0 0 0 0 0 0 7 0 834.42694 P49368 P49368 79 85 CCT3 T-complex protein 1 subunit gamma yes yes 1 0.043898 118.01 By MS/MS 5.5 0.5 1 1 2 2353500 2353500 0 12550 947 13319 31949;31950 25519 25519 0 17925 0 SMIEQLIK FYSVVVSTVSGNELKSMIEQLIKTTKDNHS VSGNELKSMIEQLIKTTKDNHSPEIQHGSL K S M I K T 0 0 0 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 8 0 960.5314 Q5VYK3 Q5VYK3 731 738 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00098488 153.04 By MS/MS 2 0 1 1 406600 406600 0 12551 1656 13320 31951 25520 25520 1 137530 0 SMITFMDDLNMPAK VEKRTKGVYVPFGGKSMITFMDDLNMPAKD KSMITFMDDLNMPAKDMFGSQPPLELIRLW K S M A K D 1 0 1 2 0 0 0 0 0 1 1 1 3 1 1 1 1 0 0 0 0 0 14 0 1612.7299 Q9P225 Q9P225 2477 2490 DNAH2 Dynein heavy chain 2, axonemal yes yes 2 0.039138 42.743 By MS/MS 5 0 1 1 436410 436410 0 12552 2675 13321 31952 25521 25521 1138;1139;1140 1 4377 0 SMPIRKDDEVQVVR SSPLSKELRQKYNVRSMPIRKDDEVQVVRG RSMPIRKDDEVQVVRGHYKGQQIGKVVQVY R S M V R G 0 2 0 2 0 1 1 0 0 1 0 1 1 0 1 1 0 0 0 3 0 0 14 2 1670.8774 P61254;Q9UNX3 P61254 46 59 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 3;4 0.035675 104.94 By MS/MS 9 0 3 3 4642100 4642100 0 12553 1119;2794 13322;13323 31953;31954;31955 25522;25523;25524 25524 637 3 91357 0 SMSFQGIR IEPHTGLLLLSVQKRSMSFQGIRQPVTVTE LLSVQKRSMSFQGIRQPVTVTELVDSGILR R S M I R Q 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 924.44874 P15924 P15924 2207 2214 DSP Desmoplakin yes yes 2 0.028679 90.37 By MS/MS 2 0 1 1 227630 227630 0 12554 628 13324 31956 25525 25525 1 76995 0 SMSIDDTPR DGNSYQDDQDDLKRRSMSIDDTPRGSWACS DDLKRRSMSIDDTPRGSWACSIFDLKNSLP R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0005505 145.16 By MS/MS 2 0 1 1 270780 270780 0 12555 2201 13325 31957 25526 25526 1 91589 0 SMSVYCTPNKPSR LMKKEFTLEFSRDRKSMSVYCTPNKPSRTS RKSMSVYCTPNKPSRTSMSKMFVKGAPEGV K S M S R T 0 1 1 0 1 0 0 0 0 0 0 1 1 0 2 3 1 0 1 1 0 0 13 1 1525.7017 P16615 P16615 493 505 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.04413 67.252 By MS/MS 3 1.41 1 1 1 1 1 5 2742000 2742000 0 12556 635 13326 31958;31959;31960;31961;31962 25527 25527 313 1 521680 0 SMVEDITGLR PKTKLKISYKDAINRSMVEDITGLRLLEAA DAINRSMVEDITGLRLLEAASVSSKGLPSP R S M L R L 0 1 0 1 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 10 0 1119.5594 P15924 P15924 2792 2801 DSP Desmoplakin yes yes 2 0.038294 82.749 By MS/MS 10 0 1 1 0 0 0 12557 628 13327 31963 25528 25528 305 1 0 0 SNAAGVPCDLVTGEER YCGPLKLLAHEIFEKSNAAGVPCDLVTGEE NAAGVPCDLVTGEERVTVQPNGKQASHVSC K S N E R V 2 1 1 1 1 0 2 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 16 0 1673.7679 Q8IYB8 Q8IYB8 244 259 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.0035672 99.834 By MS/MS 5 0 1 1 1099900 1099900 0 12558 1885 13328 31964 25529 25529 1 11031 0 SNADYQYQLLR TEFPGVVARPIGEFRSNADYQYQLLRCNVD GEFRSNADYQYQLLRCNVDLLKIIQLGLTF R S N L R C 1 1 1 1 0 2 0 0 0 0 2 0 0 0 0 1 0 0 2 0 0 0 11 0 1369.6626 Q9UIV1 Q9UIV1 56 66 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 2 0.0065626 99.788 By MS/MS 8 0 1 1 1582400 1582400 0 12559 2744 13329 31965 25530 25530 1 19978 0 SNAETATDLVVLDR EELEEKIQKLEKILKSNAETATDLVVLDRY KSNAETATDLVVLDRYTSQPCEIVVDCGPF K S N D R Y 2 1 1 2 0 0 1 0 0 0 2 0 0 0 0 1 2 0 0 2 0 0 14 0 1502.7577 Q9UPY3 Q9UPY3 232 245 DICER1 Endoribonuclease Dicer yes yes 2 8.4053E-24 276.12 By MS/MS 2.5 0.5 1 1 2 363970 363970 0 12560 2803 13330 31966;31967 25531 25531 1 99170 0 SNAQRQDIAFAYQR KGVDEVTIVNILTNRSNAQRQDIAFAYQRR RSNAQRQDIAFAYQRRTKKELASALKSALS R S N Q R R 3 2 1 1 0 3 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 14 1 1666.8176 P07355 P07355 64 77 ANXA2 Annexin A2 yes yes 3 0.00059971 133.04 By MS/MS 3 0 1 1 336680 0 336680 12561 508 13331 31968 25532;25533 25533 2 0 42854 SNCVLEAFGNAK SQRAEVERVKNMLLKSNCVLEAFGNAKTNR LLKSNCVLEAFGNAKTNRNDNSSRFGKYMD K S N A K T 2 0 2 0 1 0 1 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 12 0 1308.6132 O94832 O94832 141 152 MYO1D Unconventional myosin-Id yes yes 2 7.1466E-05 160.72 By MS/MS 4 0 1 1 693620 693620 0 12562 371 13332 31969 25534 25534 1 65274 0 SNEILTAIIQGMR GYICQDIDPEQLQDKSNEILTAIIQGMRKE DKSNEILTAIIQGMRKEEPSNNVKLAATNA K S N M R K 1 1 1 0 0 1 1 1 0 3 1 0 1 0 0 1 1 0 0 0 0 0 13 0 1444.7708 Q14974 Q14974 170 182 KPNB1 Importin subunit beta-1 yes yes 2 0.00011372 171.67 By MS/MS 4 0 1 1 274840 274840 0 12563 1462 13333 31970 25535 25535 859 1 25864 0 SNELGDVGVHCVLQGLQTPSCK SALRVNPALAELNLRSNELGDVGVHCVLQG GVHCVLQGLQTPSCKIQKLSLQNCCLTGAG R S N C K I 0 0 1 1 2 2 1 3 1 0 3 1 0 0 1 2 1 0 0 3 0 0 22 0 2397.1417 P13489 P13489 65 86 RNH1 Ribonuclease inhibitor yes yes 3 8.9429E-06 160.67 By MS/MS 7 0 1 1 706060 706060 0 12564 601 13334 31971 25536 25536 1 11084 0 SNELWTEIK RTAHSLFKRYRHEFKSNELWTEIKLVLDAF YRHEFKSNELWTEIKLVLDAFALPLTNLFK K S N I K L 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 9 0 1118.5608 P55060 P55060 166 174 CSE1L Exportin-2 yes yes 2 8.7289E-07 182.39 By MS/MS 4 0 1 1 939610 939610 0 12565 1053 13335 31972 25537 25537 1 88424 0 SNFGYNIPLK RSLADIAREEASNFRSNFGYNIPLKHLADR ASNFRSNFGYNIPLKHLADRVAMYVHAYTL R S N L K H 0 0 2 0 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 0 10 0 1151.5975 P25788 P25788 101 110 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.0003484 137.05 By MS/MS 8 0 1 1 3782600 3782600 0 12566 726 13336 31973 25538;25539 25539 2 47755 0 SNFSNSADDIK ENNKPREKSESNKRKSNFSNSADDIKSKKK NKRKSNFSNSADDIKSKKKREQSNDIARGF K S N I K S 1 0 2 2 0 0 0 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 11 0 1196.5309 P45973 P45973 92 102 CBX5 Chromobox protein homolog 5 yes yes 2 1.1854E-09 220.82 By MS/MS 9 0 1 1 706620 706620 0 12567 905 13337 31974 25540 25540 1 13906 0 SNGVQLLQR VVLAREDAGAEKIFRSNGVQLLQRLLDMGE AEKIFRSNGVQLLQRLLDMGETDLMLAALR R S N Q R L 0 1 1 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5618 Q9H3U1 Q9H3U1 194 202 UNC45A Protein unc-45 homolog A yes yes 2 0.00066887 141.52 By MS/MS 4 0 1 1 989580 989580 0 12568 2442 13338 31975 25541 25541 1 93126 0 SNIGTEGGPPPFVPFGQK IEKWELQRSLSKHNRSNIGTEGGPPPFVPF GTEGGPPPFVPFGQKCVSHVQVDSRELDRR R S N Q K C 0 0 1 0 0 1 1 4 0 1 0 1 0 2 4 1 1 0 0 1 0 0 18 0 1827.9155 Q9H7E2 Q9H7E2 80 97 TDRD3 Tudor domain-containing protein 3 yes yes 2 0.00063854 115.37 By MS/MS 4 0 1 1 342180 342180 0 12569 2462 13339 31976 25542 25542 1 32202 0 SNILLLGPTGSGK GEVLDSSHDDIKLEKSNILLLGPTGSGKTL EKSNILLLGPTGSGKTLLAQTLAKCLDVPF K S N G K T 0 0 1 0 0 0 0 3 0 1 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1255.7136 O76031 O76031 287 299 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00036297 145.81 By MS/MS 5.5 0.5 1 1 2 6852400 6852400 0 12570 360 13340 31977;31978 25543;25544 25543 2 64060 0 SNKEIMEHIR YLDSGEQVLVDVETKSNKEIMEHIRKILGK DVETKSNKEIMEHIRKILGKNEETLREEEE K S N I R K 0 1 1 0 0 0 2 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 10 1 1255.6343 P82663 P82663 94 103 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2;3 0.00014213 178.54 By MS/MS 9 0 2 2 2617200 2617200 0 12571 1230 13341 31979;31980 25545;25546 25545 2 51507 0 SNKPIILR SKKIVQLKPRNPDYRSNKPIILRALCDYKQ PRNPDYRSNKPIILRALCDYKQDQKIVHKG R S N L R A 0 1 1 0 0 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 8 1 939.58655 P15924 P15924 457 464 DSP Desmoplakin yes yes 3 0.0040862 118.74 By MS/MS By MS/MS 3 0.707 1 2 1 3 1 1258800 535130 723630 12572 628 13342 31981;31982;31983;31984 25547;25548;25549 25548 3 87196 92107 SNKQNLFLGSLTSR RLEQEEQQRLAELSKSNKQNLFLGSLTSRL KSNKQNLFLGSLTSRLWPRSKQP_______ K S N S R L 0 1 2 0 0 1 0 1 0 0 3 1 0 1 0 3 1 0 0 0 0 0 14 1 1563.8369 Q3ZCQ8 Q3ZCQ8 332 345 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 3.1563E-05 201.48 By MS/MS 8 1.1 2 2 1 5 9834700 9834700 0 12573 1580 13343 31985;31986;31987;31988;31989 25550;25551;25552 25551 3 167330 0 SNLCALCIGDEQGENK DEYFSQSCAPGSDPRSNLCALCIGDEQGEN NLCALCIGDEQGENKCVPNSNERYYGYTGA R S N N K C 1 0 2 1 2 1 2 2 0 1 2 1 0 0 0 1 0 0 0 0 0 0 16 0 1806.7876 P02788 P02788 520 535 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 6.7615E-54 348.58 By MS/MS 3 1.58 1 1 1 1 4 592710 0 592710 12574 459 13344 31990;31991;31992;31993 25553;25554;25555 25554 3 0 677290 SNLGSVVLQLK YKTEMQDNTYPEILRSNLGSVVLQLKKLGI EILRSNLGSVVLQLKKLGIDDLVHFDFMDP R S N L K K 0 0 1 0 0 1 0 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 11 0 1156.6816 O43143 O43143 505 515 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 2.252E-05 161.51 By MS/MS 4 0 1 1 912410 912410 0 12575 190 13345 31994 25556 25556 1 85864 0 SNLPDNLKK DMAIFITMNPGYAGRSNLPDNLKKLFRSLA PGYAGRSNLPDNLKKLFRSLAMTKPDRQLI R S N K K L 0 0 2 1 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 1027.5662 Q14204 Q14204 2026 2034 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.031386 101.9 By MS/MS By matching 1.75 0.829 2 1 1 3 1 1987300 1967800 19439 12576 1433 13346 31995;31996;31997;31998 25557 25557 1 526990 19439 SNLQVSNEPGNR YLKTRSPVTFLSDLRSNLQVSNEPGNRYNL DLRSNLQVSNEPGNRYNLQLINALVLYVGT R S N N R Y 0 1 3 0 0 1 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 12 0 1313.6324 A5YKK6 A5YKK6 2198 2209 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 8.3817E-05 158.06 By MS/MS 2 0 1 1 450500 450500 0 12577 19 13347 31999 25558 25558 1 152380 0 SNLYIAESTSGR EAQDMAVRDHNVEFRSNLYIAESTSGRGQC EFRSNLYIAESTSGRGQCLKRIRYHGRGRF R S N G R G 1 1 1 0 0 0 1 1 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1296.631 Q9NWU5 Q9NWU5 132 143 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 4.4505E-05 187.58 By MS/MS 9 0 1 1 10415000 10415000 0 12578 2614 13348 32000 25559 25559 1 204980 0 SNMGHPEPASGLAALAK LCATRQEPLLIGSTKSNMGHPEPASGLAAL MGHPEPASGLAALAKVLLSLEHGLWAPNLH K S N A K V 4 0 1 0 0 0 1 2 1 0 2 1 1 0 2 2 0 0 0 0 0 0 17 0 1649.8195 P49327 P49327 327 343 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00015182 179.55 By MS/MS 2.44 0.831 1 4 3 1 9 5705800 5705800 0 12579 946 13349;13350 32001;32002;32003;32004;32005;32006;32007;32008;32009 25560;25561;25562;25563;25564;25565 25564 512 6 1603900 0 SNNIINETTTR KDKEKVEEFKSIPAKSNNIINETTTRNNAL IPAKSNNIINETTTRNNALEKEKEKEEKKL K S N T R N 0 1 3 0 0 0 1 0 0 2 0 0 0 0 0 1 3 0 0 0 0 0 11 0 1261.6262 Q9NTJ3 Q9NTJ3 435 445 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 8.7057E-07 192.44 By MS/MS 2 0.816 1 1 1 3 1907900 1907900 0 12580 2575 13351 32010;32011;32012 25566 25566 1 68585 0 SNPDQPAVILLLR GRISEAETLCTKNLKSNPDQPAVILLLRQV LKSNPDQPAVILLLRQVQCKPLLESQKPLP K S N L R Q 1 1 1 1 0 1 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 0 13 0 1434.8195 Q6PGP7 Q6PGP7 1355 1367 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00037079 166.29 By MS/MS 5.4 1.85 1 1 1 1 1 5 1025600 1025600 0 12581 1716 13352 32013;32014;32015;32016;32017 25567;25568;25569;25570;25571;25572 25568 6 35220 0 SNPSAVAGNETPGASTK NKEESYDFSKSYEYKSNPSAVAGNETPGAS PSAVAGNETPGASTKGYPPPVAAKPTFGRS K S N T K G 3 0 2 0 0 0 1 2 0 0 0 1 0 0 2 3 2 0 0 1 0 0 17 0 1586.7536 Q9UDY2 Q9UDY2 1017 1033 TJP2 Tight junction protein ZO-2 yes yes 2 5.5658E-05 233.28 By MS/MS 3 0 1 1 680420 680420 0 12582 2712 13353 32018 25573 25573 1 12450 0 SNPSVFVIFQK YTSPPPQFDSCVDTRSNPSVFVIFQKDQVY VDTRSNPSVFVIFQKDQVYPQYVIEYTEDK R S N Q K D 0 0 1 0 0 1 0 0 0 1 0 1 0 2 1 2 0 0 0 2 0 0 11 0 1264.6816 Q7Z2W4 Q7Z2W4 872 882 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0088141 94.409 By MS/MS 5.5 1.5 1 1 2 1257100 1257100 0 12583 1778 13354 32019;32020 25574;25575;25576 25575 3 107630 0 SNQQLVDIIEK FQGTKVFVMPNGMLKSNQQLVDIIEKVKPE GMLKSNQQLVDIIEKVKPEIRLLIEKCNTV K S N E K V 0 0 1 1 0 2 1 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1285.6878 P61289 P61289 111 121 PSME3 Proteasome activator complex subunit 3 yes yes 2 8.6313E-10 222.18 By MS/MS 8 0 1 1 6468700 6468700 0 12584 1120 13355 32021 25577 25577 1 81667 0 SNSEDKLNSK QNACILESVSEKTERSNSEDKLNSKILNEK EKTERSNSEDKLNSKILNEKPTTDEPEKAV R S N S K I 0 0 2 1 0 0 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 10 1 1120.536 Q9H2G2 Q9H2G2 370 379 SLK STE20-like serine/threonine-protein kinase yes yes 2 6.4976E-07 188.91 By MS/MS 2 0 1 1 341520 341520 0 12585 2429 13356 32022 25578 25578 1 115520 0 SNSFVYLEPLPR EHQDAYHSANLVFSRSNSFVYLEPLPRELP FSRSNSFVYLEPLPRELPCGKTQTVQAHYV R S N P R E 0 1 1 0 0 0 1 0 0 0 2 0 0 1 2 2 0 0 1 1 0 0 12 0 1420.7351 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 455 466 yes yes 2 0.0090903 108.7 By MS/MS 1.5 0.5 1 1 2 180460 180460 0 + 12586 32 13357 32023;32024 25579;25580 25579 2 53643 0 SNSLAFIK FISYNINIDIHYGVKSNSLAFIKRTPVIDA DIHYGVKSNSLAFIKRTPVIDADKPVSSQL K S N I K R 1 0 1 0 0 0 0 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 8 0 878.48617 Q14204 Q14204 113 120 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00032606 163.99 By MS/MS 2 0.816 1 1 1 3 931660 931660 0 12587 1433 13358 32025;32026;32027 25581;25582 25582 2 233530 0 SNTLPISLQSIR EAANGNLDFVLSFLKSNTLPISLQSIRSSL FLKSNTLPISLQSIRSSLLLGFRRSMNINL K S N I R S 0 1 1 0 0 1 0 0 0 2 2 0 0 0 1 3 1 0 0 0 0 0 12 0 1327.746 P42704 P42704 530 541 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.3678E-06 199.12 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 6 1 12241000 12077000 164240 12588 886 13359 32028;32029;32030;32031;32032;32033;32034 25583;25584;25585;25586;25587;25588;25589 25586 7 736100 20906 SNTSLLQQNLR KLTQNVDLLGLLKWRSNTSLLQQNLRQLMK LKWRSNTSLLQQNLRQLMKVDGGEVVKFLQ R S N L R Q 0 1 2 0 0 2 0 0 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1272.6786 Q14185 Q14185 627 637 DOCK1 Dedicator of cytokinesis protein 1 yes yes 2 2.2275E-18 250.92 By MS/MS 2.5 0.5 1 1 2 379530 379530 0 12589 1429 13360 32035;32036 25590 25590 1 89696 0 SNTVVGNENEER DGLHQALLSVGVSKRSNTVVGNENEERGTP SKRSNTVVGNENEERGTPYASRFKDMPNFI R S N E R G 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 12 0 1346.6062 Q6P2I7 Q6P2I7 149 160 EBLN2 Endogenous Bornavirus-like nucleoprotein 2 yes yes 2 0.010768 90.149 By MS/MS 7 0 1 1 1769400 1769400 0 12590 1707 13361 32037 25591 25591 1 27776 0 SNVQPTAAPGQK RKEPVTPSALVLMSRSNVQPTAAPGQKVME MSRSNVQPTAAPGQKVMENSSGTPDILTRH R S N Q K V 2 0 1 0 0 2 0 1 0 0 0 1 0 0 2 1 1 0 0 1 0 0 12 0 1196.6149 Q96GD4 Q96GD4 45 56 AURKB Aurora kinase B yes yes 2 0.0084257 93.561 By MS/MS 7 0 1 1 586330 586330 0 12591 2160 13362 32038 25592 25592 1 9204.3 0 SNVSDAVAQSTR QQAQEVHEKLRGWLKSNVSDAVAQSTRIIY WLKSNVSDAVAQSTRIIYGGSVTGATCKEL K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 195 206 TPI1 Triosephosphate isomerase yes yes 2 4.9751E-06 187.78 By MS/MS 8 0 1 1 824140 824140 0 12592 1089 13363 32039 25593 25593 1 10405 0 SNYEAMIDR GNAPEGLPQLMEVVRSNYEAMIDRAHGGPN LMEVVRSNYEAMIDRAHGGPNFMMHSGISQ R S N D R A 1 1 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 9 0 1097.4812 A5YKK6 A5YKK6 1815 1823 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.014519 91.658 By MS/MS 2 0 1 1 118690 118690 0 12593 19 13364 32040 25594 25594 4 1 40145 0 SPACDPTVGVDFFSR CLLHRFTQGRFPGLRSPACDPTVGVDFFSR SPACDPTVGVDFFSRLLEIEPGKRIKLQLW R S P S R L 1 1 0 2 1 0 0 1 0 0 0 0 0 2 2 2 1 0 0 2 0 0 15 0 1653.7457 Q14964 Q14964 38 52 RAB39A Ras-related protein Rab-39A yes yes 2 0.00020616 190.66 By MS/MS 8.5 0.5 1 1 2 1528800 1528800 0 12594 1461 13365 32041;32042 25595;25596 25596 2 28564 0 SPAFVQLAPLSSK GPLLGPSMAREPGGRSPAFVQLAPLSSKVR GRSPAFVQLAPLSSKVRLSSPSIKDLPAGR R S P S K V 2 0 0 0 0 1 0 0 0 0 2 1 0 1 2 3 0 0 0 1 0 0 13 0 1343.7449 P51610 P51610 1205 1217 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 2 0.0030543 109.39 By MS/MS 9 0 1 1 153270 153270 0 12595 1000 13366 32043 25597 25597 1 3016.3 0 SPAGLQVLNDYLADK ______________________________ SPAGLQVLNDYLADKSYIEGYVPSQADVAV K S P D K S 2 0 1 2 0 1 0 1 0 0 3 1 0 0 1 1 0 0 1 1 0 0 15 0 1602.8253 P24534 P24534 8 22 EEF1B2 Elongation factor 1-beta yes yes 2 0.00014444 210.14 By MS/MS 8.5 0.5 1 1 2 1114800 1114800 0 12596 713 13367 32044;32045 25598 25598 1 14286 0 SPAHLSLIR VFTQAIQWYQNHQPKSPAHLSLIREAANFK QNHQPKSPAHLSLIREAANFKLKYGRKKEA K S P I R E 1 1 0 0 0 0 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 0 9 0 992.57671 O76094 O76094 443 451 SRP72 Signal recognition particle subunit SRP72 yes yes 2;3 9.4712E-05 163.15 By MS/MS 5.33 0.471 2 1 3 3540000 3540000 0 12597 362 13368 32046;32047;32048 25599;25600 25600 2 31961 0 SPAIAAVGPIK AETIREVCTKYIYNRSPAIAAVGPIKQLPD IYNRSPAIAAVGPIKQLPDFKQIRSNMCWL R S P I K Q 3 0 0 0 0 0 0 1 0 2 0 1 0 0 2 1 0 0 0 1 0 0 11 0 1022.6124 O75439 O75439 462 472 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.0082392 95.358 By MS/MS 7 0 1 1 1248100 1248100 0 12598 329 13369 32049 25601 25601 1 19593 0 SPAIGLNNLDK ALESNDLVSVQNQLRSPAIGLNNLDKAYVE NQLRSPAIGLNNLDKAYVERYANTLLSVKL R S P D K A 1 0 2 1 0 0 0 1 0 1 2 1 0 0 1 1 0 0 0 0 0 0 11 0 1140.6139 Q13576 Q13576 396 406 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.016029 94.363 By MS/MS 3 0 1 1 340510 340510 0 12599 1399 13370 32050 25602 25602 1 6230.4 0 SPALQILLTNTK GALRYHQGKISSLKRSPALQILLTNTKVPR LKRSPALQILLTNTKVPRNTRALVAGVRNR R S P T K V 1 0 1 0 0 1 0 0 0 1 3 1 0 0 1 1 2 0 0 0 0 0 12 0 1297.7606 Q03426 Q03426 227 238 MVK Mevalonate kinase yes yes 2 0.00029513 144.28 By MS/MS 7 0 1 1 152380 152380 0 12600 1288 13371 32051 25603 25603 1 2392.1 0 SPALQVLR NTILKCLRRFHVFARSPALQVLREMKAIGI RFHVFARSPALQVLREMKAIGIEPSLATYH R S P L R E 1 1 0 0 0 1 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 882.5287 Q96EY7 Q96EY7 351 358 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.0029896 134.81 By MS/MS By matching 5 0 2 1 1 11669000 11547000 121770 12601 2151 13372 32052;32053 25604 25604 1 115810 102260 SPASDTYIVFGEAK SKNILFVITKPDVYKSPASDTYIVFGEAKI KSPASDTYIVFGEAKIEDLSQQAQLAAAEK K S P A K I 2 0 0 1 0 0 1 1 0 1 0 1 0 1 1 2 1 0 1 1 0 0 14 0 1483.7195 Q13765;E9PAV3 Q13765 114 127 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 0.00044717 160.86 By MS/MS 7 0 1 1 3144400 3144400 0 12602 75 13373 32054 25605 25605 1 49361 0 SPCYIDKDCDLDIVCR AAKHLTPVTLELGGKSPCYIDKDCDLDIVC PCYIDKDCDLDIVCRRITWGKYMNCGQTCI K S P C R R 0 1 0 4 3 0 0 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 16 1 2027.8751 P51648 P51648 212 227 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 3 0.0002901 148.7 By MS/MS 6 0 1 1 2800900 2800900 0 12603 1002 13374 32055 25606 25606 1 19254 0 SPDCPVCSR AIKTPQCYKEDGSSKSPDCPVCSRSLNKLA EDGSSKSPDCPVCSRSLNKLAQPLPMAHCA K S P S R S 0 1 0 1 2 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 1076.4379 Q7L5Y9 Q7L5Y9 311 319 MAEA Macrophage erythroblast attacher yes yes 2 0.0078616 104.2 By MS/MS 7 0 1 1 917240 917240 0 12604 1767 13375 32056 25607 25607 1 14399 0 SPDEAYAIAK LQEAGVSVPKGYVAKSPDEAYAIAKKLGSK GYVAKSPDEAYAIAKKLGSKDVVIKAQVLA K S P A K K 3 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 10 0 1063.5186 Q9P2R7 Q9P2R7 79 88 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00020511 146.79 By MS/MS By matching 7 0 2 1 1 4156300 4126600 29648 12605 2690 13376 32057;32058 25608 25608 1 64781 53394 SPDEAYAIAKK LQEAGVSVPKGYVAKSPDEAYAIAKKLGSK YVAKSPDEAYAIAKKLGSKDVVIKAQVLAG K S P K K L 3 0 0 1 0 0 1 0 0 1 0 2 0 0 1 1 0 0 1 0 0 0 11 1 1191.6136 Q9P2R7 Q9P2R7 79 89 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2;3 6.0338E-05 166.07 By MS/MS 7 0 2 2 1491500 1491500 0 12606 2690 13377 32059;32060 25609;25610 25609 2 23413 0 SPDEPLPVVR VTRLLLAPRRGLTVRSPDEPLPVVRIPVAL GLTVRSPDEPLPVVRIPVALQRQLEQRQSR R S P V R I 0 1 0 1 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1107.5924 Q9NUL7 Q9NUL7 28 37 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.01001 94.309 By MS/MS 6.5 0.5 1 1 2 4416900 4416900 0 12607 2582 13378 32061;32062 25611 25611 1 31725 0 SPDFHEEIK EFSKEAYTAVVYHNRSPDFHEEIKVKLPAT VVYHNRSPDFHEEIKVKLPATLTDHHHLLF R S P I K V 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 0 0 0 9 0 1100.5138 Q96N67 Q96N67 625 633 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0139 93.598 By MS/MS 2.5 0.5 1 1 2 552810 552810 0 12608 2201 13379 32063;32064 25612 25612 1 133000 0 SPDFTNENPLETR VDNSSLTGESEPQTRSPDFTNENPLETRNI TRSPDFTNENPLETRNIAFFSTNCVEGTAR R S P T R N 0 1 2 1 0 0 2 0 0 0 1 0 0 1 2 1 2 0 0 0 0 0 13 0 1518.6951 P05023 P05023 228 240 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 8.2923E-34 312.69 By MS/MS By MS/MS 3.77 1.62 1 2 3 3 2 1 1 10 3 37913000 37524000 389870 12609 481 13380 32065;32066;32067;32068;32069;32070;32071;32072;32073;32074;32075;32076;32077 25613;25614;25615;25616;25617;25618;25619;25620;25621;25622;25623 25621 11 4593000 499350 SPDSDVAATLK IVALNKIDRLYDWKKSPDSDVAATLKKQKK DWKKSPDSDVAATLKKQKKNTKDEFEERAK K S P L K K 2 0 0 2 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 11 0 1102.5506 O60841 O60841 767 777 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 0.0016205 112.85 By MS/MS 3 0 1 1 322710 322710 0 12610 283 13381 32078 25624 25624 1 5904.7 0 SPDTILQK LRRYIKEYVTCHTCRSPDTILQKDTRLYFL VTCHTCRSPDTILQKDTRLYFLQCETCHSR R S P Q K D 0 0 0 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 8 0 900.49165 P20042 P20042 286 293 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 3.4894E-06 186.09 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 17686000 17590000 96094 12611 668 13382 32079;32080;32081;32082;32083;32084 25625;25626 25626 2 138670 98469 SPDTILQKDTR LRRYIKEYVTCHTCRSPDTILQKDTRLYFL HTCRSPDTILQKDTRLYFLQCETCHSRCSV R S P T R L 0 1 0 2 0 1 0 0 0 1 1 1 0 0 1 1 2 0 0 0 0 0 11 1 1272.6674 P20042 P20042 286 296 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.001389 136.02 By MS/MS 6 0 1 1 2861500 2861500 0 12612 668 13383 32085 25627 25627 1 19671 0 SPEIISGR ANWGLPIAAINDMKKSPEIISGRMTFALCC AINDMKKSPEIISGRMTFALCCYSLTFMRF K S P G R M 0 1 0 0 0 0 1 1 0 2 0 0 0 0 1 2 0 0 0 0 0 0 8 0 857.46068 Q9Y5U8 Q9Y5U8 47 54 MPC1 Mitochondrial pyruvate carrier 1 yes yes 2 0.029286 90.37 By MS/MS 10 0 1 1 402110 402110 0 12613 2923 13384 32086 25628;25629 25629 2 21672 0 SPELLAR INNNAVTKMAQSSSKSPELLARYCDSLLKK KMAQSSSKSPELLARYCDSLLKKSSKNPEE K S P A R Y 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 7 0 784.4443 Q13616 Q13616 418 424 CUL1 Cullin-1 yes yes 2 0.0071094 146.94 By MS/MS 4 0 1 1 1428400 1428400 0 12614 1402 13385 32087 25630 25630 1 134420 0 SPELPSPQAEK TLRITVEDSDKQLLKSPELPSPQAEKRLPK QLLKSPELPSPQAEKRLPKLRLEIIDKDSK K S P E K R 1 0 0 0 0 1 2 0 0 0 1 1 0 0 3 2 0 0 0 0 0 0 11 0 1181.5928 Q9H078 Q9H078 663 673 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.030825 79.986 By MS/MS 6 0 1 1 2152800 2152800 0 12615 2402 13386 32088 25631 25631 1 14799 0 SPEQNVPVILLK GTDPRILSIAAEVAKSPEQNVPVILLKLKE VAKSPEQNVPVILLKLKEIINITPLGSSEL K S P L K L 0 0 1 0 0 1 1 0 0 1 2 1 0 0 2 1 0 0 0 2 0 0 12 0 1335.7762 Q15051 Q15051 20 31 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 2.486E-05 175.33 By MS/MS 5 0 1 1 1760700 1760700 0 12616 1482 13387 32089 25632 25632 1 17659 0 SPEQQLSATQK GGVITSDMIEMIFSKSPEQQLSATQKFRKL IFSKSPEQQLSATQKFRKLLSKEPNPPIDE K S P Q K F 1 0 0 0 0 3 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1215.6095 P52294 P52294 95 105 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 2 2.3222E-05 166.86 By MS/MS 6 0 1 1 932780 932780 0 12617 1014 13388 32090 25633 25633 1 6412.1 0 SPEVGMR TGHRIIIEYLLEATRSPEVGMRQAAAIILN EYLLEATRSPEVGMRQAAAIILNIYCSRSK R S P M R Q 0 1 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 7 0 774.36942 Q92616 Q92616 2162 2168 GCN1L1 Translational activator GCN1 yes yes 2 0.021611 111.04 By MS/MS 2 0 1 1 408230 408230 0 12618 2064 13389 32091 25634 25634 1 138080 0 SPEVLLGSAR PIRVYTHEVVTLWYRSPEVLLGSARYSTPV TLWYRSPEVLLGSARYSTPVDIWSIGTIFA R S P A R Y 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 1 0 0 10 0 1027.5662 P06493 P06493 171 180 CDK1 Cyclin-dependent kinase 1 yes yes 2 6.9022E-08 195.79 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 9670600 9613900 56717 12619 496 13390 32092;32093;32094 25635;25636 25636 2 122000 76536 SPEYLSLFIDDK TIAGDFEYFLNLNSRSPEYLSLFIDDKLKK NSRSPEYLSLFIDDKLKKGVKGLTEQEVET R S P D K L 0 0 0 2 0 0 1 0 0 1 2 1 0 1 1 2 0 0 1 0 0 0 12 0 1425.7028 Q13618 Q13618 384 395 CUL3 Cullin-3 yes yes 2 6.9637E-06 181.53 By MS/MS 4 0 1 1 99668 99668 0 12620 1404 13391 32095 25637;25638 25637 2 9379.4 0 SPFEVYVDK THKVTVLFAGQHIAKSPFEVYVDKSQGDAS GQHIAKSPFEVYVDKSQGDASKVTAQGPGL K S P D K S 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 1 2 0 0 9 0 1082.5284 P21333 P21333 368 376 FLNA Filamin-A yes yes 2 0.0014459 123.21 By MS/MS 2 0.816 1 1 1 3 1624700 1624700 0 12621 677 13392 32096;32097;32098 25639;25640 25639 2 427680 0 SPFEVYVDKSQGDASK THKVTVLFAGQHIAKSPFEVYVDKSQGDAS PFEVYVDKSQGDASKVTAQGPGLEPSGNIA K S P S K V 1 0 0 2 0 1 1 1 0 0 0 2 0 1 1 3 0 0 1 2 0 0 16 1 1755.8315 P21333 P21333 368 383 FLNA Filamin-A yes yes 3 0.0050524 92.427 By MS/MS 2.5 1.12 1 1 1 1 4 1058100 1058100 0 12622 677 13393 32099;32100;32101;32102 25641 25641 1 239480 0 SPFSVAVSPSLDLSK PVGVNVTYGGDPIPKSPFSVAVSPSLDLSK SPFSVAVSPSLDLSKIKVSGLGEKVDVGKD K S P S K I 1 0 0 1 0 0 0 0 0 0 2 1 0 1 2 5 0 0 0 2 0 0 15 0 1532.8086 P21333 P21333 959 973 FLNA Filamin-A yes yes 2 0.00039665 146.07 By MS/MS 1.5 0.5 1 1 2 751790 751790 0 12623 677 13394 32103;32104 25642;25643;25644 25642 3 233370 0 SPFTVGVAAPLDLSK NMQVLVTYGGDPIPKSPFTVGVAAPLDLSK SPFTVGVAAPLDLSKIKLNGLENRVEVGKD K S P S K I 2 0 0 1 0 0 0 1 0 0 2 1 0 1 2 2 1 0 0 2 0 0 15 0 1500.8188 O75369 O75369 932 946 FLNB Filamin-B yes yes 2 0.00038406 168.83 By MS/MS 1.5 0.5 1 1 2 250030 250030 0 12624 315 13395 32105;32106 25645;25646;25647 25646 3 76406 0 SPFVVQVGEACNPNACR PHVVKIFFAGDTIPKSPFVVQVGEACNPNA FVVQVGEACNPNACRASGRGLQPKGVRIRE K S P C R A 2 1 2 0 2 1 1 1 0 0 0 0 0 1 2 1 0 0 0 3 0 0 17 0 1903.8669 O75369 O75369 440 456 FLNB Filamin-B yes yes 2 8.7217E-05 190.57 By MS/MS 1 0 1 1 102810 102810 0 12625 315 13396 32107 25648;25649 25648 2 24775 0 SPGAPGPLTLK QHPVPPPAQNQNQVRSPGAPGPLTLKEVEE NQVRSPGAPGPLTLKEVEELEQLTQQLMQD R S P L K E 1 0 0 0 0 0 0 2 0 0 2 1 0 0 3 1 1 0 0 0 0 0 11 0 1036.5917 Q15942 Q15942 344 354 ZYX Zyxin yes yes 2 0.035812 77.379 By MS/MS 5 0 1 1 2509100 2509100 0 12626 1541 13397 32108 25650 25650 1 25165 0 SPGEVLALVQR LLIKGNSASKTRLCRSPGEVLALVQRKVVP RLCRSPGEVLALVQRKVVPTFEAVAPQSRE R S P Q R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1167.6612 O94927 O94927 417 427 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.00024721 163.16 By MS/MS 5 0 1 1 894250 894250 0 12627 377 13398 32109 25651 25651 1 8968.9 0 SPIAEAVFR ATKSVLFVCLGNICRSPIAEAVFRKLVTDQ LGNICRSPIAEAVFRKLVTDQNISENWRVD R S P F R K 2 1 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 9 0 988.53418 P24666 P24666 20 28 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 0.0022045 109.11 By MS/MS 9.5 0.5 1 1 2 4656400 4656400 0 12628 715 13399 32110;32111 25652 25652 1 240760 0 SPIAEAVFRK ATKSVLFVCLGNICRSPIAEAVFRKLVTDQ GNICRSPIAEAVFRKLVTDQNISENWRVDS R S P R K L 2 1 0 0 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 0 0 10 1 1116.6291 P24666 P24666 20 29 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 0.031626 96.034 By MS/MS 10 0 1 1 730520 730520 0 12629 715 13400 32112 25653 25653 1 39372 0 SPIAPEELALVHNLR INALWGRTTLKREDKSPIAPEELALVHNLR SPIAPEELALVHNLRKMMKNDWHGGAIVSA K S P L R K 2 1 1 0 0 0 2 0 1 1 3 0 0 0 2 1 0 0 0 1 0 0 15 0 1657.9152 P51398 P51398 280 294 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.00035431 141.73 By MS/MS 7.5 0.5 1 1 2 1900200 1900200 0 12630 993 13401 32113;32114 25654 25654 1 29426 0 SPIEFLENAYEK FSPIPFLGHAIAFGKSPIEFLENAYEKYGP FGKSPIEFLENAYEKYGPVFSFTMVGKTFT K S P E K Y 1 0 1 0 0 0 3 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 12 0 1438.698 Q16850 Q16850 80 91 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 5.3069E-06 186.74 By MS/MS 5.5 0.5 1 1 2 2443900 2443900 0 12631 1561 13402 32115;32116 25655 25655 1 17401 0 SPILVATAVAAR QRDREEALHQFRSGKSPILVATAVAARGLD SGKSPILVATAVAARGLDISNVKHVINFDL K S P A R G 4 1 0 0 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1167.6976 O00571;O15523 O00571 492 503 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.3037E-12 236.32 By MS/MS By MS/MS 6.5 2.4 1 2 1 1 1 1 1 7 1 43385000 43260000 125400 12632 116 13403 32117;32118;32119;32120;32121;32122;32123;32124 25656;25657;25658;25659;25660;25661 25658 3 502000 105300 SPLAAPR QYIPVLVDSFLPLLKSPLAAPRIKNPFLSL DSFLPLLKSPLAAPRIKNPFLSLAACVMPS K S P P R I 2 1 0 0 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 7 0 710.40752 Q92616 Q92616 890 896 GCN1L1 Translational activator GCN1 yes yes 2 0.012706 128.38 By MS/MS 3 0.816 1 1 1 3 2435000 2435000 0 12633 2064 13404 32125;32126;32127 25662 25662 1 616280 0 SPLAELGVLK FVSLDHIKELLMETRSPLAELGVLKKLCDH LMETRSPLAELGVLKKLCDHPRLLSARACC R S P L K K 1 0 0 0 0 0 1 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 10 0 1025.6121 Q2NKX8 Q2NKX8 399 408 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.027849 93.598 By MS/MS 3 0 1 1 77216 77216 0 12634 1569 13405 32128 25663 25663 0 1412.8 0 SPLGEVAIR FSAMEFLDGDGGSLRSPLGEVAIRDIVQFV DGGSLRSPLGEVAIRDIVQFVPFRQFQNAP R S P I R D 1 1 0 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 9 0 940.53418 O75131 O75131 476 484 CPNE3 Copine-3 yes yes 2 0.025226 86.67 By MS/MS 6 0 1 1 1808000 1808000 0 12635 294 13406 32129 25664 25664 1 12428 0 SPLIIFNDCELDK AVSNLKKVSLELGGKSPLIIFNDCELDKAV GKSPLIIFNDCELDKAVRMGMGAVFFNKGE K S P D K A 0 0 1 2 1 0 1 0 0 2 2 1 0 1 1 1 0 0 0 0 0 0 13 0 1562.765 Q3SY69 Q3SY69 699 711 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.0023358 111.52 By MS/MS 4 0 1 1 953250 953250 0 12636 1578 13407 32130 25665;25666 25665 2 89707 0 SPLQSVVVR AVSELSPRERSPALKSPLQSVVVRRRSPRP RSPALKSPLQSVVVRRRSPRPSPVPKPSPP K S P V R R 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 0 3 0 0 9 0 983.57638 Q9Y2W1 Q9Y2W1 253 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0077269 104.44 By MS/MS 4 0.816 1 1 1 3 1038100 1038100 0 12637 2846 13408 32131;32132;32133 25667 25667 1 57206 0 SPLSSPQQTQLLGELEKDPK STGVEIKRIMAKAFKSPLSSPQQTQLLGEL PQQTQLLGELEKDPKLVYHIGLTPAKLPDL K S P P K L 0 0 0 1 0 3 2 1 0 0 4 2 0 0 3 3 1 0 0 0 0 0 20 1 2194.1481 Q9UKZ1 Q9UKZ1 336 355 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 3 0.0064937 80.541 By MS/MS 6 0 1 1 1789200 1789200 0 12638 2767 13409 32134 25668 25668 1 12299 0 SPLTQEQLIPNLAMK EEHLQRVGHFDPVTRSPLTQEQLIPNLAMK SPLTQEQLIPNLAMKEVIDAFISENGWVED R S P M K E 1 0 1 0 0 2 1 0 0 1 3 1 1 0 2 1 1 0 0 0 0 0 15 0 1681.9073 Q9UNE7 Q9UNE7 273 287 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.00057361 156.36 By MS/MS 8 0 1 1 521150 521150 0 12639 2786 13410 32135 25669 25669 1167 1 6579.5 0 SPLVMDVLNIQGVQR SISTEFLALMKKVSKSPLVMDVLNIQGVQR SPLVMDVLNIQGVQRSLERLADLLGKIQKA K S P Q R S 0 1 1 1 0 2 0 1 0 1 2 0 1 0 1 1 0 0 0 3 0 0 15 0 1667.9029 Q14204 Q14204 1585 1599 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.8383E-07 215.72 By MS/MS 1.5 0.5 1 1 2 227290 227290 0 12640 1433 13411 32136;32137 25670;25671;25672;25673 25672 839 4 65316 0 SPNELVDDLFK SERSGQQIVGPPRKKSPNELVDDLFKGAKE PRKKSPNELVDDLFKGAKEHGAVAVERVTK K S P F K G 0 0 1 2 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 11 0 1275.6347 Q9UNZ2 Q9UNZ2 114 124 NSFL1C NSFL1 cofactor p47 yes yes 2 0.040441 79.07 By MS/MS 7 0 1 1 72107 72107 0 12641 2796 13412 32138 25674 25674 0 1132 0 SPNQNVQQAAAGALR VYQLGGICKLVDLLRSPNQNVQQAAAGALR SPNQNVQQAAAGALRNLVFRSTTNKLETRR R S P L R N 4 1 2 0 0 3 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1523.7805 Q13835 Q13835 298 312 PKP1 Plakophilin-1 yes yes 2 2.2651E-31 272.1 By matching By MS/MS 5.67 3.09 1 1 1 1 2 2834500 1156200 1678300 12642 1410 13413 32139;32140;32141 25675;25676 25676 2 108800 440070 SPQEEALQR DSDSSQRDRNGNQLRSPQEEALQRLVNLYG NGNQLRSPQEEALQRLVNLYGLLHGLQAAV R S P Q R L 1 1 0 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1056.52 Q92974 Q92974 733 741 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.024738 86.882 By MS/MS 4 0 1 1 788050 788050 0 12643 2083 13414 32142 25677 25677 1 74160 0 SPQENLVPCDVLLLR ASDEIVPGDIVSIGRSPQENLVPCDVLLLR SPQENLVPCDVLLLRGRCIVDEAMLTGESV R S P L R G 0 1 1 1 1 1 1 0 0 0 4 0 0 0 2 1 0 0 0 2 0 0 15 0 1751.924 Q9HD20 Q9HD20 328 342 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.00043309 161.25 By MS/MS 2.33 1.25 1 1 1 3 554920 554920 0 12644 2517 13415 32143;32144;32145 25678;25679;25680 25678 3 112370 0 SPQNQYPAELMR RLMMEQRSRDPGMVRSPQNQYPAELMRRFE MVRSPQNQYPAELMRRFELYFQGPSSNKPR R S P M R R 1 1 1 0 0 2 1 0 0 0 1 0 1 0 2 1 0 0 1 0 0 0 12 0 1432.6769 P33993 P33993 121 132 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.030314 79.23 By MS/MS 4.5 0.5 1 1 2 1480200 1480200 0 12645 808 13416 32146;32147 25681 25681 401 1 65383 0 SPQPQLLSNK WTLTTRFIEARASGKSPQPQLLSNKEKAEA RASGKSPQPQLLSNKEKAEARKLWEYKNSV K S P N K E 0 0 1 0 0 2 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1110.6033 Q15031 Q15031 711 720 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0011205 109.83 By MS/MS 4.5 0.5 1 1 2 1241500 1241500 0 12646 1477 13417 32148;32149 25682 25682 1 95222 0 SPQQSAALPR EASAPKAALEPKESRSPQQSAALPRRYMLR PKESRSPQQSAALPRRYMLREREGAPEPAS R S P P R R 2 1 0 0 0 2 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 10 0 1053.5567 Q6IBW4 Q6IBW4 284 293 NCAPH2 Condensin-2 complex subunit H2 yes yes 2 0.0068331 101.46 By MS/MS 4 0 1 1 272260 272260 0 12647 1682 13418 32150 25683 25683 1 25621 0 SPRPQDLIR QRALLQQQPEDDSKRSPRPQDLIRLYDIIL EDDSKRSPRPQDLIRLYDIILQNLVELLQL R S P I R L 0 2 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 1 1080.604 Q9UHB9 Q9UHB9 418 426 SRP68 Signal recognition particle subunit SRP68 yes yes 3 0.0068444 99.013 By MS/MS 5 0 1 1 2256900 2256900 0 12648 2728 13419 32151 25684 25684 1 22636 0 SPSDLLDASAVSATSR RNNREILAGKPAAQKSPSDLLDASAVSATS PSDLLDASAVSATSRYIEEQQATQQLIMDE K S P S R Y 3 1 0 2 0 0 0 0 0 0 2 0 0 0 1 5 1 0 0 1 0 0 16 0 1575.774 O60499 O60499 132 147 STX10 Syntaxin-10 yes yes 2 5.4486E-28 248.67 By MS/MS 8 0 1 1 0 0 0 12649 259 13420 32152 25685 25685 1 0 0 SPSDSSTASTPVAEQIER LDSHRRMAPTPIPTRSPSDSSTASTPVAEQ DSSTASTPVAEQIERALDEVTSSQPPPLPP R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 Q16643 Q16643 337 354 DBN1 Drebrin yes yes 2 2.4834E-24 276.32 By MS/MS 4 0 1 1 1105100 1105100 0 12650 1556 13421 32153 25686 25686 1 104000 0 SPSFGGASEASAR APPASGDGFEPQMVKSPSFGGASEASARTP VKSPSFGGASEASARTPPQVVQPSPSLSTF K S P A R T 3 1 0 0 0 0 1 2 0 0 0 0 0 1 1 4 0 0 0 0 0 0 13 0 1222.5578 Q8WVT3 Q8WVT3 182 194 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.00018046 179.94 By MS/MS 4 0 1 1 292780 292780 0 12651 2029 13422 32154 25687 25687 1 27553 0 SPSGSAFGSQENLR RGQLGTYTIASPPERSPSGSAFGSQENLRW RSPSGSAFGSQENLRWRKDMTHWRQNTEKL R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 1.6938E-43 322.07 By MS/MS 2 0.816 1 1 1 3 5159800 5159800 0 12652 2201 13423 32155;32156;32157 25688;25689;25690 25689 3 1378800 0 SPSNKDAALLEAAR MCALAAALVVHCYSKSPSNKDAALLEAARA KSPSNKDAALLEAARANNMQEVSRLLSEGA K S P A R A 4 1 1 1 0 0 1 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1441.7525 Q9H078 Q9H078 130 143 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.012339 120.9 By MS/MS 6 0 1 1 5891100 5891100 0 12653 2402 13424 32158 25691 25691 1 40497 0 SPSPVLR DQKQEEKPKPDPVLKSPSPVLRLVLSGEKK PKPDPVLKSPSPVLRLVLSGEKKEQEGQTS K S P L R L 0 1 0 0 0 0 0 0 0 0 1 0 0 0 2 2 0 0 0 1 0 0 7 0 754.43374 O43432 O43432 230 236 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.034026 101.69 By MS/MS 2.5 0.5 1 1 2 362370 362370 0 12654 210 13425 32159;32160 25692 25692 1 99790 0 SPSSEVWFDRR NNTAGDDLAKLLWLKSPSSEVWFDRRTNYT LWLKSPSSEVWFDRRTNYTRSLAVMSMVGY K S P R R T 0 2 0 1 0 0 1 0 0 0 0 0 0 1 1 3 0 1 0 1 0 0 11 1 1364.6473 P42345 P42345 2307 2317 MTOR Serine/threonine-protein kinase mTOR yes yes 3 0.052988 52.725 By MS/MS 2 0 1 1 0 0 0 12655 879 13426 32161 25693 25693 1 0 0 SPSVAVVQPK AGIENKFGLYLPKFKSPSVAVVQPKAAVAA LPKFKSPSVAVVQPKAAVAATQ________ K S P P K A 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 2 0 0 0 3 0 0 10 0 1010.576 O75746 O75746 662 671 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0010212 123.21 By MS/MS 5 0 1 1 1358000 1358000 0 12656 344 13427 32162 25694;25695 25694 2 13620 0 SPTAPSVFSPTGNR TTTPLKGIPKQAPFRSPTAPSVFSPTGNRT RSPTAPSVFSPTGNRTPIPPSRTLLRKERG R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 Q9H3P2 Q9H3P2 225 238 NELFA Negative elongation factor A yes yes 2 0.0013596 104.07 By MS/MS 5 0 1 1 1041700 1041700 0 12657 2439 13428 32163 25696 25696 1 10448 0 SPTLYGISHDDLK VNWLGYAYLYIRMLRSPTLYGISHDDLKGD LRSPTLYGISHDDLKGDPLLDQRRLDLVHT R S P L K G 0 0 0 2 0 0 0 1 1 1 2 1 0 0 1 2 1 0 1 0 0 0 13 0 1444.7198 O75643 O75643 932 944 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00022007 160.67 By MS/MS 1.5 0.5 1 1 2 594850 594850 0 12658 340 13429 32164;32165 25697 25697 1 182980 0 SPTPPLFSLPEAR ______________________________ ______________________________ M S P A R T 1 1 0 0 0 0 1 0 0 0 2 0 0 1 4 2 1 0 0 0 0 0 13 0 1410.7507 Q96FV9 Q96FV9 2 14 THOC1 THO complex subunit 1 yes yes 2 0.0028229 110.08 By MS/MS 5 0 1 1 550360 550360 0 12659 2154 13430 32166 25698 25698 1 5519.9 0 SPTWFGIPR EFLYVEGLPEGIPFRSPTWFGIPRLERIVR EGIPFRSPTWFGIPRLERIVRGSNKIKFVV R S P P R L 0 1 0 0 0 0 0 1 0 1 0 0 0 1 2 1 1 1 0 0 0 0 9 0 1059.5502 P78347 P78347 620 628 GTF2I General transcription factor II-I yes yes 2 0.0020909 108.46 By MS/MS 3.5 0.5 1 1 2 55295 55295 0 12660 1221 13431 32167;32168 25699;25700;25701 25700 3 1011.7 0 SPVAKDVDLEFLAK DEKSRVAILKANLRKSPVAKDVDLEFLAKM KSPVAKDVDLEFLAKMTNGFSGADLTEICQ K S P A K M 2 0 0 2 0 0 1 0 0 0 2 2 0 1 1 1 0 0 0 2 0 0 14 1 1530.8294 P55072 P55072 664 677 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.00014389 172.58 By MS/MS 4.5 0.5 1 1 2 1185900 1185900 0 12661 1054 13432 32169;32170 25702 25702 1 86296 0 SPVESTTEPPAVR ETNVFFYPRLLPLTKSPVESTTEPPAVRAS TKSPVESTTEPPAVRASEERLSNGDIYLLE K S P V R A 1 1 0 0 0 0 2 0 0 0 0 0 0 0 3 2 2 0 0 2 0 0 13 0 1368.6885 P53992 P53992 957 969 SEC24C Protein transport protein Sec24C yes yes 2 0.00040064 141.91 By MS/MS 3 0 1 1 342150 342150 0 12662 1039 13433 32171 25703 25703 1 6260.3 0 SPVEVAQDVLAAVGK GSRYGVMDTTTAQGRSPVEVAQDVLAAVGK SPVEVAQDVLAAVGKKKKDVILADLLPSLA R S P G K K 3 0 0 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 0 4 0 0 15 0 1481.809 Q6IAN0 Q6IAN0 268 282 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 0.00061681 158.34 By MS/MS 8 0 1 1 123320 123320 0 12663 1681 13434 32172 25704;25705 25705 2 1556.9 0 SPVFSSSDGSLWETVAR PAAHSFVDLLLCVARSPVFSSSDGSLWETV VFSSSDGSLWETVARALSCLGPTHMGPLAL R S P A R A 1 1 0 1 0 0 1 1 0 0 1 0 0 1 1 5 1 1 0 2 0 0 17 0 1823.869 Q6PJG6 Q6PJG6 269 285 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.000177 179.59 By MS/MS 5 0 1 1 152860 152860 0 12664 1720 13435 32173 25706 25706 1 1533.1 0 SPVGEFLLAGGR MARYVFSNFTAVPKRSPVGEFLLAGGRTKT PKRSPVGEFLLAGGRTKTWLVGNKLVTVTT R S P G R T 1 1 0 0 0 0 1 3 0 0 2 0 0 1 1 1 0 0 0 1 0 0 12 0 1201.6455 P49815 P49815 1045 1056 TSC2 Tuberin yes yes 2 0.00068742 130.98 By MS/MS 2.5 0.5 1 1 2 181180 181180 0 12665 965 13436 32174;32175 25707;25708 25707 2 61281 0 SPVILLR KSLMNLLFSLHVSYKSPVILLRDLSQDIHG FSLHVSYKSPVILLRDLSQDIHGHLGDIDQ K S P L R D 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 7 0 796.51707 Q9NVI1 Q9NVI1 1041 1047 FANCI Fanconi anemia group I protein yes yes 2 0.01889 113.08 By MS/MS 3 0 1 1 669060 669060 0 12666 2597 13437 32176 25709 25709 1 12242 0 SPVPLTPPGCVALDTR LTLGWDTYLSYLKYRSPVPLTPPGCVALDT PVPLTPPGCVALDTRAD_____________ R S P T R A 1 1 0 1 1 0 0 1 0 0 2 0 0 0 4 1 2 0 0 2 0 0 16 0 1678.8712 Q567V2 Q567V2 189 204 MPV17L2 Mpv17-like protein 2 yes yes 2 0.00039293 144.28 By MS/MS 9 0 1 1 1775600 1775600 0 12667 1596 13438 32177 25710 25710 1 34944 0 SPVTFLSDLR PPQFKKDLDSYLKTRSPVTFLSDLRSNLQV YLKTRSPVTFLSDLRSNLQVSNEPGNRYNL R S P L R S 0 1 0 1 0 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 0 0 10 0 1133.6081 A5YKK6 A5YKK6 2188 2197 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 1.5966E-07 185.81 By MS/MS 5 0.816 1 1 1 3 945790 945790 0 12668 19 13439 32178;32179;32180 25711 25711 1 14161 0 SPVTLLR TVDDLFRLATRFIQRSPVTLLRSQVVIPIL LATRFIQRSPVTLLRSQVVIPILQWAIAST R S P L R S 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 7 0 784.48069 Q9Y5L0 Q9Y5L0 763 769 TNPO3 Transportin-3 yes yes 2 0.0057158 152.63 By MS/MS 4.5 0.5 1 1 2 3136000 3136000 0 12669 2915 13440 32181;32182 25712 25712 1 266930 0 SPYGGGRPGR IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN DFSLRSPYGGGRPGRVKRKNAKKGQGGAGA R S P G R V 0 2 0 0 0 0 0 4 0 0 0 0 0 0 2 1 0 0 1 0 0 0 10 1 1002.4995 P46781 P46781 163 172 RPS9 40S ribosomal protein S9 yes yes 2;3 0.00019875 122.19 By MS/MS 9 0.816 2 2 2 6 93513000 93513000 0 12670 918 13441 32183;32184;32185;32186;32187;32188 25713;25714;25715 25714 3 1856200 0 SPYQEFTDHLVK SYLTPDLWKETVFTKSPYQEFTDHLVKTHT FTKSPYQEFTDHLVKTHTRVSVQRTQAPAV K S P V K T 0 0 0 1 0 1 1 0 1 0 1 1 0 1 1 1 1 0 1 1 0 0 12 0 1462.7092 P15880 P15880 264 275 RPS2 40S ribosomal protein S2 yes yes 2;3 6.152E-05 163.84 By MS/MS 8.71 1.03 1 2 2 2 7 85877000 85877000 0 12671 627 13442 32189;32190;32191;32192;32193;32194;32195 25716;25717;25718;25719;25720;25721 25717 6 1118300 0 SPYTVTVGQACNPSACR VHTVHVTFAGVPIPRSPYTVTVGQACNPSA YTVTVGQACNPSACRAVGRGLQPKGVRVKE R S P C R A 2 1 1 0 2 1 0 1 0 0 0 0 0 0 2 2 2 0 1 2 0 0 17 0 1866.8353 P21333 P21333 468 484 FLNA Filamin-A yes yes 2 3.8657E-44 316.42 By MS/MS 3 1.41 1 1 1 1 1 5 2942700 2942700 0 12672 677 13443 32196;32197;32198;32199;32200 25722;25723 25722 2 608080 0 SPYYKYEEK PYLLIPFILLIFMLRSPYYKYEEKRKKK__ LIFMLRSPYYKYEEKRKKK___________ R S P E K R 0 0 0 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 3 0 0 0 9 1 1205.5605 Q5BJF2 Q5BJF2 164 172 TMEM97 Transmembrane protein 97 yes yes 2 0.0030699 138.06 By MS/MS 9 0 1 1 292940 292940 0 12673 1598 13444 32201 25724 25724 1 5765.1 0 SQAADQITK AQRMAENLGFVGPLKSQAADQITKLYNLFL FVGPLKSQAADQITKLYNLFLKIDATQVEV K S Q T K L 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 9 0 960.48762 Q96I99 Q96I99 219 227 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.054716 82.831 By MS/MS 7 0 1 1 0 0 0 12674 2172 13445 32202 25725 25725 1 0 0 SQAALQK VYLVYDQELLGPSDKSQAALQKAGEVVPPA ELLGPSDKSQAALQKAGEVVPPAMYQFSQY K S Q Q K A 2 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 7 0 744.413 Q5XKP0 Q5XKP0 37 43 QIL1 Protein QIL1 yes yes 2 0.038374 98.418 By MS/MS 10 0 1 1 2984800 2984800 0 12675 1663 13446 32203 25726 25726 1 160870 0 SQADQFCQR EADATKNKEKLEKLKSQADQFCQRLGKYRM KLEKLKSQADQFCQRLGKYRMPFAWTAIHL K S Q Q R L 1 1 0 1 1 3 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1138.4826 Q96N67 Q96N67 382 390 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.7162E-22 248.96 By MS/MS 3 1.41 1 1 1 1 1 5 2273800 2273800 0 12676 2201 13447 32204;32205;32206;32207;32208 25727;25728 25727 2 540970 0 SQAPTLELLQNPK TIASLKKLILEVGEKSQAPTLELLQNPKEV EKSQAPTLELLQNPKEVLTRSEIQDVNYSL K S Q P K E 1 0 1 0 0 2 1 0 0 0 3 1 0 0 2 1 1 0 0 0 0 0 13 0 1437.7827 Q9C037 Q9C037 257 269 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 2 1.7416E-07 214.26 By MS/MS 6 0 1 1 3827300 3827300 0 12677 2386 13448 32209 25729 25729 1 26310 0 SQAQQPQKEAALSS EKHFRDVESQKILQRSQAQQPQKEAALSS_ RSQAQQPQKEAALSS_______________ R S Q S S - 3 0 0 0 0 4 1 0 0 0 1 1 0 0 1 3 0 0 0 0 0 0 14 1 1471.7267 Q3MHD2 Q3MHD2 182 195 LSM12 Protein LSM12 homolog yes yes 2 0.0023919 134.49 By MS/MS By matching 8.67 0.471 1 2 2 1 4764500 4743300 21282 12678 1577 13449 32210;32211;32212 25730;25731;25732 25732 3 85992 48530 SQDAEVGDGTTSVTLLAAEFLK DVVHPAAKTLVDIAKSQDAEVGDGTTSVTL DGTTSVTLLAAEFLKQVKPYVEEGLHPQII K S Q L K Q 3 0 0 2 0 1 2 2 0 0 3 1 0 1 0 2 3 0 0 2 0 0 22 0 2251.122 Q99832 Q99832 85 106 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.3981E-26 300.2 By MS/MS 6.33 0.471 2 1 3 3680700 3680700 0 12679 2270 13450 32213;32214;32215 25733;25734;25735;25736;25737 25736 5 25594 0 SQDDRDKFLGR EVTVECKIDGSANLKSQDDRDKFLGRVMFK ANLKSQDDRDKFLGRVMFKITARA______ K S Q G R V 0 2 0 3 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 2 1335.6531 P54709 P54709 260 270 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 3 0.00076619 123.62 By MS/MS 7.5 0.5 1 1 2 2493700 2493700 0 12680 1047 13451 32216;32217 25738 25738 1 36804 0 SQDGDTAACSLIQAR LISLVELILAEAETRSQDGDTAACSLIQAR SQDGDTAACSLIQARLPLLLSCCCGDDESV R S Q A R L 3 1 0 2 1 2 0 1 0 1 1 0 0 0 0 2 1 0 0 0 0 0 15 0 1591.726 Q8N201 Q8N201 1747 1761 INTS1 Integrator complex subunit 1 yes yes 2 7.6244E-24 279.56 By MS/MS 2 0 1 1 325030 325030 0 12681 1907 13452 32218 25739 25739 1 109940 0 SQDIYLR IRHNKDRKVRRKEPKSQDIYLRLLVKLYRF KVRRKEPKSQDIYLRLLVKLYRFLARRTNS K S Q L R L 0 1 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 7 0 893.46068 Q07020 Q07020 20 26 RPL18 60S ribosomal protein L18 yes yes 2 0.032667 102.71 By MS/MS 8.5 0.5 1 1 2 4032200 4032200 0 12682 1298 13453 32219;32220 25740 25740 1 66922 0 SQDPPALARSTPGSNSADGGRTK AKRVEVVEEDGPSEKSQDPPALARSTPGSN RSTPGSNSADGGRTKASRAIWIECLPSMPS K S Q T K A 3 2 1 2 0 1 0 3 0 0 1 1 0 0 3 4 2 0 0 0 0 0 23 2 2269.1047 O15231 O15231 231 253 ZNF185 Zinc finger protein 185 yes yes 3 0.0058895 79.467 By MS/MS By MS/MS 7 1.29 1 1 2 1 1 1 5 491990 0 491990 12683 172 13454 32221;32222;32223;32224;32225;32226 25741;25742;25743;25744 25742 2 0 817190 SQDSYPVSPR GTDSEVRCLGGRSPKSQDSYPVSPRPFSSP GRSPKSQDSYPVSPRPFSSPSMSPSHGMNI K S Q P R P 0 1 0 1 0 1 0 0 0 0 0 0 0 0 2 3 0 0 1 1 0 0 10 0 1134.5306 Q96S59 Q96S59 470 479 RANBP9 Ran-binding protein 9 yes yes 2 0.032655 80.706 By MS/MS 4 0 1 1 427800 427800 0 12684 2232 13455 32227 25745 25745 1 40259 0 SQEEVVSLLR GDRLIEVNGVDLVGKSQEEVVSLLRSTKME DLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ K S Q L R S 0 1 0 0 0 1 2 0 0 0 2 0 0 0 0 2 0 0 0 2 0 0 10 0 1158.6245 Q8TEW0 Q8TEW0 523 532 PARD3 Partitioning defective 3 homolog yes yes 2 0.0015261 113.44 By MS/MS 3.5 0.5 1 1 2 323920 323920 0 12685 2004 13456 32228;32229 25746 25746 1 16589 0 SQEQLAAELAEYTAK RAKEELERQAVDQIKSQEQLAAELAEYTAK SQEQLAAELAEYTAKIALLEEARRRKEDEV K S Q A K I 4 0 0 0 0 2 3 0 0 0 2 1 0 0 0 1 1 0 1 0 0 0 15 0 1650.8101 P15311 P15311 413 427 EZR Ezrin yes yes 2 0.006111 111.12 By MS/MS 5 0 1 1 592010 592010 0 12686 624 13457 32230 25747 25747 0 5937.6 0 SQETECTYFSTPLLLGK AMNGKEGVVECSFVKSQETECTYFSTPLLL ETECTYFSTPLLLGKKGIEKNLGIGKVSSF K S Q G K K 0 0 0 0 1 1 2 1 0 0 3 1 0 1 1 2 3 0 1 0 0 0 17 0 1972.9452 P40926 P40926 280 296 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 7.2665E-11 230.36 By MS/MS 7.5 0.5 1 1 2 620540 620540 0 12687 862 13458 32231;32232 25748;25749;25750 25750 3 8223.2 0 SQFAYCMLIR AVSKMLNKFTKSGLKSQFAYCMLIRIASRL KSGLKSQFAYCMLIRIASRLLKETEDGHES K S Q I R I 1 1 0 0 1 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 10 0 1287.6104 Q9UBF2 Q9UBF2 225 234 COPG2 Coatomer subunit gamma-2 yes yes 2 0.0026126 114.4 By MS/MS 4 0 1 1 0 0 0 12688 2697 13459 32233 25751 25751 1145 1 0 0 SQFEELCAELLQK ECFMNDKDVSGKMNRSQFEELCAELLQKIE NRSQFEELCAELLQKIEVPLYSLLEQTHLK R S Q Q K I 1 0 0 0 1 2 3 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 13 0 1593.7709 Q92598 Q92598 304 316 HSPH1 Heat shock protein 105 kDa yes yes 2 0.0092091 91.093 By MS/MS 4 0 1 1 168270 168270 0 12689 2059 13460 32234 25752 25752 1 15836 0 SQFTITPGSEQIR AAVAKQALAHGLKCKSQFTITPGSEQIRAT CKSQFTITPGSEQIRATIERDGYAQILRDL K S Q I R A 0 1 0 0 0 2 1 1 0 2 0 0 0 1 1 2 2 0 0 0 0 0 13 0 1462.7416 Q99798 Q99798 412 424 ACO2 Aconitate hydratase, mitochondrial yes yes 2 0.036193 90.685 By MS/MS 5 0 1 1 1146300 1146300 0 12690 2268 13461 32235 25753 25753 0 11496 0 SQGCSEQVLTVLK SWVQSYCRLSHCRSRSQGCSEQVLTVLKTV SRSQGCSEQVLTVLKTVSLLDENNVSSYLS R S Q L K T 0 0 0 0 1 2 1 1 0 0 2 1 0 0 0 2 1 0 0 2 0 0 13 0 1447.7341 P78527 P78527 3290 3302 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.0509E-05 203.61 By MS/MS By MS/MS 2.67 1.49 2 1 1 1 1 5 1 10443000 10411000 31066 12691 1225 13462 32236;32237;32238;32239;32240;32241 25754;25755;25756;25757;25758;25759 25759 6 1836700 31066 SQGGVQPIPSQGGK HCGAFSGSDSSRTSKSQGGVQPIPSQGGKL KSQGGVQPIPSQGGKLEIAGTVVGHWAGSR K S Q G K L 0 0 0 0 0 3 0 4 0 1 0 1 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q9NZB2 Q9NZB2 933 946 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 0.04468 71.153 By MS/MS 3 0 1 1 336890 336890 0 12692 2647 13463 32242 25760 25760 0 6164.2 0 SQHSGNAQVTQTK GFVALSKAPDGYIVKSQHSGNAQVTQTKFL VKSQHSGNAQVTQTKFLPNAPKALIVEPSR K S Q T K F 1 0 1 0 0 3 0 1 1 0 0 1 0 0 0 2 2 0 0 1 0 0 13 0 1384.6695 Q92499 Q92499 269 281 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2;3 5.4207E-17 294.49 By MS/MS By matching 4.86 0.639 2 4 1 5 2 3783100 3755900 27167 12693 2046 13464 32243;32244;32245;32246;32247;32248;32249 25761;25762;25763;25764 25764 4 172480 22814 SQHYSSEK FGLFAPLVFLSSYGKSQHYSSEKSAFLLSI FLSSYGKSQHYSSEKSAFLLSILAFVDMVA K S Q E K S 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 3 0 0 1 0 0 0 8 0 964.42502 P53985 P53985 290 297 SLC16A1 Monocarboxylate transporter 1 yes yes 2 3.5916E-06 185.58 By MS/MS 3.25 2.28 1 1 1 1 4 1226500 1226500 0 12694 1038 13465 32250;32251;32252;32253 25765;25766;25767 25766 3 207770 0 SQICDNAALYAQK QTDDEEEAGLLELLKSQICDNAALYAQKYD LKSQICDNAALYAQKYDEEFQRYLPRFVTA K S Q Q K Y 3 0 1 1 1 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1480.698 P55060 P55060 269 281 CSE1L Exportin-2 yes yes 2 4.2947E-17 259.18 By MS/MS 4 0 1 1 6805000 6805000 0 12695 1053 13466 32254 25768 25768 1 640390 0 SQIDDLYSTIKV PTMKAKRPELRNYFRSQIDDLYSTIKV___ YFRSQIDDLYSTIKV_______________ R S Q K V - 0 0 0 2 0 1 0 0 0 2 1 1 0 0 0 2 1 0 1 1 0 0 12 1 1380.7137 P33121 P33121 687 698 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 1.9826E-05 208.33 By MS/MS 5 0 1 1 1273300 1273300 0 12696 799 13467 32255 25769 25769 1 12771 0 SQIFSTASDNQPTVTIK MTKLIPRNTVVPTKKSQIFSTASDNQPTVT IFSTASDNQPTVTIKVYEGERPLTKDNHLL K S Q I K V 1 0 1 1 0 2 0 0 0 2 0 1 0 1 1 3 3 0 0 1 0 0 17 0 1835.9265 P11021 P11021 448 464 HSPA5 78 kDa glucose-regulated protein yes yes 2 8.3012E-45 333.59 By MS/MS By MS/MS 5.8 2.32 1 2 1 1 3 2 45242000 44901000 340910 12697 571 13468 32256;32257;32258;32259;32260 25770;25771;25772;25773;25774;25775 25774 6 460750 146800 SQIHDIVLVGGSTR LDPVEKALRDAKLDKSQIHDIVLVGGSTRI KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 P11142 P11142 329 342 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.00080414 128.73 By MS/MS By matching 5.62 0.992 1 3 2 2 7 1 54381000 54310000 70334 12698 572 13469 32261;32262;32263;32264;32265;32266;32267;32268 25776;25777;25778 25777 3 551480 59065 SQILSGTLPQDELK FRSVRHMIYDLIEWRSQILSGTLPQDELKE RSQILSGTLPQDELKELKKKVTAKIDYGNR R S Q L K E 0 0 0 1 0 2 1 1 0 1 3 1 0 0 1 2 1 0 0 0 0 0 14 0 1527.8144 Q14185 Q14185 130 143 DOCK1 Dedicator of cytokinesis protein 1 yes yes 2 4.1415E-07 205.02 By MS/MS 2 0 1 1 200620 200620 0 12699 1429 13470 32269 25779 25779 1 67859 0 SQKDQNTFQK AVLHPEFHIQFLGGKSQKDQNTFQKLLHIN FLGGKSQKDQNTFQKLLHINATALLEYPEY K S Q Q K L 0 0 1 1 0 3 0 0 0 0 0 2 0 1 0 1 1 0 0 0 0 0 10 1 1222.5942 Q969Z0 Q969Z0 444 453 TBRG4 Protein TBRG4 yes yes 2 0.0004001 172.98 By MS/MS 6 0 1 1 0 0 0 12700 2099 13471 32270 25780 25780 1 0 0 SQLDLFDDVGTFASGPPK QVIEQETPVSAKSSRSQLDLFDDVGTFASG DLFDDVGTFASGPPKYKDNPFSLGESFGSR R S Q P K Y 1 0 0 3 0 1 0 2 0 0 2 1 0 2 2 2 1 0 0 1 0 0 18 0 1892.9156 Q8N6H7 Q8N6H7 340 357 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 2 4.0692E-17 261.61 By MS/MS 6 0 1 1 156590 156590 0 12701 1927 13472 32271 25781 25781 1 1076.4 0 SQLGAHHTTPVGDGAAGTR ______________________________ AHHTTPVGDGAAGTRGLAAPGSRDHQKEKS R S Q T R G 3 1 0 1 0 1 0 4 2 0 1 0 0 0 1 1 3 0 0 1 0 0 19 0 1831.8925 Q5BJD5 Q5BJD5 10 28 TMEM41B Transmembrane protein 41B yes yes 3 0.00026444 114.56 By MS/MS 8 0 1 1 3135600 3135600 0 12702 1597 13473 32272 25782 25782 1 39587 0 SQLLSYIDR GNINICLMGDPGVAKSQLLSYIDRLAPRSQ DPGVAKSQLLSYIDRLAPRSQYTTGRGSSG K S Q D R L 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 1 0 0 0 9 0 1093.5768 P33993 P33993 388 396 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.00071286 140.17 By MS/MS 5.5 1.12 1 1 1 1 4 7005000 7005000 0 12703 808 13474 32273;32274;32275;32276 25783;25784 25783 2 250810 0 SQLQISNNR SEADSDKNATILELRSQLQISNNRTLELQG TILELRSQLQISNNRTLELQGLINDLQRER R S Q N R T 0 1 2 0 0 2 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1058.5469 P15924 P15924 1754 1762 DSP Desmoplakin yes yes 2 9.0869E-05 163.88 By MS/MS By MS/MS 2.6 1.02 1 1 2 1 4 1 1398600 972310 426300 12704 628 13475 32277;32278;32279;32280;32281 25785;25786;25787;25788 25787 4 252060 54262 SQLSCVVVDDIER AKCQAMKKIFDDAYKSQLSCVVVDDIERLL YKSQLSCVVVDDIERLLDYVPIGPRFSNLV K S Q E R L 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 0 0 13 0 1518.7348 P46459 P46459 595 607 NSF Vesicle-fusing ATPase yes yes 2 3.4046E-05 180.61 By MS/MS 7 2 1 1 2 10555000 10555000 0 12705 912 13476 32282;32283 25789;25790 25789 2 107800 0 SQLTTIVLAAR VQALTLTFLAEWGDRSQLTTIVLAAREDPY WGDRSQLTTIVLAAREDPYGVAVGGTVGHC R S Q A R E 2 1 0 0 0 1 0 0 0 1 2 0 0 0 0 1 2 0 0 1 0 0 11 0 1171.6925 Q9HC07 Q9HC07 253 263 TMEM165 Transmembrane protein 165 yes yes 2 1.2507E-07 201.84 By MS/MS 4.17 2.91 1 1 1 1 1 1 6 1734200 1734200 0 12706 2508 13477 32284;32285;32286;32287;32288;32289 25791;25792;25793 25792 3 329520 0 SQMLAMNIEK PYQQVIEKTKSLSFRSQMLAMNIEKKLNQN SLSFRSQMLAMNIEKKLNQNSRSEAPNWAT R S Q E K K 1 0 1 0 0 1 1 0 0 1 1 1 2 0 0 1 0 0 0 0 0 0 10 0 1163.5679 P60228 P60228 415 424 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 2.5472E-05 164.33 By MS/MS By matching 6.4 0.49 3 2 4 1 11583000 11444000 138370 12707 1090 13478;13479 32290;32291;32292;32293;32294 25794;25795;25796 25795 611;612 3 88960 141790 SQMLAMNIEKK PYQQVIEKTKSLSFRSQMLAMNIEKKLNQN LSFRSQMLAMNIEKKLNQNSRSEAPNWATQ R S Q K K L 1 0 1 0 0 1 1 0 0 1 1 2 2 0 0 1 0 0 0 0 0 0 11 1 1291.6628 P60228 P60228 415 425 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 4.9085E-06 185.33 By MS/MS 6 0 1 1 2821800 2821800 0 12708 1090 13480 32295 25797 25797 1 19398 0 SQNPHGLK ______________________________ ______________________________ R S Q L K Q 0 0 1 0 0 1 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 879.45626 Q13616 Q13616 6 13 CUL1 Cullin-1 yes yes 2 0.013954 106.36 By MS/MS 4.5 0.5 1 1 2 649470 649470 0 12709 1402 13481 32296;32297 25798 25798 1 54803 0 SQNTVWSVIK LQTMYEMETSGKIAKSQNTVWSVIKSILRK GKIAKSQNTVWSVIKSILRKDGPLGFYHGL K S Q I K S 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 2 1 1 0 2 0 0 10 0 1160.619 Q9Y619 Q9Y619 149 158 SLC25A15 Mitochondrial ornithine transporter 1 yes yes 2 9.8809E-05 154.01 By MS/MS 8 0 1 1 1613400 1613400 0 12710 2931 13482 32298 25799 25799 1 20369 0 SQNVMAAASIANIVK PLSVFGDRSTGETIRSQNVMAAASIANIVK SQNVMAAASIANIVKSSLGPVGLDKMLVDD R S Q V K S 4 0 2 0 0 1 0 0 0 2 0 1 1 0 0 2 0 0 0 2 0 0 15 0 1515.8079 P17987 P17987 19 33 TCP1 T-complex protein 1 subunit alpha yes yes 2 2.1188E-34 315.41 By MS/MS 5.29 2.81 1 1 1 2 1 1 7 36140000 36140000 0 12711 648 13483;13484 32299;32300;32301;32302;32303;32304;32305 25800;25801;25802;25803;25804;25805;25806 25804 319 6 457680 0 SQPAILLLTAAR SQTFLEKHLNSSHPRSQPAILLLTAARDAE HPRSQPAILLLTAARDAEEALRCLSEQIAD R S Q A R D 3 1 0 0 0 1 0 0 0 1 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1252.7503 Q5JTV8 Q5JTV8 405 416 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 1.0101E-08 215.08 By MS/MS 6.5 1.12 1 1 1 1 4 4188300 4188300 0 12712 1611 13485 32306;32307;32308;32309 25807;25808 25807 2 31761 0 SQPEPSPVLSQLSQR PPTSQSSVLSHLDFKSQPEPSPVLSQLSQR SQPEPSPVLSQLSQRQQHQSQAVTVPPPGL K S Q Q R Q 0 1 0 0 0 3 1 0 0 0 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1651.8529 Q5T6F2 Q5T6F2 427 441 UBAP2 Ubiquitin-associated protein 2 yes yes 2 4.2992E-05 194.24 By MS/MS 3 0 1 1 273620 273620 0 12713 1635 13486 32310 25809 25809 1 5006.4 0 SQQALVQK QASIQHIQNAIDTEKSQQALVQKRHYLFDV NAIDTEKSQQALVQKRHYLFDVQRNNIAMA K S Q Q K R 1 0 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 900.50288 P24539 P24539 155 162 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 4.5324E-06 180.93 By MS/MS By matching 9 0 2 1 1 4387000 4312900 74086 12714 714 13487 32311;32312 25810 25810 1 84879 168940 SQQALVQKR QASIQHIQNAIDTEKSQQALVQKRHYLFDV AIDTEKSQQALVQKRHYLFDVQRNNIAMAL K S Q K R H 1 1 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1056.604 P24539 P24539 155 163 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2;3 4.3268E-10 215.39 By MS/MS 8.8 0.748 2 2 1 5 9925200 9925200 0 12715 714 13488 32313;32314;32315;32316;32317 25811;25812;25813 25813 3 148780 0 SQQELEAK VKLPTSAPRPTRFLRSQQELEAKLEQQQSA RPTRFLRSQQELEAKLEQQQSAGGDAEGGG R S Q A K L 1 0 0 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 931.46108 Q14008 Q14008 234 241 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0034326 132.76 By MS/MS 2 0 1 1 2651700 2651700 0 12716 1417 13489 32318 25814;25815 25814 2 896900 0 SQRDPLAADESAPQR FIEKKKAVSFHLVHRSQRDPLAADESAPQR SQRDPLAADESAPQRVLLPTQKIDNEERRA R S Q Q R V 3 2 0 2 0 2 1 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 15 1 1639.7914 Q96GA3 Q96GA3 24 38 LTV1 Protein LTV1 homolog yes yes 3 0.0004938 190.24 By MS/MS 5 0 1 1 1261700 1261700 0 12717 2157 13490 32319 25816 25816 1 12655 0 SQSAAVTPSSTTSSTR GSSGPPGSSSSSSSRSQSAAVTPSSTTSST QSAAVTPSSTTSSTRATPAPSAPAAASATS R S Q T R A 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 6 4 0 0 1 0 0 16 0 1566.7485 Q16186 Q16186 211 226 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 5.8097E-07 228.17 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 6045600 5914900 130700 12718 1543 13491 32320;32321;32322 25817;25818 25818 2 91837 235390 SQSFFAAAR LLQEEEQERRRPQSRSQSFFAAARAAVSAF RRPQSRSQSFFAAARAAVSAFPTDSLERDL R S Q A R A 3 1 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 9 0 983.48248 O14654 O14654 1089 1097 IRS4 Insulin receptor substrate 4 yes yes 2 0.0011886 131.62 By MS/MS 4 2 1 1 1 1 1 1 1 7 4998900 4998900 0 12719 129 13492 32323;32324;32325;32326;32327;32328;32329 25819;25820 25819 2 240520 0 SQSSDTEQQSPTSGGGK KENAWVKRSSNPPARSQSSDTEQQSPTSGG SSDTEQQSPTSGGGKVAPAQPSEEGPGRKD R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 P23588 P23588 495 511 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 2.7369E-87 388.9 By MS/MS By MS/MS 6.4 1.5 2 1 1 1 4 1 3045300 2948000 97281 12720 708 13493 32330;32331;32332;32333;32334 25821;25822;25823;25824 25823 4 40744 81695 SQSSHSYDDSTLPLIDR WKKSDFQVNLNNASRSQSSHSYDDSTLPLI SSHSYDDSTLPLIDRNQKSDKKPDREEIQM R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 O60716 O60716 859 875 CTNND1 Catenin delta-1 yes yes 3 0.0042817 99.711 By MS/MS 4 0 1 1 1241800 1241800 0 12721 272 13494 32335 25825 25825 1 116870 0 SQSTAQNLTSDIQR MMQDDLNFKSTEVQKSQSTAQNLTSDIQRL KSQSTAQNLTSDIQRLQLDLQKMELLESKM K S Q Q R L 1 1 1 1 0 3 0 0 0 1 1 0 0 0 0 3 2 0 0 0 0 0 14 0 1547.754 Q96LB3 Q96LB3 435 448 IFT74 Intraflagellar transport protein 74 homolog yes yes 2 6.2305E-24 280.57 By MS/MS 5 0 1 1 2159600 2159600 0 12722 2194 13495 32336 25826 25826 1 21660 0 SQTEAVTFLANHDDSR QVLIDARDCPHISQRSQTEAVTFLANHDDS QTEAVTFLANHDDSRALYAIPGLDYVSHED R S Q S R A 2 1 1 2 0 1 1 0 1 0 1 0 0 1 0 2 2 0 0 1 0 0 16 0 1789.8231 Q9Y2S7 Q9Y2S7 150 165 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 0.00030516 175.6 By MS/MS 7 0 1 1 1281100 1281100 0 12723 2842 13496 32337 25827 25827 1 20112 0 SQTGVGELTTQNTR YTELEYIHALTLLHRSQTGVGELTTQNTRL RSQTGVGELTTQNTRLQRLKEIICEQAAIK R S Q T R L 0 1 1 0 0 2 1 2 0 0 1 0 0 0 0 1 4 0 0 1 0 0 14 0 1490.7325 Q96A65 Q96A65 935 948 EXOC4 Exocyst complex component 4 yes yes 2 5.8618E-24 281.32 By MS/MS 4 0 1 1 1977000 1977000 0 12724 2104 13497 32338 25828 25828 1 186050 0 SQVDKLTLTSR VNQGHCHPKIVNALKSQVDKLTLTSRAFYN NALKSQVDKLTLTSRAFYNNVLGEYEEYIT K S Q S R A 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 11 1 1246.6881 P04181 P04181 103 113 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 3 0.0040932 100.04 By MS/MS 7 0 1 1 819160 819160 0 12725 470 13498 32339 25829 25829 1 12859 0 SQVFSTAADGQTQVEIK FTKLINRNTTIPTKKSQVFSTAADGQTQVE VFSTAADGQTQVEIKVCQGEREMAGDNKLL K S Q I K V 2 0 0 1 0 3 1 1 0 1 0 1 0 1 0 2 2 0 0 2 0 0 17 0 1807.8952 P38646 P38646 469 485 HSPA9 Stress-70 protein, mitochondrial yes yes 2 2.7039E-71 366.6 By MS/MS By matching 5.25 0.433 3 1 3 1 22387000 22340000 47135 12726 850 13499 32340;32341;32342;32343 25830;25831 25831 2 218090 39583 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1364.6321 CON__P13645;P13645 CON__P13645 323 333 KRT10 Keratin, type I cytoskeletal 10 yes no 2 6.2258E-60 329.85 By MS/MS By MS/MS 5.17 2.83 2 2 2 2 2 2 2 1 1 2 9 9 100330000 35835000 64497000 + 12727 50 13500 32344;32345;32346;32347;32348;32349;32350;32351;32352;32353;32354;32355;32356;32357;32358;32359;32360;32361 25832;25833;25834;25835;25836;25837;25838;25839;25840;25841;25842;25843;25844;25845;25846;25847;25848;25849;25850 25834 19 2748300 30770000 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1492.727 CON__P13645;P13645 CON__P13645 323 334 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.5363E-27 257.72 By MS/MS By MS/MS 5.09 2.69 3 3 4 5 3 6 1 2 2 3 13 19 451120000 245160000 205960000 + 12728 50 13501 32362;32363;32364;32365;32366;32367;32368;32369;32370;32371;32372;32373;32374;32375;32376;32377;32378;32379;32380;32381;32382;32383;32384;32385;32386;32387;32388;32389;32390;32391;32392;32393 25851;25852;25853;25854;25855;25856;25857;25858;25859;25860;25861;25862;25863;25864;25865;25866;25867;25868;25869;25870;25871;25872;25873;25874;25875;25876;25877;25878;25879;25880;25881 25859 29 18538000 119140000 SQYEQLAEQNRKDAEAWFNEK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE AEQNRKDAEAWFNEKSKELTTEIDNNIEQI R S Q E K S 3 1 2 1 0 3 4 0 0 0 1 2 0 1 0 1 0 1 1 0 0 0 21 2 2583.199 CON__P13645;P13645 CON__P13645 323 343 KRT10 Keratin, type I cytoskeletal 10 yes no 3 1.3226E-05 137.52 By MS/MS By MS/MS 4.5 1.5 1 1 1 1 8300600 7996600 304020 + 12729 50 13502 32394;32395 25882;25883;25884 25882 3 54970 38698 SQYNFIADVVEK AVLAAVPSPPPASPRSQYNFIADVVEKTAP SPRSQYNFIADVVEKTAPAVVYIEILDRHP R S Q E K T 1 0 1 1 0 1 1 0 0 1 0 1 0 1 0 1 0 0 1 2 0 0 12 0 1411.6983 O43464 O43464 145 156 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 4.5594E-05 168.83 By MS/MS 7.5 0.5 1 1 2 1311500 1311500 0 12730 212 13503 32396;32397 25885 25885 1 20243 0 SQYPEIIFLGTGSAIPMK YRRSAQDGPAPAEKRSQYPEIIFLGTGSAI PEIIFLGTGSAIPMKIRNVSATLVNISPDT R S Q M K I 1 0 0 0 0 1 1 2 0 3 1 1 1 1 2 2 1 0 1 0 0 0 18 0 1951.0125 Q9BQ52 Q9BQ52 478 495 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.00012124 140.27 By MS/MS 4 0 1 1 95169 95169 0 12731 2283 13504 32398 25886;25887 25887 1063 2 8956 0 SRDSFLKR AKRINVRIEHIKHSKSRDSFLKRVKENDQK EHIKHSKSRDSFLKRVKENDQKKKEAKEKG K S R K R V 0 2 0 1 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 8 2 1007.5512 P46778 P46778 101 108 RPL21 60S ribosomal protein L21 yes yes 3 0.035932 79.489 By MS/MS 9 0 1 1 0 0 0 12732 916 13505 32399 25888 25888 1 0 0 SRERPSQPEGLR TPATKRSFSKEVEERSRERPSQPEGLRKAA EERSRERPSQPEGLRKAASLTEDRDRGRDA R S R L R K 0 3 0 0 0 1 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 2 1410.7328 Q04637 Q04637 1194 1205 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00034618 159.09 By MS/MS 2.25 0.433 3 1 4 7264200 7264200 0 12733 1291 13506 32400;32401;32402;32403 25889;25890;25891 25890 3 2326900 0 SRGSGGLGGACGGAGFGSR PGVSRSGFSSISVSRSRGSGGLGGACGGAG GGLGGACGGAGFGSRSLYGLGGSKRISIGG R S R S R S 2 2 0 0 1 0 0 9 0 0 1 0 0 1 0 3 0 0 0 0 0 0 19 1 1666.7594 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 41 59 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2;3 4.3685E-11 219.85 By MS/MS By MS/MS 4.6 3.41 2 2 2 1 1 2 2 8 5904400 789090 5115300 + 12734 44;56;40 13507 32404;32405;32406;32407;32408;32409;32410;32411;32412;32413 25892;25893;25894;25895;25896;25897;25898;25899;25900;25901;25902 25895 11 14438 6029300 SRLDQELK VCRKTYVTPRRPFEKSRLDQELKLIGEYGL PRRPFEKSRLDQELKLIGEYGLRNKREVWR K S R L K L 0 1 0 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 1 987.53491 P46781 P46781 23 30 RPS9 40S ribosomal protein S9 yes yes 3 0.003796 133.13 By MS/MS 9 0.816 1 1 1 3 7642800 7642800 0 12735 918 13508 32414;32415;32416 25903 25903 1 150310 0 SRMNSLEMTPAVR FPNIASATKFKQLYRSRMNSLEMTPAVRQR YRSRMNSLEMTPAVRQRVIEEAKTAFLLNI R S R V R Q 1 2 1 0 0 0 1 0 0 0 1 0 2 0 1 2 1 0 0 1 0 0 13 1 1490.7334 P09601 P09601 184 196 HMOX1 Heme oxygenase 1 yes yes 3 0.053328 57.225 By MS/MS By matching 3.5 0.5 1 1 1 1 563690 331560 232130 12736 538 13509 32417;32418 25904 25904 237 0 31202 29546 SRPELLEYYIK STSLKAKVLETFLAKSRPELLEYYIKVILD FLAKSRPELLEYYIKVILDYNTAHNKVALS K S R I K V 0 1 0 0 0 0 2 0 0 1 2 1 0 0 1 1 0 0 2 0 0 0 11 1 1409.7555 Q14258 Q14258 448 458 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.033373 99.283 By MS/MS 5 0 1 1 1417700 1417700 0 12737 1437 13510 32419 25905 25905 1 14219 0 SRPETGRPR YLHLPPEIVPATLRRSRPETGRPRPKGLEG PATLRRSRPETGRPRPKGLEGERPARLTRG R S R P R P 0 3 0 0 0 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 9 2 1054.5632 P46783;Q9NQ39 P46783 97 105 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 3 0.011878 93.556 By MS/MS 9 0.816 1 1 1 3 47316000 47316000 0 12738 920 13511 32420;32421;32422 25906;25907 25906 2 1036700 0 SRPNASGGAACSGPGPEPAVFCEPVVK LKGHAKAAAAKKSRKSRPNASGGAACSGPG GPGPEPAVFCEPVVKLYYREEAVAEDVLNV K S R V K L 4 1 1 0 2 0 2 4 0 0 0 1 0 1 5 3 0 0 0 3 0 0 27 1 2697.2639 Q6L8Q7 Q6L8Q7 98 124 PDE12 2,5-phosphodiesterase 12 yes yes 3 4.2427E-13 139.75 By MS/MS 5 0 1 1 2785700 2785700 0 12739 1686 13512 32423 25908;25909 25908 2 27939 0 SRPSSVSPR ______________________________ ______________________________ M S R P R Q 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 9 1 971.51484 Q9H6S0 Q9H6S0 2 10 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.035066 81.95 By MS/MS 3 0 1 1 635780 635780 0 12740 2458 13513 32424 25910 25910 1 11633 0 SRPYLHGTR TLAAGQPPYPPQEQRSRPYLHGTRHGSQDC PPQEQRSRPYLHGTRHGSQDCGSRESLATS R S R T R H 0 2 0 0 0 0 0 1 1 0 1 0 0 0 1 1 1 0 1 0 0 0 9 1 1085.573 Q9UGP4 Q9UGP4 134 142 LIMD1 LIM domain-containing protein 1 yes yes 3 0.0088522 93.442 By MS/MS 5 0 1 1 633280 633280 0 12741 2723 13514 32425 25911 25911 1 6351.5 0 SRQFSSR ______________________________ ______________________________ M S R S R S 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 7 1 866.43586 CON__P04264;P04264 P04264 2 8 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.0055863 166.78 By MS/MS By MS/MS 5 3.06 3 3 2 1 1 2 2 2 1 2 7 12 138470000 34541000 103930000 + 12742 471;45 13515 32426;32427;32428;32429;32430;32431;32432;32433;32434;32435;32436;32437;32438;32439;32440;32441;32442;32443;32444 25912;25913;25914;25915;25916;25917;25918;25919;25920;25921;25922;25923;25924;25925;25926;25927;25928;25929;25930;25931;25932;25933;25934 25929 23 2550800 142000000 SRQFSSRSGYR ______________________________ ______________________________ M S R Y R S 0 3 0 0 0 1 0 1 0 0 0 0 0 1 0 4 0 0 1 0 0 0 11 2 1329.6538 CON__P04264;P04264 P04264 2 12 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.013477 90.913 By MS/MS 6 3 1 1 1 1 1 1 1 1 8 8025300 0 8025300 + 12743 471;45 13516 32445;32446;32447;32448;32449;32450;32451;32452 25935;25936;25937 25936 3 0 11384000 SRQSSVSFR ______________________________ ______________________________ M S R F R S 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 4 0 0 0 1 0 0 9 1 1052.5363 CON__P13647;P13647;CON__Q922U2 CON__P13647 2 10 KRT5 Keratin, type II cytoskeletal 5 no no 2 7.3044E-06 182.98 By MS/MS By MS/MS 4.25 2.33 1 1 2 1 1 1 1 1 7 11075000 824840 10250000 + 12744 52;74 13517 32453;32454;32455;32456;32457;32458;32459;32460 25938;25939;25940;25941;25942;25943 25939 6 15092 13268000 SRQSSVSFRSGGSR ______________________________ MSRQSSVSFRSGGSRSFSTASAITPSVSRT M S R S R S 0 3 0 0 0 1 0 2 0 0 0 0 0 1 0 6 0 0 0 1 0 0 14 2 1496.7444 CON__P13647;P13647;CON__Q922U2 CON__P13647 2 15 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 0.036864 78.287 By MS/MS 2.4 1.02 1 2 1 1 5 4662000 0 4662000 + 12745 52;74 13518 32461;32462;32463;32464;32465 25944;25945;25946 25945 3 0 6450200 SRSQGCSEQVLTVLK LVSWVQSYCRLSHCRSRSQGCSEQVLTVLK SRSQGCSEQVLTVLKTVSLLDENNVSSYLS R S R L K T 0 1 0 0 1 2 1 1 0 0 2 1 0 0 0 3 1 0 0 2 0 0 15 1 1690.8672 P78527 P78527 3288 3302 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.015463 101.72 By MS/MS 1.5 0.5 1 1 2 302750 302750 0 12746 1225 13519 32466;32467 25947 25947 1 89205 0 SRTEAESWYQTK IIAEVKAQYEEIANRSRTEAESWYQTKYEE ANRSRTEAESWYQTKYEELQQTAGRHGDDL R S R T K Y 1 1 0 0 0 1 2 0 0 0 0 1 0 0 0 2 2 1 1 0 0 0 12 1 1484.6896 CON__P13647;P13647;CON__Q922U2 CON__P13647 353 364 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 0.006166 152.96 By MS/MS By MS/MS 3.2 0.748 1 2 2 2 3 5266100 1494000 3772000 + 12747 52;74 13520 32468;32469;32470;32471;32472 25948;25949;25950 25950 3 140600 517880 SRTGSESSQTGTSTTSSR RHPSWRSEETQERERSRTGSESSQTGTSTT GSESSQTGTSTTSSRNARRRESEKSLENET R S R S R N 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 P23588 P23588 418 435 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 2.0882E-56 342.38 By MS/MS By MS/MS 5.75 0.829 4 2 2 4 4 5648300 5192900 455380 12748 708 13521 32473;32474;32475;32476;32477;32478;32479;32480 25951;25952;25953;25954;25955 25955 5 52315 420720 SSACFTLQELK AFGPDGVQGFEALLKSSACFTLQELKLNNC ALLKSSACFTLQELKLNNCGMGIGGGKILA K S S L K L 1 0 0 0 1 1 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 11 0 1282.6227 P46060 P46060 138 148 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 1.3684E-05 169.76 By MS/MS 4.5 0.5 1 1 2 6007100 6007100 0 12749 908 13522 32481;32482 25956;25957 25956 2 112200 0 SSAEVIAQAR NQTNCPLYITKVMSKSSAEVIAQARKKGTV KVMSKSSAEVIAQARKKGTVVYGEPITASL K S S A R K 3 1 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1030.5407 Q16555 Q16555 259 268 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 2 0.015418 89.029 By MS/MS 5 0 1 1 753010 753010 0 12750 1552 13523 32483 25958 25958 1 7552.3 0 SSALVIQSYIR WYRRYAQQKRYQQTKSSALVIQSYIRGWKA QQTKSSALVIQSYIRGWKARKILRELKHQK K S S I R G 1 1 0 0 0 1 0 0 0 2 1 0 0 0 0 3 0 0 1 1 0 0 11 0 1235.6874 O43795 O43795 752 762 MYO1B Unconventional myosin-Ib yes yes 2 1.3997E-06 185.77 By MS/MS 3.5 0.5 1 1 2 444530 444530 0 12751 235 13524 32484;32485 25959;25960 25959 1 35143 0 SSAPEPPTFKK ______________________________ ______________________________ M S S K K E 1 0 0 0 0 0 1 0 0 0 0 2 0 1 3 2 1 0 0 0 0 0 11 1 1187.6186 Q96KF7 Q96KF7 2 12 SMIM8 Small integral membrane protein 8 yes yes 2 0.01211 93.178 By MS/MS 10 0 1 1 162880 162880 0 12752 2187 13525 32486 25961 25961 1 8778.6 0 SSAQDPQAVLGALGR IPAACGATLPALGLRSSAQDPQAVLGALGR SSAQDPQAVLGALGRALSPLEEWLRLHTYL R S S G R A 3 1 0 1 0 2 0 2 0 0 2 0 0 0 1 2 0 0 0 1 0 0 15 0 1468.7634 P26640 P26640 123 137 VARS Valine--tRNA ligase yes yes 2 8.6087E-05 184.96 By MS/MS 5.67 3.09 1 1 1 3 2010700 2010700 0 12753 735 13526 32487;32488;32489 25962;25963;25964 25962 3 108510 0 SSAQGKPLALK GGKILAAALTECHRKSSAQGKPLALKVFVA CHRKSSAQGKPLALKVFVAGRNRLENDGAT K S S L K V 2 0 0 0 0 1 0 1 0 0 2 2 0 0 1 2 0 0 0 0 0 0 11 1 1098.6397 P46060 P46060 173 183 RANGAP1 Ran GTPase-activating protein 1 yes yes 3 0.033632 87.806 By MS/MS 5 0 1 1 782630 782630 0 12754 908 13527 32490 25965 25965 1 7849.4 0 SSASAPDVDDPEAFPALA RGRGGRPNRGSRTDKSSASAPDVDDPEAFP SAPDVDDPEAFPALA_______________ K S S L A - 5 0 0 3 0 0 1 0 0 0 1 0 0 1 3 3 0 0 0 1 0 0 18 0 1758.7948 Q8NC51 Q8NC51 391 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00023607 145.91 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 14269000 14143000 126510 12755 1946 13528 32491;32492;32493;32494;32495;32496 25966;25967;25968;25969;25970 25967 5 110480 129640 SSASGPNAPPALFELCGR ATTMEATSREAAPAKSSASGPNAPPALFEL SGPNAPPALFELCGRAVSAHMGVLESGVWA K S S G R A 3 1 1 0 1 0 1 2 0 0 2 0 0 1 3 3 0 0 0 0 0 0 18 0 1829.873 Q15345 Q15345 35 52 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 2 0.00014383 135.14 By MS/MS 4 0 1 1 325080 325080 0 12756 1498 13529 32497 25971 25971 1 30592 0 SSASQAGAAAGQGAPAPAPASQEPLPIAGPATAPAPR AAAVSTQAMHNGSPKSSASQAGAAAGQGAP EPLPIAGPATAPAPRPLGSIQRPNSFLFRS K S S P R P 13 1 0 0 0 3 1 4 0 1 1 0 0 0 8 4 1 0 0 0 0 0 37 0 3290.6644 O75427 O75427 460 496 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 3 1.0609E-16 120.32 By MS/MS 5 0 1 1 3143800 3143800 0 12757 326 13530 32498 25972 25972 1 31531 0 SSASSLNR GSSGGAKASETDALRSSASSLNRFSALQPP SETDALRSSASSLNRFSALQPPAPSGSTPS R S S N R F 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 8 0 820.40389 O43432 O43432 1093 1100 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0038052 131.03 By MS/MS 2 0 1 1 459110 459110 0 12758 210 13531 32499 25973;25974 25973 2 155290 0 SSAYESLMEIVK LETTDRPDGHQNNLRSSAYESLMEIVKNSA NLRSSAYESLMEIVKNSAKDCYPAVQKTTL R S S V K N 1 0 0 0 0 0 2 0 0 1 1 1 1 0 0 3 0 0 1 1 0 0 12 0 1355.6643 Q14974 Q14974 526 537 KPNB1 Importin subunit beta-1 yes yes 2 2.9598E-06 194.12 By MS/MS 5 0.894 2 1 2 5 1880500 1880500 0 12759 1462 13532;13533 32500;32501;32502;32503;32504 25975;25976;25977 25976 860 3 131490 0 SSCSEFSK YGEDPSNAMPVIFGKSSCSEFSKEAYTAVV MPVIFGKSSCSEFSKEAYTAVVYHNRSPDF K S S S K E 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 4 0 0 0 0 0 0 8 0 930.3753 Q96N67 Q96N67 606 613 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.00035906 162.25 By MS/MS 2 0 1 1 917580 917580 0 12760 2201 13534 32505 25978 25978 1 310360 0 SSCSEFTR TGEDPSQALPVIFGKSSCSEFTREAFTPVV LPVIFGKSSCSEFTREAFTPVVYHNKSPEF K S S T R E 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 972.39709 Q96HP0 Q96HP0 593 600 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0091062 111.74 By MS/MS 2 0 1 1 327760 327760 0 12761 2166 13535 32506 25979 25979 1 110860 0 SSDASTAQPPESQPLPASQTPASNQPK DGTGWASKQEQSDPKSSDASTAQPPESQPL QPLPASQTPASNQPKRPPAAPENTPLVPSG K S S P K R 4 0 1 1 0 4 1 0 0 0 1 1 0 0 6 6 2 0 0 0 0 0 27 0 2720.2889 P48634 P48634 97 123 PRRC2A Protein PRRC2A yes yes 3 1.3624E-12 162.11 By MS/MS 2 0 1 1 1113900 1113900 0 12762 938 13536 32507 25980 25980 1 376750 0 SSDEAVILCK NVALTFLEKTREKVKSSDEAVILCKTAIGA REKVKSSDEAVILCKTAIGALKLNIGDLQV K S S C K T 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1120.5434 Q9UNM6 Q9UNM6 106 115 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 5.8044E-08 196.99 By MS/MS 7 0 1 1 5331800 5331800 0 12763 2791 13537 32508 25981 25981 1 83700 0 SSDILSVLK VTLVVDVNQCLEGKKSSDILSVLKSSTSNA CLEGKKSSDILSVLKSSTSNANDIIPECAD K S S L K S 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 3 0 0 0 1 0 0 9 0 960.54916 Q13576 Q13576 554 562 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.022101 125.16 By MS/MS 3 0 1 1 267140 267140 0 12764 1399 13538 32509 25982 25982 0 4887.9 0 SSEAVIWEVLR LLMVLLSIIFMNGNRSSEAVIWEVLRKLGL NGNRSSEAVIWEVLRKLGLRPGIHHSLFGD R S S L R K 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 1 0 2 0 0 11 0 1287.6823 Q9UNF1 Q9UNF1 386 396 MAGED2 Melanoma-associated antigen D2 yes yes 2 1.5247E-05 193.82 By MS/MS 5 0 1 1 135690 135690 0 12765 2787 13539 32510 25983;25984 25984 2 1360.9 0 SSEELLSALQK MTQEQIQKEYDALVKSSEELLSALQKKKQQ ALVKSSEELLSALQKKKQQEEEAERLRRIQ K S S Q K K 1 0 0 0 0 1 2 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 0 1203.6347 Q9UM54 Q9UM54 905 915 MYO6 Unconventional myosin-VI yes yes 2 9.8159E-10 221.68 By MS/MS 3 0 1 1 723730 723730 0 12766 2781 13540 32511 25985 25985 1 13242 0 SSEGSLGGQNSGIGGR DHPLNHRQLSLSSSRSSEGSLGGQNSGIGG SEGSLGGQNSGIGGRSSEKPTGLWSTASSQ R S S G R S 0 1 1 0 0 1 1 6 0 1 1 0 0 0 0 4 0 0 0 0 0 0 16 0 1461.6808 Q9UGP4 Q9UGP4 239 254 LIMD1 LIM domain-containing protein 1 yes yes 2 1.2441E-24 290.1 By MS/MS 6 0.816 1 1 1 3 2284400 2284400 0 12767 2723 13541 32512;32513;32514 25986 25986 1 23518 0 SSEHVHSQGR IPPEVQRIVKVKGKRSSEHVHSQGRVMGDR VKGKRSSEHVHSQGRVMGDRSVLYKSLNPN R S S G R V 0 1 0 0 0 1 1 1 2 0 0 0 0 0 0 3 0 0 0 1 0 0 10 0 1122.5166 Q8N766 Q8N766 715 724 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.0075918 87.298 By MS/MS 1.5 0.5 1 1 2 200200 200200 0 12768 1931 13542 32515;32516 25987;25988 25988 2 61095 0 SSENGALPVVSVVR RHGYIFSSLAGCLMKSSENGALPVVSVVRE KSSENGALPVVSVVRETESQLLPDVGAIVT K S S V R E 1 1 1 0 0 0 1 1 0 0 1 0 0 0 1 3 0 0 0 4 0 0 14 0 1412.7623 Q9Y3B2 Q9Y3B2 44 57 EXOSC1 Exosome complex component CSL4 yes yes 2 0.0041494 133.88 By MS/MS 9 0 1 1 318810 318810 0 12769 2863 13543 32517 25989 25989 1 6274.3 0 SSENPNEVFR EFFLHLINMVERNCRSSENPNEVFRFLVEE ERNCRSSENPNEVFRFLVEEKIKCLATEKV R S S F R F 0 1 2 0 0 0 2 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 10 0 1177.5364 P45974 P45974 453 462 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.039226 77.533 By MS/MS 3.5 0.5 1 1 2 1665600 1665600 0 12770 906 13544 32518;32519 25990 25990 1 112960 0 SSENQGTVER PTYHDMLPAFMCSPKSSENQGTVERGSFPL MCSPKSSENQGTVERGSFPLPQLRLEPRVP K S S E R G 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 10 0 1105.5 Q5JSZ5 Q5JSZ5 291 300 PRRC2B Protein PRRC2B yes yes 2 0.0014454 115 By MS/MS 2 0 1 1 309140 309140 0 12771 1609 13545 32520 25991 25991 1 104560 0 SSEPVQLTEAETEYFVR LAAIPEFLNIGPLFKSSEPVQLTEAETEYF EPVQLTEAETEYFVRCIKHMFTNHIVFQFD K S S V R C 1 1 0 0 0 1 4 0 0 0 1 0 0 1 1 2 2 0 1 2 0 0 17 0 1983.9426 Q9UBF2 Q9UBF2 630 646 COPG2 Coatomer subunit gamma-2 yes yes 2 3.5292E-24 281.68 By MS/MS 5 0.816 1 1 1 3 7621100 7621100 0 12772 2697 13546 32521;32522;32523 25992 25992 1 571300 0 SSEQILATLK ILTGGADKNVVVFDKSSEQILATLKGHTKK VVFDKSSEQILATLKGHTKKVTSVVFHPSQ K S S L K G 1 0 0 0 0 1 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1088.6077 Q9UMS4 Q9UMS4 252 261 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.037248 78.488 By MS/MS 6 0 1 1 3517600 3517600 0 12773 2782 13547 32524 25993 25993 1 24181 0 SSFFSDR DAYSSFGSRSDSRGKSSFFSDRGSGSRGRF SRSDSRGKSSFFSDRGSGSRGRFDDRGRSD K S S D R G 0 1 0 1 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 7 0 844.37153 O00571 O00571 82 88 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.038234 98.523 By MS/MS By matching 5 0 2 1 1 10523000 10417000 106330 12774 116 13548 32525;32526 25994 25994 1 104480 89295 SSFREEDNTYR AEEREMIQKECAAIRSSFREEDNTYRCRNV AAIRSSFREEDNTYRCRNVAKLLYMHMLGY R S S Y R C 0 2 1 1 0 0 2 0 0 0 0 0 0 1 0 2 1 0 1 0 0 0 11 1 1402.6113 O43747 O43747 36 46 AP1G1 AP-1 complex subunit gamma-1 yes yes 3 0.012317 85.924 By MS/MS 4 0 1 1 632140 632140 0 12775 231 13549 32527 25995 25995 1 59488 0 SSFSHYSGLKHEDKR SRGKREFDRHSGSDRSSFSHYSGLKHEDKR SSFSHYSGLKHEDKRGGSGSHNWGTVKDEL R S S K R G 0 1 0 1 0 0 1 1 2 0 1 2 0 1 0 4 0 0 1 0 0 0 15 2 1776.8543 Q8NC51 Q8NC51 202 216 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 0.042237 67.095 By MS/MS 6 0 1 1 1271700 1271700 0 12776 1946 13550 32528 25996 25996 1 8742.2 0 SSFVFVR YLLKMVAKQWYDFDRSSFVFVRKLREGQNF KQWYDFDRSSFVFVRKLREGQNFIFRHQHD R S S V R K 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 2 0 0 7 0 840.44939 Q9ULT8 Q9ULT8 1049 1055 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.040164 97.071 By MS/MS 2 0.816 1 1 1 3 732820 732820 0 12777 2774 13551 32529;32530;32531 25997 25997 1 172930 0 SSFYPDGGDQETAK TIAPQNAPRDESRGRSSFYPDGGDQETAKT RSSFYPDGGDQETAKTGKFLKRFTDEESRV R S S A K T 1 0 0 2 0 1 1 2 0 0 0 1 0 1 1 2 1 0 1 0 0 0 14 0 1500.6369 Q9NYF8 Q9NYF8 319 332 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 2 0.0065017 99.752 By MS/MS By matching 1.75 0.829 2 1 1 3 1 630230 581280 48945 12778 2633 13552 32532;32533;32534;32535 25998 25998 1 80081 48945 SSFYVNGLTLGGQK NITPAEVGVLVGKDRSSFYVNGLTLGGQKC RSSFYVNGLTLGGQKCSVIRDSLLQDGEFS R S S Q K C 0 0 1 0 0 1 0 3 0 0 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1469.7514 P07737 P07737 57 70 PFN1 Profilin-1 yes yes 2 3.66E-24 285.83 By MS/MS 10 0 1 1 1375600 1375600 0 12779 510 13553 32536 25999 25999 1 74139 0 SSGAPAPGSGATIFALSSGQGR AAQAARGPRRLCTRRSSGAPAPGSGATIFA GSGATIFALSSGQGRCGIAVIRTSGPASGH R S S G R C 4 1 0 0 0 1 0 5 0 1 1 0 0 1 2 5 1 0 0 0 0 0 22 0 1974.9759 Q969Y2 Q969Y2 24 45 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 2.0118E-07 201.57 By MS/MS 7 0.816 1 1 1 3 4461900 4461900 0 12780 2098 13554 32537;32538;32539 26000;26001;26002 26001 3 46684 0 SSGASSIFDLR NDSRRGSGSPEDTPRSSGASSIFDLRNLAA DTPRSSGASSIFDLRNLAADSLLPSLLERA R S S L R N 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 4 0 0 0 0 0 0 11 0 1138.5619 Q96HP0 Q96HP0 185 195 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0004617 132.32 By MS/MS 3 0.816 1 1 1 3 975690 975690 0 12781 2166 13555 32540;32541;32542 26003 26003 1 275070 0 SSGDPEQIKEDSLSEESADAR SERNCLEESEGCYCRSSGDPEQIKEDSLSE QIKEDSLSEESADARSFEMTEFNQALEEIK R S S A R S 2 1 0 3 0 1 4 1 0 1 1 1 0 0 1 5 0 0 0 0 0 0 21 1 2248.9931 Q9BVS4 Q9BVS4 369 389 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 3 1.2086E-05 154.19 By MS/MS 5 0 1 1 1106900 1106900 0 12782 2339 13556 32543 26004 26004 1 11102 0 SSGEIVYCGQVFEK SRFWYFVSQLKKMKKSSGEIVYCGQVFEKS KSSGEIVYCGQVFEKSPLRVKNFGIWLRYD K S S E K S 0 0 0 0 1 1 2 2 0 1 0 1 0 1 0 2 0 0 1 2 0 0 14 0 1601.7396 Q02543 Q02543 57 70 RPL18A 60S ribosomal protein L18a yes yes 2 6.7477E-05 182.25 By MS/MS 9 0 1 1 1927400 1927400 0 12783 1278 13557 32544 26005 26005 1 37932 0 SSGFGQHESR GQSSGFGQHGSVSGQSSGFGQHESRSRQSS SVSGQSSGFGQHESRSRQSSYGQHGSGSSQ Q S S S R S 0 1 0 0 0 1 1 2 1 0 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1090.4792 CON__Q5D862;Q5D862 CON__Q5D862 528 537 FLG2 Filaggrin-2 yes no 2 0.049871 86.189 By MS/MS 4 0 1 1 126170 0 126170 + 12784 67 13558 32545 26006 26006 1 0 268830 SSGGSEHSTEGSVSLGDGQLNR MGRPFQKNRVKPQFRSSGGSEHSTEGSVSL STEGSVSLGDGQLNRYSSRNFPAERHNPTV R S S N R Y 0 1 1 1 0 1 2 5 1 0 2 0 0 0 0 6 1 0 0 1 0 0 22 0 2159.9679 Q71RC2 Q71RC2 381 402 LARP4 La-related protein 4 yes yes 3 2.9125E-06 139.9 By MS/MS 4.5 0.5 1 1 2 2176500 2176500 0 12785 1750 13559 32546;32547 26007 26007 1 167070 0 SSGGSYRDSYDSYATHNE DYYSSRSQSGGYSDRSSGGSYRDSYDSYAT GSYRDSYDSYATHNE_______________ R S S N E - 1 1 1 2 0 0 1 2 1 0 0 0 0 0 0 5 1 0 3 0 0 0 18 1 1994.7878 Q14011 Q14011 155 172 CIRBP Cold-inducible RNA-binding protein yes yes 3 0.00012713 142.74 By MS/MS 9 0 1 1 184420 184420 0 12786 1418 13560 32548 26008 26008 1 3629.3 0 SSGLPNIPVQTISR PGFPSFNHTQFPPSRSSGLPNIPVQTISRA RSSGLPNIPVQTISRAAAEKLFGNMEGDCP R S S S R A 0 1 1 0 0 1 0 1 0 2 1 0 0 0 2 3 1 0 0 1 0 0 14 0 1467.8045 P02786 P02786 326 339 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0014717 116.71 By MS/MS By matching 5.5 1.71 1 1 1 1 1 1 5 1 16873000 16158000 715050 12787 458 13561 32549;32550;32551;32552;32553;32554 26009;26010 26009 2 662250 91015 SSGLTAVWVAR KDADSQNPDAPEGKRSSGLTAVWVARNRFA EGKRSSGLTAVWVARNRFAVLDRMHSLLIK R S S A R N 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 1 1 0 2 0 0 11 0 1145.6193 P53621 P53621 413 423 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00060979 170.47 By MS/MS 2 0.816 1 1 1 3 418980 418980 0 12788 1034 13562 32555;32556;32557 26011;26012;26013 26013 3 117240 0 SSGPGGQNVNK DSDIPLDRLTISYCRSSGPGGQNVNKVNSK SYCRSSGPGGQNVNKVNSKAEVRFHLATAE R S S N K V 0 0 2 0 0 1 0 3 0 0 0 1 0 0 1 2 0 0 0 1 0 0 11 0 1043.4996 Q14197 Q14197 84 94 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 3.7665E-05 157.34 By MS/MS 9 0 1 1 1859300 1859300 0 12789 1431 13563 32558 26014 26014 1 36592 0 SSGPGGQNVNKVNSK DSDIPLDRLTISYCRSSGPGGQNVNKVNSK SSGPGGQNVNKVNSKAEVRFHLATAEWIAE R S S S K A 0 0 3 0 0 1 0 3 0 0 0 2 0 0 1 3 0 0 0 2 0 0 15 1 1471.7379 Q14197 Q14197 84 98 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.0030021 164.13 By MS/MS 9 0 1 1 319050 319050 0 12790 1431 13564 32559 26015 26015 1 6278.9 0 SSGPPSYFIK KTSEVVRLPYPLQMKSSGPPSYFIKRESWG PLQMKSSGPPSYFIKRESWGWTDFLMNPMV K S S I K R 0 0 0 0 0 0 0 1 0 1 0 1 0 1 2 3 0 0 1 0 0 0 10 0 1081.5444 Q9NPA0 Q9NPA0 142 151 EMC7 ER membrane protein complex subunit 7 yes yes 2 0.032691 80.688 By MS/MS 9 0 1 1 1601700 1601700 0 12791 2529 13565 32560 26016 26016 1 31521 0 SSGPTSLFAVTVAPPGAR QPQQQRGAAKEAAGKSSGPTSLFAVTVAPP PTSLFAVTVAPPGARQGQQQAGGKKKAEGG K S S A R Q 3 1 0 0 0 0 0 2 0 0 1 0 0 1 3 3 2 0 0 2 0 0 18 0 1713.905 Q00839 Q00839 187 204 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.00024255 169.09 By MS/MS 4 0 1 1 2073800 2073800 0 12792 1264 13566 32561 26017 26017 1 195150 0 SSGSLGHRPSQEMDK EPSVSIPFLQTALLRSSGSLGHRPSQEMDK SSGSLGHRPSQEMDKMLKNQATSATSEKDN R S S D K M 0 1 0 1 0 1 1 2 1 0 1 1 1 0 1 4 0 0 0 0 0 0 15 1 1614.742 Q5SW79 Q5SW79 463 477 CEP170 Centrosomal protein of 170 kDa yes yes 3 0.0034154 102.33 By MS/MS 2 0 1 1 377010 377010 0 12793 1623 13567 32562 26018 26018 1 127520 0 SSGSSYPSLLQCLK AAGTECLISGWGNTKSSGSSYPSLLQCLKA KSSGSSYPSLLQCLKAPVLSDSSCKSSYPG K S S L K A 0 0 0 0 1 1 0 1 0 0 3 1 0 0 1 5 0 0 1 0 0 0 14 0 1525.7446 CON__P00761 CON__P00761 134 147 yes yes 2 5.8434E-06 172.17 By MS/MS By MS/MS 5.88 3.02 2 1 2 2 1 2 2 2 2 8 8 4944400 4013300 931100 + 12794 37 13568 32563;32564;32565;32566;32567;32568;32569;32570;32571;32572;32573;32574;32575;32576;32577;32578 26019;26020;26021;26022;26023;26024;26025;26026;26027;26028;26029;26030;26031;26032;26033;26034;26035;26036;26037;26038;26039;26040;26041;26042;26043 26020 25 240510 1155800 SSGSVASLPQSDR SLEPSYQKSLQTYLKSSGSVASLPQSDRSS LKSSGSVASLPQSDRSSSSSQESLNRPFSS K S S D R S 1 1 0 1 0 1 0 1 0 0 1 0 0 0 1 5 0 0 0 1 0 0 13 0 1289.6212 O75122 O75122 310 322 CLASP2 CLIP-associating protein 2 yes yes 2 0.017189 86.463 By MS/MS 3 0 1 1 302200 302200 0 12795 292 13569 32579 26044 26044 1 5529.5 0 SSGVPVDGFYTEEVR VGKTTLIHKASEVLKSSGVPVDGFYTEEVR SSGVPVDGFYTEEVRQGGRRIGFDVVTLSG K S S V R Q 0 1 0 1 0 0 2 2 0 0 0 0 0 1 1 2 1 0 1 3 0 0 15 0 1640.7682 Q9BSD7 Q9BSD7 28 42 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 0.00047281 146.5 By MS/MS 9 0 1 1 2102500 2102500 0 12796 2304 13570 32580 26045 26045 1 41377 0 SSHAVELACR APRTIFQRVLDILKKSSHAVELACRDPSQV DILKKSSHAVELACRDPSQVENLASSLQLI K S S C R D 2 1 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1128.5346 Q9UBB4 Q9UBB4 57 66 ATXN10 Ataxin-10 yes yes 2 0.032553 80.755 By MS/MS 7 0 1 1 324250 324250 0 12797 2693 13571 32581 26046 26046 1 5090.2 0 SSHYDELLAAEAR GLATVIRYRQDDDQRSSHYDELLAAEARAI QRSSHYDELLAAEARAIKNGKGLHSKKEVP R S S A R A 3 1 0 1 0 0 2 0 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1460.6896 Q7KZF4 Q7KZF4 473 485 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.00013473 169.82 By MS/MS 4 0 1 1 3072700 3072700 0 12798 1755 13572 32582 26047 26047 1 289160 0 SSIDSEPALVLGPLK TITTDKMMDVTVTIKSSIDSEPALVLGPLK SSIDSEPALVLGPLKSVQELRREQQLAEIE K S S L K S 1 0 0 1 0 0 1 1 0 1 3 1 0 0 2 3 0 0 0 1 0 0 15 0 1524.8399 Q15155;P69849;Q5JPE7 Q15155 686 700 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 6.0043E-05 190.57 By MS/MS 2.5 1.12 1 1 1 1 4 474880 474880 0 12799 1216 13573 32583;32584;32585;32586 26048;26049;26050;26051;26052 26051 5 80392 0 SSIDYQYQLLR TEFPGVVVRPIGEFRSSIDYQYQLLRCNVD GEFRSSIDYQYQLLRCNVDLLKIIQLGLTF R S S L R C 0 1 0 1 0 2 0 0 0 1 2 0 0 0 0 2 0 0 2 0 0 0 11 0 1384.6987 Q9UFF9 Q9UFF9 56 66 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 2 0.0012543 116.52 By MS/MS 8 0 1 1 555600 555600 0 12800 2714 13574 32587 26053;26054 26053 2 7014.4 0 SSIGTGYDLSASTFSPDGR ______________________________ TGYDLSASTFSPDGRVFQVEYAMKAVENSS M S S G R V 1 1 0 2 0 0 0 3 0 1 1 0 0 1 1 5 2 0 1 0 0 0 19 0 1916.8752 P25788 P25788 2 20 PSMA3 Proteasome subunit alpha type-3 yes yes 2 2.4583E-57 338.47 By MS/MS 8 0 1 1 574330 574330 0 12801 726 13575 32588 26055 26055 1 7250.8 0 SSISALNSSQLEPVVR GDMRIMENNLENELKSSISALNSSQLEPVV SISALNSSQLEPVVRFLHLLLDKLILLVIR K S S V R F 1 1 1 0 0 1 1 0 0 1 2 0 0 0 1 5 0 0 0 2 0 0 16 0 1685.8948 Q96N67 Q96N67 772 787 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 1.9152E-33 310.34 By MS/MS 2.5 0.5 1 1 2 622770 622770 0 12802 2201 13576 32589;32590 26056 26056 1 186860 0 SSITEPEGPNGPNIQK LRKKLSNAPRPLKKRSSITEPEGPNGPNIQ SITEPEGPNGPNIQKLLYQRTTIAAMETIS R S S Q K L 0 0 2 0 0 1 2 2 0 2 0 1 0 0 3 2 1 0 0 0 0 0 16 0 1666.8162 Q13625 Q13625 736 751 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 1.6281E-12 257.13 By MS/MS 3 0 1 1 511580 511580 0 12803 1406 13577 32591 26057 26057 1 9360.4 0 SSKAEAEALYQTK SIITEVRARYEEIARSSKAEAEALYQTKVY ARSSKAEAEALYQTKVYQELQVSAQLHGDR R S S T K V 3 0 0 0 0 1 2 0 0 0 1 2 0 0 0 2 1 0 1 0 0 0 13 1 1424.7147 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 295 307 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.004502 149.69 By matching By MS/MS 3.67 0.471 1 2 1 2 573660 181490 392170 + 12804 70 13578 32592;32593;32594 26058 26058 1 17079 120460 SSKQHYNCEHSK LYGPSSVSFADDFVRSSKQHYNCEHSKINF FVRSSKQHYNCEHSKINFRDKRSALQSINE R S S S K I 0 0 1 0 1 1 1 0 2 0 0 2 0 0 0 3 0 0 1 0 0 0 12 1 1503.6525 P50454 P50454 149 160 SERPINH1 Serpin H1 yes yes 2 0.040104 94.465 By MS/MS 6 0 1 1 22257 22257 0 12805 975 13579 32595 26059 26059 1 153 0 SSLEEGISVLK GCVSQQRYERACWMKSSLEEGISVLKSIEF CWMKSSLEEGISVLKSIEFLSSKWKKLIPE K S S L K S 0 0 0 0 0 0 2 1 0 1 2 1 0 0 0 3 0 0 0 1 0 0 11 0 1160.6289 Q9Y2Z2 Q9Y2Z2 534 544 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.00010764 151.22 By MS/MS 5 0 1 1 803330 803330 0 12806 2851 13580 32596 26060 26060 1 8056.9 0 SSLEGPTILDIEK ESLIADKSGSKKTLRSSLEGPTILDIEKFH LRSSLEGPTILDIEKFHRESFFYTHLINFS R S S E K F 0 0 0 1 0 0 2 1 0 2 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1400.7399 Q7L576 Q7L576 582 594 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 6.3659E-05 177.44 By MS/MS 3.5 0.5 1 1 2 386400 386400 0 12807 1763 13581 32597;32598 26061;26062 26062 2 22025 0 SSLFELAK VAVILTVPVLFFTVRSSLFELAKKTKFNLC VLFFTVRSSLFELAKKTKFNLCRHTVVTCI R S S A K K 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 8 0 893.48583 Q9H2H9 Q9H2H9 377 384 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes yes 2 0.013368 113.41 By MS/MS 3.5 1.12 1 1 1 1 4 604770 604770 0 12808 2430 13582 32599;32600;32601;32602 26063;26064;26065 26065 3 20592 0 SSLGPVGLDK SQNVMAAASIANIVKSSLGPVGLDKMLVDD ANIVKSSLGPVGLDKMLVDDIGDVTITNDG K S S D K M 0 0 0 1 0 0 0 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 10 0 971.52876 P17987 P17987 34 43 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.019865 86.882 By MS/MS By matching 7.29 1.67 1 2 1 1 1 1 6 1 43015000 42857000 157620 12809 648 13583 32603;32604;32605;32606;32607;32608;32609 26066;26067;26068 26067 3 336990 161510 SSLGSLQTPEAVTTR ARRKTVFSPTLPAARSSLGSLQTPEAVTTR SSLGSLQTPEAVTTRKGTGLLSSDYRIING R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 Q7Z2W4 Q7Z2W4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.000268 191.79 By MS/MS By MS/MS 5.2 1.17 2 1 1 1 4 1 15220000 15160000 59289 12810 1778 13584 32610;32611;32612;32613;32614 26069;26070;26071;26072 26070 4 1005000 126320 SSLLLGFR FLKSNTLPISLQSIRSSLLLGFRRSMNINL ISLQSIRSSLLLGFRRSMNINLWSEITELL R S S F R R 0 1 0 0 0 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 8 0 891.5178 P42704 P42704 542 549 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0053896 123.69 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 9060900 9060900 0 12811 886 13585 32615;32616;32617;32618;32619;32620 26073;26074;26075 26074 3 310640 0 SSLNPILFR ADTENLLKAPTIVGKSSLNPILFRGVGMVA PTIVGKSSLNPILFRGVGMVADPDNPLVLD K S S F R G 0 1 1 0 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 9 0 1045.592 P39656 P39656 190 198 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.00025866 154.12 By MS/MS By MS/MS 5.8 2.75 1 1 1 1 2 1 1 1 1 9 1 39239000 39126000 112910 12812 855 13586 32621;32622;32623;32624;32625;32626;32627;32628;32629;32630 26076;26077;26078;26079;26080;26081;26082 26080 7 457300 115700 SSLNSQQPTEEKETK LKFHPELSKEHAPIRSSLNSQQPTEEKETK SSLNSQQPTEEKETKLKNRHSLEISSALNM R S S T K L 0 0 1 0 0 2 3 0 0 0 1 2 0 0 1 3 2 0 0 0 0 0 15 1 1704.8166 O75592 O75592 3070 3084 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 3 0.046697 62.081 By MS/MS 2 0 1 1 153860 153860 0 12813 335 13587 32631 26083 26083 1 52042 0 SSLQSQCLNEVLK DLCSRVTFVNFTVTRSSLQSQCLNEVLKAE TRSSLQSQCLNEVLKAERPDVDEKRSDLLK R S S L K A 0 0 1 0 1 2 1 0 0 0 3 1 0 0 0 3 0 0 0 1 0 0 13 0 1504.7555 Q14204 Q14204 3706 3718 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.3995E-11 259.18 By MS/MS 2.5 1.12 1 1 1 1 4 4626300 4626300 0 12814 1433 13588 32632;32633;32634;32635 26084;26085;26086;26087 26087 4 1023200 0 SSLSEYAFR ______________________________ ______________________________ M S S F R M 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 3 0 0 1 0 0 0 9 0 1058.5033 Q9Y291 Q9Y291 2 10 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 0.0020031 124.08 By MS/MS By matching 10 0 2 1 1 2693900 2655000 38846 12815 2821 13589 32636;32637 26088 26088 1 143100 49733 SSLTLATAINQR EWLKTVNESHGSVERSSLTLATAINQRGIY VERSSLTLATAINQRGIYVIQAPKGGQKIS R S S Q R G 2 1 1 0 0 1 0 0 0 1 2 0 0 0 0 2 2 0 0 0 0 0 12 0 1273.699 Q63HN8 Q63HN8 1532 1543 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0039542 106.62 By MS/MS 1.5 0.5 1 1 2 225400 225400 0 12816 1664 13590 32638;32639 26089 26089 1 63331 0 SSLVNLLSR SGVHVVVTGPPNAGKSSLVNLLSRKPVSIV PPNAGKSSLVNLLSRKPVSIVSPEPGTTRD K S S S R K 0 1 1 0 0 0 0 0 0 0 3 0 0 0 0 3 0 0 0 1 0 0 9 0 987.57129 Q969Y2 Q969Y2 263 271 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 9.6162E-05 162.88 By MS/MS 7 0.816 1 1 1 3 3039600 3039600 0 12817 2098 13591 32640;32641;32642 26090;26091;26092 26092 3 33752 0 SSMNPEYDYLFK ______________________________ ______________________________ M S S F K L 0 0 1 1 0 0 1 0 0 0 1 1 1 1 1 2 0 0 2 0 0 0 12 0 1492.6544 P62820 P62820 2 13 RAB1A Ras-related protein Rab-1A yes yes 2 0.00054517 120.06 By MS/MS 9 0 2 2 171040 171040 0 12818 1171 13592;13593 32643;32644 26093;26094 26093 670 2 3366 0 SSMNVDEAFSSLAR LAREHGIRFFETSAKSSMNVDEAFSSLARD KSSMNVDEAFSSLARDILLKSGGRRSGNGN K S S A R D 2 1 1 1 0 0 1 0 0 0 1 0 1 1 0 4 0 0 0 1 0 0 14 0 1512.6879 P51153 P51153 154 167 RAB13 Ras-related protein Rab-13 yes yes 2 1.0634E-11 244.73 By MS/MS 9 0 1 1 709170 709170 0 12819 992 13594 32645 26095 26095 550 1 13957 0 SSMSVTSLEAELQAK LVFATPLCCALFPQKSSMSVTSLEAELQAK SSMSVTSLEAELQAKIQESHPELRRVYFNK K S S A K I 2 0 0 0 0 1 2 0 0 0 2 1 1 0 0 4 1 0 0 1 0 0 15 0 1579.7763 Q9H9B4 Q9H9B4 291 305 SFXN1 Sideroflexin-1 yes yes 2 1.1762E-32 294.01 By MS/MS 8 0 1 1 3835800 3835800 0 12820 2485 13595 32646 26096 26096 1102 1 48427 0 SSNECFKCGR ______________________________ ______________________________ M S S G R S 0 1 1 0 2 0 1 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 10 1 1243.5074 P62633 P62633 2 11 CNBP Cellular nucleic acid-binding protein yes yes 2 2.6885E-05 162.88 By MS/MS By matching 9.33 0.471 2 1 2 1 1062400 1046100 16336 12821 1163 13596 32647;32648;32649 26097 26097 1 32674 37250 SSPDMLYQYLK PANSFQLESDFRQLKSSPDMLYQYLKQIEP RQLKSSPDMLYQYLKQIEPSLYPKLFQKNL K S S L K Q 0 0 0 1 0 1 0 0 0 0 2 1 1 0 1 2 0 0 2 0 0 0 11 0 1343.6431 Q9H6T3 Q9H6T3 561 571 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.0010989 119.62 By MS/MS 5 0 1 1 401170 401170 0 12822 2459 13597 32650 26098 26098 1 4023.6 0 SSPEPVALTESETEYVIR LAAVPEFRGLGPLFKSSPEPVALTESETEY EPVALTESETEYVIRCTKHTFTNHMVFQFD K S S I R C 1 1 0 0 0 0 4 0 0 1 1 0 0 0 2 3 2 0 1 2 0 0 18 0 2005.9844 Q9Y678 Q9Y678 632 649 COPG1 Coatomer subunit gamma-1 yes yes 2;3 9.0784E-17 289.38 By MS/MS 4.75 0.829 2 1 1 4 15286000 15286000 0 12823 2933 13598 32651;32652;32653;32654 26099;26100;26101 26099 3 1273700 0 SSPEVSSINQEALVLTAK RLISLPLSRIRVIMKSSPEVSSINQEALVL EVSSINQEALVLTAKATELFVQCLATYSYR K S S A K A 2 0 1 0 0 1 2 0 0 1 2 1 0 0 1 4 1 0 0 2 0 0 18 0 1871.984 Q9NRG0 Q9NRG0 30 47 CHRAC1 Chromatin accessibility complex protein 1 yes yes 2 0.000503 142.95 By MS/MS 10 0 1 1 107400 107400 0 12824 2551 13599 32655 26102 26102 1 5788.4 0 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR NQDKKNGAAKQSNPKSSPGQPEAGPEGAQE PAVEAEGPGSSQAPRKPEGAQARTAQSGAL K S S P R K 7 2 0 0 0 4 5 5 0 0 0 0 0 0 7 5 0 0 0 1 0 0 36 1 3483.6251 P40222 P40222 18 53 TXLNA Alpha-taxilin yes yes 4 8.1867E-07 86.785 By MS/MS 5 0 1 1 1852500 1852500 0 12825 857 13600 32656 26103 26103 1 18579 0 SSPLVNAALEGK LQQRYTLPNGDTAWRSSPLVNAALEGKLVL AWRSSPLVNAALEGKLVLLDGIHRVNAGTL R S S G K L 2 0 1 0 0 0 1 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1184.6401 A3KMH1 A3KMH1 498 509 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00079385 129 By MS/MS By matching 1.5 0.5 1 1 1 1 533210 502180 31022 12826 14 13601 32657;32658 26104 26104 1 169860 31022 SSPPSIAPLALDSADLSEEK VLHTYQDHLWRSGNKSSPPSIAPLALDSAD IAPLALDSADLSEEKGSVQMDSTLQGDMRH K S S E K G 3 0 0 2 0 0 2 0 0 1 3 1 0 0 3 5 0 0 0 0 0 0 20 0 2026.0106 P41214 P41214 183 202 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 3.1856E-05 160.63 By MS/MS 5 0 1 1 572460 572460 0 12827 867 13602 32659 26105 26105 1 5741.5 0 SSPSGPSNPSNPSVEEK VAVYFMTGPMGFYWRSSPSGPSNPSNPSVE PSGPSNPSNPSVEEKLEHLEKQVRLLNIRL R S S E K L 0 0 2 0 0 0 2 1 0 0 0 1 0 0 4 6 0 0 0 1 0 0 17 0 1698.7697 Q8WY22 Q8WY22 207 223 BRI3BP BRI3-binding protein yes yes 2 4.8067E-05 196.37 By MS/MS 9 0 1 1 1809100 1809100 0 12828 2042 13603 32660 26106 26106 1 35603 0 SSPVEFECINEK GTFQTTMTKLKEASRSSPVEFECINEKKRQ ASRSSPVEFECINEKKRQKKKSYKNSGVIS R S S E K K 0 0 1 0 1 0 3 0 0 1 0 1 0 1 1 2 0 0 0 1 0 0 12 0 1437.6446 O75131 O75131 242 253 CPNE3 Copine-3 yes yes 2 1.8857E-12 230.95 By MS/MS By matching 6.75 0.829 2 1 1 3 1 8107100 8067000 40121 12829 294 13604 32661;32662;32663;32664 26107 26107 1 69222 41113 SSPVVNDGVVR NNEDVDALMKSLQVKSSPVVNDGVVRLRGL LQVKSSPVVNDGVVRLRGLPYSCNEKDIVD K S S V R L 0 1 1 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 4 0 0 11 0 1127.5935 Q12849 Q12849 243 253 GRSF1 G-rich sequence factor 1 yes yes 2 0.0059597 101.38 By MS/MS By matching 6 0 2 1 1 4458000 4359800 98252 12830 1334 13605 32665;32666 26108 26108 1 29970 100680 SSQALNEDIVR ALMQEKTGLESKRLRSSQALNEDIVRVSSR KRLRSSQALNEDIVRVSSRLEHLEKELSEK R S S V R V 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 11 0 1230.6204 Q2M1P5 Q2M1P5 963 973 KIF7 Kinesin-like protein KIF7 yes yes 2 0.00014866 147.62 By MS/MS 3 0 1 1 1238400 1238400 0 12831 1566 13606 32667 26109 26109 1 22659 0 SSQFGSLEF NDRIGYKPQPKPNNRSSQFGSLEF______ PKPNNRSSQFGSLEF_______________ R S S E F - 0 0 0 0 0 1 1 1 0 0 1 0 0 2 0 3 0 0 0 0 0 0 9 0 1000.4502 Q8NHZ8 Q8NHZ8 77 85 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 2 0.00066895 141.52 By MS/MS 10 0 1 1 79756 79756 0 12832 1970 13607 32668 26110 26110 1 4298.5 0 SSQGDSGVDLSAESR AFSSTETGSAEQGFKSSQGDSGVDLSAESR SSQGDSGVDLSAESRESSATSSQRSSPYGT K S S S R E 1 1 0 2 0 1 1 2 0 0 1 0 0 0 0 5 0 0 0 1 0 0 15 0 1493.6594 Q5JSZ5 Q5JSZ5 1666 1680 PRRC2B Protein PRRC2B yes yes 2 9.4914E-05 183.06 By MS/MS 1 0 1 1 128640 128640 0 12833 1609 13608 32669 26111;26112 26112 2 30999 0 SSQGTSYDSYR HLLREWGEELQAVLRSSQGTSYDSYRLCDS AVLRSSQGTSYDSYRLCDSLTSFSQNATLY R S S Y R L 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 4 1 0 2 0 0 0 11 0 1249.5211 P57678 P57678 337 347 GEMIN4 Gem-associated protein 4 yes yes 2 0.00012216 149.94 By MS/MS 4 0 1 1 706730 706730 0 12834 1079 13609 32670 26113 26113 1 66508 0 SSQPTQPEPR DLTCLIDTNFSAQPRSSQPTQPEPRHRAVC SAQPRSSQPTQPEPRHRAVCGRSRDSPGYD R S S P R H 0 1 0 0 0 2 1 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 10 0 1125.5415 Q12770 Q12770 887 896 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes yes 2 0.0012272 119.22 By MS/MS 1.5 0.5 1 1 2 147140 147140 0 12835 1327 13610 32671;32672 26114 26114 1 42199 0 SSQQEFQEVFNR LDGVGLKTIERRGSKSSQQEFQEVFNRSVM GSKSSQQEFQEVFNRSVMIIAATNRPDVLD K S S N R S 0 1 1 0 0 3 2 0 0 0 0 0 0 2 0 2 0 0 0 1 0 0 12 0 1497.6848 Q9BVQ7 Q9BVQ7 609 620 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 1.8857E-12 230.95 By MS/MS 5 0 1 1 834210 834210 0 12836 2338 13611 32673 26115 26115 1 8366.7 0 SSQSSSQQFSGIGR GAGTYGASSTTSTGRSSQSSSQQFSGIGRS RSSQSSSQQFSGIGRSGQQPQPLMSQQFAQ R S S G R S 0 1 0 0 0 3 0 2 0 1 0 0 0 1 0 6 0 0 0 0 0 0 14 0 1454.675 Q92841 Q92841 671 684 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 4.2186E-11 234.49 By MS/MS 5 0 1 1 2154400 2154400 0 12837 2073 13612 32674 26116 26116 1 21608 0 SSQSSTLSHSNR VQEQVMMTVKRQKSKSSQSSTLSHSNRGSM KSKSSQSSTLSHSNRGSMYDGLADNYNYGT K S S N R G 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 6 1 0 0 0 0 0 12 0 1289.596 Q13835 Q13835 56 67 PKP1 Plakophilin-1 yes yes 2 0.036233 89.356 By MS/MS 3 0 1 1 74676 0 74676 12838 1410 13613 32675 26117 26117 1 0 9505.2 SSQTSGTNEQSSAIVSAR QSQLTEKDSMIENMKSSQTSGTNEQSSAIV TSGTNEQSSAIVSARDSEQVAELKQELATL K S S A R D 2 1 1 0 0 2 1 1 0 1 0 0 0 0 0 6 2 0 0 1 0 0 18 0 1808.85 O60763 O60763 765 782 USO1 General vesicular transport factor p115 yes yes 2 7.5091E-12 245.39 By MS/MS 4 0 1 1 655330 655330 0 12839 276 13614 32676 26118 26118 1 61671 0 SSSDHHFNQTIGSASPSTAR GLSSLGGTASIGHMRSSSDHHFNQTIGSAS HFNQTIGSASPSTARSRITKYSTVQYSK__ R S S A R S 2 1 1 1 0 1 0 1 2 1 0 0 0 1 1 6 2 0 0 0 0 0 20 0 2085.9464 Q02413 Q02413 1017 1036 DSG1 Desmoglein-1 yes yes 3 0.025248 74.812 By MS/MS 3 0 1 1 111860 0 111860 12840 1277 13615 32677 26119 26119 0 0 14239 SSSDNNTNTLGR NIARTNATNNMNLSRSSSDNNTNTLGRNVM LSRSSSDNNTNTLGRNVMSTATSPLMGAQS R S S G R N 0 1 3 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 0 0 0 12 0 1264.5644 Q9ULT8 Q9ULT8 1569 1580 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 5.0916E-06 187.42 By MS/MS 2 0.816 1 1 1 3 829190 829190 0 12841 2774 13616 32678;32679;32680 26120;26121 26121 2 187180 0 SSSGFVGLR ALTKEFDYLPPVDSRSSSGFVGLRNGGATC PPVDSRSSSGFVGLRNGGATCYMNAVFQQL R S S L R N 0 1 0 0 0 0 0 2 0 0 1 0 0 1 0 3 0 0 0 1 0 0 9 0 908.47158 Q9UPU5 Q9UPU5 1684 1692 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0066339 106.36 By MS/MS 2 0.816 1 1 1 3 557610 557610 0 12842 2802 13617 32681;32682;32683 26122 26122 1 156400 0 SSSGLLEWESK KRPSSVKVFSGKSERSSSGLLEWESKSDAL KSERSSSGLLEWESKSDALETLGFLNHYQM R S S S K S 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 4 0 1 0 0 0 0 11 0 1221.5877 P14866 P14866 542 552 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 2 0.0032912 108.43 By MS/MS 6 0 1 1 1268000 1268000 0 12843 619 13618 32684 26123 26123 1 8716.7 0 SSSGLNSEKVAALIQK ______________________________ SSGLNSEKVAALIQKLNSDPQFVLAQNVGT M S S Q K L 2 0 1 0 0 1 1 1 0 1 2 2 0 0 0 4 0 0 0 1 0 0 16 1 1630.889 Q13867 Q13867 2 17 BLMH Bleomycin hydrolase yes yes 2 1.3283E-22 231.74 By MS/MS 3 0 1 1 635100 0 635100 12844 1411 13619 32685 26124 26124 1 0 80840 SSSGSSSSYGQHGSGSR HGSRSGQSSRGERHRSSSGSSSSYGQHGSG SGSSSSYGQHGSGSRQSLGHGRQGSGSRQS R S S S R Q 0 1 0 0 0 1 0 4 1 0 0 0 0 0 0 9 0 0 1 0 0 0 17 0 1613.6666 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 275 291 HRNR Hornerin yes no 2;3 1.1003E-23 209.11 By MS/MS By MS/MS 4.33 2.79 4 2 2 2 2 2 1 1 1 1 6 12 7117000 1110200 6006800 + 12845 73 13620 32686;32687;32688;32689;32690;32691;32692;32693;32694;32695;32696;32697;32698;32699;32700;32701;32702;32703 26125;26126;26127;26128;26129;26130;26131;26132;26133;26134;26135;26136;26137;26138;26139;26140;26141;26142 26128 18 109930 2347100 SSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQR DRTPFHTSLHQGTSKSSSLPAYGRTTLSRL SETGSPGLQNGEGQRGRMDRGNSLPCVLEQ K S S Q R G 1 3 1 0 0 3 3 6 0 0 4 0 0 1 3 9 4 0 1 0 0 0 39 2 4025.9315 Q08495 Q08495 287 325 DMTN Dematin yes yes 6 0.051623 6.9752 By MS/MS 2 0 1 1 166350 0 166350 12846 1310 13621 32704 26143 26143 0 0 235250 SSSPAPADIAQTVQEDLR PEPVLEETAPEDAQKSSSPAPADIAQTVQE PAPADIAQTVQEDLRTFSWASVTSKNLPPS K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 5.2614E-11 227.74 By MS/MS 5 0 1 1 1614000 1614000 0 12847 1368 13622 32705 26144 26144 1 16188 0 SSSQIPAQPSVAK NNENKKETDEVSNTKSSSQIPAQPSVAKVP TKSSSQIPAQPSVAKVPYGKGPSFNQERGT K S S A K V 2 0 0 0 0 2 0 0 0 1 0 1 0 0 2 4 0 0 0 1 0 0 13 0 1298.683 Q9Y520 Q9Y520 375 387 PRRC2C Protein PRRC2C yes yes 2 0.00041156 140.78 By MS/MS 2.5 1.12 1 1 1 1 4 3486100 3486100 0 12848 2905 13623 32706;32707;32708;32709 26145;26146;26147;26148 26145 4 748830 0 SSSRGPYESGSGHSSGLGHQESR RQSSSYGPHGYGSGRSSSRGPYESGSGHSS SGSGHSSGLGHQESRSGQSSGYGQHGSSSG R S S S R S 0 2 0 0 0 1 2 5 2 0 1 0 0 0 1 8 0 0 1 0 0 0 23 1 2345.0381 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 568 590 HRNR Hornerin yes no 3;4 6.1314E-13 172.34 By MS/MS By MS/MS 3.6 1.91 2 1 2 2 1 1 1 4 6 8722100 1700800 7021400 + 12849 73 13624 32710;32711;32712;32713;32714;32715;32716;32717;32718;32719 26149;26150;26151;26152;26153;26154;26155;26156;26157;26158;26159 26152 11 89264 1667900 SSSRGPYESR GHSSSHGQHGSGSGRSSSRGPYESRSGHSS SGSGRSSSRGPYESRSGHSSVFGQHESGSG R S S S R S 0 2 0 0 0 0 1 1 0 0 0 0 0 0 1 4 0 0 1 0 0 0 10 1 1124.521 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1268 1277 HRNR Hornerin yes no 2;3 0.015394 102.52 By MS/MS By MS/MS 5.43 2.56 1 1 2 1 2 2 2 1 1 1 6 8 11262000 2261800 9000200 + 12850 73 13625 32720;32721;32722;32723;32724;32725;32726;32727;32728;32729;32730;32731;32732;32733 26160;26161;26162;26163;26164;26165;26166 26160 7 37324 6198700 SSSSGSVGESSSK SGGGYGGGSSSGGHKSSSSGSVGESSSKGP HKSSSSGSVGESSSKGPRY___________ K S S S K G 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 8 0 0 0 1 0 0 13 0 1184.5157 CON__P13645;P13645 CON__P13645 577 589 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.2123E-11 238.01 By MS/MS By MS/MS 5.2 3.54 2 1 1 1 3 2 1057000 854350 202640 + 12851 50 13626 32734;32735;32736;32737;32738 26167;26168;26169;26170 26169 4 61730 86527 SSSSGSVGESSSKGPR SGGGYGGGSSSGGHKSSSSGSVGESSSKGP SSSGSVGESSSKGPRY______________ K S S P R Y 0 1 0 0 0 0 1 3 0 0 0 1 0 0 1 8 0 0 0 1 0 0 16 1 1494.691 CON__P13645;P13645 CON__P13645 577 592 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 7.7096E-10 196.02 By MS/MS By MS/MS 3.72 2.05 3 3 3 3 2 2 1 1 6 12 23641000 3174900 20466000 + 12852 50 13627 32739;32740;32741;32742;32743;32744;32745;32746;32747;32748;32749;32750;32751;32752;32753;32754;32755;32756 26171;26172;26173;26174;26175;26176;26177;26178;26179;26180;26181 26174 11 230700 17680000 SSSSQHPEQTGR NKQPSSEPEWTPEPRSSSSQHPEQTGRTRR EPRSSSSQHPEQTGRTRRSGPIKKPVLKAL R S S G R T 0 1 0 0 0 2 1 1 1 0 0 0 0 0 1 4 1 0 0 0 0 0 12 0 1299.5804 Q5JSZ5 Q5JSZ5 924 935 PRRC2B Protein PRRC2B yes yes 2 0.0022741 111.52 By MS/MS 2 0.816 1 1 1 3 159850 159850 0 12853 1609 13628 32757;32758;32759 26182 26182 1 45854 0 SSTDFSELEQPR GKNVESTNSNAYTQRSSTDFSELEQPRSCL TQRSSTDFSELEQPRSCLFEQGTRRVGPSS R S S P R S 0 1 0 1 0 1 2 0 0 0 1 0 0 1 1 3 1 0 0 0 0 0 12 0 1394.6314 Q86V48 Q86V48 956 967 LUZP1 Leucine zipper protein 1 yes yes 2 0.00027711 145.46 By MS/MS 3 0 1 1 396470 396470 0 12854 1827 13629 32760 26183 26183 1 7254.4 0 SSTGPEPPAPTPLLAER KKEKSATRPSPSPERSSTGPEPPAPTPLLA TGPEPPAPTPLLAERHGGSPQPLATTPLSQ R S S E R H 2 1 0 0 0 0 2 1 0 0 2 0 0 0 5 2 2 0 0 0 0 0 17 0 1718.8839 Q9UQ35 Q9UQ35 357 373 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00030698 112.08 By MS/MS 1 0 1 1 112650 112650 0 12855 2804 13630 32761 26184 26184 1 27145 0 SSTNLSEFVMR INLEEVGTICLGFFKSSTNLSEFVMRKIGD GFFKSSTNLSEFVMRKIGDLACANIQHLSS K S S M R K 0 1 1 0 0 0 1 0 0 0 1 0 1 1 0 3 1 0 0 1 0 0 11 0 1269.6023 Q7L8L6 Q7L8L6 328 338 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.00070047 138.25 By MS/MS 5 0 1 1 707830 707830 0 12856 1771 13631 32762 26185 26185 1 7099.2 0 SSTPLPTISSSAENTR EKKLLKLREQGTESRSSTPLPTISSSAENT STPLPTISSSAENTRQNGSNDSDRYSDNEE R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 P42166;P42167 P42166 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 2.9254E-05 149.57 By MS/MS By MS/MS 5.8 0.748 2 2 1 3 2 12788000 12551000 237500 12857 875;876 13632 32763;32764;32765;32766;32767 26186;26187;26188;26189 26186 4 111070 234680 SSTSEGLLLK RPLNLGPFVVRAFLRSSTSEGLLLKIDPLL RAFLRSSTSEGLLLKIDPLLPKEVKNEESE R S S L K I 0 0 0 0 0 0 1 1 0 0 3 1 0 0 0 3 1 0 0 0 0 0 10 0 1033.5655 Q9BYD6 Q9BYD6 297 306 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 7.5662E-05 155.58 By MS/MS 7.5 0.5 1 1 2 2563400 2563400 0 12858 2371 13633 32768;32769 26190 26190 1 34198 0 SSTVTEAPIAVVTSR EEKVTLLNAPTKRPRSSTVTEAPIAVVTSR SSTVTEAPIAVVTSRTSEVYVWGGGKSTPQ R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.00020865 176.32 By MS/MS 3.25 1.48 1 1 1 1 4 3859900 3859900 0 12859 1995 13634 32770;32771;32772;32773 26191;26192;26193 26193 3 311660 0 SSVAVLTQESFAEHR ______________________________ SSVAVLTQESFAEHRSGLVPQQIKVATLNS M S S H R S 2 1 0 0 0 1 2 0 1 0 1 0 0 1 0 3 1 0 0 2 0 0 15 0 1659.8216 Q00341 Q00341 2 16 HDLBP Vigilin yes yes 2 5.4843E-24 282.05 By MS/MS 4.67 2.49 1 1 1 1 1 1 6 4993200 4993200 0 12860 1260 13635 32774;32775;32776;32777;32778;32779 26194;26195;26196;26197;26198 26195 5 230990 0 SSVLENFVGR DLPQIAVVGGQSAGKSSVLENFVGRDFLPR QSAGKSSVLENFVGRDFLPRGSGIVTRRPL K S S G R D 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 10 0 1106.572 P50570;Q05193;Q9UQ16 P50570 45 54 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 yes no 2 0.015418 89.029 By MS/MS 4 0 1 1 484960 484960 0 12861 977 13636 32780 26199 26199 1 45638 0 SSVLESLVGR QLPQIVVVGTQSSGKSSVLESLVGRDLLPR QSSGKSSVLESLVGRDLLPRGTGIVTRRPL K S S G R D 0 1 0 0 0 0 1 1 0 0 2 0 0 0 0 3 0 0 0 2 0 0 10 0 1045.5768 O00429 O00429 39 48 DNM1L Dynamin-1-like protein yes yes 2 0.00035545 136.57 By MS/MS 5 0 1 1 1228100 1228100 0 12862 105 13637 32781 26200 26200 1 12317 0 SSVLIAQQTDTSDPEK LAFPSPEKLLRLGPKSSVLIAQQTDTSDPE SVLIAQQTDTSDPEKVVSAFLKVSSVFKDE K S S E K V 1 0 0 2 0 2 1 0 0 1 1 1 0 0 1 3 2 0 0 1 0 0 16 0 1717.837 P46060 P46060 453 468 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 3.8145E-33 304.93 By MS/MS 5 0 1 1 1680400 1680400 0 12863 908 13638 32782 26201;26202 26201 2 16854 0 SSVLQVSVLQSTK KLVLYPSAQEKVLQRSSVLQVSVLQSTKDS QRSSVLQVSVLQSTKDSSKRICVANTHLYW R S S T K D 0 0 0 0 0 2 0 0 0 0 2 1 0 0 0 4 1 0 0 3 0 0 13 0 1374.7718 Q6L8Q7 Q6L8Q7 432 444 PDE12 2,5-phosphodiesterase 12 yes yes 2 1.8531E-11 232.56 By MS/MS 5 0 1 1 1783200 1783200 0 12864 1686 13639 32783 26203 26203 1 17885 0 SSVQEECVSTISSSK PSEELELDKWKTTMKSSVQEECVSTISSSK SSVQEECVSTISSSKDEDPLAATREFIEMW K S S S K D 0 0 0 0 1 1 2 0 0 1 0 1 0 0 0 6 1 0 0 2 0 0 15 0 1626.7407 Q7L0Y3 Q7L0Y3 72 86 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 8.7861E-08 222.81 By MS/MS 7 0 1 1 1896400 1896400 0 12865 1759 13640 32784 26204 26204 1 29770 0 SSVQEECVSTISSSKDEDPLAATR PSEELELDKWKTTMKSSVQEECVSTISSSK TISSSKDEDPLAATREFIEMWRLLGREVPE K S S T R E 2 1 0 2 1 1 3 0 0 1 1 1 0 0 1 6 2 0 0 2 0 0 24 1 2595.197 Q7L0Y3 Q7L0Y3 72 95 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 3.8006E-09 184.34 By MS/MS 7 0 1 1 5842100 5842100 0 12866 1759 13641 32785 26205;26206 26205 2 91711 0 SSVSEGIR SVPLGQLREEVLSLRSSVSEGIRAVDERMS EEVLSLRSSVSEGIRAVDERMSKQEDIRKK R S S I R A 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 8 0 833.4243 Q14746 Q14746 104 111 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 2 0.0076078 113.41 By MS/MS 5 0 1 1 884680 884680 0 12867 1457 13642 32786 26207 26207 1 8872.9 0 SSVTHLLCASK MAVTLTVPVVIFPIRSSVTHLLCASKDFSW FPIRSSVTHLLCASKDFSWWRHSLITVSIL R S S S K D 1 0 0 0 1 0 0 0 1 0 2 1 0 0 0 3 1 0 0 1 0 0 11 0 1201.6125 Q96QD8 Q96QD8 396 406 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes yes 2 0.0096808 91.549 By MS/MS 2 0.816 1 1 1 3 464540 464540 0 12868 2215 13643 32787;32788;32789 26208 26208 1 102170 0 SSYLEYQK EEEITPTIQKLKEERSSYLEYQKVMREIEH QKLKEERSSYLEYQKVMREIEHLSRLYIAY R S S Q K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 8 0 1016.4815 O95347 O95347 215 222 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0007823 155 By MS/MS 3 0 1 1 1114400 1114400 0 12869 405 13644 32790 26209 26209 1 20390 0 SSYSRFSSSGGGGGGGR GGGGGGGLGSGGSIRSSYSRFSSSGGGGGG YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC R S S G R F 0 2 0 0 0 0 0 7 0 0 0 0 0 1 0 6 0 0 1 0 0 0 17 1 1561.6869 P35527 P35527 30 46 KRT9 Keratin, type I cytoskeletal 9 yes yes 3 0.011148 147.7 By matching By MS/MS 4 2.9 1 2 1 1 1 4 976910 95948 880960 + 12870 822 13645 32791;32792;32793;32794;32795 26210;26211;26212 26210 3 32454 1099300 STAALEEDAQILK KPERKPSDEEFASRKSTAALEEDAQILKVI RKSTAALEEDAQILKVIEAYCTSAKTRQTL K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 Q14155;Q15052 Q14155 703 715 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 no no 2 6.3257E-18 242.97 By MS/MS 5 0 1 1 0 0 0 12871 1423;1483 13646 32796 26213 26213 1 0 0 STACQMLVCYAK DQQSFGIKTAGLEEKSTACQMLVCYAKELK EEKSTACQMLVCYAKELKEGFVEYTEQVVK K S T A K E 2 0 0 0 2 1 0 0 0 0 1 1 1 0 0 1 1 0 1 1 0 0 12 0 1430.6356 O00410 O00410 679 690 IPO5 Importin-5 yes yes 2 3.1528E-05 173.24 By MS/MS 4.5 0.5 1 1 2 1476000 1476000 0 12872 103 13647 32797;32798 26214 26214 1 113010 0 STAFQLVELGPGR LLGIWFISEWMATGKSTAFQLVELGPGRGT GKSTAFQLVELGPGRGTLVGDILRVFTQLG K S T G R G 1 1 0 0 0 1 1 2 0 0 2 0 0 1 1 1 1 0 0 1 0 0 13 0 1373.7303 Q7L592 Q7L592 115 127 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.0013087 120.55 By MS/MS 7 0 1 1 391350 391350 0 12873 1764 13648 32799 26215 26215 1 6143.6 0 STAGDTHLGGEDFDNR DVSILTIEDGIFEVKSTAGDTHLGGEDFDN TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 P11142;P54652 P11142 221 236 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 3.1123E-15 184.87 By MS/MS By MS/MS 5.88 1.05 4 2 1 1 7 1 111690000 111080000 613690 12874 572 13649 32800;32801;32802;32803;32804;32805;32806;32807 26216;26217;26218;26219 26218 3 1084600 515370 STAGNFLVNPLEPK EQEQEHNGPLDNKGKSTAGNFLVNPLEPKN KSTAGNFLVNPLEPKNAEKLKVKIADLGNA K S T P K N 1 0 2 0 0 0 1 1 0 0 2 1 0 1 2 1 1 0 0 1 0 0 14 0 1485.7827 Q96SB4 Q96SB4 473 486 SRPK1 SRSF protein kinase 1 yes yes 2 0.0015613 132.5 By MS/MS 4 0 1 1 1036700 1036700 0 12875 2233 13650 32808 26220 26220 1 97560 0 STAIFFYCDR MNFTGGDTCHKVYQRSTAIFFYCDRGTQRP KVYQRSTAIFFYCDRGTQRPVFLKETSDCS R S T D R G 1 1 0 1 1 0 0 0 0 1 0 0 0 2 0 1 1 0 1 0 0 0 10 0 1278.5703 P11717 P11717 1326 1335 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00012433 152.28 By MS/MS 2 0.816 1 1 1 3 865450 865450 0 12876 583 13651 32809;32810;32811 26221;26222;26223 26221 3 252120 0 STCIYGGAPK VQQVAAEYCRACRLKSTCIYGGAPKGPQIR ACRLKSTCIYGGAPKGPQIRDLERGVEICI K S T P K G 1 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 1 0 0 0 10 0 1052.4961 P17844;Q92841 P17844 198 207 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.0014201 115.49 By MS/MS 5 0 1 1 1151300 1151300 0 12877 646;2073 13652 32812 26224 26224 1 11547 0 STDQTVLEELASIK LVHHGYCATAEAFARSTDQTVLEELASIKN RSTDQTVLEELASIKNRQRIQKLVLAGRMG R S T I K N 1 0 0 1 0 1 2 0 0 1 2 1 0 0 0 2 2 0 0 1 0 0 14 0 1532.7934 Q96S59 Q96S59 392 405 RANBP9 Ran-binding protein 9 yes yes 2 7.7757E-24 322.7 By MS/MS 5 0.816 1 1 1 3 1427900 1427900 0 12878 2232 13653 32813;32814;32815 26225;26226;26227 26225 3 98250 0 STDSCLFFIK RQGCKHLTQAVCTVKSTDSCLFFIKCFDDT VCTVKSTDSCLFFIKCFDDTIHGFRVPKNS K S T I K C 0 0 0 1 1 0 0 0 0 1 1 1 0 2 0 2 1 0 0 0 0 0 10 0 1216.5798 Q9BXW6 Q9BXW6 293 302 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 0.00050267 133.23 By MS/MS 4 0 1 1 370000 370000 0 12879 2360 13654 32816 26228 26228 1 34820 0 STDTGVSLPSYEEDQGSK ______________________________ TGVSLPSYEEDQGSKLIRKAKEAPFVPVGI M S T S K L 0 0 0 2 0 1 2 2 0 0 1 1 0 0 1 4 2 0 1 1 0 0 18 0 1898.8381 Q9Y241 Q9Y241 2 19 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 2 3.59E-05 196.11 By MS/MS 4.33 4.03 1 1 1 3 19743000 19743000 0 12880 2812 13655 32817;32818;32819 26229;26230;26231;26232 26229 4 1239800 0 STDTGVSLPSYEEDQGSKLIR ______________________________ SLPSYEEDQGSKLIRKAKEAPFVPVGIAGF M S T I R K 0 1 0 2 0 1 2 2 0 1 2 1 0 0 1 4 2 0 1 1 0 0 21 1 2281.1074 Q9Y241 Q9Y241 2 22 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 2;3 1.0005E-08 193.06 By MS/MS 10 0 2 2 12607000 12607000 0 12881 2812 13656 32820;32821 26233;26234 26234 2 679490 0 STDTGVSLPSYEEDQGSKLIRK ______________________________ LPSYEEDQGSKLIRKAKEAPFVPVGIAGFA M S T R K A 0 1 0 2 0 1 2 2 0 1 2 2 0 0 1 4 2 0 1 1 0 0 22 2 2409.2023 Q9Y241 Q9Y241 2 23 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 3 0.00011123 101.92 By MS/MS By matching 10 0 2 1 1 5793100 5754000 39086 12882 2812 13657 32822;32823 26235 26235 1 310120 50041 STDYGIFQINSR SGYNTRATNYNAGDRSTDYGIFQINSRYWC GDRSTDYGIFQINSRYWCNDGKTPGAVNAC R S T S R Y 0 1 1 1 0 1 0 1 0 2 0 0 0 1 0 2 1 0 1 0 0 0 12 0 1399.6732 P61626 P61626 69 80 LYZ Lysozyme C yes yes 2 7.1392E-20 238.86 By MS/MS By MS/MS 6.14 3.94 2 1 2 2 3 4 2196100 1140300 1055800 12883 1128 13658 32824;32825;32826;32827;32828;32829;32830 26236;26237;26238;26239;26240;26241;26242 26239 7 74674 1002800 STELIPR DYDQKRLFLGPYKGRSTELIPRLKGVLTNP FLGPYKGRSTELIPRLKGVLTNPNCEFEAN R S T P R L 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 7 0 814.45487 O60502 O60502 300 306 MGEA5 Protein O-GlcNAcase yes yes 2 0.03081 104.11 By MS/MS 3 0 1 1 841390 841390 0 12884 260 13659 32831 26243 26243 1 15395 0 STELLIR RPGTVALREIRRYQKSTELLIRKLPFQRLV REIRRYQKSTELLIRKLPFQRLVREIAQDF K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 Q71DI3;Q16695;P84243;P68431;Q6NXT2 Q71DI3 58 64 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.015682 120.65 By MS/MS By matching 10 0 2 1 1 1051300 992260 58989 12885 1215 13660 32832;32833 26244 26244 1 53479 75522 STEPELIQVK GAGLLQNYVDRTESRSTEPELIQVKSELPL RTESRSTEPELIQVKSELPLDPLPVPTEEG R S T V K S 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1142.6183 Q15758 Q15758 493 502 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 2.7558E-05 162.97 By MS/MS By MS/MS 5.55 2.74 1 1 1 1 1 2 1 1 1 1 10 1 24134000 24097000 37638 12886 1530 13661 32834;32835;32836;32837;32838;32839;32840;32841;32842;32843;32844 26245;26246;26247;26248;26249;26250;26251;26252;26253;26254;26255 26248 11 1273600 38568 STESLQANVQR ARTIGISVDPRRRNKSTESLQANVQRLKEY RRNKSTESLQANVQRLKEYRSKLILFPRKP K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1231.6157 P26373 P26373 106 116 RPL13 60S ribosomal protein L13 yes yes 2 9.8159E-10 221.68 By MS/MS 8.5 0.5 1 1 2 6360800 6360800 0 12887 731 13662 32845;32846 26256 26256 1 82665 0 STETALYR HAELSKLVKKHAAQRSTETALYRKMLGNPS KKHAAQRSTETALYRKMLGNPSRLPAKCPG R S T Y R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 1 0 0 0 8 0 939.46616 Q14318 Q14318 358 365 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.012568 107.9 By MS/MS 6 0 1 1 2112000 2112000 0 12888 1438 13663 32847 26257 26257 1 14519 0 STFVLDEFK AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE FAHLPKSTFVLDEFKRKYSNEDTLSVALPY K S T F K R 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 9 0 1084.5441 P26641 P26641 286 294 EEF1G Elongation factor 1-gamma yes yes 2 0.025226 86.67 By MS/MS 6.5 0.5 1 1 2 2998600 2998600 0 12889 736 13664 32848;32849 26258 26258 1 25111 0 STFVLDEFKR AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE AHLPKSTFVLDEFKRKYSNEDTLSVALPYF K S T K R K 0 1 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 10 1 1240.6452 P26641 P26641 286 295 EEF1G Elongation factor 1-gamma yes yes 2;3 0.0030505 125.71 By MS/MS 7.57 1.4 2 2 1 1 1 7 76841000 76841000 0 12890 736 13665 32850;32851;32852;32853;32854;32855;32856 26259;26260;26261;26262;26263 26261 5 677130 0 STGCDFAVSPK LIELWEGLTVDDVQKSTGCDFAVSPKLMPM DVQKSTGCDFAVSPKLMPMQQIAN______ K S T P K L 1 0 0 1 1 0 0 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 11 0 1167.523 P55809 P55809 501 511 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 0.0073919 97.597 By MS/MS 6 0 1 1 1911000 1911000 0 12891 1063 13666 32857 26264 26264 1 13137 0 STGEAFVQFASK IVPNGITLTMDYQGRSTGEAFVQFASKEIA QGRSTGEAFVQFASKEIAENALGKHKERIG R S T S K E 2 0 0 0 0 1 1 1 0 0 0 1 0 2 0 2 1 0 0 1 0 0 12 0 1270.6194 P31942 P31942 56 67 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 2 0.00046932 142.19 By MS/MS 7 0 1 1 1397800 1397800 0 12892 790 13667 32858 26265 26265 1 21944 0 STGEAFVQFASQEIAEK IVPNGITLPVDFQGRSTGEAFVQFASQEIA GEAFVQFASQEIAEKALKKHKERIGHRYIE R S T E K A 3 0 0 0 0 2 3 1 0 1 0 1 0 2 0 2 1 0 0 1 0 0 17 0 1840.8843 P31943;P55795 P31943 151 167 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2 4.7969E-24 272.77 By MS/MS 7 1 1 1 2 19880000 19880000 0 12893 791 13668 32859;32860 26266;26267 26267 2 138260 0 STGFETLVVTSEDGITK SLESSSQVEPGTDRKSTGFETLVVTSEDGI GFETLVVTSEDGITKIMFNRPKKKNAINTE K S T T K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 0 2 4 0 0 2 0 0 17 0 1782.8887 O75521 O75521 136 152 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 2 0.00012509 184.96 By MS/MS 7 0 1 1 258070 258070 0 12894 331 13669 32861 26268 26268 1 4051.2 0 STGGAPTFNVTVTK SLLQDGEFSMDLRTKSTGGAPTFNVTVTKT KSTGGAPTFNVTVTKTDKTLVLLMGKEGVH K S T T K T 1 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 4 0 0 2 0 0 14 0 1378.7092 P07737 P07737 92 105 PFN1 Profilin-1 yes yes 2 0.00041536 138.2 By MS/MS 10 0 1 1 7031700 7031700 0 12895 510 13670 32862 26269 26269 1 378980 0 STGGDFGNPLRK ______________________________ ______________________________ M S T R K F 0 1 1 1 0 0 0 3 0 0 1 1 0 1 1 1 1 0 0 0 0 0 12 1 1247.6258 P20340 P20340 2 13 RAB6A Ras-related protein Rab-6A yes yes 2 0.00095929 130.41 By MS/MS 8.5 0.5 1 1 2 2270500 2270500 0 12896 670 13671 32863;32864 26270;26271;26272 26270 3 40110 0 STGNFLTLTQAIDK RANGHLLLNSEKMSKSTGNFLTLTQAIDKF KSTGNFLTLTQAIDKFSADGMRLALADAGD K S T D K F 1 0 1 1 0 1 0 1 0 1 2 1 0 1 0 1 3 0 0 0 0 0 14 0 1507.7882 Q9P2J5 Q9P2J5 720 733 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 9.1554E-24 274.59 By MS/MS 4 0.816 1 1 1 3 506470 506470 0 12897 2684 13672 32865;32866;32867 26273;26274;26275 26275 3 32428 0 STGPTAATGSNR ______________________________ ______________________________ M S T N R R 2 1 1 0 0 0 0 2 0 0 0 0 0 0 1 2 3 0 0 0 0 0 12 0 1118.5316 Q15836 Q15836 2 13 VAMP3 Vesicle-associated membrane protein 3 yes yes 2 0.0014323 120.06 By MS/MS 10 0 1 1 278890 278890 0 12898 1537 13673 32868 26276 26276 1 15031 0 STGPTAATGSNRR ______________________________ ______________________________ M S T R R L 2 2 1 0 0 0 0 2 0 0 0 0 0 0 1 2 3 0 0 0 0 0 13 1 1274.6327 Q15836 Q15836 2 14 VAMP3 Vesicle-associated membrane protein 3 yes yes 2 0.0016007 92.239 By MS/MS By matching 10 0 2 1 1 2244500 2188700 55881 12899 1537 13674 32869;32870 26277 26277 1 117960 71544 STGSATSLASQGER LENETEISESGMTVRSTGSATSLASQGERR RSTGSATSLASQGERRRRTLPQLPNEEKSL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 Q5SW79 Q5SW79 627 640 CEP170 Centrosomal protein of 170 kDa yes yes 2 1.7917E-07 216.84 By MS/MS 2.5 1.12 1 1 1 1 4 4286900 4286900 0 12900 1623 13675 32871;32872;32873;32874 26278;26279 26278 2 989720 0 STGSFVGELMYK VYPIDLVKTRMQNQRSTGSFVGELMYKNSF NQRSTGSFVGELMYKNSFDCFKKVLRYEGF R S T Y K N 0 0 0 0 0 0 1 2 0 0 1 1 1 1 0 2 1 0 1 1 0 0 12 0 1317.6275 Q9UJS0 Q9UJS0 361 372 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 1.3326E-08 211.64 By MS/MS 5 0 2 2 7611400 7611400 0 12901 2748 13676;13677 32875;32876 26280;26281 26281 1162 2 76338 0 STHSELLEDYYQSGR VSRPFLDLSHPRHLKSTHSELLEDYYQSGR STHSELLEDYYQSGRMLLRMSQALGRIVLA K S T G R M 0 1 0 1 0 1 2 1 1 0 2 0 0 0 0 3 1 0 2 0 0 0 15 0 1783.8013 P28288 P28288 348 362 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2;3 8.2877E-24 322.07 By MS/MS 5.33 0.471 2 1 3 9935300 9935300 0 12902 752 13678 32877;32878;32879 26282;26283 26283 2 96228 0 STIFYYVQK LGTTREVELPLTNFRSTIFYYVQKLLQLSC PLTNFRSTIFYYVQKLLQLSCNGNVKSDKL R S T Q K L 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 0 2 1 0 0 9 0 1147.5914 Q9ULT8 Q9ULT8 1841 1849 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0027047 113.26 By MS/MS 2 0.816 1 1 1 3 491970 491970 0 12903 2774 13679 32880;32881;32882 26284 26284 1 117760 0 STIGVEFATR LLSRFTRNEFNLESKSTIGVEFATRSIQVD NLESKSTIGVEFATRSIQVDGKTIKAQIWD K S T T R S 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 10 0 1079.5611 P62491;Q15907 P62491 42 51 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0003892 135.43 By MS/MS 8.5 0.5 1 1 2 2323600 2323600 0 12904 1161 13680 32883;32884 26285 26285 1 38301 0 STIIGESISR SSPNIAKEMHVGHLRSTIIGESISRLFEFA VGHLRSTIIGESISRLFEFAGYDVLRLNHV R S T S R L 0 1 0 0 0 0 1 1 0 3 0 0 0 0 0 3 1 0 0 0 0 0 10 0 1061.5717 P54136 P54136 214 223 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00072654 128.91 By MS/MS By matching 5.75 0.829 2 1 1 3 1 14686000 14605000 81063 12905 1043 13681 32885;32886;32887;32888 26286 26286 1 149370 68076 STLEAETR KARLQRLEDELNRAKSTLEAETRVKQRLEC DELNRAKSTLEAETRVKQRLECEKQQIQND K S T T R V 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 8 0 905.44543 P15924 P15924 1841 1848 DSP Desmoplakin yes yes 2 0.0045287 127.02 By MS/MS 1.5 0.5 1 1 2 1016600 1016600 0 12906 628 13682 32889;32890 26287 26287 1 339970 0 STLFNTLLESDYCTAK YRGDVYLVGATNAGKSTLFNTLLESDYCTA TLFNTLLESDYCTAKGSEAIDRATISPWPG K S T A K G 1 0 1 1 1 0 1 0 0 0 3 1 0 1 0 2 3 0 1 0 0 0 16 0 1861.8768 Q8NC60 Q8NC60 352 367 NOA1 Nitric oxide-associated protein 1 yes yes 2 6.0822E-45 337.25 By MS/MS 5.5 0.5 1 1 2 664140 664140 0 12907 1949 13683 32891;32892 26288 26288 1 5709.1 0 STLLFGQR VICCSPSSYNESETKSTLLFGQRAKTIKNT YNESETKSTLLFGQRAKTIKNTVCVNVELT K S T Q R A 0 1 0 0 0 1 0 1 0 0 2 0 0 1 0 1 1 0 0 0 0 0 8 0 920.50797 P33176 P33176 314 321 KIF5B Kinesin-1 heavy chain yes yes 2 0.0039801 130.77 By MS/MS 4 0 1 1 2764600 2764600 0 12908 800 13684 32893 26289 26289 1 260160 0 STLLFSQGK DANAAQQELKLLLHRSTLLFSQGKMYGYVD KLLLHRSTLLFSQGKMYGYVDTLLTMLAML R S T G K M 0 0 0 0 0 1 0 1 0 0 2 1 0 1 0 2 1 0 0 0 0 0 9 0 979.53385 Q9Y5Q9 Q9Y5Q9 540 548 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 0.01719 104.01 By MS/MS 4 0 1 1 1234500 1234500 0 12909 2920 13685 32894 26290 26290 1 116170 0 STLNEIYFGK ANIGRLVEDMENKIRSTLNEIYFGKTKDIV ENKIRSTLNEIYFGKTKDIVNGLRSIDAIP R S T G K T 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1170.5921 P47756 P47756 226 235 CAPZB F-actin-capping protein subunit beta yes yes 2 1.0705E-08 202.2 By MS/MS 8.5 0.5 1 1 2 6161800 6161800 0 12910 926 13686 32895;32896 26291;26292;26293 26291 3 81436 0 STLQTLPEIVAK AMYLPDTLSPADQLKSTLQTLPEIVAKEAQ QLKSTLQTLPEIVAKEAQVKVAEVEGEQVD K S T A K E 1 0 0 0 0 1 1 0 0 1 2 1 0 0 1 1 2 0 0 1 0 0 12 0 1298.7446 O95202 O95202 435 446 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.0014251 117.25 By MS/MS 4.5 0.5 1 1 2 3418300 3418300 0 12911 394 13687 32897;32898 26294;26295 26295 2 77987 0 STLSNQLLGR RVLRVVLLGAPNAGKSTLSNQLLGRKVFPV PNAGKSTLSNQLLGRKVFPVSRKVHTTRCQ K S T G R K 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 10 0 1087.5986 O75616 O75616 127 136 ERAL1 GTPase Era, mitochondrial yes yes 2 7.7856E-11 218.48 By MS/MS 7 0 1 1 5187800 5187800 0 12912 339 13688 32899 26296 26296 1 81440 0 STLTDSLVCK NIRNMSVIAHVDHGKSTLTDSLVCKAGIIA VDHGKSTLTDSLVCKAGIIASARAGETRFT K S T C K A 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 10 0 1122.5591 P13639 P13639 33 42 EEF2 Elongation factor 2 yes yes 2 2.2791E-05 166.09 By MS/MS 7 2 1 1 1 1 1 1 1 7 39185000 39185000 0 12913 602 13689 32900;32901;32902;32903;32904;32905;32906 26297;26298;26299 26297 3 3006400 0 STLYVSPHPDAFPSLR ______________________________ TLYVSPHPDAFPSLRALIAARYGEAGEGPG M S T L R A 1 1 0 1 0 0 0 0 1 0 2 0 0 1 3 3 1 0 1 1 0 0 16 0 1785.905 P26640 P26640 2 17 VARS Valine--tRNA ligase yes yes 2 0.0003737 134.49 By MS/MS 3.5 0.5 1 1 2 440900 440900 0 12914 735 13690 32907;32908 26300 26300 1 32767 0 STMQELNSR GAGGGDGGILTANEKSTMQELNSRLASYLD LTANEKSTMQELNSRLASYLDKVQALEEAN K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 9 0 1064.4921 P35527;CON__P35527 P35527 155 163 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.9233E-22 254.82 By MS/MS By MS/MS 5.41 3.18 4 3 3 2 2 2 1 3 4 3 13 14 108730000 65659000 43071000 + 12915 822 13691;13692 32909;32910;32911;32912;32913;32914;32915;32916;32917;32918;32919;32920;32921;32922;32923;32924;32925;32926;32927;32928;32929;32930;32931;32932;32933;32934;32935 26301;26302;26303;26304;26305;26306;26307;26308;26309;26310;26311;26312;26313;26314;26315;26316;26317;26318;26319;26320;26321;26322;26323;26324;26325;26326 26319 407 26 7803800 43163000 STNENANTPAAR ______________________________ ______________________________ M S T A R L 3 1 3 0 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 12 0 1244.5745 P52292 P52292 2 13 KPNA2 Importin subunit alpha-1 yes yes 2 2.7151E-06 195.83 By MS/MS By MS/MS 7.5 1.66 2 1 1 3 1 4340000 4189500 150460 12916 1013 13693 32936;32937;32938;32939 26327;26328;26329;26330 26329 4 39922 154180 STNGDTFLGGEDFDQALLR DISILEIQKGVFEVKSTNGDTFLGGEDFDQ DTFLGGEDFDQALLRHIVKEFKRETGVDLT K S T L R H 1 1 1 3 0 1 1 3 0 0 3 0 0 2 0 1 2 0 0 0 0 0 19 0 2054.9545 P38646 P38646 266 284 HSPA9 Stress-70 protein, mitochondrial yes yes 2 7.6011E-35 314.06 By MS/MS 6.5 1.12 1 1 1 1 4 10755000 10755000 0 12917 850 13694 32940;32941;32942;32943 26331;26332 26332 2 99568 0 STNLNCSVIADVR STRTFLQTVSSEKVRSTNLNCSVIADVRHD VRSTNLNCSVIADVRHDGSEPCVDVLFGDG R S T V R H 1 1 2 1 1 0 0 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 13 0 1447.7089 Q96EL3 Q96EL3 44 56 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 7.037E-17 251.75 By MS/MS 10 0 1 1 2333700 2333700 0 12918 2146 13695 32944 26333 26333 1 125780 0 STPKEDDSSASTSQSTR DRGPPQRPKLNLKPRSTPKEDDSSASTSQS PKEDDSSASTSQSTRAASIFGGAKPVDTAA R S T T R A 1 1 0 2 0 1 1 0 0 0 0 1 0 0 1 6 3 0 0 0 0 0 17 1 1782.7868 P23588 P23588 340 356 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 7.3869E-16 249.58 By MS/MS By MS/MS 5.75 0.829 4 2 2 5 3 6588000 6354800 233150 12919 708 13696 32945;32946;32947;32948;32949;32950;32951;32952 26334;26335;26336;26337;26338 26337 5 74380 198810 STPVTVVLPDTK TDILFTEQERGVGIKSTPVTVVLPDTKGKS GIKSTPVTVVLPDTKGKSYLFNIMDTPGHV K S T T K G 0 0 0 1 0 0 0 0 0 0 1 1 0 0 2 1 3 0 0 3 0 0 12 0 1255.7024 Q15029 Q15029 183 194 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 5.5547E-06 185.96 By MS/MS 3.5 0.5 1 1 2 3356700 3356700 0 12920 1476 13697 32953;32954 26339;26340 26339 2 208030 0 STQAATQVVLNVPETR GAAGRSLYFGENRLRSTQAATQVVLNVPET TQAATQVVLNVPETRVTCLESGLRVASEDS R S T T R V 2 1 1 0 0 2 1 0 0 0 1 0 0 0 1 1 3 0 0 3 0 0 16 0 1712.9057 O75439 O75439 44 59 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 1.9341E-05 200.16 By MS/MS 7 0 1 1 1299200 1299200 0 12921 329 13698 32955 26341 26341 1 20396 0 STQGVTLTDLQEAEK SQRKARSRQARQSRRSTQGVTLTDLQEAEK STQGVTLTDLQEAEKTIGRSRSTRTREQEN R S T E K T 1 0 0 1 0 2 2 1 0 0 2 1 0 0 0 1 3 0 0 1 0 0 15 0 1618.805 O14974 O14974 695 709 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 2 1.7992E-16 298.91 By MS/MS 3 0 1 1 380620 380620 0 12922 151 13699 32956 26342 26342 1 6964.3 0 STSFGVPNANSIK GAAGSPGGPRAAVQRSTSFGVPNANSIKQM QRSTSFGVPNANSIKQMLLDWCRAKTRGYE R S T I K Q 1 0 2 0 0 0 0 1 0 1 0 1 0 1 1 3 1 0 0 1 0 0 13 0 1320.6674 P53814 P53814 790 802 SMTN Smoothelin yes yes 2 0.042504 72.243 By MS/MS 9.5 0.5 1 1 2 2924200 2924200 0 12923 1037 13700 32957;32958 26343 26343 1 68911 0 STSGFCQGGGVGGFGGGR NLGGSRSISINLMGRSTSGFCQGGGVGGFG GFCQGGGVGGFGGGRGFGVGSTGAGGFGGG R S T G R G 0 1 0 0 1 1 0 9 0 0 0 0 0 2 0 2 1 0 0 1 0 0 18 0 1643.7111 CON__Q7Z794;Q7Z794 CON__Q7Z794 78 95 KRT77 Keratin, type II cytoskeletal 1b yes no 2 2.2653E-13 184.34 By MS/MS 4.88 2.85 1 1 1 1 1 1 1 1 8 893650 0 893650 + 12924 72 13701 32959;32960;32961;32962;32963;32964;32965;32966 26344;26345;26346;26347;26348;26349;26350;26351;26352 26348 8 0 977210 STSGGTAALGCLVK STKGPSVFPLAPSSKSTSGGTAALGCLVKD KSTSGGTAALGCLVKDYFPEPVTVSWNSGA K S T V K D 2 0 0 0 1 0 0 3 0 0 2 1 0 0 0 2 2 0 0 1 0 0 14 0 1320.6708 P0DOX5;P01857;P01860 P0DOX5 136 149 IGHG1;IGHG3 Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 2 0.012572 105.13 By MS/MS 4.33 2.36 1 2 3 75338 0 75338 12925 453 13702 32967;32968;32969 26353;26354;26355;26356 26353 4 0 75338 STSGPRPGCQPSSPCVPK RPINNMTATYNQLSRSTSGPRPGCQPSSPC GPRPGCQPSSPCVPKLSNSDSQDIQGRNRD R S T P K L 0 1 0 0 2 1 0 2 0 0 0 1 0 0 5 4 1 0 0 1 0 0 18 1 1897.8775 O14545 O14545 468 485 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.027004 66.022 By MS/MS 5 0 1 1 589480 589480 0 12926 125 13703 32970 26357 26357 1 5912.2 0 STSLDVEPIYTFR TLKMWNLQKTAPAKKSTSLDVEPIYTFRAH KKSTSLDVEPIYTFRAHKGPVLCVVMSSNG K S T F R A 0 1 0 1 0 0 1 0 0 1 1 0 0 1 1 2 2 0 1 1 0 0 13 0 1526.7617 O43815 O43815 501 513 STRN Striatin yes yes 2 1.0722E-05 195.83 By MS/MS 4.5 0.5 1 1 2 3087600 3087600 0 12927 237 13704 32971;32972 26358;26359 26358 2 245360 0 STSSFSCLSR GFSSGSAVVSGGSRRSTSSFSCLSRHGGGG GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS R S T S R H 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 0 10 0 1130.5026 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 36 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.77E-05 162.88 By MS/MS By MS/MS 5.44 2.71 2 1 2 2 2 2 2 2 2 1 9 9 215660000 97571000 118090000 + 12928 55 13705 32973;32974;32975;32976;32977;32978;32979;32980;32981;32982;32983;32984;32985;32986;32987;32988;32989;32990 26360;26361;26362;26363;26364;26365;26366;26367;26368;26369;26370;26371;26372;26373;26374;26375;26376;26377 26370 18 9181500 135990000 STSTPTSPGPR AKEFNPTKPLLSVNKSTSTPTSPGPRTHST SVNKSTSTPTSPGPRTHSTPSIPVLTAGQS K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 Q8WWM7 Q8WWM7 678 688 ATXN2L Ataxin-2-like protein yes yes 2 0.02382 83.647 By MS/MS 3.5 0.5 1 1 2 2201200 2201200 0 12929 2036 13706 32991;32992 26378 26378 1 81739 0 STSVNLNQASGAVGSAK SESTEAAAISGLQKRSTSVNLNQASGAVGS SVNLNQASGAVGSAKSLPEINKDRMHLILG R S T A K S 3 0 2 0 0 1 0 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 17 0 1589.8009 Q9P2D3 Q9P2D3 1562 1578 HEATR5B HEAT repeat-containing protein 5B yes yes 2 3.971E-24 319.64 By MS/MS 2 0 1 1 633780 633780 0 12930 2681 13707 32993 26379 26379 1 214370 0 STTGAPSTTADSK GGTVSGPSSACKPGRSTTGAPSTTADSKLS GRSTTGAPSTTADSKLSNQVSTIVSLLSTL R S T S K L 2 0 0 1 0 0 0 1 0 0 0 1 0 0 1 3 4 0 0 0 0 0 13 0 1222.5677 Q9ULT8 Q9ULT8 259 271 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00085853 117.52 By MS/MS 3 1.41 1 1 1 1 1 5 743720 743720 0 12931 2774 13708 32994;32995;32996;32997;32998 26380;26381 26381 2 150080 0 STTNKLETR VQQAAAGALRNLVFRSTTNKLETRRQNGIR RNLVFRSTTNKLETRRQNGIREAVSLLRRT R S T T R R 0 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 3 0 0 0 0 0 9 1 1048.5513 Q13835 Q13835 318 326 PKP1 Plakophilin-1 yes yes 2 0.0039988 143.37 By matching By MS/MS 5 2.79 1 1 1 2 1 1 1 1 1 8 1007200 182740 824450 12932 1410 13709 32999;33000;33001;33002;33003;33004;33005;33006;33007 26382;26383;26384 26382 3 17197 520040 STTPEELYQR RPRTITKNYRLVSLRSTTPEELYQRKIESE LVSLRSTTPEELYQRKIESEEYEEALSLAH R S T Q R K 0 1 0 0 0 1 2 0 0 0 1 0 0 0 1 1 2 0 1 0 0 0 10 0 1222.583 A2RRP1 A2RRP1 523 532 NBAS Neuroblastoma-amplified sequence yes yes 2 0.030077 81.95 By MS/MS 2 0.816 1 1 1 3 668480 668480 0 12933 11 13710 33008;33009;33010 26385 26385 1 162150 0 STTQVADSGYQR IIERLEQELKQIVKRSTTQVADSGYQRGEN VKRSTTQVADSGYQRGENVTVENQPRLLLE R S T Q R G 1 1 0 1 0 2 0 1 0 0 0 0 0 0 0 2 2 0 1 1 0 0 12 0 1311.6055 Q96A65 Q96A65 314 325 EXOC4 Exocyst complex component 4 yes yes 2 2.8436E-06 194.48 By MS/MS 4.5 0.5 1 1 2 2514300 2514300 0 12934 2104 13711 33011;33012 26386 26386 1 216050 0 STTTGHLIYK THINIVVIGHVDSGKSTTTGHLIYKCGGID VDSGKSTTTGHLIYKCGGIDKRTIEKFEKE K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 0 10 0 1119.5924 Q5VTE0;P68104;Q05639 Q5VTE0 21 30 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.015123 94.309 By MS/MS 6.5 0.5 1 1 2 33700000 33700000 0 12935 1209 13712 33013;33014 26387;26388 26388 2 446690 0 STTTSDPPNICK LSGAGTYTTSSLSTKSTTTSDPPNICKVKP STKSTTTSDPPNICKVKPQQLQTSSLPSAS K S T C K V 0 0 1 1 1 0 0 0 0 1 0 1 0 0 2 2 3 0 0 0 0 0 12 0 1319.6027 Q9Y520 Q9Y520 2330 2341 PRRC2C Protein PRRC2C yes yes 2 8.8641E-05 157.75 By MS/MS 1.5 0.5 1 1 2 514350 514350 0 12936 2905 13713 33015;33016 26389;26390;26391 26390 3 141110 0 STVAQLVK KKKLYCIYVAIGQKRSTVAQLVKRLTDADA VAIGQKRSTVAQLVKRLTDADAMKYTIVVS R S T V K R 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 8 0 844.50182 P25705 P25705 254 261 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0007823 155 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 60770000 60213000 556950 12937 723 13714 33017;33018;33019;33020;33021 26392;26393;26394;26395 26393 4 460070 570710 STVAQLVKR KKKLYCIYVAIGQKRSTVAQLVKRLTDADA AIGQKRSTVAQLVKRLTDADAMKYTIVVSA R S T K R L 1 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 9 1 1000.6029 P25705 P25705 254 262 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0032061 134.81 By MS/MS By matching 6 0 2 1 1 6671300 6609300 61982 12938 723 13715 33022;33023 26396 26396 1 45434 63514 STVDAPTAAGR ACLIVSVDETIKNPRSTVDAPTAAGRGRGR KNPRSTVDAPTAAGRGRGRGRPH_______ R S T G R G 3 1 0 1 0 0 0 1 0 0 0 0 0 0 1 1 2 0 0 1 0 0 11 0 1044.52 Q99832 Q99832 525 535 CCT7 T-complex protein 1 subunit eta yes yes 2 1.3012E-08 160.82 By MS/MS By matching 5.33 0.471 2 1 2 1 13708000 13650000 57533 12939 2270 13716 33024;33025;33026 26397 26397 0 113540 48315 STVEGIQASVK GATAEKAAAVGTANKSTVEGIQASVKTARE TANKSTVEGIQASVKTARELTPQVVSAARI K S T V K T 1 0 0 0 0 1 1 1 0 1 0 1 0 0 0 2 1 0 0 2 0 0 11 0 1117.5979 P18206 P18206 656 666 VCL Vinculin yes yes 2 9.9613E-07 190.86 By MS/MS 3 0 1 1 1070700 1070700 0 12940 653 13717 33027 26398 26398 1 19590 0 STVHEILCK ______________________________ ______________________________ M S T C K L 0 0 0 0 1 0 1 0 1 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 1085.5539 P07355;A6NMY6 P07355 2 10 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 0.0046619 106.6 By MS/MS 7 0 1 1 0 0 0 12941 508 13718 33028 26399 26399 1 0 0 STVLQQQYNR DEESTMLEDSVSPKKSTVLQQQYNRVGKVE VSPKKSTVLQQQYNRVGKVEHGSVALPAIM K S T N R V 0 1 1 0 0 3 0 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 10 0 1235.6258 Q9Y490 Q9Y490 429 438 TLN1 Talin-1 yes yes 2 2.8004E-20 252.72 By MS/MS 2.5 0.5 1 1 2 907870 907870 0 12942 2888 13719 33029;33030 26400 26400 1 225520 0 STVNCSTTPVAER LPKRWGKNSEFEGGKSTVNCSTTPVAERFF GKSTVNCSTTPVAERFFTSSTSLTLKHAAW K S T E R F 1 1 1 0 1 0 1 0 0 0 0 0 0 0 1 2 3 0 0 2 0 0 13 0 1420.6616 Q99567 Q99567 151 163 NUP88 Nuclear pore complex protein Nup88 yes yes 2 0.0025792 110.8 By MS/MS 5 0 1 1 531290 531290 0 12943 2250 13720 33031 26401 26401 1 5328.6 0 STVPHAYATADCDLGAVLK SNIRRVIAKRLTESKSTVPHAYATADCDLG HAYATADCDLGAVLKVRQDLVKDDIKVSVN K S T L K V 4 0 0 2 1 0 0 1 1 0 2 1 0 0 1 1 2 0 1 2 0 0 19 0 1987.9673 O00330 O00330 296 314 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 3 0.010706 81.594 By MS/MS 6 0 1 1 2225900 2225900 0 12944 101 13721 33032 26402 26402 1 15301 0 STVRDIDPQNDLTFLR TQYASLMHSFILKARSTVRDIDPQNDLTFL TVRDIDPQNDLTFLRIRSKKNEIMVAPDKD R S T L R I 0 2 1 3 0 1 0 0 0 1 2 0 0 1 1 1 2 0 0 1 0 0 16 1 1888.9643 Q9NP97;Q8TF09 Q9NP97 55 70 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 3 0.017666 77.222 By MS/MS 10 0 1 1 108610 108610 0 12945 2007 13722 33033 26403 26403 1 5853.6 0 SVAGGFVYTYK YVLVGVAKDLILNPRSVAGGFVYTYKLVNN LNPRSVAGGFVYTYKLVNNGEKLEFLHKTP R S V Y K L 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 1 1 0 2 2 0 0 11 0 1190.5972 Q15393 Q15393 919 929 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.029447 80.706 By MS/MS 2 0.816 1 1 1 3 610220 610220 0 12946 1508 13723 33034;33035;33036 26404 26404 1 119440 0 SVAGLKK ______________________________ ______________________________ M S V K K Q 1 0 0 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 7 1 701.44357 Q99962;Q99961;Q99963 Q99962 2 8 SH3GL2;SH3GL1;SH3GL3 Endophilin-A1;Endophilin-A2;Endophilin-A3 yes no 2 0.041734 78.616 By MS/MS 6.5 0.5 1 1 2 1376900 1376900 0 12947 2275 13724 33037;33038 26405 26405 0 17919 0 SVAWAPSGNLLATCSR FECVTTLEGHENEVKSVAWAPSGNLLATCS VAWAPSGNLLATCSRDKSVWVWEVDEEDEY K S V S R D 3 1 1 0 1 0 0 1 0 0 2 0 0 0 1 3 1 1 0 1 0 0 16 0 1688.8304 O76071 O76071 110 125 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 2 0.00033434 140.33 By MS/MS 7 0 1 1 639860 639860 0 12948 361 13725 33039 26406 26406 1 10045 0 SVCTEAGMFAIR LLARLCPNSTGAEIRSVCTEAGMFAIRARR EIRSVCTEAGMFAIRARRKIATEKDFLEAV R S V I R A 2 1 0 0 1 0 1 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 12 0 1340.6217 P35998 P35998 387 398 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.2509E-05 200.6 By MS/MS 6.5 0.5 2 2 4 3295100 3295100 0 12949 831 13726;13727 33040;33041;33042;33043 26407;26408;26409 26408 420 3 33900 0 SVDDVLSHFAQR AIEATGAVIHFGNGKSVDDVLSHFAQRLFD NGKSVDDVLSHFAQRLFDDVPQVRRAVASV K S V Q R L 1 1 0 2 0 1 0 0 1 0 1 0 0 1 0 2 0 0 0 2 0 0 12 0 1372.6735 Q86Y56 Q86Y56 242 253 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.00040744 136.96 By MS/MS 4 0 1 1 1009500 1009500 0 12950 1850 13728 33044 26410 26410 1 95003 0 SVDEALR GVLRQITVNDLPVGRSVDEALRLVQAFQYT VNDLPVGRSVDEALRLVQAFQYTDEHGEVC R S V L R L 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 0 788.40283 P32119 P32119 151 157 PRDX2 Peroxiredoxin-2 yes yes 2 0.044235 94.006 By MS/MS By matching 9 0 2 1 1 1770300 1729100 41179 12951 796 13729 33045;33046 26411 26411 1 34029 93901 SVDETLR GILRQITVNDLPVGRSVDETLRLVQAFQFT VNDLPVGRSVDETLRLVQAFQFTDKHGEVC R S V L R L 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 7 0 818.4134 Q06830;Q13162 Q06830 152 158 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 2 0.021648 111.01 By MS/MS 9 0 1 1 5517300 5517300 0 12952 1297;1361 13730 33047 26412 26412 1 108580 0 SVDFLLDSSLR LGLLTIPIIIHPIDRSVDFLLDSSLRKLYP PIDRSVDFLLDSSLRKLYPTVGKPSSS___ R S V L R K 0 1 0 2 0 0 0 0 0 0 3 0 0 1 0 3 0 0 0 1 0 0 11 0 1250.6507 Q9UDX5 Q9UDX5 144 154 MTFP1 Mitochondrial fission process protein 1 yes yes 2 5.5927E-13 254.83 By MS/MS 9.33 0.471 2 1 3 789620 789620 0 12953 2711 13731 33048;33049;33050 26413;26414;26415 26413 3 17895 0 SVDFLLDSSLRK LGLLTIPIIIHPIDRSVDFLLDSSLRKLYP IDRSVDFLLDSSLRKLYPTVGKPSSS____ R S V R K L 0 1 0 2 0 0 0 0 0 0 3 1 0 1 0 3 0 0 0 1 0 0 12 1 1378.7456 Q9UDX5 Q9UDX5 144 155 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.00082866 147.73 By MS/MS 9 0 1 1 234060 234060 0 12954 2711 13732 33051 26416 26416 1 4606.4 0 SVDGSPTTAFTVLECEGSR FVRLSSTGQRVCSVRSVDGSPTTAFTVLEC SPTTAFTVLECEGSRRLGSRPRRYLLTGQA R S V S R R 1 1 0 1 1 0 2 2 0 0 1 0 0 1 1 3 3 0 0 2 0 0 19 0 2011.9157 Q8TBC3 Q8TBC3 536 554 SHKBP1 SH3KBP1-binding protein 1 yes yes 2 0.0022799 99.161 By MS/MS 5 0 1 1 444190 444190 0 12955 1983 13733 33052 26417 26417 1 4455 0 SVDNRPQAPLVSASAVNEEVSK ISQKSVDIHDSIQPRSVDNRPQAPLVSASA APLVSASAVNEEVSKIKSTAKFPEQKLFAA R S V S K I 3 1 2 1 0 1 2 0 0 0 1 1 0 0 2 4 0 0 0 4 0 0 22 1 2296.1659 Q9Y6D6 Q9Y6D6 1580 1601 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 3 1.6397E-06 180.41 By MS/MS 2 0 1 1 799500 799500 0 12956 2941 13734 33053 26418 26418 1 270420 0 SVEDRFDQQKNDYDQLQK TRLTYEIEDEKRRRKSVEDRFDQQKNDYDQ DRFDQQKNDYDQLQKARQCEKENLGWQKLE K S V Q K A 0 1 1 4 0 4 1 0 0 0 1 2 0 1 0 1 0 0 1 1 0 0 18 2 2255.0455 P15924 P15924 1127 1144 DSP Desmoplakin yes yes 3 0.0014628 118.5 By matching By MS/MS 3.5 0.5 1 1 1 1 1675800 703440 972400 12957 628 13735 33054;33055 26419 26419 1 66199 123770 SVEDVRPHHTDANNQSACFEAPDQK IRESSEAQVQKFLSRSVEDVRPHHTDANNQ DANNQSACFEAPDQKTLSAPQEERISAVES R S V Q K T 3 1 2 3 1 2 2 0 2 0 0 1 0 1 2 2 1 0 0 2 0 0 25 1 2851.258 Q9Y520 Q9Y520 878 902 PRRC2C Protein PRRC2C yes yes 4 0.02454 47.564 By MS/MS 1.5 0.5 1 1 2 546870 546870 0 12958 2905 13736 33056;33057 26420 26420 1 167930 0 SVEEDYVTNIR FKNEYKGMLLQKVEKSVEEDYVTNIRNNCW KVEKSVEEDYVTNIRNNCWKERQQKTDMQY K S V I R N 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 1 1 0 1 2 0 0 11 0 1323.6307 Q8TBM8 Q8TBM8 319 329 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 2.3366E-05 167.93 By MS/MS 7 0 1 1 1501500 1501500 0 12959 1984 13737 33058 26421;26422 26421 2 23572 0 SVEEISTLVQK EYLNGAVREESIHCKSVEEISTLVQKLADQ IHCKSVEEISTLVQKLADQSGLDVIRIRKP K S V Q K L 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 2 1 0 0 2 0 0 11 0 1231.666 Q8N983 Q8N983 93 103 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 4.2861E-11 225.66 By MS/MS 9.5 0.5 1 1 2 10270000 10270000 0 12960 1933 13738 33059;33060 26423 26423 1 389920 0 SVEEPTQPGGTGLSDSR NPRMKRASSLNFLNKSVEEPTQPGGTGLSD EEPTQPGGTGLSDSRTLSSSSMDLSRRSSL K S V S R T 0 1 0 1 0 1 2 3 0 0 1 0 0 0 2 3 2 0 0 1 0 0 17 0 1715.7962 Q9H0B6 Q9H0B6 589 605 KLC2 Kinesin light chain 2 yes yes 2 1.6018E-33 318.07 By MS/MS 5 0 1 1 2617000 2617000 0 12961 2405 13739 33061 26424 26424 1 26247 0 SVEEVASEIQPFLR LIDKTTLDKLLKGKKSVEEVASEIQPFLRG KSVEEVASEIQPFLRGAGSIAGASASPKEK K S V L R G 1 1 0 0 0 1 3 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 14 0 1602.8253 P15924 P15924 2000 2013 DSP Desmoplakin yes yes 2 0.00042829 152.54 By MS/MS 2 0 1 1 95554 95554 0 12962 628 13740 33062 26425;26426 26425 2 32320 0 SVEITTDNILEGR QVPYHLVLQDLQLTRSVEITTDNILEGRIQ TRSVEITTDNILEGRIQVPFPTQRSDSIRP R S V G R I 0 1 1 1 0 0 2 1 0 2 1 0 0 0 0 1 2 0 0 1 0 0 13 0 1445.7362 Q9UKV5 Q9UKV5 485 497 AMFR E3 ubiquitin-protein ligase AMFR yes yes 2 6.8947E-05 208.74 By MS/MS 1 0 1 1 248440 248440 0 12963 2765 13741 33063 26427 26427 1 59867 0 SVETLKEMIK ARNTGIICTIGPASRSVETLKEMIKSGMNV GPASRSVETLKEMIKSGMNVARLNFSHGTH R S V I K S 0 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 1 0 0 1 0 0 10 1 1176.6424 P14618 P14618 57 66 PKM Pyruvate kinase PKM yes yes 2 0.0064979 117.53 By MS/MS 6 0 1 1 2527900 2527900 0 12964 614 13742 33064 26428 26428 1 17378 0 SVEVEGYGSK GPKKKKVTLHIKWPKSVEVEGYGSKKIDAE IKWPKSVEVEGYGSKKIDAERQAAAAACQL K S V S K K 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 1 2 0 0 10 0 1053.4979 Q7L2E3 Q7L2E3 96 105 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0018344 112.71 By MS/MS 3.5 0.5 1 1 2 1683400 1683400 0 12965 1761 13743 33065;33066 26429;26430 26429 2 47028 0 SVFALTNGIYPHK LPKIKAIPQLQGYLRSVFALTNGIYPHKLV LRSVFALTNGIYPHKLVF____________ R S V H K L 1 0 1 0 0 0 0 1 1 1 1 1 0 1 1 1 1 0 1 1 0 0 13 0 1445.7667 Q02878 Q02878 273 285 RPL6 60S ribosomal protein L6 yes yes 2 0.00057028 147.3 By MS/MS 7 0 1 1 540880 540880 0 12966 1281 13744 33067 26431 26431 1 8490.8 0 SVFLTFLR ASAPEVVDMQKRLHRSVFLTFLRMSTHKES MQKRLHRSVFLTFLRMSTHKESKDHFISPS R S V L R M 0 1 0 0 0 0 0 0 0 0 2 0 0 2 0 1 1 0 0 1 0 0 8 0 981.56475 Q9H1I8 Q9H1I8 122 129 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.0051105 121.99 By MS/MS 4 0 1 1 66285 66285 0 12967 2422 13745 33068 26432;26433 26432 2 6237.9 0 SVFMSSTTSASGTGR YLIKPLNKTYLEVVRSVFMSSTTSASGTGR SVFMSSTTSASGTGRKRTIKDLQEEVSNLY R S V G R K 1 1 0 0 0 0 0 2 0 0 0 0 1 1 0 5 3 0 0 1 0 0 15 0 1474.6722 O94874 O94874 519 533 UFL1 E3 UFM1-protein ligase 1 yes yes 2 2.9836E-05 197.07 By MS/MS 4.33 0.471 2 1 3 2289700 2289700 0 12968 372 13746;13747 33069;33070;33071 26434;26435 26435 147 2 199420 0 SVFPEQANNNEWAR LHYSLYDQAEKLVSKSVFPEQANNNEWARY KSVFPEQANNNEWARYLYYTGRIKAIQLEY K S V A R Y 2 1 3 0 0 1 2 0 0 0 0 0 0 1 1 1 0 1 0 1 0 0 14 0 1660.7594 O43242 O43242 274 287 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00046567 151.16 By MS/MS 6 0 1 1 6539900 6539900 0 12969 198 13748 33072 26436 26436 1 44957 0 SVGDGETVEFDVVEGEK HQTAIKKNNPRKYLRSVGDGETVEFDVVEG GDGETVEFDVVEGEKGAEAANVTGPGGVPV R S V E K G 0 0 0 2 0 0 4 3 0 0 0 1 0 1 0 1 1 0 0 4 0 0 17 0 1794.816 P67809;P16989;Q9Y2T7 P67809 102 118 YBX1;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3;Y-box-binding protein 2 yes no 2 8.0452E-25 289.86 By MS/MS 6.5 0.5 1 1 2 5235100 5235100 0 12970 1206 13749 33073;33074 26437 26437 1 37712 0 SVGDNSSDLSNVAVIDGNR GWHYLAYDWHWTTDRSVGDNSSDLSNVAVI NSSDLSNVAVIDGNRVLVTVFRQTVVPPPM R S V N R V 1 1 3 3 0 0 0 2 0 1 1 0 0 0 0 4 0 0 0 3 0 0 19 0 1917.9028 O95163 O95163 380 398 IKBKAP Elongator complex protein 1 yes yes 2 1.4088E-11 236.05 By MS/MS 3 0 1 1 385740 385740 0 12971 388 13750 33075 26438 26438 1 7057.9 0 SVGDVALSQIVR MLVTTPEKWDVVTRKSVGDVALSQIVRLLI TRKSVGDVALSQIVRLLILDEVHLLHEDRG K S V V R L 1 1 0 1 0 1 0 1 0 1 1 0 0 0 0 2 0 0 0 3 0 0 12 0 1242.6932 Q8N3C0 Q8N3C0 595 606 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 5.0916E-06 187.42 By MS/MS 1.5 0.5 1 1 2 468650 468650 0 12972 1911 13751 33076;33077 26439;26440 26439 2 132120 0 SVGELPSTVESLQK ETQLVLYGDVEELKRSVGELPSTVESLQKV RSVGELPSTVESLQKVQEQVHTLLSQDQAQ R S V Q K V 0 0 0 0 0 1 2 1 0 0 2 1 0 0 1 3 1 0 0 2 0 0 14 0 1472.7722 Q07065 Q07065 492 505 CKAP4 Cytoskeleton-associated protein 4 yes yes 2 0.003806 107.34 By MS/MS 5 0 1 1 1582700 1582700 0 12973 1300 13752 33078 26441 26441 1 15874 0 SVGEVMGIGR SKFLRVSTKIGSCMKSVGEVMGIGRSFEEA GSCMKSVGEVMGIGRSFEEAFQKALRMVDE K S V G R S 0 1 0 0 0 0 1 3 0 1 0 0 1 0 0 1 0 0 0 2 0 0 10 0 1003.5121 P27708 P27708 761 770 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 2.1644E-10 205.36 By MS/MS 1.67 0.471 1 2 3 1476800 1476800 0 12974 745 13753;13754 33079;33080;33081 26442;26443 26443 373 2 486720 0 SVGGSFYLQSK EVQKNYEHLFKVNDKSVGGSFYLQSKVVRA VNDKSVGGSFYLQSKVVRAKERLDEELKIQ K S V S K V 0 0 0 0 0 1 0 2 0 0 1 1 0 1 0 3 0 0 1 1 0 0 11 0 1171.5873 Q9Y3D7 Q9Y3D7 87 97 PAM16 Mitochondrial import inner membrane translocase subunit TIM16 yes yes 2 6.3942E-07 195.36 By MS/MS 10 0 1 1 495480 495480 0 12975 2873 13755 33082 26444 26444 1 26705 0 SVHKVEPITK LATEKKQKSILYDERSVHKVEPITKHIGLV LYDERSVHKVEPITKHIGLVYSGMGPDYRV R S V T K H 0 0 0 0 0 0 1 0 1 1 0 2 0 0 1 1 1 0 0 2 0 0 10 1 1136.6554 P25787 P25787 61 70 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.00129 142.98 By MS/MS 8 0 1 1 652820 652820 0 12976 725 13756 33083 26445 26445 1 8241.8 0 SVHYCPATK GIVTKCSLVRPKVVRSVHYCPATKKTIERR RPKVVRSVHYCPATKKTIERRYSDLTTLVA R S V T K K 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 9 0 1061.4964 P25205 P25205 144 152 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.018232 89.698 By MS/MS 4 0 1 1 1056800 1056800 0 12977 719 13757 33084 26446 26446 1 99455 0 SVIDTSTIVR FSDEDEDDDVDGREKSVIDTSTIVRKKALP DGREKSVIDTSTIVRKKALPDSGEDRDTKE K S V V R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 2 2 0 0 2 0 0 10 0 1089.603 O43815 O43815 259 268 STRN Striatin yes yes 2 1.8209E-05 169.09 By MS/MS By matching 4.33 0.471 2 1 2 1 2706200 2637700 68553 12978 237 13758 33085;33086;33087 26447 26447 1 212350 146060 SVIEQGGIQTVDQLIK VSGDTVPQSILTKSRSVIEQGGIQTVDQLI VIEQGGIQTVDQLIKELPELLQRNREILDE R S V I K E 0 0 0 1 0 3 1 2 0 3 1 1 0 0 0 1 1 0 0 2 0 0 16 0 1726.9465 Q8WUM4 Q8WUM4 423 438 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 1.0111E-33 312.92 By MS/MS 4.5 0.5 1 1 2 948350 948350 0 12979 2018 13759 33088;33089 26448 26448 1 79396 0 SVIGHLQTK TRDMGGYSTTTDFIKSVIGHLQTKGS____ TTDFIKSVIGHLQTKGS_____________ K S V T K G 0 0 0 0 0 1 0 1 1 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 981.56073 O43837 O43837 375 383 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 0.0018717 106.68 By MS/MS 7 0 1 1 977520 977520 0 12980 242 13760 33090 26449 26449 1 15345 0 SVILEAFSSPSEEVK EVGHHIDLSGQLELKSVILEAFSSPSEEVK SVILEAFSSPSEEVKSAASYALGSISVGNL K S V V K S 1 0 0 0 0 0 3 0 0 1 1 1 0 1 1 4 0 0 0 2 0 0 15 0 1620.8247 Q86VP6 Q86VP6 859 873 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 1.6027E-11 275.95 By MS/MS 4 0.816 1 1 1 3 2093300 2093300 0 12981 1831 13761 33091;33092;33093 26450;26451;26452 26451 3 119150 0 SVLDKLSANQQNILK KVLDARGSNSLPLLRSVLDKLSANQQNILK SVLDKLSANQQNILKFIACNEIFLMPATVF R S V L K F 1 0 2 1 0 2 0 0 0 1 3 2 0 0 0 2 0 0 0 1 0 0 15 1 1669.9363 P57088 P57088 144 158 TMEM33 Transmembrane protein 33 yes yes 2 5.1282E-23 274.59 By MS/MS 8.5 0.5 1 1 2 3387100 3387100 0 12982 1078 13762 33094;33095 26453 26453 1 58134 0 SVLFVCLGNICR ______________________________ ATKSVLFVCLGNICRSPIAEAVFRKLVTDQ K S V C R S 0 1 1 0 2 0 0 1 0 1 2 0 0 1 0 1 0 0 0 2 0 0 12 0 1436.7268 P24666 P24666 8 19 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 1.1063E-08 214.05 By MS/MS 10 0 1 1 124950 124950 0 12983 715 13763 33096 26454 26454 1 6734.2 0 SVLLQER GVSDSCTGPVNALIRSVLLQERGGNNSFTH GPVNALIRSVLLQERGGNNSFTHEALTLKY R S V E R G 0 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 7 0 843.48142 P08240 P08240 35 41 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.040933 96.492 By MS/MS 5 1.41 1 1 1 1 1 5 4870500 4870500 0 12984 522 13764 33097;33098;33099;33100;33101 26455 26455 1 71504 0 SVLLQGEAGR VDNIQTAFNTRMPPRSVLLQGEAGRVAGDL RMPPRSVLLQGEAGRVAGDLGAGSSPHPSL R S V G R V 1 1 0 0 0 1 1 2 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1028.5615 Q8N201 Q8N201 265 274 INTS1 Integrator complex subunit 1 yes yes 2 0.013766 89.827 By MS/MS 2.5 0.5 1 1 2 712420 712420 0 12985 1907 13765 33102;33103 26456 26456 1 144690 0 SVLNEFDAIQK VSVQIPTGQNKLHLRSVLNEFDAIQKAQKE LHLRSVLNEFDAIQKAQKENSSCTDKREWW R S V Q K A 1 0 1 1 0 1 1 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 11 0 1262.6507 Q14674 Q14674 1752 1762 ESPL1 Separin yes yes 2 7.7711E-07 215.72 By MS/MS 2 0 1 1 240530 240530 0 12986 1449 13766 33104 26457 26457 1 81357 0 SVLSEGHQR RIRIWGTEGDSWICKSVLSEGHQRTVRKVA DSWICKSVLSEGHQRTVRKVAWSPCGNYLA K S V Q R T 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1011.5098 O76071 O76071 54 62 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 2 2.6576E-05 150.05 By MS/MS 7.5 0.5 1 1 2 0 0 0 12987 361 13767 33105;33106 26458;26459 26458 2 0 0 SVLVSAGNVK LSSQSHYDFGLRALKSVLVSAGNVKRERIQ LRALKSVLVSAGNVKRERIQKIKREKEERG K S V V K R 1 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 3 0 0 10 0 972.5604 Q14204 Q14204 2095 2104 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.050182 72.243 By MS/MS 1.5 0.5 1 1 2 2204600 2204600 0 12988 1433 13768 33107;33108 26460 26460 1 595910 0 SVLVSAGNVKR LSSQSHYDFGLRALKSVLVSAGNVKRERIQ RALKSVLVSAGNVKRERIQKIKREKEERGE K S V K R E 1 1 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 1 1128.6615 Q14204 Q14204 2095 2105 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0031431 123.21 By MS/MS 1.5 0.5 1 1 2 999100 999100 0 12989 1433 13769 33109;33110 26461 26461 1 283670 0 SVMDATQIAGLNCLR CVVSVPCFYTDAERRSVMDATQIAGLNCLR SVMDATQIAGLNCLRLMNETTAVALAYGIY R S V L R L 2 1 1 1 1 1 0 1 0 1 2 0 1 0 0 1 1 0 0 1 0 0 15 0 1647.8073 P34932 P34932 155 169 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 0.00043136 144.28 By MS/MS 4 0 1 1 746700 746700 0 12990 810 13770 33111 26462 26462 402 1 70269 0 SVMLYAAEMIPK QEDGSLCLVQFPSRKSVMLYAAEMIPKLKT SRKSVMLYAAEMIPKLKTRTQKTGGADQSL K S V P K L 2 0 0 0 0 0 1 0 0 1 1 1 2 0 1 1 0 0 1 1 0 0 12 0 1351.688 P09132 P09132 103 114 SRP19 Signal recognition particle 19 kDa protein yes yes 2 1.0954E-06 196.27 By MS/MS 9.5 0.5 1 1 2 1021000 1021000 0 12991 533 13771 33112;33113 26463 26463 234;235 1 48446 0 SVNELIYK RIVEPYIAWGYPNLKSVNELIYKRGYGKIN WGYPNLKSVNELIYKRGYGKINKKRIALTD K S V Y K R 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 8 0 964.52295 P18124 P18124 149 156 RPL7 60S ribosomal protein L7 yes yes 2 0.0085009 112.41 By MS/MS By matching 8 0 2 1 1 2643800 2580800 62922 12992 652 13772 33114;33115 26464 26464 1 32583 84910 SVNELIYKR RIVEPYIAWGYPNLKSVNELIYKRGYGKIN GYPNLKSVNELIYKRGYGKINKKRIALTDN K S V K R G 0 1 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 9 1 1120.6241 P18124 P18124 149 157 RPL7 60S ribosomal protein L7 yes yes 3 0.066711 64.42 By MS/MS 8 0 1 1 0 0 0 12993 652 13773 33116 26465 26465 1 0 0 SVNLLVVK DSRIEDLEEGQQVIRSVNLLVVKVLEKSDQ EGQQVIRSVNLLVVKVLEKSDQTNILSALL R S V V K V 0 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 3 0 0 8 0 870.55385 Q14008 Q14008 1667 1674 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0043283 128.61 By MS/MS 2.5 1.12 1 1 1 1 4 2575600 2575600 0 12994 1417 13774 33117;33118;33119;33120 26466 26466 1 692990 0 SVNVNAASGGVQNSGIVR LNKGCSNKPTTVNKRSVNVNAASGGVQNSG VNAASGGVQNSGIVREAPATSIATVLPQPM R S V V R E 2 1 3 0 0 1 0 3 0 1 0 0 0 0 0 3 0 0 0 4 0 0 18 0 1727.8915 Q8NHV4 Q8NHV4 325 342 NEDD1 Protein NEDD1 yes yes 2 2.0365E-44 319.82 By MS/MS 5 0 1 1 1595300 1595300 0 12995 1969 13775 33121 26467 26467 1 16000 0 SVPAFIDISEEDQAAELR ______________________________ AFIDISEEDQAAELRAYLKSKGAEISEENS M S V L R A 3 1 0 2 0 1 3 0 0 2 1 0 0 1 1 2 0 0 0 1 0 0 18 0 1988.9691 Q7L2H7 Q7L2H7 2 19 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.0002193 191.06 By MS/MS 8.2 1.17 2 1 1 1 5 2595600 2595600 0 12996 1762 13776 33122;33123;33124;33125;33126 26468;26469;26470 26469 3 45455 0 SVPDEIILLR LNSILVLDLRDNKLKSVPDEIILLRSLERL DNKLKSVPDEIILLRSLERLDLSNNDISSL K S V L R S 0 1 0 1 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 10 0 1153.6707 Q9H9A6 Q9H9A6 303 312 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.001074 122.19 By MS/MS 6 0.816 1 1 1 3 2372100 2372100 0 12997 2484 13777 33127;33128;33129 26471;26472 26471 2 24157 0 SVPLATAPMAEQR QQYTLEPSEKPFDLKSVPLATAPMAEQRTE LKSVPLATAPMAEQRTESTPITAVKQPEKV K S V Q R T 3 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 13 0 1369.7024 Q9Y678 Q9Y678 578 590 COPG1 Coatomer subunit gamma-1 yes yes 2 2.102E-05 184.24 By MS/MS By matching 4.25 0.433 3 1 3 1 3697000 3676600 20378 12998 2933 13778;13779 33130;33131;33132;33133 26473;26474 26474 1213 2 328280 43418 SVPNQPSTNEILQAVLK AIACVVTACSAELEKSVPNQPSTNEILQAV PNQPSTNEILQAVLKECSKENVKYKIVAIS K S V L K E 1 0 2 0 0 2 1 0 0 1 2 1 0 0 2 2 1 0 0 2 0 0 17 0 1836.9945 Q5VYK3 Q5VYK3 1606 1622 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.025367 77.644 By MS/MS 2 0 1 1 70263 70263 0 12999 1656 13780 33134 26475 26475 1 23766 0 SVPTSTVFYPSDGVATEK DGPSQMALEDLAMFRSVPTSTVFYPSDGVA TSTVFYPSDGVATEKAVELAANTKGICFIR R S V E K A 1 0 0 1 0 0 1 1 0 0 0 1 0 1 2 3 3 0 1 3 0 0 18 0 1883.9153 P29401 P29401 439 456 TKT Transketolase yes yes 2 0.00033513 154.23 By MS/MS By MS/MS 4 1 1 1 1 1 1246300 1075900 170360 13000 758 13781 33135;33136 26476;26477;26478;26479 26479 4 10791 21685 SVQANLDQSQR VKGRPRPSPLVKAHKSVQANLDQSQRGSSP KAHKSVQANLDQSQRGSSPQNTTTPKPSVE K S V Q R G 1 1 1 1 0 3 0 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 11 0 1244.6109 Q27J81 Q27J81 359 369 INF2 Inverted formin-2 yes yes 2 4.7888E-09 205.52 By MS/MS 3 0 1 1 456530 456530 0 13001 1564 13782 33137 26480 26480 1 8353.2 0 SVQATTENKELK ASWNMSMLQTQDLVKSVQATTENKELKTVT LVKSVQATTENKELKTVTFSKL________ K S V L K T 1 0 1 0 0 1 2 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 12 1 1346.7042 Q13011 Q13011 310 321 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 0.00034473 160.91 By MS/MS 8 0 1 1 1808300 1808300 0 13002 1345 13783 33138 26481 26481 1 22830 0 SVQPQSHKPQPTR GDAINWPTPGEIAHKSVQPQSHKPQPTRKL HKSVQPQSHKPQPTRKLPPKKDMKEQEKGE K S V T R K 0 1 0 0 0 3 0 0 1 0 0 1 0 0 3 2 1 0 0 1 0 0 13 1 1488.7797 Q6PKG0 Q6PKG0 186 198 LARP1 La-related protein 1 yes yes 3 0.010611 86.699 By MS/MS 3.5 0.5 1 1 2 1149200 1149200 0 13003 1722 13784 33139;33140 26482 26482 1 35786 0 SVQQTVELLTR MGVTCVSQMPVAEGKSVQQTVELLTRKLEM AEGKSVQQTVELLTRKLEMLGAEKQGTFCV K S V T R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 1 2 0 0 2 0 0 11 0 1272.7038 Q9H944 Q9H944 16 26 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 2 4.1704E-09 208.15 By MS/MS 9 0 1 1 377320 377320 0 13004 2481 13785 33141 26483 26483 1 7425.7 0 SVQTTLQTDEVK GPGFHLMLPFITSYKSVQTTLQTDEVKNVP SYKSVQTTLQTDEVKNVPCGTSGGVMIYFD K S V V K N 0 0 0 1 0 2 1 0 0 0 1 1 0 0 0 1 3 0 0 2 0 0 12 0 1347.6882 O94905;O75477 O94905 61 72 ERLIN2;ERLIN1 Erlin-2;Erlin-1 yes no 2 2.3347E-09 252.97 By MS/MS By matching 7 0 2 1 1 3195800 3157000 38816 13005 375 13786 33142;33143 26484 26484 1 49559 69906 SVRYSSSK ______________________________ ______________________________ M S V S K H 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 1 1 0 0 8 1 912.46649 CON__P13645;P13645 CON__P13645 2 9 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.012433 104.01 By matching By MS/MS 6.44 2.87 1 1 1 1 1 1 1 2 1 8 5418900 76291 5342600 + 13006 50 13787 33144;33145;33146;33147;33148;33149;33150;33151;33152 26485;26486;26487;26488;26489;26490;26491 26485 7 4111.8 8006200 SVRYSSSKHYSSSR ______________________________ MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG M S V S R S 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 7 0 0 2 1 0 0 14 2 1629.7859 CON__P13645;P13645 CON__P13645 2 15 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3;4 6.9444E-15 212.68 By MS/MS By MS/MS 5.31 2.97 1 4 1 1 1 1 2 3 2 5 11 18344000 1443500 16900000 + 13007 50 13788 33153;33154;33155;33156;33157;33158;33159;33160;33161;33162;33163;33164;33165;33166;33167;33168 26492;26493;26494;26495;26496;26497;26498;26499;26500;26501;26502;26503;26504;26505;26506 26496 15 214040 23471000 SVSDNDIR IRRDHFEEAMRFARRSVSDNDIRKYEMFAQ AMRFARRSVSDNDIRKYEMFAQTLQQSRGF R S V I R K 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 8 0 904.42502 P55072 P55072 746 753 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.018484 101.33 By MS/MS 9.5 0.5 1 1 2 816290 816290 0 13008 1054 13789 33169;33170 26507 26507 1 34962 0 SVSHGSNHTQKPDEQR EERISAVESQPSRKRSVSHGSNHTQKPDEQ VSHGSNHTQKPDEQRSEPSAGIPKVTSRCI R S V Q R S 0 1 1 1 0 2 1 1 2 0 0 1 0 0 1 3 1 0 0 1 0 0 16 1 1805.8405 Q9Y520 Q9Y520 924 939 PRRC2C Protein PRRC2C yes yes 3 0.00052409 123.63 By MS/MS 2 0.816 1 1 1 3 358480 358480 0 13009 2905 13790 33171;33172;33173 26508 26508 1 100120 0 SVSSNVASVSPIPAGSK ASPRVPGGSPRTPNRSVSSNVASVSPIPAG SSNVASVSPIPAGSKKIDPNMKAGATSEGV R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 Q9Y6G9 Q9Y6G9 412 428 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 4.7169E-07 213.99 By MS/MS 5.5 0.5 1 1 2 3654300 3654300 0 13010 2943 13791 33174;33175 26509 26509 1 26545 0 SVSTPSEAGSQDSGDGAVGSR FSEYWVPPPMSPSSKSVSTPSEAGSQDSGD EAGSQDSGDGAVGSRTLHWDTDPSVLQLHS K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 Q13409 Q13409 92 112 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 1.2978E-18 252.1 By MS/MS By matching 5 0 2 1 1 1129100 1079500 49590 13011 1379 13792 33176;33177 26510 26510 1 10827 41645 SVTAFFK SKDPAEQQGKGVALKSVTAFFKWLREAEEE QGKGVALKSVTAFFKWLREAEEESDHN___ K S V F K W 1 0 0 0 0 0 0 0 0 0 0 1 0 2 0 1 1 0 0 1 0 0 7 0 798.42759 Q04637 Q04637 1581 1587 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.032587 102.77 By MS/MS 4 2 1 1 1 1 1 1 1 7 14559000 14559000 0 13012 1291 13793 33178;33179;33180;33181;33182;33183;33184 26511 26511 1 3566500 0 SVTCTYSPALNK SYGFRLGFLHSGTAKSVTCTYSPALNKMFC TAKSVTCTYSPALNKMFCQLAKTCPVQLWV K S V N K M 1 0 1 0 1 0 0 0 0 0 1 1 0 0 1 2 2 0 1 1 0 0 12 0 1339.6442 P04637 P04637 121 132 TP53 Cellular tumor antigen p53 yes yes 2 3.8083E-06 191.45 By MS/MS 6.5 0.5 1 1 2 4187300 4187300 0 13013 476 13794 33185;33186 26512 26512 1 31099 0 SVTDSIRDEYAFLQK IGVVNRSQLDINNKKSVTDSIRDEYAFLQK SVTDSIRDEYAFLQKKYPSLANRNGTKYLA K S V Q K K 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 2 1 0 1 1 0 0 15 1 1770.8788 O00429 O00429 257 271 DNM1L Dynamin-1-like protein yes yes 3 0.025179 70.622 By MS/MS 5 0 1 1 561240 561240 0 13014 105 13795 33187 26513 26513 1 5628.9 0 SVTEQGAELSNEER AEQAERYDDMAACMKSVTEQGAELSNEERN KSVTEQGAELSNEERNLLSVAYKNVVGARR K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 P63104 P63104 28 41 YWHAZ 14-3-3 protein zeta/delta yes yes 2 4.8114E-24 283.47 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 8920200 8846400 73806 13015 1195 13796 33188;33189;33190;33191 26514;26515 26515 2 115210 99597 SVTLESKK QCGAAEEEFVQRFRRSVTLESKKQLIEPVQ FVQRFRRSVTLESKKQLIEPVQYDEQGMAF R S V K K Q 0 0 0 0 0 0 1 0 0 0 1 2 0 0 0 2 1 0 0 1 0 0 8 1 890.5073 P82933 P82933 247 254 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.007989 139.97 By MS/MS By matching 7.33 0.471 2 1 2 1 5826700 5792000 34670 13016 1239 13797 33192;33193;33194 26516 26516 1 89810 62439 SVTLLIK GEEKFTFIEKCNNPRSVTLLIKGPNKHTLT IEKCNNPRSVTLLIKGPNKHTLTQIKDAVR R S V I K G 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 7 0 772.50584 P40227 P40227 371 377 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.0080711 143.02 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 19287000 19287000 0 13017 858 13798 33195;33196;33197;33198;33199;33200 26517;26518;26519 26517 3 173890 0 SVTNEDVTQEELGGAK KDTSYLFITGPDVVKSVTNEDVTQEELGGA VTNEDVTQEELGGAKTHTTMSGVAHRAFEN K S V A K T 1 0 1 1 0 1 3 2 0 0 1 1 0 0 0 1 2 0 0 2 0 0 16 0 1675.7901 P05166 P05166 233 248 PCCB Propionyl-CoA carboxylase beta chain, mitochondrial yes yes 2 1.1283E-19 219.89 By MS/MS 6 0 1 1 0 0 0 13018 488 13799 33201 26520 26520 1 0 0 SVVADTDQK EEITESSSTEEMEVRSVVADTDQKALGSEV EEMEVRSVVADTDQKALGSEVQDASKVTTQ R S V Q K A 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 9 0 961.47164 Q9H2G2 Q9H2G2 655 663 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.020263 88.819 By MS/MS 2 0 1 1 429820 429820 0 13019 2429 13800 33202 26521 26521 1 145380 0 SVVALHNLINNK TNDQMVVVYLASLIRSVVALHNLINNKIAN LIRSVVALHNLINNKIANRDAEKKEGQEKE R S V N K I 1 0 3 0 0 0 0 0 1 1 2 1 0 0 0 1 0 0 0 2 0 0 12 0 1320.7514 P51665 P51665 268 279 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 1.9005E-08 205.59 By MS/MS 7 0 1 1 2748600 2748600 0 13020 1005 13801 33203 26522 26522 1 43148 0 SVVANDASTR GLRSIRFALEVPGLRSVVANDASTRAVDLI VPGLRSVVANDASTRAVDLIRRNVQLNDVA R S V T R A 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 0 10 0 1018.5043 Q9NXH9 Q9NXH9 179 188 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.019311 87.149 By MS/MS By matching 4.5 0.5 1 1 1 1 509810 481750 28062 13021 2625 13802 33204;33205 26523 26523 1 4831.7 59791 SVVCEAVIPAK DKKPAAINWIEGRGKSVVCEAVIPAKVVRE GRGKSVVCEAVIPAKVVREVLKTTTEAMIE K S V A K V 2 0 0 0 1 0 1 0 0 1 0 1 0 0 1 1 0 0 0 3 0 0 11 0 1171.6271 P04035 P04035 705 715 HMGCR 3-hydroxy-3-methylglutaryl-coenzyme A reductase yes yes 2 0.042106 82.749 By MS/MS 1 0 1 1 0 0 0 13022 463 13803 33206 26524 26524 1 0 0 SVVCQESDLPDELLYGR CESQECVTKLLQLQRSVVCQESDLPDELLY VCQESDLPDELLYGRAGYLYALLYLNTEIG R S V G R A 0 1 0 2 1 1 2 1 0 0 3 0 0 0 1 2 0 0 1 2 0 0 17 0 1978.9306 Q9NS86 Q9NS86 184 200 LANCL2 LanC-like protein 2 yes yes 2 0.00057782 170.79 By MS/MS 7 0 1 1 141500 141500 0 13023 2567 13804 33207 26525 26525 1 2221.4 0 SVVGTPAYLAPEVLR DFGFARIIGEKSFRRSVVGTPAYLAPEVLR SVVGTPAYLAPEVLRSKGYNRSLDMWSVGV R S V L R S 2 1 0 0 0 0 1 1 0 0 2 0 0 0 2 1 1 0 1 3 0 0 15 0 1570.8719 O94806;Q15139 O94806 735 749 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 yes no 2 4.9548E-07 208.74 By MS/MS 4.5 0.5 1 1 2 1157900 1157900 0 13024 367 13805 33208;33209 26526 26526 1 99161 0 SVVLNDVFLSK TSGLWSIWYRNHFDRSVVLNDVFLSKETKH HFDRSVVLNDVFLSKETKHMLKILNFTGPL R S V S K E 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 3 0 0 11 0 1219.6812 A2VDJ0 A2VDJ0 419 429 KIAA0922 Transmembrane protein 131-like yes yes 2 0.0050027 103.91 By MS/MS 2 0 1 1 101340 101340 0 13025 13 13806 33210 26527;26528 26527 2 34278 0 SVVSLKNEEENENSISQYK KEELLGTKEIEEYKKSVVSLKNEEENENSI LKNEEENENSISQYKESVKRLLNVT_____ K S V Y K E 0 0 3 0 0 1 4 0 0 1 1 2 0 0 0 4 0 0 1 2 0 0 19 1 2196.0546 P82673 P82673 295 313 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 3 0.00019799 114.28 By MS/MS 7 0 1 1 2847400 2847400 0 13026 1232 13807 33211 26529 26529 1 44699 0 SVVTSIFGVK ENPKGDNRLDLLKLKSVVTSIFGVKNTELA LLKLKSVVTSIFGVKNTELAVFHDETEIQN K S V V K N 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 2 1 0 0 3 0 0 10 0 1035.5964 P41252 P41252 1116 1125 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00011009 153.24 By MS/MS 4.5 1.12 1 1 1 1 4 2915600 2915600 0 13027 871 13808 33212;33213;33214;33215 26530;26531;26532;26533 26530 4 37705 0 SVVTVIDVFYK ______________________________ DLLRSVVTVIDVFYKYTKQDGECGTLSKGE R S V Y K Y 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 1 4 0 0 11 0 1268.7016 CON__Q5D862;Q5D862 CON__Q5D862 7 17 FLG2 Filaggrin-2 yes no 2 1.0606E-05 174.86 By MS/MS By MS/MS 5.67 3.09 1 1 1 2 1 222870 128120 94756 + 13028 67 13809 33216;33217;33218 26534;26535;26536 26534 3 9323.7 12061 SVYSWDIVVQR FATDAILATLMSCTRSVYSWDIVVQRVGSK SCTRSVYSWDIVVQRVGSKLFFDKRDNSDF R S V Q R V 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 1 1 3 0 0 11 0 1350.6932 O15371 O15371 261 271 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 3.242E-06 179.51 By MS/MS 6 0.816 1 1 1 3 2010500 2010500 0 13029 185 13810 33219;33220;33221 26537 26537 1 16137 0 SWFEGQGLAGK AERENFHRLCENYIKSWFEGQGLAGKLRAI NYIKSWFEGQGLAGKLRAIQTVSCLLQGPC K S W G K L 1 0 0 0 0 1 1 3 0 0 1 1 0 1 0 1 0 1 0 0 0 0 11 0 1178.572 Q9H3U1 Q9H3U1 401 411 UNC45A Protein unc-45 homolog A yes yes 2 0.00012216 169.65 By MS/MS 4.5 0.5 1 1 2 1581500 1581500 0 13030 2442 13811 33222;33223 26538 26538 1 125620 0 SWLFGINK ______________________________ ______________________________ M S W N K G 0 0 1 0 0 0 0 1 0 1 1 1 0 1 0 1 0 1 0 0 0 0 8 0 963.5178 Q9NVI7 Q9NVI7 2 9 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.014217 104.37 By MS/MS 5.5 0.5 1 1 2 531900 531900 0 13031 2598 13812 33224;33225 26539;26540 26540 2 5334.7 0 SWLFGINKGPK ______________________________ ______________________________ M S W P K G 0 0 1 0 0 0 0 2 0 1 1 2 0 1 1 1 0 1 0 0 0 0 11 1 1245.687 Q9NVI7 Q9NVI7 2 12 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.027059 81.525 By MS/MS 5 0 2 2 317480 317480 0 13032 2598 13813 33226;33227 26541;26542 26541 2 3184.2 0 SWLFGVNK ______________________________ ______________________________ M S W N K G 0 0 1 0 0 0 0 1 0 0 1 1 0 1 0 1 0 1 0 1 0 0 8 0 949.50215 Q5T9A4 Q5T9A4 2 9 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.03609 89.296 By MS/MS 5.5 0.5 1 1 2 336760 336760 0 13033 1638 13814 33228;33229 26543 26543 1 3254.7 0 SWLFGVNKGPK ______________________________ ______________________________ M S W P K G 0 0 1 0 0 0 0 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 11 1 1231.6713 Q5T9A4 Q5T9A4 2 12 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.001844 112.11 By MS/MS 5 0 1 1 365800 365800 0 13034 1638 13815 33230 26544 26544 1 3668.8 0 SWNETLTSR EIIPQNQKAIASSLKSWNETLTSRLAALPE IASSLKSWNETLTSRLAALPENPPAIDWAY K S W S R L 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 2 1 0 0 0 0 9 0 1092.52 O75947 O75947 33 41 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.00026215 154.01 By MS/MS 9 0 1 1 9363400 9363400 0 13035 356 13816 33231 26545 26545 1 184270 0 SWQDELAQQAEEGSAR ______________________________ WQDELAQQAEEGSARLREMLSVGLGFLRTE R S W A R L 3 1 0 1 0 3 3 1 0 0 1 0 0 0 0 2 0 1 0 0 0 0 16 0 1803.8024 Q86UE4 Q86UE4 5 20 MTDH Protein LYRIC yes yes 2 4.249E-70 361.58 By MS/MS 5 0 1 1 1309100 1309100 0 13036 1819 13817 33232 26546 26546 1 13129 0 SWTAADTAAQITQR AYDGKDYIALNEDLRSWTAADTAAQITQRK RSWTAADTAAQITQRKLEAARAAEQLRAYL R S W Q R K 4 1 0 1 0 2 0 0 0 1 0 0 0 0 0 1 3 1 0 0 0 0 14 0 1518.7427 P01889;P10321 P10321 156 169 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain no no 2 1.1527E-16 299.29 By MS/MS 7.5 0.5 1 1 2 3545200 3545200 0 13037 558;456 13818 33233;33234 26547 26547 1 54857 0 SYAEELAK GEWAVVTGSTDGIGKSYAEELAKHGMKVVL STDGIGKSYAEELAKHGMKVVLISRSKDKL K S Y A K H 2 0 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 909.44436 Q53GQ0 Q53GQ0 65 72 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.0068542 116.9 By MS/MS 7.5 0.5 1 1 2 31076000 31076000 0 13038 1587 13819 33235;33236 26548 26548 1 392720 0 SYCAEIAHNVSSK VHNVKELEVLLMCNKSYCAEIAHNVSSKNR NKSYCAEIAHNVSSKNRKAIVERAAQLAIR K S Y S K N 2 0 1 0 1 0 1 0 1 1 0 1 0 0 0 3 0 0 1 1 0 0 13 0 1464.6667 P62910 P62910 94 106 RPL32 60S ribosomal protein L32 yes yes 2 1.6298E-07 205.12 By MS/MS 9.5 0.5 1 1 2 2289200 2289200 0 13039 1185 13820 33237;33238 26549;26550 26549 2 52754 0 SYCSNLVR MHFGAITCAMGIRFKSYCSNLVRTLMVDPS AMGIRFKSYCSNLVRTLMVDPSQEVQENYN K S Y V R T 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 8 0 997.46511 Q9Y5B9 Q9Y5B9 281 288 SUPT16H FACT complex subunit SPT16 yes yes 2 0.023054 96.253 By MS/MS 2 0.816 1 1 1 3 629370 629370 0 13040 2909 13821 33239;33240;33241 26551 26551 1 125910 0 SYDLSDITQADLSR LSNRRLKHFPRGAARSYDLSDITQADLSRN RSYDLSDITQADLSRNRFPEVPEAACQLVS R S Y S R N 1 1 0 3 0 1 0 0 0 1 2 0 0 0 0 3 1 0 1 0 0 0 14 0 1582.7475 O75427 O75427 64 77 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 5.9377E-24 281.17 By MS/MS 5 0 1 1 4654000 4654000 0 13041 326 13822 33242 26552 26552 1 46678 0 SYDSLPNFTAADCLR SYYTGIMEDIMNSEKSYDSLPNFTAADCLR SYDSLPNFTAADCLRLLGIGRNQYIDLMNQ K S Y L R L 2 1 1 2 1 0 0 0 0 0 2 0 0 1 1 2 1 0 1 0 0 0 15 0 1728.7777 Q658Y4 Q658Y4 111 125 FAM91A1 Protein FAM91A1 yes yes 2 5.0217E-07 208.51 By MS/MS 4 0 1 1 1009500 1009500 0 13042 1668 13823 33243 26553 26553 1 95000 0 SYEAYVLNIVR QIQKTEISFRPNDPKSYEAYVLNIVRFLEK NDPKSYEAYVLNIVRFLEKYKDSAQRDDMI K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 P05026 P05026 97 107 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 2 3.3749E-09 211.52 By MS/MS 6.5 0.5 1 1 2 1565900 1565900 0 13043 482 13824 33244;33245 26554;26555 26554 2 11545 0 SYEDATKITVR NKSKDSLVDIIGICKSYEDATKITVRSNNR GICKSYEDATKITVRSNNREVAKRNIYLMD K S Y V R S 1 1 0 1 0 0 1 0 0 1 0 1 0 0 0 1 2 0 1 1 0 0 11 1 1281.6565 P27694 P27694 325 335 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.048277 79.974 By MS/MS 5 0 1 1 474150 474150 0 13044 744 13825 33246 26556 26556 1 4755.4 0 SYEECIIESR DDGVPCVFPFIFNGKSYEECIIESRAKLWC IFNGKSYEECIIESRAKLWCSTTADYDRDH K S Y S R A 0 1 0 0 1 0 3 0 0 2 0 0 0 0 0 2 0 0 1 0 0 0 10 0 1284.5656 P11717 P11717 1913 1922 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 1.0665E-05 174.02 By MS/MS 2 0.816 1 1 1 3 1358500 1358500 0 13045 583 13826 33247;33248;33249 26557;26558;26559 26558 3 298650 0 SYEEHLEK RSLEARIIALSVKIRSYEEHLEKHRKDKAH ALSVKIRSYEEHLEKHRKDKAHKRYLLMSI R S Y E K H 0 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 1033.4716 P82914 P82914 138 145 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.00035906 162.25 By MS/MS 8.5 0.5 1 1 2 2601100 2601100 0 13046 1235 13827 33250;33251 26560;26561 26561 2 40095 0 SYELPDGQVITIGNER EQEMATAASSSSLEKSYELPDGQVITIGNE YELPDGQVITIGNERFRCPEALFQPSFLGM K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;Q9BYX7;P63261;Q562R1 P63261 239 254 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEKP;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2;3 3.2695E-07 214.48 By MS/MS By MS/MS 7.36 1.04 2 8 2 1 1 10 4 58037000 57241000 796050 13047 1095;1203;1594 13828 33252;33253;33254;33255;33256;33257;33258;33259;33260;33261;33262;33263;33264;33265 26562;26563;26564;26565;26566;26567;26568;26569;26570;26571;26572;26573;26574;26575 26566 14 876890 1391400 SYELQESNVR DPATHNEPGVRLKARSYELQESNVRLKLTI RLKARSYELQESNVRLKLTIVDTVGFGDQI R S Y V R L 0 1 1 0 0 1 2 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1223.5782 Q9NVA2 Q9NVA2 84 93 SEPT11 Septin-11 yes yes 2 2.1212E-11 223.84 By MS/MS 6 0 1 1 2082900 2082900 0 13048 2592 13829 33266 26576 26576 1 14318 0 SYESLFIR SLPGAEDYIKDLETKSYESLFIRAVRAYNG IKDLETKSYESLFIRAVRAYNGENWRTSIT K S Y I R A 0 1 0 0 0 0 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 0 8 0 1013.5182 O75718 O75718 205 212 CRTAP Cartilage-associated protein yes yes 2 0.0075048 113.89 By MS/MS 6.5 0.5 1 1 2 666440 666440 0 13049 343 13830 33267;33268 26577 26577 1 8048.3 0 SYESQIEVMAAEVAK TSYKQQLEAVNEAIKSYESQIEVMAAEVAK SYESQIEVMAAEVAKNKESVNKAQEEVTKQ K S Y A K N 3 0 0 0 0 1 3 0 0 1 0 1 1 0 0 2 0 0 1 2 0 0 15 0 1653.792 O95347 O95347 849 863 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00043499 166.38 By MS/MS 3 0 1 1 55473 55473 0 13050 405 13831 33269 26578 26578 1 1015 0 SYEVTVENFLR MELNVYGDDVEVDYRSYEVTVENFLRVLTG VDYRSYEVTVENFLRVLTGRIPPSTPRSKR R S Y L R V 0 1 1 0 0 0 2 0 0 0 1 0 0 1 0 1 1 0 1 2 0 0 11 0 1355.6721 Q92643 Q92643 123 133 PIGK GPI-anchor transamidase yes yes 2 3.6062E-13 234.81 By MS/MS 7 0 1 1 424100 424100 0 13051 2066 13832 33270 26579 26579 1 6657.6 0 SYFLIVR AREQRDCEVIERLIKSYFLIVRKNIQDSVP EVIERLIKSYFLIVRKNIQDSVPKAVMHFL K S Y V R K 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 1 1 0 0 7 0 896.51199 O00429 O00429 653 659 DNM1L Dynamin-1-like protein yes yes 2 0.025327 108.24 By MS/MS 5 0 1 1 556120 556120 0 13052 105 13833 33271 26580 26580 1 5577.6 0 SYGATATSPGER SYLTWGVLQERVMTRSYGATATSPGERFTD MTRSYGATATSPGERFTDSQFLVLMNRVLA R S Y E R F 2 1 0 0 0 0 1 2 0 0 0 0 0 0 1 2 2 0 1 0 0 0 12 0 1195.5469 Q8TB61 Q8TB61 137 148 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.00038367 155.53 By MS/MS 1 0 1 1 0 0 0 13053 1981 13834 33272 26581 26581 1 0 0 SYGIPFIETSAK PTRTVDTKQAHELAKSYGIPFIETSAKTRQ LAKSYGIPFIETSAKTRQGVEDAFYTLVRE K S Y A K T 1 0 0 0 0 0 1 1 0 2 0 1 0 1 1 2 1 0 1 0 0 0 12 0 1311.6711 P01111;P01116 P01111 136 147 NRAS;KRAS GTPase NRas;GTPase KRas;GTPase KRas, N-terminally processed yes no 2 0.044336 72.321 By MS/MS 9 0 1 1 246190 246190 0 13054 450 13835 33273 26582 26582 1 4845 0 SYGNSSDSR LFFKTLLQQDVKKRRSYGNSSDSRYDDGRG DVKKRRSYGNSSDSRYDDGRGPPGNPPRRM R S Y S R Y 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 4 0 0 1 0 0 0 9 0 971.39445 Q9Y6D0 Q9Y6D0 51 59 SELK Selenoprotein K yes yes 2 0.010432 99.688 By MS/MS 10 0 1 1 284210 284210 0 13055 2939 13836 33274 26583 26583 1 15318 0 SYIFEGALGMSNR ALMITVPIGLYFTTKSYIFEGALGMSNRDS TKSYIFEGALGMSNRDSYFYAAIVAVVAVH K S Y N R D 1 1 1 0 0 0 1 2 0 1 1 0 1 1 0 2 0 0 1 0 0 0 13 0 1443.6816 Q3ZAQ7 Q3ZAQ7 50 62 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 6.7358E-05 176.8 By MS/MS 10 0 1 1 294730 294730 0 13056 1579 13837 33275 26584 26584 882 1 15885 0 SYLAQFAAR LDQCPKLEVDIPLVKSYLAQFAARAIISEL DIPLVKSYLAQFAARAIISELVSISELAQP K S Y A R A 3 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 9 0 1025.5294 P78344 P78344 641 649 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00078091 145.16 By MS/MS 4.5 0.5 1 1 2 12420000 12420000 0 13057 1219 13838 33276;33277 26585;26586 26585 2 1050200 0 SYLENPAFMLLDLK VIDGATMSRFSNLWKSYLENPAFMLLDLK_ KSYLENPAFMLLDLK_______________ K S Y L K - 1 0 1 1 0 0 1 0 0 0 4 1 1 1 1 1 0 0 1 0 0 0 14 0 1652.8484 P11182 P11182 469 482 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 2 1.9402E-07 215.77 By MS/MS 6 0 2 2 233960 233960 0 13058 576 13839;13840 33278;33279 26587;26588;26589;26590 26587 269 4 1608.3 0 SYLTEQVNQDLPK SLPKDFWEQEVRDIRSYLTEQVNQDLPKEV IRSYLTEQVNQDLPKEVLAELEALERRVHK R S Y P K E 0 0 1 1 0 2 1 0 0 0 2 1 0 0 1 1 1 0 1 1 0 0 13 0 1533.7675 Q16822 Q16822 612 624 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.00019422 163.45 By MS/MS 5 0 1 1 829480 829480 0 13059 1560 13841 33280 26591 26591 1 8319.2 0 SYNDELQFLEK ______________________________ ______________________________ R S Y E K I 0 0 1 1 0 1 2 0 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1384.6511 Q9Y3I0 Q9Y3I0 4 14 RTCB tRNA-splicing ligase RtcB homolog yes yes 2 2.9456E-09 213.35 By MS/MS 7 0.816 1 1 1 3 7414000 7414000 0 13060 2878 13842 33281;33282;33283 26592 26592 1 53780 0 SYNRFQIATVTEK LVERCMRVLYYRDARSYNRFQIATVTEKGV ARSYNRFQIATVTEKGVEIEGPLSTETNWD R S Y E K G 1 1 1 0 0 1 1 0 0 1 0 1 0 1 0 1 2 0 1 1 0 0 13 1 1555.7995 P28070 P28070 228 240 PSMB4 Proteasome subunit beta type-4 yes yes 2;3 0.00048436 173.76 By MS/MS 8.33 0.471 2 1 3 3171900 3171900 0 13061 749 13843 33284;33285;33286 26593;26594 26594 2 40932 0 SYPGSQLDILIDQGK DQSKWKAYDATHLVKSYPGSQLDILIDQGK SYPGSQLDILIDQGKDDQFLLDGQLLPDNF K S Y G K D 0 0 0 2 0 2 0 2 0 2 2 1 0 0 1 2 0 0 1 0 0 0 15 0 1632.8359 P10768 P10768 210 224 ESD S-formylglutathione hydrolase yes yes 2 0.00056942 160.48 By MS/MS 8 0 1 1 272150 272150 0 13062 568 13844 33287 26595 26595 1 3435.9 0 SYQFGIIGNDR QQDWSRDFCIEASERSYQFGIIGNDRVSGA ASERSYQFGIIGNDRVSGAGFSPSSKMEGG R S Y D R V 0 1 1 1 0 1 0 2 0 2 0 0 0 1 0 1 0 0 1 0 0 0 11 0 1268.6149 Q9C0C2 Q9C0C2 1121 1131 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.00062811 129 By MS/MS 2 0 1 1 341010 341010 0 13063 2390 13845 33288 26596 26596 1 115340 0 SYQGELK FKLEVGRFGQLTYVRSYQGELKKGDTIYNT FGQLTYVRSYQGELKKGDTIYNTRTRKKVR R S Y L K K 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 7 0 823.40758 Q96RP9 Q96RP9 373 379 GFM1 Elongation factor G, mitochondrial yes yes 2 0.041707 95.909 By MS/MS 5.5 0.5 1 1 2 2697400 2697400 0 13064 2223 13846 33289;33290 26597 26597 1 25092 0 SYQGELKKGDTIYNTR FKLEVGRFGQLTYVRSYQGELKKGDTIYNT YQGELKKGDTIYNTRTRKKVRLQRLARMHA R S Y T R T 0 1 1 1 0 1 1 2 0 1 1 2 0 0 0 1 2 0 2 0 0 0 16 2 1871.9377 Q96RP9 Q96RP9 373 388 GFM1 Elongation factor G, mitochondrial yes yes 3 0.0060911 95.073 By MS/MS 5.5 0.5 1 1 2 3923300 3923300 0 13065 2223 13847 33291;33292 26598 26598 1 36317 0 SYQSFQTFR NLIQSTLALSDSQMKSYQSFQTFRLYREYK SDSQMKSYQSFQTFRLYREYKDHVLVKAFM K S Y F R L 0 1 0 0 0 2 0 0 0 0 0 0 0 2 0 2 1 0 1 0 0 0 9 0 1162.5407 Q12789 Q12789 1446 1454 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0083999 103.26 By MS/MS 2 0 1 1 847820 847820 0 13066 1328 13848 33293 26599 26599 1 286770 0 SYQYLVESIR QVIPVLGEVIAGDWKSYQYLVESIRRFPSQ AGDWKSYQYLVESIRRFPSQEEFKDMIEDA K S Y I R R 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 2 0 0 2 1 0 0 10 0 1256.6401 Q5HYK3 Q5HYK3 280 289 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.0010668 138.22 By MS/MS 8 0 1 1 389970 389970 0 13067 1602 13849 33294 26600 26600 1 4923.3 0 SYSEDDIHR DFDWNLKHGRVFIIKSYSEDDIHRSIKYNI RVFIIKSYSEDDIHRSIKYNIWCSTEHGNK K S Y H R S 0 1 0 2 0 0 1 0 1 1 0 0 0 0 0 2 0 0 1 0 0 0 9 0 1120.4785 Q9Y5A9;Q7Z739 Q9Y5A9 417 425 YTHDF2;YTHDF3 YTH domain-containing family protein 2;YTH domain-containing family protein 3 no no 2 0.00042714 143.73 By MS/MS 5.5 0.5 1 1 2 4440000 4440000 0 13068 2908;1803 13850 33295;33296 26601 26601 1 42173 0 SYSGENTASAIAR HYQPRGQLLSWFYYKSYSGENTASAIARSA YKSYSGENTASAIARSAAATALSLLVPVFI K S Y A R S 3 1 1 0 0 0 1 1 0 1 0 0 0 0 0 3 1 0 1 0 0 0 13 0 1325.6212 Q5VW36 Q5VW36 1028 1040 FOCAD Focadhesin yes yes 2 6.7391E-05 177.04 By MS/MS 3 0 1 1 413260 413260 0 13069 1654 13851 33297 26602 26602 1 7561.6 0 SYSPTLFAQTVR GDEENFCATVPKDGRSYSPTLFAQTVRVLK DGRSYSPTLFAQTVRVLKKINKPGNMIMAF R S Y V R V 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 2 2 0 1 1 0 0 12 0 1368.7038 Q14139 Q14139 938 949 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 1.1005E-05 190.57 By MS/MS 3.5 0.5 1 1 2 1417900 1417900 0 13070 1421 13852 33298;33299 26603;26604 26604 2 101310 0 SYSQSSNLFR IHTGEKPYECVQCGKSYSQSSNLFRHQRRH VQCGKSYSQSSNLFRHQRRHNAEKLLNVVK K S Y F R H 0 1 1 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 0 10 0 1187.5571 P17028 P17028 343 352 ZNF24 Zinc finger protein 24 yes yes 2 0.00044964 134.26 By MS/MS 7 0 1 1 795410 795410 0 13071 638 13853 33300 26605 26605 1 12487 0 SYSSGGEDGYVR HFGPINSVAFHPDGKSYSSGGEDGYVRIHY DGKSYSSGGEDGYVRIHYFDPQYFEFEFEA K S Y V R I 0 1 0 1 0 0 1 3 0 0 0 0 0 0 0 3 0 0 2 1 0 0 12 0 1275.5368 Q13347 Q13347 299 310 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 2.0176E-08 204.34 By MS/MS By MS/MS 8.22 1.13 3 3 1 2 7 2 61240000 60694000 546550 13072 1372 13854 33301;33302;33303;33304;33305;33306;33307;33308;33309 26606;26607;26608;26609;26610;26611;26612;26613;26614;26615;26616 26608 11 951050 919720 SYSTTYEER ARNIFPSNLVSAAFRSYSTTYEERNITGTR VSAAFRSYSTTYEERNITGTRVKVPVGQEV R S Y E R N 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 2 2 0 2 0 0 0 9 0 1134.4829 Q15758 Q15758 203 211 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.0022754 117.81 By MS/MS 3 2 1 1 2 663780 663780 0 13073 1530 13855 33310;33311 26617;26618 26618 2 43271 0 SYTCKPLER LCAYMAAFNSINGNRSYTCKPLERSLLMAG SINGNRSYTCKPLERSLLMAGAVASSTFLG R S Y E R S 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 9 1 1152.5597 Q6P4A7 Q6P4A7 156 164 SFXN4 Sideroflexin-4 yes yes 2 0.021379 110.41 By MS/MS 7.5 0.5 1 1 2 2236400 2236400 0 13074 1710 13856 33312;33313 26619 26619 1 33690 0 SYVIDYYLPK SPLLFILCEGNLDQKSYVIDYYLPKLLSYS NLDQKSYVIDYYLPKLLSYSPESLQYMVKI K S Y P K L 0 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 0 0 3 1 0 0 10 0 1259.6438 Q6YHU6 Q6YHU6 543 552 THADA Thyroid adenoma-associated protein yes yes 2 0.018295 87.639 By MS/MS 2 0 1 1 57333 57333 0 13075 1739 13857 33314 26620 26620 1 19392 0 SYVLPEVICR VGEFSEEAQFRDPCRSYVLPEVICRSCNFC RDPCRSYVLPEVICRSCNFCRDLDLCKDSS R S Y C R S 0 1 0 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 2 0 0 10 0 1234.638 Q07864 Q07864 2150 2159 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.038927 77.677 By MS/MS 2 0 1 1 136490 136490 0 13076 1302 13858 33315 26621 26621 1 46167 0 SYVLVESVCK GGNRSSSREQELALRSYVLVESVCKSLQTL ELALRSYVLVESVCKSLQTLAMAVASQNAV R S Y C K S 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 0 0 1 3 0 0 10 0 1182.5955 Q9NU22 Q9NU22 301 310 MDN1 Midasin yes yes 2 2.8494E-05 163.32 By MS/MS 3 1.41 1 1 1 1 1 5 1782900 1782900 0 13077 2580 13859 33316;33317;33318;33319;33320 26622;26623 26623 2 255480 0 SYVSEKDVTSAK PELNEKEEAYNSLMKSYVSEKDVTSAKALY LMKSYVSEKDVTSAKALYEHLTAKNTKLDD K S Y A K A 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 3 1 0 1 2 0 0 12 1 1312.6511 P42704 P42704 1327 1338 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.4051E-05 194.48 By MS/MS By MS/MS 4.09 2.07 1 1 4 1 1 1 1 1 10 1 22677000 22431000 245100 13078 886 13860 33321;33322;33323;33324;33325;33326;33327;33328;33329;33330;33331 26624;26625;26626;26627;26628;26629;26630 26626 7 583790 31197 SYWLDNFAK IPYAGIDLAVYELLKSYWLDNFAKDSVNPG VYELLKSYWLDNFAKDSVNPGVMVLLGCGA K S Y A K D 1 0 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 0 9 0 1142.5397 Q6NUK1 Q6NUK1 370 378 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.00058524 144.09 By MS/MS 7 0 1 1 582870 582870 0 13079 1687 13861 33332 26631 26631 1 9150.1 0 TAAAAAEHSQR EAATGGGSTGEADGKTAAAAAEHSQRELDT ADGKTAAAAAEHSQRELDTVTLEDIKEHVK K T A Q R E 5 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 11 0 1111.537 O43242 O43242 55 65 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2;3 2.2862E-11 192.64 By MS/MS By MS/MS 5 1.69 1 2 4 4 3 4031100 3953100 78006 13080 198 13862 33333;33334;33335;33336;33337;33338;33339 26632;26633;26634;26635;26636;26637 26635 6 44103 78465 TAAALAPASLTSAR RSAHATAPVNIAGSRTAAALAPASLTSARM RTAAALAPASLTSARMAPALSGANLTSPRV R T A A R M 6 1 0 0 0 0 0 0 0 0 2 0 0 0 1 2 2 0 0 0 0 0 14 0 1299.7147 Q9UQ35 Q9UQ35 2357 2370 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.02142 95.094 By MS/MS 1 0 1 1 150860 150860 0 13081 2804 13863 33340 26638 26638 1 36353 0 TAAANAAAGAAENAFR QQEFAAGVFSNPAVRTAAANAAAGAAENAF AAANAAAGAAENAFRAP_____________ R T A F R A 9 1 2 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 16 0 1475.7117 O14828 O14828 330 345 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 1.9467E-24 288.29 By MS/MS By matching 5 2.9 1 1 2 1 4 1 7498200 7446800 51446 13082 141 13864 33341;33342;33343;33344;33345 26639;26640;26641 26641 3 244800 92654 TAAANAAAGAAENAFRAP QQEFAAGVFSNPAVRTAAANAAAGAAENAF ANAAAGAAENAFRAP_______________ R T A A P - 10 1 2 0 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 18 1 1643.8016 O14828 O14828 330 347 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 1.7303E-06 212.03 By MS/MS 7.14 2.7 1 2 2 1 1 7 14426000 14426000 0 13083 141 13865 33346;33347;33348;33349;33350;33351;33352 26642;26643;26644;26645 26643 4 256010 0 TAADKDRGEEDADGSK KLNKAEKAWKPSSKRTAADKDRGEEDADGS AADKDRGEEDADGSKTQDLFRRVRSILNKL R T A S K T 3 1 0 4 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 16 2 1663.7285 Q04637 Q04637 741 756 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.1727E-10 211.82 By MS/MS 2 0 4 4 3332400 3332400 0 13084 1291 13866 33353;33354;33355;33356 26646;26647;26648;26649 26649 4 1127100 0 TAADVVSPGANSVDSR IQSLKEKTEKVKDPKTAADVVSPGANSVDS AADVVSPGANSVDSRVQRPKEESSEDENEV K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 4.8068E-07 212.1 By MS/MS By matching 2.5 0.5 1 1 1 1 607980 489340 118640 13085 1270 13867 33357;33358 26650 26650 1 8953.6 167780 TAAENDFVTLK VEDYKKKYEDEINKRTAAENDFVTLKKDVD INKRTAAENDFVTLKKDVDNAYMIKVELQS R T A L K K 2 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1207.6085 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 276 286 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 5.2502E-13 228.64 By MS/MS By MS/MS 5.53 3.1 2 2 2 2 1 1 1 2 2 7 8 50882000 35854000 15029000 + 13086 55 13868 33359;33360;33361;33362;33363;33364;33365;33366;33367;33368;33369;33370;33371;33372;33373 26651;26652;26653;26654;26655;26656;26657;26658;26659;26660;26661;26662;26663;26664;26665 26665 15 2842600 20610000 TAAENDFVTLKK VEDYKKKYEDEINKRTAAENDFVTLKKDVD NKRTAAENDFVTLKKDVDNAYMIKVELQSK R T A K K D 2 0 1 1 0 0 1 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 12 1 1335.7034 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 276 287 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 6.7825E-20 240 By MS/MS By MS/MS 5.32 2.9 4 4 4 4 4 4 2 4 3 4 18 19 428150000 190860000 237280000 + 13087 55 13869 33374;33375;33376;33377;33378;33379;33380;33381;33382;33383;33384;33385;33386;33387;33388;33389;33390;33391;33392;33393;33394;33395;33396;33397;33398;33399;33400;33401;33402;33403;33404;33405;33406;33407;33408;33409;33410 26666;26667;26668;26669;26670;26671;26672;26673;26674;26675;26676;26677;26678;26679;26680;26681;26682;26683;26684;26685;26686;26687;26688;26689;26690;26691;26692;26693;26694;26695;26696;26697;26698;26699 26671 34 14897000 105580000 TAAENEFVTLK VEDLKNKYEDEINKRTAAENEFVTLKKDVD INKRTAAENEFVTLKKDVDAAYMNKVELQA R T A L K K 2 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1221.6241 CON__P02538;P02538;CON__P04259;CON__P48668;P48668;CON__P12035;P12035 CON__P04259 261 271 KRT6A;KRT6C;KRT3 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3 no no 2 5.4331E-10 169.93 By MS/MS By MS/MS 5.11 3.03 1 2 1 2 2 1 4 5 2951100 2035000 916140 + 13088 44;56;40;48 13870 33411;33412;33413;33414;33415;33416;33417;33418;33419 26700;26701;26702;26703;26704;26705;26706;26707 26705 6 83678 1120600 TAAENEFVTLKK VEDLKNKYEDEINKRTAAENEFVTLKKDVD NKRTAAENEFVTLKKDVDAAYMNKVELQAK R T A K K D 2 0 1 0 0 0 2 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 12 1 1349.7191 CON__P02538;P02538;CON__P04259;CON__P48668;P48668;CON__P12035;P12035 CON__P04259 261 272 KRT6A;KRT6C;KRT3 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3 no no 2 5.0408E-08 185.99 By MS/MS By MS/MS 4.71 2.91 1 1 1 1 1 1 1 5 2 10018000 8243600 1774700 + 13089 44;56;40;48 13871 33420;33421;33422;33423;33424;33425;33426 26708;26709;26710 26708 3 535710 2047700 TAAENEFVVLK VEDYKKRYEVEINRRTAAENEFVVLKKDVD INRRTAAENEFVVLKKDVDAAYMNKVELQA R T A L K K 2 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 11 0 1219.6449 CON__Q14CN4-1;CON__Q6IME9;Q14CN4 CON__Q14CN4-1 223 233 KRT72 Keratin, type II cytoskeletal 72 no no 2 0.0035492 123.86 By MS/MS 10 0 1 1 54498 0 54498 + 13090 60 13872 33427 26711 26711 1 0 69772 TAAFVQR ______________________________ ______________________________ R T A Q R H 2 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 7 0 791.42899 Q53S58 Q53S58 8 14 TMEM177 Transmembrane protein 177 yes yes 2 0.01405 124.89 By MS/MS 6.5 1.12 1 1 1 1 4 2875800 2875800 0 13091 1592 13873 33428;33429;33430;33431 26712 26712 1 32081 0 TAALAVVTTSGLEDGVPR ______________________________ LAVVTTSGLEDGVPRSRGEGTGEVVLERGP M T A P R S 3 1 0 1 0 0 1 2 0 0 2 0 0 0 1 1 3 0 0 3 0 0 18 0 1755.9367 Q9NWB7 Q9NWB7 2 19 IFT57 Intraflagellar transport protein 57 homolog yes yes 2 0.00030243 148.89 By MS/MS 6 0 1 1 813460 813460 0 13092 2609 13874 33432 26713 26713 1 5591.9 0 TAASGAAGDKDTK GLAADKKEFKPLPGRTAASGAAGDKDTKDI GRTAASGAAGDKDTKDISAPKPGPLKKAPA R T A T K D 4 0 0 2 0 0 0 2 0 0 0 2 0 0 0 1 2 0 0 0 0 0 13 1 1191.5731 Q14008 Q14008 521 533 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00026429 178.53 By MS/MS 2 0 1 1 850560 850560 0 13093 1417 13875 33433 26714 26714 1 287690 0 TAATFAR LRTALNLFFKLKNFKTAATFARRLLELGPK FFKLKNFKTAATFARRLLELGPKPEVAQQT K T A A R R 3 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 7 0 736.38679 P53621 P53621 1120 1126 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.014163 124.59 By MS/MS 3 1.41 1 1 1 1 1 5 2292000 2292000 0 13094 1034 13876 33434;33435;33436;33437;33438 26715 26715 1 190800 0 TAATLATHELR LTSQTKLHEDLCEKRTAATLATHELRAVKG CEKRTAATLATHELRAVKGPLLYCARPPQD R T A L R A 3 1 0 0 0 0 1 0 1 0 2 0 0 0 0 0 3 0 0 0 0 0 11 0 1182.6357 Q8N1G4 Q8N1G4 371 381 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2;3 7.4146E-05 132.88 By MS/MS 5 0 2 2 3914500 3914500 0 13095 1906 13877 33439;33440 26716;26717 26716 2 39260 0 TAAYVNAIEK IMRTAMKYNLGLDLRTAAYVNAIEKVFKVY GLDLRTAAYVNAIEKVFKVYNEAGVTFT__ R T A E K V 3 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1078.5659 P00367;P49448 P00367 536 545 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.029112 82.417 By MS/MS By matching 6 0 2 1 1 7126900 7078500 48429 13096 441 13878 33441;33442 26718 26718 1 48659 49626 TADDPSLSLIK FFRSLKDRGFELTFKTADDPSLSLIKYGEF LTFKTADDPSLSLIKYGEFLYDNLIIFSPS K T A I K Y 1 0 0 2 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1158.6132 P39656 P39656 78 88 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 2.2865E-05 154.85 By MS/MS By MS/MS 7.6 1.62 2 1 1 1 4 1 18217000 18144000 72511 13097 855 13879 33443;33444;33445;33446;33447 26719;26720;26721;26722;26723 26720 5 155900 74304 TADFGIWER NFIQNLVFYIEAAYKTADFGIWERGDKTNQ IEAAYKTADFGIWERGDKTNQGISELNASS K T A E R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 9 0 1093.5193 P46020 P46020 178 186 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 0.012513 96.034 By MS/MS 3 0 1 1 52399 52399 0 13098 907 13880 33448 26724 26724 1 958.75 0 TADVTSLFGGEDTSR SVKKLKRAVNLPRSKTADVTSLFGGEDTSR TADVTSLFGGEDTSRSSTRGSLNPENPVQV K T A S R S 1 1 0 2 0 0 1 2 0 0 1 0 0 1 0 2 3 0 0 1 0 0 15 0 1554.7162 O00443 O00443 614 628 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 2 2.4049E-05 198.32 By MS/MS 2.5 0.5 1 1 2 267570 267570 0 13099 107 13881 33449;33450 26725 26725 1 48071 0 TAEAGGVTGK GFSELRWDDQQKVKKTAEAGGVTGKGQDGI QKVKKTAEAGGVTGKGQDGIGSKAEKTLGD K T A G K G 2 0 0 0 0 0 1 3 0 0 0 1 0 0 0 0 2 0 0 1 0 0 10 0 889.45051 P09874 P09874 88 97 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0083855 97.965 By MS/MS 5.5 2.69 1 1 1 1 4 1897600 1897600 0 13100 543 13882 33451;33452;33453;33454 26726;26727;26728 26727 3 126350 0 TAEAGGVTGKGQDGIGSKAEK GFSELRWDDQQKVKKTAEAGGVTGKGQDGI VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS K T A E K T 3 0 0 1 0 1 2 6 0 1 0 3 0 0 0 1 2 0 0 1 0 0 21 2 1959.9861 P09874 P09874 88 108 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 2.3172E-05 118.23 By MS/MS 4 0 1 1 596800 596800 0 13101 543 13883 33455 26729 26729 1 56163 0 TAEELMNFSKGEENLMDAQVK FDGMITETKGTVLIKTAEELMNFSKGEENL NFSKGEENLMDAQVKAIADTGANVVVTGGK K T A V K A 2 0 2 1 0 1 4 1 0 0 2 2 2 1 0 1 1 0 0 1 0 0 21 1 2383.1036 P50990 P50990 261 281 CCT8 T-complex protein 1 subunit theta yes yes 2;3 8.2678E-13 229.22 By MS/MS 6 0 3 3 33380000 33380000 0 13102 984 13884;13885 33456;33457;33458 26730;26731;26732 26731 534 3 229460 0 TAEEVAALIR VWAGQKRLGQLAKWKTAEEVAALIRSLPVE LAKWKTAEEVAALIRSLPVEEQPKQIIVTR K T A I R S 3 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1071.5924 Q6P2Q9 Q6P2Q9 1841 1850 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00037458 135.71 By MS/MS 3 1.41 1 1 1 1 1 5 5375300 5375300 0 13103 1708 13886 33459;33460;33461;33462;33463 26733;26734;26735 26733 3 1283600 0 TAEFQVAR VDISATKAVHISNPKTAEFQVARTTLLPGL VHISNPKTAEFQVARTTLLPGLLKTIAANR K T A A R T 2 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 920.47158 Q9NSD9 Q9NSD9 444 451 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.0028224 138.54 By MS/MS 5 0 1 1 0 0 0 13104 2569 13887 33464 26736 26736 1 0 0 TAELLNACK ENPKMPTGEIEIKVKTAELLNACKKLPFEI IEIKVKTAELLNACKKLPFEIKNFVKKTEA K T A C K K 2 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1018.5117 Q6PI48 Q6PI48 145 153 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.021746 88.177 By MS/MS 5 0 1 1 1824900 1824900 0 13105 1717 13888 33465 26737 26737 1 18303 0 TAENATSGETLEENEAGD ASRKTQKKKKKKASKTAENATSGETLEENE NATSGETLEENEAGD_______________ K T A G D - 3 0 2 1 0 0 5 2 0 0 1 0 0 0 0 1 3 0 0 0 0 0 18 0 1836.7497 Q9UQ80 Q9UQ80 377 394 PA2G4 Proliferation-associated protein 2G4 yes yes 2 1.8304E-46 338.12 By MS/MS 7 0 1 1 1222300 1222300 0 13106 2805 13889 33466 26738 26738 1 19188 0 TAESQTPTPSATSFFSGK SEESSHYSTEKESEKTAESQTPTPSATSFF SQTPTPSATSFFSGKSPVTTLLECMHKLGN K T A G K S 2 0 0 0 0 1 1 1 0 0 0 1 0 2 2 4 4 0 0 0 0 0 18 0 1842.8636 P55265 P55265 596 613 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 2 4.6535E-17 260.29 By MS/MS 4 0 1 1 860310 860310 0 13107 1059 13890 33467 26739;26740 26740 2 80961 0 TAETGYIQR HAMGGREGLIDTAVKTAETGYIQRRLIKSM IDTAVKTAETGYIQRRLIKSMESVMVKYDA K T A Q R R 1 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 9 0 1037.5142 P24928 P24928 854 862 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0013614 129.42 By MS/MS 2 0 1 1 350980 350980 0 13108 717 13891 33468 26741 26741 1 118710 0 TAEVLANK RQLIAQVMLYSQGFRTAEVLANKIVPFFKL LYSQGFRTAEVLANKIVPFFKLCDEQLSSQ R T A N K I 2 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 844.46543 Q14204 Q14204 2061 2068 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0057163 122.18 By MS/MS 1.5 0.5 1 1 2 2210400 2210400 0 13109 1433 13892 33469;33470 26742;26743 26743 2 631410 0 TAFDLLNLNR NLQAEGLTTLGQSLRTAFDLLNLNRLVTGI GQSLRTAFDLLNLNRLVTGIDNYGQGRNPF R T A N R L 1 1 2 1 0 0 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 10 0 1175.6299 Q9UL03 Q9UL03 94 103 INTS6 Integrator complex subunit 6 yes yes 2 2.9546E-05 172.59 By MS/MS 4 0 1 1 156070 156070 0 13110 2768 13893 33471 26744 26744 1 14687 0 TAFETIILLTK VDISGFQLSSHTQYRTAFETIILLTKELEL TQYRTAFETIILLTKELELYKEELQTKPAL R T A T K E 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 3 0 0 0 0 0 11 0 1248.7329 A4D1E9 A4D1E9 249 259 GTPBP10 GTP-binding protein 10 yes yes 2 1.6428E-05 182.46 By MS/MS 7 0 1 1 278850 278850 0 13111 15 13894 33472 26745 26745 1 4377.4 0 TAFGIISTVK STNCRAALLHGETRKTAFGIISTVKKPRPS GETRKTAFGIISTVKKPRPSEGDEDCLPAS K T A V K K 1 0 0 0 0 0 0 1 0 2 0 1 0 1 0 1 2 0 0 1 0 0 10 0 1035.5964 P78346 P78346 237 246 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.01183 101.66 By MS/MS 8 0 1 1 0 0 0 13112 1220 13895 33473 26746 26746 1 0 0 TAFQEALDAAGDK ______________________________ SKTAFQEALDAAGDKLVVVDFSATWCGPCK K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 0.00030638 155.88 By MS/MS By MS/MS 6.75 3.27 1 1 2 2 2 3102300 2678200 424170 13113 563 13896 33474;33475;33476;33477 26747;26748 26748 2 159890 79484 TAFVNSCYIK FGHRLQENFSLDLLKTAFVNSCYIKSEEAK LDLLKTAFVNSCYIKSEEAKRQQLGIEKEA K T A I K S 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 1 1 0 1 1 0 0 10 0 1201.5801 Q9H9J2 Q9H9J2 90 99 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.0079202 99.013 By MS/MS 7.5 0.5 1 1 2 4171900 4171900 0 13114 2487 13897 33478;33479 26749 26749 1 55467 0 TAFYTDLEEALMR AFESLRFDPKRKRLRTAFYTDLEEALMRWY LRTAFYTDLEEALMRWYRIAQCLNVPVNGP R T A M R W 2 1 0 1 0 0 2 0 0 0 2 0 1 1 0 0 2 0 1 0 0 0 13 0 1558.7337 Q8IY51 Q8IY51 81 93 TIGD4 Tigger transposable element-derived protein 4 yes yes 4 0.051431 42.809 By MS/MS 5 0 1 1 355900 355900 0 13115 1882 13898 33480 26750 26750 956 0 3569.5 0 TAGINVR STVTELRNRHAQGEKTAGINVRKGGISNIL NRHAQGEKTAGINVRKGGISNILEELVVQP K T A V R K 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 729.41334 P50991 P50991 490 496 CCT4 T-complex protein 1 subunit delta yes yes 2 0.021611 111.04 By MS/MS By matching 6.75 0.829 2 1 1 3 1 32735000 32630000 105210 13116 985 13899 33481;33482;33483;33484 26751 26751 1 245360 107810 TAGTLFGEGFR LKASEHRQTVLESIRTAGTLFGEGFRAFVT ESIRTAGTLFGEGFRAFVTDRDKVTATVAG R T A F R A 1 1 0 0 0 0 1 3 0 0 1 0 0 2 0 0 2 0 0 0 0 0 11 0 1154.572 Q9NVI7;Q5T9A4 Q5T9A4 228 238 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 2.6252E-09 214.71 By MS/MS By MS/MS 4.5 2.24 1 1 1 3 1 1 7 1 54639000 54515000 124830 13117 2598;1638 13900 33485;33486;33487;33488;33489;33490;33491;33492 26752;26753;26754;26755;26756;26757;26758;26759;26760 26756 9 622160 104830 TAHETDKSEGGKR LDCPDLIAEFLQSQKTAHETDKSEGGKRKA QKTAHETDKSEGGKRKADSDSEDKGEESKP K T A K R K 1 1 0 1 0 0 2 2 1 0 0 2 0 0 0 1 2 0 0 0 0 0 13 2 1414.6801 P83916 P83916 73 85 CBX1 Chromobox protein homolog 1 yes yes 2;3 0.0027065 159.09 By MS/MS 9 0 2 2 133310 133310 0 13118 1243 13901 33493;33494 26761;26762 26762 2 2623.5 0 TAHSLFK RFQSGDFHVINGVLRTAHSLFKRYRHEFKS HVINGVLRTAHSLFKRYRHEFKSNELWTEI R T A F K R 1 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 0 0 0 7 0 802.43374 P55060 P55060 152 158 CSE1L Exportin-2 yes yes 2 0.044235 94.006 By MS/MS 4 0 1 1 479150 479150 0 13119 1053 13902 33495 26763 26763 1 45091 0 TAICNLILGNPPSK KVHILGSFQNIKMARTAICNLILGNPPSKV RTAICNLILGNPPSKVYGNIRAVASRSADR R T A S K V 1 0 2 0 1 0 0 1 0 2 2 1 0 0 2 1 1 0 0 0 0 0 14 0 1496.8021 Q9NRX1 Q9NRX1 223 236 PNO1 RNA-binding protein PNO1 yes yes 2 2.0822E-16 248.36 By MS/MS 8 0 1 1 873950 873950 0 13120 2560 13903 33496 26764 26764 1 11033 0 TAIEEVQAER LDTPLYFSYSHLVCRTAIEEVQAERKDDSH HLVCRTAIEEVQAERKDDSHPVHVDNCILN R T A E R K 2 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1144.5724 Q32P28 Q32P28 570 579 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 2 0.0092084 96.113 By MS/MS 4.5 0.5 1 1 2 792330 792330 0 13121 1573 13904 33497;33498 26765 26765 1 49722 0 TAIHEVMEQGR VVCIDEFDKMSDMDRTAIHEVMEQGRVTIA DMDRTAIHEVMEQGRVTIAKAGIHARLNAR R T A G R V 1 1 0 0 0 1 2 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 11 0 1269.6136 P25205 P25205 420 430 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0072241 98.04 By MS/MS 4 0 1 1 410050 410050 0 13122 719 13905 33499 26766 26766 1 38589 0 TAKAEAIVYK DEQGMAFSKSEGKRKTAKAEAIVYKHGSGR EGKRKTAKAEAIVYKHGSGRIKVNGIDYQL K T A Y K H 3 0 0 0 0 0 1 0 0 1 0 2 0 0 0 0 1 0 1 1 0 0 10 1 1092.6179 P82933 P82933 278 287 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.027258 104.42 By MS/MS 7 0 1 1 1535200 1535200 0 13123 1239 13906 33500 26767 26767 1 24101 0 TAKKSEEEIDFLR EFIYQFQSFSQYRCKTAKKSEEEIDFLRSN CKTAKKSEEEIDFLRSNPKIWNVHSVLNVL K T A L R S 1 1 0 1 0 0 3 0 0 1 1 2 0 1 0 1 1 0 0 0 0 0 13 2 1564.8097 Q9Y262 Q9Y262 204 216 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.001289 116.9 By MS/MS 5 0 1 1 1733300 1733300 0 13124 2814 13907 33501 26768 26768 1 17384 0 TALAATNPAVR GFSGLNVKAFISNVKTALAATNPAVRTAAI SNVKTALAATNPAVRTAAITLLGVMYLYVG K T A V R T 4 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 11 0 1083.6037 Q14008 Q14008 762 772 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00043379 132.88 By MS/MS 3 0.816 1 1 1 3 2483700 2483700 0 13125 1417 13908 33502;33503;33504 26769 26769 1 674270 0 TALAEAELEYNPEHVSR VYRSYKPVFWSPSSRTALAEAELEYNPEHV LAEAELEYNPEHVSRSIYVKFPLLKPSPKL R T A S R S 3 1 1 0 0 0 4 0 1 0 2 0 0 0 1 1 1 0 1 1 0 0 17 0 1927.9276 Q9NSE4 Q9NSE4 251 267 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00043271 154.13 By MS/MS 4 0 1 1 1848000 1848000 0 13126 2570 13909 33505 26770 26770 1 173910 0 TALALAIAQELGSK AGRAVLLAGPPGTGKTALALAIAQELGSKV KTALALAIAQELGSKVPFCPMVGSEVYSTE K T A S K V 4 0 0 0 0 1 1 1 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 0 1384.7926 Q9Y265 Q9Y265 77 90 RUVBL1 RuvB-like 1 yes yes 2;3 9.8164E-24 273.24 By MS/MS 6.33 0.471 2 1 3 4893500 4893500 0 13127 2815 13910 33506;33507;33508 26771;26772 26771 2 34550 0 TALAQIFR LAAKCILAGDPAVGKTALAQIFRSDGAHFQ GDPAVGKTALAQIFRSDGAHFQKSYTLTTG K T A F R S 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 918.5287 Q9BW83 Q9BW83 19 26 IFT27 Intraflagellar transport protein 27 homolog yes yes 2 0.0037639 132.08 By MS/MS 9.5 0.5 1 1 2 543590 543590 0 13128 2345 13911 33509;33510 26773;26774 26773 2 13935 0 TALASGGVLDASGDYR PPSPRSVDQVKAQLRTALASGGVLDASGDY ALASGGVLDASGDYRVYRGLLKTTMDPNDV R T A Y R V 3 1 0 2 0 0 0 3 0 0 2 0 0 0 0 2 1 0 1 1 0 0 16 0 1551.7529 O43505 O43505 65 80 B4GAT1 Beta-1,4-glucuronyltransferase 1 yes yes 2 2.7221E-07 218.06 By MS/MS 9.5 0.5 1 1 2 636950 636950 0 13129 216 13912 33511;33512 26775 26775 1 24414 0 TALFEEISR QGAVESIAMKNPKERTALFEEISRSGELAQ KNPKERTALFEEISRSGELAQEYDKRKKEM R T A S R S 1 1 0 0 0 0 2 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 9 0 1064.5502 Q14683 Q14683 152 160 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00021091 155.58 By MS/MS 3 1.41 1 1 1 1 1 5 3859400 3859400 0 13130 1451 13913 33513;33514;33515;33516;33517 26776;26777 26777 2 159240 0 TALGVAELTVTDLFR EDGSVGEGDLSCILKTALGVAELTVTDLFR TALGVAELTVTDLFRAIDQEEKGKITFADF K T A F R A 2 1 0 1 0 0 1 1 0 0 3 0 0 1 0 0 3 0 0 2 0 0 15 0 1604.8774 Q8NF37 Q8NF37 447 461 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 5.185E-07 207.95 By MS/MS 6 0 1 1 72663 72663 0 13131 1963 13914 33518 26778;26779 26779 2 499.5 0 TALIHDGLAR GGVMDVNTALQEVLKTALIHDGLARGIREA QEVLKTALIHDGLARGIREAAKALDKRQAH K T A A R G 2 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1065.5931 P25398 P25398 24 33 RPS12 40S ribosomal protein S12 yes yes 2;3 0.0056985 104.01 By MS/MS By matching 10 0 4 2 2 26394000 26118000 275540 13132 721 13915 33519;33520;33521;33522 26780;26781 26780 2 1407700 352770 TALINFLVQD LLQGRSIKKSFLSPRTALINFLVQD_____ FLSPRTALINFLVQD_______________ R T A Q D - 1 0 1 1 0 1 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1132.6128 Q15031 Q15031 894 903 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0013782 116.3 By MS/MS 4.5 0.5 1 1 2 461780 461780 0 13133 1477 13916 33523;33524 26782;26783 26782 2 43456 0 TALLDISCVK SYLITSVELLESKLKTALLDISCVKHIIYV ESKLKTALLDISCVKHIIYVDNKAINKAEY K T A V K H 1 0 0 1 1 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1118.6005 O60488 O60488 214 223 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 0.0027028 110.76 By MS/MS 5 0 1 1 1176800 1176800 0 13134 257 13917 33525 26784 26784 1 11803 0 TALNLFFK THSNLQPVHMILVLRTALNLFFKLKNFKTA HMILVLRTALNLFFKLKNFKTAATFARRLL R T A F K L 1 0 1 0 0 0 0 0 0 0 2 1 0 2 0 0 1 0 0 0 0 0 8 0 952.5382 P53621 P53621 1107 1114 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0076078 113.41 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 1506800 1506800 0 13135 1034 13918 33526;33527;33528;33529;33530;33531;33532;33533 26785;26786;26787;26788;26789;26790 26788 6 79429 0 TALSAVDMTQR VHPGASMVINEDGSRTALSAVDMTQREAVA DGSRTALSAVDMTQREAVAKQLLTPATGAP R T A Q R E 2 1 0 1 0 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 0 0 11 0 1191.5918 O95602 O95602 505 515 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.020544 82.261 By MS/MS 2 0 1 1 0 0 0 13136 418 13919 33534 26791 26791 160 1 0 0 TALTTTISSR GIITELGVFAPEELRTALTTTISSRDGTLD PEELRTALTTTISSRDGTLDGPQM______ R T A S R D 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 4 0 0 0 0 0 10 0 1049.5717 Q9BV20 Q9BV20 351 360 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.029435 82.261 By MS/MS 7 0 1 1 410850 410850 0 13137 2328 13920 33535 26792 26792 1 6449.7 0 TALVANTSNMPVAAR LTMEVDGKVESIMKRTALVANTSNMPVAAR TALVANTSNMPVAAREASIYTGITLSEYFR R T A A R E 4 1 2 0 0 0 0 0 0 0 1 0 1 0 1 1 2 0 0 2 0 0 15 0 1514.7875 P38606 P38606 309 323 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 1.1925E-32 293.71 By MS/MS 5 0 1 1 1252600 1252600 0 13138 849 13921 33536 26793 26793 431 1 12562 0 TALYNYIFAK FAPSPTGFLHLGGLRTALYNYIFAKKYQGS LGGLRTALYNYIFAKKYQGSFILRLEDTDQ R T A A K K 2 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 2 0 0 0 10 0 1202.6336 Q5JPH6 Q5JPH6 56 65 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.00020511 146.79 By MS/MS 7.5 1.5 1 1 2 1439500 1439500 0 13139 1605 13922 33537;33538 26794;26795 26794 2 10800 0 TALYVTPLDR ERFVVTAPPARNRSKTALYVTPLDRVTEFG RNRSKTALYVTPLDRVTEFGGELHEDGGKL K T A D R V 1 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 2 0 1 1 0 0 10 0 1147.6237 Q9UFW8 Q9UFW8 17 26 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.0050842 105.4 By MS/MS 9 0 1 1 350370 350370 0 13140 2716 13923 33539 26796 26796 1 6895.4 0 TAMNVNEIFMAIAK YADDNSLLFMETSAKTAMNVNEIFMAIAKK KTAMNVNEIFMAIAKKLPKNEPQNATGAPG K T A A K K 3 0 2 0 0 0 1 0 0 2 0 1 2 1 0 0 1 0 0 1 0 0 14 0 1551.7789 P51148 P51148 167 180 RAB5C Ras-related protein Rab-5C yes yes 2 8.3251E-05 175.48 By MS/MS 8.5 0.5 1 1 2 165520 165520 0 13141 989 13924 33540;33541 26797 26797 548;549 1 2715.3 0 TANLNLETR SVKDDSILSVTVDGKTANLNLETRTVECEE VTVDGKTANLNLETRTVECEEGSEDDESLR K T A T R T 1 1 2 0 0 0 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1030.5407 Q9UKF6 Q9UKF6 643 651 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 2 0.023868 87.258 By MS/MS 5 0 1 1 1477000 1477000 0 13142 2759 13925 33542 26798 26798 1 14813 0 TAQAAAALR EGFRRARHVVGEIRRTAQAAAALRRGDYRA VGEIRRTAQAAAALRRGDYRAFGRLMVESH R T A L R R 5 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 871.48756 P51570 P51570 288 296 GALK1 Galactokinase yes yes 2 0.0020347 120.87 By MS/MS 6.5 0.5 1 1 2 1661600 1661600 0 13143 997 13926 33543;33544 26799 26799 1 20389 0 TAQCFLR KDGVWNLQNEVTKERTAQCFLRVDDESMQR QNEVTKERTAQCFLRVDDESMQRFHNRVRQ R T A L R V 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 7 0 894.43817 Q6P2Q9 Q6P2Q9 1225 1231 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.048731 90.777 By MS/MS 2.5 0.5 1 1 2 3180800 3180800 0 13144 1708 13927 33545;33546 26800 26800 1 910350 0 TAQGGLVANR ______________________________ ______________________________ M T A N R G 2 1 1 0 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 985.53049 Q5J8M3 Q5J8M3 2 11 EMC4 ER membrane protein complex subunit 4 yes yes 2 0.0054263 105.98 By MS/MS 9 0 1 1 4608700 4608700 0 13145 1604 13928 33547 26801 26801 1 90700 0 TAQGLSPVDQR VEYDCDNLQHSKKGKTAQGLSPVDQRKCER KKGKTAQGLSPVDQRKCERLLLYLYCHELS K T A Q R K 1 1 0 1 0 2 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 11 0 1170.5993 Q9UPN9 Q9UPN9 954 964 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.0059717 101.35 By MS/MS 3 0 1 1 566550 566550 0 13146 2800 13929 33548 26802 26802 1 10366 0 TAQGSLSLK HAIEESVVLIYDPIKTAQGSLSLKAYRLTP IYDPIKTAQGSLSLKAYRLTPKLMEVCKEK K T A L K A 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 903.50255 O15372 O15372 157 165 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.00036638 150.81 By MS/MS By matching 7.75 0.829 2 1 1 3 1 19768000 19702000 66238 13147 186 13930 33549;33550;33551;33552 26803 26803 1 305760 119290 TAQSGALRDVSEELSR GSSQAPRKPEGAQARTAQSGALRDVSEELS AQSGALRDVSEELSRQLEDILSTYCVDNNQ R T A S R Q 2 2 0 1 0 1 2 1 0 0 2 0 0 0 0 3 1 0 0 1 0 0 16 1 1717.8595 P40222 P40222 62 77 TXLNA Alpha-taxilin yes yes 3 0.00046998 125.5 By MS/MS 5 0 1 1 8958000 8958000 0 13148 857 13931 33553 26804 26804 1 89844 0 TASDMVSTSR QEVIETLLSLEKQTRTASDMVSTSRILVAV EKQTRTASDMVSTSRILVAVVKMCYEAKEW R T A S R I 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 3 2 0 0 1 0 0 10 0 1053.4761 O00232 O00232 56 65 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.035408 87.806 By MS/MS 6 0 1 1 1557700 1557700 0 13149 94 13932 33554 26805 26805 0 10708 0 TASDQATTAR VSVRFQEDIISIWNKTASDQATTARIRDTL SIWNKTASDQATTARIRDTLRRVLNLPPNT K T A A R I 3 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 10 0 1020.4836 O60573 O60573 186 195 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 2 0.0014095 115.7 By MS/MS 8 0 1 1 353820 353820 0 13150 265 13933 33555 26806 26806 1 4466.9 0 TASEPSAQLSYASTGR LQMLLTEYLDMKNTRTASEPSAQLSYASTG ASEPSAQLSYASTGREFAAFFAKKKPQRPK R T A G R E 3 1 0 0 0 1 1 1 0 0 1 0 0 0 1 4 2 0 1 0 0 0 16 0 1624.7693 Q96A65 Q96A65 408 423 EXOC4 Exocyst complex component 4 yes yes 2 0.00030476 172.58 By MS/MS 4 0 1 1 851550 851550 0 13151 2104 13934 33556 26807 26807 1 80136 0 TASFSESR LLNASGSTSTPAPSRTASFSESRADEVAPA STPAPSRTASFSESRADEVAPAKKAKPAMP R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.0057163 122.18 By MS/MS 4 0.816 1 1 1 3 5235500 5235500 0 13152 1030 13935 33557;33558;33559 26808 26808 1 448710 0 TASFSESRADEVAPAK LLNASGSTSTPAPSRTASFSESRADEVAPA ASFSESRADEVAPAKKAKPAMPQDSVPSPR R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 2 0.024528 91.743 By MS/MS 4 0 1 1 259750 259750 0 13153 1030 13936 33560 26809 26809 1 24444 0 TASFSESRADEVAPAKK LLNASGSTSTPAPSRTASFSESRADEVAPA SFSESRADEVAPAKKAKPAMPQDSVPSPRS R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0020797 108.66 By MS/MS 4 0.816 1 1 1 3 5257800 5257800 0 13154 1030 13937 33561;33562;33563 26810;26811 26810 2 442840 0 TASNIGGFNAAIK ASVGIMTLSPFDQMKTASNIGGFNAAIKNS MKTASNIGGFNAAIKNSPPAMSQYITVGSN K T A I K N 3 0 2 0 0 0 0 2 0 2 0 1 0 1 0 1 1 0 0 0 0 0 13 0 1262.6619 Q9H2M9 Q9H2M9 283 295 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 5.1903E-12 243.91 By MS/MS 3 0 1 1 736880 736880 0 13155 2431 13938 33564 26812 26812 1 13483 0 TASNVEEAFINTAK FAREHGLIFMETSAKTASNVEEAFINTAKE KTASNVEEAFINTAKEIYEKIQEGVFDINN K T A A K E 3 0 2 0 0 0 2 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 14 0 1493.7362 P61019 P61019 152 165 RAB2A Ras-related protein Rab-2A yes yes 2 8.6107E-44 383.46 By MS/MS 9 0 1 1 1663300 1663300 0 13156 1105 13939 33565 26813 26813 1 32735 0 TASQGQWGR NIPKAKSLDGVTNDRTASQGQWGRAWEVDW GVTNDRTASQGQWGRAWEVDWFSLASVIFL R T A G R A 1 1 0 0 0 2 0 2 0 0 0 0 0 0 0 1 1 1 0 0 0 0 9 0 989.46789 Q9UBM7 Q9UBM7 23 31 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.002505 114.89 By MS/MS 3.33 2.62 1 1 1 3 595040 595040 0 13157 2701 13940 33566;33567;33568 26814;26815;26816 26814 3 170710 0 TASSVIELTCTK VVVTYSKGYPCGGNKTASSVIELTCTKTVG GNKTASSVIELTCTKTVGRPAFKRFDIDSC K T A T K T 1 0 0 0 1 0 1 0 0 1 1 1 0 0 0 2 3 0 0 1 0 0 12 0 1308.6595 P11717 P11717 2087 2098 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00041465 136.49 By MS/MS 2 0.816 1 1 1 3 806410 806410 0 13158 583 13941 33569;33570;33571 26817;26818 26818 2 179960 0 TASTNNIAQAR ______________________________ MSSKTASTNNIAQARRTVQQLRLEASIERI K T A A R R 3 1 2 0 0 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 11 0 1145.5789 Q9UBI6 Q9UBI6 5 15 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 2 0.00088583 123.86 By MS/MS By matching 10 0 2 1 1 688110 623620 64486 13159 2699 13942 33572;33573 26819 26819 1 33611 82560 TASTSFTNIAYDLCAK DEEEDMVIIYNRVPKTASTSFTNIAYDLCA ASTSFTNIAYDLCAKNKYHVLHINTTKNNP K T A A K N 3 0 1 1 1 0 0 0 0 1 1 1 0 1 0 2 3 0 1 0 0 0 16 0 1761.8244 Q7LGA3 Q7LGA3 84 99 HS2ST1 Heparan sulfate 2-O-sulfotransferase 1 yes yes 2 8.7032E-08 223.36 By MS/MS 7 0 1 1 752940 752940 0 13160 1774 13943 33574 26820 26820 1 11820 0 TASVPLDAVR ELRANVEEERAARLRTASVPLDAVRAEWER AARLRTASVPLDAVRAEWERTCGPYHKQRL R T A V R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 10 0 1027.5662 Q96DV4 Q96DV4 127 136 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.032553 80.755 By MS/MS 7 0 1 1 8061000 8061000 0 13161 2138 13944 33575 26821 26821 1 126540 0 TATAVAHCK SKGPLQSVQVFGRKKTATAVAHCKRGNGLI VFGRKKTATAVAHCKRGNGLIKVNGRPLEM K T A C K R 3 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 9 0 957.4702 P62249 P62249 18 26 RPS16 40S ribosomal protein S16 yes yes 2 0.00061677 143.12 By MS/MS By MS/MS 9.75 0.433 1 3 3 1 38739000 38675000 64320 13162 1145 13945 33576;33577;33578;33579 26822;26823;26824;26825 26824 4 2047900 82348 TATAVAHCKR SKGPLQSVQVFGRKKTATAVAHCKRGNGLI FGRKKTATAVAHCKRGNGLIKVNGRPLEMI K T A K R G 3 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 10 1 1113.5713 P62249 P62249 18 27 RPS16 40S ribosomal protein S16 yes yes 2;3 4.2456E-05 146.79 By MS/MS 9.67 0.471 1 2 3 11368000 11368000 0 13163 1145 13946 33580;33581;33582 26826;26827 26827 2 609030 0 TATESFASDPILYRPVAVALDTK HGTHEYHAETIKNVRTATESFASDPILYRP DPILYRPVAVALDTKGPEIRTGLIKGSGTA R T A T K G 4 1 0 2 0 0 1 0 0 1 2 1 0 1 2 2 3 0 1 2 0 0 23 1 2464.285 P14618 P14618 93 115 PKM Pyruvate kinase PKM yes yes 3 4.5465E-05 105.2 By MS/MS 6 0 1 1 5703600 5703600 0 13164 614 13947 33583 26828 26828 1 39208 0 TATFENIVCVLNR AGSELLQRCESLEKKTATFENIVCVLNREV KKTATFENIVCVLNREVERVAMTAEACSRQ K T A N R E 1 1 2 0 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 2 0 0 13 0 1535.7766 Q12933 Q12933 279 291 TRAF2 TNF receptor-associated factor 2 yes yes 2 2.1434E-17 265.01 By MS/MS 6 0 1 1 764150 764150 0 13165 1341 13948 33584 26829 26829 1 5253 0 TATITEPR GNWVLIEGVDQPIVKTATITEPRGNEEAQI VDQPIVKTATITEPRGNEEAQIFRPLKFNT K T A P R G 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 3 0 0 0 0 0 8 0 887.47125 Q15029 Q15029 562 569 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.042822 85.212 By MS/MS 4.5 1.12 1 1 1 1 4 3149200 3149200 0 13166 1476 13949 33585;33586;33587;33588 26830 26830 1 136310 0 TATLRPYLSAVR ______________________________ ______________________________ M T A V R A 2 2 0 0 0 0 0 0 0 0 2 0 0 0 1 1 2 0 1 1 0 0 12 1 1346.767 P59998 P59998 2 13 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.006878 97.472 By MS/MS 9.5 0.5 1 1 2 1644900 1644900 0 13167 1088 13950 33589;33590 26831 26831 1 39750 0 TATQLAVNK VEEGLHPQIIIRAFRTATQLAVNKIKEIAV IIRAFRTATQLAVNKIKEIAVTVKKADKVE R T A N K I 2 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 9 0 944.5291 Q99832 Q99832 127 135 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0095404 101.25 By MS/MS 7 1.41 1 1 1 1 1 5 86804000 86804000 0 13168 2270 13951 33591;33592;33593;33594;33595 26832;26833 26832 2 668500 0 TATQLAVNKIK VEEGLHPQIIIRAFRTATQLAVNKIKEIAV RAFRTATQLAVNKIKEIAVTVKKADKVEQR R T A I K E 2 0 1 0 0 1 0 0 0 1 1 2 0 0 0 0 2 0 0 1 0 0 11 1 1185.7081 Q99832 Q99832 127 137 CCT7 T-complex protein 1 subunit eta yes yes 2 0.011345 111.06 By MS/MS 6 0 1 1 635450 635450 0 13169 2270 13952 33596 26834 26834 1 4368.2 0 TATSLPVVNFGSPLR GGEASLVEKVKRGQRTATSLPVVNFGSPLR TATSLPVVNFGSPLRRCEFSGGIPKRPSSP R T A L R R 1 1 1 0 0 0 0 1 0 0 2 0 0 1 2 2 2 0 0 2 0 0 15 0 1557.8515 Q96T17 Q96T17 262 276 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.0051158 103.14 By MS/MS 4 0 1 1 250270 250270 0 13170 2237 13953 33597 26835 26835 1 23552 0 TAVAPIER AKDFLAGGVAAAISKTAVAPIERVKLLLQV VAAAISKTAVAPIERVKLLLQVQHASKQIT K T A E R V 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 8 0 855.48142 P05141;Q9H0C2;P12235;P12236 P05141 24 31 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.044696 84.498 By MS/MS 1 0 1 1 39210000 39210000 0 13171 487;589;588 13954 33598 26836 26836 1 9448500 0 TAVAPIERVK AKDFLAGGVAAAISKTAVAPIERVKLLLQV AAISKTAVAPIERVKLLLQVQHASKQITAD K T A V K L 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 10 1 1082.6448 P05141;Q9H0C2;P12235;P12236 P05141 24 33 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3 0.024304 88.134 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 3347000 3199800 147190 13172 487;589;588 13955 33599;33600;33601;33602 26837;26838 26837 2 48476 198620 TAVCDIPPR KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA IPNNVKTAVCDIPPRGLKMSATFIGNSTAI K T A P R G 1 1 0 1 1 0 0 0 0 1 0 0 0 0 2 0 1 0 0 1 0 0 9 0 1027.5121 P04350;P68371;Q3ZCM7;A6NNZ2;P07437;Q13885;Q9BVA1 P68371 351 359 TUBB4A;TUBB4B;TUBB8;TUBB;TUBB2A;TUBB2B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 0.001905 122.52 By MS/MS By matching 7.3 1.27 4 2 1 3 9 1 76737000 76689000 48440 13173 1212;509;1412;2331;472 13956 33603;33604;33605;33606;33607;33608;33609;33610;33611;33612 26839;26840;26841;26842;26843;26844;26845;26846;26847;26848;26849;26850;26851;26852;26853;26854;26855 26850 17 589550 49637 TAVCDIPPRGLK KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA NVKTAVCDIPPRGLKMSATFIGNSTAIQEL K T A L K M 1 1 0 1 1 0 0 1 0 1 1 1 0 0 2 0 1 0 0 1 0 0 12 1 1325.7126 P04350;P68371;Q3ZCM7;A6NNZ2;P07437;Q13885;Q9BVA1 P68371 351 362 TUBB4A;TUBB4B;TUBB8;TUBB;TUBB2A;TUBB2B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2;3 0.026074 104.82 By MS/MS 6.33 0.471 4 2 6 26983000 26983000 0 13174 1212;509;1412;2331;472 13957 33613;33614;33615;33616;33617;33618 26856;26857;26858;26859 26858 4 193900 0 TAVDGPDLEMLTGQER YIPPHAALCLEVTLKTAVDGPDLEMLTGQE AVDGPDLEMLTGQERVALANRKRECGNAHY K T A E R V 1 1 0 2 0 1 2 2 0 0 2 0 1 0 1 0 2 0 0 1 0 0 16 0 1730.8145 Q14318 Q14318 202 217 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 5.5773E-18 270.21 By MS/MS 6.33 0.471 2 1 3 6601100 6601100 0 13175 1438 13958;13959 33619;33620;33621 26860;26861 26861 847 2 46527 0 TAVEFLSK LENLVLQAKIHMPEKTAVEFLSKAVDSPNI KIHMPEKTAVEFLSKAVDSPNIKAVDEAVI K T A S K A 1 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 8 0 893.48583 Q7L2E3 Q7L2E3 831 838 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.028679 90.601 By MS/MS 4.5 1.12 1 1 1 1 4 10509000 10509000 0 13176 1761 13960 33622;33623;33624;33625 26862 26862 1 178880 0 TAVETAVLLLR LGIWEPLAVKLQTYKTAVETAVLLLRIDDI QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ K T A L R I 2 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 11 0 1184.7129 P49368 P49368 508 518 CCT3 T-complex protein 1 subunit gamma yes yes 2 9.4265E-14 244.8 By MS/MS 6.6 1.8 1 2 3 1 1 1 1 10 110130000 110130000 0 13177 947 13961 33626;33627;33628;33629;33630;33631;33632;33633;33634;33635 26863;26864;26865;26866;26867;26868;26869;26870;26871;26872;26873;26874 26864 12 979040 0 TAVHAGNINFK ______________________________ ______________________________ M T A F K W 2 0 2 0 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 11 0 1170.6146 P35221 P35221 2 12 CTNNA1 Catenin alpha-1 yes yes 2 0.0073658 99.815 By MS/MS 4 0 1 1 960360 960360 0 13178 812 13962 33636 26875 26875 1 90376 0 TAVIKENEREK ITDAQLEAMTELHDRTAVIKENEREKRPKL LHDRTAVIKENEREKRPKLENLPDTEDQET R T A E K R 1 1 1 0 0 0 3 0 0 1 0 2 0 0 0 0 1 0 0 1 0 0 11 2 1315.7096 Q9H2G2 Q9H2G2 416 426 SLK STE20-like serine/threonine-protein kinase yes yes 3 0.0076092 93.561 By MS/MS 3 0.816 1 1 1 3 653380 653380 0 13179 2429 13963 33637;33638;33639 26876 26876 1 102990 0 TAVVTGANSGIGK VKAPPCGGMGNLRGRTAVVTGANSGIGKMT GRTAVVTGANSGIGKMTALELARRGARVVL R T A G K M 2 0 1 0 0 0 0 3 0 1 0 1 0 0 0 1 2 0 0 2 0 0 13 0 1173.6354 Q6UX07 Q6UX07 38 50 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.0012186 122.18 By MS/MS By matching 6.5 0.5 1 1 1 1 683040 663230 19810 13180 1733 13964 33640;33641 26877 26877 1 10411 20299 TAVVVGTITDDVR SRMIRKMKLPGRENKTAVVVGTITDDVRVQ NKTAVVVGTITDDVRVQEVPKLKVCALRVT K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 Q07020 Q07020 79 91 RPL18 60S ribosomal protein L18 yes yes 2 4.5889E-24 271.62 By MS/MS By MS/MS 8.8 0.748 2 2 1 3 2 16810000 16521000 288930 13181 1298 13965 33642;33643;33644;33645;33646 26878;26879;26880;26881 26879 4 287690 553430 TAWGQQPDLAANEAQLLR YAFNSGNVERFQTLKTAWGQQPDLAANEAQ GQQPDLAANEAQLLRKIQLLCLMEMTFTRP K T A L R K 4 1 1 1 0 3 1 1 0 0 3 0 0 0 1 0 1 1 0 0 0 0 18 0 1981.0017 Q9UNM6 Q9UNM6 253 270 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 1.7973E-07 139.66 By MS/MS 7 0 1 1 752460 752460 0 13182 2791 13966 33647 26882 26882 0 11812 0 TAWVFDDKYK LEYTKDEQLESLFQRTAWVFDDKYKRPGYG SLFQRTAWVFDDKYKRPGYGAYDAFKHAVS R T A Y K R 1 0 0 2 0 0 0 0 0 0 0 2 0 1 0 0 1 1 1 1 0 0 10 1 1271.6186 P05198 P05198 134 143 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2;3 0.00067718 148.69 By MS/MS 7.33 0.471 2 1 3 2153100 2153100 0 13183 489 13967 33648;33649;33650 26883;26884 26884 2 32474 0 TCDGVQCAFEELVEK FARKHSMLFIEASAKTCDGVQCAFEELVEK TCDGVQCAFEELVEKIIQTPGLWESENQNK K T C E K I 1 0 0 1 2 1 3 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 15 0 1783.7757 Q9NP72 Q9NP72 154 168 RAB18 Ras-related protein Rab-18 yes yes 2 0.00039101 139.78 By MS/MS 9 0 1 1 159070 159070 0 13184 2524 13968 33651 26885 26885 1 3130.4 0 TCDISFSDPDDLLNFK QLRIQKDINELNLPKTCDISFSDPDDLLNF CDISFSDPDDLLNFKLVICPDEGFYKSGKF K T C F K L 0 0 1 4 1 0 0 0 0 1 2 1 0 2 1 2 1 0 0 0 0 0 16 0 1885.8404 P61081 P61081 46 61 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 4.2711E-07 213.63 By MS/MS 9 0 1 1 80709 80709 0 13185 1108 13969 33652 26886 26886 1 1588.4 0 TCDLEEFQTCLVR ISSPAVERLISSLLRTCDLEEFQTCLVRHC LRTCDLEEFQTCLVRHCKHAFGCALVHTSG R T C V R H 0 1 0 1 2 1 2 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 13 0 1669.744 Q9BQ52 Q9BQ52 631 643 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.00034895 147.26 By MS/MS 4 0 1 1 1411000 1411000 0 13186 2283 13970 33653 26887 26887 1 132790 0 TCEESSFCKR VCLGITLAVDRSNFKTCEESSFCKRQRSIR RSNFKTCEESSFCKRQRSIRPGLSPYRALL K T C K R Q 0 1 0 0 2 0 2 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 10 1 1302.5333 Q14697 Q14697 40 49 GANAB Neutral alpha-glucosidase AB yes yes 2;3 0.010716 107.69 By MS/MS 4 0 2 2 2535200 2535200 0 13187 1454 13971 33654;33655 26888;26889 26889 2 238580 0 TCEKVEER PFAISLIESVRTYERTCEKVEERNTISLLV SVRTYERTCEKVEERNTISLLVAGLKKEVQ R T C E R N 0 1 0 0 1 0 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 8 1 1049.4812 Q14204 Q14204 791 798 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0013059 167.23 By MS/MS 2 0 1 1 462970 462970 0 13188 1433 13972 33656 26890 26890 1 156590 0 TCFIILSK VIQGAVEYPDPIAQKTCFIILSKLVELWGG PDPIAQKTCFIILSKLVELWGGKDGPVGFA K T C S K L 0 0 0 0 1 0 0 0 0 2 1 1 0 1 0 1 1 0 0 0 0 0 8 0 980.53649 O43592 O43592 844 851 XPOT Exportin-T yes yes 2 0.0085009 112.41 By MS/MS 4.5 0.5 1 1 2 866550 866550 0 13189 220 13973 33657;33658 26891 26891 1 74366 0 TCFSPNR AYYDTERIGVDLIMKTCFSPNRVIGLSSDL IGVDLIMKTCFSPNRVIGLSSDLQQVGGAS K T C N R V 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 7 0 880.38614 O00303 O00303 255 261 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.0071094 146.94 By MS/MS By matching 7.71 1.39 2 1 2 1 1 6 1 34237000 34149000 87818 13190 99 13974 33659;33660;33661;33662;33663;33664;33665 26892;26893;26894 26892 3 349280 89988 TCGFDFTGAVEDISK DAGMQLQGYRYYDPKTCGFDFTGAVEDISK TCGFDFTGAVEDISKIPEQSVLLLHACAHN K T C S K I 1 0 0 2 1 0 1 2 0 1 0 1 0 2 0 1 2 0 0 1 0 0 15 0 1645.7294 P00505 P00505 186 200 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 4.6397E-08 224.25 By MS/MS 7 0 1 1 335890 335890 0 13191 446 13975 33666 26895 26895 1 5272.9 0 TCHSFIINEK HVVAASKAMKMGDWKTCHSFIINEKMNGKV MGDWKTCHSFIINEKMNGKVWDLFPEADKV K T C E K M 0 0 1 0 1 0 1 0 1 2 0 1 0 1 0 1 1 0 0 0 0 0 10 0 1247.5969 Q99613;B5ME19 Q99613 751 760 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 2.6671E-11 223.32 By MS/MS 4.54 1.99 1 1 2 3 2 1 2 1 13 60666000 60666000 0 13192 2252 13976 33667;33668;33669;33670;33671;33672;33673;33674;33675;33676;33677;33678;33679 26896;26897;26898;26899;26900;26901;26902;26903;26904;26905 26901 10 5034000 0 TCIQEFTAHR GSHDCSIRLWNLESKTCIQEFTAHRKKFEE NLESKTCIQEFTAHRKKFEESIHDVAFHPS K T C H R K 1 1 0 0 1 1 1 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 10 0 1261.5874 O43815 O43815 739 748 STRN Striatin yes yes 2;3 0.0097079 94.363 By MS/MS 4 0 2 2 1359600 1359600 0 13193 237 13977 33680;33681 26906;26907 26906 2 127940 0 TCLICADTFR TCSKLAYYYQRKGWKTCLICADTFRAGAFD RKGWKTCLICADTFRAGAFDQLKQNATKAR K T C F R A 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 10 0 1255.5689 P61011 P61011 132 141 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.0012069 119.62 By MS/MS 8 1.41 1 1 1 1 1 5 7700600 7700600 0 13194 1104 13978 33682;33683;33684;33685;33686 26908 26908 1 67050 0 TCLLIVFSK IRKKLVIVGDGACGKTCLLIVFSKDQFPEV DGACGKTCLLIVFSKDQFPEVYVPTVFENY K T C S K D 0 0 0 0 1 0 0 0 0 1 2 1 0 1 0 1 1 0 0 1 0 0 9 0 1079.6049 P61586;P08134;P62745 P61586 19 27 RHOA;RHOC;RHOB Transforming protein RhoA;Rho-related GTP-binding protein RhoC;Rho-related GTP-binding protein RhoB no no 2 0.0027503 113.18 By MS/MS 9 0 1 1 276060 276060 0 13195 1125;518;1167 13979 33687 26909;26910 26910 2 5432.9 0 TCLLNETGDEPFQYKN SANCDPFSVTEALIRTCLLNETGDEPFQYK CLLNETGDEPFQYKN_______________ R T C K N - 0 0 2 1 1 1 2 1 0 0 2 1 0 1 1 0 2 0 1 0 0 0 16 1 1927.8622 P15104 P15104 358 373 GLUL Glutamine synthetase yes yes 2 2.2367E-32 297.18 By MS/MS 7 0 1 1 1357100 1357100 0 13196 622 13980 33688 26911 26911 1 21304 0 TCNCTLDIFK VILNGEKFTLEIWDKTCNCTLDIFKTTIPH EIWDKTCNCTLDIFKTTIPHALLTWRPNSG K T C F K T 0 0 1 1 2 0 0 0 0 1 1 1 0 1 0 0 2 0 0 0 0 0 10 0 1270.5686 Q9Y6D6 Q9Y6D6 1523 1532 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.0001459 150.81 By MS/MS 2 0 1 1 86149 86149 0 13197 2941 13981 33689 26912 26912 1 29139 0 TCPVQLWVDSTPPPGTR TYSPALNKMFCQLAKTCPVQLWVDSTPPPG PVQLWVDSTPPPGTRVRAMAIYKQSQHMTE K T C T R V 0 1 0 1 1 1 0 1 0 0 1 0 0 0 4 1 3 1 0 2 0 0 17 0 1909.9356 P04637 P04637 140 156 TP53 Cellular tumor antigen p53 yes yes 2 4.4437E-11 276.32 By MS/MS 6 0 1 1 2144700 2144700 0 13198 476 13982 33690 26913 26913 1 14743 0 TCSEAIQQLR TERDQIDQDAQIFMRTCSEAIQQLRTEAHK QIFMRTCSEAIQQLRTEAHKEIHSQQVKEH R T C L R T 1 1 0 0 1 2 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1204.587 Q9P2W9 Q9P2W9 106 115 STX18 Syntaxin-18 yes yes 2 1.3009E-10 213.53 By MS/MS 7 0 1 1 5809100 5809100 0 13199 2691 13983 33691 26914 26914 1 91193 0 TCTFILR GGERYNFFTGCPKAKTCTFILRGGAEQFME FTGCPKAKTCTFILRGGAEQFMEETERSLH K T C L R G 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 7 0 909.47422 Q99832 Q99832 369 375 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0055896 153.15 By MS/MS 4.2 2.93 1 1 1 1 1 5 71719000 71719000 0 13200 2270 13984 33692;33693;33694;33695;33696 26915;26916;26917;26918 26917 4 600580 0 TCTTVAFTQVNSEDK IIKGKARLGRLVHRKTCTTVAFTQVNSEDK TCTTVAFTQVNSEDKGALAKLVEAIRTNYN K T C D K G 1 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 4 0 0 2 0 0 15 0 1699.7723 P62424 P62424 198 212 RPL7A 60S ribosomal protein L7a yes yes 2 5.5348E-07 206.74 By MS/MS 8 0 1 1 1608200 1608200 0 13201 1160 13985 33697 26919 26919 1 20303 0 TCTTVAFTQVNSEDKGALAK IIKGKARLGRLVHRKTCTTVAFTQVNSEDK AFTQVNSEDKGALAKLVEAIRTNYNDRYDE K T C A K L 3 0 1 1 1 1 1 1 0 0 1 2 0 1 0 1 4 0 0 2 0 0 20 1 2140.047 P62424 P62424 198 217 RPL7A 60S ribosomal protein L7a yes yes 2;3 1.294E-08 218.2 By MS/MS 8 0 2 2 6346400 6346400 0 13202 1160 13986 33698;33699 26920;26921 26921 2 80122 0 TCVQEITAHR GSHDCSIRLWNLDSKTCVQEITAHRKKLDE NLDSKTCVQEITAHRKKLDESIYDVAFHSS K T C H R K 1 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 10 0 1213.5874 Q13033;Q9NRL3 Q13033 756 765 STRN3;STRN4 Striatin-3;Striatin-4 no no 3 0.003692 107.11 By MS/MS 4 0 1 1 842780 842780 0 13203 1346;2555 13987 33700 26922 26922 1 79311 0 TCVVGFAGLR VSVELAKVLLHLEEKTCVVGFAGLRQRALV HLEEKTCVVGFAGLRQRALVAVTVTDPAPV K T C L R Q 1 1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 2 0 0 10 0 1078.5593 Q9Y4R8 Q9Y4R8 567 576 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0012521 118.74 By MS/MS 4 0 1 1 1016900 1016900 0 13204 2900 13988 33701 26923;26924 26923 2 95695 0 TCWPTDLEEAK RMSFCVYSILGVVKRTCWPTDLEEAKAGGF VVKRTCWPTDLEEAKAGGFVVGYTSSGNPI R T C A K A 1 0 0 1 1 0 2 0 0 0 1 1 0 0 1 0 2 1 0 0 0 0 11 0 1348.5969 Q9HAV4 Q9HAV4 735 745 XPO5 Exportin-5 yes yes 2 0.0057351 101.97 By MS/MS 3 0 1 1 237020 237020 0 13205 2495 13989 33702 26925 26925 1 4336.9 0 TCYNIYLASK QHIEIHEGTVLQAVRTCYNIYLASKNLINQ LQAVRTCYNIYLASKNLINQTTAKATLTQM R T C S K N 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 1 0 2 0 0 0 10 0 1231.5907 Q9Y6D6;Q9Y6D5 Q9Y6D6 177 186 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.0035261 108.9 By MS/MS 2 0 1 1 526420 526420 0 13206 2941;2940 13990 33703 26926 26926 1 178060 0 TDAAVSFAK ______________________________ ______________________________ M T D A K D 3 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 9 0 908.46035 P05141 P05141 2 10 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.00026401 149.57 By MS/MS By MS/MS 6.22 3.12 1 1 1 1 3 1 1 8 1 136080000 134720000 1354700 13207 487 13991 33704;33705;33706;33707;33708;33709;33710;33711;33712 26927;26928;26929;26930;26931;26932 26930 6 5954500 1828000 TDAAVSFAKDFLAGGVAAAISK ______________________________ AKDFLAGGVAAAISKTAVAPIERVKLLLQV M T D S K T 7 0 0 2 0 0 0 2 0 1 1 2 0 2 0 2 1 0 0 2 0 0 22 1 2109.1106 P05141 P05141 2 23 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.0001704 92.492 By MS/MS 8.5 0.5 1 1 2 114190 114190 0 13208 487 13992 33713;33714 26933 26933 1 1923.2 0 TDACFIR PGTGKTLCARAVANRTDACFIRVIGSELVQ CARAVANRTDACFIRVIGSELVQKYVGEGA R T D I R V 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 7 0 881.40654 P35998 P35998 233 239 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.035286 100.74 By MS/MS 7 0.816 1 1 1 3 6165300 6165300 0 13209 831 13993 33715;33716;33717 26934;26935;26936 26936 3 73326 0 TDAEATDTEATET LRRKRAREVLLASQKTDAEATDTEATET__ QKTDAEATDTEATET_______________ K T D E T - 3 0 0 2 0 0 3 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 13 0 1353.542 Q9Y3D3 Q9Y3D3 125 137 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 8.2938E-56 339.04 By MS/MS 10 0 1 1 2977300 2977300 0 13210 2871 13994 33718 26937 26937 1 160460 0 TDAGFTLR KETVREAEAASIKIRTDAGFTLRWVRKTPW AASIKIRTDAGFTLRWVRKTPWYQ______ R T D L R W 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 0 0 0 8 0 879.44503 P18206 P18206 1118 1125 VCL Vinculin yes yes 2 0.0045756 127.46 By MS/MS 3 0 1 1 808070 808070 0 13211 653 13995 33719 26938 26938 1 14785 0 TDAISEEK ISNVPILILGNKIDRTDAISEEKLREIFGL LGNKIDRTDAISEEKLREIFGLYGQTTGKG R T D E K L 1 0 0 1 0 0 2 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 8 0 891.41854 Q9NR31 Q9NR31 139 146 SAR1A GTP-binding protein SAR1a yes yes 2 0.016312 103.74 By MS/MS 9 0 1 1 1139500 1139500 0 13212 2546 13996 33720 26939 26939 1 22426 0 TDAISEEKLR ISNVPILILGNKIDRTDAISEEKLREIFGL NKIDRTDAISEEKLREIFGLYGQTTGKGNV R T D L R E 1 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1160.6037 Q9NR31 Q9NR31 139 148 SAR1A GTP-binding protein SAR1a yes yes 2;3 0.033315 101.66 By MS/MS 9 0 2 2 1159500 1159500 0 13213 2546 13997 33721;33722 26940;26941 26940 2 22819 0 TDALPGVLR LFAAPPEKDILWDVKTDALPGVLRWQQRLW ILWDVKTDALPGVLRWQQRLWTLTTRFIEA K T D L R W 1 1 0 1 0 0 0 1 0 0 2 0 0 0 1 0 1 0 0 1 0 0 9 0 940.53418 Q15031 Q15031 682 690 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.035371 82.279 By MS/MS 4.5 0.5 1 1 2 2763400 2763400 0 13214 1477 13998 33723;33724 26942 26942 1 217620 0 TDASSASSFLDSDELER ELAGRPMKVGHVTERTDASSASSFLDSDEL ASSASSFLDSDELERTGIDLGTTGRLQLMA R T D E R T 2 1 0 3 0 0 2 0 0 0 2 0 0 1 0 5 1 0 0 0 0 0 17 0 1828.7963 Q14498 Q14498 330 346 RBM39 RNA-binding protein 39 yes yes 2 2.7985E-24 281.32 By MS/MS 5.5 0.5 1 1 2 2559000 2559000 0 13215 1441 13999 33725;33726 26943 26943 1 22341 0 TDAVDSVVR YAFAFIQVPQDDDARTDAVDSVVRDIQNTQ QDDDARTDAVDSVVRDIQNTQCLLNVEHLS R T D V R D 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 3 0 0 9 0 960.48762 Q7KZF4 Q7KZF4 811 819 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.002414 116.05 By MS/MS 4 0 1 1 741290 741290 0 13216 1755 14000 33727 26944 26944 1 69761 0 TDDLITR FSAFVGQMHQQGILKTDDLITRFFRLCTEM MHQQGILKTDDLITRFFRLCTEMCVEISYR K T D T R F 0 1 0 2 0 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 7 0 832.42905 A5YKK6 A5YKK6 1891 1897 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.052962 89.296 By MS/MS By matching 2.33 1.25 1 1 1 2 1 1249300 1181100 68172 13217 19 14001 33728;33729;33730 26945 26945 1 204620 68172 TDEGIAYR ADVTRRLSEDYGVLKTDEGIAYRGLFIIDG EDYGVLKTDEGIAYRGLFIIDGKGVLRQIT K T D Y R G 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 8 0 923.43486 P32119 P32119 120 127 PRDX2 Peroxiredoxin-2 yes yes 2 1.8407E-06 194.25 By MS/MS By MS/MS 6 3 1 1 1 1 1331800 1260000 71806 13218 796 14002 33731;33732 26946;26947 26947 2 24796 9139.8 TDEQALLSSILAK LNGAEPNYHSLPSARTDEQALLSSILAKTA ARTDEQALLSSILAKTASNIIDVSAADSQG R T D A K T 2 0 0 1 0 1 1 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1387.7559 Q6IAA8 Q6IAA8 48 60 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 2 1.2113E-07 210.44 By MS/MS 9.5 0.5 1 1 2 1130400 1130400 0 13219 1680 14003 33733;33734 26948;26949 26949 2 48095 0 TDFEEFFLR IKIAALRMYTSCVEKTDFEEFFLRCQMPDT TSCVEKTDFEEFFLRCQMPDTFNSWFLITL K T D L R C 0 1 0 1 0 0 2 0 0 0 1 0 0 3 0 0 1 0 0 0 0 0 9 0 1202.5608 Q9NVA1 Q9NVA1 128 136 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 2 0.0020347 120.87 By MS/MS 8.5 0.5 1 1 2 210860 210860 0 13220 2591 14004 33735;33736 26950;26951;26952 26950 3 3729.9 0 TDFKEEPEPGFKR GFHQVPFAPIVFIERTDFKEEPEPGFKRLA ERTDFKEEPEPGFKRLAWGQPVGLRHTGYV R T D K R L 0 1 0 1 0 0 3 1 0 0 0 2 0 2 2 0 1 0 0 0 0 0 13 2 1578.7678 P47897 P47897 617 629 QARS Glutamine--tRNA ligase yes yes 3;4 0.0017307 112.44 By MS/MS 4.5 0.5 2 2 4 7638300 7638300 0 13221 928 14005 33737;33738;33739;33740 26953;26954 26953 2 601300 0 TDGKVFQFLNAK SGYKIYPGHGRRYARTDGKVFQFLNAKCES YARTDGKVFQFLNAKCESAFLSKRNPRQIN R T D A K C 1 0 1 1 0 1 0 1 0 0 1 2 0 2 0 0 1 0 0 1 0 0 12 1 1366.7245 P83731 P83731 24 35 RPL24 60S ribosomal protein L24 yes yes 2;3 0.00039946 147.3 By MS/MS 9 0 2 2 2071500 2071500 0 13222 1241 14006 33741;33742 26955;26956 26955 2 40768 0 TDIARTEYLSNADER TTWSHHLQQANIQFRTDIARTEYLSNADER TDIARTEYLSNADERLRWQASSLPADDLCT R T D E R L 2 2 1 2 0 0 2 0 0 1 1 0 0 0 0 1 2 0 1 0 0 0 15 1 1752.8279 Q14204 Q14204 3545 3559 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0013161 111.81 By MS/MS 1 0 1 1 221750 221750 0 13223 1433 14007 33743 26957 26957 1 53434 0 TDITYPAGFMDVISIDK KICMQRFIKIDGKVRTDITYPAGFMDVISI ITYPAGFMDVISIDKTGENFRLIYDTKGRF R T D D K T 1 0 0 3 0 0 0 1 0 3 0 1 1 1 1 1 2 0 1 1 0 0 17 0 1884.9179 P62701 P62701 78 94 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.0036069 104.59 By MS/MS 8 0 2 2 201170 201170 0 13224 1165 14008;14009 33744;33745 26958;26959;26960 26958 665 2 2539.8 0 TDKLVNER QAESDIMKRQPRNPKTDKLVNERLISMAYG RQPRNPKTDKLVNERLISMAYGQIGMIQAL K T D E R L 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 1 973.51926 P05023;P13637 P05023 841 848 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 yes no 3 0.040209 88.177 By MS/MS 2.5 1.12 1 1 1 1 4 3344600 3344600 0 13225 481 14010 33746;33747;33748;33749 26961;26962 26962 2 480820 0 TDKSSASAPDVDDPEAFPALA RGGRGRGGRPNRGSRTDKSSASAPDVDDPE SAPDVDDPEAFPALA_______________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 4.2057E-05 155.14 By MS/MS 8 1.41 1 1 1 1 1 5 13318000 13318000 0 13226 1946 14011 33750;33751;33752;33753;33754 26963;26964 26964 2 106380 0 TDLAAVPASR ITNGPDADVLIVYAKTDLAAVPASRGITAF IVYAKTDLAAVPASRGITAFIVEKGMPGFS K T D S R G 3 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 999.53491 P26440 P26440 214 223 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.015313 89.08 By MS/MS 7.5 0.5 1 1 2 1130300 1130300 0 13227 732 14012 33755;33756 26965;26966 26966 2 17109 0 TDLEKDIISDTSGDFRK QELQEINRVYKEMYKTDLEKDIISDTSGDF LEKDIISDTSGDFRKLMVALAKGRRAEDGS K T D R K L 0 1 0 4 0 0 1 1 0 2 1 2 0 1 0 2 2 0 0 0 0 0 17 2 1938.9535 P07355;A6NMY6 P07355 153 169 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 3 0.0013809 126.07 By MS/MS 3 0 1 1 162530 0 162530 13228 508 14013 33757 26967 26967 1 0 20688 TDLLLEPYNK HIFYYLLSGAGEHLKTDLLLEPYNKYRFLS GEHLKTDLLLEPYNKYRFLSNGHVTIPGQQ K T D N K Y 0 0 1 1 0 0 1 0 0 0 3 1 0 0 1 0 1 0 1 0 0 0 10 0 1204.634 P35579 P35579 290 299 MYH9 Myosin-9 yes yes 2 1.5726E-11 224.36 By MS/MS 2 0 1 1 940160 940160 0 13229 824 14014 33758 26968 26968 1 318000 0 TDLLLEPYNKYR HIFYYLLSGAGEHLKTDLLLEPYNKYRFLS HLKTDLLLEPYNKYRFLSNGHVTIPGQQDK K T D Y R F 0 1 1 1 0 0 1 0 0 0 3 1 0 0 1 0 1 0 2 0 0 0 12 1 1523.7984 P35579 P35579 290 301 MYH9 Myosin-9 yes yes 2 0.0088463 99.013 By MS/MS 2 0 1 1 135990 135990 0 13230 824 14015 33759 26969 26969 1 45997 0 TDLLQVLLK GNCMEVPNVASSLLKTDLLQVLLKLAGSDT ASSLLKTDLLQVLLKLAGSDTQKTAVQVNA K T D L K L 0 0 0 1 0 1 0 0 0 0 4 1 0 0 0 0 1 0 0 1 0 0 9 0 1041.6434 Q9H892 Q9H892 645 653 TTC12 Tetratricopeptide repeat protein 12 yes yes 2 0.0016116 126.24 By MS/MS 5 0 1 1 142600 142600 0 13231 2474 14016 33760 26970 26970 1 1430.2 0 TDLSYLCSR FYLALDNKMIVEMLRTDLSYLCSRWRMTGQ IVEMLRTDLSYLCSRWRMTGQPTITFPISH R T D S R W 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 2 1 0 1 0 0 0 9 0 1113.5125 P46020 P46020 545 553 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 0.0033587 112.11 By MS/MS 3 0 1 1 434440 434440 0 13232 907 14017 33761 26971 26971 1 7949.1 0 TDMDNQIVVSDYAQMDR KAKIGLIQFCLSAPKTDMDNQIVVSDYAQM MDNQIVVSDYAQMDRVLREERAYILNLVKQ K T D D R V 1 1 1 4 0 2 0 0 0 1 0 0 2 0 0 1 1 0 1 2 0 0 17 0 1999.8615 P50991 P50991 258 274 CCT4 T-complex protein 1 subunit delta yes yes 2 1.7439E-57 355.89 By MS/MS 6 0 3 3 14680000 14680000 0 13233 985 14018;14019 33762;33763;33764 26972;26973;26974;26975 26973 544;545 4 100910 0 TDNSEVFWNPTPDIK LEGHWDSEVFITDKKTDNSEVFWNPTPDIK TDNSEVFWNPTPDIKQWRLIRHTVKFEEQG K T D I K Q 0 0 2 2 0 0 1 0 0 1 0 1 0 1 2 1 2 1 0 1 0 0 15 0 1761.821 Q9BZF1 Q9BZF1 650 664 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 6.6962E-11 231.74 By MS/MS 4 0 1 1 472550 472550 0 13234 2377 14020 33765 26976 26976 1 44470 0 TDPLKFQIER ERRFLSPEFIPRRGRTDPLKFQIERKDMLE PRRGRTDPLKFQIERKDMLERRKVLHIPEF R T D E R K 0 1 0 1 0 1 1 0 0 1 1 1 0 1 1 0 1 0 0 0 0 0 10 1 1245.6717 P49406 P49406 87 96 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.041769 97.813 By MS/MS 8 0 1 1 2763800 2763800 0 13235 948 14021 33766 26977 26977 1 34893 0 TDPSILGGMIVR KSFLSQGQVLKLEAKTDPSILGGMIVRIGE EAKTDPSILGGMIVRIGEKYVDMSVKTKIQ K T D V R I 0 1 0 1 0 0 0 2 0 2 1 0 1 0 1 1 1 0 0 1 0 0 12 0 1257.6751 P48047 P48047 177 188 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 5.4861E-06 185.6 By MS/MS By MS/MS 8.67 0.471 2 4 5 1 25686000 25603000 82891 13236 932 14022;14023 33767;33768;33769;33770;33771;33772 26978;26979;26980;26981;26982;26983;26984;26985;26986 26981 490 9 481930 189020 TDPSTLTEEEVSK SEIQLARLKKLGINKTDPSTLTEEEVSKFA NKTDPSTLTEEEVSKFARLDIDPSTITWQR K T D S K F 0 0 0 1 0 0 3 0 0 0 1 1 0 0 1 2 3 0 0 1 0 0 13 0 1434.6726 Q6UB35 Q6UB35 548 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0071673 97.163 By MS/MS 4.5 0.5 1 1 2 3582800 3582800 0 13237 1728 14024 33773;33774 26987 26987 1 306590 0 TDPTTLTDEEINR SDIQIRRLKRLGIEKTDPTTLTDEEINRFA EKTDPTTLTDEEINRFARLDIDPETITWQR K T D N R F 0 1 1 2 0 0 2 0 0 1 1 0 0 0 1 0 4 0 0 0 0 0 13 0 1503.7053 P11586 P11586 505 517 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.2666E-17 267.39 By MS/MS 4 0 1 1 6167000 6167000 0 13238 582 14025 33775 26988 26988 1 580360 0 TDQDEEHCR KAGSKRLFFWMQEPKTDQDEEHCRKVNEYL WMQEPKTDQDEEHCRKVNEYLNNPPMPGAL K T D C R K 0 1 0 2 1 1 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 9 0 1188.4466 Q16186 Q16186 114 122 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 4.2678E-05 155.42 By MS/MS 7 0 1 1 473350 473350 0 13239 1543 14026 33776 26989 26989 1 7430.8 0 TDQLVSFLR ASFFSKVMGILINRKTDQLVSFLRKKDDFV ILINRKTDQLVSFLRKKDDFVDLLLQHIGT K T D L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 9 0 1077.5819 Q9UPN7 Q9UPN7 136 144 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 0.001228 131.12 By MS/MS 3.5 0.5 1 1 2 328790 328790 0 13240 2799 14027 33777;33778 26990 26990 1 28605 0 TDSDIISK GFPFYGKPMRIQYAKTDSDIISKMRGTFAD MRIQYAKTDSDIISKMRGTFADKEKKKEKK K T D S K M 0 0 0 2 0 0 0 0 0 2 0 1 0 0 0 2 1 0 0 0 0 0 8 0 877.43928 P08579 P08579 86 93 SNRPB2 U2 small nuclear ribonucleoprotein B yes yes 2 0.029286 90.37 By MS/MS 8 0 1 1 417680 417680 0 13241 526 14028 33779 26991 26991 1 5273.2 0 TDSPSCEYSR RASMTNLVKMGFPSKTDSPSCEYSRFDFDS GFPSKTDSPSCEYSRFDFDSDEDFNAFFNS K T D S R F 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 3 1 0 1 0 0 0 10 0 1200.4717 Q9HAV4 Q9HAV4 414 423 XPO5 Exportin-5 yes yes 2 0.0003484 137.05 By MS/MS 3 0 1 1 285290 285290 0 13242 2495 14029 33780 26992 26992 1 5220.1 0 TDSQDLVASFR YIYTGNAKGKILVLKTDSQDLVASFRVTTG LVLKTDSQDLVASFRVTTGTSNTTAIKSIE K T D F R V 1 1 0 2 0 1 0 0 0 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1237.5939 Q15291 Q15291 180 190 RBBP5 Retinoblastoma-binding protein 5 yes yes 2 0.009 102.05 By MS/MS 5 0 1 1 744600 744600 0 13243 1497 14030 33781 26993 26993 1 7468 0 TDSQLQGQVLFR LWTNMAISSVAEFRRTDSQLQGQVLFRHLA FRRTDSQLQGQVLFRHLAGLAELLPESRRQ R T D F R H 0 1 0 1 0 3 0 1 0 0 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1390.7205 Q9NU22 Q9NU22 3130 3141 MDN1 Midasin yes yes 2 9.6282E-18 250.06 By MS/MS 1.5 0.5 1 1 2 1117000 1117000 0 13244 2580 14031 33782;33783 26994;26995 26994 2 301180 0 TDTESELDLISR RMFGIPVVVAVNAFKTDTESELDLISRLSR AFKTDTESELDLISRLSREHGAFDAVKCTH K T D S R L 0 1 0 2 0 0 2 0 0 1 2 0 0 0 0 2 2 0 0 0 0 0 12 0 1377.6624 P11586 P11586 761 772 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 7.742E-05 180.66 By MS/MS By matching 5 1.41 2 1 2 1 10300000 10254000 45288 13245 582 14032 33784;33785;33786 26996;26997 26996 2 926410 96493 TDTGEPMGR QYAWESSAGGSFTVRTDTGEPMGRGTKVIL GSFTVRTDTGEPMGRGTKVILHLKEDQTEY R T D G R G 0 1 0 1 0 0 1 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 9 0 962.41274 P07900 P07900 174 182 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.027537 85.67 By MS/MS 4 0 1 1 696260 696260 0 13246 513 14033 33787 26998 26998 1 65523 0 TDTLEDLFPTTK DALIDSMSLAKKDEKTDTLEDLFPTTKIPN DEKTDTLEDLFPTTKIPNPRFQRLFQCLLH K T D T K I 0 0 0 2 0 0 1 0 0 0 2 1 0 1 1 0 4 0 0 0 0 0 12 0 1379.682 P13010 P13010 470 481 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 1.1254E-05 204.56 By MS/MS 4.5 0.5 1 1 2 1619900 1619900 0 13247 597 14034 33788;33789 26999;27000 26999 2 96087 0 TDTRAEIDLVCELAK QLFGVPVVVALNVFKTDTRAEIDLVCELAK TDTRAEIDLVCELAKRAGAFDAVPCYHWSV K T D A K R 2 1 0 2 1 0 2 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 15 1 1732.8665 Q6UB35 Q6UB35 804 818 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 3.6176E-05 191.19 By MS/MS 4 0 1 1 573380 573380 0 13248 1728 14035 33790 27001;27002 27001 2 53959 0 TDTVLILCR LLKPISVEGSSKKVKTDTVLILCRKKVENT SSKKVKTDTVLILCRKKVENTRWDYLTQVE K T D C R K 0 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 9 0 1089.5852 Q9HB71 Q9HB71 147 155 CACYBP Calcyclin-binding protein yes yes 2 3.8148E-07 194.2 By MS/MS 8.5 0.5 1 1 2 5654900 5654900 0 13249 2501 14036 33791;33792 27003 27003 1 72145 0 TDVLTGLSIR QEQEIDGKSLLLMQRTDVLTGLSIRLGPAL LLMQRTDVLTGLSIRLGPALKIYEHHIKVL R T D I R L 0 1 0 1 0 0 0 1 0 1 2 0 0 0 0 1 2 0 0 1 0 0 10 0 1073.6081 Q6SPF0 Q6SPF0 499 508 SAMD1 Atherin yes yes 2 0.0012537 118.71 By MS/MS 5 0 1 1 401060 401060 0 13250 1725 14037 33793 27004 27004 1 4022.4 0 TDYNASVSVPDSSGPER GAVIGKGGKNIKALRTDYNASVSVPDSSGP YNASVSVPDSSGPERILSISADIETIGEIL R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 4.9332E-12 247.11 By MS/MS By MS/MS 6 0.707 1 2 1 3 1 7964900 7917800 47092 13251 1135 14038 33794;33795;33796;33797 27005;27006;27007 27007 3 63855 48256 TDYTLSIANR SCYFGQLLSKLDRIKTDYTLSIANRLYGEQ LDRIKTDYTLSIANRLYGEQEFPICQEYLD K T D N R L 1 1 1 1 0 0 0 0 0 1 1 0 0 0 0 1 2 0 1 0 0 0 10 0 1152.5775 Q96P63 Q96P63 108 117 SERPINB12 Serpin B12 yes yes 2 0.00018642 155.84 By matching By MS/MS 3 0.816 1 1 1 1 2 531160 182980 348180 13252 2207 14039 33798;33799;33800 27008 27008 1 17219 122570 TEAESWYQTK AEVKAQYEEIANRSRTEAESWYQTKYEELQ ANRSRTEAESWYQTKYEELQQTAGRHGDDL R T E T K Y 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 2 1 1 0 0 0 10 0 1241.5564 CON__P13647;P13647;CON__Q922U2 CON__P13647 355 364 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.5205E-23 259.58 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 1613100 634300 978840 + 13253 52;74 14040 33801;33802 27009;27010 27009 1 59691 124590 TEAHKEIHSQQVK QIFMRTCSEAIQQLRTEAHKEIHSQQVKEH LRTEAHKEIHSQQVKEHRTAVLDFIEDYLK R T E V K E 1 0 0 0 0 2 2 0 2 1 0 2 0 0 0 1 1 0 0 1 0 0 13 1 1533.79 Q9P2W9 Q9P2W9 116 128 STX18 Syntaxin-18 yes yes 3 0.011485 131.79 By MS/MS 7 0 1 1 1856500 1856500 0 13254 2691 14041 33803 27011 27011 1 29143 0 TEALTQAFR TAIAGSEIFSLEMSKTEALTQAFRRSIGVR SLEMSKTEALTQAFRRSIGVRIKEETEIIE K T E F R R 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1035.5349 Q9Y230 Q9Y230 116 124 RUVBL2 RuvB-like 2 yes yes 2 9.4712E-05 163.15 By MS/MS By matching 6.75 0.829 2 1 1 3 1 13955000 13851000 104220 13255 2810 14042 33804;33805;33806;33807 27012 27012 1 101730 106790 TEAQANQISLPR NLLTKIILEHVSTWRTEAQANQISLPRLVD TWRTEAQANQISLPRLVDLDWRVDIKTSSD R T E P R L 2 1 1 0 0 2 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 12 0 1326.6892 Q9P000 Q9P000 111 122 COMMD9 COMM domain-containing protein 9 yes yes 2 0.00028065 145.23 By MS/MS 9 0 1 1 668830 668830 0 13256 2658 14043 33808 27013 27013 1 13163 0 TEAQGITGARPK RPKTEVQVMGGARPKTEAQGITGARPKTDA RPKTEAQGITGARPKTDARAVGGARSKTDA K T E P K T 2 1 0 0 0 1 1 2 0 1 0 1 0 0 1 0 2 0 0 0 0 0 12 1 1227.6571 Q96D09 Q96D09 88 99 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 0.0015253 143.4 By MS/MS 4 0 1 1 789370 789370 0 13257 2131 14044 33809 27014 27014 1 74285 0 TEAVASSLYDILAR TGWLDHWGQPHSTIKTEAVASSLYDILARG KTEAVASSLYDILARGASVNLYMFIGGTNF K T E A R G 3 1 0 1 0 0 1 0 0 1 2 0 0 0 0 2 1 0 1 1 0 0 14 0 1507.7882 P16278 P16278 286 299 GLB1 Beta-galactosidase yes yes 2 0.0003286 167.18 By MS/MS 5.5 0.5 1 1 2 344750 344750 0 13258 630 14045 33810;33811 27015;27016 27015 2 2621.1 0 TEDFIIDTLELR RSFLGLTCLMQISTRTEDFIIDTLELRSDM STRTEDFIIDTLELRSDMYILNESLTDPAI R T E L R S 0 1 0 2 0 0 2 0 0 2 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1463.7508 Q01780 Q01780 335 346 EXOSC10 Exosome component 10 yes yes 2 5.3564E-06 205.53 By MS/MS 4 0 1 1 111240 111240 0 13259 1269 14046 33812 27017;27018 27018 2 10469 0 TEDGKIYQR AAVVELENYGMPFSRTEDGKIYQRAFGGQS GMPFSRTEDGKIYQRAFGGQSLKFGKGGQA R T E Q R A 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1108.5513 P31040 P31040 163 171 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.0033573 141.2 By MS/MS 5.5 0.5 1 1 2 3567400 3567400 0 13260 783 14047 33813;33814 27019 27019 1 34663 0 TEDIIIKDK DFPDEEEEEEETSVKTEDIIIKDKAKGKKS EETSVKTEDIIIKDKAKGKKSKAAAKAGSS K T E D K A 0 0 0 2 0 0 1 0 0 3 0 2 0 0 0 0 1 0 0 0 0 0 9 1 1073.5968 Q9P2J5 Q9P2J5 131 139 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0046481 134.77 By MS/MS 3.5 0.5 1 1 2 735650 735650 0 13261 2684 14048 33815;33816 27020 27020 1 26258 0 TEDLFENR LSSFPPLPGAAGNLKTEDLFENRLSSLIIG GAAGNLKTEDLFENRLSSLIIGPSKERTLS K T E N R L 0 1 1 1 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 8 0 1022.4669 Q92615 Q92615 546 553 LARP4B La-related protein 4B yes yes 2 0.013368 107.01 By MS/MS 4 0 1 1 1295900 1295900 0 13262 2063 14049 33817 27021 27021 1 121950 0 TEDRKEYNIGVLR FGYPQQFEDKPALSKTEDRKEYNIGVLRHL SKTEDRKEYNIGVLRHLQVIFGHLAASRLQ K T E L R H 0 2 1 1 0 0 2 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 13 2 1591.8318 Q93008;O00507 Q93008 1633 1645 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 3 0.0063823 117.93 By MS/MS 1.5 0.5 1 1 2 2107300 2107300 0 13263 2085 14050 33818;33819 27022 27022 1 698740 0 TEEALQLYNQIIK IIHGQMAYILQLQGRTEEALQLYNQIIKLK GRTEEALQLYNQIIKLKPTDVGLLAVIANN R T E I K L 1 0 1 0 0 2 2 0 0 2 2 1 0 0 0 0 1 0 1 0 0 0 13 0 1561.8352 O76094 O76094 242 254 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.00013313 169.99 By MS/MS 5 0 1 1 4008200 4008200 0 13264 362 14051 33820 27023 27023 1 40200 0 TEEIPNLENSNFSTK CFHVNGIVQKYEMIKTEEIPNLENSNFSTK TEEIPNLENSNFSTKVIKDIAQNILSFLKS K T E T K V 0 0 3 0 0 0 3 0 0 1 1 1 0 1 1 2 2 0 0 0 0 0 15 0 1721.8108 Q3B7T1 Q3B7T1 383 397 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.0010843 121.76 By MS/MS 3 0 1 1 195760 195760 0 13265 1574 14052 33821 27024 27024 1 3581.8 0 TEELNKEVASNSELVQSSR AEKNRRDAETWFLSKTEELNKEVASNSELV NKEVASNSELVQSSRSEVTELRRVLQGLEI K T E S R S 1 1 2 0 0 1 4 0 0 0 2 1 0 0 0 4 1 0 0 2 0 0 19 1 2119.0393 CON__P08779;P08779 CON__P08779 312 330 KRT16 Keratin, type I cytoskeletal 16 yes no 2;3 3.2039E-44 293.38 By MS/MS By MS/MS 5 2.67 2 4 2 1 1 1 1 2 8 6 15186000 9074000 6112000 + 13266 47 14053 33822;33823;33824;33825;33826;33827;33828;33829;33830;33831;33832;33833;33834;33835 27025;27026;27027;27028;27029;27030;27031;27032;27033 27028 9 522360 2716800 TEELNREVATNSELVQSGK AEKNRKDAEEWFFTKTEELNREVATNSELV NREVATNSELVQSGKSEISELRRTMQNLEI K T E G K S 1 1 2 0 0 1 4 1 0 0 2 1 0 0 0 2 2 0 0 2 0 0 19 1 2103.0444 CON__Q04695;Q04695;CON__P02533;P02533 CON__P02533 310 328 KRT17;KRT14 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14 no no 2;3 2.4689E-36 273.32 By MS/MS By MS/MS 4 2.68 1 2 3 2 1 1 4 6 12656000 6639100 6017300 + 13267 39;57 14054 33836;33837;33838;33839;33840;33841;33842;33843;33844;33845 27034;27035;27036;27037;27038;27039;27040;27041;27042 27036 9 662860 1419700 TEEREQIKTLNNK TPLNLQIDPSIQRVRTEEREQIKTLNNKFA VRTEEREQIKTLNNKFASFIDKVRFLEQQN R T E N K F 0 1 2 0 0 1 3 0 0 1 1 2 0 0 0 0 2 0 0 0 0 0 13 2 1601.8373 CON__P13647;P13647;CON__Q922U2 CON__P13647 166 178 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 0.001324 145.81 By matching By MS/MS 3.89 2.42 2 1 2 1 1 1 1 1 8 6413500 71676 6341800 + 13268 52;74 14055 33846;33847;33848;33849;33850;33851;33852;33853;33854 27043;27044;27045;27046;27047 27044 5 17272 2426500 TEFAGDKFKEEK GQTGPYRRPQRLRKRTEFAGDKFKEEKVFE RKRTEFAGDKFKEEKVFEPNEEALGVVLHK R T E E K V 1 0 0 1 0 0 3 1 0 0 0 3 0 2 0 0 1 0 0 0 0 0 12 2 1427.6933 O43615 O43615 211 222 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 2.6077E-08 222.18 By MS/MS 7 0 1 1 745630 745630 0 13269 221 14056 33855 27048 27048 1 11705 0 TEFDVAVDELSLNPGK EWGAFGDNGCLDDFRTEFDVAVDELSLNPG EFDVAVDELSLNPGKQRFEKMISGMYLGEI R T E G K Q 1 0 1 2 0 0 2 1 0 0 2 1 0 1 1 1 1 0 0 2 0 0 16 0 1732.8519 P52789 P52789 723 738 HK2 Hexokinase-2 yes yes 2 2.9242E-11 241.15 By MS/MS 4 0 1 1 370590 370590 0 13270 1023 14057 33856 27049;27050 27050 2 34875 0 TEFWLISAPGEK ______________________________ ______________________________ M T E E K T 1 0 0 0 0 0 2 1 0 1 1 1 0 1 1 1 1 1 0 0 0 0 12 0 1376.6976 P21283 P21283 2 13 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 2 0.026397 83.397 By MS/MS 7 0 1 1 77000 77000 0 13271 676 14058 33857 27051 27051 1 1208.8 0 TEGDIFAIVSK YNTIETFNELFDAHKTEGDIFAIVSKAEEF DAHKTEGDIFAIVSKAEEFDQIKVREEEIE K T E S K A 1 0 0 1 0 0 1 1 0 2 0 1 0 1 0 1 1 0 0 1 0 0 11 0 1178.6183 Q8N3C0 Q8N3C0 1007 1017 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.0061722 100.82 By MS/MS 1.5 0.5 1 1 2 188680 188680 0 13272 1911 14059 33858;33859 27052;27053 27053 2 52919 0 TEGLSVLSQAMAVIK IAPPRYVMTTTTLERTEGLSVLSQAMAVIK TEGLSVLSQAMAVIKEKIEEKRGVFNVQME R T E I K E 2 0 0 0 0 1 1 1 0 1 2 1 1 0 0 2 1 0 0 2 0 0 15 0 1545.8436 P05198 P05198 245 259 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 1.6627E-07 219.92 By MS/MS 7 0 1 1 222130 222130 0 13273 489 14060 33860 27054 27054 193 1 3487 0 TEHAEFLHCK IVTRRPLILQLIFSKTEHAEFLHCKSKKFT LIFSKTEHAEFLHCKSKKFTDFDEVRQEIE K T E C K S 1 0 0 0 1 0 2 0 2 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1270.5765 P50570 P50570 78 87 DNM2 Dynamin-2 yes yes 3 0.017059 102.07 By MS/MS 4 0 1 1 327770 327770 0 13274 977 14061 33861 27055 27055 1 30846 0 TEIIILATR EDGYSGVEVRVTPTRTEIIILATRTQNVLG RVTPTRTEIIILATRTQNVLGEKGRRIREL R T E T R T 1 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1028.623 P23396 P23396 46 54 RPS3 40S ribosomal protein S3 yes yes 2 6.1428E-05 169.44 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 13785000 13785000 0 13275 703 14062 33862;33863;33864;33865;33866;33867 27056;27057;27058;27059;27060 27060 5 275630 0 TEILAVNVDSK DCFQRTPKKLCIPEKTEILAVNVDSKGVHA IPEKTEILAVNVDSKGVHAVLKTGNWVRYC K T E S K G 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1187.6398 O95071 O95071 744 754 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0081408 95.618 By MS/MS 2 0.816 1 1 1 3 304500 304500 0 13276 384 14063 33868;33869;33870 27061 27061 1 52181 0 TEISDKITSELVSK EPDDGSNDVVDLLPRTEISDKITSELVSKI RTEISDKITSELVSKIGDKNWKIRKEGLDE R T E S K I 0 0 0 1 0 0 2 0 0 2 1 2 0 0 0 3 2 0 0 1 0 0 14 1 1548.8247 Q14008 Q14008 855 868 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 5.6838E-16 217.91 By MS/MS 2 0.816 1 1 1 3 1663300 1663300 0 13277 1417 14064 33871;33872;33873 27062 27062 1 511750 0 TEKIEVK LFNKEKARQLSLTPRTEKIEVKHVGKTDPG RQLSLTPRTEKIEVKHVGKTDPGTVFVMNK R T E V K H 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 1 0 0 1 0 0 7 1 845.48583 Q9NYK5 Q9NYK5 62 68 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.048746 135.77 By MS/MS 7.5 0.5 1 1 2 2159300 2159300 0 13278 2635 14065 33874;33875 27063 27063 1 30625 0 TELADKVTK LQELQVKFNEGERVRTELADKVTKLQVELD EGERVRTELADKVTKLQVELDNVTGLLSQS R T E T K L 1 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 1 0 0 9 1 1003.555 P35579 P35579 1269 1277 MYH9 Myosin-9 yes yes 2 0.027274 102.06 By MS/MS 2 0 1 1 1212500 1212500 0 13279 824 14066 33876 27064 27064 1 410120 0 TELAEPIAIR ADFAPEVAWVTRSGKTELAEPIAIRPTSET TRSGKTELAEPIAIRPTSETVMYPAYAKWV K T E I R P 2 1 0 0 0 0 2 0 0 2 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1111.6237 P07814 P07814 1110 1119 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0045125 106.68 By MS/MS 3 0 1 1 749420 749420 0 13280 512 14067 33877 27065 27065 1 13712 0 TELCGNCGR SILKLKEHEDYCGARTELCGNCGRNVLVKD DYCGARTELCGNCGRNVLVKDLKTHPEVCG R T E G R N 0 1 1 0 2 0 1 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1065.4332 O14545 O14545 113 121 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 0.052085 75.043 By MS/MS 5 0 1 1 620730 620730 0 13281 125 14068 33878 27066 27066 1 6225.6 0 TELGLDLGLEPK ARLREMLSVGLGFLRTELGLDLGLEPKRYP FLRTELGLDLGLEPKRYPGWVILVGTGALG R T E P K R 0 0 0 1 0 0 2 2 0 0 4 1 0 0 1 0 1 0 0 0 0 0 12 0 1283.6973 Q86UE4 Q86UE4 34 45 MTDH Protein LYRIC yes yes 2 2.8931E-05 188.28 By MS/MS 5 0 1 1 973820 973820 0 13282 1819 14069 33879 27067 27067 1 9767 0 TELLTEALR SGKKSETLKFSTEHRTELLTEALRFRTDFS FSTEHRTELLTEALRFRTDFSEGKITGRRY R T E L R F 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 9 0 1044.5815 O75165 O75165 91 99 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00078147 138.06 By MS/MS 2 0 1 1 361840 361840 0 13283 302 14070 33880 27068 27068 1 122390 0 TEMSEVLTEILR LTDKVTDLLGGLFSKTEMSEVLTEILRVDP FSKTEMSEVLTEILRVDPAFDKDRFLKQCE K T E L R V 0 1 0 0 0 0 3 0 0 1 2 0 1 0 0 1 2 0 0 1 0 0 12 0 1419.7279 O43615 O43615 294 305 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 1.5504E-13 246.86 By MS/MS 7 0 1 1 403700 403700 0 13284 221 14071 33881 27069 27069 111 1 6337.4 0 TENCLSSCVDR WDKCVEKPGNRLDSRTENCLSSCVDRFIDT LDSRTENCLSSCVDRFIDTTLAITSRFAQI R T E D R F 0 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1339.5496 Q9Y5J9 Q9Y5J9 52 62 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 0.00011631 150.46 By MS/MS 10 0 1 1 441020 441020 0 13285 2911 14072 33882 27070 27070 1 23769 0 TENLVDSSVTFK LVAQRGERLELLIDKTENLVDSSVTFKTTS IDKTENLVDSSVTFKTTSRNLARAMCMKNL K T E F K T 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 2 2 0 0 2 0 0 12 0 1338.6667 P51809 P51809 161 172 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.0004848 134.75 By MS/MS 9 0 1 1 495150 495150 0 13286 1007 14073 33883 27071 27071 1 9744.6 0 TENPLILIDEVDK GAMPGKIIQCLKKTKTENPLILIDEVDKIG TKTENPLILIDEVDKIGRGYQGDPSSALLE K T E D K I 0 0 1 2 0 0 2 0 0 2 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1497.7926 P36776 P36776 582 594 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.00023403 166.7 By MS/MS 4.5 0.5 1 1 2 305140 305140 0 13287 839 14074 33884;33885 27072;27073 27073 2 24353 0 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR EEVGIAEAGPESEVRTEPAAEAEAASGPSE PPVPAQGEAPGEQARDERSDSRAQAVSEDA R T E A R D 11 1 0 0 0 2 9 4 1 0 1 0 0 0 10 5 1 0 0 1 0 0 46 0 4457.0531 P55884 P55884 68 113 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 4 0.007162 38.475 By MS/MS 4.5 0.5 1 1 2 3377300 3377300 0 13288 1065 14075 33886;33887 27074;27075;27076;27077 27074 4 218450 0 TEPTAQQNLALQLAEK MASLDQPTQTVVMHRTEPTAQQNLALQLAE EPTAQQNLALQLAEKLGSLVENNERVFDHK R T E E K L 3 0 1 0 0 3 2 0 0 0 3 1 0 0 1 0 2 0 0 0 0 0 16 0 1753.921 Q99613;B5ME19 Q99613 847 862 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 4.1371E-56 342.58 By MS/MS By MS/MS 4.41 2.66 2 3 2 4 1 1 1 1 1 1 14 3 202930000 202310000 621720 13289 2252 14076 33888;33889;33890;33891;33892;33893;33894;33895;33896;33897;33898;33899;33900;33901;33902;33903;33904 27078;27079;27080;27081;27082;27083;27084;27085;27086;27087;27088;27089;27090;27091;27092 27081 15 16213000 1224700 TEQAISFAK ______________________________ ______________________________ M T E A K D 2 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 9 0 993.51311 P12236 P12236 2 10 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.00026401 154.85 By MS/MS By MS/MS 5.7 2.97 1 1 1 1 1 1 2 1 1 9 1 57145000 56530000 615170 13290 589 14077 33905;33906;33907;33908;33909;33910;33911;33912;33913;33914 27093;27094;27095;27096;27097;27098;27099 27098 7 2734000 830150 TERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTR KLFDSTTLEHQKTFRTERPVNSAALSPNYD GGGQEAMDVTTTSTRIGKFEARFFHLAFEE R T E T R I 3 2 2 2 0 1 2 3 1 0 2 0 1 0 2 3 5 0 1 4 0 0 34 1 3572.7165 Q13347 Q13347 228 261 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 4 1.3293E-05 70.151 By MS/MS 7 0 1 1 1282000 1282000 0 13291 1372 14078 33915 27100 27100 801 1 20125 0 TESAVSQMQSVIELGR YLMLPRVREELIDKKTESAVSQMQSVIELG ESAVSQMQSVIELGRVIRDRKTIPIKYPLK K T E G R V 1 1 0 0 0 2 2 1 0 1 1 0 1 0 0 3 1 0 0 2 0 0 16 0 1733.8618 P41252 P41252 818 833 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 5.5711E-44 328.43 By MS/MS 3.33 0.471 2 1 3 1404100 1404100 0 13292 871 14079;14080 33916;33917;33918 27101;27102 27101 458 2 47546 0 TESEPGQQPMELENK NKLLKGKARGHFQGKTESEPGQQPMELENK TESEPGQQPMELENKAAVPLGGFLCNVADK K T E N K A 0 0 1 0 0 2 4 1 0 0 1 1 1 0 2 1 1 0 0 0 0 0 15 0 1715.7672 Q7L8L6 Q7L8L6 646 660 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 4.8059E-05 193.15 By MS/MS 5 0 1 1 809100 809100 0 13293 1771 14081 33919 27103 27103 1 8114.8 0 TESFQNAQAGSNPK RNSMDSVDSCCSLKKTESFQNAQAGSNPKK KTESFQNAQAGSNPKKVDLIIWEIEVPKHL K T E P K K 2 0 2 0 0 2 1 1 0 0 0 1 0 1 1 2 1 0 0 0 0 0 14 0 1477.6797 Q92667 Q92667 590 603 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 3.2453E-07 209.67 By MS/MS 3 0 1 1 567960 567960 0 13294 2068 14082 33920 27104 27104 1 10392 0 TESPVLTSSCR LLAAGVVSAMVCMVKTESPVLTSSCRELLS CMVKTESPVLTSSCRELLSRVFLALVEEVE K T E C R E 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 3 2 0 0 1 0 0 11 0 1235.5816 Q9H3U1 Q9H3U1 654 664 UNC45A Protein unc-45 homolog A yes yes 2 0.00023376 140.17 By MS/MS 4.5 0.5 1 1 2 1237500 1237500 0 13295 2442 14083 33921;33922 27105 27105 1 91150 0 TESTPITAVKQPEK LKSVPLATAPMAEQRTESTPITAVKQPEKV RTESTPITAVKQPEKVAATRQEIFQEQLAA R T E E K V 1 0 0 0 0 1 2 0 0 1 0 2 0 0 2 1 3 0 0 1 0 0 14 1 1527.8144 Q9Y678 Q9Y678 591 604 COPG1 Coatomer subunit gamma-1 yes yes 2;3 0.002225 135.1 By MS/MS 4.33 0.471 2 1 3 3199200 3199200 0 13296 2933 14084 33923;33924;33925 27106;27107;27108 27107 3 247540 0 TETPPPLASLNVSK INLQYVSEVEIINDRTETPPPLASLNVSKL RTETPPPLASLNVSKLASKARTEKEEKLSQ R T E S K L 1 0 1 0 0 0 1 0 0 0 2 1 0 0 3 2 2 0 0 1 0 0 14 0 1452.7824 Q3MHD2 Q3MHD2 73 86 LSM12 Protein LSM12 homolog yes yes 2 0.007139 97.957 By MS/MS 8.5 0.5 1 1 2 1500300 1500300 0 13297 1577 14085 33926;33927 27109 27109 1 27052 0 TETSETEITTTEIIK DDMAAKAPPGGGTTRTETSETEITTTEIIK TETSETEITTTEIIKRRDVGPYGIRSEYCI R T E I K R 0 0 0 0 0 0 4 0 0 3 0 1 0 0 0 1 6 0 0 0 0 0 15 0 1694.8462 Q12830 Q12830 1935 1949 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 2 0.00055601 153.34 By MS/MS 1.5 0.5 1 1 2 279160 279160 0 13298 1331 14086 33928;33929 27110 27110 1 73479 0 TETTVTRHEADSSPR GIVEERRTVVDSEGRTETTVTRHEADSSPR TETTVTRHEADSSPRGDPESPRPPALDDAF R T E P R G 1 2 0 1 0 0 2 0 1 0 0 0 0 0 1 2 4 0 0 1 0 0 15 1 1685.7969 O00165 O00165 236 250 HAX1 HCLS1-associated protein X-1 yes yes 3 0.0028917 104.7 By MS/MS 7.5 0.5 1 1 2 1363400 1363400 0 13299 86 14087 33930;33931 27111;27112 27111 1 20480 0 TETVTSFR HDVGAYMLMYKGANRTETVTSFRKRESKVP MYKGANRTETVTSFRKRESKVPADLLKRAF R T E F R K 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 3 0 0 1 0 0 8 0 939.46616 P78527 P78527 3865 3872 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0038052 131.03 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 6536400 6536400 0 13300 1225 14088 33932;33933;33934;33935;33936;33937;33938;33939 27113;27114;27115;27116 27113 4 988310 0 TEVIPPLIENR LLSGGNTLHLVSTTKTEVIPPLIENRQSWS STTKTEVIPPLIENRQSWSVCKQVFPGLNY K T E N R Q 0 1 1 0 0 0 2 0 0 2 1 0 0 0 2 0 1 0 0 1 0 0 11 0 1279.7136 P04114 P04114 950 960 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 0.0011415 109.79 By MS/MS 2.5 1.12 1 1 1 1 4 1304600 1304600 0 13301 468 14089 33940;33941;33942;33943 27117;27118;27119;27120 27118 4 210720 0 TEVIQLEDTLAQVR ELIERDEVSLHKKLRTEVIQLEDTLAQVRK RTEVIQLEDTLAQVRKEYEMLRIEFEQTLA R T E V R K 1 1 0 1 0 2 2 0 0 1 2 0 0 0 0 0 2 0 0 2 0 0 14 0 1613.8625 O75150;Q5VTR2 Q5VTR2 436 449 RNF40;RNF20 E3 ubiquitin-protein ligase BRE1B;E3 ubiquitin-protein ligase BRE1A no no 2 1.0374E-23 272.1 By MS/MS 3 0 1 1 130830 130830 0 13302 297;1648 14090 33944 27121;27122 27122 2 2393.8 0 TEVNSGFFYK DAYILTCNVSLEYEKTEVNSGFFYKSAEER LEYEKTEVNSGFFYKSAEEREKLVKAERKF K T E Y K S 0 0 1 0 0 0 1 1 0 0 0 1 0 2 0 1 1 0 1 1 0 0 10 0 1190.5608 P40227;Q92526 P40227 242 251 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 1.6072E-14 225.87 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 46250000 46125000 124630 13303 858 14091 33945;33946;33947;33948;33949 27123;27124;27125;27126;27127;27128 27126 5 381950 127710 TEVPPLLLILDR KQVITKEYELFEFRRTEVPPLLLILDRCDD FRRTEVPPLLLILDRCDDAITPLLNQWTYQ R T E D R C 0 1 0 1 0 0 1 0 0 1 4 0 0 0 2 0 1 0 0 1 0 0 12 0 1377.8232 Q9NRW7 Q9NRW7 207 218 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.0094913 90.827 By MS/MS 5.5 0.5 1 1 2 73991 73991 0 13304 2559 14092 33950;33951 27129 27129 1 678.52 0 TEVVPSSALSEVSLR ______________________________ TEVVPSSALSEVSLRLLCHDDIDTVKHLCG M T E L R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 4 1 0 0 3 0 0 15 0 1572.8359 Q9H7X0 Q9H7X0 2 16 NAA60 N-alpha-acetyltransferase 60 yes yes 2 0.0011636 122.7 By MS/MS 8 0 1 1 107910 107910 0 13305 2466 14093 33952 27130 27130 1 1362.3 0 TEVVSLLLDR TNRNTALTLACFQGRTEVVSLLLDRKANVE CFQGRTEVVSLLLDRKANVEHRAKTGLTPL R T E D R K 0 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 2 0 0 10 0 1143.6499 O75179 O75179 1265 1274 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.00033505 137.95 By MS/MS 1.5 0.5 1 1 2 176390 176390 0 13306 304 14094 33953;33954 27131;27132 27132 2 51535 0 TEWETAAPAVAETPDIK ______________________________ WETAAPAVAETPDIKLFGKWSTDDVQINDI M T E I K L 4 0 0 1 0 0 3 0 0 1 0 1 0 0 2 0 3 1 0 1 0 0 17 0 1827.8891 P46782 P46782 2 18 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 3.1662E-11 223.22 By MS/MS 9 0.707 1 2 1 4 10590000 10590000 0 13307 919 14095 33955;33956;33957;33958 27133;27134 27134 2 208690 0 TEWLDGK GPNTNGSQFFICTAKTEWLDGKHVVFGKVK QFFICTAKTEWLDGKHVVFGKVKEGMNIVE K T E G K H 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 7 0 847.40758 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284;P0DN37 P62937 119 125 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.052962 89.296 By MS/MS 10 0 1 1 683410 683410 0 13308 1188 14096 33959 27135 27135 1 36833 0 TEWLDGKHVVFGK GPNTNGSQFFICTAKTEWLDGKHVVFGKVK AKTEWLDGKHVVFGKVKEGMNIVEAMERFG K T E G K V 0 0 0 1 0 0 1 2 1 0 1 2 0 1 0 0 1 1 0 2 0 0 13 1 1514.7882 P62937 P62937 119 131 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 3 0.014624 83.137 By MS/MS 10 0 1 1 366530 366530 0 13309 1188 14097 33960 27136 27136 1 19755 0 TEYLSNADER HLQQANIQFRTDIARTEYLSNADERLRWQA TDIARTEYLSNADERLRWQASSLPADDLCT R T E E R L 1 1 1 1 0 0 2 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1196.5309 Q14204 Q14204 3550 3559 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00089163 125.71 By MS/MS 1.5 0.5 1 1 2 2335100 2335100 0 13310 1433 14098 33961;33962 27137;27138 27138 2 657880 0 TEYLSNADERLR HLQQANIQFRTDIARTEYLSNADERLRWQA IARTEYLSNADERLRWQASSLPADDLCTEN R T E L R W 1 2 1 1 0 0 2 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 12 1 1465.7161 Q14204 Q14204 3550 3561 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0063033 128.35 By MS/MS 1.33 0.471 2 1 3 1151200 1151200 0 13311 1433 14099 33963;33964;33965 27139;27140 27140 2 295920 0 TFAPEEISAMVLTK TKPYIQVDIGGGQTKTFAPEEISAMVLTKM KTFAPEEISAMVLTKMKETAEAYLGKKVTH K T F T K M 2 0 0 0 0 0 2 0 0 1 1 1 1 1 1 1 2 0 0 1 0 0 14 0 1535.7905 P11021 P11021 139 152 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 5.5921E-05 187.78 By MS/MS 5 0 4 4 6302200 6302200 0 13312 571 14100;14101 33966;33967;33968;33969 27141;27142;27143;27144 27141 256 4 63208 0 TFCQLILDPIFK FSKSATSPEGKKLPRTFCQLILDPIFKVFD LPRTFCQLILDPIFKVFDAIMNFKKEETAK R T F F K V 0 0 0 1 1 1 0 0 0 2 2 1 0 2 1 0 1 0 0 0 0 0 12 0 1493.7952 P13639 P13639 288 299 EEF2 Elongation factor 2 yes yes 2 0.00031485 143 By MS/MS 5 1 1 1 2 132980 132980 0 13313 602 14102 33970;33971 27145;27146;27147 27147 3 6092.5 0 TFDATNPLNLCVK WAVGCVIFELLTLKRTFDATNPLNLCVKIV KRTFDATNPLNLCVKIVQGIRAMEVDSSQY R T F V K I 1 0 2 1 1 0 0 0 0 0 2 1 0 1 1 0 2 0 0 1 0 0 13 0 1491.7392 Q8TD19 Q8TD19 250 262 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 5.503E-18 269.33 By MS/MS 4 0 1 1 945890 945890 0 13314 1995 14103 33972 27148 27148 1 89014 0 TFDEIASGFR FFIFTYFKVPETKGRTFDEIASGFRQGGAS ETKGRTFDEIASGFRQGGASQSDKTPEELF R T F F R Q 1 1 0 1 0 0 1 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 10 0 1141.5404 P11166 P11166 459 468 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 2 3.2414E-05 159.79 By MS/MS 3 1.41 1 1 1 1 1 5 1302200 1302200 0 13315 573 14104 33973;33974;33975;33976;33977 27149;27150 27150 2 253770 0 TFDHYCEYR GLNFSSATTPELLLKTFDHYCEYRRTPNGV PELLLKTFDHYCEYRRTPNGVVLAPVQLGK K T F Y R R 0 1 0 1 1 0 1 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 9 0 1289.5135 Q14204 Q14204 2634 2642 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0025078 98.582 By MS/MS 1.5 0.5 2 2 4 2148700 2148700 0 13316 1433 14105 33978;33979;33980;33981 27151;27152;27153;27154 27152 4 620840 0 TFDQLTPEESKER FDYDHDAFLGAEEAKTFDQLTPEESKERLG AKTFDQLTPEESKERLGKIVSKIDGDKDGF K T F E R L 0 1 0 1 0 1 3 0 0 0 1 1 0 1 1 1 2 0 0 0 0 0 13 1 1578.7526 O43852 O43852 60 72 CALU Calumenin yes yes 2;3 5.3791E-05 215.04 By MS/MS 7.67 0.943 2 1 3 3449500 3449500 0 13317 243 14106 33982;33983;33984 27155;27156;27157 27156 3 55432 0 TFDTFCPLGPALVTK DWQMRRNGKQWLLGKTFDTFCPLGPALVTK TFDTFCPLGPALVTKDSVADPHNLKICCRV K T F T K D 1 0 0 1 1 0 0 1 0 0 2 1 0 2 2 0 3 0 0 1 0 0 15 0 1665.8436 Q96GK7;Q6P2I3 Q96GK7 210 224 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 2 2.5374E-07 217.09 By MS/MS 8 0 1 1 255620 255620 0 13318 1706 14107 33985 27158;27159 27158 2 3227.1 0 TFEVCDLPVR GSVCVWNHETQTLVKTFEVCDLPVRAAKFV QTLVKTFEVCDLPVRAAKFVARKNWVVTGA K T F V R A 0 1 0 1 1 0 1 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 10 0 1234.6016 P35606 P35606 52 61 COPB2 Coatomer subunit beta yes yes 2 1.2432E-07 189.7 By MS/MS 5.5 3.2 1 1 1 1 1 1 1 1 8 7088700 7088700 0 13319 826 14108 33986;33987;33988;33989;33990;33991;33992;33993 27160;27161;27162;27163;27164;27165 27163 5 1093400 0 TFEVTPIR DSKEEKYVAKELAVRTFEVTPIRAKDLEFG AKELAVRTFEVTPIRAKDLEFGGVPGVFLI R T F I R A 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 8 0 961.52328 Q14739 Q14739 196 203 LBR Lamin-B receptor yes yes 2 0.018523 101.28 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 9074300 9074300 0 13320 1456 14109 33994;33995;33996;33997;33998;33999;34000;34001 27166;27167;27168 27167 3 1170300 0 TFFEELAVEDK DKVVKKGKKDKKIKKTFFEELAVEDKQAGE KIKKTFFEELAVEDKQAGEEEKVLKEKEQQ K T F D K Q 1 0 0 1 0 0 3 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 11 0 1326.6343 Q8NE71 Q8NE71 40 50 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 1.6547E-05 167.09 By MS/MS 4.5 0.5 1 1 2 421470 421470 0 13321 1960 14110 34002;34003 27169 27169 1 31287 0 TFGSSLPVK FPHHSITESVNYDVKTFGSSLPVKVMEALT VNYDVKTFGSSLPVKVMEALTLAEVDDQLT K T F V K V 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 2 1 0 0 1 0 0 9 0 934.51238 Q8WUM0 Q8WUM0 83 91 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.0092734 101.72 By MS/MS 3 0 1 1 585560 585560 0 13322 2017 14111 34004 27170 27170 1 10714 0 TFIAIKPDGVQR ______________________________ LERTFIAIKPDGVQRGLVGEIIKRFEQKGF R T F Q R G 1 1 0 1 0 1 0 1 0 2 0 1 0 1 1 0 1 0 0 1 0 0 12 1 1343.7561 P22392;P15531 P22392 7 18 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 2;3 0.00035101 161.51 By MS/MS 9.5 0.5 2 2 4 16963000 16963000 0 13323 692;625 14112 34005;34006;34007;34008 27171;27172;27173;27174 27173 4 756440 0 TFINVVK IQVLSMSGKQAGFIRTFINVVKNEGITALY GKQAGFIRTFINVVKNEGITALYSGLKPTM R T F V K N 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 7 0 819.48544 Q9Y619 Q9Y619 252 258 SLC25A15 Mitochondrial ornithine transporter 1 yes yes 2 0.043363 94.662 By MS/MS 8 0 1 1 2163200 2163200 0 13324 2931 14113 34009 27175 27175 1 27310 0 TFKPAIQELKPPTYK VQSILTKMTGLNLQKTFKPAIQELKPPTYK TFKPAIQELKPPTYKLMTQAQLEEATRQAV K T F Y K L 1 0 0 0 0 1 1 0 0 1 1 3 0 1 3 0 2 0 1 0 0 0 15 2 1759.9873 P82650 P82650 90 104 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3;4 0.0019939 111.07 By MS/MS 7 0 2 2 2717100 2717100 0 13325 1229 14114 34010;34011 27176;27177;27178 27176 3 42653 0 TFLESPLDVGIK IVDPTYIEDFLLTYRTFLESPLDVGIKLLE TYRTFLESPLDVGIKLLEWFKIDSLRDKVT R T F I K L 0 0 0 1 0 0 1 1 0 1 2 1 0 1 1 1 1 0 0 1 0 0 12 0 1317.718 Q8TEU7 Q8TEU7 449 460 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 2 0.0073835 107.21 By MS/MS 2 0 1 1 26952 26952 0 13326 2003 14115 34012 27179 27179 1 9116.3 0 TFLLDSDYER YLKFLGYHHVSRRFRTFLLDSDYERIELGL SRRFRTFLLDSDYERIELGLLYEEKGERRG R T F E R I 0 1 0 2 0 0 1 0 0 0 2 0 0 1 0 1 1 0 1 0 0 0 10 0 1257.5877 O95248;Q86WG5 O95248 1523 1532 SBF1;SBF2 Myotubularin-related protein 5;Myotubularin-related protein 13 yes no 2 0.02414 84.817 By MS/MS 2 0 1 1 212250 212250 0 13327 398 14116 34013 27180 27180 1 71791 0 TFLQDLAR ______________________________ ______________________________ K T F A R G 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 962.51853 O14681 O14681 7 14 EI24 Etoposide-induced protein 2.4 homolog yes yes 2 0.0059596 121.05 By MS/MS 3.67 3.09 1 1 1 3 1182300 1182300 0 13328 132 14117 34014;34015;34016 27181;27182 27182 2 174020 0 TFLQTVSSEK RVQFCPFEKNVESTRTFLQTVSSEKVRSTN VESTRTFLQTVSSEKVRSTNLNCSVIADVR R T F E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 2 2 0 0 1 0 0 10 0 1138.587 Q96EL3 Q96EL3 32 41 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 7.2921E-08 195.36 By MS/MS By MS/MS 10 0 2 1 1 8278300 8195900 82373 13329 2146 14118 34017;34018 27183;27184 27184 2 441730 105460 TFLQTVSSEKVR RVQFCPFEKNVESTRTFLQTVSSEKVRSTN STRTFLQTVSSEKVRSTNLNCSVIADVRHD R T F V R S 0 1 0 0 0 1 1 0 0 0 1 1 0 1 0 2 2 0 0 2 0 0 12 1 1393.7565 Q96EL3 Q96EL3 32 43 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 0.0010171 150.1 By MS/MS 10 0 1 1 444840 444840 0 13330 2146 14119 34019 27185 27185 1 23975 0 TFLVDPNLDLSIR GRYVSAQPLAGRQSRTFLVDPNLDLSIREL SRTFLVDPNLDLSIRELVHRILPVAASYSA R T F I R E 0 1 1 2 0 0 0 0 0 1 3 0 0 1 1 1 1 0 0 1 0 0 13 0 1501.814 Q9BSJ2 Q9BSJ2 245 257 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 1.2609E-05 194.48 By MS/MS 4 0 1 1 346590 346590 0 13331 2307 14120 34020 27186 27186 1 32617 0 TFLVGER VRRILGLLDAYLKTRTFLVGERVTLADITV LDAYLKTRTFLVGERVTLADITVVCTLLWL R T F E R V 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 820.4443 P26641 P26641 150 156 EEF1G Elongation factor 1-gamma yes yes 2 0.017122 116.9 By MS/MS 7 0.816 1 1 1 3 20474000 20474000 0 13332 736 14121 34021;34022;34023 27187 27187 1 190910 0 TFNTSTGGLLLPSDTK KLYRETNEPVKTKTRTFNTSTGGLLLPSDT FNTSTGGLLLPSDTKRSQIYGSRQIILEKE R T F T K R 0 0 1 1 0 0 0 2 0 0 3 1 0 1 1 2 4 0 0 0 0 0 16 0 1650.8465 P12956 P12956 302 317 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 3.9567E-05 196.67 By MS/MS 5 0 1 1 1159500 1159500 0 13333 596 14122 34024 27188 27188 1 11629 0 TFNTSTGGLLLPSDTKR KLYRETNEPVKTKTRTFNTSTGGLLLPSDT NTSTGGLLLPSDTKRSQIYGSRQIILEKEE R T F K R S 0 1 1 1 0 0 0 2 0 0 3 1 0 1 1 2 4 0 0 0 0 0 17 1 1806.9476 P12956 P12956 302 318 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2;3 0.0014041 169.04 By MS/MS 5 0 2 2 4212600 4212600 0 13334 596 14123 34025;34026 27189;27190 27190 2 42251 0 TFRIETR EYKIDEDGKKFKIVRTFRIETRKASKAVAR GKKFKIVRTFRIETRKASKAVARRKNWKKF R T F T R K 0 2 0 0 0 0 1 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 7 1 921.50321 O75821 O75821 84 90 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.041745 84.743 By MS/MS 8 1.41 1 1 1 1 1 5 17390000 17390000 0 13335 348 14124 34027;34028;34029;34030;34031 27191;27192 27191 2 275280 0 TFSEACLMVR VFPHGLPPRFVMQVKTFSEACLMVRKPALE VMQVKTFSEACLMVRKPALELLHYLKNTSF K T F V R K 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 1 1 0 0 1 0 0 10 0 1212.5631 P51398 P51398 93 102 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 6.5019E-06 176.6 By MS/MS 7 0 1 1 938460 938460 0 13336 993 14125 34032 27193 27193 551 1 14732 0 TFSEILNR DLEVRSLETCMYDHKTFSEILNRVQKAVDD TCMYDHKTFSEILNRVQKAVDDLNLHSYSN K T F N R V 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 978.51345 Q14204 Q14204 873 880 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0057163 122.18 By MS/MS 2 0.816 1 1 1 3 1509100 1509100 0 13337 1433 14126 34033;34034;34035 27194 27194 1 400140 0 TFSLTEVR KKESGENPPPKLRRRTFSLTEVRGQVSESE PPKLRRRTFSLTEVRGQVSESEDSITKQIE R T F V R G 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 8 0 951.50255 O95239 O95239 799 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.013368 107.01 By MS/MS 3 0 1 1 353220 353220 0 13338 397 14127 34036 27195 27195 1 6463 0 TFSSIPVSR FVFEPPPGVKANMLRTFSSIPVSRICKSPN KANMLRTFSSIPVSRICKSPNERARLYFLL R T F S R I 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 3 1 0 0 1 0 0 9 0 992.5291 Q14204 Q14204 4160 4168 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0048559 109.48 By MS/MS 2.5 1.12 1 1 1 1 4 2926200 2926200 0 13339 1433 14128 34037;34038;34039;34040 27196;27197 27197 2 530320 0 TFSSTESLR NHDADNVPNLMDETKTFSSTESLRQLSQQL LMDETKTFSSTESLRQLSQQLNGLVCESAT K T F L R Q 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 3 2 0 0 0 0 0 9 0 1026.4982 Q08379 Q08379 120 128 GOLGA2 Golgin subfamily A member 2 yes yes 2 0.035031 82.426 By MS/MS 3 0 1 1 204770 204770 0 13340 1308 14129 34041 27198 27198 1 3746.8 0 TFSWASVTSK PAPADIAQTVQEDLRTFSWASVTSKNLPPS QEDLRTFSWASVTSKNLPPSGAVPVTGIPP R T F S K N 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 3 2 1 0 1 0 0 10 0 1112.5502 Q13283 Q13283 248 257 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.00061223 131.12 By MS/MS 4.5 0.5 1 1 2 1165300 1165300 0 13341 1368 14130 34042;34043 27199 27199 1 31871 0 TFSYAGFEMQPK ALEDSQLVAGVAFKKTFSYAGFEMQPKKYH FKKTFSYAGFEMQPKKYHNPKIALLNVELE K T F P K K 1 0 0 0 0 1 1 1 0 0 0 1 1 2 1 1 1 0 1 0 0 0 12 0 1404.6384 Q99832 Q99832 219 230 CCT7 T-complex protein 1 subunit eta yes yes 2 1.5257E-06 198.62 By MS/MS 6.17 1.07 2 2 1 1 6 29215000 29215000 0 13342 2270 14131;14132 34044;34045;34046;34047;34048;34049 27200;27201 27201 1055 2 207950 0 TFTCTAAYPESK SSVLPGCAEPWNHGKTFTCTAAYPESKTPL HGKTFTCTAAYPESKTPLTATLSKSGNTFR K T F S K T 2 0 0 0 1 0 1 0 0 0 0 1 0 1 1 1 3 0 1 0 0 0 12 0 1374.6126 P01876 P01876 201 212 IGHA1 Ig alpha-1 chain C region yes yes 2 8.9557E-05 160.75 By MS/MS 1 0 1 1 215290 0 215290 13343 455 14133 34050 27202 27202 1 0 215290 TFTEMDSHEEK VALGYRENVNLAQIRTFTEMDSHEEKVFRA AQIRTFTEMDSHEEKVFRAVRETQEREAKA R T F E K V 0 0 0 1 0 0 3 0 1 0 0 1 1 1 0 1 2 0 0 0 0 0 11 0 1352.5554 P48444 P48444 132 142 ARCN1 Coatomer subunit delta yes yes 2 1.562E-06 183.72 By MS/MS 6 0 1 1 1020400 1020400 0 13344 934 14134 34051 27203 27203 1 7014.6 0 TFTEMDSHEEKVFR VALGYRENVNLAQIRTFTEMDSHEEKVFRA RTFTEMDSHEEKVFRAVRETQEREAKAEMR R T F F R A 0 1 0 1 0 0 3 0 1 0 0 1 1 2 0 1 2 0 0 1 0 0 14 1 1754.7934 P48444 P48444 132 145 ARCN1 Coatomer subunit delta yes yes 3 0.022622 74.78 By MS/MS 6 0 1 1 4362900 4362900 0 13345 934 14135 34052 27204 27204 1 29991 0 TFTFDTVFGPESK TITVHKTDSSNEPPKTFTFDTVFGPESKQL PKTFTFDTVFGPESKQLDVYNLTARPIIDS K T F S K Q 0 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 3 0 0 1 0 0 13 0 1474.698 Q9Y496 Q9Y496 60 72 KIF3A Kinesin-like protein KIF3A yes yes 2 0.032711 77.744 By MS/MS 5 0 1 1 149350 149350 0 13346 2889 14136 34053 27205 27205 1 1497.9 0 TFTWLVGK AAYARDALAKAVYSRTFTWLVGKINRSLAS AKAVYSRTFTWLVGKINRSLASKDVESPSW R T F G K I 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 2 1 0 1 0 0 8 0 950.52255 O00159 O00159 389 396 MYO1C Unconventional myosin-Ic yes yes 2 0.0040963 129.68 By MS/MS 4 0 1 1 343520 343520 0 13347 85 14137 34054 27206 27206 1 32328 0 TFVEESIYNEFLER ALFFNMGQCCCAGSRTFVEESIYNEFLERT RTFVEESIYNEFLERTVEKAKQRKVGNPFE R T F E R T 0 1 1 0 0 0 4 0 0 1 1 0 0 2 0 1 1 0 1 1 0 0 14 0 1774.8414 P30837 P30837 325 338 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 7.1757E-24 322.77 By MS/MS 6 0 1 1 679050 679050 0 13348 780 14138 34055 27207;27208 27207 2 4668 0 TFVHVVPAKPEGTFK VDLITRLPKGAVLYKTFVHVVPAKPEGTFK TFVHVVPAKPEGTFKLVAML__________ K T F F K L 1 0 0 0 0 0 1 1 1 0 0 2 0 2 2 0 2 0 0 3 0 0 15 1 1655.9035 Q9P0M9 Q9P0M9 129 143 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 3 0.00048863 127.71 By MS/MS 10 0 1 1 1105500 1105500 0 13349 2666 14139 34056 27209 27209 1 59581 0 TFVNITPAEVGVLVGK GYKDSPSVWAAVPGKTFVNITPAEVGVLVG FVNITPAEVGVLVGKDRSSFYVNGLTLGGQ K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737 P07737 39 54 PFN1 Profilin-1 yes yes 2 0.00036503 188.96 By MS/MS 10 0 1 1 198490 198490 0 13350 510 14140 34057 27210;27211 27210 2 10698 0 TFVQEDIYDEFVER ALFFNQGQCCCAGSRTFVQEDIYDEFVERS RTFVQEDIYDEFVERSVARAKSRVVGNPFD R T F E R S 0 1 0 2 0 1 3 0 0 1 0 0 0 2 0 0 1 0 1 2 0 0 14 0 1788.8206 P05091 P05091 325 338 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 3.2028E-17 267.37 By MS/MS 6 0 1 1 1395900 1395900 0 13351 485 14141 34058 27212 27212 1 9595.8 0 TFVSGACDASIK HSGDVMSLSLAPDGRTFVSGACDASIKLWD DGRTFVSGACDASIKLWDVRDSMCRQTFIG R T F I K L 2 0 0 1 1 0 0 1 0 1 0 1 0 1 0 2 1 0 0 1 0 0 12 0 1254.5914 P62879 P62879 198 209 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes yes 2 0.00095371 126.03 By MS/MS 8 0 1 1 2307200 2307200 0 13352 1181 14142 34059 27213 27213 1 29128 0 TGAAEGLAK KLLSDFLDSEVSELRTGAAEGLAKLMFSGL EVSELRTGAAEGLAKLMFSGLLVSSRILSR R T G A K L 3 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 816.43413 Q9BPX3 Q9BPX3 709 717 NCAPG Condensin complex subunit 3 yes yes 2 0.0024578 115.49 By MS/MS 3.5 0.5 1 1 2 958550 958550 0 13353 2279 14143 34060;34061 27214 27214 1 58539 0 TGAAGAEALSLLLK IPTLIDRMLVSSNTKTGAAGAEALSLLLKR KTGAAGAEALSLLLKRPWDPAVGVLSHNKP K T G L K R 4 0 0 0 0 0 1 2 0 0 4 1 0 0 0 1 1 0 0 0 0 0 14 0 1313.7555 Q9P2N6 Q9P2N6 237 250 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 2 0.0056867 102.05 By MS/MS 4 0 1 1 77319 77319 0 13354 2686 14144 34062 27215 27215 1 7276.3 0 TGAAPIIDVVR TLVSEQTRVNAAKNKTGAAPIIDVVRSGYY AKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ K T G V R S 2 1 0 1 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1110.6397 P46776 P46776 95 105 RPL27A 60S ribosomal protein L27a yes yes 2 0.0001969 143.4 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 19592000 19406000 185570 13355 914 14145 34063;34064;34065 27216;27217;27218 27217 3 536450 423160 TGAAYPCFCSPQR QRLELYAQATEALLKTGAAYPCFCSPQRLE LKTGAAYPCFCSPQRLELLKKEALRNHQTP K T G Q R L 2 1 0 0 2 1 0 1 0 0 0 0 0 1 2 1 1 0 1 0 0 0 13 0 1513.6442 Q5JPH6 Q5JPH6 134 146 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.0086128 92.866 By MS/MS 6 0 1 1 2265200 2265200 0 13356 1605 14146 34066 27219 27219 1 15572 0 TGAEGAVLDEAK KLYLVDLAGSEKVSKTGAEGAVLDEAKNIN VSKTGAEGAVLDEAKNINKSLSALGNVISA K T G A K N 3 0 0 1 0 0 2 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 12 0 1159.5721 P33176;Q12840;O60282 P33176 241 252 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 2.3837E-05 175.65 By MS/MS 3.5 0.5 1 1 2 4560800 4560800 0 13357 800 14147 34067;34068 27220 27220 1 404110 0 TGAEGAVLDEAKNINK KLYLVDLAGSEKVSKTGAEGAVLDEAKNIN GAEGAVLDEAKNINKSLSALGNVISALAEG K T G N K S 3 0 2 1 0 0 2 2 0 1 1 2 0 0 0 0 1 0 0 1 0 0 16 1 1628.837 P33176;Q12840;O60282 P33176 241 256 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2;3 2.4533E-23 303.71 By MS/MS 3.67 0.471 1 2 3 4772500 4772500 0 13358 800 14148 34069;34070;34071 27221;27222;27223 27223 3 441520 0 TGAELVTCGSVLK GLLLALLVPGGGAAKTGAELVTCGSVLKLL AKTGAELVTCGSVLKLLNTHHRVRLHSHDI K T G L K L 1 0 0 0 1 0 1 2 0 0 2 1 0 0 0 1 2 0 0 2 0 0 13 0 1333.6912 Q9HCN8 Q9HCN8 31 43 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 1.0722E-05 195.83 By MS/MS 9.5 0.5 1 1 2 2664600 2664600 0 13359 2516 14149 34072;34073 27224 27224 1 56725 0 TGAESISLLELCR RTQQMLHGLQRALAKTGAESISLLELCRNT AKTGAESISLLELCRNTNRKQAAAKFYSFL K T G C R N 1 1 0 0 1 0 2 1 0 1 3 0 0 0 0 2 1 0 0 0 0 0 13 0 1447.7341 O60216 O60216 574 586 RAD21 Double-strand-break repair protein rad21 homolog yes yes 2 0.00072642 147.74 By MS/MS 4 0.816 1 1 1 3 578150 578150 0 13360 248 14150 34074;34075;34076 27225;27226;27227 27225 3 29611 0 TGAIIPELEREIR LYSDLADLMLRHGWRTGAIIPELEREIRII WRTGAIIPELEREIRIINTEQYMHSLTWQQ R T G I R I 1 2 0 0 0 0 3 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 13 1 1495.8358 Q9H857 Q9H857 375 387 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 3 0.020027 78.342 By MS/MS 6 0 1 1 1300700 1300700 0 13361 2472 14151 34077 27228 27228 1 8941.1 0 TGAIVDVPVGEELLGR FGNDKLIKEGDIVKRTGAIVDVPVGEELLG GAIVDVPVGEELLGRVVDALGNAIDGKGPI R T G G R V 1 1 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 16 0 1623.8832 P25705 P25705 134 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 4.7897E-17 265.53 By MS/MS By MS/MS 7 1.48 1 4 2 1 1 1 8 2 375300000 373930000 1368500 13362 723 14152 34078;34079;34080;34081;34082;34083;34084;34085;34086;34087 27229;27230;27231;27232;27233;27234;27235;27236;27237;27238;27239;27240;27241 27237 13 2652600 1441700 TGAVGDLVIIGDR LQTSVELCCGTHLLRTGAVGDLVIIGDRQL LRTGAVGDLVIIGDRQLSKGTTRLLAVTGE R T G D R Q 1 1 0 2 0 0 0 3 0 2 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1284.7038 Q5JTZ9 Q5JTZ9 757 769 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 8.0526E-06 197.73 By MS/MS 5.83 2.11 1 1 1 1 1 1 6 10091000 10091000 0 13363 1613 14153 34088;34089;34090;34091;34092;34093 27242;27243;27244;27245;27246 27242 5 749400 0 TGCIGAK VLGRPGFSIADKKRRTGCIGAKHRISKEEA SIADKKRRTGCIGAKHRISKEEAMRWFQQK R T G A K H 1 0 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 0 0 7 0 705.34796 P62913 P62913 148 154 RPL11 60S ribosomal protein L11 yes yes 2 0.041861 95.793 By MS/MS 9 0 1 1 1735600 1735600 0 13364 1186 14154 34094 27247 27247 1 34157 0 TGCNVLLIQK EERAYILNLVKQIKKTGCNVLLIQKSILRD KQIKKTGCNVLLIQKSILRDALSDLALHFL K T G Q K S 0 0 1 0 1 1 0 1 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1144.6274 P50991 P50991 293 302 CCT4 T-complex protein 1 subunit delta yes yes 2 6.6604E-11 219.54 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 69001000 69001000 0 13365 985 14155 34095;34096;34097;34098;34099;34100 27248;27249;27250;27251 27249 3 649860 0 TGEAIVDAALSALR FGSNKNRPEDYQGGRTGEAIVDAALSALRQ RTGEAIVDAALSALRQLVKDRLGGRSGGYS R T G L R Q 4 1 0 1 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1385.7514 Q15084 Q15084 119 132 PDIA6 Protein disulfide-isomerase A6 yes yes 2;3 0.00033142 184.44 By MS/MS 6 0 2 2 4967600 4967600 0 13366 1488 14156 34101;34102 27252;27253 27252 2 34149 0 TGEEDEEEFFCNR HFEPVVPLPDKIEVKTGEEDEEEFFCNRAK VKTGEEDEEEFFCNRAKLFRFDVESKEWKE K T G N R A 0 1 1 1 1 0 5 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 13 0 1660.6311 P49792 P49792 1186 1198 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 7.6999E-25 289.67 By MS/MS 1.5 0.5 1 1 2 354570 354570 0 13367 964 14157 34103;34104 27254 27254 1 104210 0 TGEEINFGK KDIIHFFRHREQKEKTGEEINFGKLITKPS REQKEKTGEEINFGKLITKPSEGTTLRVED K T G G K L 0 0 1 0 0 0 2 2 0 1 0 1 0 1 0 0 1 0 0 0 0 0 9 0 993.47673 P49959 P49959 408 416 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.0013554 134.77 By MS/MS 5 0 1 1 0 0 0 13368 970 14158 34105 27255 27255 1 0 0 TGEEVGFVVDAK SKCLATGPGIASTVKTGEEVGFVVDAKTAG TVKTGEEVGFVVDAKTAGKGKVTCTVLTPD K T G A K T 1 0 0 1 0 0 2 2 0 0 0 1 0 1 0 0 1 0 0 3 0 0 12 0 1249.619 O75369 O75369 1630 1641 FLNB Filamin-B yes yes 2 1.1296E-05 179.57 By MS/MS 1.5 0.5 1 1 2 223540 223540 0 13369 315 14159 34106;34107 27256;27257 27256 2 53866 0 TGEIQFSR IIGHDAGSWLKIDSRTGEIQFSREFDKKSK WLKIDSRTGEIQFSREFDKKSKYIINGIYT R T G S R E 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 8 0 936.46649 Q86SJ6 Q86SJ6 443 450 DSG4 Desmoglein-4 yes yes 2 0.0083944 126.24 By MS/MS 10 0 1 1 266420 0 266420 13370 1809 14160 34108 27258 27258 1 0 341090 TGEITASSNK GFQNNGFSVYINRNKTGEITASSNKSLNLL INRNKTGEITASSNKSLNLLKIKHGDLLFL K T G N K S 1 0 1 0 0 0 1 1 0 1 0 1 0 0 0 2 2 0 0 0 0 0 10 0 1006.4931 Q8TAT6 Q8TAT6 53 62 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 0.050182 72.243 By MS/MS 5 0 1 1 520150 520150 0 13371 1977 14161 34109 27259 27259 1 5216.8 0 TGENVEDAFLEAAK FAEENGLLFLEASAKTGENVEDAFLEAAKK KTGENVEDAFLEAAKKIYQNIQDGSLDLNA K T G A K K 3 0 1 1 0 0 3 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 14 0 1492.7046 P61106 P61106 157 170 RAB14 Ras-related protein Rab-14 yes yes 2 1.4831E-24 290.28 By MS/MS 8.5 0.5 1 1 2 1519400 1519400 0 13372 1110 14162 34110;34111 27260;27261 27260 2 22681 0 TGENVEDAFLEAAKK FAEENGLLFLEASAKTGENVEDAFLEAAKK TGENVEDAFLEAAKKIYQNIQDGSLDLNAA K T G K K I 3 0 1 1 0 0 3 1 0 0 1 2 0 1 0 0 1 0 0 1 0 0 15 1 1620.7995 P61106 P61106 157 171 RAB14 Ras-related protein Rab-14 yes yes 2;3 0.00028259 143.31 By MS/MS 8.33 0.471 2 1 3 4370200 4370200 0 13373 1110 14163 34112;34113;34114 27262;27263;27264 27262 3 60209 0 TGESQNQLAVDQIAFQK SIFVKLLKISGIILKTGESQNQLAVDQIAF ESQNQLAVDQIAFQKKLFQTLRRHPSYPKI K T G Q K K 2 0 1 1 0 4 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 17 0 1875.9327 Q9BXW9 Q9BXW9 61 77 FANCD2 Fanconi anemia group D2 protein yes yes 2 1.0537E-16 255.85 By MS/MS 3 0 1 1 381150 381150 0 13374 2362 14164 34115 27265 27265 1 6974 0 TGETGIEETILEGHLGVTK NEIDWLKRIRDDVKRTGETGIEETILEGHL GIEETILEGHLGVTKELLAFQTSEKKFHIG R T G T K E 0 0 0 0 0 0 4 4 1 2 2 1 0 0 0 0 4 0 0 1 0 0 19 0 1983.0161 Q93008 Q93008 1417 1435 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 9.0695E-05 170.78 By MS/MS 2 0.816 1 1 1 3 1072700 1072700 0 13375 2085 14165 34116;34117;34118 27266 27266 1 318050 0 TGFAEGFLK MKTKNIPEAHQDAFKTGFAEGFLKAQALTQ HQDAFKTGFAEGFLKAQALTQKTNDSLRRT K T G L K A 1 0 0 0 0 0 1 2 0 0 1 1 0 2 0 0 1 0 0 0 0 0 9 0 968.49673 Q96TA2 Q96TA2 270 278 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.0020347 120.87 By MS/MS 6 0 1 1 3115200 3115200 0 13376 2241 14166 34119 27267 27267 1 21415 0 TGFFEFQAAK TDQNYEKMMFKEALKTGFFEFQAAKDKYRE KEALKTGFFEFQAAKDKYRELAVEGMHREL K T G A K D 2 0 0 0 0 1 1 1 0 0 0 1 0 3 0 0 1 0 0 0 0 0 10 0 1144.5553 Q9P2J5 Q9P2J5 823 832 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.050087 77.533 By MS/MS 3 1.41 1 1 1 1 1 5 3361700 3361700 0 13377 2684 14167 34120;34121;34122;34123;34124 27268 27268 1 146680 0 TGFNMDDLQK TALIQIFPALYQHIKTGFNMDDLQKLGVIL YQHIKTGFNMDDLQKLGVILHSAISVPISS K T G Q K L 0 0 1 2 0 1 0 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 10 0 1167.523 Q7Z3U7 Q7Z3U7 1289 1298 MON2 Protein MON2 homolog yes yes 2 0.0012888 118.03 By MS/MS 2 0 1 1 267920 267920 0 13378 1787 14168 34125 27269 27269 1 90621 0 TGFNTSQGK GLKPVDSGCVAYVLRTGFNTSQGKLLRTIL VAYVLRTGFNTSQGKLLRTILFGVKRVTAN R T G G K L 0 0 1 0 0 1 0 2 0 0 0 1 0 1 0 1 2 0 0 0 0 0 9 0 938.44576 Q9HD20 Q9HD20 417 425 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0064478 106.68 By MS/MS 1.5 0.5 1 1 2 407180 407180 0 13379 2517 14169 34126;34127 27270 27270 1 122970 0 TGFQAVTGK QCETCHSRCSVASIKTGFQAVTGKRAQLRA SVASIKTGFQAVTGKRAQLRAKAN______ K T G G K R 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 2 0 0 1 0 0 9 0 907.47633 P20042 P20042 316 324 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.0021282 119.68 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 24707000 24580000 126910 13380 668 14170 34128;34129;34130;34131;34132;34133 27271;27272;27273 27271 3 202420 130050 TGGADQSLQQGEGSK YAAEMIPKLKTRTQKTGGADQSLQQGEGSK TGGADQSLQQGEGSKKGKGKKKK_______ K T G S K K 1 0 0 1 0 3 1 4 0 0 1 1 0 0 0 2 1 0 0 0 0 0 15 0 1461.6696 P09132 P09132 122 136 SRP19 Signal recognition particle 19 kDa protein yes yes 2 4.651E-24 284.92 By MS/MS 9.5 0.5 1 1 2 7976500 7976500 0 13381 533 14171 34134;34135 27274;27275 27275 2 385340 0 TGGADQSLQQGEGSKK YAAEMIPKLKTRTQKTGGADQSLQQGEGSK GGADQSLQQGEGSKKGKGKKKK________ K T G K K G 1 0 0 1 0 3 1 4 0 0 1 2 0 0 0 2 1 0 0 0 0 0 16 1 1589.7645 P09132 P09132 122 137 SRP19 Signal recognition particle 19 kDa protein yes yes 2;3 2.9164E-23 271.32 By MS/MS 9.67 0.471 1 2 3 2440100 2440100 0 13382 533 14172 34136;34137;34138 27276;27277 27277 2 116820 0 TGGADQSLQQGEGSKKGK YAAEMIPKLKTRTQKTGGADQSLQQGEGSK ADQSLQQGEGSKKGKGKKKK__________ K T G G K G 1 0 0 1 0 3 1 5 0 0 1 3 0 0 0 2 1 0 0 0 0 0 18 2 1774.881 P09132 P09132 122 139 SRP19 Signal recognition particle 19 kDa protein yes yes 3 0.000139 134.37 By MS/MS 10 0 1 1 488750 488750 0 13383 533 14173 34139 27278 27278 1 26342 0 TGGAYGEDLGADYNLSQVCDGK PKAKYHGNVMLLRAKTGGAYGEDLGADYNL DLGADYNLSQVCDGKVSVHVIEGDHRTLLE K T G G K V 2 0 1 3 1 1 1 5 0 0 2 1 0 0 0 1 1 0 2 1 0 0 22 0 2288.9856 P49327 P49327 2450 2471 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.0718E-13 230.57 By MS/MS 1.5 0.5 1 1 2 297080 297080 0 13384 946 14174 34140;34141 27279 27279 1 86498 0 TGGLEIDSDFGGFR IVAAVGLEPNVELAKTGGLEIDSDFGGFRV KTGGLEIDSDFGGFRVNAELQARSNIWVAG K T G F R V 0 1 0 2 0 0 1 4 0 1 1 0 0 2 0 1 1 0 0 0 0 0 14 0 1469.6787 O95831 O95831 409 422 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 3.6907E-11 236.22 By MS/MS 5.75 0.829 2 1 1 4 14250000 14250000 0 13385 429 14175 34142;34143;34144;34145 27280;27281;27282 27281 3 133600 0 TGGTQTDLFTCGK KNLTKEAIREHQMAKTGGTQTDLFTCGKCK AKTGGTQTDLFTCGKCKKKNCTYTQVQTRS K T G G K C 0 0 0 1 1 1 0 3 0 0 1 1 0 1 0 0 4 0 0 0 0 0 13 0 1384.6293 P23193;Q15560 P23193 253 265 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 2 1.8531E-11 232.56 By MS/MS 7 0 1 1 1335700 1335700 0 13386 699 14176 34146 27283 27283 1 20968 0 TGIDLGTTGR ASSASSFLDSDELERTGIDLGTTGRLQLMA DELERTGIDLGTTGRLQLMARLAEGTGLQI R T G G R L 0 1 0 1 0 0 0 3 0 1 1 0 0 0 0 0 3 0 0 0 0 0 10 0 989.51417 Q14498 Q14498 347 356 RBM39 RNA-binding protein 39 yes yes 2 0.0093589 95.775 By MS/MS 5 0 1 1 583190 583190 0 13387 1441 14177 34147 27284 27284 1 5849.1 0 TGIEQGSDAGYLCESQK KGLYPAPLKIIDVVKTGIEQGSDAGYLCES IEQGSDAGYLCESQKFGELVMTKESKALMG K T G Q K F 1 0 0 1 1 2 2 3 0 1 1 1 0 0 0 2 1 0 1 0 0 0 17 0 1841.8102 P40939 P40939 310 326 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 5.4559E-17 305.69 By MS/MS 5.75 0.829 2 1 1 4 18298000 18298000 0 13388 865 14178 34148;34149;34150;34151 27285;27286 27285 2 180710 0 TGILLYGPPGTGK AKYPELFANLPIRQRTGILLYGPPGTGKTL QRTGILLYGPPGTGKTLLAGVIARESRMNF R T G G K T 0 0 0 0 0 0 0 4 0 1 2 1 0 0 2 0 2 0 1 0 0 0 13 0 1272.7078 O43933 O43933 875 887 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0011902 122.69 By MS/MS 3 0 1 1 339490 339490 0 13389 247 14179 34152 27287 27287 1 6211.8 0 TGIYEEK EDYKLHFIFRHKNPKTGIYEEKHAKRPDAD IFRHKNPKTGIYEEKHAKRPDADLKTYFTD K T G E K H 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 838.40725 P27824 P27824 211 217 CANX Calnexin yes yes 2 0.030472 104.37 By MS/MS By matching 4 0 2 1 1 2938800 2911100 27666 13390 747 14180 34153;34154 27288 27288 1 273960 58947 TGKEYIPGQPPLSQSSDSSPTR AVECLLSLKAQYKEKTGKEYIPGQPPLSQS GQPPLSQSSDSSPTRNSEPAGLETPEAKVL K T G T R N 0 1 0 1 0 2 1 2 0 1 1 1 0 0 4 5 2 0 1 0 0 0 22 1 2331.1343 P07814 P07814 868 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.036271 57.188 By MS/MS 3.5 0.5 1 1 2 2227600 2227600 0 13391 512 14181 34155;34156 27289 27289 1 107420 0 TGLIDYNQLALTAR TSIFFESMPYKLNPKTGLIDYNQLALTARL KTGLIDYNQLALTARLFRPRLIIAGTSAYA K T G A R L 2 1 1 1 0 1 0 1 0 1 3 0 0 0 0 0 2 0 1 0 0 0 14 0 1547.8308 P34897 P34897 201 214 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 3.4768E-17 267.07 By MS/MS 6.5 0.5 1 1 2 8244700 8244700 0 13392 809 14182 34157;34158 27290 27290 1 58803 0 TGLLATLTR EQPKPLTKVAWCPTRTGLLATLTRDSNIIR AWCPTRTGLLATLTRDSNIIRLYDMQHTPT R T G T R D 1 1 0 0 0 0 0 1 0 0 3 0 0 0 0 0 3 0 0 0 0 0 9 0 944.56548 Q9NXC5 Q9NXC5 280 288 MIOS WD repeat-containing protein mio yes yes 2 6.7712E-05 168.25 By MS/MS 4 0 1 1 649840 649840 0 13393 2623 14183 34159 27291 27291 1 61155 0 TGLYNYYDDEKEK MVTRSYTVGVMMMHRTGLYNYYDDEKEKLQ HRTGLYNYYDDEKEKLQIVEMPLAHKLSSL R T G E K L 0 0 1 2 0 0 2 1 0 0 1 2 0 0 0 0 1 0 3 0 0 0 13 1 1636.7257 P50454 P50454 240 252 SERPINH1 Serpin H1 yes yes 3 0.0029928 104.41 By MS/MS 6.5 0.5 1 1 2 2833800 2833800 0 13394 975 14184 34160;34161 27292 27292 1 32115 0 TGNAWHSK KEDAIEHFMKLYEEKTGNAWHSKNFTKYPK MKLYEEKTGNAWHSKNFTKYPKKFYPLEID K T G S K N 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 8 0 899.42496 P09874 P09874 622 629 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.034204 88.496 By MS/MS 3.5 0.5 1 1 2 749460 749460 0 13395 543 14185 34162;34163 27293 27293 1 48897 0 TGNFQVTELGR ALMLDKNNLVKYDKKTGNFQVTELGRIASH YDKKTGNFQVTELGRIASHYYITNDTVQTY K T G G R I 0 1 1 0 0 1 1 2 0 0 1 0 0 1 0 0 2 0 0 1 0 0 11 0 1220.6149 O75643 O75643 976 986 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.1114E-13 244.16 By MS/MS 2 0.816 1 1 1 3 3752600 3752600 0 13396 340 14186 34164;34165;34166 27294;27295 27295 2 1074800 0 TGPNLHGLFGR KCSQCHTVEKGGKHKTGPNLHGLFGRKTGQ GKHKTGPNLHGLFGRKTGQAPGYSYTAANK K T G G R K 0 1 1 0 0 0 0 3 1 0 2 0 0 1 1 0 1 0 0 0 0 0 11 0 1167.6149 P99999;CON__P62894 P99999 29 39 CYCS Cytochrome c yes no 2 0.026472 82.261 By MS/MS 10 0 1 1 296870 296870 0 13397 1256 14187 34167 27296 27296 1 16000 0 TGPTQQQVEGR YTITKGPSKLVAQRRTGPTQQQVEGRLGEL AQRRTGPTQQQVEGRLGELLKCRQPAPPTS R T G G R L 0 1 0 0 0 3 1 2 0 0 0 0 0 0 1 0 2 0 0 1 0 0 11 0 1199.5895 Q9BUT9 Q9BUT9 17 27 FAM195A Protein FAM195A yes yes 2 1.2898E-06 187.16 By MS/MS 9.5 0.5 1 1 2 1120500 1120500 0 13398 2327 14188 34168;34169 27297 27297 1 26937 0 TGQAAELGGLLK VKEQSILELGSLLAKTGQAAELGGLLKYVR LAKTGQAAELGGLLKYVRPFLNSISKAKAA K T G L K Y 2 0 0 0 0 1 1 3 0 0 3 1 0 0 0 0 1 0 0 0 0 0 12 0 1156.6452 O00231 O00231 60 71 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.00016645 152.67 By MS/MS 7 0.816 1 1 1 3 15130000 15130000 0 13399 93 14189 34170;34171;34172 27298 27298 1 212000 0 TGQAPGYSYTAANK KHKTGPNLHGLFGRKTGQAPGYSYTAANKN KTGQAPGYSYTAANKNKGIIWGEDTLMEYL K T G N K N 3 0 1 0 0 1 0 2 0 0 0 1 0 0 1 1 2 0 2 0 0 0 14 0 1427.6681 P99999 P99999 41 54 CYCS Cytochrome c yes yes 2 0.00041436 137.95 By MS/MS 10 0 1 1 1024200 1024200 0 13400 1256 14190 34173 27299 27299 1 55201 0 TGQEVVFVAEPDNK ELTPHQTFVRLHNQKTGQEVVFVAEPDNKN KTGQEVVFVAEPDNKNVYKFELDTSERKIE K T G N K N 1 0 1 1 0 1 2 1 0 0 0 1 0 1 1 0 1 0 0 3 0 0 14 0 1531.7518 P04844 P04844 443 456 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 3.6212E-07 253.97 By MS/MS By MS/MS 4 1.85 1 1 1 2 2 5 2 4578100 4466200 111810 13401 479 14191 34174;34175;34176;34177;34178;34179;34180 27300;27301;27302;27303;27304;27305 27303 6 658450 107580 TGQGDYPLNNELDKEQEDVASTTR YQGLVVKQLVSQSKKTGQGDYPLNNELDKE NELDKEQEDVASTTRKELQELSSSIKDLVL K T G T R K 1 1 2 3 0 2 3 2 0 0 2 1 0 0 1 1 3 0 1 1 0 0 24 1 2679.226 O94874 O94874 746 769 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.035773 53.964 By MS/MS 4 0 1 1 936180 936180 0 13402 372 14192 34181 27306 27306 1 88101 0 TGQLFLK TTKPINGAIFIFNPRTGQLFLKIIHTSVWA AIFIFNPRTGQLFLKIIHTSVWAGQKRLGQ R T G L K I 0 0 0 0 0 1 0 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 7 0 805.46979 Q6P2Q9 Q6P2Q9 1814 1820 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.027749 106.42 By MS/MS 3.5 1.12 1 1 1 1 4 4093000 4093000 0 13403 1708 14193 34182;34183;34184;34185 27307 27307 1 718040 0 TGQSVDELFQK YADNIKAQLFETSSKTGQSVDELFQKVAED TSSKTGQSVDELFQKVAEDYVSVAAFQVMT K T G Q K V 0 0 0 1 0 2 1 1 0 0 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1250.6143 Q969Q5 Q969Q5 157 167 RAB24 Ras-related protein Rab-24 yes yes 2 9.9619E-06 173.24 By MS/MS By matching 9 0 2 1 1 644700 621030 23673 13404 2094 14194 34186;34187 27308 27308 1 12222 53983 TGQYSGIYDCAK IYPMEVMKTRLAVGKTGQYSGIYDCAKKIL VGKTGQYSGIYDCAKKILKHEGLGAFYKGY K T G A K K 1 0 0 1 1 1 0 2 0 1 0 1 0 0 0 1 1 0 2 0 0 0 12 0 1361.5922 Q6NUK1 Q6NUK1 321 332 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 1.6431E-08 208.33 By MS/MS 7 0 1 1 4702100 4702100 0 13405 1687 14195 34188 27309 27309 1 73815 0 TGQYSGIYDCAKK IYPMEVMKTRLAVGKTGQYSGIYDCAKKIL GKTGQYSGIYDCAKKILKHEGLGAFYKGYV K T G K K I 1 0 0 1 1 1 0 2 0 1 0 2 0 0 0 1 1 0 2 0 0 0 13 1 1489.6871 Q6NUK1 Q6NUK1 321 333 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2;3 0.0033581 125.72 By MS/MS 7 0 2 2 1761900 1761900 0 13406 1687 14196 34189;34190 27310;27311 27310 2 27658 0 TGSENDFVVLKK VEDYKSKYEDEINKRTGSENDFVVLKKDVD NKRTGSENDFVVLKKDVDAAYVSKVDLESR R T G K K D 0 0 1 1 0 0 1 1 0 0 1 2 0 1 0 1 1 0 0 2 0 0 12 1 1335.7034 CON__Q7Z794;Q7Z794 CON__Q7Z794 262 273 KRT77 Keratin, type II cytoskeletal 1b yes no 2 2.7057E-13 202.96 By matching By MS/MS 3 0 2 1 1 2013000 1358300 654710 + 13407 72 14197 34191;34192 27312 27312 1 24853 83334 TGSESSQTGTSTTSSR PSWRSEETQERERSRTGSESSQTGTSTTSS GSESSQTGTSTTSSRNARRRESEKSLENET R T G S R N 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 6 5 0 0 0 0 0 16 0 1572.6863 P23588 P23588 420 435 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 3.0152E-56 347.51 By MS/MS By MS/MS 6 1.22 1 2 2 2 1 4 4 5764900 5314000 450900 13408 708 14198 34193;34194;34195;34196;34197;34198;34199;34200 27313;27314;27315;27316;27317;27318;27319;27320 27318 8 58042 423020 TGSPGSPGAGGVQSTAK EGVLASFFNSLLSKKTGSPGSPGAGGVQST SPGSPGAGGVQSTAKKSGQKTVLSNVQEEL K T G A K K 2 0 0 0 0 1 0 5 0 0 0 1 0 0 2 3 2 0 0 1 0 0 17 0 1457.711 O43237 O43237 441 457 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 2 0.0012966 112.62 By MS/MS 6 0 1 1 1011400 1011400 0 13409 197 14199 34201 27321 27321 1 6952.6 0 TGSQGQCTQVR VQPIKLARVTKVLGRTGSQGQCTQVRVEFM VLGRTGSQGQCTQVRVEFMDDTSRSIIRNV R T G V R V 0 1 0 0 1 3 0 2 0 0 0 0 0 0 0 1 2 0 0 1 0 0 11 0 1220.5568 P62857 P62857 21 31 RPS28 40S ribosomal protein S28 yes yes 2 3.042E-13 236.92 By MS/MS By MS/MS 10 0 2 1 1 13901000 13703000 197250 13410 1178 14200 34202;34203 27322;27323 27323 2 738560 252530 TGSQGQCTQVRVEFMDDTSR VQPIKLARVTKVLGRTGSQGQCTQVRVEFM QCTQVRVEFMDDTSRSIIRNVKGPVREGDV R T G S R S 0 2 0 2 1 3 1 2 0 0 0 0 1 1 0 2 3 0 0 2 0 0 20 1 2301.0114 P62857 P62857 21 40 RPS28 40S ribosomal protein S28 yes yes 3 0.0222 66.702 By MS/MS 10 0 1 1 441780 441780 0 13411 1178 14201 34204 27324 27324 683 1 23811 0 TGSQYDIQDAIDK TGSDGSTRVVLVDRKTGSQYDIQDAIDKGL RKTGSQYDIQDAIDKGLVDRKFFDQYRSGS K T G D K G 1 0 0 3 0 2 0 1 0 2 0 1 0 0 0 1 1 0 1 0 0 0 13 0 1452.6733 P15924 P15924 2524 2536 DSP Desmoplakin yes yes 2 0.0080474 107.09 By MS/MS 1.5 0.5 1 1 2 344900 344900 0 13412 628 14202 34205;34206 27325;27326 27326 2 116660 0 TGTAEMSSILEER IAARNFHASNTHLQKTGTAEMSSILEERIL QKTGTAEMSSILEERILGADTSVDLEETGR K T G E R I 1 1 0 0 0 0 3 1 0 1 1 0 1 0 0 2 2 0 0 0 0 0 13 0 1422.6661 P25705 P25705 46 58 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.5512E-08 223.87 By MS/MS By MS/MS 7.25 1.48 4 1 1 1 1 6 2 31218000 30978000 239210 13413 723 14203;14204 34207;34208;34209;34210;34211;34212;34213;34214 27327;27328;27329;27330;27331 27331 361 5 259350 245120 TGTAYTFFTPNNIK EDYIHRIGRTARSTKTGTAYTFFTPNNIKQ KTGTAYTFFTPNNIKQVSDLISVLREANQA K T G I K Q 1 0 2 0 0 0 0 1 0 1 0 1 0 2 1 0 4 0 1 0 0 0 14 0 1573.7777 P17844 P17844 438 451 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 4.3568E-11 279.9 By MS/MS 5.5 0.5 1 1 2 2938000 2938000 0 13414 646 14205 34215;34216 27332 27332 1 28574 0 TGTCGYCGLQFR LGHPKVYINLDKETKTGTCGYCGLQFRQHH ETKTGTCGYCGLQFRQHHH___________ K T G F R Q 0 1 0 0 2 1 0 3 0 0 1 0 0 1 0 0 2 0 1 0 0 0 12 0 1418.6071 O75380 O75380 109 120 NDUFS6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes yes 2 0.0048463 104.01 By MS/MS 10 0 1 1 468260 468260 0 13415 318 14206 34217 27333 27333 1 25238 0 TGTITTFEHAHNMR GNIVGLVGVDQFLVKTGTITTFEHAHNMRV KTGTITTFEHAHNMRVMKFSVSPVVRVAVE K T G M R V 1 1 1 0 0 0 1 1 2 1 0 0 1 1 0 0 4 0 0 0 0 0 14 0 1614.7573 P13639 P13639 482 495 EEF2 Elongation factor 2 yes yes 2;3 0.00035996 172.61 By MS/MS 4.75 0.829 2 1 1 4 10558000 10558000 0 13416 602 14207 34218;34219;34220;34221 27334;27335 27334 2 674960 0 TGTIVVEGHELHDEDIR SIKQLSSEELEQFQKTGTIVVEGHELHDED TIVVEGHELHDEDIRLMYTFDQATGGTAQF K T G I R L 0 1 0 2 0 0 3 2 2 2 1 0 0 0 0 0 2 0 0 2 0 0 17 0 1918.9385 P41252 P41252 930 946 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.012268 85.837 By MS/MS 3 0 1 1 3279500 3279500 0 13417 871 14208 34222 27336 27336 1 60005 0 TGTLTQNR AVETLGSTSTICSDKTGTLTQNRMTVAHMW STICSDKTGTLTQNRMTVAHMWFDNQIHEA K T G N R M 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 8 0 889.46174 P05023;P13637;P50993;Q13733;P20648;P54707 P05023 378 385 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP4A;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Potassium-transporting ATPase alpha chain 2 no no 2 0.0023351 139.97 By MS/MS By matching 4.2 2.18 1 2 1 2 1 1 1 1 8 2 21999000 21909000 90568 13418 481;1046 14209 34223;34224;34225;34226;34227;34228;34229;34230;34231;34232 27337;27338;27339;27340;27341 27337 5 1520300 176100 TGTLTSDSLVVR RIPFAGKVEVCCFDKTGTLTSDSLVVRGVA FDKTGTLTSDSLVVRGVAGLRDGKEVTPVS K T G V R G 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 2 3 0 0 2 0 0 12 0 1247.6721 Q9HD20 Q9HD20 535 546 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0032425 108.7 By MS/MS 2 0.816 1 1 1 3 1427600 1427600 0 13419 2517 14210 34233;34234;34235 27342 27342 1 299500 0 TGTLTTNQMSVCR SVETLGCTSVICSDKTGTLTTNQMSVCRMF DKTGTLTTNQMSVCRMFILDRVEGDTCSLN K T G C R M 0 1 1 0 1 1 0 1 0 0 1 0 1 0 0 1 4 0 0 1 0 0 13 0 1467.681 P16615;Q93084 P16615 353 365 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 9.0529E-12 240.37 By MS/MS 2.78 1.31 2 2 2 2 1 9 5184300 5184300 0 13420 635 14211;14212 34236;34237;34238;34239;34240;34241;34242;34243;34244 27343;27344;27345;27346;27347 27344 314 5 1134500 0 TGTTGQSGAESGTTEPSAR PSTRRSSTTKPSVGRTGTTGQSGAESGTTE GQSGAESGTTEPSARVAGVTGTSAEVSGRI R T G A R V 2 1 0 0 0 1 2 4 0 0 0 0 0 0 1 3 5 0 0 0 0 0 19 0 1793.8028 Q7Z5P9 Q7Z5P9 2317 2335 MUC19 Mucin-19 yes yes 2 0.0186 84.169 By MS/MS 10 0 1 1 569430 0 569430 13421 1800 14213 34245 27348 27348 1 0 729030 TGTVSLEVR VFEDVVLHQATILPKTGTVSLEVRLLEASR ATILPKTGTVSLEVRLLEASRAFEVSENGN K T G V R L 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 2 0 0 9 0 960.52401 P49327 P49327 928 936 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.2898E-05 172.94 By MS/MS By MS/MS 2.83 1.34 1 2 1 1 1 5 1 41916000 41749000 167300 13422 946 14214 34246;34247;34248;34249;34250;34251 27349;27350;27351;27352;27353;27354 27352 6 8557300 236590 TGVAGSQPVSEK LGTDSAEPEMDVRKRTGVAGSQPVSEKQLA RKRTGVAGSQPVSEKQLAAELDLVLQRHQN R T G E K Q 1 0 0 0 0 1 1 2 0 0 0 1 0 0 1 2 1 0 0 2 0 0 12 0 1158.5881 Q9NZ43 Q9NZ43 141 152 USE1 Vesicle transport protein USE1 yes yes 2 0.00021214 147.28 By MS/MS 9 0.816 1 1 1 3 2345000 2345000 0 13423 2644 14215 34252;34253;34254 27355 27355 1 37863 0 TGVAVNKPAEFTVDAK FHPDRVKARGPGLEKTGVAVNKPAEFTVDA GVAVNKPAEFTVDAKHGGKAPLRVQVQDNE K T G A K H 3 0 1 1 0 0 1 1 0 0 0 2 0 1 1 0 2 0 0 3 0 0 16 1 1645.8675 P21333 P21333 685 700 FLNA Filamin-A yes yes 2;3 0.0025068 152 By MS/MS 2.14 0.99 2 3 1 1 7 6707300 6707300 0 13424 677 14216 34255;34256;34257;34258;34259;34260;34261 27356;27357;27358;27359;27360;27361 27361 6 1631300 0 TGVHHYSGNNIELGTACGK ALRKSEIEYYAMLAKTGVHHYSGNNIELGT HYSGNNIELGTACGKYYRVCTLAIIDPGDS K T G G K Y 1 0 2 0 1 0 1 4 2 1 1 1 0 0 0 1 2 0 1 1 0 0 19 0 2013.9327 P62888 P62888 69 87 RPL30 60S ribosomal protein L30 yes yes 3;4 0.00047258 111.73 By MS/MS 10 0 2 2 1601700 1601700 0 13425 1182 14217 34262;34263 27362;27363 27362 2 86327 0 TGVIGVQPEEVTAAAK HPSLVADVHQYFYRRTGVIGVQPEEVTAAA GVIGVQPEEVTAAAKKAVMDNRLHKCLLCG R T G A K K 3 0 0 0 0 1 2 2 0 1 0 1 0 0 1 0 2 0 0 3 0 0 16 0 1568.841 Q96JH7 Q96JH7 443 458 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0010756 138.02 By MS/MS 3 0 1 1 594050 594050 0 13426 2179 14218 34264 27364 27364 1 10869 0 TGVQTFR NSEDKSIRVWDMSKRTGVQTFRRDHDRFWV RVWDMSKRTGVQTFRRDHDRFWVLAAHPNL R T G F R R 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 7 0 807.4239 P53621 P53621 282 288 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0068404 148.04 By MS/MS 2 0.816 1 1 1 3 2723900 2723900 0 13427 1034 14219 34265;34266;34267 27365;27366;27367 27367 3 229690 0 TGVSQLSTALK GTDTMLGQPLQLLPKTGVSQLSTALKVAST LLPKTGVSQLSTALKVASTRLLQILAITTG K T G L K V 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 2 2 0 0 1 0 0 11 0 1103.6186 Q15751 Q15751 1802 1812 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 9.822E-05 152.04 By MS/MS 2.5 0.5 1 1 2 271230 271230 0 13428 1529 14220 34268;34269 27368 27368 1 74285 0 TGVTEWLEPLEAK YRELKFLLVLADGLRTGVTEWLEPLEAKSA LRTGVTEWLEPLEAKSAVELVQEFLNDLNK R T G A K S 1 0 0 0 0 0 3 1 0 0 2 1 0 0 1 0 2 1 0 1 0 0 13 0 1471.7559 Q9H900 Q9H900 281 293 ZWILCH Protein zwilch homolog yes yes 2 3.1668E-05 180.88 By MS/MS 5 0 1 1 211870 211870 0 13429 2477 14221 34270 27369 27369 1 2125 0 TGVVPQLVK YLTDGPNERIGMVVKTGVVPQLVKLLGASE IGMVVKTGVVPQLVKLLGASELPIVTPALR K T G V K L 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 3 0 0 9 0 939.57532 P52292 P52292 292 300 KPNA2 Importin subunit alpha-1 yes yes 2 0.047122 78.149 By MS/MS 7 0.816 1 1 1 3 5304200 5304200 0 13430 1013 14222 34271;34272;34273 27370 27370 1 43735 0 TGYESGEYEMLGEGLGVK TKGLDFSDRIGKTKRTGYESGEYEMLGEGL ESGEYEMLGEGLGVKETPQQKYQRLLHEVQ R T G V K E 0 0 0 0 0 0 4 5 0 0 2 1 1 0 0 1 1 0 2 1 0 0 18 0 1917.8666 Q13561 Q13561 79 96 DCTN2 Dynactin subunit 2 yes yes 2 0.0047779 94.547 By MS/MS 6 0 1 1 1503900 1503900 0 13431 1397 14223 34274 27371 27371 0 10338 0 TGYFSSTDLGR GRKLDKAQMIRFEERTGYFSSTDLGRTASH FEERTGYFSSTDLGRTASHYYIKYNTIETF R T G G R T 0 1 0 1 0 0 0 2 0 0 1 0 0 1 0 2 2 0 1 0 0 0 11 0 1202.5568 Q8N3C0 Q8N3C0 973 983 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.00066088 128.35 By MS/MS 1.5 0.5 1 1 2 832970 832970 0 13432 1911 14224 34275;34276 27372;27373 27372 2 244170 0 TGYSAILEFK MTLELGGTVNITCQKTGYSAILEFKLKPFL ITCQKTGYSAILEFKLKPFLGSSDCVNQIS K T G F K L 1 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1127.5863 Q9BZF1 Q9BZF1 598 607 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 0.0052008 112.11 By MS/MS 4 0 1 1 1312700 1312700 0 13433 2377 14225 34277 27374 27374 1 123540 0 TGYSFVNCK ASASSKELLMKLRRKTGYSFVNCKKALETC MKLRRKTGYSFVNCKKALETCGGDLKQAEI K T G C K K 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 1 1 0 1 1 0 0 9 0 1074.4804 P43897 P43897 57 65 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.00025866 154.12 By MS/MS 8 0 1 1 4427000 4427000 0 13434 901 14226 34278 27375 27375 1 55891 0 TGYTLDVTTGQR SKGPDEAKIKALLERTGYTLDVTTGQRKYG LERTGYTLDVTTGQRKYGGPPPDSVYSGQQ R T G Q R K 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 4 0 1 1 0 0 12 0 1310.6466 O43390;O60506 O60506 131 142 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.00012986 155.06 By MS/MS 5.5 0.5 1 1 2 2572400 2572400 0 13435 205;261 14227 34279;34280 27376 27376 1 23864 0 TGYTPDEKLR ______________________________ ______________________________ M T G L R L 0 1 0 1 0 0 1 1 0 0 1 1 0 0 1 0 2 0 1 0 0 0 10 1 1178.5932 O95139 O95139 2 11 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes yes 2 0.00063003 152.06 By MS/MS By matching 9.25 0.433 3 1 3 1 8262700 8232400 30330 13436 385 14228;14229 34281;34282;34283;34284 27377;27378 27377 2 172610 69161 THEAEIVEGENHTYCIR SIQDMTAQVTSPSGKTHEAEIVEGENHTYC EAEIVEGENHTYCIRFVPAEMGTHTVSVKY K T H I R F 1 1 1 0 1 0 4 1 2 2 0 0 0 0 0 0 2 0 1 1 0 0 17 0 2056.9273 P21333 P21333 2185 2201 FLNA Filamin-A yes yes 3 0.00020501 134.81 By MS/MS 1.5 0.5 1 1 2 1030600 1030600 0 13437 677 14230 34285;34286 27379;27380 27379 2 313680 0 THFGGGK MYKTTPDVIFVFGFRTHFGGGKTTGFGMIY VIFVFGFRTHFGGGKTTGFGMIYDSLDYAK R T H G K T 0 0 0 0 0 0 0 3 1 0 0 1 0 1 0 0 1 0 0 0 0 0 7 0 702.34492 P62847 P62847 62 68 RPS24 40S ribosomal protein S24 yes yes 2 0.018013 114.59 By MS/MS 10 0 1 1 3434100 3434100 0 13438 1175 14231 34287 27381 27381 1 185090 0 THFNKGPSYGLSAEVK ______________________________ HFNKGPSYGLSAEVKNKIASKYDHQAEEDL M T H V K N 1 0 1 0 0 0 1 2 1 0 1 2 0 1 1 2 1 0 1 1 0 0 16 1 1733.8737 Q15417 Q15417 2 17 CNN3 Calponin-3 yes yes 3 0.0018248 95.347 By MS/MS 7 0 1 1 924340 924340 0 13439 1510 14232 34288 27382 27382 1 14510 0 THHNDTELIR ESASLVASGKAELIKTHHNDTELIRKLREE AELIKTHHNDTELIRKLREEGKVIEPLKDF K T H I R K 0 1 1 1 0 0 1 0 2 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1234.6054 P49915 P49915 390 399 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 3 0.04273 85.963 By MS/MS 5 0 1 1 504060 504060 0 13440 968 14233 34289 27383 27383 1 5055.5 0 THIDVIHYR IRVNPRVSNVKSVYKTHIDVIHYRKTDAKR VKSVYKTHIDVIHYRKTDAKRLHGLDEEAE K T H Y R K 0 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 1 0 0 9 0 1152.604 P33991 P33991 414 422 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0089127 99.688 By MS/MS 4.5 0.5 1 1 2 1750300 1750300 0 13441 806 14234 34290;34291 27384 27384 1 144980 0 THINIVVIGHVDSGK ______________________________ THINIVVIGHVDSGKSTTTGHLIYKCGGID K T H G K S 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 1 0 0 3 0 0 15 0 1587.8733 Q5VTE0;P68104;Q05639 Q5VTE0 6 20 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 3 0.018678 82.59 By MS/MS 7 0 1 1 939410 939410 0 13442 1209 14235 34292 27385 27385 1 14747 0 THINYGVK YICRNFTGSSALLTRTHINYGVKGDVAVVR SSALLTRTHINYGVKGDVAVVRINSPNSKV R T H V K G 0 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 1 1 0 0 8 0 930.49232 P40939 P40939 39 46 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.044052 72.789 By MS/MS 5 0 1 1 3450400 3450400 0 13443 865 14236 34293 27386 27386 1 34606 0 THLENNR ELDIMEPKVPDDIYKTHLENNRFGGSGSQV KVPDDIYKTHLENNRFGGSGSQVDSARMNL K T H N R F 0 1 2 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 882.43078 Q13200 Q13200 351 357 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.012205 129.68 By MS/MS 4 0 1 1 1106500 1106500 0 13444 1365 14237 34294 27387 27387 1 104130 0 THLTEDTPK MEPAVSEPMRDQVARTHLTEDTPKVNADIE RDQVARTHLTEDTPKVNADIEKVNQNQAKR R T H P K V 0 0 0 1 0 0 1 0 1 0 1 1 0 0 1 0 3 0 0 0 0 0 9 0 1040.5138 Q15738 Q15738 16 24 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.0071098 105.52 By MS/MS 7 0 1 1 2835300 2835300 0 13445 1526 14238 34295 27388 27388 1 44510 0 THLTEDTPKVNADIEK MEPAVSEPMRDQVARTHLTEDTPKVNADIE HLTEDTPKVNADIEKVNQNQAKRCTVIGGS R T H E K V 1 0 1 2 0 0 2 0 1 1 1 2 0 0 1 0 3 0 0 1 0 0 16 1 1809.9109 Q15738 Q15738 16 31 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.003282 101.2 By MS/MS 7 0 1 1 2788300 2788300 0 13446 1526 14239 34296 27389 27389 1 43771 0 THLTEDTPKVNADIEKVNQNQAK MEPAVSEPMRDQVARTHLTEDTPKVNADIE KVNADIEKVNQNQAKRCTVIGGSGFLGQHM R T H A K R 2 0 3 2 0 2 2 0 1 1 1 3 0 0 1 0 3 0 0 2 0 0 23 2 2592.3144 Q15738 Q15738 16 38 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 4 0.0037785 68.625 By MS/MS 7 0 1 1 1608900 1608900 0 13447 1526 14240 34297 27390;27391 27390 2 25256 0 THSDQFLVAFK MLVGIGDKIRGILYRTHSDQFLVAFKEVGR ILYRTHSDQFLVAFKEVGRKPPTFGDASVI R T H F K E 1 0 0 1 0 1 0 0 1 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1291.6561 P36542 P36542 144 154 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2;3 3.2548E-09 212.03 By MS/MS 8.5 0.866 1 3 3 1 8 62728000 62728000 0 13448 835 14241 34298;34299;34300;34301;34302;34303;34304;34305 27392;27393;27394;27395;27396;27397 27392 6 813670 0 THSDQFLVAFKEVGR MLVGIGDKIRGILYRTHSDQFLVAFKEVGR THSDQFLVAFKEVGRKPPTFGDASVIALEL R T H G R K 1 1 0 1 0 1 1 1 1 0 1 1 0 2 0 1 1 0 0 2 0 0 15 1 1732.8897 P36542 P36542 144 158 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 3 0.00106 112.96 By MS/MS 8 0 1 1 1211500 1211500 0 13449 835 14242 34306 27398 27398 1 15295 0 THTDTESEASILGDSGEYK LRVCFGMLPKSKTSKTHTDTESEASILGDS TESEASILGDSGEYKMILVVRNDLKMGKGK K T H Y K M 1 0 0 2 0 0 3 2 1 1 1 1 0 0 0 3 3 0 1 0 0 0 19 0 2038.8967 Q9Y3E5 Q9Y3E5 48 66 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 2 6.3735E-45 324.81 By MS/MS 9.5 0.5 1 1 2 1308200 1308200 0 13450 2876 14243 34307;34308 27399 27399 1 37330 0 THTYECR HVCNLCGIMAIANTRTHTYECRGCRNKTQI IMAIANTRTHTYECRGCRNKTQISLVRMPY R T H C R G 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 2 0 1 0 0 0 7 0 965.40251 P30876 P30876 1132 1138 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.040164 97.071 By MS/MS 3 0 1 1 241440 241440 0 13451 781 14244 34309 27400 27400 1 4417.7 0 THYQADIER GLVTDAFKLKRKELKTHYQADIERMYGRK_ KRKELKTHYQADIERMYGRK__________ K T H E R M 1 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1131.5309 O95573 O95573 707 715 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.0055497 138.08 By MS/MS 5 0 1 1 2021600 2021600 0 13452 417 14245 34310 27401 27401 1 20276 0 TIAECLADELINAAK LLCTGAREAAFRNIKTIAECLADELINAAK TIAECLADELINAAKGSSNSYAIKKKDELE K T I A K G 4 0 1 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1630.8236 P46782 P46782 168 182 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2;3 4.9264E-12 272.1 By MS/MS 9.33 0.471 2 1 3 1524700 1524700 0 13453 919 14246 34311;34312;34313 27402;27403 27402 2 35060 0 TIAIIAEGIPEALTR AYDSTMETMNYAQIRTIAIIAEGIPEALTR TIAIIAEGIPEALTRKLIKKADQKGVTIIG R T I T R K 3 1 0 0 0 0 2 1 0 4 1 0 0 0 1 0 2 0 0 0 0 0 15 0 1566.8981 P53396 P53396 593 607 ACLY ATP-citrate synthase yes yes 2;3 2.1993E-08 276.95 By MS/MS 4.75 0.829 2 1 1 4 6814200 6814200 0 13454 1030 14247 34314;34315;34316;34317 27404;27405;27406;27407;27408 27404 5 494590 0 TIALNGVEDVR NSDDRVLLDLSAFLKTIALNGVEDVRTVLE AFLKTIALNGVEDVRTVLEHYALEDDPLAA K T I V R T 1 1 1 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1185.6354 Q3ZCQ8 Q3ZCQ8 285 295 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 2.387E-09 215.72 By MS/MS By MS/MS 8 1.22 2 1 1 3 1 29740000 29665000 74275 13455 1580 14248 34318;34319;34320;34321 27409;27410;27411;27412 27412 4 738600 133770 TIAMDGTEGLVR LVLEVAQHLGESTVRTIAMDGTEGLVRGQK TVRTIAMDGTEGLVRGQKVLDSGAPIKIPV R T I V R G 1 1 0 1 0 0 1 2 0 1 1 0 1 0 0 0 2 0 0 1 0 0 12 0 1261.6336 P06576 P06576 110 121 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.3195E-05 178.84 By MS/MS By MS/MS 7.14 1.25 6 3 3 1 1 12 2 58888000 58312000 576360 13456 497 14249;14250 34322;34323;34324;34325;34326;34327;34328;34329;34330;34331;34332;34333;34334;34335 27413;27414;27415;27416;27417;27418;27419;27420;27421;27422 27415 202 10 472100 590600 TIAQAVYGAK QFLYDVQVPIVDKIRTIAQAVYGAKDIELS VDKIRTIAQAVYGAKDIELSPEAQAKIDRY R T I A K D 3 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1020.5604 Q6UB35 Q6UB35 871 880 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 3.7565E-06 172.59 By MS/MS By MS/MS 4 0.707 1 2 1 3 1 21885000 21487000 398810 13457 1728 14251 34336;34337;34338;34339 27423;27424 27424 2 1936900 849730 TIAQDYGVLK GLGPMNIPLVSDPKRTIAQDYGVLKADEGI SDPKRTIAQDYGVLKADEGISFRGLFIIDD R T I L K A 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1106.5972 Q06830 Q06830 111 120 PRDX1 Peroxiredoxin-1 yes yes 2 0.00023653 144.65 By MS/MS By matching 9 0.707 1 2 1 3 1 8646100 8571100 75027 13458 1297 14252 34340;34341;34342;34343 27425;27426;27427 27426 3 166140 171090 TIAQGNLSNTDVQAAK TAAGDVIKAAYNQVKTIAQGNLSNTDVQAA IAQGNLSNTDVQAAKNKLKAGYLMSVESSE K T I A K N 3 0 2 1 0 2 0 1 0 1 1 1 0 0 0 1 2 0 0 1 0 0 16 0 1629.8322 P22695 P22695 360 375 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 4.1134E-33 304.08 By MS/MS By MS/MS 7 0 2 1 1 15883000 15788000 95029 13459 696 14253 34344;34345 27428;27429;27430 27430 3 247840 171140 TIATSQNR YIKLRKIRAAQNISKTIATSQNRIYLTADN AAQNISKTIATSQNRIYLTADNLVLNLQDE K T I N R I 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 8 0 889.46174 Q99623 Q99623 263 270 PHB2 Prohibitin-2 yes yes 2 0.0026677 136.75 By MS/MS By matching 8.17 1.07 2 2 1 1 4 2 52122000 51705000 417210 13460 2254 14254 34346;34347;34348;34349;34350;34351 27431;27432 27432 2 739210 672350 TIAVDFASEDIYDK QVSSEIKEKFKVETRTIAVDFASEDIYDKI RTIAVDFASEDIYDKIKTGLAGLEIGILVN R T I D K I 2 0 0 3 0 0 1 0 0 2 0 1 0 1 0 1 1 0 1 1 0 0 14 0 1585.7512 Q53GQ0 Q53GQ0 104 117 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 9.4756E-17 260.6 By MS/MS 8 0 1 1 2100000 2100000 0 13461 1587 14255 34352 27433 27433 1 26512 0 TIAVDFASEDIYDKIK QVSSEIKEKFKVETRTIAVDFASEDIYDKI IAVDFASEDIYDKIKTGLAGLEIGILVNNV R T I I K T 2 0 0 3 0 0 1 0 0 3 0 2 0 1 0 1 1 0 1 1 0 0 16 1 1826.9302 Q53GQ0 Q53GQ0 104 119 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.00045513 187.62 By MS/MS 8 0 1 1 1956900 1956900 0 13462 1587 14256 34353 27434 27434 1 24706 0 TICAEFAILR SDDNVFVGAPTGSGKTICAEFAILRMLLQS TGSGKTICAEFAILRMLLQSSEGRCVYITP K T I L R M 2 1 0 0 1 0 1 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1192.6274 O75643 O75643 1357 1366 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.030077 81.95 By MS/MS 2 0 1 1 68303 68303 0 13463 340 14257 34354 27435 27435 1 23103 0 TICAILENYQTEK EFVHMLNATMCATTRTICAILENYQTEKGI TRTICAILENYQTEKGITVPEKLKEFMPPG R T I E K G 1 0 1 0 1 1 2 0 0 2 1 1 0 0 0 0 2 0 1 0 0 0 13 0 1581.7709 P49591 P49591 436 448 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 1.8531E-11 232.56 By MS/MS 6 0 1 1 1120100 1120100 0 13464 952 14258 34355 27436 27436 1 7699.6 0 TICSHVQNMIK VDKWWGNRKELATVRTICSHVQNMIKGVTL ATVRTICSHVQNMIKGVTLGFRYKMRSVYA R T I I K G 0 0 1 0 1 1 0 0 1 2 0 1 1 0 0 1 1 0 0 1 0 0 11 0 1329.6533 P32969 P32969 72 82 RPL9 60S ribosomal protein L9 yes yes 2 0.025616 82.261 By MS/MS 9 0 1 1 478940 478940 0 13465 798 14259 34356 27437 27437 396 1 9425.6 0 TIDGILLLIER LFRAHIISDQKVQNKTIDGILLLIERERNG VQNKTIDGILLLIERERNGEAIDRSLLRSL K T I E R E 0 1 0 1 0 0 1 1 0 3 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1254.7547 Q13620;Q13619 Q13620 346 356 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.0049414 117.02 By MS/MS 4 0 1 1 0 0 0 13466 1405 14260 34357 27438 27438 1 0 0 TIDQIHK RGSNWVPRRGDQGPKTIDQIHKEAEMEEHR RRGDQGPKTIDQIHKEAEMEEHREHIKVQQ K T I H K E 0 0 0 1 0 1 0 0 1 2 0 1 0 0 0 0 1 0 0 0 0 0 7 0 853.46577 Q04637 Q04637 1001 1007 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.038374 98.418 By MS/MS 3 1.41 1 1 1 1 1 5 9457900 9457900 0 13467 1291 14261 34358;34359;34360;34361;34362 27439 27439 1 2770700 0 TIEAEAAHGTVTR SLGLMTSVLVCPDGKTIEAEAAHGTVTRHY GKTIEAEAAHGTVTRHYREHQKGRPTSTNP K T I T R H 3 1 0 0 0 0 2 1 1 1 0 0 0 0 0 0 3 0 0 1 0 0 13 0 1354.6841 P48735 P48735 341 353 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.00011511 171.92 By MS/MS 7 0 1 1 1570700 1570700 0 13468 942 14262 34363 27440 27440 1 24657 0 TIEALMDR LKAMQRPETAATLKRTIEALMDRGAIVRDL TAATLKRTIEALMDRGAIVRDLENLGERAL R T I D R G 1 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 8 0 947.47462 P82932 P82932 25 32 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.0053054 124.08 By MS/MS 10 0 2 2 2196800 2196800 0 13469 1238 14263;14264 34364;34365 27441;27442 27442 746 2 118400 0 TIECISLIGLAVGK VENAVQKELRLLRGKTIECISLIGLAVGKE KTIECISLIGLAVGKEKFMQDASDVMQLLL K T I G K E 1 0 0 0 1 0 1 2 0 3 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1472.8273 O00410 O00410 557 570 IPO5 Importin-5 yes yes 2 5.1539E-11 231.42 By MS/MS 4 0 1 1 181470 181470 0 13470 103 14265 34366 27443 27443 1 17078 0 TIEDDLVSALVR GYHGMQRNVGSSQFKTIEDDLVSALVRSGC QFKTIEDDLVSALVRSGCIPENHGEDMRKM K T I V R S 1 1 0 2 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 2 0 0 12 0 1329.714 Q9Y606 Q9Y606 111 122 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 1.1303E-08 213.8 By MS/MS 7 0 1 1 615310 615310 0 13471 2929 14266 34367 27444 27444 1 9659.2 0 TIEELQQK QQEPLLCPSYQSYFKTIEELQQKILCSKSE SYQSYFKTIEELQQKILCSKSENARLVVQI K T I Q K I 0 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 987.52368 CON__O76011;CON__Q8IUT8;O76011;CON__Q14525;Q14525;CON__Q9UE12;CON__Q15323;Q15323;CON__Q6NTB9;CON__O76009;O76009;Q14532 CON__Q14525 109 116 KRT34;KRT33B;KRT31;KRT33A;KRT32 Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha2 no no 2 0.001625 153.04 By MS/MS 10 0 1 1 398810 0 398810 + 13472 59;36;61 14267 34368 27445 27445 1 0 510590 TIEESEETLKNTK SSYHKQQEELDALKKTIEESEETLKNTKEI KKTIEESEETLKNTKEIQRKAEEKYEVLEN K T I T K E 0 0 1 0 0 0 4 0 0 1 1 2 0 0 0 1 3 0 0 0 0 0 13 1 1520.757 O95347 O95347 751 763 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00058073 171.67 By MS/MS 3.5 0.5 1 1 2 799330 799330 0 13473 405 14268 34369;34370 27446 27446 1 31996 0 TIEKFEKEAAEMGK TTGHLIYKCGGIDKRTIEKFEKEAAEMGKG RTIEKFEKEAAEMGKGSFKYAWVLDKLKAE R T I G K G 2 0 0 0 0 0 4 1 0 1 0 3 1 1 0 0 1 0 0 0 0 0 14 2 1609.8022 Q5VTE0;P68104;Q05639 Q5VTE0 38 51 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 0.00031697 196.7 By MS/MS 6.67 0.471 1 2 3 6094100 6094100 0 13474 1209 14269 34371;34372;34373 27447;27448 27448 2 78060 0 TIELDGKTIK TESYISTIGVDFKIRTIELDGKTIKLQIWD DFKIRTIELDGKTIKLQIWDTAGQERFRTI R T I I K L 0 0 0 1 0 0 1 1 0 2 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1116.639 P62820;Q9H0U4 P62820 52 61 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 2;3 0.0059225 106.88 By MS/MS 8.67 0.471 1 2 3 1471800 1471800 0 13475 1171;2416 14270 34374;34375;34376 27449;27450 27449 2 24442 0 TIEQIHK RLCNWVSRRADQGPKTIEQIHKEAKIEEQE RRADQGPKTIEQIHKEAKIEEQEEQRKVQQ K T I H K E 0 0 0 0 0 1 1 0 1 2 0 1 0 0 0 0 1 0 0 0 0 0 7 0 867.48142 O43432 O43432 995 1001 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.025527 108.09 By MS/MS 2 0 1 1 661670 661670 0 13476 210 14271 34377 27451 27451 1 223810 0 TIEQNINNLNVSEADR TTKKAVKPKKKHLHRTIEQNINNLNVSEAD IEQNINNLNVSEADRKCEIDPMFQKTAASF R T I D R K 1 1 4 1 0 1 2 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1828.8915 Q15003 Q15003 222 237 NCAPH Condensin complex subunit 2 yes yes 2 1.5141E-16 254.1 By MS/MS 4 0 1 1 877200 877200 0 13477 1468 14272 34378 27452 27452 1 82550 0 TIEQNINNLNVSEADRK TTKKAVKPKKKHLHRTIEQNINNLNVSEAD EQNINNLNVSEADRKCEIDPMFQKTAASFD R T I R K C 1 1 4 1 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 1 0 0 17 1 1956.9865 Q15003 Q15003 222 238 NCAPH Condensin complex subunit 2 yes yes 3 0.039918 65.528 By MS/MS 4 0 1 1 0 0 0 13478 1468 14273 34379 27453 27453 1 0 0 TIESANQQTDK AYCEYRLNRIENALKTIESANQQTDKLKEL NALKTIESANQQTDKLKELYGQVLYRLERY K T I D K L 1 0 1 1 0 2 1 0 0 1 0 1 0 0 0 1 2 0 0 0 0 0 11 0 1233.5837 O76094 O76094 100 110 SRP72 Signal recognition particle subunit SRP72 yes yes 2 5.3668E-13 228.2 By MS/MS 5 0 1 1 850030 850030 0 13479 362 14274 34380 27454 27454 1 8525.4 0 TIESANQQTDKLK AYCEYRLNRIENALKTIESANQQTDKLKEL LKTIESANQQTDKLKELYGQVLYRLERYDE K T I L K E 1 0 1 1 0 2 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 13 1 1474.7627 O76094 O76094 100 112 SRP72 Signal recognition particle subunit SRP72 yes yes 2 6.6167E-07 201.09 By MS/MS 5 0 1 1 851150 851150 0 13480 362 14275 34381 27455 27455 1 8536.6 0 TIESETVR LEESDVLQEARRKYKTIESETVRTSEVLRK EARRKYKTIESETVRTSEVLRKKLGELTGT K T I V R T 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 2 0 0 1 0 0 8 0 933.47673 O43615 O43615 106 113 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0023228 140.09 By MS/MS 7 0 1 1 7352800 7352800 0 13481 221 14276 34382 27456 27456 1 115430 0 TIETSPSLSR ILMDSYGPKKVLDGKTIETSPSLSRMPNQH VLDGKTIETSPSLSRMPNQHACKLGANILL K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 Q9NVI1 Q9NVI1 403 412 FANCI Fanconi anemia group I protein yes yes 2 0.010303 93.649 By MS/MS By matching 3 0 2 1 1 806750 628830 177910 13482 2597 14277 34383;34384 27457 27457 1 11506 22646 TIEVLQLQDQGSK SLSIKVEESYAMPTKTIEVLQLQDQGSKML TKTIEVLQLQDQGSKMLLDSVLTTHERVVQ K T I S K M 0 0 0 1 0 3 1 1 0 1 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1457.7726 Q96GC5 Q96GC5 131 143 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2 5.6746E-33 294.49 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 8433100 8370100 62978 13483 2158 14278 34385;34386;34387 27458;27459;27460 27460 3 168490 143610 TIEYLEEVAITFAK LVEPLGPGLKPPEERTIEYLEEVAITFAKG RTIEYLEEVAITFAKGLADKKISPKRDKGL R T I A K G 2 0 0 0 0 0 3 0 0 2 1 1 0 1 0 0 2 0 1 1 0 0 14 0 1625.8552 P40939 P40939 236 249 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 4.6159E-05 188.96 By MS/MS 5 0 1 1 49288 49288 0 13484 865 14279 34388 27461 27461 1 494.33 0 TIEYLQPNPASR KVDVTSRAVMEIMTKTIEYLQPNPASRAKL MTKTIEYLQPNPASRAKLSMINTMSKIRGQ K T I S R A 1 1 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 0 1 0 0 0 12 0 1387.7096 Q99962;Q99961 Q99962 54 65 SH3GL2;SH3GL1 Endophilin-A1;Endophilin-A2 yes no 2 0.00073987 130.01 By MS/MS 7 0 1 1 1448400 1448400 0 13485 2275 14280 34389 27462;27463 27462 2 22737 0 TIFQGIAAK SLMPGGNKEAWPHIKTIFQGIAAKVGTGEP AWPHIKTIFQGIAAKVGTGEPCCDWVGDEG K T I A K V 2 0 0 0 0 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 9 0 947.54402 P52209 P52209 155 163 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.00038098 150.36 By MS/MS 6 0.816 1 1 1 3 11913000 11913000 0 13486 1011 14281 34390;34391;34392 27464;27465 27464 2 110790 0 TIGGGDDSFNTFFSETGAGK LEHGIQPDGQMPSDKTIGGGDDSFNTFFSE DDSFNTFFSETGAGKHVPRAVFVDLEPTVI K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 41 60 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2;3 1.0249E-35 308.03 By MS/MS By MS/MS 5.67 2.36 1 1 1 1 1 6 1 1 1 1 14 1 627470000 626970000 503340 13487 1210;1751;2290 14282 34393;34394;34395;34396;34397;34398;34399;34400;34401;34402;34403;34404;34405;34406;34407 27466;27467;27468;27469;27470;27471;27472;27473;27474;27475;27476;27477;27478;27479;27480;27481;27482;27483;27484;27485;27486;27487;27488;27489;27490;27491 27473 26 4633900 515780 TIGGGDDSFNTFFSETGAGKHVPR LEHGIQPDGQMPSDKTIGGGDDSFNTFFSE NTFFSETGAGKHVPRAVFVDLEPTVIDEVR K T I P R A 1 1 1 2 0 0 1 5 1 1 0 1 0 3 1 2 3 0 0 1 0 0 24 1 2496.167 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q9BQE3 41 64 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 3;4 4.6826E-05 90.896 By MS/MS 6 0 2 2 50110000 50110000 0 13488 1210;1751;2290 14283 34408;34409 27492;27493 27492 2 344470 0 TIGIIGAPFSK ______________________________ AKSRTIGIIGAPFSKGQPRGGVEEGPTVLR R T I S K G 1 0 0 0 0 0 0 2 0 3 0 1 0 1 1 1 1 0 0 0 0 0 11 0 1102.6386 P05089 P05089 7 17 ARG1 Arginase-1 yes yes 2 0.0035613 123.79 By MS/MS 3 0 1 1 743140 0 743140 13489 484 14284 34410 27494 27494 1 0 94591 TIGTGLVTNTLAMTEEEK ILEKGQRFTLRDGNRTIGTGLVTNTLAMTE TGLVTNTLAMTEEEKNIKWG__________ R T I E K N 1 0 1 0 0 0 3 2 0 1 2 1 1 0 0 0 5 0 0 1 0 0 18 0 1906.9558 P49411 P49411 430 447 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.82E-44 321.78 By MS/MS 7.2 0.748 1 2 2 5 10645000 10645000 0 13490 949 14285;14286 34411;34412;34413;34414;34415 27495;27496;27497 27497 523 3 156560 0 TIGTGLVTNTLAMTEEEKNIK ILEKGQRFTLRDGNRTIGTGLVTNTLAMTE VTNTLAMTEEEKNIKWG_____________ R T I I K W 1 0 2 0 0 0 3 2 0 2 2 2 1 0 0 0 5 0 0 1 0 0 21 1 2262.1777 P49411 P49411 430 450 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.01348 110.22 By MS/MS 7 0 1 1 677990 677990 0 13491 949 14287 34416 27498 27498 523 1 10643 0 TIGVDFLER IQRYCKGIFTKDYKKTIGVDFLERQIQVND TKDYKKTIGVDFLERQIQVNDEDVRLMLWD K T I E R Q 0 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 9 0 1048.5553 Q9ULC3 Q9ULC3 41 49 RAB23 Ras-related protein Rab-23 yes yes 2 0.011061 98.582 By MS/MS 8 0 1 1 625910 625910 0 13492 2772 14288 34417 27499 27499 1 7902 0 TIHAELSK IPILRAALKLEPSNKTIHAELSKLVKKHAA KLEPSNKTIHAELSKLVKKHAAQRSTETAL K T I S K L 1 0 0 0 0 0 1 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 8 0 897.49198 Q14318 Q14318 341 348 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.018551 101.25 By MS/MS 5.5 0.5 1 1 2 4224700 4224700 0 13493 1438 14289 34418;34419 27500 27500 1 29655 0 TIHTSTGK AFRKNPSDPKLAHLKTIHTSTGKNLLVSGW PKLAHLKTIHTSTGKNLLVSGWWGFVRHPN K T I G K N 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 0 0 8 0 843.44503 Q14739 Q14739 525 532 LBR Lamin-B receptor yes yes 2 0.018237 101.6 By MS/MS 2 0.816 1 1 1 3 572380 572380 0 13494 1456 14290 34420;34421;34422 27501;27502 27502 2 135710 0 TIIDFEPNETTDLEK QQLVTTAKRWDSSSKTIIDFEPNETTDLEK TIIDFEPNETTDLEKSLLIRYQIPLSADQL K T I E K S 0 0 1 2 0 0 3 0 0 2 1 1 0 1 1 0 3 0 0 0 0 0 15 0 1763.8465 P42694 P42694 412 426 HELZ Probable helicase with zinc finger domain yes yes 2 0.0021421 111.63 By MS/MS 2 0 1 1 169640 169640 0 13495 884 14291 34423 27503 27503 1 57379 0 TIIGQQGDQSCANK ENLLWVDKYKPTSLKTIIGQQGDQSCANKL KTIIGQQGDQSCANKLLRWLRNWQKSSSED K T I N K L 1 0 1 1 1 3 0 2 0 2 0 1 0 0 0 1 1 0 0 0 0 0 14 0 1518.7097 P35251 P35251 597 610 RFC1 Replication factor C subunit 1 yes yes 2 3.7335E-11 236.08 By MS/MS 3 0 1 1 453060 453060 0 13496 818 14292 34424 27504 27504 1 8289.7 0 TIIIEDNR DFRYIFVEIESYPRRTIIIEDNRSQDD___ IESYPRRTIIIEDNRSQDD___________ R T I N R S 0 1 1 1 0 0 1 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 8 0 972.52401 Q9BVV7 Q9BVV7 237 244 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.0075442 113.71 By MS/MS 9 0 1 1 1346300 1346300 0 13497 2341 14293 34425 27505 27505 1 26496 0 TIIIEDNRSQDD DFRYIFVEIESYPRRTIIIEDNRSQDD___ PRRTIIIEDNRSQDD_______________ R T I D D - 0 1 1 3 0 1 1 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 12 1 1417.6685 Q9BVV7 Q9BVV7 237 248 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 1.0554E-18 270.36 By MS/MS 9 0 1 1 1486500 1486500 0 13498 2341 14294 34426 27506 27506 1 29254 0 TIIIQTVPTLMPLAK PAAPKTQTNSSVPAKTIIIQTVPTLMPLAK TIIIQTVPTLMPLAKQQPIISLQPAPTKGQ K T I A K Q 1 0 0 0 0 1 0 0 0 3 2 1 1 0 2 0 3 0 0 1 0 0 15 0 1637.979 P18850 P18850 202 216 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.0011785 119.21 By MS/MS 4 0 1 1 193190 193190 0 13499 656 14295 34427 27507 27507 329 1 18181 0 TIIPLISQCTPK PARVNVPVIGGHAGKTIIPLISQCTPKVDF AGKTIIPLISQCTPKVDFPQDQLTALTGRI K T I P K V 0 0 0 0 1 1 0 0 0 3 1 1 0 0 2 1 2 0 0 0 0 0 12 0 1369.7639 P40926 P40926 204 215 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0017903 112.94 By MS/MS 7.5 0.5 1 1 2 3885500 3885500 0 13500 862 14296 34428;34429 27508;27509 27509 2 51947 0 TIISLDTSQMNR TSVSYGLMCPADETRTIISLDTSQMNRILW ETRTIISLDTSQMNRILWVDENNLTAHVEA R T I N R I 0 1 1 1 0 1 0 0 0 2 1 0 1 0 0 2 2 0 0 0 0 0 12 0 1377.6922 O00116 O00116 254 265 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 2.0315E-12 228.98 By MS/MS By matching 5 0 3 2 1 2542800 2493000 49733 13501 80 14297;14298 34430;34431;34432 27510;27511;27512 27510 56 3 25004 41765 TIISYIDEQFER TPGYGDAINCRDCFKTIISYIDEQFERYLH CFKTIISYIDEQFERYLHDESGLNRRHIID K T I E R Y 0 1 0 1 0 1 2 0 0 3 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1512.746 Q15019 Q15019 117 128 SEPT2 Septin-2 yes yes 2 2.4299E-12 225.93 By MS/MS 7 0 1 1 79942 79942 0 13502 1472 14299 34433 27513;27514 27513 2 1255 0 TIKQESGR ASNTVEKPSFISERRTIKQESGRAGVRPSS SFISERRTIKQESGRAGVRPSSSGSAWEAC R T I G R A 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 8 1 917.49304 Q12789 Q12789 831 838 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.033751 94.309 By MS/MS 2 0 1 1 236140 236140 0 13503 1328 14300 34434 27515 27515 1 79873 0 TILDANEEFK QQSEEAMQSLVTSSRTILDANEEFKSMSGT VTSSRTILDANEEFKSMSGTIQLGRKLITK R T I F K S 1 0 1 1 0 0 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1178.5819 Q12981 Q12981 169 178 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.012054 90.108 By MS/MS 8 0 1 1 2740500 2740500 0 13504 1343 14301 34435 27516 27516 1 34599 0 TILDPLTLVQGNQNEDK EELKSKNLSLESQIKTILDPLTLVQGNQNE LDPLTLVQGNQNEDKHLVTDNPSKINPETV K T I D K H 0 0 2 2 0 2 1 1 0 1 3 1 0 0 1 0 2 0 0 1 0 0 17 0 1896.9793 Q5W0B1 Q5W0B1 126 142 RNF219 RING finger protein 219 yes yes 2 1.1212E-16 274.39 By MS/MS 4 0 1 1 363650 363650 0 13505 1660 14302 34436 27517 27517 1 34222 0 TILEEEITPTIQK QKTIEKKEAKLKEIKTILEEEITPTIQKLK IKTILEEEITPTIQKLKEERSSYLEYQKVM K T I Q K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 0 3 0 0 0 0 0 13 0 1513.8239 O95347 O95347 197 209 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 3.7527E-24 275.57 By MS/MS 3.5 0.5 1 1 2 2806800 2806800 0 13506 405 14303 34437;34438 27518;27519 27518 2 95251 0 TILESNDVPGMLAYSLK IGIALETRRLDVFEKTILESNDVPGMLAYS LESNDVPGMLAYSLKLCMSLMQNKQFRNKV K T I L K L 1 0 1 1 0 0 1 1 0 1 3 1 1 0 1 2 1 0 1 1 0 0 17 0 1849.9496 Q99460 Q99460 166 182 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.00032419 171.26 By MS/MS 4 0 1 1 563120 563120 0 13507 2246 14304 34439 27520 27520 1042 1 52994 0 TILKDATLTALDR MGAGIAQVSVDKGLKTILKDATLTALDRGQ LKTILKDATLTALDRGQQQVFKGLNDKVKK K T I D R G 2 1 0 2 0 0 0 0 0 1 3 1 0 0 0 0 3 0 0 0 0 0 13 1 1429.814 P40939 P40939 387 399 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 0.00081751 141.73 By MS/MS 5.33 0.471 2 1 3 12853000 12853000 0 13508 865 14305 34440;34441;34442 27521;27522 27522 2 126430 0 TILPAAAQDVYYR QRQPDSGISSIRSFKTILPAAAQDVYYRDE FKTILPAAAQDVYYRDEIGNVSTSHLLILD K T I Y R D 3 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 0 0 13 0 1479.7722 P04843 P04843 282 294 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.00043547 139.76 By MS/MS By matching 5 0 2 1 1 7692900 7666400 26524 13509 478 14306 34443;34444 27523 27523 1 76890 22275 TILSLMTR YSGAPSEQQTYDYAKTILSLMTREKHPDGK QTYDYAKTILSLMTREKHPDGKILIIGGSI K T I T R E 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 1 2 0 0 0 0 0 8 0 933.53174 P53396 P53396 322 329 ACLY ATP-citrate synthase yes yes 2 0.0085009 112.41 By MS/MS 4 0.816 1 1 1 3 3375300 3375300 0 13510 1030 14307 34445;34446;34447 27524;27525 27525 2 274540 0 TILTLTGVSTLGDVK RLDTDILLGATCGLKTILTLTGVSTLGDVK TILTLTGVSTLGDVKNNQESDCVSKKKMVP K T I V K N 0 0 0 1 0 0 0 2 0 1 3 1 0 0 0 1 4 0 0 2 0 0 15 0 1516.8712 A6NDG6 A6NDG6 276 290 PGP Phosphoglycolate phosphatase yes yes 2 0.00019613 176.87 By MS/MS 8 0 1 1 79588 79588 0 13511 20 14308 34448 27526 27526 1 1004.8 0 TINEVENQILTR HIRVGWEQLLTTIARTINEVENQILTRDAK IARTINEVENQILTRDAKGISQEQMQEFRA R T I T R D 0 1 2 0 0 1 2 0 0 2 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1428.7573 O43707;P12814 O43707 746 757 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 2 1.2783E-13 182.41 By MS/MS 4.5 0.5 1 1 2 5589200 5589200 0 13512 229;595 14309 34449;34450 27527 27527 0 488560 0 TINKAWVESR VLKKIYEDGDDDMKRTINKAWVESREKQAK DDMKRTINKAWVESREKQAKGDTEF_____ R T I S R E 1 1 1 0 0 0 1 0 0 1 0 1 0 0 0 1 1 1 0 1 0 0 10 1 1202.6408 Q9HB71 Q9HB71 209 218 CACYBP Calcyclin-binding protein yes yes 2;3 0.042563 97.452 By MS/MS 8 0 2 2 1192000 1192000 0 13513 2501 14310 34451;34452 27528;27529 27528 2 15049 0 TINQIRQDAVK HHWVPRKAFLDNGPKTINQIRQDAVKDLGV NGPKTINQIRQDAVKDLGVFIPAPMAQGMR K T I V K D 1 1 1 1 0 2 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 11 1 1284.715 P78344 P78344 322 332 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.024419 104.07 By MS/MS 4.5 0.5 1 1 2 1035500 1035500 0 13514 1219 14311 34453;34454 27530 27530 1 85385 0 TINVYPNFRPTPK GLIENPALLRWAYARTINVYPNFRPTPKNS ARTINVYPNFRPTPKNSLMGALCGFGPLIF R T I P K N 0 1 2 0 0 0 0 0 0 1 0 1 0 1 3 0 2 0 1 1 0 0 13 1 1545.8304 O95168 O95168 73 85 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 1.634E-06 177.57 By MS/MS 10 0 1 1 0 0 0 13515 389 14312 34455 27531 27531 1 0 0 TIPIDGDFFSYTR CLRYYAGWADKYHGKTIPIDGDFFSYTRHE GKTIPIDGDFFSYTRHEPVGVCGQIIPWNF K T I T R H 0 1 0 2 0 0 0 1 0 2 0 0 0 2 1 1 2 0 1 0 0 0 13 0 1530.7355 P05091 P05091 160 172 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.0016127 130.1 By MS/MS 6 0 1 1 2649900 2649900 0 13516 485 14313 34456 27532 27532 1 18216 0 TIQAQLQER PLNEFEERVTVAFIRTIQAQLQERNDPQQL TVAFIRTIQAQLQERNDPQQLLLDAKHMFP R T I E R N 1 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1085.5829 Q9ULV0 Q9ULV0 1796 1804 MYO5B Unconventional myosin-Vb yes yes 2 0.024363 103.88 By matching By MS/MS 2.5 0.5 1 1 1 1 535240 456070 79169 13517 2775 14314 34457;34458 27533 27533 1 8344.8 111960 TIQDKNKEIER EDNARHKQSLEEAAKTIQDKNKEIERLKAE EAAKTIQDKNKEIERLKAEFQEEAKRRWEY K T I E R L 0 1 1 1 0 1 2 0 0 2 0 2 0 0 0 0 1 0 0 0 0 0 11 2 1372.731 P15924 P15924 1319 1329 DSP Desmoplakin yes no 2;3 0.0041251 129.88 By MS/MS By MS/MS 2.2 1.17 2 1 1 1 3 2 2063400 1610900 452420 13518 628 14315 34459;34460;34461;34462;34463 27534;27535 27534 2 327500 167610 TIQFVDWCPTGFK PKDVNAAIATIKTKRTIQFVDWCPTGFKVG KRTIQFVDWCPTGFKVGINYQPPTVVPGGD R T I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 0 2 1 0 1 0 0 13 0 1597.7599 Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 340 352 TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2 1.8531E-11 232.56 By MS/MS 6.75 0.829 2 1 1 4 35814000 35814000 0 13519 1751;2290 14316 34464;34465;34466;34467 27536;27537;27538;27539 27536 4 246830 0 TIQGDEEDLR RLDQWLTTMLLRIKKTIQGDEEDLR_____ LRIKKTIQGDEEDLR_______________ K T I L R - 0 1 0 2 0 1 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1174.5466 P54920 P54920 286 295 NAPA Alpha-soluble NSF attachment protein yes yes 2 0.035881 79.148 By MS/MS 8 0 1 1 1034200 1034200 0 13520 1049 14317 34468 27540 27540 1 13057 0 TIQVDNTDAEGR KANKPGDVVRAKNGKTIQVDNTDAEGRLIL NGKTIQVDNTDAEGRLILADALCYAHTFNP K T I G R L 1 1 1 2 0 1 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 12 0 1317.6161 P28838 P28838 357 368 LAP3 Cytosol aminopeptidase yes yes 2 1.0468E-05 191.33 By MS/MS 6 0 1 1 1683700 1683700 0 13521 756 14318 34469 27541 27541 1 11574 0 TIRYPDPLIK VGTKGIPHLVTHDARTIRYPDPLIKVNDTI THDARTIRYPDPLIKVNDTIQIDLETGKIT R T I I K V 0 1 0 1 0 0 0 0 0 2 1 1 0 0 2 0 1 0 1 0 0 0 10 1 1214.7023 P62701;Q8TD47 P62701 146 155 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 3 0.00023222 135.86 By MS/MS By matching 8.75 0.829 2 1 1 3 1 13695000 13649000 45269 13522 1165 14319 34470;34471;34472;34473 27542;27543;27544 27542 3 178160 61088 TISHVIIGLK LTPCETENPMGGYGKTISHVIIGLKTAKGT GGYGKTISHVIIGLKTAKGTKQLKLDPSIF K T I L K T 0 0 0 0 0 0 0 1 1 3 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1079.6703 Q9Y265 Q9Y265 153 162 RUVBL1 RuvB-like 1 yes yes 2;3 0.00018633 145.9 By MS/MS 6.25 0.433 3 1 4 7059400 7059400 0 13523 2815 14320 34474;34475;34476;34477 27545;27546;27547 27546 3 51329 0 TISSLEEIVEK IYAYPSNITSETGFRTISSLEEIVEKQGDT TGFRTISSLEEIVEKQGDTIEYLKRHNALL R T I E K Q 0 0 0 0 0 0 3 0 0 2 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1246.6656 Q8IY95 Q8IY95 227 237 TMEM192 Transmembrane protein 192 yes yes 2 0.00025762 138.08 By MS/MS 8 0 1 1 327720 327720 0 13524 1884 14321 34478 27548 27548 1 4137.5 0 TISSYTAFSR EPQMVLFNLYDDWLKTISSYTAFSRLILIL DDWLKTISSYTAFSRLILILRALHVNNDRA K T I S R L 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 2 0 1 0 0 0 10 0 1131.556 Q6P2Q9 Q6P2Q9 1926 1935 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00089907 125.57 By MS/MS 2 0.816 1 1 1 3 1329300 1329300 0 13525 1708 14322 34479;34480;34481 27549 27549 1 408500 0 TISTSDPAEVLVK TSKTRPKQEKAFSLKTISTSDPAEVLVKNS LKTISTSDPAEVLVKNSQPIKTLPPATSTE K T I V K N 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 2 0 0 13 0 1358.7293 Q86UE4 Q86UE4 492 504 MTDH Protein LYRIC yes yes 2 0.0015845 115.57 By MS/MS 5 0 1 1 1496500 1496500 0 13526 1819 14323 34482 27550 27550 1 15009 0 TITELGEKAR VIRNVEAMNFADIERTITELGEKARKNELA ADIERTITELGEKARKNELAIEDMDGGTFT R T I A R K 1 1 0 0 0 0 2 1 0 1 1 1 0 0 0 0 2 0 0 0 0 0 10 1 1116.6139 P36957 P36957 346 355 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.016161 109.48 By MS/MS By matching 6 0 2 1 1 896790 826250 70537 13527 842 14324 34483;34484 27551 27551 1 5679.8 72280 TITLEVEPSDTIENVK ______________________________ ITLEVEPSDTIENVKAKIQDKEGIPPDQQR K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 P62979;P0CG47;P0CG48;P62987 P62979 12 27 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 2 2.3933E-56 350.25 By MS/MS By MS/MS 5.2 2.99 3 3 3 3 2 2 2 2 2 3 15 10 232030000 228010000 4020100 13528 1190;1191 14325 34485;34486;34487;34488;34489;34490;34491;34492;34493;34494;34495;34496;34497;34498;34499;34500;34501;34502;34503;34504;34505;34506;34507;34508;34509 27552;27553;27554;27555;27556;27557;27558;27559;27560;27561;27562;27563;27564;27565;27566;27567;27568;27569;27570;27571;27572;27573;27574;27575;27576;27577;27578;27579;27580;27581;27582;27583;27584;27585;27586 27581 35 19192000 3626600 TITLEVEPSDTIENVKAK ______________________________ LEVEPSDTIENVKAKIQDKEGIPPDQQRLI K T I A K I 1 0 1 1 0 0 3 0 0 2 1 2 0 0 1 1 3 0 0 2 0 0 18 1 1986.0521 P62979;P0CG47;P0CG48;P62987 P62979 12 29 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 2;3 1.9632E-10 231.74 By MS/MS By MS/MS 5.32 2.83 2 2 2 2 2 2 2 2 1 2 17 2 42354000 41926000 428660 13529 1190;1191 14326 34510;34511;34512;34513;34514;34515;34516;34517;34518;34519;34520;34521;34522;34523;34524;34525;34526;34527;34528 27587;27588;27589;27590;27591;27592;27593;27594;27595;27596;27597;27598;27599;27600;27601 27590 15 2179900 142590 TITSSYYR IKLQIWDTAGQERFRTITSSYYRGAHGIIV AGQERFRTITSSYYRGAHGIIVVYDVTDQE R T I Y R G 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 2 0 2 0 0 0 8 0 989.48181 P62820;Q9H0U4 P62820 75 82 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 2 0.0049312 125.81 By MS/MS By matching 9 0 2 1 1 4939200 4903700 35408 13530 1171;2416 14327 34529;34530 27602 27602 1 96506 80742 TIVEEVQDGKVISSR LTQYKKEPVTTRQVRTIVEEVQDGKVISSR TIVEEVQDGKVISSREQVHQTTR_______ R T I S R E 0 1 0 1 0 1 2 1 0 2 0 1 0 0 0 2 1 0 0 3 0 0 15 1 1658.8839 CON__Q04695;Q04695 CON__Q04695 410 424 KRT17 Keratin, type I cytoskeletal 17 no no 3 0.049411 65.219 By MS/MS 10 0 1 1 116170 0 116170 + 13531 57 14328 34531 27603 27603 1 0 148730 TIVFVETK LIRLMEEIMSEKENKTIVFVETKRRCDELT MSEKENKTIVFVETKRRCDELTRKMRRDGW K T I T K R 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 2 0 0 2 0 0 8 0 935.53278 P17844 P17844 344 351 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.011474 109.11 By MS/MS 5 0 1 1 2269300 2269300 0 13532 646 14329 34532 27604 27604 1 22760 0 TIVITSHPGQIVK ALCGFQKPISTLDNRTIVITSHPGQIVKHG NRTIVITSHPGQIVKHGDIKCVLNEGMPIY R T I V K H 0 0 0 0 0 1 0 1 1 3 0 1 0 0 1 1 2 0 0 2 0 0 13 0 1391.8136 P31689 P31689 284 296 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 2.5925E-05 169.99 By MS/MS 7.5 1.12 1 1 1 1 4 33502000 33502000 0 13533 787 14330 34533;34534;34535;34536 27605;27606 27606 2 303510 0 TIVQLENEIYQIK SNWVSLVSKNYEIERTIVQLENEIYQIKQQ ERTIVQLENEIYQIKQQHGEANKENIRQDF R T I I K Q 0 0 1 0 0 2 2 0 0 3 1 1 0 0 0 0 1 0 1 1 0 0 13 0 1589.8665 O75934 O75934 198 210 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 2 5.1903E-12 243.91 By MS/MS 8 0 1 1 289800 289800 0 13534 354 14331 34537 27607 27607 1 3658.7 0 TIYAGNALCTVK ISDIIAIKSPDTFVRTIYAGNALCTVKCDE FVRTIYAGNALCTVKCDEKVKVFSVRGTSF R T I V K C 2 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 2 0 1 1 0 0 12 0 1309.67 P13804 P13804 147 158 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.00017712 151.98 By MS/MS 8 0 1 1 2595900 2595900 0 13535 606 14332 34538 27608 27608 1 32772 0 TKADFFEDENGQR GGQSVTMGYYKNEAKTKADFFEDENGQRWL AKTKADFFEDENGQRWLCTGDIGEFEPDGC K T K Q R W 1 1 1 2 0 1 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 13 1 1555.6903 O95573 O95573 546 558 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2;3 6.9636E-12 247.13 By MS/MS 5 0 2 2 4671300 4671300 0 13536 417 14333 34539;34540 27609;27610 27610 2 46851 0 TKDDIIICEIGDVFK KDVVVQHVHFDGLGRTKDDIIICEIGDVFK TKDDIIICEIGDVFKAKNLIEVMRKSHEAR R T K F K A 0 0 0 3 1 0 1 1 0 4 0 2 0 1 0 0 1 0 0 1 0 0 15 1 1764.8968 Q9Y512 Q9Y512 58 72 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 2;3 2.6479E-05 204.35 By MS/MS 6 0 2 2 938440 938440 0 13537 2904 14334 34541;34542 27611;27612 27612 2 6451.1 0 TKDLIIEQR KRELLELASRMENERTKDLIIEQRFHRTII RMENERTKDLIIEQRFHRTIIGQKGERIRE R T K Q R F 0 1 0 1 0 1 1 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1114.6346 Q00341 Q00341 509 517 HDLBP Vigilin yes yes 2 0.0053834 132.88 By MS/MS 3.5 0.5 1 1 2 2296000 2296000 0 13538 1260 14335 34543;34544 27613 27613 1 80918 0 TKDQILTSR NIGRSVSKTPDESTKTKDQILTSRINAVER PDESTKTKDQILTSRINAVERDLLEPSPAD K T K S R I 0 1 0 1 0 1 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 9 1 1060.5877 Q86XL3 Q86XL3 758 766 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0025998 145.9 By MS/MS 4 0 1 1 1027300 1027300 0 13539 1845 14336 34545 27614 27614 1 96678 0 TKEEALELINGYIQK QSRRPSSWRQEKITRTKEEALELINGYIQK TKEEALELINGYIQKIKSGEEDFESLASQF R T K Q K I 1 0 1 0 0 1 3 1 0 2 2 2 0 0 0 0 1 0 1 0 0 0 15 1 1747.9356 Q13526 Q13526 81 95 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 3 0.05106 60.657 By MS/MS 10 0 1 1 68386 68386 0 13540 1394 14337 34546 27615 27615 1 3685.7 0 TKEEINELNR EMKATVIRHGETLRRTKEEINELNRMIQRL ETLRRTKEEINELNRMIQRLTAEVENAKCQ R T K N R M 0 1 2 0 0 0 3 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 10 1 1244.6361 CON__O43790;CON__Q14533;O43790;Q14533;CON__Q6NT21;CON__P78385;P78385;CON__P78386;A6NCN2;P78386 CON__O43790 318 327 KRT86;KRT81;KRT83;KRT87P;KRT85 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Putative keratin-87 protein;Keratin, type II cuticular Hb5 yes no 2 8.1945E-05 167.09 By MS/MS 10 0 1 1 416290 0 416290 + 13541 35 14338 34547 27616 27616 1 0 532970 TKEEVEAAKAAALLAK QIALDRAERAARFAKTKEEVEAAKAAALLA KEEVEAAKAAALLAKQAEMEVKRESYARER K T K A K Q 6 0 0 0 0 0 3 0 0 0 2 3 0 0 0 0 1 0 0 1 0 0 16 2 1641.9301 Q92575 Q92575 286 301 UBXN4 UBX domain-containing protein 4 yes yes 3 0.029628 72.428 By MS/MS 5 0 1 1 1518500 1518500 0 13542 2058 14339 34548 27617 27617 1 15229 0 TKENVNATENCISAVGK ALPLLVRVIQSADSKTKENVNATENCISAV ENVNATENCISAVGKIMKFKPDCVNVEEVL K T K G K I 2 0 3 0 1 0 2 1 0 1 0 2 0 0 0 1 2 0 0 2 0 0 17 1 1833.8891 O00410 O00410 962 978 IPO5 Importin-5 yes yes 2;3 1.1752E-43 324.84 By MS/MS 4.33 0.471 2 1 3 5118500 5118500 0 13543 103 14340 34549;34550;34551 27618;27619 27619 2 423320 0 TKEVFHFSQAEK SLLSIRQDDKVVCPRTKEVFHFSQAEKVYI CPRTKEVFHFSQAEKVYIM___________ R T K E K V 1 0 0 0 0 1 2 0 1 0 0 2 0 2 0 1 1 0 0 1 0 0 12 1 1449.7252 Q7L5Y9 Q7L5Y9 381 392 MAEA Macrophage erythroblast attacher yes yes 3 0.019761 79.283 By MS/MS 7 0 1 1 1033000 1033000 0 13544 1767 14341 34552 27620 27620 1 16217 0 TKEVYELLDSPGK TAEVLNIGKKLYEGKTKEVYELLDSPGKVL GKTKEVYELLDSPGKVLLQSKDQITAGNAA K T K G K V 0 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 1 1 0 0 13 1 1477.7664 P22234 P22234 18 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2;3 1.4184E-07 222.2 By MS/MS 7.33 0.471 2 1 3 7555000 7555000 0 13545 689 14342 34553;34554;34555 27621;27622 27621 2 117990 0 TKFEECRK LAIRFLNAENAQKFKTKFEECRKEIEEREK ENAQKFKTKFEECRKEIEEREKKAGSGKND K T K R K E 0 1 0 0 1 0 2 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 8 2 1096.5335 P43487 P43487 153 160 RANBP1 Ran-specific GTPase-activating protein yes yes 2 0.017722 139.97 By MS/MS 8 0 1 1 282240 282240 0 13546 899 14343 34556 27623 27623 1 3563.2 0 TKFENLCK LPEDEEEKKKQEEKKTKFENLCKIMKDILE KKQEEKKTKFENLCKIMKDILEKKVEKVVV K T K C K I 0 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 0 0 0 8 1 1038.5168 P07900;Q58FG0 P07900 566 573 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 3 0.0028955 138.06 By MS/MS 4 0 1 1 707670 707670 0 13547 513 14344 34557 27624 27624 1 66596 0 TKGTSSFGK ______________________________ ______________________________ M T K G K R 0 0 0 0 0 0 0 2 0 0 0 2 0 1 0 2 2 0 0 0 0 0 9 1 911.47125 P61927 P61927 2 10 RPL37 60S ribosomal protein L37 yes yes 2 0.0070456 128.6 By MS/MS 9.5 0.5 1 1 2 2732300 2732300 0 13548 1132 14345 34558;34559 27625 27625 1 122310 0 TKHKLDVTSVEDYK KIAILTCPFEPPKPKTKHKLDVTSVEDYKA KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ K T K Y K A 0 0 0 2 0 0 1 0 1 0 1 3 0 0 0 1 2 0 1 2 0 0 14 2 1661.8625 P48643 P48643 262 275 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.00087168 124.81 By MS/MS 6 0 1 1 5370800 5370800 0 13549 940 14346 34560 27626 27626 1 36920 0 TKNETDEDGWTTVR KASWRAEKDRESLRRTKNETDEDGWTTVRR RTKNETDEDGWTTVRR______________ R T K V R R 0 1 1 2 0 0 2 1 0 0 0 1 0 0 0 0 4 1 0 1 0 0 14 1 1650.7485 Q14152 Q14152 1368 1381 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 1.1442E-42 340.88 By MS/MS 4 1.55 3 1 1 5 9173100 9173100 0 13550 1422 14347 34561;34562;34563;34564;34565 27627;27628;27629;27630 27629 4 197980 0 TKNETDEDGWTTVRR KASWRAEKDRESLRRTKNETDEDGWTTVRR TKNETDEDGWTTVRR_______________ R T K R R - 0 2 1 2 0 0 2 1 0 0 0 1 0 0 0 0 4 1 0 1 0 0 15 2 1806.8497 Q14152 Q14152 1368 1382 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0064548 96.135 By MS/MS 4.67 1.7 1 1 1 3 6362200 6362200 0 13551 1422 14348 34566;34567;34568 27631;27632 27632 2 142650 0 TKPTHGIGK YSVGGILLSISRPYKTKPTHGIGKYKHLIK ISRPYKTKPTHGIGKYKHLIKAEEPKKKKG K T K G K Y 0 0 0 0 0 0 0 2 1 1 0 2 0 0 1 0 2 0 0 0 0 0 9 1 937.53451 Q96GC5 Q96GC5 50 58 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 3 0.038989 98.033 By MS/MS 9 0 1 1 790620 790620 0 13552 2158 14349 34569 27633 27633 1 15560 0 TKPYIQVDIGGGQTK QQDIKFLPFKVVEKKTKPYIQVDIGGGQTK TKPYIQVDIGGGQTKTFAPEEISAMVLTKM K T K T K T 0 0 0 1 0 2 0 3 0 2 0 2 0 0 1 0 2 0 1 1 0 0 15 1 1603.857 P11021 P11021 124 138 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0024845 143.64 By MS/MS 5 0 1 1 4604000 4604000 0 13553 571 14350 34570 27634 27634 1 46176 0 TKSENGLEFTSSGSANTETTK FTKGYGFGLIKLDLKTKSENGLEFTSSGSA LEFTSSGSANTETTKVTGSLETKYRWTEYG K T K T K V 1 0 2 0 0 0 3 2 0 0 1 2 0 1 0 4 5 0 0 0 0 0 21 1 2188.0132 P21796 P21796 33 53 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 3 0.035819 58.796 By MS/MS 8 0 1 1 304950 304950 0 13554 681 14351 34571 27635 27635 1 3850 0 TKTPGPGAQSALR ITALHIKLRATGGNRTKTPGPGAQSALRAL NRTKTPGPGAQSALRALARSGMKIGRIEDV R T K L R A 2 1 0 0 0 1 0 2 0 0 1 1 0 0 2 1 2 0 0 0 0 0 13 1 1282.6993 P62263 P62263 105 117 RPS14 40S ribosomal protein S14 yes yes 2;3 0.005417 144.28 By MS/MS By matching 10 0 4 2 2 32879000 32803000 76670 13555 1147 14352 34572;34573;34574;34575 27636;27637 27637 2 1767900 98159 TKVEATKNETSAPFK DGHTKEMPTSGSKEKTKVEATKNETSAPFK TKVEATKNETSAPFKERPTPSLNNNCTTSE K T K F K E 2 0 1 0 0 0 2 0 0 0 0 3 0 1 1 1 3 0 0 1 0 0 15 2 1649.8625 P07814 P07814 719 733 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.00035231 141.59 By MS/MS 3 0 1 1 2990100 2990100 0 13556 512 14353 34576 27638 27638 1 54710 0 TKYEHELALR ILQIDNARLAADDFRTKYEHELALRQTVEA ADDFRTKYEHELALRQTVEADVNGLRRVLD R T K L R Q 1 1 0 0 0 0 2 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 10 1 1258.667 CON__P08779;P08779 CON__P08779 204 213 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.0042658 134.57 By MS/MS By MS/MS 3.56 2.01 2 1 2 1 1 1 1 7 2 5179100 3710300 1468800 + 13557 47 14354 34577;34578;34579;34580;34581;34582;34583;34584;34585 27639;27640;27641;27642 27639 4 225860 210270 TKYETELNLR LLQIDNARLAADDFRTKYETELNLRMSVEA ADDFRTKYETELNLRMSVEADINGLRRVLD R T K L R M 0 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 2 0 1 0 0 0 10 1 1265.6616 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 202 211 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 1.0044E-08 205.83 By MS/MS By MS/MS 3.62 2.12 3 3 3 2 1 1 3 11 5 30913000 27518000 3394900 + 13558 39 14355 34586;34587;34588;34589;34590;34591;34592;34593;34594;34595;34596;34597;34598;34599;34600;34601 27643;27644;27645;27646;27647;27648;27649;27650;27651 27645 8 2229500 1416500 TLAAEMQELR EESHNRFSATEVTNKTLAAEMQELRVRLAE EVTNKTLAAEMQELRVRLAEAEETARTAER K T L L R V 2 1 0 0 0 1 2 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 10 0 1160.586 Q8N163 Q8N163 856 865 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.039734 77.288 By MS/MS 3 0 1 1 126140 126140 0 13559 1901 14356 34602 27652 27652 1 2308.1 0 TLADAEDKCVIEGNNCTFVR QRRSPPILPTLDSLKTLADAEDKCVIEGNN EDKCVIEGNNCTFVRDLSRIKPSQNTETLE K T L V R D 2 1 2 2 2 0 2 1 0 1 1 1 0 1 0 0 2 0 0 2 0 0 20 1 2311.0573 Q9NVV4 Q9NVV4 404 423 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 2.0926E-05 122.22 By MS/MS 6 0 1 1 3696400 3696400 0 13560 2605 14357 34603 27653;27654 27653 2 25410 0 TLAEINANR QIAVPRNDEWARFGRTLAEINANRADAEEE WARFGRTLAEINANRADAEEEAATRIPA__ R T L N R A 2 1 2 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1000.5302 Q13409 Q13409 617 625 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 0.0064478 106.68 By MS/MS 5 0 1 1 710780 710780 0 13561 1379 14358 34604 27655 27655 1 7128.8 0 TLAEINANRADAEEEAATR QIAVPRNDEWARFGRTLAEINANRADAEEE INANRADAEEEAATRIPA____________ R T L T R I 6 2 2 1 0 0 4 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 19 1 2043.9821 Q13409 Q13409 617 635 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 3 6.3067E-05 171.87 By MS/MS 5 0 1 1 2743500 2743500 0 13562 1379 14359 34605 27656 27656 1 27515 0 TLAETLVNLDVR PLHLAAYNGHCEALKTLAETLVNLDVRDHK ALKTLAETLVNLDVRDHKGRTALFLATERG K T L V R D 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1342.7456 Q8NB46 Q8NB46 603 614 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 2 0.0084996 93.345 By MS/MS 4 0 1 1 182490 182490 0 13563 1936 14360 34606 27657 27657 1 17173 0 TLAFTSVDLTNK GEDIVITAHVLKQGKTLAFTSVDLTNKATG QGKTLAFTSVDLTNKATGKLIAQGRHTKHL K T L N K A 1 0 1 1 0 0 0 0 0 0 2 1 0 1 0 1 3 0 0 1 0 0 12 0 1308.6925 Q9NPJ3 Q9NPJ3 112 123 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 2 6.4951E-13 242.35 By MS/MS 10 0 1 1 256450 256450 0 13564 2533 14361 34607 27658 27658 1 13822 0 TLAGDVHIVR CTGNLCTKESYDYLKTLAGDVHIVRGDFDE YDYLKTLAGDVHIVRGDFDENLNYPEQKVV K T L V R G 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1079.6087 Q9UBQ0 Q9UBQ0 51 60 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 2 0.00034708 137.14 By MS/MS By matching 8.33 0.471 2 1 2 1 3961900 3931300 30587 13565 2702 14362 34608;34609;34610 27659 27659 1 67380 41276 TLAHFRPIEDNEK FPEGEDQVNFRGFMRTLAHFRPIEDNEKSK MRTLAHFRPIEDNEKSKDVNGPEPLNSRSN R T L E K S 1 1 1 1 0 0 2 0 1 1 1 1 0 1 1 0 1 0 0 0 0 0 13 1 1568.7947 Q99653 Q99653 86 98 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.00083697 166.11 By MS/MS 8.5 0.5 1 1 2 502440 502440 0 13566 2257 14363 34611;34612 27660;27661 27661 2 7240.4 0 TLAIELAPR SPYNVSKTALLGLNKTLAIELAPRNIRVNC LLGLNKTLAIELAPRNIRVNCLAPGLIKTS K T L P R N 2 1 0 0 0 0 1 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 9 0 982.58113 P0CG22 P0CG22 198 206 DHRS4L1 Putative dehydrogenase/reductase SDR family member 4-like 1 no no 2 0.0013614 129.42 By MS/MS 8 0 1 1 1734500 1734500 0 13567 547 14364 34613 27662 27662 1 21898 0 TLALLQTGCCR PGDIVLDLCAAPGGKTLALLQTGCCRNLAA PGGKTLALLQTGCCRNLAANDLSPSRIARL K T L C R N 1 1 0 0 2 1 0 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 11 0 1291.6377 Q96CB9 Q96CB9 188 198 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes yes 2 0.00010068 151.83 By MS/MS 7 0 1 1 1171600 1171600 0 13568 2121 14365 34614 27663 27663 1 18391 0 TLAQLNPESSLFIIASK RVWYVSNIDGTHIAKTLAQLNPESSLFIIA AQLNPESSLFIIASKTFTTQETITNAETAK K T L S K T 2 0 1 0 0 1 1 0 0 2 3 1 0 1 1 3 1 0 0 0 0 0 17 0 1831.0091 P06744 P06744 195 211 GPI Glucose-6-phosphate isomerase yes yes 2 8.2051E-11 228.03 By MS/MS 6 0 1 1 299380 299380 0 13569 502 14366 34615 27664 27664 1 2058 0 TLASAGGPDNLVLLNPEK YYIHNLVVACEIQVRTLASAGGPDNLVLLN SAGGPDNLVLLNPEKYKAKSRSPGSPVGEG R T L E K Y 2 0 2 1 0 0 1 2 0 0 4 1 0 0 2 1 1 0 0 1 0 0 18 0 1807.968 P35611 P35611 331 348 ADD1 Alpha-adducin yes yes 2 5.1268E-11 247.93 By MS/MS 4 0 1 1 532450 532450 0 13570 827 14367 34616 27665 27665 1 50107 0 TLAVSGLGVVGR STECTLILTEGDSAKTLAVSGLGVVGRDKY SAKTLAVSGLGVVGRDKYGVFPLRGKILNV K T L G R D 1 1 0 0 0 0 0 3 0 0 2 0 0 0 0 1 1 0 0 3 0 0 12 0 1127.6663 P11388 P11388 467 478 TOP2A DNA topoisomerase 2-alpha yes yes 2 6.7644E-06 182.16 By MS/MS 2.5 0.5 1 1 2 436700 436700 0 13571 578 14368 34617;34618 27666 27666 1 37708 0 TLCDYSK YSGEEKTWMWWHNFRTLCDYSKRIAVALEI WMWWHNFRTLCDYSKRIAVALEIGADLPSN R T L S K R 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 7 0 885.39022 O14744 O14744 194 200 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.049703 116.88 By matching By MS/MS 5 0 2 1 1 2012500 1426900 585520 13572 137 14369 34619;34620 27667 27667 1 14311 491710 TLCDYSKR YSGEEKTWMWWHNFRTLCDYSKRIAVALEI MWWHNFRTLCDYSKRIAVALEIGADLPSNH R T L K R I 0 1 0 1 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 8 1 1041.4913 O14744 O14744 194 201 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.021189 116.25 By MS/MS By MS/MS 5 0 2 1 1 347540 0 347540 13573 137 14370 34621;34622 27668;27669 27669 2 0 291860 TLDDLFPLR VKDIRAFDSRFSNIKTLDDLFPLRSMVFML RFSNIKTLDDLFPLRSMVFMLGTPYYGCTG K T L L R S 0 1 0 2 0 0 0 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 9 0 1088.5866 Q8IZH2 Q8IZH2 848 856 XRN1 5-3 exoribonuclease 1 yes yes 2 0.0050657 109.11 By MS/MS 2 0 1 1 139280 139280 0 13574 1893 14371 34623 27670 27670 1 47109 0 TLDLPIYVTR HIKYAVTTGDHGIIRTLDLPIYVTRVKGNN HGIIRTLDLPIYVTRVKGNNVYCLDRECRP R T L T R V 0 1 0 1 0 0 0 0 0 1 2 0 0 0 1 0 2 0 1 1 0 0 10 0 1189.6707 P53621 P53621 563 572 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00028883 150.27 By MS/MS By matching 3 1.29 1 1 2 1 1 5 1 4405000 4318100 86929 13575 1034 14372 34624;34625;34626;34627;34628;34629 27671;27672;27673;27674;27675 27675 5 491860 11065 TLEDPDLNVR PIDPLLKNCIGDFLKTLEDPDLNVRRVALV GDFLKTLEDPDLNVRRVALVTFNSAAHNKP K T L V R R 0 1 1 2 0 0 1 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 10 0 1170.5881 Q86VP6 Q86VP6 1014 1023 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0091069 96.342 By MS/MS 3 0 1 1 1087100 1087100 0 13576 1831 14373 34630 27676 27676 1 19891 0 TLEEAVGNIVK DEFEKEETFTLSTIKTLEEAVGNIVKFLGM STIKTLEEAVGNIVKFLGMHPCERSDKVPD K T L V K F 1 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1171.6449 Q9Y678 Q9Y678 796 806 COPG1 Coatomer subunit gamma-1 yes yes 2 7.5725E-05 154.01 By MS/MS 5 3.74 1 1 1 3 10167000 10167000 0 13577 2933 14374 34631;34632;34633 27677;27678;27679 27678 3 945430 0 TLEEDEEELFK PQFEPIVSLPEQEIKTLEEDEEELFKMRAK QEIKTLEEDEEELFKMRAKLFRFASENDLP K T L F K M 0 0 0 1 0 0 5 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1380.6297 P43487 P43487 40 50 RANBP1 Ran-specific GTPase-activating protein yes yes 2 4.1795E-09 208.11 By MS/MS 8.5 0.5 1 1 2 2444300 2444300 0 13578 899 14375 34634;34635 27680;27681 27680 2 33212 0 TLEEEFAR QELKEWREKLRPRKKTLEEEFARKLQEQEV KLRPRKKTLEEEFARKLQEQEVFFKMTGES K T L A R K 1 1 0 0 0 0 3 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 8 0 993.47673 Q9H2G2 Q9H2G2 1188 1195 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.013109 107.29 By MS/MS 2 0 1 1 624480 624480 0 13579 2429 14376 34636 27682 27682 1 211220 0 TLEEILLER DATDKVNKVGEIHVKTLEEILLERASQKRG GEIHVKTLEEILLERASQKRGELQTKLKTE K T L E R A 0 1 0 0 0 0 3 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1114.6234 O75152 O75152 360 368 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 2 7.1236E-07 186.25 By MS/MS 4.5 0.5 1 1 2 474210 474210 0 13580 299 14377 34637;34638 27683 27683 1 35101 0 TLEGVITR RSMVCTQKSKKTEFKTLEGVITRTKHGEKV SKKTEFKTLEGVITRTKHGEKVSLSSKCAE K T L T R T 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 2 0 0 1 0 0 8 0 887.50763 Q92878 Q92878 113 120 RAD50 DNA repair protein RAD50 yes yes 2 0.025855 93.143 By MS/MS By matching 3 0 2 1 1 4105500 652370 3453200 13581 2074 14378 34639;34640 27684 27684 1 11937 439540 TLELLVCR HQDTRLTQHVPLLKKTLELLVCRVKAMLTL HVPLLKKTLELLVCRVKAMLTLNNCREAFW K T L C R V 0 1 0 0 1 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 8 0 1002.5532 Q9BXW9 Q9BXW9 1363 1370 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.0097649 111.01 By MS/MS 3 0 1 1 164240 164240 0 13582 2362 14379 34641 27685 27685 1 3005.2 0 TLENPEPLLR ATDNIILTVPTANLRTLENPEPLLRLWDEV TANLRTLENPEPLLRLWDEVMQAVARLGAE R T L L R L 0 1 1 0 0 0 2 0 0 0 3 0 0 0 2 0 1 0 0 0 0 0 10 0 1180.6452 Q9Y4C2 Q9Y4C2 680 689 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.0011042 121.6 By MS/MS 4 0 1 1 1266400 1266400 0 13583 2891 14380 34642 27686 27686 1 119180 0 TLEPICDADPSALAK MIIENFEALKSWLSKTLEPICDADPSALAK TLEPICDADPSALAKYVLALVKKDKSEKEL K T L A K Y 3 0 0 2 1 0 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 15 0 1599.7814 Q5T8P6 Q5T8P6 20 34 RBM26 RNA-binding protein 26 yes yes 2 0.0010387 104.59 By MS/MS 3 0 1 1 422820 422820 0 13584 1637 14381 34643 27687 27687 1 7736.4 0 TLEPQELAR APTDVKELSTKEPGRTLEPQELARIAGKVP TKEPGRTLEPQELARIAGKVPGLQNEQKRF R T L A R I 1 1 0 0 0 1 2 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 1055.5611 Q8WWM7 Q8WWM7 517 525 ATXN2L Ataxin-2-like protein yes yes 2 0.012513 96.034 By MS/MS 3.5 0.5 1 1 2 3574200 3574200 0 13585 2036 14382 34644;34645 27688 27688 1 106420 0 TLEPSGEASTSLGR SGSPAAAFSHCVCVRTLEPSGEASTSLGRT RTLEPSGEASTSLGRTHVLLHHCPAFGLLA R T L G R T 1 1 0 0 0 0 2 2 0 0 2 0 0 0 1 3 2 0 0 0 0 0 14 0 1403.6892 Q86YV9 Q86YV9 167 180 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.00045175 147.58 By MS/MS 5 0 1 1 994560 994560 0 13586 1856 14383 34646 27689 27689 1 9974.9 0 TLETLIR SMSSDTARTSPVTARTLETLIRLATAHAKA RTSPVTARTLETLIRLATAHAKARMSKTVD R T L I R L 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 7 0 844.50182 P25205 P25205 617 623 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.017937 114.78 By MS/MS 4 0 1 1 2519400 2519400 0 13587 719 14384 34647 27690 27690 1 237090 0 TLEVEIEPGVR VCDECPNVKLVNEERTLEVEIEPGVRDGME NEERTLEVEIEPGVRDGMEYPFIGEGEPHV R T L V R D 0 1 0 0 0 0 3 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1240.6663 Q9UBS4 Q9UBS4 207 217 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.0029866 125.48 By MS/MS By MS/MS 7 0 2 1 1 6587600 6515500 72098 13588 2704 14385 34648;34649 27691;27692;27693 27693 3 102280 129850 TLFATEDALEVR EYKMGRTKIFIRFPKTLFATEDALEVRRQS FPKTLFATEDALEVRRQSLATKIQAAWRGF K T L V R R 2 1 0 1 0 0 2 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1363.6983 O00159 O00159 722 733 MYO1C Unconventional myosin-Ic yes yes 2 1.4573E-07 202.96 By MS/MS 4 0 1 1 4138600 4138600 0 13589 85 14386 34650 27694 27694 1 389470 0 TLFDILDDR PSTEGLPRAFLQSLRTLFDILDDRRRGCVH FLQSLRTLFDILDDRRRGCVHLREIESRWQ R T L D R R 0 1 0 3 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1106.5608 Q86UD0 Q86UD0 34 42 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 2 0.0071805 105.4 By MS/MS 7 0 1 1 47189 47189 0 13590 1818 14387 34651 27695 27695 1 740.78 0 TLFETIER QEDEKVVNMHPQDFKTLFETIERSKDCAYK MHPQDFKTLFETIERSKDCAYKWLYDETLE K T L E R S 0 1 0 0 0 0 2 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 1007.5288 Q9H5Q4 Q9H5Q4 372 379 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 2 0.052497 80.455 By MS/MS 7 0 1 1 1789500 1789500 0 13591 2453 14388 34652 27696 27696 1 28092 0 TLFLSIPESR ENAGPQNTKSEHVKKTLFLSIPESRSSIED EHVKKTLFLSIPESRSSIEDAQCPGLPDLI K T L S R S 0 1 0 0 0 0 1 0 0 1 2 0 0 1 1 2 1 0 0 0 0 0 10 0 1161.6394 Q15398 Q15398 679 688 DLGAP5 Disks large-associated protein 5 yes yes 2 0.0089633 96.665 By MS/MS 4.5 0.5 1 1 2 836960 836960 0 13592 1509 14389 34653;34654 27697 27697 1 35233 0 TLFNELR FLTLRYSSRRNPYCRTLFNELRIVVEHIIM SRRNPYCRTLFNELRIVVEHIIMKPACPLF R T L L R I 0 1 1 0 0 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 7 0 891.48142 P57088 P57088 206 212 TMEM33 Transmembrane protein 33 yes yes 2 0.016931 117.4 By MS/MS 9 0.816 1 1 1 3 23989000 23989000 0 13593 1078 14390 34655;34656;34657 27698;27699;27700 27700 3 402060 0 TLFQACTDEEAAVVQSCTR HAEDHATQHLEVVLRTLFQACTDEEAAVVQ ACTDEEAAVVQSCTRSAELVGTFVSPEVFL R T L T R S 3 1 0 1 2 2 2 0 0 0 1 0 0 1 0 1 3 0 0 2 0 0 19 0 2184.978 Q86Y56 Q86Y56 404 422 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 7.2584E-34 299.17 By MS/MS 4 0 1 1 742030 742030 0 13594 1850 14391 34658 27701 27701 1 69830 0 TLGDFAAEYAK VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS KAEKTLGDFAAEYAKSNRSTCKGCMEKIEK K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 11 0 1184.5714 P09874 P09874 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 7.0716E-06 175.93 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 24649000 24649000 0 13595 543 14392 34659;34660;34661;34662;34663;34664;34665;34666;34667;34668 27702;27703;27704;27705;27706;27707 27703 5 1676100 0 TLGDLVR FLASTCADKRTIAARTLGDLVRKLGEKILP DKRTIAARTLGDLVRKLGEKILPEIIPILE R T L V R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 7 0 772.4443 Q92616 Q92616 1948 1954 GCN1L1 Translational activator GCN1 yes yes 2 0.02911 105.39 By MS/MS 2.5 1.12 1 1 1 1 4 3149300 3149300 0 13596 2064 14393 34669;34670;34671;34672 27708 27708 1 837490 0 TLGDQTGECR EKSTGYMQQDLDVAKTLGDQTGECRAHGNL LDVAKTLGDQTGECRAHGNLGSAFFSKGNY K T L C R A 0 1 0 1 1 1 1 2 0 0 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1135.4928 Q96AY4 Q96AY4 266 275 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.00098727 123.86 By MS/MS 2 0 1 1 222530 222530 0 13597 2110 14394 34673 27709 27709 1 75269 0 TLGDTGFMPPDK ITHLVIRPNGRVALRTLGDTGFMPPDKITR ALRTLGDTGFMPPDKITRS___________ R T L D K I 0 0 0 2 0 0 0 2 0 0 1 1 1 1 2 0 2 0 0 0 0 0 12 0 1277.5962 Q96HS1 Q96HS1 274 285 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.00026027 145.99 By MS/MS 9.33 0.943 1 2 3 1390200 1390200 0 13598 2168 14395;14396 34674;34675;34676 27710;27711;27712 27710 1025 3 33287 0 TLGDTGFMPPDKITR ITHLVIRPNGRVALRTLGDTGFMPPDKITR TLGDTGFMPPDKITRS______________ R T L T R S 0 1 0 2 0 0 0 2 0 1 1 1 1 1 2 0 3 0 0 0 0 0 15 1 1647.829 Q96HS1 Q96HS1 274 288 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 0.014115 137.09 By MS/MS 8 0 2 2 9643300 9643300 0 13599 2168 14397 34677;34678 27713;27714 27713 1025 2 121750 0 TLGECGFTSQTAR EQRLYKDDQLLDDGKTLGECGFTSQTARPQ GKTLGECGFTSQTARPQAPATVGLAFRADD K T L A R P 1 1 0 0 1 1 1 2 0 0 1 0 0 1 0 1 3 0 0 0 0 0 13 0 1426.6511 Q15370 Q15370 56 68 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.00022203 174.23 By MS/MS 10 0 1 1 411150 411150 0 13600 1503 14398 34679 27715 27715 1 22160 0 TLGILGLGR KWERKKFMGTELNGKTLGILGLGRIGREVA TELNGKTLGILGLGRIGREVATRMQSFGMK K T L G R I 0 1 0 0 0 0 0 3 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 898.56 O43175 O43175 147 155 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00072235 139.88 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 15472000 15441000 30440 13601 195 14399 34680;34681;34682;34683;34684;34685 27716;27717;27718;27719;27720 27716 5 137910 31192 TLGVDLVALATR ECNVRVSRSFPFVSKTLGVDLVALATRVIM VSKTLGVDLVALATRVIMGEEVEPVGLMTG K T L T R V 2 1 0 1 0 0 0 1 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1227.7187 P27708 P27708 1229 1240 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 3.9019E-05 170.89 By MS/MS 1.5 0.5 1 1 2 539750 539750 0 13602 745 14400 34686;34687 27721;27722 27721 2 175980 0 TLGVSFVQAESECR EGVNRSIEEVEADMKTLGVSFVQAESECRH KTLGVSFVQAESECRHSKLSTAEREQALRL K T L C R H 1 1 0 0 1 1 2 1 0 0 1 0 0 1 0 2 1 0 0 2 0 0 14 0 1581.7457 O60826 O60826 357 370 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 3.6799E-17 295.34 By MS/MS 5 0 1 1 1282500 1282500 0 13603 280 14401 34688 27723 27723 1 12863 0 TLGYVDEAGTVK LLLLPEYHQRVEVLRTLGYVDEAGTVKLAG VLRTLGYVDEAGTVKLAGRVACAMSSHELL R T L V K L 1 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 2 0 1 2 0 0 12 0 1251.6347 Q15477 Q15477 1064 1075 SKIV2L Helicase SKI2W yes yes 2 6.8443E-05 161.67 By MS/MS 3 0 1 1 1142600 1142600 0 13604 1516 14402 34689 27724 27724 1 20907 0 TLHGSALFQR LTSLRNVSCEVDMFKTLHGSALFQRGQTQV VDMFKTLHGSALFQRGQTQVLCTVTFDSLE K T L Q R G 1 1 0 0 0 1 0 1 1 0 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1128.604 Q8TCS8 Q8TCS8 379 388 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.053137 70.816 By MS/MS 5 0 1 1 982430 982430 0 13605 1992 14403 34690 27725 27725 1 9853.3 0 TLHSCSVR SEHEDTDKYRQLLVRTLHSCSVRFPDMAAN YRQLLVRTLHSCSVRFPDMAANVIPVLMEF R T L V R F 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 8 0 958.46545 P53618 P53618 386 393 COPB1 Coatomer subunit beta yes yes 2 0.042956 85.161 By MS/MS 4.5 0.5 1 1 2 3547000 3547000 0 13606 1033 14404 34691;34692 27726 27726 1 276380 0 TLHSDDEGTVLDDSR LPDFQDGTKATFHYRTLHSDDEGTVLDDSR TLHSDDEGTVLDDSRARGKPMELIIGKKFK R T L S R A 0 1 0 4 0 0 1 1 1 0 2 0 0 0 0 2 2 0 0 1 0 0 15 0 1658.7384 O00170 O00170 40 54 AIP AH receptor-interacting protein yes yes 3 0.0061243 97.273 By MS/MS 7 0 1 1 622740 622740 0 13607 87 14405 34693 27727 27727 1 9775.9 0 TLIEDEIATILK CGAGSVSDIIRLRNKTLIEDEIATILKSTL RNKTLIEDEIATILKSTLKGLEYLHFMRKI K T L L K S 1 0 0 1 0 0 2 0 0 3 2 1 0 0 0 0 2 0 0 0 0 0 12 0 1357.7704 Q13188 Q13188 117 128 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 2 1.1296E-05 179.57 By MS/MS 6 0 1 1 239910 239910 0 13608 1363 14406 34694 27728 27728 1 1649.2 0 TLIEQIELR TLFYVKFRAAAPKVRTLIEQIELRSEKIPE AAPKVRTLIEQIELRSEKIPEYQQLLNDIH R T L L R S 0 1 0 0 0 1 2 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1113.6394 Q96JB2 Q96JB2 309 317 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 0.0010014 133.99 By MS/MS 5 0.816 1 1 1 3 2841800 2841800 0 13609 2176 14407 34695;34696;34697 27729 27729 1 131490 0 TLIGHVPDQR GQGEPVSQWPCNPEKTLIGHVPDQREIISF CNPEKTLIGHVPDQREIISFGSGYGGNSLL K T L Q R E 0 1 0 1 0 1 0 1 1 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 1134.6146 Q16822 Q16822 235 244 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.028423 82.749 By MS/MS 5.5 0.5 1 1 2 2568300 2568300 0 13610 1560 14408 34698;34699 27730 27730 1 23254 0 TLILEGLEK FYIDQCAVRAATEGRTLILEGLEKAERNVL AATEGRTLILEGLEKAERNVLPVLNNLLEN R T L E K A 0 0 0 0 0 0 2 1 0 1 3 1 0 0 0 0 1 0 0 0 0 0 9 0 1014.5961 A3KMH1 A3KMH1 172 180 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.041815 79.489 By MS/MS 2 0 1 1 427440 427440 0 13611 14 14409 34700 27731 27731 1 144580 0 TLINELVK VQVCEGKKKQTNYLRTLINELVKGILPRSW KQTNYLRTLINELVKGILPRSWSHYTVPAG R T L V K G 0 0 1 0 0 0 1 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 8 0 928.55933 Q14204 Q14204 4450 4457 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0068304 116.37 By MS/MS 2.5 1.12 1 1 1 1 4 5569700 5569700 0 13612 1433 14410 34701;34702;34703;34704 27732;27733;27734 27732 3 1119800 0 TLIQNCGASTIR WPYRAVAQALEVIPRTLIQNCGASTIRLLT IPRTLIQNCGASTIRLLTSLRAKHTQENCE R T L I R L 1 1 1 0 1 1 0 1 0 2 1 0 0 0 0 1 2 0 0 0 0 0 12 0 1332.682 P49368 P49368 450 461 CCT3 T-complex protein 1 subunit gamma yes yes 2 7.2272E-18 255.52 By MS/MS By MS/MS 5.15 2.18 1 1 1 1 3 3 1 1 1 11 2 183610000 183270000 341600 13613 947 14411 34705;34706;34707;34708;34709;34710;34711;34712;34713;34714;34715;34716;34717 27735;27736;27737;27738;27739;27740;27741;27742;27743;27744 27744 10 1785700 333950 TLKIPAMTIAK PANEDQKIGIEIIKRTLKIPAMTIAKNAGV IIKRTLKIPAMTIAKNAGVEGSLIVEKIMQ R T L A K N 2 0 0 0 0 0 0 0 0 2 1 2 1 0 1 0 2 0 0 0 0 0 11 1 1185.7155 P10809 P10809 471 481 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.00012873 183.99 By MS/MS By matching 7.12 1.62 1 3 1 1 1 1 7 1 17920000 17859000 60741 13614 569 14412;14413 34718;34719;34720;34721;34722;34723;34724;34725 27745;27746 27746 248 2 141290 62242 TLKKEDIQK LQERVKKTWTVVDAKTLKKEDIQKETVYCL TVVDAKTLKKEDIQKETVYCLNDDDETEVL K T L Q K E 0 0 0 1 0 1 1 0 0 1 1 3 0 0 0 0 1 0 0 0 0 0 9 2 1101.6394 P13010 P13010 283 291 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3 0.0023074 113.26 By MS/MS 4.5 0.5 1 1 2 787670 787670 0 13615 597 14414 34726;34727 27747 27747 1 38236 0 TLLADQGEIR EDCFFYSLVFDPVQKTLLADQGEIRVGCKY DPVQKTLLADQGEIRVGCKYQAEIPDRLVE K T L I R V 1 1 0 1 0 1 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1114.5982 O94776 O94776 139 148 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.038789 77.744 By MS/MS 5 0 1 1 6232900 6232900 0 13616 365 14415 34728 27748 27748 1 62513 0 TLLAGVIAR QRTGILLYGPPGTGKTLLAGVIARESRMNF PPGTGKTLLAGVIARESRMNFISVKGPELL K T L A R E 2 1 0 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 O43933 O43933 888 896 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0021589 119.29 By MS/MS 3 0 1 1 189400 189400 0 13617 247 14416 34729 27749 27749 1 3465.5 0 TLLAILR REAWASKDATYTSARTLLAILRLSTALARL DATYTSARTLLAILRLSTALARLRMVDVVE R T L L R L 1 1 0 0 0 0 0 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 7 0 798.53272 P33993 P33993 605 611 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.018031 114.54 By MS/MS 4.5 0.5 1 1 2 2958700 2958700 0 13618 808 14417 34730;34731 27750;27751 27750 2 109700 0 TLLAQTLAK EKSNILLLGPTGSGKTLLAQTLAKCLDVPF PTGSGKTLLAQTLAKCLDVPFAICDCTTLT K T L A K C 2 0 0 0 0 1 0 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 9 0 957.58588 O76031 O76031 300 308 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.032788 79.974 By MS/MS 5 0 1 1 5858200 5858200 0 13619 360 14418 34732 27752 27752 1 58755 0 TLLDIDNTR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1059.556 P35527;CON__P35527 P35527 225 233 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00018175 160.82 By MS/MS By MS/MS 5.43 2.8 2 1 4 2 2 2 2 2 2 2 10 11 212270000 177660000 34602000 + 13620 822 14419 34733;34734;34735;34736;34737;34738;34739;34740;34741;34742;34743;34744;34745;34746;34747;34748;34749;34750;34751;34752;34753 27753;27754;27755;27756;27757;27758;27759;27760;27761;27762;27763;27764;27765;27766;27767;27768;27769;27770;27771;27772 27771 20 14073000 45316000 TLLDIDNTRMTLDDFR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA K T L F R I 0 2 1 4 0 0 0 0 0 1 3 0 1 1 0 0 3 0 0 0 0 0 16 1 1937.9517 P35527;CON__P35527 P35527 225 240 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.01878 80.371 By MS/MS 6 0 1 1 1461700 1461700 0 + 13621 822 14420 34754 27773 27773 405 1 10048 0 TLLEALEQR PATAPSTTEVPPPPRTLLEALEQRMERYQV VPPPPRTLLEALEQRMERYQVAAAQAKSKG R T L Q R M 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1071.5924 Q6P1N0 Q6P1N0 347 355 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 6.7675E-05 168.26 By MS/MS 4 0.816 1 1 1 3 592950 592950 0 13622 1701 14421 34755;34756;34757 27774;27775 27774 2 27143 0 TLLEEEYFR LIPGSQFWDASKTLRTLLEEEYFREKLSDG ASKTLRTLLEEEYFREKLSDGIGVMLPQVL R T L F R E 0 1 0 0 0 0 3 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 9 0 1198.587 P52701 P52701 636 644 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.0014448 128.36 By MS/MS 3.5 0.5 1 1 2 394520 394520 0 13623 1020 14422 34758;34759 27776 27776 1 16949 0 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1032.5088 CON__P04264;P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 484 492 KRT1 Keratin, type II cytoskeletal 1 no no 2 7.3126E-05 167.23 By MS/MS By MS/MS 5.7 2.9 2 2 2 1 2 2 2 3 2 2 9 11 319590000 100600000 218990000 + 13624 471;45;34 14423 34760;34761;34762;34763;34764;34765;34766;34767;34768;34769;34770;34771;34772;34773;34774;34775;34776;34777;34778;34779 27777;27778;27779;27780;27781;27782;27783;27784;27785;27786;27787;27788;27789;27790;27791;27792;27793;27794 27790 18 8229800 136710000 TLLENTAITIGR LHQLVEIINRPNTPKTLLENTAITIGRLGY TPKTLLENTAITIGRLGYVCPQEVAPMLQQ K T L G R L 1 1 1 0 0 0 1 1 0 2 2 0 0 0 0 0 3 0 0 0 0 0 12 0 1300.7351 Q92973 Q92973 774 785 TNPO1 Transportin-1 yes yes 2 4.4126E-13 244.27 By MS/MS 5 0.816 1 1 1 3 6874600 6874600 0 13625 2082 14424 34780;34781;34782 27795 27795 1 528100 0 TLLHLGSSAPGK RAVNGETLKTGGDNKTLLHLGSSAPGKEKS DNKTLLHLGSSAPGKEKSETDKETSLVKQT K T L G K E 1 0 0 0 0 0 0 2 1 0 3 1 0 0 1 2 1 0 0 0 0 0 12 0 1179.6612 Q5SW79 Q5SW79 718 729 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0074734 96.342 By MS/MS 2 0 1 1 269820 269820 0 13626 1623 14425 34783 27796 27796 1 91265 0 TLLHTLCK KLKQCKSEFPIRTLKTLLHTLCKLKGPKIL FPIRTLKTLLHTLCKLKGPKILDHLTMIDN K T L C K L 0 0 0 0 1 0 0 0 1 0 3 1 0 0 0 0 2 0 0 0 0 0 8 0 984.54264 Q14008 Q14008 1762 1769 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0043283 128.61 By MS/MS 2 0 1 1 534650 534650 0 13627 1417 14426 34784 27797 27797 1 180840 0 TLLSESSSQSSK IQEALDQLDSLGRKKTLLSESSSQSSKSPS RKKTLLSESSSQSSKSPSLSSKQQHQPSAS K T L S K S 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 6 1 0 0 0 0 0 12 0 1252.6147 Q9UPU5 Q9UPU5 1129 1140 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.035626 90.913 By MS/MS 1 0 1 1 0 0 0 13628 2802 14427 34785 27798 27798 1 0 0 TLLVADPR ASKKEIKDILIQYDRTLLVADPRRCESKKF ILIQYDRTLLVADPRRCESKKFGGPGARAR R T L P R R 1 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 8 0 883.51272 P62249 P62249 118 125 RPS16 40S ribosomal protein S16 yes yes 2 0.025647 93.374 By MS/MS 10 0 1 1 55048000 55048000 0 13629 1145 14428 34786 27799 27799 1 2966900 0 TLLVADPRR ASKKEIKDILIQYDRTLLVADPRRCESKKF LIQYDRTLLVADPRRCESKKFGGPGARARY R T L R R C 1 2 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 9 1 1039.6138 P62249 P62249 118 126 RPS16 40S ribosomal protein S16 yes yes 2;3 0.0078615 124.08 By MS/MS 9.67 0.471 1 2 3 13052000 13052000 0 13630 1145 14429 34787;34788;34789 27800;27801 27801 2 695630 0 TLLVNCQNK LEKYVVLCESPQDKRTLLVNCQNKSLSQSF SPQDKRTLLVNCQNKSLSQSFENLLDEPAY R T L N K S 0 0 2 0 1 1 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 9 0 1088.5648 Q8TC07 Q8TC07 192 200 TBC1D15 TBC1 domain family member 15 yes yes 2 0.0023468 116.9 By MS/MS 5 0 1 1 1277100 1277100 0 13631 1987 14430 34790 27802 27802 1 12808 0 TLMAQSIYGGR RQNISPDKIPWSALKTLMAQSIYGGRVDNE SALKTLMAQSIYGGRVDNEFDQRLLNTFLE K T L G R V 1 1 0 0 0 1 0 2 0 1 1 0 1 0 0 1 1 0 1 0 0 0 11 0 1195.6019 Q14204 Q14204 4245 4255 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00014738 147.3 By MS/MS 1 0 1 1 359620 359620 0 13632 1433 14431 34791 27803 27803 840 1 86658 0 TLNDELEIIEGMK KKVGRKGVITVKDGKTLNDELEIIEGMKFD GKTLNDELEIIEGMKFDRGYISPYFINTSK K T L M K F 0 0 1 1 0 0 3 1 0 2 2 1 1 0 0 0 1 0 0 0 0 0 13 0 1503.7491 P10809 P10809 206 218 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 2.3268E-17 264.3 By MS/MS 5.5 0.5 2 2 4 12421000 12421000 0 13633 569 14432;14433 34792;34793;34794;34795 27804;27805;27806;27807 27807 249 3 86365 0 TLNDELEIIEGMKFDR KKVGRKGVITVKDGKTLNDELEIIEGMKFD LNDELEIIEGMKFDRGYISPYFINTSKGQK K T L D R G 0 1 1 2 0 0 3 1 0 2 2 1 1 1 0 0 1 0 0 0 0 0 16 1 1921.9455 P10809 P10809 206 221 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.0052786 147.39 By MS/MS 6 0 3 3 10951000 10951000 0 13634 569 14434;14435 34796;34797;34798 27808;27809;27810 27810 249 3 75282 0 TLNDMRQEYEQLIAK VNVEINVAPGKDLTKTLNDMRQEYEQLIAK TLNDMRQEYEQLIAKNRKDIENQYETQITQ K T L A K N 1 1 1 1 0 2 2 0 0 1 2 1 1 0 0 0 1 0 1 0 0 0 15 1 1850.9196 P35527;CON__P35527 P35527 322 336 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 0.00088303 156.52 By MS/MS By MS/MS 5.19 2.98 4 4 3 4 3 4 3 4 3 20 12 176320000 146890000 29432000 + 13635 822 14436;14437 34799;34800;34801;34802;34803;34804;34805;34806;34807;34808;34809;34810;34811;34812;34813;34814;34815;34816;34817;34818;34819;34820;34821;34822;34823;34824;34825;34826;34827;34828;34829;34830 27811;27812;27813;27814;27815;27816;27817;27818;27819;27820;27821;27822;27823;27824;27825;27826;27827;27828;27829;27830;27831 27828 408 21 9994400 16359000 TLNEWDSR VMTGANGEVSFINIKTLNEWDSRHCNGVDW VSFINIKTLNEWDSRHCNGVDWRQKLDSQR K T L S R H 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 8 0 1019.4672 O15371 O15371 395 402 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.0002448 168.25 By MS/MS 7 1.41 1 1 1 1 1 5 30958000 30958000 0 13636 185 14438 34831;34832;34833;34834;34835 27832;27833;27834 27833 3 287320 0 TLNIFLTK VSCIHKAGILHRDIKTLNIFLTKANLIKLG ILHRDIKTLNIFLTKANLIKLGDYGLAKKL K T L T K A 0 0 1 0 0 0 0 0 0 1 2 1 0 1 0 0 2 0 0 0 0 0 8 0 948.56442 Q8TD19 Q8TD19 179 186 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.017318 102.62 By MS/MS 4 0 1 1 351720 351720 0 13637 1995 14439 34836 27835 27835 1 33100 0 TLNNKFASFIDK PEIQNVKAQEREQIKTLNNKFASFIDKVRF QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K T L D K V 1 0 2 1 0 0 0 0 0 1 1 2 0 2 0 1 1 0 0 0 0 0 12 1 1396.7351 CON__P13647;P13647;CON__P05787;P05787;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;CON__Q9H552;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q3TTY5;CON__Q5XKE5;Q5XKE5 CON__P35908v2 184 195 KRT5;KRT8;KRT84;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79 no no 2;3 0.016115 144.7 By MS/MS By MS/MS 4.2 1.17 2 1 1 1 3 2 3496100 1749800 1746300 + 13638 55;52;44;56;40;74;48;65;68 14440 34837;34838;34839;34840;34841 27836;27837;27838 27836 3 70201 222280 TLNNLYAEAEK LENRIDRQQFEETVRTLNNLYAEAEKLGGQ ETVRTLNNLYAEAEKLGGQSYLEGCLACLT R T L E K L 2 0 2 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 11 0 1264.6299 Q7Z5G4 Q7Z5G4 49 59 GOLGA7 Golgin subfamily A member 7 yes yes 2 2.6185E-13 238.51 By MS/MS 10 0 1 1 1154400 1154400 0 13639 1797 14441 34842 27839 27839 1 62218 0 TLNPKAEVAR ______________________________ MAAVKTLNPKAEVARAQAALAVNISAARGL K T L A R A 2 1 1 0 0 0 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 10 1 1097.6193 P40227 P40227 6 15 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.031413 89.029 By MS/MS 6.5 0.5 1 1 2 2387800 2387800 0 13640 858 14442 34843;34844 27840 27840 1 18661 0 TLNQLGTPQDSPELR SNIQKITQCSVEIQRTLNQLGTPQDSPELR TLNQLGTPQDSPELRQQLQQKQQYTNQLAK R T L L R Q 0 1 1 1 0 2 1 1 0 0 3 0 0 0 2 1 2 0 0 0 0 0 15 0 1667.8479 O15400 O15400 35 49 STX7 Syntaxin-7 yes yes 2 6.0856E-33 304.89 By MS/MS 7 0 1 1 1876500 1876500 0 13641 189 14443 34845 27841 27841 1 29458 0 TLPETLDPAEYNISPETR ______________________________ ETLDPAEYNISPETRRAQAERLAIRAQLKR R T L T R R 1 1 1 1 0 0 3 0 0 1 2 0 0 0 3 1 3 0 1 0 0 0 18 0 2044.9953 O95168 O95168 13 30 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 2.7727E-11 237.48 By MS/MS 10 0 1 1 418860 418860 0 13642 389 14444 34846 27842;27843 27842 2 22575 0 TLPGSDWTPNAQFITR DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT LPGSDWTPNAQFITRSWLRDGLKPRCITRD R T L T R S 1 1 1 1 0 1 0 1 0 1 1 0 0 1 2 1 3 1 0 0 0 0 16 0 1802.8951 P56192 P56192 468 483 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0002078 177.21 By MS/MS 4 0 1 1 942790 942790 0 13643 1067 14445 34847 27844 27844 1 88723 0 TLPSVSETFPTLR AKSWMNLKSISPSYKTLPSVSETFPTLRSM YKTLPSVSETFPTLRSMIEVLNTDSSPRCL K T L L R S 0 1 0 0 0 0 1 0 0 0 2 0 0 1 2 2 3 0 0 1 0 0 13 0 1446.7718 Q8NBP0 Q8NBP0 830 842 TTC13 Tetratricopeptide repeat protein 13 yes yes 2 0.0014372 118.23 By MS/MS 4.5 0.5 1 1 2 703770 703770 0 13644 1942 14446 34848;34849 27845 27845 1 45810 0 TLQALQIPAAK IGLINEALDEGDAQKTLQALQIPAAKLEGV DAQKTLQALQIPAAKLEGVLAEVAQHYQDT K T L A K L 3 0 0 0 0 2 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1152.6867 P46940 P46940 557 567 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.045352 57.149 By MS/MS 2 0 1 1 132810 132810 0 13645 922 14447 34850 27846 27846 0 44921 0 TLQCLFEK KDGRVSYPKLHLPLKTLQCLFEKQLHMELA KLHLPLKTLQCLFEKQLHMELASRVCVVSV K T L E K Q 0 0 0 0 1 1 1 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 8 0 1037.5216 O00411 O00411 395 402 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0053529 123.86 By MS/MS 3.5 0.5 1 1 2 860100 860100 0 13646 104 14448 34851;34852 27847 27847 1 38529 0 TLQDDFLEFAK SLEVKELSKDSPALKTLQDDFLEFAKDKNF PALKTLQDDFLEFAKDKNFQVLNFVETLPT K T L A K D 1 0 0 2 0 1 1 0 0 0 2 1 0 2 0 0 1 0 0 0 0 0 11 0 1325.6503 Q96JX3 Q96JX3 568 578 SERAC1 Protein SERAC1 yes yes 2 0.00021616 141.71 By MS/MS 5 0 1 1 185930 185930 0 13647 2180 14449 34853 27848 27848 1 1864.8 0 TLQEVTQLSQEAQR CFIAGADINMLAACKTLQEVTQLSQEAQRI KTLQEVTQLSQEAQRIVEKLEKSTKPIVAA K T L Q R I 1 1 0 0 0 4 2 0 0 0 2 0 0 0 0 1 2 0 0 1 0 0 14 0 1629.8322 P40939 P40939 112 125 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 3.451E-122 440.22 By MS/MS 4.67 0.471 1 2 3 35128000 35128000 0 13648 865 14450 34854;34855;34856 27849;27850 27849 2 383450 0 TLQIFNIEMK IMNPASKVIALKAGKTLQIFNIEMKSKMKA LKAGKTLQIFNIEMKSKMKAHTMTDDVTFW K T L M K S 0 0 1 0 0 1 1 0 0 2 1 1 1 1 0 0 1 0 0 0 0 0 10 0 1235.6584 Q00610;P53675 Q00610 87 96 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 1.8398E-07 182.46 By MS/MS 2.5 1.12 1 1 1 1 4 578900 578900 0 13649 1262 14451 34857;34858;34859;34860 27851;27852 27852 756 2 111070 0 TLQIKDSPPEVAGAR SYLLTLSHLAAVAHKTLQIKDSPPEVAGAR TLQIKDSPPEVAGARLHLFKAVRSVLANGM K T L A R L 2 1 0 1 0 1 1 1 0 1 1 1 0 0 2 1 1 0 0 1 0 0 15 1 1580.8522 Q5T160 Q5T160 538 552 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 3 0.0098396 137.21 By MS/MS 6 0 1 1 1475500 1475500 0 13650 1627 14452 34861 27853 27853 1 10143 0 TLQLALDLVSSR ILRVLSTPDLEVRKKTLQLALDLVSSRNVE RKKTLQLALDLVSSRNVEELVIVLKKEVIK K T L S R N 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 2 1 0 0 1 0 0 12 0 1314.7507 P53618 P53618 340 351 COPB1 Coatomer subunit beta yes yes 2 0.00042193 136.01 By MS/MS 4 0 1 1 58470 58470 0 13651 1033 14453 34862 27854 27854 1 5502.4 0 TLQLDNNFEVK SSVKLWDLRKLKNFKTLQLDNNFEVKSLIF KNFKTLQLDNNFEVKSLIFDQSGTYLALGG K T L V K S 0 0 2 1 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 11 0 1319.6721 Q9UMS4 Q9UMS4 429 439 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 6.2725E-07 195.51 By MS/MS By MS/MS 7.33 1.89 2 1 2 1 13770000 13713000 57543 13652 2782 14454 34863;34864;34865 27855;27856;27857 27856 3 100120 58965 TLQLWLDNPK GPQQTQKVFLFIRNRTLQLWLDNPKIQLTF FIRNRTLQLWLDNPKIQLTFEATLQQLEAP R T L P K I 0 0 1 1 0 1 0 0 0 0 3 1 0 0 1 0 1 1 0 0 0 0 10 0 1226.6659 O60341 O60341 217 226 KDM1A Lysine-specific histone demethylase 1A yes yes 2 3.3947E-05 158.79 By MS/MS 4.5 0.5 1 1 2 261890 261890 0 13653 255 14455 34866;34867 27858 27858 1 16921 0 TLQNTPSLHSR HEQSYVGKRSNRVVRTLQNTPSLHSRHWGA RVVRTLQNTPSLHSRHWGAPQQREGRQQQH R T L S R H 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 11 0 1252.6524 Q9Y5Y5 Q9Y5Y5 177 187 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.004343 115.91 By MS/MS 7 0 1 1 567340 567340 0 13654 2928 14456 34868 27859 27859 1 8906.1 0 TLQQNAESR KAIKLLEHSKGAGSKTLQQNAESRFN____ KGAGSKTLQQNAESRFN_____________ K T L S R F 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 9 0 1045.5152 O95816 O95816 201 209 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.00087899 135.55 By MS/MS 8 0.816 1 1 1 3 4048400 4048400 0 13655 428 14457 34869;34870;34871 27860;27861 27860 2 55847 0 TLQQNAESRFN KAIKLLEHSKGAGSKTLQQNAESRFN____ AGSKTLQQNAESRFN_______________ K T L F N - 1 1 2 0 0 2 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 1 1306.6266 O95816 O95816 201 211 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 8.5367E-18 255.39 By MS/MS 8.5 0.5 1 1 2 2218800 2218800 0 13656 428 14458 34872;34873 27862 27862 1 28779 0 TLQSLACGK EIKQATGIEDGELRRTLQSLACGKARVLAK DGELRRTLQSLACGKARVLAKNPKGKDIED R T L G K A 1 0 0 0 1 1 0 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 0 976.50117 Q13620;Q13619 Q13620 781 789 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.022601 87.806 By MS/MS 4 0 1 1 1695700 1695700 0 13657 1405 14459 34874 27863 27863 1 159580 0 TLQTATSLSKPQMIMYK VNPGNPVFSCMLDPKTLQTATSLSKPQMIM QTATSLSKPQMIMYKTNSSHYGEFLPIPQF K T L Y K T 1 0 0 0 0 2 0 0 0 1 2 2 2 0 1 2 3 0 1 0 0 0 17 1 1940.0111 H3BRN8 H3BRN8 44 60 C15orf65 Uncharacterized protein C15orf65 yes yes 3 0.039564 52.112 By MS/MS 2 0 1 1 2333200 2333200 0 13658 77 14460 34875 27864 27864 52;53 1 789200 0 TLQVQAAQFAK AQAYMNQRKLDHEVKTLQVQAAQFAKQTGQ HEVKTLQVQAAQFAKQTGQWIGMVENFNQA K T L A K Q 3 0 0 0 0 3 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 11 0 1203.6612 P78537 P78537 90 100 BLOC1S1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes yes 2 0.00024275 139.38 By MS/MS 10 0 1 1 217090 217090 0 13659 1226 14461 34876 27865 27865 1 11700 0 TLQYLSQGNVVFK ______________________________ RRTLQYLSQGNVVFKDSVKVMTVNYNTHGE R T L F K D 0 0 1 0 0 2 0 1 0 0 2 1 0 1 0 1 1 0 1 2 0 0 13 0 1495.8035 P82663 P82663 12 24 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2 6.1792E-17 254.07 By MS/MS 9 0 1 1 1358700 1358700 0 13660 1230 14462 34877 27866 27866 1 26739 0 TLSADASVNTLPVVVSR ENRLSSLIIGPSKERTLSADASVNTLPVVV SADASVNTLPVVVSREPSVPASCAVSATYE R T L S R E 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 2 0 0 4 0 0 17 0 1727.9418 Q92615 Q92615 566 582 LARP4B La-related protein 4B yes yes 2 0.00012266 185.32 By MS/MS 4 0 1 1 942760 942760 0 13661 2063 14463 34878 27867 27867 1 88720 0 TLSDYNIQK QQRLIFAGKQLEDGRTLSDYNIQKESTLHL QLEDGRTLSDYNIQKESTLHLVLRLRGGAK R T L Q K E 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1080.5451 P62979;P0CG47;P0CG48;P62987 P62979 55 63 RPS27A;UBB;UBC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 2 9.4712E-05 163.15 By MS/MS By MS/MS 4.79 2.96 2 3 1 1 1 1 2 1 1 1 10 4 81474000 80777000 696780 13662 1190;1191 14464 34879;34880;34881;34882;34883;34884;34885;34886;34887;34888;34889;34890;34891;34892 27868;27869;27870;27871;27872;27873;27874;27875;27876;27877 27876 10 11342000 882440 TLSEKNNITQK SSLFSGILKEMDKFKTLSEKNNITQKLLQD DKFKTLSEKNNITQKLLQDFNRFLNTTFSF K T L Q K L 0 0 2 0 0 1 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 11 1 1274.683 P78527 P78527 2825 2835 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 5.7535E-05 156.16 By MS/MS 2 0.816 2 2 2 6 1350900 1350900 0 13663 1225 14465 34893;34894;34895;34896;34897;34898 27878;27879;27880 27880 3 298940 0 TLSFGSDLNYATR ARHCDLQVRIDHTSRTLSFGSDLNYATRED SRTLSFGSDLNYATREDAPIGPHLQSMPSE R T L T R E 1 1 1 1 0 0 0 1 0 0 2 0 0 1 0 2 2 0 1 0 0 0 13 0 1443.6994 Q14152 Q14152 490 502 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 3.3417E-08 221.6 By MS/MS By MS/MS 3 1.05 1 1 5 1 1 8 1 16384000 16179000 205410 13664 1422 14466 34899;34900;34901;34902;34903;34904;34905;34906;34907 27881;27882;27883;27884;27885;27886;27887;27888;27889;27890 27889 10 917850 26146 TLSGMESYCVR APEIELALRLTEYSRTLSGMESYCVRAFAD EYSRTLSGMESYCVRAFADAMEVIPSTLAE R T L V R A 0 1 0 0 1 0 1 1 0 0 1 0 1 0 0 2 1 0 1 1 0 0 11 0 1301.5744 P50991 P50991 442 452 CCT4 T-complex protein 1 subunit delta yes yes 2 8.3383E-07 192.91 By MS/MS By matching 6.86 0.833 3 2 2 6 1 17817000 17733000 84701 13665 985 14467;14468 34908;34909;34910;34911;34912;34913;34914 27891;27892;27893 27891 546 3 142960 86794 TLSHPQQMALLDQTK YFEPLTLAAVGAASKTLSHPQQMALLDQTK TLSHPQQMALLDQTKTLAESALQLLYTAKE K T L T K T 1 0 0 1 0 3 0 0 1 0 3 1 1 0 1 1 2 0 0 0 0 0 15 0 1709.8771 Q9Y490 Q9Y490 1752 1766 TLN1 Talin-1 yes yes 2 0.0081637 93.649 By MS/MS 2 0 1 1 455970 455970 0 13666 2888 14469 34915 27894 27894 1199 1 154230 0 TLSKEEETKK RREERLQAKKEEIIKTLSKEEETKK_____ EEIIKTLSKEEETKK_______________ K T L K K - 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 1 2 0 0 0 0 0 10 2 1191.6347 P84098 P84098 187 196 RPL19 60S ribosomal protein L19 yes yes 2;3 3.5461E-07 173.24 By MS/MS 8.33 0.471 2 1 3 522710 522710 0 13667 1247 14470 34916;34917;34918 27895;27896 27896 2 6941.9 0 TLSNSLQNVIK VDDMIRKSTNLLLTRTLSNSLQNVIKRKNI LLTRTLSNSLQNVIKRKNIGLTELVQIIIN R T L I K R 0 0 2 0 0 1 0 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 11 0 1215.6823 Q9Y2D4 Q9Y2D4 537 547 EXOC6B Exocyst complex component 6B yes yes 2 0.0022185 111.27 By MS/MS 4.5 0.5 1 1 2 1129800 1129800 0 13668 2826 14471 34919;34920 27897 27897 1 67361 0 TLSPEFNER DKNRGTKRRTSQKKRTLSPEFNERFEWELP TSQKKRTLSPEFNERFEWELPLDEAQRRKL R T L E R F 0 1 1 0 0 0 2 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 9 0 1091.5247 Q9BSJ8 Q9BSJ8 1032 1040 ESYT1 Extended synaptotagmin-1 yes yes 2 0.035371 82.279 By MS/MS 3 0 1 1 1229300 1229300 0 13669 2308 14472 34921 27898 27898 1 22492 0 TLSQAIVK APMLPPPKNKEDFEKTLSQAIVKVVIPTER NKEDFEKTLSQAIVKVVIPTERNLLALIHR K T L V K V 1 0 0 0 0 1 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 8 0 858.51747 O15042 O15042 411 418 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2 0.026461 92.47 By MS/MS 3 0 1 1 433000 433000 0 13670 156 14473 34922 27899 27899 1 7922.7 0 TLTDELAALQITGVK LAYCSSKFAAVGFHKTLTDELAALQITGVK TLTDELAALQITGVKTTCLCPNFVNTGFIK K T L V K T 2 0 0 1 0 1 1 1 0 1 3 1 0 0 0 0 3 0 0 1 0 0 15 0 1571.877 Q8NBQ5 Q8NBQ5 198 212 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 3.6352E-08 268.08 By MS/MS 8.5 0.5 1 1 2 566730 566730 0 13671 1943 14474 34923;34924 27900;27901 27900 2 7402.9 0 TLTDLLLR TLKVFQDSKAWENFRTLTDLLLRFEPNLDV KAWENFRTLTDLLLRFEPNLDVEQAEVNFG R T L L R F 0 1 0 1 0 0 0 0 0 0 4 0 0 0 0 0 2 0 0 0 0 0 8 0 943.57023 O76024 O76024 376 383 WFS1 Wolframin yes yes 2 0.01284 107.59 By MS/MS 1.5 0.5 1 1 2 265380 265380 0 13672 359 14475 34925;34926 27902;27903;27904 27904 3 77543 0 TLTEPCPLASESR GQGKKDWSLFRMFSRTLTEPCPLASESRVY SRTLTEPCPLASESRVYVDITTYNQDNETL R T L S R V 1 1 0 0 1 0 2 0 0 0 2 0 0 0 2 2 2 0 0 0 0 0 13 0 1459.6977 Q969N2 Q969N2 267 279 PIGT GPI transamidase component PIG-T yes yes 2 0.00018999 163.9 By MS/MS 5.5 0.5 1 1 2 6844200 6844200 0 13673 2093 14476 34927;34928 27905;27906 27905 2 61244 0 TLTGKEIEIDIEPTDKVER ______________________________ KEIEIDIEPTDKVERIKERVEEKEGIPPQQ K T L E R I 0 1 0 2 0 0 4 1 0 3 1 2 0 0 1 0 3 0 0 1 0 0 19 2 2185.1478 Q15843 Q15843 7 25 NEDD8 NEDD8 yes yes 3 0.0029445 90.872 By MS/MS 4 0 1 1 1136600 1136600 0 13674 1538 14477 34929 27907 27907 1 106960 0 TLTLVDTGIGMTK GKELKIDIIPNPQERTLTLVDTGIGMTKAD ERTLTLVDTGIGMTKADLINNLGTIAKSGT R T L T K A 0 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 4 0 0 1 0 0 13 0 1348.7272 P08238 P08238 83 95 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.8694E-24 284.47 By MS/MS 5 1.1 2 2 1 5 13190000 13190000 0 13675 521 14478 34930;34931;34932;34933;34934 27908;27909;27910;27911 27909 4 1136500 0 TLTPLGREQAELTGLR RHSQYHVDGSLEKDRTLTPLGREQAELTGL LTPLGREQAELTGLRLASLGLKFNKIVHSS R T L L R L 1 2 0 0 0 1 2 2 0 0 4 0 0 0 1 0 3 0 0 0 0 0 16 1 1753.9686 Q96HS1 Q96HS1 119 134 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.0046753 121.04 By MS/MS 8 0 1 1 3383500 3383500 0 13676 2168 14479 34935 27912 27912 1 42716 0 TLTTVQGIADDYDK EDYIHIRIQQRNGRKTLTTVQGIADDYDKK KTLTTVQGIADDYDKKKLVKAFKKKFACNG K T L D K K 1 0 0 3 0 1 0 1 0 1 1 1 0 0 0 0 3 0 1 1 0 0 14 0 1538.7464 P41567;O60739 P41567 43 56 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b yes no 2 1.2152E-07 219.74 By MS/MS 10 0 1 1 1371300 1371300 0 13677 872 14480 34936 27913 27913 1 73907 0 TLTTVQGIADDYDKKK EDYIHIRIQQRNGRKTLTTVQGIADDYDKK LTTVQGIADDYDKKKLVKAFKKKFACNGTV K T L K K L 1 0 0 3 0 1 0 1 0 1 1 3 0 0 0 0 3 0 1 1 0 0 16 2 1794.9363 P41567;O60739 P41567 43 58 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b yes no 3 0.018472 81.632 By MS/MS 10 0 1 1 580060 580060 0 13678 872 14481 34937 27914 27914 1 31263 0 TLTVLHPLK LLEELGINFDHIWQKTLTVLHPLKVADGSI DHIWQKTLTVLHPLKVADGSIMNETDLAGP K T L L K V 0 0 0 0 0 0 0 0 1 0 3 1 0 0 1 0 2 0 0 1 0 0 9 0 1020.6332 Q969M3 Q969M3 107 115 YIPF5 Protein YIPF5 yes yes 2 0.0029404 112.17 By MS/MS 1.5 0.5 1 1 2 500680 500680 0 13679 2092 14482 34938;34939 27915;27916 27916 2 150070 0 TLTYPLDLFK LQNLLCGSGAGVISKTLTYPLDLFKKRLQV GVISKTLTYPLDLFKKRLQVGGFEHARAAF K T L F K K 0 0 0 1 0 0 0 0 0 0 3 1 0 1 1 0 2 0 1 0 0 0 10 0 1209.6645 Q9HC21 Q9HC21 232 241 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0012246 119.27 By MS/MS 8 0 1 1 183230 183230 0 13680 2509 14483 34940 27917;27918 27918 2 2313.3 0 TLVAVKPDGVQR LVRHGSGGPSWTRERTLVAVKPDGVQRRLV RERTLVAVKPDGVQRRLVGDVIQRFERRGF R T L Q R R 1 1 0 1 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 3 0 0 12 1 1281.7405 O00746 O00746 40 51 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 2 0.027658 113.44 By MS/MS 10 0 1 1 0 0 0 13681 118 14484 34941 27919 27919 1 0 0 TLVDIAK ATILKLLDVVHPAAKTLVDIAKSQDAEVGD DVVHPAAKTLVDIAKSQDAEVGDGTTSVTL K T L A K S 1 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 7 0 758.4538 Q99832 Q99832 78 84 CCT7 T-complex protein 1 subunit eta yes yes 2 0.014163 124.59 By MS/MS 7.5 1.12 1 1 1 1 4 40677000 40677000 0 13682 2270 14485 34942;34943;34944;34945 27920 27920 1 294580 0 TLVEDLFADK YGFAIHHAGMTRVDRTLVEDLFADKHIQVL TRVDRTLVEDLFADKHIQVLVSTATLAWGV R T L D K H 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1149.5918 O75643 O75643 795 804 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.017949 87.806 By MS/MS 2 0 1 1 133230 133230 0 13683 340 14486 34946 27921 27921 1 45064 0 TLVGICSEHQSR LLDMGETDLMLAALRTLVGICSEHQSRTVA ALRTLVGICSEHQSRTVATLSILGTRRVVS R T L S R T 0 1 0 0 1 1 1 1 1 1 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1385.6721 Q9H3U1 Q9H3U1 218 229 UNC45A Protein unc-45 homolog A yes yes 2 0.0013131 119.34 By MS/MS 4 0 1 1 1439200 1439200 0 13684 2442 14487 34947 27922 27922 1 135440 0 TLVGSENPPLTVIR IQSLLRANKARDDYKTLVGSENPPLTVIRK KTLVGSENPPLTVIRKFVYLLDQSDLDFQE K T L I R K 0 1 1 0 0 0 1 1 0 1 2 0 0 0 2 1 2 0 0 2 0 0 14 0 1494.8406 Q13576 Q13576 772 785 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.00047334 167.84 By MS/MS 3 0 1 1 148520 148520 0 13685 1399 14488 34948 27923 27923 1 2717.5 0 TLVLFPNIDAGSK MFELTLDALISFNKRTLVLFPNIDAGSKEM KRTLVLFPNIDAGSKEMVRVMRKKGIEHHP R T L S K E 1 0 1 1 0 0 0 1 0 1 2 1 0 1 1 1 1 0 0 1 0 0 13 0 1373.7555 Q9Y223 Q9Y223 247 259 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.00029037 164.48 By MS/MS 5 0 1 1 659550 659550 0 13686 2808 14489 34949 27924;27925 27925 2 6615 0 TLVLLDNLNVR LLLPLLGAVCASGPRTLVLLDNLNVRETHS SGPRTLVLLDNLNVRETHSLFFRSLKDRGF R T L V R E 0 1 2 1 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 2 0 0 11 0 1268.7452 P39656 P39656 47 57 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 1.3125E-25 280.96 By MS/MS 7.33 1.25 1 1 1 3 14466000 14466000 0 13687 855 14490 34950;34951;34952 27926;27927;27928;27929 27926 4 102390 0 TLVLLLGVDPSR ASLCGKSGRLALAHKTLVLLLGVDPSRQLD AHKTLVLLLGVDPSRQLDHPLPTVHPQVTY K T L S R Q 0 1 0 1 0 0 0 1 0 0 4 0 0 0 1 1 1 0 0 2 0 0 12 0 1281.7656 P42345 P42345 1672 1683 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.010924 110.54 By MS/MS 2 0 1 1 0 0 0 13688 879 14491 34953 27930 27930 1 0 0 TLVLLMGK GGAPTFNVTVTKTDKTLVLLMGKEGVHGGL TVTKTDKTLVLLMGKEGVHGGLINKKCYEM K T L G K E 0 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 1 0 0 1 0 0 8 0 873.53576 P07737;CON__P02584 P07737 109 116 PFN1 Profilin-1 yes no 2 0.031066 89.296 By MS/MS 10 0 1 1 1006300 1006300 0 13689 510 14492 34954 27931 27931 213 1 54235 0 TLVNPANVTFK LVPLMFGSLTVEKLKTLVNPANVTFKTYEG EKLKTLVNPANVTFKTYEGMMHSSCQQEMM K T L F K T 1 0 2 0 0 0 0 0 0 0 1 1 0 1 1 0 2 0 0 2 0 0 11 0 1202.6659 O75608 O75608 191 201 LYPLA1 Acyl-protein thioesterase 1 yes yes 2 0.0096395 91.658 By MS/MS 9 0 1 1 245700 245700 0 13690 338 14493 34955 27932 27932 1 4835.5 0 TLVPHYCELVGANPK LPRAAALRNPGKIPKTLVPHYCELVGANPK TLVPHYCELVGANPKVRPNPARFLQNCRAP K T L P K V 1 0 1 0 1 0 1 1 1 0 2 1 0 0 2 0 1 0 1 2 0 0 15 0 1696.8607 Q96KG9 Q96KG9 235 249 SCYL1 N-terminal kinase-like protein yes yes 3 0.00037196 143.42 By MS/MS 4.5 0.5 1 1 2 1510100 1510100 0 13691 2188 14494 34956;34957 27933 27933 1 110370 0 TLVQILTEPR GRLPVVVPLHSLDEKTLVQILTEPRNAVIP SLDEKTLVQILTEPRNAVIPQYQALFSMDK K T L P R N 0 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 2 0 0 1 0 0 10 0 1168.6816 O76031 O76031 513 522 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 8.6567E-05 154.84 By MS/MS 5.75 0.829 2 1 1 4 6365300 6365300 0 13692 360 14495 34958;34959;34960;34961 27934;27935 27934 2 61265 0 TLYNNQPIDFLK LYTVEYLSNMVGGRKTLYNNQPIDFLKKMV GRKTLYNNQPIDFLKKMVAASIKDGEAVWF K T L L K K 0 0 2 1 0 1 0 0 0 1 2 1 0 1 1 0 1 0 1 0 0 0 12 0 1464.7613 Q13867 Q13867 298 309 BLMH Bleomycin hydrolase yes yes 2 0.002579 133.89 By MS/MS 3 0 1 1 70097 0 70097 13693 1411 14496 34962 27936 27936 1 0 8922.3 TLYVGNLSR ______________________________ DDGQPRTLYVGNLSRDVTEVLILQLFSQIG R T L S R D 0 1 1 0 0 0 0 1 0 0 2 0 0 0 0 1 1 0 1 1 0 0 9 0 1021.5556 Q01085;P31483 Q01085 10 18 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 yes no 2 0.026338 89.029 By MS/MS 7 0 1 1 2250100 2250100 0 13694 1266 14497 34963 27937 27937 1 35323 0 TMASQVSIR LSKEGLIERTERMKKTMASQVSIRRIKDYD TERMKKTMASQVSIRRIKDYDANFKIKDFP K T M I R R 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 1 0 0 1 0 0 9 0 991.51206 Q9BRJ2 Q9BRJ2 115 123 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.017222 89.886 By MS/MS 8 0 1 1 565600 565600 0 13695 2295 14498 34964 27938 27938 1067 1 7140.7 0 TMCAVLGLVAR SCALPDSVLRRFVVRTMCAVLGLVARQEDS FVVRTMCAVLGLVARQEDSGLRDHSVRVLI R T M A R Q 2 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 2 0 0 11 0 1189.6311 Q9Y679 Q9Y679 68 78 AUP1 Ancient ubiquitous protein 1 yes yes 2 6.4658E-07 215.38 By MS/MS 7 0 2 2 1535600 1535600 0 13696 2934 14499;14500 34965;34966 27939;27940 27940 1214 2 24106 0 TMFENVTR ______________________________ ______________________________ M T M T R A 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 1 0 0 8 0 996.46987 Q96QA5 Q96QA5 2 9 GSDMA Gasdermin-A yes yes 2 0.013848 96.668 By MS/MS 3.78 2.48 2 2 1 1 1 1 1 9 507970 0 507970 13697 2214 14501 34967;34968;34969;34970;34971;34972;34973;34974;34975 27941;27942;27943;27944;27945 27943 1036 4 0 710730 TMGVMFTPLTVK SIKAYVSTLMGVPGRTMGVMFTPLTVKYAY PGRTMGVMFTPLTVKYAYYDTERIGVDLIM R T M V K Y 0 0 0 0 0 0 0 1 0 0 1 1 2 1 1 0 3 0 0 2 0 0 12 0 1323.6931 O00303 O00303 227 238 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 1.6355E-10 225.67 By MS/MS 6.8 0.748 4 4 2 10 27942000 27942000 0 13698 99 14502;14503;14504 34976;34977;34978;34979;34980;34981;34982;34983;34984;34985 27946;27947;27948;27949;27950;27951;27952 27951 63;64 7 313170 0 TMIQSPSGVILQEAADVHAR YTSGLETLLNIPIKRTMIQSPSGVILQEAA PSGVILQEAADVHARYIELLTRSGDYYRFL R T M A R Y 3 1 0 1 0 2 1 1 1 2 1 0 1 0 1 2 1 0 0 2 0 0 20 0 2122.0841 P15924 P15924 983 1002 DSP Desmoplakin yes yes 3 0.0043363 88.574 By MS/MS 3 0 1 1 135700 0 135700 13699 628 14505 34986 27953 27953 306 1 0 17273 TMLELLNQLDGFDSR KRYDSNSGGEREIQRTMLELLNQLDGFDSR TMLELLNQLDGFDSRGDVKVIMATNRIETL R T M S R G 0 1 1 2 0 1 1 1 0 0 4 0 1 1 0 1 1 0 0 0 0 0 15 0 1750.856 P62191 P62191 308 322 PSMC1 26S protease regulatory subunit 4 yes yes 2 3.9669E-08 224.43 By MS/MS 6 0 1 1 306180 306180 0 13700 1141 14506 34987 27954 27954 641 1 2104.8 0 TMLELLNQLDGFEATK SRLEGGSGGDSEVQRTMLELLNQLDGFEAT MLELLNQLDGFEATKNIKVIMATNRIDILD R T M T K N 1 0 1 1 0 1 2 1 0 0 4 1 1 1 0 0 2 0 0 0 0 0 16 0 1821.9183 P62195 P62195 272 287 PSMC5 26S protease regulatory subunit 8 yes yes 2 1.1035E-16 258.23 By MS/MS 7 0 1 1 110410 110410 0 13701 1142 14507 34988 27955;27956;27957 27956 644 3 1733.3 0 TMLESAGGLIQTAR PEGRAAMEPIVISAKTMLESAGGLIQTARA KTMLESAGGLIQTARALAVNPRDPPSWSVL K T M A R A 2 1 0 0 0 1 1 2 0 1 2 0 1 0 0 1 2 0 0 0 0 0 14 0 1446.7501 Q9Y490 Q9Y490 1605 1618 TLN1 Talin-1 yes yes 2 0.00011283 188.91 By MS/MS 2.33 0.471 2 1 3 1686300 1686300 0 13702 2888 14508;14509 34989;34990;34991 27958;27959;27960 27960 1200 3 518360 0 TMMEDFRK LSQSKASKELVERRRTMMEDFRKYRKMAQE ELVERRRTMMEDFRKYRKMAQELYMEQKNE R T M R K Y 0 1 0 1 0 0 1 0 0 0 0 1 2 1 0 0 1 0 0 0 0 0 8 1 1056.4732 P55884 P55884 752 759 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.051502 105.14 By MS/MS 4 0 1 1 2785300 2785300 0 13703 1065 14510 34992 27961 27961 1 262110 0 TMQNLEIELQSQLSMK ELVQSGKSEISELRRTMQNLEIELQSQLSM MQNLEIELQSQLSMKASLENSLEETKGRYC R T M M K A 0 0 1 0 0 3 2 0 0 1 3 1 2 0 0 2 1 0 0 0 0 0 16 0 1891.9383 CON__P02533;P02533 CON__P02533 337 352 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 9.1856E-05 155.14 By matching By MS/MS 3.5 0.5 2 2 2 2 1462200 1259800 202450 + 13704 39 14511 34993;34994;34995;34996 27962;27963;27964 27964 23;24 3 118560 25768 TMQNTSDLDTAR RALMGSPQLVAAVVRTMQNTSDLDTARCTT VVRTMQNTSDLDTARCTTSILHNLSHHREG R T M A R C 1 1 1 2 0 1 0 0 0 0 1 0 1 0 0 1 3 0 0 0 0 0 12 0 1351.6038 P14923 P14923 192 203 JUP Junction plakoglobin yes yes 2 0.00024659 158.06 By MS/MS By MS/MS 3 1.07 1 1 2 3 1 6 2488100 799410 1688700 13705 621 14512;14513 34997;34998;34999;35000;35001;35002;35003 27965;27966 27965 296 2 75229 665420 TMTLFSALR EHKPLVLCGPPGSGKTMTLFSALRALPDME PPGSGKTMTLFSALRALPDMEVVGLNFSSA K T M L R A 1 1 0 0 0 0 0 0 0 0 2 0 1 1 0 1 2 0 0 0 0 0 9 0 1038.5532 Q14204 Q14204 2602 2610 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.41E-07 194.9 By MS/MS 2 0.816 1 1 1 3 1953200 1953200 0 13706 1433 14514 35004;35005;35006 27967;27968;27969 27968 841 3 559950 0 TMVQLFEK RRLSALHPPEKHGGRTMVQLFEKGYGKDAA PEKHGGRTMVQLFEKGYGKDAAGIAMEAIA R T M E K G 0 0 0 0 0 1 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 8 0 994.51575 P08240 P08240 485 492 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.01366 106.68 By MS/MS 5 0 1 1 813880 813880 0 13707 522 14515 35007 27970 27970 1 8162.8 0 TMYLLGYIPK YYVGGEIVTIAHLDRTMYLLGYIPKDNRLY AHLDRTMYLLGYIPKDNRLYLGDKELNIIS R T M P K D 0 0 0 0 0 0 0 1 0 1 2 1 1 0 1 0 1 0 2 0 0 0 10 0 1197.6468 P35606 P35606 560 569 COPB2 Coatomer subunit beta yes yes 2 0.0070416 100.02 By MS/MS 1.5 0.5 1 1 2 52031 52031 0 13708 826 14516 35008;35009 27971;27972 27972 418 2 12538 0 TNAENEFVTIK VEDYRNKYEDEINKRTNAENEFVTIKKDVD INKRTNAENEFVTIKKDVDGAYMTKVDLQA R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 11 0 1264.6299 CON__P04264;P04264 P04264 278 288 KRT1 Keratin, type II cytoskeletal 1 no no 2 5.2127E-13 225.93 By MS/MS By MS/MS 5.1 2.91 4 3 4 3 3 3 2 3 2 3 10 20 238330000 126460000 111880000 + 13709 471;45 14517 35010;35011;35012;35013;35014;35015;35016;35017;35018;35019;35020;35021;35022;35023;35024;35025;35026;35027;35028;35029;35030;35031;35032;35033;35034;35035;35036;35037;35038;35039 27973;27974;27975;27976;27977;27978;27979;27980;27981;27982;27983;27984;27985;27986;27987;27988;27989;27990;27991;27992;27993;27994;27995;27996;27997;27998;27999;28000;28001;28002 27981 29 10650000 69185000 TNAENEFVTIKK VEDYRNKYEDEINKRTNAENEFVTIKKDVD NKRTNAENEFVTIKKDVDGAYMTKVDLQAK R T N K K D 1 0 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 0 12 1 1392.7249 CON__P04264;P04264 P04264 278 289 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 2.019E-24 279.9 By MS/MS By MS/MS 5.02 2.8 4 5 8 5 3 4 3 4 4 3 20 23 1332200000 775650000 556530000 + 13710 471;45 14518 35040;35041;35042;35043;35044;35045;35046;35047;35048;35049;35050;35051;35052;35053;35054;35055;35056;35057;35058;35059;35060;35061;35062;35063;35064;35065;35066;35067;35068;35069;35070;35071;35072;35073;35074;35075;35076;35077;35078;35079;35080;35081;35082 28003;28004;28005;28006;28007;28008;28009;28010;28011;28012;28013;28014;28015;28016;28017;28018;28019;28020;28021;28022;28023;28024;28025;28026;28027;28028;28029;28030;28031;28032;28033;28034;28035;28036;28037;28038;28039;28040;28041;28042;28043;28044;28045;28046;28047 28032 44 59724000 252140000 TNDEVIHGIFK ISFNFWYRLGEHLYKTNDEVIHGIFKAYIQ HLYKTNDEVIHGIFKAYIQRLLHALARHCQ K T N F K A 0 0 1 1 0 0 1 1 1 2 0 1 0 1 0 0 1 0 0 1 0 0 11 0 1271.651 Q9Y5L0 Q9Y5L0 356 366 TNPO3 Transportin-3 yes yes 2;3 6.1438E-05 155.26 By MS/MS 4 0 2 2 2037800 2037800 0 13711 2915 14519 35083;35084 28048;28049 28048 2 191770 0 TNDQDGLISGILR IYEQEGVYIHSSCGKTNDQDGLISGILRVL GKTNDQDGLISGILRVLEKDAEVIVDWRPL K T N L R V 0 1 1 2 0 1 0 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 13 0 1400.726 Q8TC07 Q8TC07 27 39 TBC1D15 TBC1 domain family member 15 yes yes 2 1.6926E-07 204.32 By MS/MS 4.5 0.5 1 1 2 2574200 2574200 0 13712 1987 14520 35085;35086 28050 28050 1 30801 0 TNEAQAIETAR NPDDPLANDVAEQWKTNEAQAIETARAWTR EQWKTNEAQAIETARAWTRLYAMNNI____ K T N A R A 3 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 11 0 1202.5891 P61088;Q5JXB2 P61088 131 141 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 2 4.9367E-13 229.82 By MS/MS 10 0 1 1 1072900 1072900 0 13713 1109 14521 35087 28051 28051 1 57825 0 TNELLQIIGK LAKPARIVAGHEPERTNELLQIIGKCCLNK HEPERTNELLQIIGKCCLNKLSSDDAVRRV R T N G K C 0 0 1 0 0 1 1 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1127.655 Q8TDR0 Q8TDR0 104 113 TRAF3IP1 TRAF3-interacting protein 1 yes yes 2 0.004827 105.98 By MS/MS 4 0 1 1 103780 103780 0 13714 1997 14522 35088 28052 28052 1 9766.5 0 TNFISSHTEKPVR LGEERGPVLEVIVSRTNFISSHTEKPVRIV SRTNFISSHTEKPVRIVGLSTALANARDLA R T N V R I 0 1 1 0 0 0 1 0 1 1 0 1 0 1 1 2 2 0 0 1 0 0 13 1 1514.7841 Q8N3C0 Q8N3C0 1473 1485 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 3 0.027996 71.268 By MS/MS 1.5 0.5 1 1 2 458560 458560 0 13715 1911 14523 35089;35090 28053 28053 1 137270 0 TNFYAEQGGQASDR ASVGKGQRCGLLLDRTNFYAEQGGQASDRG RTNFYAEQGGQASDRGYLVRAGQEDVLFPV R T N D R G 2 1 1 1 0 2 1 2 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1542.6699 Q5JTZ9 Q5JTZ9 562 575 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 6.3535E-30 281.32 By MS/MS 4.5 0.5 1 1 2 3672300 3672300 0 13716 1613 14524 35091;35092 28054;28055 28055 1 289070 0 TNHIETLGK YDILMEKLSVMLSTRTNHIETLGKLREELG VMLSTRTNHIETLGKLREELGLCERTFKRL R T N G K L 0 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 2 0 0 0 0 0 9 0 1011.5349 Q12789 Q12789 270 278 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2;3 0.0061504 107.21 By MS/MS 2 0 2 2 619020 619020 0 13717 1328 14525 35093;35094 28056;28057 28056 2 209380 0 TNHIGHTGYLNTVTVSPDGSLCASGGK DKLVKVWNLANCKLKTNHIGHTGYLNTVTV VTVSPDGSLCASGGKDGQAMLWDLNEGKHL K T N G K D 1 0 2 1 1 0 0 5 2 1 2 1 0 0 1 3 4 0 1 2 0 0 27 0 2742.3031 P63244 P63244 186 212 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 3 1.0004E-09 114.64 By MS/MS 8 0 1 1 942380 942380 0 13718 1202 14526 35095 28058 28058 1 11897 0 TNHIYVSSDDIK EWRVRAISAANLHLRTNHIYVSSDDIKETG HLRTNHIYVSSDDIKETGYTYILPKNVLKK R T N I K E 0 0 1 2 0 0 0 0 1 2 0 1 0 0 0 2 1 0 1 1 0 0 12 0 1390.6729 Q6P2Q9 Q6P2Q9 2087 2098 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2;3 0.0012756 120.03 By MS/MS 2 0.707 1 2 1 4 1869100 1869100 0 13719 1708 14527 35096;35097;35098;35099 28059;28060 28060 2 566420 0 TNIAIFCETR FNFGNGLQMLGQKPKTNIAIFCETRAEWMI GQKPKTNIAIFCETRAEWMIAAQACFMYNF K T N T R A 1 1 1 0 1 0 1 0 0 2 0 0 0 1 0 0 2 0 0 0 0 0 10 0 1223.5969 O95573 O95573 160 169 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 4.3224E-08 198.62 By MS/MS 3.2 1.6 1 1 1 2 5 7543700 7543700 0 13720 417 14528 35100;35101;35102;35103;35104 28061;28062;28063 28062 3 139360 0 TNIFQIQR LSWLSVSMDAALGCRTNIFQIQRSGGRKHT DAALGCRTNIFQIQRSGGRKHTEKHASGGS R T N Q R S 0 1 1 0 0 2 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 8 0 1018.556 Q7Z6Z7 Q7Z6Z7 3298 3305 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0039692 130.27 By MS/MS 2 0.816 1 1 1 3 675620 675620 0 13721 1802 14529 35105;35106;35107 28064;28065 28064 2 154420 0 TNIIPVLEDAR SHRAGRDLVNVAKKRTNIIPVLEDARHPLK AKKRTNIIPVLEDARHPLKYRMLIGMVDVI R T N A R H 1 1 1 1 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1239.6823 A6NHQ2 A6NHQ2 220 230 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 yes yes 2 0.010835 90.434 By MS/MS 7 0 1 1 591700 591700 0 13722 23 14530 35108 28066 28066 1 9288.7 0 TNIIRDYLEDQQGGR EDTERANSMGLFLQKTNIIRDYLEDQQGGR TNIIRDYLEDQQGGREFWPQEVWSRYVKKL K T N G R E 0 2 1 2 0 2 1 2 0 2 1 0 0 0 0 0 1 0 1 0 0 0 15 1 1776.8755 P37268 P37268 214 228 FDFT1 Squalene synthase yes yes 2 0.011714 110.98 By MS/MS 7 0 1 1 866110 866110 0 13723 845 14531 35109 28067 28067 1 13596 0 TNLEDVGR GKYGALVICETSEQKTNLEDVGRRLGQHVV CETSEQKTNLEDVGRRLGQHVVGMAPLSVG K T N G R R 0 1 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 902.44576 P43897 P43897 247 254 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.011474 109.11 By MS/MS 7.5 0.5 1 1 2 3699800 3699800 0 13724 901 14532 35110;35111 28068 28068 1 47110 0 TNLIFLSGNR QVIKILGTEKGKKNRTNLIFLSGNRVLKWM GKKNRTNLIFLSGNRVLKWMERSHGTEKAL R T N N R V 0 1 2 0 0 0 0 1 0 1 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1133.6193 Q9BTE6 Q9BTE6 236 245 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 2 0.028255 82.831 By MS/MS 7 0.816 1 1 1 3 1622100 1622100 0 13725 2316 14533 35112;35113;35114 28069 28069 1 15082 0 TNLLDELPQSVLK WEQNLKDPVAVQTAKTNLLDELPQSVLKWA AKTNLLDELPQSVLKWAPSGSSCCEIAQFL K T N L K W 0 0 1 1 0 1 1 0 0 0 4 1 0 0 1 1 1 0 0 1 0 0 13 0 1468.8137 Q86Y07 Q86Y07 265 277 VRK2 Serine/threonine-protein kinase VRK2 yes yes 2 1.439E-11 236.08 By MS/MS 7 0.816 1 1 1 3 2717700 2717700 0 13726 1849 14534 35115;35116;35117 28070;28071 28070 1 19594 0 TNLLQVCER LAKEVAKQCTDKRIRTNLLQVCERIPTIST TDKRIRTNLLQVCERIPTISTQLKILSTVK R T N E R I 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1131.5706 P18206 P18206 1047 1055 VCL Vinculin yes yes 2 0.040475 86.882 By MS/MS 3 0 1 1 893690 893690 0 13727 653 14535 35118 28072 28072 0 16352 0 TNLPIFK GVGRGRFTTYEIRVKTNLPIFKLKESTVRR TTYEIRVKTNLPIFKLKESTVRRRYSDFEW K T N F K L 0 0 1 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 0 0 0 0 7 0 831.48544 O60493;Q9UMY4 O60493 55 61 SNX3;SNX12 Sorting nexin-3;Sorting nexin-12 yes no 2 0.030445 128.57 By MS/MS 9 0 1 1 0 0 0 13728 258 14536 35119 28073 28073 1 0 0 TNLQPLESTQSQDF GTFLTQALNHMYKLRTNLQPLESTQSQDF_ RTNLQPLESTQSQDF_______________ R T N D F - 0 0 1 1 0 3 1 0 0 0 2 0 0 1 1 2 2 0 0 0 0 0 14 0 1606.7475 Q9Y248 Q9Y248 172 185 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.0029619 109.72 By MS/MS 9 0 1 1 353400 353400 0 13729 2813 14537 35120 28074 28074 1 6955 0 TNLSVHEDKNRVPYVK EIYLDKIRDLLDVSKTNLSVHEDKNRVPYV NLSVHEDKNRVPYVKGCTERFVCSPDEVMD K T N V K G 0 1 2 1 0 0 1 0 1 0 1 2 0 0 1 1 1 0 1 3 0 0 16 2 1898.001 P33176 P33176 151 166 KIF5B Kinesin-1 heavy chain yes yes 3 0.02 80.371 By MS/MS 4 0 1 1 543330 543330 0 13730 800 14538 35121 28075 28075 1 51131 0 TNNVSEHEDTDKYR NVEELVIVLKKEVIKTNNVSEHEDTDKYRQ KTNNVSEHEDTDKYRQLLVRTLHSCSVRFP K T N Y R Q 0 1 2 2 0 0 2 0 1 0 0 1 0 0 0 1 2 0 1 1 0 0 14 1 1706.7496 P53618 P53618 367 380 COPB1 Coatomer subunit beta yes yes 3 0.00047326 172.58 By MS/MS By matching 3.2 1.47 1 1 2 1 4 1 11854000 11836000 17458 13731 1033 14539 35122;35123;35124;35125;35126 28076;28077;28078 28077 3 887700 37198 TNPEIQSTLR RMAEAELVQEGKARKTNPEIQSTLRKRLYL GKARKTNPEIQSTLRKRLYLQ_________ K T N L R K 0 1 1 0 0 1 1 0 0 1 1 0 0 0 1 1 2 0 0 0 0 0 10 0 1157.6041 P31944 P31944 227 236 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2 0.022329 100.82 By matching By MS/MS 9.25 0.829 1 1 2 1 3 725600 321060 404540 13732 792 14540 35127;35128;35129;35130 28079 28079 1 17304 566250 TNPSVSSLLQR VLALETLTCYETLSKTNPSVSSLLQRAHEQ TLSKTNPSVSSLLQRAHEQRFLKSIAEGIG K T N Q R A 0 1 1 0 0 1 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 11 0 1200.6463 P57678 P57678 1018 1028 GEMIN4 Gem-associated protein 4 yes yes 2 0.012736 98.754 By MS/MS 4 0 1 1 1223900 1223900 0 13733 1079 14541 35131 28080 28080 1 115180 0 TNQELQEINR LGTDEDSLIEIICSRTNQELQEINRVYKEM IICSRTNQELQEINRVYKEMYKTDLEKDII R T N N R V 0 1 2 0 0 2 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1243.6157 P07355;A6NMY6 P07355 136 145 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 9.775E-12 210.64 By MS/MS By MS/MS 5.55 2.81 1 1 1 2 1 2 1 1 1 2 9 5278500 2439500 2838900 13734 508 14542 35132;35133;35134;35135;35136;35137;35138;35139;35140;35141;35142 28081;28082;28083;28084;28085;28086;28087;28088;28089;28090;28091;28092 28084 12 83922 1429100 TNQVQEENEVLR MPVPVILNFDAECQRTNQVQEENEVLRQKL CQRTNQVQEENEVLRQKLFALQAEIHRLKK R T N L R Q 0 1 2 0 0 2 3 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 12 0 1457.711 A4D1P6 A4D1P6 185 196 WDR91 WD repeat-containing protein 91 yes yes 2 1.0136E-08 215.04 By MS/MS 3.5 1.12 1 1 1 1 4 2693100 2693100 0 13735 16 14543 35143;35144;35145;35146 28093 28093 1 269540 0 TNRPPLSLSR STFNQVVLKRLFMSRTNRPPLSLSRMIRKM LFMSRTNRPPLSLSRMIRKMKLPGRENKTA R T N S R M 0 2 1 0 0 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 1 1139.6411 Q07020 Q07020 56 65 RPL18 60S ribosomal protein L18 yes yes 3 0.0090594 89.561 By MS/MS By matching 8.67 0.471 1 2 2 1 5043200 4807000 236280 13736 1298 14544 35147;35148;35149 28094;28095 28094 2 87000 538790 TNSILFYGR FCCNHPFLFFIRQNKTNSILFYGRFSSP__ FIRQNKTNSILFYGRFSSP___________ K T N G R F 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 1 1 0 1 0 0 0 9 0 1069.5556 P48594;P29508 P48594 378 386 SERPINB4;SERPINB3 Serpin B4;Serpin B3 yes no 2 3.1678E-05 181.55 By MS/MS 2 0.816 1 1 1 3 700790 0 700790 13737 759 14545 35150;35151;35152 28096 28096 1 0 603410 TNSTFNQVVLK YLRLLVKLYRFLARRTNSTFNQVVLKRLFM LARRTNSTFNQVVLKRLFMSRTNRPPLSLS R T N L K R 0 0 2 0 0 1 0 0 0 0 1 1 0 1 0 1 2 0 0 2 0 0 11 0 1249.6667 Q07020 Q07020 39 49 RPL18 60S ribosomal protein L18 yes yes 2 0.00036595 134.23 By MS/MS By matching 8.67 0.471 1 2 2 1 4196800 4163100 33789 13738 1298 14546 35153;35154;35155 28097;28098 28098 2 66349 77049 TNSTFNQVVLKR YLRLLVKLYRFLARRTNSTFNQVVLKRLFM ARRTNSTFNQVVLKRLFMSRTNRPPLSLSR R T N K R L 0 1 2 0 0 1 0 0 0 0 1 1 0 1 0 1 2 0 0 2 0 0 12 1 1405.7678 Q07020 Q07020 39 50 RPL18 60S ribosomal protein L18 yes yes 3 0.033753 69.672 By MS/MS 8 0 1 1 822610 822610 0 13739 1298 14547 35156 28099 28099 1 10385 0 TNTCGELR SSQRRIPEFSSFVVRTNTCGELRSSHLGQE FSSFVVRTNTCGELRSSHLGQEVTLCGWIQ R T N L R S 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 0 0 8 0 949.42873 Q6PI48 Q6PI48 51 58 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.020914 98.629 By MS/MS 5 0 1 1 1683700 1683700 0 13740 1717 14548 35157 28100 28100 1 16887 0 TNTPVKEDWNVR PELLTHSTTEVTQPRTNTPVKEDWNVRITK QPRTNTPVKEDWNVRITKLRKQVEEIFNLK R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.002414 107.03 By MS/MS 3.5 0.5 1 1 2 1185500 1185500 0 13741 1221 14549 35158;35159 28101 28101 1 54380 0 TNVIQSLLAR QEGVFRSNCMDCLDRTNVIQSLLARRSLQA DCLDRTNVIQSLLARRSLQAQLQRLGVLHV R T N A R R 1 1 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1113.6506 Q9NTJ5 Q9NTJ5 396 405 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.052581 82.261 By MS/MS 2 0 1 1 51396 51396 0 13742 2576 14550 35160 28102 28102 1 17384 0 TPADCPVIAIDSFR ADCDKFRHPLLHIQKTPADCPVIAIDSFRH KTPADCPVIAIDSFRHMYVFGDFKDVLIPG K T P F R H 2 1 0 2 1 0 0 0 0 2 0 0 0 1 2 1 1 0 0 1 0 0 14 0 1560.7606 Q9BS26 Q9BS26 314 327 ERP44 Endoplasmic reticulum resident protein 44 yes yes 2 0.00041631 156.14 By MS/MS 7 0 1 1 1010800 1010800 0 13743 2303 14551 35161 28103;28104 28103 2 15869 0 TPAEASSTGQTGPQSAL ESGPPPESMPKMPPRTPAEASSTGQTGPQS AEASSTGQTGPQSAL_______________ R T P A L - 3 0 0 0 0 2 1 2 0 0 1 0 0 0 2 3 3 0 0 0 0 0 17 0 1601.7533 Q9Y676 Q9Y676 242 258 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 4.7138E-07 214 By MS/MS 8 0 1 1 2169800 2169800 0 13744 2932 14552 35162 28105 28105 1 27394 0 TPAEFAK MPIMLRSSNCVLTGKTPAEFAKLNECPLDP SNCVLTGKTPAEFAKLNECPLDPGGYFIVK K T P A K L 2 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 7 0 762.3912 Q9NW08 Q9NW08 151 157 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.032587 102.77 By MS/MS 3 0 1 1 536670 536670 0 13745 2607 14553 35163 28106 28106 1 9819.6 0 TPAFAESVTEGDVR FRTTAVCKDDLVTVKTPAFAESVTEGDVRW KTPAFAESVTEGDVRWEKAVGDTVAEDEVV K T P V R W 2 1 0 1 0 0 2 1 0 0 0 0 0 1 1 1 2 0 0 2 0 0 14 0 1477.7049 P36957 P36957 75 88 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 3.396E-05 166.7 By MS/MS By MS/MS 6 0 2 1 1 3991000 3754100 236970 13746 842 14554 35164;35165 28107;28108 28107 2 25806 242830 TPAFAESVTEGDVRWEK FRTTAVCKDDLVTVKTPAFAESVTEGDVRW AFAESVTEGDVRWEKAVGDTVAEDEVVCEI K T P E K A 2 1 0 1 0 0 3 1 0 0 0 1 0 1 1 1 2 1 0 2 0 0 17 1 1920.9218 P36957 P36957 75 91 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 3 0.00032665 127.71 By MS/MS 6 0 1 1 4595600 4595600 0 13747 842 14555 35166 28109 28109 1 31591 0 TPAILISEVVR ELYSRWILPSSSARRTPAILISEVVRSLLV SARRTPAILISEVVRSLLVVSDLFTERNQF R T P V R S 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 1 1 0 0 2 0 0 11 0 1196.7129 P42858 P42858 2692 2702 HTT Huntingtin yes yes 2 0.048128 70.942 By MS/MS 1.5 0.5 1 1 2 135970 135970 0 13748 890 14556 35167;35168 28110 28110 1 37917 0 TPALVFEHVNNTDFK NIITLADIVKDPVSRTPALVFEHVNNTDFK TPALVFEHVNNTDFKQLYQTLTDYDIRFYM R T P F K Q 1 0 2 1 0 0 1 0 1 0 1 1 0 2 1 0 2 0 0 2 0 0 15 0 1730.8628 Q8NEV1;P68400 Q8NEV1 108 122 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 3 0.0073339 93.228 By MS/MS 7 0 1 1 1497000 1497000 0 13749 1213 14557 35169 28111 28111 1 23500 0 TPALVNAAVTYSK ______________________________ EKTPALVNAAVTYSKPRLATFWYYAKVELV K T P S K P 3 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 1 2 0 0 13 0 1333.7242 O75964 O75964 12 24 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 1.242E-11 237.76 By MS/MS 10 0 1 1 946090 946090 0 13750 357 14558 35170 28112 28112 1 50991 0 TPALVNAAVTYSKPR ______________________________ TPALVNAAVTYSKPRLATFWYYAKVELVPP K T P P R L 3 1 1 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 1 2 0 0 15 1 1586.878 O75964 O75964 12 26 ATP5L ATP synthase subunit g, mitochondrial yes yes 2;3 3.3446E-11 243.37 By MS/MS 10 0 2 2 3206200 3206200 0 13751 357 14559 35171;35172 28113;28114;28115 28115 3 172800 0 TPAPDPGSPR LSDEDLRGPGVRPSRTPAPDPGSPRTPPPT VRPSRTPAPDPGSPRTPPPTSRTHDGSRAS R T P P R T 1 1 0 1 0 0 0 1 0 0 0 0 0 0 4 1 1 0 0 0 0 0 10 0 993.48796 Q96LL9 Q96LL9 130 139 DNAJC30 DnaJ homolog subfamily C member 30 yes yes 2 0.046186 74.173 By MS/MS 9 0 1 1 1200800 1200800 0 13752 2196 14560 35173 28116 28116 1 23631 0 TPAQYDASELK ALSGHLETVILGLLKTPAQYDASELKASMK GLLKTPAQYDASELKASMKGLGTDEDSLIE K T P L K A 2 0 0 1 0 1 1 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 11 0 1221.5877 P07355;A6NMY6 P07355 105 115 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 0.003823 107.03 By MS/MS By MS/MS 4.67 2.75 1 1 1 2 1 2 4 2351500 1243600 1107900 13753 508 14561 35174;35175;35176;35177;35178;35179 28117;28118 28118 2 18913 358810 TPCEEILVK KAGNNMLLVGVHGPRTPCEEILVKHVGSRL GVHGPRTPCEEILVKHVGSRLYSVSYLLKD R T P V K H 0 0 0 0 1 0 2 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 9 0 1087.5583 P21333 P21333 2599 2607 FLNA Filamin-A yes yes 2 0.0017819 124.08 By MS/MS By matching 4.75 3.46 2 1 1 1 1 1 1 7 1 6543900 6509000 34873 13754 677 14562 35180;35181;35182;35183;35184;35185;35186;35187 28119;28120;28121;28122;28123 28120 5 1361700 34873 TPCGEGSKTWDR PVRMPTKTLRITTRKTPCGEGSKTWDRFQM TRKTPCGEGSKTWDRFQMRIHKRLIDLHSP K T P D R F 0 1 0 1 1 0 1 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 12 1 1392.6092 P60866 P60866 68 79 RPS20 40S ribosomal protein S20 yes yes 3 0.0081488 111.5 By MS/MS 10 0 1 1 397680 397680 0 13755 1098 14563 35188 28124 28124 1 21433 0 TPCNAGTFSQPEK VTGSWDQTVKLWDPRTPCNAGTFSQPEKVY PRTPCNAGTFSQPEKVYTLSVSGDRLIVGT R T P E K V 1 0 1 0 1 1 1 1 0 0 0 1 0 1 2 1 2 0 0 0 0 0 13 0 1435.6402 O43684 O43684 127 139 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 1.6338E-07 205.07 By MS/MS 8 0.816 1 1 1 3 2241500 2241500 0 13756 228 14564 35189;35190;35191 28125;28126 28125 2 34237 0 TPDGNLDQCK LWHSEEASLDADQARTPDGNLDQCK_____ ADQARTPDGNLDQCK_______________ R T P C K - 0 0 1 2 1 1 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 10 0 1146.4975 P30825 P30825 620 629 SLC7A1 High affinity cationic amino acid transporter 1 yes yes 2 0.00046342 133.99 By MS/MS 2 0.816 1 1 1 3 1289500 1289500 0 13757 779 14565 35192;35193;35194 28127;28128 28128 2 259750 0 TPDGQGLSTYK VSGETVVFQGGALGKTPDGQGLSTYKELCS ALGKTPDGQGLSTYKELCSLASDLSQPDLV K T P Y K E 0 0 0 1 0 1 0 2 0 0 1 1 0 0 1 1 2 0 1 0 0 0 11 0 1165.5615 Q5VYK3 Q5VYK3 1057 1067 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00077737 126.03 By MS/MS 2.5 0.5 1 1 2 1379400 1379400 0 13758 1656 14566 35195;35196 28129;28130 28129 2 305380 0 TPDTPNNDPR HIVVSDPEDITDCPRTPDTPNNDPRCSTSN TDCPRTPDTPNNDPRCSTSNNRLKALQKQL R T P P R C 0 1 2 2 0 0 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 10 0 1125.5051 Q16513 Q16513 121 130 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.017986 83.998 By MS/MS 3 0 1 1 302900 302900 0 13759 1547 14567 35197 28131 28131 1 5542.3 0 TPEASPEPK SMETEEKTSSAFVGKTPEASPEPKDQTLKM SAFVGKTPEASPEPKDQTLKMIKILSGEMA K T P P K D 1 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 0 0 0 9 0 954.46583 Q99460 Q99460 311 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.011992 96.948 By MS/MS 4 0 1 1 571100 571100 0 13760 2246 14568 35198 28132 28132 1 53744 0 TPEASPEPKDQTLK SMETEEKTSSAFVGKTPEASPEPKDQTLKM KTPEASPEPKDQTLKMIKILSGEMAIELHL K T P L K M 1 0 0 1 0 1 2 0 0 0 1 2 0 0 3 1 2 0 0 0 0 0 14 1 1539.7781 Q99460 Q99460 311 324 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.01821 79.089 By MS/MS 4 0 1 1 1239900 1239900 0 13761 2246 14569 35199 28133 28133 1 116680 0 TPEAVQK APHATLPRLLRASGRTPEAVQKLLEQGLRH RLLRASGRTPEAVQKLLEQGLRHSQDLAFL R T P Q K L 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 7 0 771.41267 P49327 P49327 430 436 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0080711 143.02 By MS/MS 3 0.816 1 1 1 3 6805000 6805000 0 13762 946 14570 35200;35201;35202 28134;28135;28136 28136 3 1796800 0 TPEDFLK VSAHSAKVKIAEFSRTPEDFLKKYDELKSK VKIAEFSRTPEDFLKKYDELKSKNTRNLDP R T P L K K 0 0 0 1 0 0 1 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 7 0 848.42798 Q9BSJ2 Q9BSJ2 59 65 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.014163 124.59 By MS/MS 4 0 1 1 1911600 1911600 0 13763 2307 14571 35203 28137 28137 1 179890 0 TPEDFVFPLLPNEELR VGVGVSCMAQDCPLRTPEDFVFPLLPNEEL PEDFVFPLLPNEELREKYRRYLFRDYVESH R T P L R E 0 1 1 1 0 0 3 0 0 0 3 0 0 2 3 0 1 0 0 1 0 0 16 0 1914.9727 O95376 O95376 192 207 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 2 0.00030653 138.45 By MS/MS 6 0 1 1 196630 196630 0 13764 407 14572 35204 28138;28139 28139 2 1351.7 0 TPEDFVFPLLPNEELREK VGVGVSCMAQDCPLRTPEDFVFPLLPNEEL DFVFPLLPNEELREKYRRYLFRDYVESHYQ R T P E K Y 0 1 1 1 0 0 4 0 0 0 3 1 0 2 3 0 1 0 0 1 0 0 18 1 2172.1103 O95376 O95376 192 209 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 3 0.00029728 122.12 By MS/MS 6 0 1 1 460010 460010 0 13765 407 14573 35205 28140;28141 28140 2 3162.2 0 TPEDVICER SHHLIVKNSRNKYDKTPEDVICERSKNKSV RNKYDKTPEDVICERSKNKSVELKERIREY K T P E R S 0 1 0 1 1 0 2 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 9 0 1117.5074 Q86XL3 Q86XL3 448 456 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.010114 100.25 By MS/MS 4.5 0.5 1 1 2 1984200 1984200 0 13766 1845 14574 35206;35207 28142 28142 1 159750 0 TPEILTVNSIGQLK DNADSSTLHAVTFLRTPEILTVNSIGQLKI RTPEILTVNSIGQLKIWDFRQQGNEPSQIL R T P L K I 0 0 1 0 0 1 1 1 0 2 2 1 0 0 1 1 2 0 0 1 0 0 14 0 1511.8559 Q8NFH3 Q8NFH3 183 196 NUP43 Nucleoporin Nup43 yes yes 2 1.8101E-43 320.96 By MS/MS 7.5 0.5 1 1 2 1066000 1066000 0 13767 1964 14575 35208;35209 28143 28143 1 16117 0 TPEIVAPQSAHAAFNK ACKAYRDLAFEKGIKTPEIVAPQSAHAAFN PEIVAPQSAHAAFNKAASYFGMKIVRVPLT K T P N K A 4 0 1 0 0 1 1 0 1 1 0 1 0 1 2 1 1 0 0 1 0 0 16 0 1679.8631 O95470 O95470 232 247 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 3 0.011542 87.363 By MS/MS 6 0 1 1 3035500 3035500 0 13768 413 14576 35210 28144 28144 1 20866 0 TPEIYLAYR RRALPEFFNGKNKSKTPEIYLAYRNFMIDT GKNKSKTPEIYLAYRNFMIDTYRLNPQEYL K T P Y R N 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 0 1 0 2 0 0 0 9 0 1124.5866 Q92922;Q8TAQ2 Q92922 483 491 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 2 3.6437E-05 174.16 By MS/MS 3.5 0.5 1 1 2 880060 880060 0 13769 2079;1976 14577 35211;35212 28145 28145 1 49370 0 TPELNLDQFHDK NGIECGGAYVKLLSKTPELNLDQFHDKTPY LSKTPELNLDQFHDKTPYTIMFGPDKCGED K T P D K T 0 0 1 2 0 1 1 0 1 0 2 1 0 1 1 0 1 0 0 0 0 0 12 0 1455.6994 P27824 P27824 171 182 CANX Calnexin yes yes 2 0.028434 83.081 By MS/MS 4 0 1 1 1110700 1110700 0 13770 747 14578 35213 28146 28146 0 104530 0 TPENLITEIR SLGSNPFLTRNQIPRTPENLITEIRSSWRK NQIPRTPENLITEIRSSWRKAIEMEENRTK R T P I R S 0 1 1 0 0 0 2 0 0 2 1 0 0 0 1 0 2 0 0 0 0 0 10 0 1184.6401 Q7Z4H7 Q7Z4H7 584 593 HAUS6 HAUS augmin-like complex subunit 6 yes yes 2 1.0906E-14 233.09 By MS/MS 4 0.816 1 1 1 3 4317900 4317900 0 13771 1792 14579 35214;35215;35216 28147 28147 1 341220 0 TPEQCPSVVSLLSESYNPHVR VRRAAVESLGFILFRTPEQCPSVVSLLSES SVVSLLSESYNPHVRYGAAMALGICCAGTG R T P V R Y 0 1 1 0 1 1 2 0 1 0 2 0 0 0 3 4 1 0 1 3 0 0 21 0 2398.1587 Q99460 Q99460 629 649 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 1.8172E-08 204.51 By MS/MS 4 0 1 1 636910 636910 0 13772 2246 14580 35217 28148;28149 28149 2 59937 0 TPEVDDEALEK SAEPEQSLACQCLVRTPEVDDEALEKFDKA CLVRTPEVDDEALEKFDKALKALPMHIRLS R T P E K F 1 0 0 2 0 0 3 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 11 0 1244.5772 CON__P02754 CON__P02754 125 135 yes yes 2 0.0023951 130.66 By MS/MS By MS/MS 9.5 0.5 1 1 1 1 315510 263050 52460 + 13773 41 14581 35218;35219 28150;28151 28150 2 14177 119630 TPEVDDEALEKFDK SAEPEQSLACQCLVRTPEVDDEALEKFDKA RTPEVDDEALEKFDKALKALPMHIRLSFNP R T P D K A 1 0 0 3 0 0 3 0 0 0 1 2 0 1 1 0 1 0 0 1 0 0 14 1 1634.7675 CON__P02754 CON__P02754 125 138 yes yes 3 1.1913E-09 197.38 By MS/MS 6.5 3.5 1 1 2 685180 0 685180 + 13774 41 14582 35220;35221 28152;28153 28152 2 0 246140 TPFGAYGGLLK ______________________________ AAKRTPFGAYGGLLKDFTATDLSEFAAKAA R T P L K D 1 0 0 0 0 0 0 3 0 0 2 1 0 1 1 0 1 0 1 0 0 0 11 0 1122.6073 P42765 P42765 15 25 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 1.7343E-06 181.55 By MS/MS 7 0 1 1 644490 644490 0 13775 887 14583 35222 28154 28154 1 10117 0 TPFLLSGTSYK AKPNIRNVVVVDGVRTPFLLSGTSYKDLMP DGVRTPFLLSGTSYKDLMPHDLARAALTGL R T P Y K D 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 2 0 1 0 0 0 11 0 1212.639 P55084 P55084 62 72 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.00088939 123.79 By MS/MS 6.5 0.5 1 1 2 8416400 8416400 0 13776 1055 14584 35223;35224 28155;28156 28155 2 85024 0 TPGKEAVAMESYAK SEMLMAHAVTQLANRTPGKEAVAMESYAKA RTPGKEAVAMESYAKALRMLPTIIADNAGY R T P A K A 3 0 0 0 0 0 2 1 0 0 0 2 1 0 1 1 1 0 1 1 0 0 14 1 1480.7232 P78371 P78371 428 441 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.0010198 161.87 By MS/MS 6.25 0.433 3 1 4 17602000 17602000 0 13777 1222 14585;14586 35225;35226;35227;35228 28157;28158;28159 28157 713 3 121850 0 TPGPGAQSALR ALHIKLRATGGNRTKTPGPGAQSALRALAR NRTKTPGPGAQSALRALARSGMKIGRIEDV K T P L R A 2 1 0 0 0 1 0 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1053.5567 P62263 P62263 107 117 RPS14 40S ribosomal protein S14 yes yes 2 2.3315E-05 160.77 By MS/MS By MS/MS 9.33 0.745 1 2 3 4 2 82257000 81585000 671480 13778 1147 14587 35229;35230;35231;35232;35233;35234 28160;28161;28162;28163;28164;28165 28162 6 4371200 885700 TPGQINLAQLR VVVGQVPPGTNHISKTPGQINLAQLRLQHM HISKTPGQINLAQLRLQHMQQQVYAQKHQQ K T P L R L 1 1 1 0 0 2 0 1 0 1 2 0 0 0 1 0 1 0 0 0 0 0 11 0 1209.683 Q9UPN9 Q9UPN9 505 515 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.00020874 142.36 By MS/MS 3 0.816 1 1 1 3 526060 526060 0 13779 2800 14588 35235;35236;35237 28166 28166 1 42628 0 TPGRPTSSQSYEQNIK EHPLQYNYTFWYSRRTPGRPTSSQSYEQNI PGRPTSSQSYEQNIKQIGTFASVEQFWRFY R T P I K Q 0 1 1 0 0 2 1 1 0 1 0 1 0 0 2 3 2 0 1 0 0 0 16 1 1791.8751 O60573 O60573 68 83 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 3 0.0030892 102.15 By MS/MS 8 0 1 1 921920 921920 0 13780 265 14589 35238 28167 28167 1 11639 0 TPGSPGNLQVR QRLWSTYLRPLLVVRTPGSPGNLQVRKFLE LVVRTPGSPGNLQVRKFLEATLRSLTAGWH R T P V R K 0 1 1 0 0 1 0 2 0 0 1 0 0 0 2 1 1 0 0 1 0 0 11 0 1124.5938 Q9NXS2 Q9NXS2 106 116 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.0086362 94.309 By MS/MS 7 0 1 1 3067600 3067600 0 13781 2628 14590 35239 28168 28168 1 48156 0 TPHVLVLGSGVYR LYLTYWGTTHDLTFRTPHVLVLGSGVYRIG FRTPHVLVLGSGVYRIGSSVEFDWCAVGCI R T P Y R I 0 1 0 0 0 0 0 2 1 0 2 0 0 0 1 1 1 0 1 3 0 0 13 0 1396.7827 P27708 P27708 932 944 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 0.053932 87.216 By MS/MS 2 0 1 1 306280 306280 0 13782 745 14591 35240 28169 28169 1 103600 0 TPIVGQPSIPGGPVR ASVESSSGEAFHVGKTPIVGQPSIPGGPVR TPIVGQPSIPGGPVRLCPGRIRYFKI____ K T P V R L 0 1 0 0 0 1 0 3 0 2 0 0 0 0 4 1 1 0 0 2 0 0 15 0 1473.8304 CON__P12763 CON__P12763 334 348 yes yes 2 0.0003591 156.36 By MS/MS 7.4 1.85 1 1 1 1 1 5 15981000 15981000 0 + 13783 49 14592 35241;35242;35243;35244;35245 28170;28171;28172;28173;28174 28174 5 169540 0 TPKEAIEGTYIDK EKLPRYYKNIGLGFKTPKEAIEGTYIDKKC FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL K T P D K K 1 0 0 1 0 0 2 1 0 2 0 2 0 0 1 0 2 0 1 0 0 0 13 1 1463.7508 P62280 P62280 46 58 RPS11 40S ribosomal protein S11 yes yes 2 0.040824 102.73 By MS/MS 9 0 1 1 355120 355120 0 13784 1152 14593 35246 28175 28175 1 6988.8 0 TPKEAIEGTYIDKK EKLPRYYKNIGLGFKTPKEAIEGTYIDKKC KTPKEAIEGTYIDKKCPFTGNVSIRGRILS K T P K K C 1 0 0 1 0 0 2 1 0 2 0 3 0 0 1 0 2 0 1 0 0 0 14 2 1591.8457 P62280 P62280 46 59 RPS11 40S ribosomal protein S11 yes yes 3 0.00036137 140.33 By MS/MS 9 0 1 1 1403600 1403600 0 13785 1152 14594 35247 28176 28176 1 27622 0 TPKEDLCSK DLIDEAYGLDFYILKTPKEDLCSKFGMDLK DFYILKTPKEDLCSKFGMDLKRGMLLRLAR K T P S K F 0 0 0 1 1 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 9 1 1076.5172 Q13084 Q13084 148 156 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.0043901 135.43 By MS/MS 8 0 1 1 1415200 1415200 0 13786 1350 14595 35248 28177 28177 1 17867 0 TPLDLAAFK VQSLLDLDVRNSSGRTPLDLAAFKGHVECV RNSSGRTPLDLAAFKGHVECVDVLINQGAS R T P F K G 2 0 0 1 0 0 0 0 0 0 2 1 0 1 1 0 1 0 0 0 0 0 9 0 974.54368 O15084 O15084 585 593 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.0095404 101.25 By MS/MS 4 0 1 1 520240 520240 0 13787 158 14596 35249 28178 28178 1 48958 0 TPLEELCLQIK RASLLDDYQLPEILRTPLEELCLQIKILRL EILRTPLEELCLQIKILRLGGIAYFLSRLM R T P I K I 0 0 0 0 1 1 2 0 0 1 3 1 0 0 1 0 1 0 0 0 0 0 11 0 1342.7166 Q9H2U1 Q9H2U1 634 644 DHX36 ATP-dependent RNA helicase DHX36 yes yes 2 0.00057311 130.41 By MS/MS 4 0 1 1 321810 321810 0 13788 2432 14597 35250 28179 28179 1 30285 0 TPLENLVLQAK RLEKMVPFQVPEILRTPLENLVLQAKIHMP EILRTPLENLVLQAKIHMPEKTAVEFLSKA R T P A K I 1 0 1 0 0 1 1 0 0 0 3 1 0 0 1 0 1 0 0 1 0 0 11 0 1224.7078 Q7L2E3 Q7L2E3 814 824 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 4.1625E-13 232.72 By MS/MS By MS/MS 3.4 1.02 1 2 1 1 4 1 5458700 5365100 93559 13789 1761 14598 35251;35252;35253;35254;35255 28180;28181;28182;28183;28184;28185 28183 6 256570 11909 TPLQQSTLGK VITGPQIRPGMTVIRTPLQQSTLGKAIIRT MTVIRTPLQQSTLGKAIIRTPVMVQPGAPQ R T P G K A 0 0 0 0 0 2 0 1 0 0 2 1 0 0 1 1 2 0 0 0 0 0 10 0 1071.5924 Q12830 Q12830 2192 2201 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 2 0.042943 75.738 By MS/MS 7 1.41 1 1 1 1 1 5 13547000 13547000 0 13790 1331 14599 35256;35257;35258;35259;35260 28186 28186 1 101890 0 TPLQVAK VSQGASIYIENKEEKTPLQVAKGGLGLILK YIENKEEKTPLQVAKGGLGLILKRMVEG__ K T P A K G 1 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 7 0 755.45414 O75832 O75832 207 213 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2 0.038374 98.418 By MS/MS 9 0.816 1 1 1 3 1821600 1821600 0 13791 350 14600 35261;35262;35263 28187 28187 1 29383 0 TPLRPLDPTR GLPHISDVVLDKANKTPLRPLDPTRLQGIN DKANKTPLRPLDPTRLQGINCGPDFTPSFA K T P T R L 0 2 0 1 0 0 0 0 0 0 2 0 0 0 3 0 2 0 0 0 0 0 10 1 1164.6615 Q04637 Q04637 647 656 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.001123 112.85 By MS/MS By matching 2.33 0.471 2 1 2 1 22842000 22796000 45701 13792 1291 14601 35264;35265;35266 28188;28189 28188 2 6565100 64630 TPNEEIDR KNSLPDALLPNLLDRTPNEEIDRQNDDQRK LPNLLDRTPNEEIDRQNDDQRKSNRHKELF R T P D R Q 0 1 1 1 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 8 0 972.45124 Q96N67 Q96N67 214 221 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0072877 114.89 By MS/MS 2 0 1 1 837280 837280 0 13793 2201 14602 35267 28190 28190 1 283200 0 TPNEEIDRQNDDQR KNSLPDALLPNLLDRTPNEEIDRQNDDQRK RTPNEEIDRQNDDQRKSNRHKELFALHPSP R T P Q R K 0 2 2 3 0 2 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 14 1 1728.7663 Q96N67 Q96N67 214 227 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 0.027809 80.834 By MS/MS 2.33 0.471 2 1 3 1486200 1486200 0 13794 2201 14603 35268;35269;35270 28191;28192 28191 2 478570 0 TPNGVVLAPVQLGK ELLLKTFDHYCEYRRTPNGVVLAPVQLGKW RTPNGVVLAPVQLGKWLVLFCDEINLPDMD R T P G K W 1 0 1 0 0 1 0 2 0 0 2 1 0 0 2 0 1 0 0 3 0 0 14 0 1391.8136 Q14204 Q14204 2644 2657 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00050807 168.85 By MS/MS 2 0.816 1 1 1 3 2118300 2118300 0 13795 1433 14604 35271;35272;35273 28193;28194;28195 28193 3 570190 0 TPQAPASANLVGPR SGTPPTAANYPSSSRTPQAPASANLVGPRS RTPQAPASANLVGPRSAHATAPVNIAGSRT R T P P R S 3 1 1 0 0 1 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1377.7365 Q9UQ35 Q9UQ35 2329 2342 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.037404 72.731 By MS/MS 1 0 1 1 199460 199460 0 13796 2804 14605 35274 28196 28196 1 48064 0 TPQEWAPQTAR AHDKQPSVLSSGYQKTPQEWAPQTARIRTR GYQKTPQEWAPQTARIRTRMQNDSILKSEL K T P A R I 2 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 2 1 0 0 0 0 11 0 1283.6258 Q5JTV8 Q5JTV8 286 296 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 0.001066 120.27 By MS/MS 6 0 1 1 1059700 1059700 0 13797 1611 14606 35275 28197 28197 1 7284.5 0 TPQIVALAK EGRPVLVHCSDGWDRTPQIVALAKILLDPY SDGWDRTPQIVALAKILLDPYYRTLEGFQV R T P A K I 2 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 9 0 939.57532 Q9NYA4;Q13615 Q9NYA4 414 422 MTMR4;MTMR3 Myotubularin-related protein 4;Myotubularin-related protein 3 yes no 2 0.0022978 112.41 By MS/MS 3 0 1 1 286940 286940 0 13798 2632 14607 35276 28198 28198 1 5250.2 0 TPQSGSAPTAK SPVAPTAQPKAPPSRTPQSGSAPTAKAPPK PPSRTPQSGSAPTAKAPPKATSTRAQQQLA R T P A K A 2 0 0 0 0 1 0 1 0 0 0 1 0 0 2 2 2 0 0 0 0 0 11 0 1043.5247 Q6P1N0 Q6P1N0 470 480 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.0016205 112.85 By MS/MS 3 0 1 1 236380 236380 0 13799 1701 14608 35277 28199 28199 1 4325.1 0 TPQSPAPCVLLR ARQLWDSPETAPAARTPQSPAPCVLLRAQR AARTPQSPAPCVLLRAQRSLAPEPKEPLIP R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.034984 77.288 By MS/MS 3 0 1 1 339840 339840 0 13800 2930 14609 35278 28200;28201 28201 2 6218.1 0 TPSASGLLVLASAMR SPEVFLKLILSTLKKTPSASGLLVLASAMR TPSASGLLVLASAMRGCPREALQPHLAAIA K T P M R G 3 1 0 0 0 0 0 1 0 0 3 0 1 0 1 3 1 0 0 1 0 0 15 0 1472.8021 Q86Y56 Q86Y56 447 461 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.026785 78.705 By MS/MS 4 0 1 1 404010 404010 0 13801 1850 14610 35279 28202 28202 953 1 38020 0 TPSGNLVNR LLHSILRSPMSFFERTPSGNLVNRFSKELD MSFFERTPSGNLVNRFSKELDTVDSMIPEV R T P N R F 0 1 2 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 9 0 956.50394 P33527 P33527 1067 1075 ABCC1 Multidrug resistance-associated protein 1 yes yes 2 0.00078147 138.06 By MS/MS 2 0.816 1 1 1 3 459380 459380 0 13802 802 14611 35280;35281;35282 28203;28204 28204 2 109440 0 TPSNELYKPLR TDNDLRAKFKERWQRTPSNELYKPLRAEGT RWQRTPSNELYKPLRAEGTNFRTVLDKAVQ R T P L R A 0 1 1 0 0 0 1 0 0 0 2 1 0 0 2 1 1 0 1 0 0 0 11 1 1316.7089 Q8WUM4 Q8WUM4 479 489 PDCD6IP Programmed cell death 6-interacting protein yes yes 3 0.039078 66.663 By MS/MS 4 0 1 1 1301000 1301000 0 13803 2018 14612 35283 28205 28205 1 122430 0 TPSNLAAAR EIEHHEMAKSSLRMRTPSNLAAARLTGPSH SSLRMRTPSNLAAARLTGPSHSKGSLGEER R T P A R L 3 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 9 0 899.48248 Q86U86 Q86U86 301 309 PBRM1 Protein polybromo-1 yes yes 2 0.0019309 122.19 By MS/MS 2 0 1 1 275200 275200 0 13804 1817 14613 35284 28206 28206 1 93084 0 TPSQIIR SQSQKFSSEHKNLSRTPSQIIRKPDRERVE SEHKNLSRTPSQIIRKPDRERVEDFDHTSR R T P I R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 7 0 813.47085 Q01804 Q01804 414 420 OTUD4 OTU domain-containing protein 4 yes yes 2 0.02441 138.37 By MS/MS 2.5 0.5 1 1 2 121690 0 121690 13805 1270 14614 35285;35286 28207 28207 1 0 81384 TPSSDVLVFDYTK RARYMPQNPCIIATKTPSSDVLVFDYTKHP TKTPSSDVLVFDYTKHPSKPDPSGECNPDL K T P T K H 0 0 0 2 0 0 0 0 0 0 1 1 0 1 1 2 2 0 1 2 0 0 13 0 1470.7242 Q09028;Q16576 Q09028 144 156 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 1.7852E-11 233.13 By MS/MS 7.5 1.12 1 1 1 1 4 4422100 4422100 0 13806 1318;1553 14615 35287;35288;35289;35290 28208;28209 28208 2 36682 0 TPTEALASFDYIVR ADDWLVHLISPNVYRTPTEALASFDYIVRE RTPTEALASFDYIVREGKFGAVEGAVAKYM R T P V R E 2 1 0 1 0 0 1 0 0 1 1 0 0 1 1 1 2 0 1 1 0 0 14 0 1581.8039 Q9H7Z7 Q9H7Z7 253 266 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 2 0.00043616 181.4 By MS/MS 8 0 1 1 127600 127600 0 13807 2469 14616 35291 28210;28211 28210 2 1610.9 0 TPTEAPADCR ______________________________ TKLKKTPTEAPADCRALIDKLKVCNDEQLL K T P C R A 2 1 0 1 1 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 10 0 1116.487 Q7Z6Z7 Q7Z6Z7 11 20 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.011013 97.635 By MS/MS 1.5 0.5 1 1 2 163720 163720 0 13808 1802 14617 35292;35293 28212;28213 28212 1 48719 0 TPVEEVPAAIAPFQGR YKLVNNGEKLEFLHKTPVEEVPAAIAPFQG PVEEVPAAIAPFQGRVLIGVGKLLRVYDLG K T P G R V 3 1 0 0 0 1 2 1 0 1 0 0 0 1 3 0 1 0 0 2 0 0 16 0 1680.8835 Q15393 Q15393 943 958 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.00010995 184.55 By MS/MS 2 0.816 1 1 1 3 1068200 1068200 0 13809 1508 14618 35294;35295;35296 28214;28215;28216 28214 3 271420 0 TPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK K T P H R I 1 1 0 0 0 0 2 0 1 1 0 0 0 0 2 0 1 0 0 2 0 0 11 0 1246.667 P60866 P60866 9 19 RPS20 40S ribosomal protein S20 yes yes 2;3 5.2512E-09 202.2 By MS/MS By MS/MS 10 0 4 2 2 72070000 70937000 1133000 13810 1098 14619 35297;35298;35299;35300 28217;28218;28219;28220;28221 28218 5 3823200 1450600 TPVEPEVAIHRIR ______________________________ GKTPVEPEVAIHRIRITLTSRNVKSLEKVC K T P I R I 1 2 0 0 0 0 2 0 1 2 0 0 0 0 2 0 1 0 0 2 0 0 13 1 1515.8522 P60866 P60866 9 21 RPS20 40S ribosomal protein S20 yes yes 3 0.028364 70.942 By MS/MS 10 0 1 1 985960 985960 0 13811 1098 14620 35301 28222 28222 1 53139 0 TPVIDADKPVSSQLR IHYGVKSNSLAFIKRTPVIDADKPVSSQLR TPVIDADKPVSSQLRVLTLSEDSPYETLHS R T P L R V 1 1 0 2 0 1 0 0 0 1 1 1 0 0 2 2 1 0 0 2 0 0 15 1 1624.8784 Q14204 Q14204 122 136 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 3.003E-10 206.74 By MS/MS 2.62 1.32 2 2 2 1 1 8 11218000 11218000 0 13812 1433 14621 35302;35303;35304;35305;35306;35307;35308;35309 28223;28224;28225;28226;28227 28226 5 2755100 0 TPVLFDIYEIK ELSGNFEKTILALMKTPVLFDIYEIKEAIK ALMKTPVLFDIYEIKEAIKGVGTDEACLIE K T P I K E 0 0 0 1 0 0 1 0 0 2 1 1 0 1 1 0 1 0 1 1 0 0 11 0 1336.7279 P50995 P50995 272 282 ANXA11 Annexin A11 yes yes 2 0.00063292 128.91 By MS/MS 6 0 1 1 299470 299470 0 13813 986 14622 35310 28228 28228 1 2058.7 0 TPVLVGSDEFDK LPTIKWKPLIHSPSRTPVLVGSDEFDKCLS PSRTPVLVGSDEFDKCLSNDKFSHEEYSNG R T P D K C 0 0 0 2 0 0 1 1 0 0 1 1 0 1 1 1 1 0 0 2 0 0 12 0 1305.6452 Q9NZJ5 Q9NZJ5 441 452 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes yes 2 0.00021767 149.33 By MS/MS 3 0 1 1 356760 356760 0 13814 2650 14623 35311 28229 28229 1 6527.8 0 TPVPSDIDISR KPGKWMIQYNNLNLKTPVPSDIDISRSCKP LNLKTPVPSDIDISRSCKPKPIGKLAREIG K T P S R S 0 1 0 2 0 0 0 0 0 2 0 0 0 0 2 2 1 0 0 1 0 0 11 0 1198.6194 P11586 P11586 314 324 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.029044 80.916 By MS/MS 3 1.41 1 1 1 1 1 5 14320000 14320000 0 13815 582 14624 35312;35313;35314;35315;35316 28230 28230 1 1278400 0 TPVSITEHPK VLGISSREGEEVMFKTPVSITEHPKINEWL EVMFKTPVSITEHPKINEWLTLVEKEMRVT K T P P K I 0 0 0 0 0 0 1 0 1 1 0 1 0 0 2 1 2 0 0 1 0 0 10 0 1107.5924 Q14204 Q14204 1688 1697 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.00088624 128.35 By MS/MS 1.5 0.5 2 2 4 1519200 1519200 0 13816 1433 14625 35317;35318;35319;35320 28231;28232;28233;28234 28234 4 444230 0 TPVTQVNEVTGTLR LQKDVEDFLSPLLGKTPVTQVNEVTGTLRI KTPVTQVNEVTGTLRIKGYFDQELKAWLLE K T P L R I 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 0 4 0 0 3 0 0 14 0 1513.81 Q13405 Q13405 135 148 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 3.5473E-12 284.12 By MS/MS 10 0 1 1 4957800 4957800 0 13817 1378 14626 35321 28235 28235 1 267210 0 TPVVQNAASIVQPSPAHVGQQGLSK KLRQSQLQKENVVQKTPVVQNAASIVQPSP VQPSPAHVGQQGLSKLPSRPGAQGVEPQNL K T P S K L 3 0 1 0 0 4 0 2 1 1 1 1 0 0 3 3 1 0 0 4 0 0 25 0 2512.3398 Q8WXI9 Q8WXI9 200 224 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.012209 86.761 By MS/MS 5 0 1 1 1436000 1436000 0 13818 2040 14627 35322 28236 28236 0 14402 0 TPYTDVNIVTIR LYANVRPCVSIEGYKTPYTDVNIVTIRENT GYKTPYTDVNIVTIRENTEGEYSGIEHVIV K T P I R E 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 0 3 0 1 2 0 0 12 0 1390.7456 P50213 P50213 135 146 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 1.2894E-08 227.36 By MS/MS 7.5 0.5 1 1 2 7515500 7515500 0 13819 971 14628 35323;35324 28237 28237 1 115070 0 TPYVTTTVSAHSAK GDGAEVYIDLLQKNRTPYVTTTVSAHSAKV RTPYVTTTVSAHSAKVKIAEFSRTPEDFLK R T P A K V 2 0 0 0 0 0 0 0 1 0 0 1 0 0 1 2 4 0 1 2 0 0 14 0 1461.7464 Q9BSJ2 Q9BSJ2 37 50 TUBGCP2 Gamma-tubulin complex component 2 yes yes 3 0.019876 109.6 By MS/MS 4 0 1 1 933330 933330 0 13820 2307 14629 35325 28238 28238 1 87832 0 TQADELPACLLSAAR LPKIERSASEPSLHRTQADELPACLLSAAR TQADELPACLLSAARLVP____________ R T Q A R L 4 1 0 1 1 1 1 0 0 0 3 0 0 0 1 1 1 0 0 0 0 0 15 0 1614.8036 P10398 P10398 589 603 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.0004683 164.92 By MS/MS 5 0 1 1 326700 326700 0 13821 559 14630 35326 28239;28240 28240 2 3276.6 0 TQCALAASK ERMKCFSEENHEPLRTQCALAASKLLKKPD NHEPLRTQCALAASKLLKKPDQGRAVSTCA R T Q S K L 3 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 9 0 948.46987 Q96QK1 Q96QK1 651 659 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0032516 112.3 By MS/MS 5 0 1 1 2102600 2102600 0 13822 2217 14631 35327 28241 28241 1 21088 0 TQDASGPELILPASIEFR IRVEQQPDYRRQESRTQDASGPELILPASI ASGPELILPASIEFRESSEDSFLSAIINYT R T Q F R E 2 1 0 1 0 1 2 1 0 2 2 0 0 1 2 2 1 0 0 0 0 0 18 0 1943 P55196 P55196 591 608 MLLT4 Afadin yes yes 2 0.00019903 147.12 By MS/MS 4 0 1 1 76938 76938 0 13823 1057 14632 35328 28242;28243 28243 2 7240.4 0 TQDGETALQLAIR SALFLLEHQADINVRTQDGETALQLAIRNQ VRTQDGETALQLAIRNQLPLVVDAICTRGA R T Q I R N 2 1 0 1 0 2 1 1 0 1 2 0 0 0 0 0 2 0 0 0 0 0 13 0 1414.7416 Q9P2R3 Q9P2R3 652 664 ANKFY1 Rabankyrin-5 yes yes 2 4.7281E-17 258.01 By MS/MS 3.25 1.48 1 1 1 1 4 2932500 2932500 0 13824 2689 14633 35329;35330;35331;35332 28244;28245;28246 28245 3 96881 0 TQDRPLLAVQEALKK ______________________________ TQDRPLLAVQEALKKCFPVVEEQQGLWQSA M T Q K K C 2 1 0 1 0 2 1 0 0 0 3 2 0 0 1 0 1 0 0 1 0 0 15 2 1708.9836 Q9NX04 Q9NX04 2 16 C1orf109 Uncharacterized protein C1orf109 yes yes 3 0.0043036 87.647 By MS/MS 8 0 1 1 290610 290610 0 13825 2616 14634 35333 28247 28247 1 3668.9 0 TQDTINR KVVLLEDLASQVGLRTQDTINRIQDLLAEG LASQVGLRTQDTINRIQDLLAEGTITGVID R T Q N R I 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 7 0 846.41954 Q96HY6 Q96HY6 242 248 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 0.034145 101.6 By MS/MS 7 0 1 1 2013600 2013600 0 13826 2169 14635 35334 28248 28248 1 31609 0 TQEFLSACK TLVPPPPDTMSCRDRTQEFLSACKSLQTRQ MSCRDRTQEFLSACKSLQTRQNGIQTNKPA R T Q C K S 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 9 0 1082.5066 Q13190 Q13190 61 69 STX5 Syntaxin-5 yes yes 2 0.0016646 125.57 By MS/MS 7 0 1 1 1706500 1706500 0 13827 1364 14636 35335 28249 28249 1 26790 0 TQEGSLSAR MFVETQASQGTLQTRTQEGSLSARWPVAGQ GTLQTRTQEGSLSARWPVAGQIRATQQQHD R T Q A R W 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 0 947.46722 P78527 P78527 2620 2628 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 7.9253E-05 166.07 By MS/MS 3 1.41 1 1 1 1 1 5 6394200 6394200 0 13828 1225 14637 35336;35337;35338;35339;35340 28250;28251 28251 2 1650000 0 TQEIIPTQAK PAREFRALRKQGKVKTQEIIPTQAKWQEVK QGKVKTQEIIPTQAKWQEVKEVLLQQSVMG K T Q A K W 1 0 0 0 0 2 1 0 0 2 0 1 0 0 1 0 2 0 0 0 0 0 10 0 1127.6186 Q8WTW3 Q8WTW3 657 666 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.0073726 100.25 By MS/MS 4 0 1 1 763750 763750 0 13829 2010 14638 35341 28252 28252 1 71874 0 TQELAFATHQDPADPK ILTPIEVAIEDMQKKTQELAFATHQDPADP QELAFATHQDPADPKMLQMVLQGSVGTTVN K T Q P K M 3 0 0 2 0 2 1 0 1 0 1 1 0 1 2 0 2 0 0 0 0 0 16 0 1767.8428 Q96N67 Q96N67 2004 2019 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 0.00070009 116.87 By MS/MS 2 0 2 2 2921700 2921700 0 13830 2201 14639 35342;35343 28253;28254 28254 2 988220 0 TQETQEIR TPLKIEIDPQFQVVRTQETQEIRTLNNQFA PQFQVVRTQETQEIRTLNNQFASFIDKVRF R T Q I R T 0 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 8 0 1003.4934 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 109 116 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.041167 98.582 By matching By MS/MS 3.25 0.829 1 1 2 1 3 429210 141800 287410 + 13831 70 14640 35344;35345;35346;35347 28255 28255 1 13344 169560 TQGFLALFSGDTGEIK VHTVSLHEIDVINSRTQGFLALFSGDTGEI QGFLALFSGDTGEIKSEVREQINAKVAEWR R T Q I K S 1 0 0 1 0 1 1 3 0 1 2 1 0 2 0 1 2 0 0 0 0 0 16 0 1682.8516 Q9Y230 Q9Y230 254 269 RUVBL2 RuvB-like 2 yes yes 2 2.7735E-07 258.91 By MS/MS 6 0 1 1 5054500 5054500 0 13832 2810 14641 35348 28256 28256 1 34746 0 TQGFLALFSGDTGEIKSEVR VHTVSLHEIDVINSRTQGFLALFSGDTGEI ALFSGDTGEIKSEVREQINAKVAEWREEGK R T Q V R E 1 1 0 1 0 1 2 3 0 1 2 1 0 2 0 2 2 0 0 1 0 0 20 1 2154.0957 Q9Y230 Q9Y230 254 273 RUVBL2 RuvB-like 2 yes yes 3 6.453E-06 139.78 By MS/MS 6 0 1 1 590080 590080 0 13833 2810 14642 35349 28257 28257 1 4056.3 0 TQGTKIASDGLK AMFNIRNIGKTLVTRTQGTKIASDGLKGRV VTRTQGTKIASDGLKGRVFEVSLADLQNDE R T Q L K G 1 0 0 1 0 1 0 2 0 1 1 2 0 0 0 1 2 0 0 0 0 0 12 1 1217.6616 P61247 P61247 52 63 RPS3A 40S ribosomal protein S3a yes yes 2 0.003111 137.01 By MS/MS 8 0 1 1 965810 965810 0 13834 1118 14643 35350 28258 28258 1 12193 0 TQHGGSHVSR LLAEGVILRRVGEARTQHGGSHVSRKSEHL VGEARTQHGGSHVSRKSEHLSVRPQTALEE R T Q S R K 0 1 0 0 0 1 0 2 2 0 0 0 0 0 0 2 1 0 0 1 0 0 10 0 1064.5112 Q9Y3D9 Q9Y3D9 140 149 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00067629 129.88 By MS/MS By matching 9.25 0.433 3 1 3 1 4163500 4133200 30308 13835 2875 14644 35351;35352;35353;35354 28259;28260 28259 2 82389 69112 TQHHVEALVEHQNGK VFPSREFWHRLRVIRTQHHVEALVEHQNGK TQHHVEALVEHQNGKVVVSASTREWAIKKH R T Q G K V 1 0 1 0 0 2 2 1 3 0 1 1 0 0 0 0 1 0 0 2 0 0 15 0 1725.8547 Q9H0U6 Q9H0U6 86 100 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 3 0.00040157 146.27 By MS/MS 9 0 1 1 542390 542390 0 13836 2417 14645 35355 28261 28261 1 10674 0 TQHLSVETSYLQHESGR SYAWLLSWLTRHSTRTQHLSVETSYLQHES HLSVETSYLQHESGRISTKFEFVPSPGNHF R T Q G R I 0 1 0 0 0 2 2 1 2 0 2 0 0 0 0 3 2 0 1 1 0 0 17 0 1970.9446 Q9Y276 Q9Y276 74 90 BCS1L Mitochondrial chaperone BCS1 yes yes 3;4 0.00085732 115.2 By MS/MS 7 0 2 2 4230300 4230300 0 13837 2817 14646 35356;35357 28262;28263 28262 2 66408 0 TQIALEPEQILR AKHESREDKIFQKFKTQIALEPEQILRYGR KFKTQIALEPEQILRYGRGIAPIWISGENI K T Q L R Y 1 1 0 0 0 2 2 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1409.7878 Q16342 Q16342 246 257 PDCD2 Programmed cell death protein 2 yes yes 2 6.9973E-05 161.19 By MS/MS 7 0 1 1 806280 806280 0 13838 1545 14647 35358 28264 28264 1 12657 0 TQIDGQLFLIK IQSLLGASESISKNKTQIDGQLFLIKHLLI SKNKTQIDGQLFLIKHLLILREQIAPFHTE K T Q I K H 0 0 0 1 0 2 0 1 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1274.7234 Q96JB2 Q96JB2 604 614 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 8.5499E-07 192.64 By MS/MS 4 0 1 1 392120 392120 0 13839 2176 14648 35359 28265 28265 1 36901 0 TQIDHYVGIAR ELLIFSVPIVYEKYKTQIDHYVGIARDQTK EKYKTQIDHYVGIARDQTKSIVEKIQAKLP K T Q A R D 1 1 0 1 0 1 0 1 1 2 0 0 0 0 0 0 1 0 1 1 0 0 11 0 1271.6622 O95197 O95197 999 1009 RTN3 Reticulon-3 yes yes 2;3 0.00052347 131.09 By MS/MS 8.5 0.5 2 2 4 4084400 4084400 0 13840 393 14649 35360;35361;35362;35363 28266;28267;28268;28269 28269 4 68899 0 TQIVTEIISEIR LVERLLHIIIDDNKRTQIVTEIISEIRAPI NKRTQIVTEIISEIRAPIVTVGVNNDPADV R T Q I R A 0 1 0 0 0 1 2 0 0 4 0 0 0 0 0 1 2 0 0 1 0 0 12 0 1400.7875 Q9BPX3 Q9BPX3 459 470 NCAPG Condensin complex subunit 3 yes yes 2 0.00038499 138.42 By MS/MS 4 0 1 1 66982 66982 0 13841 2279 14650 35364 28270;28271 28270 2 6303.4 0 TQKTGGADQSLQQGEGSK VMLYAAEMIPKLKTRTQKTGGADQSLQQGE TGGADQSLQQGEGSKKGKGKKKK_______ R T Q S K K 1 0 0 1 0 4 1 4 0 0 1 2 0 0 0 2 2 0 0 0 0 0 18 1 1818.8708 P09132 P09132 119 136 SRP19 Signal recognition particle 19 kDa protein yes yes 3 0.00017811 150.01 By MS/MS 10 0 1 1 140140 140140 0 13842 533 14651 35365 28272 28272 1 7553 0 TQLAVCQQR FQKVLQLYPNNKAAKTQLAVCQQRIRRQLA NNKAAKTQLAVCQQRIRRQLAREKKLYANM K T Q Q R I 1 1 0 0 1 3 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1102.5553 Q02790 Q02790 391 399 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.00094065 134.77 By MS/MS By matching 6 0 2 1 1 6110500 6089200 21318 13843 1279 14652 35366;35367 28273 28273 1 41859 21845 TQLQLDER GGIEICITFPTEYVKTQLQLDERSHPPRYR FPTEYVKTQLQLDERSHPPRYRGIGDCVRQ K T Q E R S 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 1001.5142 P53007 P53007 51 58 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0067199 117.53 By MS/MS By matching 8.33 0.471 2 1 2 1 20189000 20032000 157160 13844 1026 14653 35368;35369;35370 28274 28274 1 255260 212080 TQLQLDERSHPPR GGIEICITFPTEYVKTQLQLDERSHPPRYR VKTQLQLDERSHPPRYRGIGDCVRQTVRSH K T Q P R Y 0 2 0 1 0 2 1 0 1 0 2 0 0 0 2 1 1 0 0 0 0 0 13 1 1575.8118 P53007 P53007 51 63 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.019785 106.67 By MS/MS 8 0 1 1 533690 533690 0 13845 1026 14654 35371 28275 28275 1 6737.7 0 TQMSSCVAK WNFTTPRDEYIEQLKTQMSSCVAKWLQDEM YIEQLKTQMSSCVAKWLQDEMFHSDFQHHN K T Q A K W 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0 2 1 0 0 1 0 0 9 0 1010.4525 Q14008 Q14008 1198 1206 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.027094 85.862 By MS/MS 2 0 1 1 292430 292430 0 13846 1417 14655 35372 28276 28276 1 98913 0 TQMTSAVR NNAENLFRAFLGELKTQMTSAVREPKLPVL AFLGELKTQMTSAVREPKLPVLAGCLKGLS K T Q V R E 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 0 8 0 892.44365 P78527 P78527 206 213 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.041116 85.862 By MS/MS 2 0 1 1 305760 305760 0 13847 1225 14656 35373 28277 28277 1 103420 0 TQNLPNCQLISR DPSSSKTRQIISTIRTQNLPNCQLISRSHY TIRTQNLPNCQLISRSHYSPIYLSFVMLLA R T Q S R S 0 1 2 0 1 2 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 12 0 1442.73 P37268 P37268 368 379 FDFT1 Squalene synthase yes yes 2 0.00080035 128.88 By MS/MS 8 1.58 1 1 1 1 4 9412600 9412600 0 13848 845 14657 35374;35375;35376;35377 28278;28279 28278 2 149160 0 TQNNLESDYLAR GLPLYPDPSRVPGTKTQNNLESDYLARDGP GTKTQNNLESDYLARDGPSSNSSFHSSEEE K T Q A R D 1 1 2 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 12 0 1422.6739 Q6ZSR9 Q6ZSR9 20 31 Uncharacterized protein FLJ45252 yes yes 2 0.003374 108.31 By MS/MS 3 0 1 1 182320 182320 0 13849 1746 14658 35378 28280 28280 1 3336 0 TQNVLGEK RVTPTRTEIIILATRTQNVLGEKGRRIREL IIILATRTQNVLGEKGRRIRELTAVVQKRF R T Q E K G 0 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 887.47125 P23396 P23396 55 62 RPS3 40S ribosomal protein S3 yes yes 2 0.0041527 129.42 By MS/MS By matching 8.5 0.957 1 2 2 1 4 2 89997000 89536000 460110 13850 703 14659 35379;35380;35381;35382;35383;35384 28281;28282;28283;28284 28284 4 1281900 633440 TQNVLGEKGR RVTPTRTEIIILATRTQNVLGEKGRRIREL ILATRTQNVLGEKGRRIRELTAVVQKRFGF R T Q G R R 0 1 1 0 0 1 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 10 1 1100.5938 P23396 P23396 55 64 RPS3 40S ribosomal protein S3 yes yes 2 0.0048784 123.86 By MS/MS 8 0 1 1 2521700 2521700 0 13851 703 14660 35385 28285 28285 1 31836 0 TQQLLER KEKIDIGLPPPKVSRTQQLLERKQAIQELR LPPPKVSRTQQLLERKQAIQELRANVEEER R T Q E R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 886.48723 Q96DV4 Q96DV4 100 106 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.009725 136.27 By MS/MS 7 0 1 1 6041700 6041700 0 13852 2138 14661 35386 28286 28286 1 94844 0 TQRPADVIFATVR MSKDSLLGDKGQTARTQRPADVIFATVREL ARTQRPADVIFATVRELVSGGRSVRFSEAE R T Q V R E 2 2 0 1 0 1 0 0 0 1 0 0 0 1 1 0 2 0 0 2 0 0 13 1 1472.81 P33993 P33993 654 666 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 0.0055046 136.93 By MS/MS 4.5 0.5 2 2 4 11727000 11727000 0 13853 808 14662 35387;35388;35389;35390 28287;28288 28287 2 493660 0 TQSDAGEFQLPFDPR TSPNAIIGKFQFTVRTQSDAGEFQLPFDPR TQSDAGEFQLPFDPRNEIYILFNPWCPEDI R T Q P R N 1 1 0 2 0 2 1 1 0 0 1 0 0 2 2 1 1 0 0 0 0 0 15 0 1706.79 P22735 P22735 226 240 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 2 0.0016827 122.42 By matching By MS/MS 3.5 0.5 1 1 1 1 193610 120720 72893 13854 697 14663 35391;35392 28289 28289 1 11360 9278.3 TQSILFNR IVDGPDPENIILILKTQSILFNRHKEDLQP NIILILKTQSILFNRHKEDLQPYKYAGYPM K T Q N R H 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 977.52943 O75165 O75165 1375 1382 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0046706 127.02 By MS/MS 2 0 1 1 606000 606000 0 13855 302 14664 35393 28290 28290 1 204970 0 TQSLSLAVIPEGK DDYFATLRELEATLRTQSLSLAVIPEGKIM LRTQSLSLAVIPEGKIMNNTYYQECLFYLH R T Q G K I 1 0 0 0 0 1 1 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 13 0 1341.7504 Q68DK2 Q68DK2 2141 2153 ZFYVE26 Zinc finger FYVE domain-containing protein 26 yes yes 2 0.0022898 129.74 By MS/MS 2 0 1 1 198590 198590 0 13856 1673 14665 35394 28291 28291 1 67170 0 TQSTWVDSFFR GRQDKAVFVPDIYSRTQSTWVDSFFRQNGY IYSRTQSTWVDSFFRQNGYLEFDALSRLGI R T Q F R Q 0 1 0 1 0 1 0 0 0 0 0 0 0 2 0 2 2 1 0 1 0 0 11 0 1372.6412 O94874 O94874 252 262 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00022319 141.1 By MS/MS 4.5 0.5 1 1 2 430720 430720 0 13857 372 14666 35395;35396 28292;28293;28294 28293 3 35043 0 TQTAISVVEEDLK EKMKNQIKQMMDVSRTQTAISVVEEDLKLL SRTQTAISVVEEDLKLLQLKLRASVSTKCN R T Q L K L 1 0 0 1 0 1 2 0 0 1 1 1 0 0 0 1 2 0 0 2 0 0 13 0 1431.7457 Q5JRA6 Q5JRA6 1460 1472 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 2.4568E-08 222.72 By MS/MS 2 0.816 1 1 1 3 335780 335780 0 13858 1606 14667 35397;35398;35399 28295;28296 28295 2 77100 0 TQTILFYGR FNANHPFLFFIRHNKTQTILFYGRVCSP__ FIRHNKTQTILFYGRVCSP___________ K T Q G R V 0 1 0 0 0 1 0 1 0 1 1 0 0 1 0 0 2 0 1 0 0 0 9 0 1097.5869 Q96P63 Q96P63 393 401 SERPINB12 Serpin B12 yes yes 2 0.00059678 143.73 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 921320 552640 368670 13859 2207 14668 35400;35401 28297;28298 28298 2 52007 46927 TQTPPLGQTPQLGLK QPQITMIPPSAQPPRTQTPPLGQTPQLGLK TQTPPLGQTPQLGLKTNPPLIQEKPAKTSK R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 P78344 P78344 506 520 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 5.8735E-05 190.85 By MS/MS 5 0.816 1 1 1 3 16592000 16592000 0 13860 1219 14669 35402;35403;35404 28299;28300 28300 2 1283600 0 TQTPPVEENVTQK MEEQHKCSSKSLEHKTQTPPVEENVTQKIS HKTQTPPVEENVTQKISDLEICADEFPGSS K T Q Q K I 0 0 1 0 0 2 2 0 0 0 0 1 0 0 2 0 3 0 0 2 0 0 13 0 1469.7362 Q6P1Q9 Q6P1Q9 152 164 METTL2B Methyltransferase-like protein 2B yes yes 2 0.00084718 128.88 By MS/MS 7 0 1 1 624430 624430 0 13861 1703 14670 35405 28301 28301 1 9802.4 0 TQTVENVEHLQTR EAFGVLRPVCVQLTKTQTVENVEHLQTRLQ TKTQTVENVEHLQTRLQAVSDSALQELQQY K T Q T R L 0 1 1 0 0 2 2 0 1 0 1 0 0 0 0 0 3 0 0 2 0 0 13 0 1553.7798 O43156 O43156 24 36 TTI1 TELO2-interacting protein 1 homolog yes yes 2 0.0016318 114.72 By MS/MS 4 0 1 1 643540 643540 0 13862 192 14671 35406 28302 28302 1 60561 0 TQVAGGQLSFK MASEDIAKLAETLAKTQVAGGQLSFKGKSL TLAKTQVAGGQLSFKGKSLKLNTAEDAKDV K T Q F K G 1 0 0 0 0 2 0 2 0 0 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1134.6033 P46060 P46060 16 26 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 9.14E-05 152.64 By MS/MS 4.5 0.5 1 1 2 8601700 8601700 0 13863 908 14672 35407;35408 28303;28304 28304 2 174230 0 TQVELLEAPTPALKR DNYFLVGPYTEQGVRTQVELLEAPTPALKR TQVELLEAPTPALKRTLDSMNSKGCKVYFG R T Q K R T 2 1 0 0 0 1 2 0 0 0 3 1 0 0 2 0 2 0 0 1 0 0 15 1 1664.9461 P13807 P13807 75 89 GYS1 Glycogen [starch] synthase, muscle yes yes 3 0.00076271 121.18 By MS/MS 4.5 0.5 1 1 2 2086500 2086500 0 13864 607 14673 35409;35410 28305 28305 1 112860 0 TQVLSPDSLFTAK GAPPPPPQRNASYLKTQVLSPDSLFTAKFV LKTQVLSPDSLFTAKFVAYNEEEEEEDCSL K T Q A K F 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 2 2 0 0 1 0 0 13 0 1405.7453 P55196 P55196 1717 1729 MLLT4 Afadin yes yes 2 0.00023977 158.56 By MS/MS 2 0 1 1 227420 227420 0 13865 1057 14674 35411 28306 28306 1 76922 0 TQVVAGTNYYIK KTNETYGKLEAVQYKTQVVAGTNYYIKVRA QYKTQVVAGTNYYIKVRAGDNKYMHLKVFK K T Q I K V 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 2 2 0 0 12 0 1355.7085 P01040 P01040 45 56 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 1.4824E-28 270.36 By MS/MS By MS/MS 6.22 3.26 1 1 1 1 1 1 1 2 1 8 1601000 663890 937060 13866 449 14675 35412;35413;35414;35415;35416;35417;35418;35419;35420 28307;28308;28309;28310;28311;28312;28313 28311 7 35781 889070 TREDNDLDSQVSQEGLGPVLQPQPK FHRFDDVWPMDPHPRTREDNDLDSQVSQEG VSQEGLGPVLQPQPKSYFKSISVTKITKPD R T R P K S 0 1 1 3 0 4 2 2 0 0 3 1 0 0 3 2 1 0 0 2 0 0 25 1 2749.3519 O00165 O00165 181 205 HAX1 HCLS1-associated protein X-1 yes yes 3 4.083E-10 200.2 By MS/MS 7.5 0.5 1 1 2 6588900 6588900 0 13867 86 14676 35421;35422 28314;28315;28316;28317 28314 4 96343 0 TREEIQEVR RYHGHSMSDPGVSYRTREEIQEVRSKSDPI PGVSYRTREEIQEVRSKSDPIMLLKDRMVN R T R V R S 0 2 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 9 1 1158.5993 P08559;P29803 P08559 303 311 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 0.00068944 132.88 By MS/MS By matching 7.33 0.471 4 2 4 2 20360000 20024000 335820 13868 524 14677 35423;35424;35425;35426;35427;35428 28318;28319 28318 2 311730 604800 TREGNDLYHEMIESGVINLK KAHGGYSVFAGVGERTREGNDLYHEMIESG DLYHEMIESGVINLKDATSKVALVYGQMNE R T R L K D 0 1 2 1 0 0 3 2 1 2 2 1 1 0 0 1 1 0 1 1 0 0 20 1 2317.1372 P06576 P06576 240 259 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3;4 1.3743E-05 168.99 By MS/MS 6 0 2 2 9948000 9948000 0 13869 497 14678 35429;35430 28320;28321 28320 2 68384 0 TREGNDLYHEMIESGVINLKDATSK KAHGGYSVFAGVGERTREGNDLYHEMIESG MIESGVINLKDATSKVALVYGQMNEPPGAR R T R S K V 1 1 2 2 0 0 3 2 1 2 2 2 1 0 0 2 2 0 1 1 0 0 25 2 2819.376 P06576 P06576 240 264 ATP5B ATP synthase subunit beta, mitochondrial yes yes 4 2.7515E-10 199.94 By MS/MS 6 0 1 1 2684800 2684800 0 13870 497 14679 35431 28322 28322 1 18456 0 TRELEEISQQK IIHSVVLSVLDKNQRTRELEEISQQKNAAK KNQRTRELEEISQQKNAAKDNSLDTEVAYL R T R Q K N 0 1 0 0 0 2 3 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 1 1359.6994 Q9P1Q0 Q9P1Q0 486 496 VPS54 Vacuolar protein sorting-associated protein 54 yes yes 2 0.050941 90.709 By MS/MS 2 0 1 1 11597000 11597000 0 13871 2671 14680 35432 28323 28323 1 3922500 0 TRELQSMADQEK FRSLLINAVEASCIRTRELQSMADQEKISP CIRTRELQSMADQEKISPAALKKTLLDRVK R T R E K I 1 1 0 1 0 2 2 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 12 1 1434.6773 Q96C36 Q96C36 265 276 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.00057113 155.99 By MS/MS 8 0 1 1 930200 930200 0 13872 2120 14681 35433 28324 28324 1 11744 0 TRIEGLLAAFPK AGKAIVSRQFVEMTRTRIEGLLAAFPKLMN MTRTRIEGLLAAFPKLMNTGKQHTFVETES R T R P K L 2 1 0 0 0 0 1 1 0 1 2 1 0 1 1 0 1 0 0 0 0 0 12 1 1314.766 P48444 P48444 27 38 ARCN1 Coatomer subunit delta yes yes 2 0.046115 90.913 By MS/MS 6 0 1 1 1360800 1360800 0 13873 934 14682 35434 28325 28325 1 9354.4 0 TRLAADVGK GATSLCFVYPLDFARTRLAADVGKAGAERE PLDFARTRLAADVGKAGAEREFRGLGDCLV R T R G K A 2 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 929.52943 P05141;P12235;P12236 P05141 139 147 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3 0.0040802 102.06 By MS/MS By matching 5.86 3.44 1 1 1 2 1 1 6 1 13908000 13825000 82686 13874 487;589;588 14683 35435;35436;35437;35438;35439;35440;35441 28326;28327;28328;28329;28330 28330 5 616070 111580 TRLELEENQMKR KKLKYYTGNYDQYVKTRLELEENQMKRFHW YVKTRLELEENQMKRFHWEQDQIAHMKNYI K T R K R F 0 2 1 0 0 1 3 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 12 2 1545.7933 Q9UG63 Q9UG63 316 327 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 3 0.043309 66.393 By MS/MS 5 0 1 1 330120 330120 0 13875 2719 14684 35442 28331 28331 1153 0 3310.9 0 TRLEQEIATYR MEQQNQEYKILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 1378.7205 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550;CON__Q04695;Q04695;CON__P35900;CON__Q9D312;P35900;CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 406 416 KRT13;KRT17;KRT20;KRT14;KRT16 Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.0001129 169.58 By MS/MS By MS/MS 5.14 1.64 2 1 2 2 4 3 9993200 7139800 2853300 + 13876 39;47;57;603;51 14685 35443;35444;35445;35446;35447;35448;35449 28332;28333;28334;28335;28336 28332 5 345920 549460 TRLEQEIATYRR MEQQNQEYKILLDVKTRLEQEIATYRRLLE DVKTRLEQEIATYRRLLEGEDAHLSSSQFS K T R R R L 1 3 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 12 2 1534.8216 CON__Q04695;Q04695;CON__P35900;CON__Q9D312;P35900;CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 406 417 KRT17;KRT20;KRT14;KRT16 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 3 0.0082514 90.731 By MS/MS By matching 5 1.41 1 1 1 1 1 4 1 14382000 12106000 2275800 + 13877 39;47;57 14686 35450;35451;35452;35453;35454 28337 28337 1 456520 289680 TRNEELAQTWKR MPLQDSISLLLEAVRTRNEELAQTWKRSEQ AVRTRNEELAQTWKRSEQWATIEQLCSTVG R T R K R S 1 2 1 0 0 1 2 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 12 2 1530.7903 Q8TAT6 Q8TAT6 534 545 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 3 0.02728 79.639 By MS/MS 5 0 1 1 420410 420410 0 13878 1977 14687 35455 28338 28338 0 4216.5 0 TRNVDVYDKR RRLLISKLQDEFENRTRNVDVYDKRENPLL EFENRTRNVDVYDKRENPLLPEEEEQRAIA R T R K R E 0 2 1 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 2 0 0 10 2 1264.6524 P78344 P78344 179 188 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 0.048729 60.49 By MS/MS 4 0 1 1 503520 503520 0 13879 1219 14688 35456 28339 28339 1 47384 0 TRPVVAAGAVGLAQR GDGAGFKVAMGAFDKTRPVVAAGAVGLAQR TRPVVAAGAVGLAQRALDEATKYALERKTF K T R Q R A 4 2 0 0 0 1 0 2 0 0 1 0 0 0 1 0 1 0 0 3 0 0 15 1 1464.8525 P11310 P11310 280 294 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2;3 0.0018373 138.2 By MS/MS 7.8 0.748 2 2 1 5 11491000 11491000 0 13880 577 14689 35457;35458;35459;35460;35461 28340;28341 28341 2 179030 0 TRSLSPQK TLRRERAERLGNFCRTRSLSPQKQLSLLPN RLGNFCRTRSLSPQKQLSLLPNKDLFIWDL R T R Q K Q 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 8 1 915.51378 Q9P2P6 Q9P2P6 4277 4284 STARD9 StAR-related lipid transfer protein 9 yes yes 2 0.035409 115.46 By MS/MS 6 1.41 1 1 1 1 1 5 4104500 4104500 0 13881 2687 14690 35462;35463;35464;35465;35466 28342 28342 1 53450 0 TRVQHGSNK NYLEGIYNVPVAAVRTRVQHGSNKRRDHRN PVAAVRTRVQHGSNKRRDHRNVRIKKPDYK R T R N K R 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 9 1 1025.5366 Q16540 Q16540 70 78 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2;3 0.0039585 120.31 By MS/MS 9.5 0.5 2 2 4 729560 729560 0 13882 1550 14691 35467;35468;35469;35470 28343;28344;28345;28346 28345 4 28295 0 TSAEAPSHHLQQQQQQQR GGNSSSSSSVVIPTRTSAEAPSHHLQQQQQ EAPSHHLQQQQQQQRLMKSESMPVQLNKGL R T S Q R L 2 1 0 0 0 7 1 0 2 0 1 0 0 0 1 2 1 0 0 0 0 0 18 0 2101.0049 Q92609 Q92609 499 516 TBC1D5 TBC1 domain family member 5 yes yes 3 0.0014946 108.36 By MS/MS 4.5 0.5 1 1 2 570330 570330 0 13883 2062 14692 35471;35472 28347 28347 1 45284 0 TSALQEEADSIQR EVEHKIKFCRQFHEKTSALQEEADSIQRNE EKTSALQEEADSIQRNELLLNQEVNKGVKE K T S Q R N 2 1 0 1 0 2 2 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 13 0 1446.6951 Q8WXH0 Q8WXH0 2952 2964 SYNE2 Nesprin-2 yes yes 2 2.8607E-05 184.87 By MS/MS 1 0 1 1 76234 76234 0 13884 2039 14693 35473 28348 28348 1 18370 0 TSALSDETK PYYKDILPCLDGYLKTSALSDETKNNWEVS LDGYLKTSALSDETKNNWEVSALSRAAQKG K T S T K N 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 9 0 950.45566 P78527 P78527 802 810 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0013614 129.42 By MS/MS 2 0.816 1 1 1 3 1233900 1233900 0 13885 1225 14694 35474;35475;35476 28349 28349 1 297990 0 TSALTQGLER ______________________________ ______________________________ M T S E R I 1 1 0 0 0 1 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 10 0 1074.5669 Q0VGL1 Q0VGL1 2 11 LAMTOR4 Ragulator complex protein LAMTOR4;Ragulator complex protein LAMTOR4, N-terminally processed yes yes 2 0.00028488 143.5 By MS/MS 10 0 1 1 1142300 1142300 0 13886 1321 14695 35477 28350 28350 1 61568 0 TSANVTIR HHSNTRDTVKQGISRTSANVTIRKGPHEKE VKQGISRTSANVTIRKGPHEKELLQSKTAL R T S I R K 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 1 0 0 8 0 860.47158 Q8WWK9 Q8WWK9 275 282 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.0061525 120.15 By MS/MS 4 0 1 1 1315900 1315900 0 13887 2035 14696 35478 28351 28351 1 123840 0 TSAPITCELLNK IQEALREHSNPNYDKTSAPITCELLNKQVK YDKTSAPITCELLNKQVKVSPDMAIFITMN K T S N K Q 1 0 1 0 1 0 1 0 0 1 2 1 0 0 1 1 2 0 0 0 0 0 12 0 1345.6912 Q14204 Q14204 1993 2004 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.3037E-12 236.32 By MS/MS 1.5 0.5 1 1 2 3598300 3598300 0 13888 1433 14697 35479;35480 28352;28353 28353 2 1016500 0 TSAQAASSQSANK VENVRAKNSSSTSSRTSAQAASSQSANKTS SRTSAQAASSQSANKTSPLVLDSNTVTQGH R T S N K T 4 0 1 0 0 2 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 13 0 1249.5899 Q92545 Q92545 1247 1259 TMEM131 Transmembrane protein 131 yes yes 2 0.00086463 128.57 By MS/MS 1 0 1 1 19563 19563 0 13889 2053 14698 35481 28354 28354 1 4714.1 0 TSAQVVLDGLVDK LHIVALIAQKGNFSKTSAQVVLDGLVDKIG SKTSAQVVLDGLVDKIGDVKCGNNAKEAMT K T S D K I 1 0 0 2 0 1 0 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 13 0 1343.7296 Q14008 Q14008 677 689 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.1571E-07 225.63 By MS/MS 2.5 0.5 1 1 2 1204100 1204100 0 13890 1417 14699 35482;35483 28355 28355 1 391590 0 TSASDVTNIYPGDAGK NCCIERKKARDEGKKTSASDVTNIYPGDAG SASDVTNIYPGDAGKAGDQLVPDNLKETDK K T S G K A 2 0 1 2 0 0 0 2 0 1 0 1 0 0 1 2 2 0 1 1 0 0 16 0 1594.7475 Q15042 Q15042 536 551 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 9.8595E-05 186.51 By MS/MS 3 0 1 1 633170 633170 0 13891 1479 14700 35484 28356 28356 1 11585 0 TSASIILR ICDDELILIKNTKARTSASIILRGANDFMC IKNTKARTSASIILRGANDFMCDEMERSLH R T S L R G 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 2 1 0 0 0 0 0 8 0 859.51272 P17987 P17987 371 378 TCP1 T-complex protein 1 subunit alpha yes yes 2 2.9395E-06 188.81 By MS/MS 5.12 2.71 1 1 1 1 1 1 1 1 8 58808000 58808000 0 13892 648 14701 35485;35486;35487;35488;35489;35490;35491;35492 28357;28358;28359;28360;28361;28362 28360 6 770250 0 TSATWLALSR EADTTENQSGVSFDKTSATWLALSRIAGLC VSFDKTSATWLALSRIAGLCNRAVFQANQE K T S S R I 2 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 2 1 0 0 0 0 10 0 1104.5928 P05023 P05023 414 423 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 1.1634E-10 214.83 By MS/MS 3 1.41 1 1 1 1 1 5 5775000 5775000 0 13893 481 14702 35493;35494;35495;35496;35497 28363;28364;28365;28366 28363 4 727600 0 TSCALTIHAIGR KLNGWYMEKEEPIYKTSCALTIHAIGRYSP IYKTSCALTIHAIGRYSPDVLKNHAKEVLP K T S G R Y 2 1 0 0 1 0 0 1 1 2 1 0 0 0 0 1 2 0 0 0 0 0 12 0 1298.6765 Q5VYK3 Q5VYK3 1457 1468 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.042984 93.096 By MS/MS 2 0 1 1 0 0 0 13894 1656 14703 35498 28367 28367 1 0 0 TSCGSPNYAAPEVISGR DFGLSNMMSDGEFLRTSCGSPNYAAPEVIS CGSPNYAAPEVISGRLYAGPEVDIWSCGVI R T S G R L 2 1 1 0 1 0 1 2 0 1 0 0 0 0 2 3 1 0 1 1 0 0 17 0 1764.8101 P54646;Q13131 P54646 172 188 PRKAA2;PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-2;5-AMP-activated protein kinase catalytic subunit alpha-1 yes no 2 0.00016182 188.63 By MS/MS 5.5 0.5 1 1 2 2759100 2759100 0 13895 1045 14704 35499;35500 28368 28368 1 20427 0 TSDCAYFILVDR SLITQKPLPVSLHVRTSDCAYFILVDRYLS HVRTSDCAYFILVDRYLSWFLPTEGSVPPP R T S D R Y 1 1 0 2 1 0 0 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 12 0 1458.6813 Q9NXE4 Q9NXE4 218 229 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 7.256E-05 185.77 By MS/MS 4.5 0.5 1 1 2 599790 599790 0 13896 2624 14705 35501;35502 28369;28370 28370 2 31347 0 TSDIFEADIANDVK KAKHRIAHKPHSKPKTSDIFEADIANDVKS KTSDIFEADIANDVKSKDLLADKELWARLE K T S V K S 2 0 1 3 0 0 1 0 0 2 0 1 0 1 0 1 1 0 0 1 0 0 14 0 1536.7308 O94763 O94763 187 200 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 2 1.7208E-07 245.13 By MS/MS 4.5 0.5 1 1 2 2502200 2502200 0 13897 363 14706 35503;35504 28371 28371 1 54293 0 TSDIFGSPVTATSR TPVQTRQHLNPPGGKTSDIFGSPVTATSRL KTSDIFGSPVTATSRLAHPNKPKDHVFLCE K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 Q9H910 Q9H910 91 104 HN1L Hematological and neurological expressed 1-like protein yes yes 2 0.0004479 174.24 By MS/MS 9 0 1 1 793630 793630 0 13898 2478 14707 35505 28372 28372 1 15619 0 TSEFTAAFVGR LWYVMQVVSQLLDPRTSEFTAAFVGRLVST LDPRTSEFTAAFVGRLVSTLISKAGRELGE R T S G R L 2 1 0 0 0 0 1 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 11 0 1184.5826 Q96P70 Q96P70 755 765 IPO9 Importin-9 yes yes 2 0.00014496 147.95 By MS/MS 3.5 0.5 1 1 2 818460 818460 0 13899 2208 14708 35506;35507 28373;28374 28373 2 47621 0 TSESLCQNNMVILK KHWPTFISDIVGASRTSESLCQNNMVILKL RTSESLCQNNMVILKLLSEEVFDFSSGQIT R T S L K L 0 0 2 0 1 1 1 0 0 1 2 1 1 0 0 2 1 0 0 1 0 0 14 0 1635.796 O14980 O14980 159 172 XPO1 Exportin-1 yes yes 2 8.4724E-12 257.8 By MS/MS 4 0 1 1 1871200 1871200 0 13900 153 14709 35508 28375 28375 1 176090 0 TSESTGSLPSPFLR MQITILTCRHVTDYKTSESTGSLPSPFLRA KTSESTGSLPSPFLRALKTQNFKDSACCPL K T S L R A 0 1 0 0 0 0 1 1 0 0 2 0 0 1 2 4 2 0 0 0 0 0 14 0 1477.7413 O95456 O95456 177 190 PSMG1 Proteasome assembly chaperone 1 yes yes 2 0.002532 110.93 By MS/MS 8 0 1 1 1095900 1095900 0 13901 412 14710 35509 28376 28376 1 13836 0 TSEVNCYR YRCGETGHVAINCSKTSEVNCYRCGESGHL VAINCSKTSEVNCYRCGESGHLARECTIEA K T S Y R C 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 8 0 1027.4393 P62633 P62633 153 160 CNBP Cellular nucleic acid-binding protein yes yes 2 2.371E-06 191.63 By MS/MS By matching 9.33 0.471 2 1 2 1 19069000 19009000 59813 13902 1163 14711 35510;35511;35512 28377;28378 28378 2 499670 136390 TSFFQALGITTK EVTVPAQNTGLGPEKTSFFQALGITTKISR PEKTSFFQALGITTKISRGTIEILSDVQLI K T S T K I 1 0 0 0 0 1 0 1 0 1 1 1 0 2 0 1 3 0 0 0 0 0 12 0 1312.7027 P05388;Q8NHW5 P05388 135 146 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2 1.1518E-06 199.8 By MS/MS 7 0 1 1 388270 388270 0 13903 491 14712 35513 28379 28379 1 6095.1 0 TSFHALTSILK RMQLSGEGAKTREYKTSFHALTSILKAEGL REYKTSFHALTSILKAEGLRGIYTGLSAGL K T S L K A 1 0 0 0 0 0 0 0 1 1 2 1 0 1 0 2 2 0 0 0 0 0 11 0 1216.6816 Q02978 Q02978 63 73 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 0.00010764 151.22 By MS/MS 8 0 2 2 3937600 3937600 0 13904 1284 14713 35514;35515 28380;28381 28380 2 49711 0 TSFLDDAFR TEFIMNEYKDRKITRTSFLDDAFRKNLESA DRKITRTSFLDDAFRKNLESALRFGNPLLV R T S F R K 1 1 0 2 0 0 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 9 0 1070.5033 Q14204 Q14204 3612 3620 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00081181 137.13 By MS/MS 2 0.816 1 1 1 3 589180 589180 0 13905 1433 14714 35516;35517;35518 28382;28383 28382 2 150350 0 TSFLDDAFRK TEFIMNEYKDRKITRTSFLDDAFRKNLESA RKITRTSFLDDAFRKNLESALRFGNPLLVQ R T S R K N 1 1 0 2 0 0 0 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 10 1 1198.5982 Q14204 Q14204 3612 3621 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0020061 131.62 By MS/MS 2.5 1.12 1 1 1 1 4 2996400 2996400 0 13906 1433 14715 35519;35520;35521;35522 28384;28385;28386 28384 2 783360 0 TSFLLNLR APRCPENAFFLDHVRTSFLLNLRRQLPQNV FFLDHVRTSFLLNLRRQLPQNVLDTSWPTP R T S L R R 0 1 1 0 0 0 0 0 0 0 3 0 0 1 0 1 1 0 0 0 0 0 8 0 962.55492 O00159 O00159 814 821 MYO1C Unconventional myosin-Ic yes yes 2 0.00017065 172.14 By MS/MS 4 0 1 1 571790 571790 0 13907 85 14716 35523 28387 28387 1 53809 0 TSFLTELIDR KELLKHKFITRYTKKTSFLTELIDRYKRWK RYTKKTSFLTELIDRYKRWKSEGHGEESSS K T S D R Y 0 1 0 1 0 0 1 0 0 1 2 0 0 1 0 1 2 0 0 0 0 0 10 0 1193.6292 O00506 O00506 277 286 STK25 Serine/threonine-protein kinase 25 yes yes 2 3.1545E-05 160.36 By MS/MS 6 0 1 1 190840 190840 0 13908 112 14717 35524 28388 28388 1 1311.9 0 TSFTSVSR RSFSTASAITPSVSRTSFTSVSRSGGGGGG ITPSVSRTSFTSVSRSGGGGGGGFGRVSLA R T S S R S 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 3 2 0 0 1 0 0 8 0 883.43995 CON__P13647;P13647 CON__P13647 30 37 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.525E-06 195.81 By MS/MS By MS/MS 4.9 2.7 1 1 2 1 1 1 1 1 1 8 2 13213000 8260200 4952500 + 13909 52 14718 35525;35526;35527;35528;35529;35530;35531;35532;35533;35534 28389;28390;28391;28392;28393;28394;28395 28391 7 419060 1466500 TSFVNFTDICK FVMKPPQVVRVGTKKTSFVNFTDICKLLHR GTKKTSFVNFTDICKLLHRQPKHLLAFLLA K T S C K L 0 0 1 1 1 0 0 0 0 1 0 1 0 2 0 1 2 0 0 1 0 0 11 0 1330.6227 P20042 P20042 217 227 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.6799E-06 175.49 By MS/MS 7.5 1.12 1 1 1 1 4 13790000 13790000 0 13910 668 14719 35535;35536;35537;35538 28396;28397;28398 28396 3 108630 0 TSGQTSANAHSSR VEDVLKLIDIGNSCRTSGQTSANAHSSRSH CRTSGQTSANAHSSRSHAVFQIILRRKGKL R T S S R S 2 1 1 0 0 1 0 1 1 0 0 0 0 0 0 4 2 0 0 0 0 0 13 0 1302.5913 O00139 O00139 422 434 KIF2A Kinesin-like protein KIF2A yes yes 2 1.7963E-05 190.66 By MS/MS 4.5 0.5 1 1 2 98362 98362 0 13911 82 14720 35539;35540 28399 28399 1 7818.4 0 TSIAIDTIINQK RGQRELIIGDRQTGKTSIAIDTIINQKRFN TGKTSIAIDTIINQKRFNDGSDEKKKLYCI K T S Q K R 1 0 1 1 0 1 0 0 0 4 0 1 0 0 0 1 2 0 0 0 0 0 12 0 1315.7347 P25705 P25705 219 230 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.9852E-37 280.11 By MS/MS By MS/MS 7.2 1.17 2 1 1 1 4 1 55471000 55220000 250680 13912 723 14721 35541;35542;35543;35544;35545 28400;28401;28402 28400 3 399580 256880 TSIAIDTIINQKR RGQRELIIGDRQTGKTSIAIDTIINQKRFN GKTSIAIDTIINQKRFNDGSDEKKKLYCIY K T S K R F 1 1 1 1 0 1 0 0 0 4 0 1 0 0 0 1 2 0 0 0 0 0 13 1 1471.8358 P25705 P25705 219 231 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 5.4109E-11 222.18 By MS/MS By matching 6.57 0.728 4 2 1 5 2 36691000 36615000 75218 13913 723 14722 35546;35547;35548;35549;35550;35551;35552 28403;28404 28404 2 271770 77077 TSKDTSASAVAVGLK PVDKMQLLEIITTEKTSKDTSASAVAVGLK TSKDTSASAVAVGLKQGKVIIVVKDGPGFY K T S L K Q 3 0 0 1 0 0 0 1 0 0 1 2 0 0 0 3 2 0 0 2 0 0 15 1 1433.7726 P40939 P40939 517 531 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.0072768 89.506 By MS/MS 5 0 1 1 1416500 1416500 0 13914 865 14723 35553 28405 28405 1 14206 0 TSLAALEQIQTAK QEQVEGLLAENNALRTSLAALEQIQTAKTQ LRTSLAALEQIQTAKTQELNMLREQTTGLA R T S A K T 3 0 0 0 0 2 1 0 0 1 2 1 0 0 0 1 2 0 0 0 0 0 13 0 1372.7562 Q4V328 Q4V328 340 352 GRIPAP1 GRIP1-associated protein 1 yes yes 2 4.5107E-05 161.19 By MS/MS 4 0 1 1 580430 580430 0 13915 1583 14724 35554 28406 28406 0 54622 0 TSLALDESLFR KGFAYIEFSDKESVRTSLALDESLFRGRQI ESVRTSLALDESLFRGRQIKVIPKRTNRPG R T S F R G 1 1 0 1 0 0 1 0 0 0 3 0 0 1 0 2 1 0 0 0 0 0 11 0 1250.6507 Q86U42 Q86U42 228 238 PABPN1 Polyadenylate-binding protein 2 yes yes 2 0.0071702 109.83 By MS/MS 6 0 1 1 529380 529380 0 13916 1816 14725 35555 28407 28407 1 3639.1 0 TSLAQQLQR ______________________________ ______________________________ M T S Q R L 1 1 0 0 0 3 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1043.5724 Q9H583 Q9H583 2 10 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.0024284 119.27 By MS/MS 1.5 0.5 1 1 2 483120 483120 0 13917 2451 14726 35556;35557 28408;28409 28409 2 163410 0 TSLATILDGGEENLEK STACQQLEVFSRVLRTSLATILDGGEENLE SLATILDGGEENLEKNLPEFAKMVCHGEHT R T S E K N 1 0 1 1 0 0 3 2 0 1 3 1 0 0 0 1 2 0 0 0 0 0 16 0 1688.8469 Q8IXH7 Q8IXH7 207 222 NELFCD Negative elongation factor C/D yes yes 2 1.8462E-09 225.79 By MS/MS 6 0 1 1 1044900 1044900 0 13918 1875 14727 35558 28410 28410 1 7182.8 0 TSLGPNGLDK KSHIMAAKAVANTMRTSLGPNGLDKMMVDK ANTMRTSLGPNGLDKMMVDKDGDVTVTNDG R T S D K M 0 0 1 1 0 0 0 2 0 0 2 1 0 0 1 1 1 0 0 0 0 0 10 0 1000.5189 P48643 P48643 50 59 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0068682 101.38 By MS/MS 6 0 1 1 9383700 9383700 0 13919 940 14728 35559 28411 28411 1 64506 0 TSLMNQYVNK VLLKVIILGDSGVGKTSLMNQYVNKKFSNQ SGVGKTSLMNQYVNKKFSNQYKATIGADFL K T S N K K 0 0 2 0 0 1 0 0 0 0 1 1 1 0 0 1 1 0 1 1 0 0 10 0 1196.586 P51149 P51149 22 31 RAB7A Ras-related protein Rab-7a yes yes 2 0.0019507 126.24 By MS/MS 9 0 1 1 0 0 0 13920 990 14729 35560 28412 28412 1 0 0 TSLSANNATLEK LEKMEARLNAALREKTSLSANNATLEKQLI REKTSLSANNATLEKQLIELTRTNELLKSK K T S E K Q 2 0 2 0 0 0 1 0 0 0 2 1 0 0 0 2 2 0 0 0 0 0 12 0 1247.6357 O75330 O75330 127 138 HMMR Hyaluronan mediated motility receptor yes yes 2 6.2715E-05 163.46 By MS/MS 4 0 1 1 615550 615550 0 13921 311 14730 35561 28413 28413 1 57928 0 TSLVGALAK LKKPILLEGSPGVGKTSLVGALAKASGNTL SPGVGKTSLVGALAKASGNTLVRINLSEQT K T S A K A 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 858.51747 Q9NU22 Q9NU22 1760 1768 MDN1 Midasin yes yes 2 0.014129 93.195 By MS/MS 1.5 0.5 1 1 2 737340 737340 0 13922 2580 14731 35562;35563 28414 28414 1 212680 0 TSPALHPEQK QLQITHKDPKTGKLRTSPALHPEQKADRYF TGKLRTSPALHPEQKADRYFVLYKPPPKDN R T S Q K A 1 0 0 0 0 1 1 0 1 0 1 1 0 0 2 1 1 0 0 0 0 0 10 0 1106.572 Q9H1I8 Q9H1I8 23 32 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.010664 92.838 By MS/MS 4 0 1 1 531680 531680 0 13923 2422 14732 35564 28415 28415 1 50035 0 TSQEELLAEVVQGQSR TVPQKQTLPVAPRTRTSQEELLAEVVQGQS SQEELLAEVVQGQSRTPRISPPIKEEETKG R T S S R T 1 1 0 0 0 3 3 1 0 0 2 0 0 0 0 2 1 0 0 2 0 0 16 0 1772.8905 Q6PJT7 Q6PJT7 389 404 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 2 6.0295E-11 233.52 By MS/MS 4.5 0.5 1 1 2 707500 707500 0 13924 1721 14733 35565;35566 28416 28416 1 24618 0 TSQNSELNNMQDLVEDYK IDSLKRYLDGLTAERTSQNSELNNMQDLVE NSELNNMQDLVEDYKKKYEDEINKRTAAEN R T S Y K K 0 0 3 2 0 2 2 0 0 0 2 1 1 0 0 2 1 0 1 1 0 0 18 0 2126.9426 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 248 265 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.655E-87 354.01 By MS/MS By MS/MS 3.25 0.829 1 1 2 1 3 2753400 1590900 1162500 + 13925 55 14734 35567;35568;35569;35570 28417;28418;28419 28418 46 3 149710 474720 TSQNSELNNMQDLVEDYKK IDSLKRYLDGLTAERTSQNSELNNMQDLVE SELNNMQDLVEDYKKKYEDEINKRTAAEND R T S K K K 0 0 3 2 0 2 2 0 0 0 2 2 1 0 0 2 1 0 1 1 0 0 19 1 2255.0376 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 248 266 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 3.7971E-14 199.33 By MS/MS By MS/MS 4.92 2.52 2 2 4 3 4 4 1 1 1 2 11 13 49546000 31020000 18526000 + 13926 55 14735;14736 35571;35572;35573;35574;35575;35576;35577;35578;35579;35580;35581;35582;35583;35584;35585;35586;35587;35588;35589;35590;35591;35592;35593;35594 28420;28421;28422;28423;28424;28425;28426;28427;28428;28429;28430;28431;28432;28433;28434;28435;28436;28437;28438;28439;28440;28441;28442;28443;28444 28423 46 25 2276000 6795700 TSQNSELNNMQDLVEDYKKK IDSLKRYLDGLTAERTSQNSELNNMQDLVE ELNNMQDLVEDYKKKYEDEINKRTAAENDF R T S K K Y 0 0 3 2 0 2 2 0 0 0 2 3 1 0 0 2 1 0 1 1 0 0 20 2 2383.1326 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 248 267 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.013867 75.743 By MS/MS 3 0 1 1 348950 0 348950 + 13927 55 14737 35595 28445 28445 46 1 0 44416 TSQPPVPQGEAEEDSQGK VRFRISNSSTANRVKTSQPPVPQGEAEEDS PPVPQGEAEEDSQGKEGPSGSGDSQLSASS K T S G K E 1 0 0 1 0 3 3 2 0 0 0 1 0 0 3 2 1 0 0 1 0 0 18 0 1882.8545 Q12789 Q12789 725 742 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00021689 144.18 By MS/MS 2 0 1 1 285590 285590 0 13928 1328 14738 35596 28446 28446 1 96597 0 TSQQLQLIDEQDSYIQSR SHASKDVAIDMMDSRTSQQLQLIDEQDSYI QLQLIDEQDSYIQSRADTMQNIESTIVELG R T S S R A 0 1 0 2 0 5 1 0 0 2 2 0 0 0 0 3 1 0 1 0 0 0 18 0 2151.0444 Q13190 Q13190 252 269 STX5 Syntaxin-5 yes yes 2;3 2.3736E-24 323.16 By MS/MS 7 0 2 2 3707400 3707400 0 13929 1364 14739 35597;35598 28447;28448 28447 2 58199 0 TSRPENAIIYNNNEDFQVGQAK AVELAANTKGICFIRTSRPENAIIYNNNED IIYNNNEDFQVGQAKVVLKSKDDQVTVIGA R T S A K V 2 1 4 1 0 2 2 1 0 2 0 1 0 1 1 1 1 0 1 1 0 0 22 1 2507.2041 P29401 P29401 472 493 TKT Transketolase yes yes 3 3.5118E-06 172.99 By MS/MS 5 0 1 1 1295400 1295400 0 13930 758 14740 35599 28449 28449 1 12992 0 TSSAETPTIPLGSAVEAIK HQLWLSVEALKYSMKTSSAETPTIPLGSAV ETPTIPLGSAVEAIKANCSDNEFTQALTAA K T S I K A 3 0 0 0 0 0 2 1 0 2 1 1 0 0 2 3 3 0 0 1 0 0 19 0 1870.9888 Q16891 Q16891 582 600 IMMT MICOS complex subunit MIC60 yes yes 2 1.3424E-17 263.89 By MS/MS 4.5 0.5 1 1 2 6513400 6513400 0 13931 1563 14741 35600;35601 28450 28450 1 580660 0 TSSAFVGKTPEASPEPK PGSEKDSDSMETEEKTSSAFVGKTPEASPE SAFVGKTPEASPEPKDQTLKMIKILSGEMA K T S P K D 2 0 0 0 0 0 2 1 0 0 0 2 0 1 3 3 2 0 0 1 0 0 17 1 1731.8679 Q99460 Q99460 303 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.0044344 92.773 By MS/MS 4 0 1 1 645850 645850 0 13932 2246 14742 35602 28451 28451 1 60778 0 TSSAQVEGGVHSLHSYEK VRAMMYSGELKFEKRTSSAQVEGGVHSLHS AQVEGGVHSLHSYEKRLF____________ R T S E K R 1 0 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 0 18 0 1914.9072 P12268 P12268 494 511 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.00054531 115.38 By MS/MS 6 0 1 1 2685600 2685600 0 13933 590 14743 35603 28452 28452 1 18462 0 TSSQPGFLER NYSSTSTRREHVKVKTSSQPGFLERLSETS HVKVKTSSQPGFLERLSETSGGMFVGLMAF K T S E R L 0 1 0 0 0 1 1 1 0 0 1 0 0 1 1 2 1 0 0 0 0 0 10 0 1120.5513 Q9BTV4 Q9BTV4 19 28 TMEM43 Transmembrane protein 43 yes yes 2 0.042929 83.883 By MS/MS 8 0 1 1 0 0 0 13934 2318 14744 35604 28453 28453 1 0 0 TSSSFAAAMAR KGKVMASMFYEVSTRTSSSFAAAMARLGGA VSTRTSSSFAAAMARLGGAVLSFSEATSSV R T S A R L 4 1 0 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 0 0 0 11 0 1098.5128 P27708 P27708 1976 1986 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.00011847 150.27 By MS/MS 1.67 0.471 1 2 3 1313700 1313700 0 13935 745 14745;14746 35605;35606;35607 28454;28455 28455 374 2 435930 0 TSSSQGIIR EKELLQSKTALSSVKTSSSQGIIRNKTLSR ALSSVKTSSSQGIIRNKTLSRSIASEVIAR K T S I R N 0 1 0 0 0 1 0 1 0 2 0 0 0 0 0 3 1 0 0 0 0 0 9 0 947.50361 Q8WWK9 Q8WWK9 302 310 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.0016847 125.31 By MS/MS 3 1.41 1 1 1 1 1 5 4148600 4148600 0 13936 2035 14747 35608;35609;35610;35611;35612 28456;28457 28456 1 457780 0 TSSTSSSVNSQTLNR PQRNNSSKLRSSGPRTSSTSSSVNSQTLNR TSSTSSSVNSQTLNRNQPTVYIAASPPNTD R T S N R N 0 1 2 0 0 1 0 0 0 0 1 0 0 0 0 6 3 0 0 1 0 0 15 0 1567.7438 Q9NYJ8 Q9NYJ8 348 362 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 5.7583E-13 248.19 By MS/MS By MS/MS 5 0 2 1 1 1919900 1864000 55875 13937 2634 14748 35613;35614 28458;28459 28459 2 18695 46923 TSSVFEDPVISK ELKKTQLIKAAPAGKTSSVFEDPVISKFTN AGKTSSVFEDPVISKFTNMMMIGGNKVLAR K T S S K F 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 3 1 0 0 2 0 0 12 0 1307.6609 Q9Y2R9 Q9Y2R9 82 93 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.00024969 153.1 By MS/MS 8 0 1 1 11918000 11918000 0 13938 2841 14749 35615 28460 28460 1 150460 0 TSTAPAASPNVR FRTVHGGLRLLGIRRTSTAPAASPNVRRLE IRRTSTAPAASPNVRRLEYKPIKKVMVANR R T S V R R 3 1 1 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 1 0 0 12 0 1170.5993 P11498 P11498 19 30 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0012531 120.45 By MS/MS 3 0 1 1 1419600 1419600 0 13939 580 14750 35616 28461 28461 1 25975 0 TSTILACAK RLPHLLLYGPPGTGKTSTILACAKQLYKDK PPGTGKTSTILACAKQLYKDKEFGSMVLEL K T S A K Q 2 0 0 0 1 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 9 0 963.50592 P40937 P40937 67 75 RFC5 Replication factor C subunit 5 yes yes 2 0.0027047 113.26 By MS/MS 7 0 1 1 818890 818890 0 13940 863 14751 35617 28462 28462 1 12855 0 TSTSAVPNLFVPLNTNPK SPKSKTKWTKEDGHRTSTSAVPNLFVPLNT SAVPNLFVPLNTNPKEVQEMRNKIREQNLQ R T S P K E 1 0 3 0 0 0 0 0 0 0 2 1 0 1 3 2 3 0 0 2 0 0 18 0 1899.0102 P35611 P35611 480 497 ADD1 Alpha-adducin yes yes 2 0.00023497 145.81 By MS/MS 4 0 1 1 211060 211060 0 13941 827 14752 35618 28463 28463 1 19862 0 TSTSAVR PKKLTEWFKKAFSLKTSTSAVRHAYLQCML FKKAFSLKTSTSAVRHAYLQCMLASYRGDT K T S V R H 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 7 0 720.37662 Q92616 Q92616 437 443 GCN1L1 Translational activator GCN1 yes yes 2 0.052752 89.369 By MS/MS 2 0 1 1 325550 325550 0 13942 2064 14753 35619 28464 28464 1 110110 0 TSTSQAVFR VNQDTRLDNRVIDLRTSTSQAVFRLQSGIC RVIDLRTSTSQAVFRLQSGICHLFRETLIN R T S F R L 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 2 2 0 0 1 0 0 9 0 995.50361 P14868 P14868 189 197 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.012816 95.502 By MS/MS By matching 6.75 0.829 2 1 1 3 1 9856000 9773600 82478 13943 620 14754 35620;35621;35622;35623 28465 28465 1 75547 84517 TSVDEITSGK ETTLEKLKGEIAHLKTSVDEITSGKGKLTD IAHLKTSVDEITSGKGKLTDKERHRLLEKI K T S G K G 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 10 0 1035.5084 Q53EZ4 Q53EZ4 39 48 CEP55 Centrosomal protein of 55 kDa yes yes 2 0.0068331 101.46 By MS/MS 6 0 1 1 312910 312910 0 13944 1586 14755 35624 28466 28466 1 2151 0 TSVETALR DPRPCEVENAVESWRTSVETALRAYVKEHY NAVESWRTSVETALRAYVKEHYPNGVCTVY R T S L R A 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 8 0 875.47125 P47755 P47755 122 129 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 2 0.036301 87.696 By MS/MS 7 0 1 1 634320 634320 0 13945 925 14756 35625 28467 28467 1 9957.8 0 TSVFLVR CSDAVPGGLFGFAARTSVFLVRVGPGAGES GLFGFAARTSVFLVRVGPGAGESPGTPPFR R T S V R V 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 7 0 820.48069 Q8TEQ6 Q8TEQ6 34 40 GEMIN5 Gem-associated protein 5 yes yes 2 0.002658 167.25 By MS/MS 4.5 2.69 1 1 1 1 4 1727200 1727200 0 13946 2002 14757 35626;35627;35628;35629 28468;28469 28468 2 63184 0 TSVLAAANPIESQWNPK LSIAKAGIICQLNARTSVLAAANPIESQWN VLAAANPIESQWNPKKTTIENIQLPHTLLS R T S P K K 3 0 2 0 0 1 1 0 0 1 1 1 0 0 2 2 1 1 0 1 0 0 17 0 1824.937 P33991 P33991 611 627 MCM4 DNA replication licensing factor MCM4 yes yes 2 3.4707E-07 217.12 By MS/MS 4.5 0.5 1 1 2 1356100 1356100 0 13947 806 14758 35630;35631 28470 28470 1 109730 0 TSVVGLFLR DLSDSFSGTEPEVHKTSVVGLFLRHMILAY EPEVHKTSVVGLFLRHMILAYSKLSFSQVF K T S L R H 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 9 0 990.58622 Q9UJX4 Q9UJX4 129 137 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2 0.002202 118.74 By MS/MS 5 0 1 1 205700 205700 0 13948 2753 14759 35632 28471 28471 1 2063 0 TSYAQHQQVR FCVGFTKKRNNQIRKTSYAQHQQVRQIRKK NQIRKTSYAQHQQVRQIRKKMMEIMTREVQ K T S V R Q 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1216.5949 P61247 P61247 153 162 RPS3A 40S ribosomal protein S3a yes yes 2 2.2632E-10 204.42 By MS/MS By matching 8 0.577 1 4 1 5 1 14023000 13985000 37414 13949 1118 14760 35633;35634;35635;35636;35637;35638 28472;28473;28474;28475;28476;28477 28475 6 180700 50489 TSYEEFTHK FNMCGFECRILPKCRTSYEEFTHKDGVWNL ILPKCRTSYEEFTHKDGVWNLQNEVTKERT R T S H K D 0 0 0 0 0 0 2 0 1 0 0 1 0 1 0 1 2 0 1 0 0 0 9 0 1140.5088 Q6P2Q9 Q6P2Q9 1202 1210 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.053626 74.376 By MS/MS 2 0 1 1 402110 402110 0 13950 1708 14761 35639 28478 28478 1 136010 0 TSYLTELIDR KELLKHKFIVKNSKKTSYLTELIDRFKRWK KNSKKTSYLTELIDRFKRWKAEGHSDDESD K T S D R F 0 1 0 1 0 0 1 0 0 1 2 0 0 0 0 1 2 0 1 0 0 0 10 0 1209.6241 Q9P289;Q9Y6E0 Q9P289 281 290 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes no 2 0.00059151 131.52 By MS/MS 6 0 1 1 448410 448410 0 13951 2680 14762 35640 28479 28479 1 3082.5 0 TTAENEFVMLK VEDFKNKYEDEINKRTTAENEFVMLKKDVD INKRTTAENEFVMLKKDVDAAYMNKVELEA R T T L K K 1 0 1 0 0 0 2 0 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1281.6275 CON__P13647;P13647;CON__Q922U2 CON__P13647 266 276 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.2948E-08 197.27 By MS/MS By MS/MS 4.62 2.8 2 2 3 2 2 1 1 1 2 6 10 7396400 4677400 2719000 + 13952 52;74 14763;14764 35641;35642;35643;35644;35645;35646;35647;35648;35649;35650;35651;35652;35653;35654;35655;35656 28480;28481;28482;28483;28484;28485;28486;28487;28488;28489;28490;28491;28492;28493;28494;28495;28496 28482 42 17 473730 1784300 TTAENEFVMLKK VEDFKNKYEDEINKRTTAENEFVMLKKDVD NKRTTAENEFVMLKKDVDAAYMNKVELEAK R T T K K D 1 0 1 0 0 0 2 0 0 0 1 2 1 1 0 0 2 0 0 1 0 0 12 1 1409.7225 CON__P13647;P13647;CON__Q922U2 CON__P13647 266 277 KRT5 Keratin, type II cytoskeletal 5 no no 2;3 2.7965E-19 224.75 By MS/MS By MS/MS 3.53 1.68 3 1 5 4 4 8 9 31555000 21099000 10456000 + 13953 52;74 14765;14766 35657;35658;35659;35660;35661;35662;35663;35664;35665;35666;35667;35668;35669;35670;35671;35672;35673 28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508 28507 42 11 1768200 4028700 TTANAIYCPPK LSNLPKARAALTSARTTANAIYCPPKLQAT TSARTTANAIYCPPKLQATLDMQSGIIHAA R T T P K L 2 0 1 0 1 0 0 0 0 1 0 1 0 0 2 0 2 0 1 0 0 0 11 0 1234.6016 O00231 O00231 195 205 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 1.9919E-05 163.94 By MS/MS 7 0 1 1 1970500 1970500 0 13954 93 14767 35674 28509 28509 1 30933 0 TTASTSQVR ______________________________ ______________________________ M T T V R Q 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 3 0 0 1 0 0 9 0 949.48287 P02794 P02794 2 10 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 2 0.0088377 104.2 By MS/MS By matching 9 0 2 1 1 714520 652720 61803 13955 461 14768 35675;35676 28510 28510 1 12846 140930 TTCSRQFTSSSSMKGSCGIGGGIGGGSSR ______________________________ GSCGIGGGIGGGSSRISSVLAGGSCRAPST M T T S R I 0 2 0 0 2 1 0 8 0 2 0 1 1 1 0 8 3 0 0 0 0 0 29 2 2866.2756 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 2 30 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 3 0.0012903 59.211 By MS/MS 10 0 1 1 153990 0 153990 + 13956 39;47 14769 35677 28511 28511 22 1 0 197150 TTDDTTTDNYIAQGK SSNVNKQEENGVFIKTTDDTTTDNYIAQGK TTDDTTTDNYIAQGKRKSNEMITNLGKKQK K T T G K R 1 0 1 3 0 1 0 1 0 1 0 1 0 0 0 0 5 0 1 0 0 0 15 0 1642.7322 Q7Z2T5 Q7Z2T5 595 609 TRMT1L TRMT1-like protein yes yes 2 6.7308E-24 281.17 By MS/MS 4 0 1 1 688740 688740 0 13957 1777 14770 35678 28512 28512 1 64815 0 TTDGVYEGVAIGGDR RSGGMSNELNNIISRTTDGVYEGVAIGGDR TTDGVYEGVAIGGDRYPGSTFMDHVLRYQD R T T D R Y 1 1 0 2 0 0 1 4 0 1 0 0 0 0 0 0 2 0 1 2 0 0 15 0 1508.7107 P53396 P53396 677 691 ACLY ATP-citrate synthase yes yes 2 2.2868E-05 198.57 By MS/MS 3.5 0.5 1 1 2 1645300 1645300 0 13958 1030 14771 35679;35680 28513 28513 1 144930 0 TTDGYLLR VKKWQTMIEAHVDVKTTDGYLLRLFCVGFT EAHVDVKTTDGYLLRLFCVGFTKKRNNQIR K T T L R L 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 2 0 1 0 0 0 8 0 937.4869 P61247 P61247 129 136 RPS3A 40S ribosomal protein S3a yes yes 2 4.7627E-05 178.6 By MS/MS By matching 8 0.632 1 3 1 4 1 42617000 42442000 175160 13959 1118 14772 35681;35682;35683;35684;35685 28514;28515;28516;28517 28516 4 545580 236370 TTDLLTDWEK LQMKIVQEDRAVESRTTDLLTDWEKTKPVT AVESRTTDLLTDWEKTKPVTGNLRPEEALQ R T T E K T 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 3 1 0 0 0 0 10 0 1220.5925 Q14204 Q14204 1254 1263 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 9.0904E-08 193.38 By MS/MS 2 0.816 1 1 1 3 1080300 1080300 0 13960 1433 14773 35686;35687;35688 28518;28519;28520 28518 3 285590 0 TTDVLTIK AKKKLIKLVGERYCKTTDVLTIKTDRCPLR VGERYCKTTDVLTIKTDRCPLRRQNYDYAV K T T I K T 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 3 0 0 1 0 0 8 0 889.51205 P82673 P82673 201 208 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2 0.0023228 140.09 By MS/MS 7 0 1 1 5705600 5705600 0 13961 1232 14774 35689 28521 28521 1 89568 0 TTEAKPESK LRSPESLKNMEKASKTTEAKPESKQEPVKT MEKASKTTEAKPESKQEPVKTEMGPPPSPA K T T S K Q 1 0 0 0 0 0 2 0 0 0 0 2 0 0 1 1 2 0 0 0 0 0 9 1 989.50294 O95071 O95071 591 599 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0003344 168.26 By MS/MS 2 0 1 1 52473 52473 0 13962 384 14775 35690 28522 28522 1 17749 0 TTEALKSEEK IDSKVADAATEVQHKTTEALKSEEKAMDIS EVQHKTTEALKSEEKAMDISAMPRGTPLYG K T T E K A 1 0 0 0 0 0 3 0 0 0 1 2 0 0 0 1 2 0 0 0 0 0 10 1 1134.5768 Q5SW79 Q5SW79 154 163 CEP170 Centrosomal protein of 170 kDa yes yes 2 5.5191E-14 232.72 By MS/MS 2 0 1 1 645640 645640 0 13963 1623 14776 35691 28523 28523 1 218380 0 TTEENQELVTR ALQITFTALEGKLRKTTEENQELVTRWMAE KLRKTTEENQELVTRWMAEKAQEANRLNAE K T T T R W 0 1 1 0 0 1 3 0 0 0 1 0 0 0 0 0 3 0 0 1 0 0 11 0 1318.6365 Q676U5 Q676U5 183 193 ATG16L1 Autophagy-related protein 16-1 yes yes 2 0.002293 132.25 By MS/MS 5 0 1 1 0 0 0 13964 1670 14777 35692 28524 28524 1 0 0 TTEMETIYDLGTK PATGTGSKVGKLTLKTTEMETIYDLGTKMI LKTTEMETIYDLGTKMIESLTKDKVQAGDV K T T T K M 0 0 0 1 0 0 2 1 0 1 1 1 1 0 0 0 4 0 1 0 0 0 13 0 1500.7018 Q9Y230 Q9Y230 165 177 RUVBL2 RuvB-like 2 yes yes 2 1.3482E-14 234.9 By MS/MS By matching 6.25 0.433 3 1 3 1 14294000 14255000 39090 13965 2810 14778;14779 35693;35694;35695;35696 28525;28526;28527 28527 1178 2 99596 40056 TTEVGSVSEVKK ______________________________ ______________________________ M T T K K D 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 2 2 0 0 3 0 0 12 1 1262.6718 O43491 O43491 2 13 EPB41L2 Band 4.1-like protein 2 yes yes 2 0.0024339 112.85 By MS/MS 3 0 1 1 476420 476420 0 13966 214 14780 35697 28528 28528 1 8717.1 0 TTFEDLIQR KITKKPIPDEHLILKTTFEDLIQRCLSSAT EHLILKTTFEDLIQRCLSSATDPQTKRKLD K T T Q R C 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1121.5717 O94979 O94979 1121 1129 SEC31A Protein transport protein Sec31A yes yes 2 8.516E-05 164.96 By MS/MS 3.5 0.5 1 1 2 1190300 1190300 0 13967 382 14781 35698;35699 28529;28530 28529 2 53686 0 TTFYTALGR LGINNQSNLTDMRCRTTFYTALGRLLMVDL TDMRCRTTFYTALGRLLMVDLGEDEDQYEQ R T T G R L 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 3 0 1 0 0 0 9 0 1028.5291 Q9UIA9 Q9UIA9 666 674 XPO7 Exportin-7 yes yes 2 0.0023983 116.25 By MS/MS 4 0 1 1 1035400 1035400 0 13968 2740 14782 35700 28531 28531 1 97435 0 TTGEVVSGVVSK EAALVYVENAHVAGKTTGEVVSGVVSKVFN AGKTTGEVVSGVVSKVFNQPKAKAKELGIE K T T S K V 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 2 2 0 0 4 0 0 12 0 1161.6241 Q14008 Q14008 85 96 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 6.225E-06 183.85 By MS/MS By matching 1.67 0.471 1 2 2 1 3990200 3934100 56116 13969 1417 14783 35701;35702;35703 28532;28533 28533 2 1320600 79359 TTGFGMIYDSLDYAK VIFVFGFRTHFGGGKTTGFGMIYDSLDYAK TTGFGMIYDSLDYAKKNEPKHRLARHGLYE K T T A K K 1 0 0 2 0 0 0 2 0 1 1 1 1 1 0 1 2 0 2 0 0 0 15 0 1680.7705 P62847 P62847 69 83 RPS24 40S ribosomal protein S24 yes yes 2 3.4588E-11 239.48 By MS/MS 9.29 0.452 5 2 7 8359400 8359400 0 13970 1175 14784;14785 35704;35705;35706;35707;35708;35709;35710 28534;28535;28536;28537;28538;28539;28540;28541;28542;28543;28544;28545 28534 680 12 205770 0 TTGFGMIYDSLDYAKK VIFVFGFRTHFGGGKTTGFGMIYDSLDYAK TGFGMIYDSLDYAKKNEPKHRLARHGLYEK K T T K K N 1 0 0 2 0 0 0 2 0 1 1 2 1 1 0 1 2 0 2 0 0 0 16 1 1808.8655 P62847 P62847 69 84 RPS24 40S ribosomal protein S24 yes yes 3 0.0025723 102.5 By MS/MS 9.5 0.5 1 1 2 550610 550610 0 13971 1175 14786 35711;35712 28546 28546 680 1 13364 0 TTGLVGLAVCNTPHER ______________________________ TGLVGLAVCNTPHERLRILYTKILDVLEEI K T T E R L 1 1 1 0 1 0 1 2 1 0 2 0 0 0 1 0 3 0 0 2 0 0 16 0 1723.8676 Q16718 Q16718 8 23 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2;3 2.8188E-07 218.02 By MS/MS 10 0 2 2 1953100 1953100 0 13972 1558 14787 35713;35714 28547;28548 28548 2 105260 0 TTHFVEGGDAGNR WPFKLSSPRGGMKKKTTHFVEGGDAGNRED KKTTHFVEGGDAGNREDQINRLIRRMN___ K T T N R E 1 1 1 1 0 0 1 3 1 0 0 0 0 1 0 0 2 0 0 1 0 0 13 0 1359.6167 P18124 P18124 224 236 RPL7 60S ribosomal protein L7 yes yes 2 0.005167 111.5 By MS/MS 8 0 1 1 318400 318400 0 13973 652 14788 35715 28549 28549 1 4019.8 0 TTHFVEGGDAGNREDQINR WPFKLSSPRGGMKKKTTHFVEGGDAGNRED VEGGDAGNREDQINRLIRRMN_________ K T T N R L 1 2 2 2 0 1 2 3 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 1 2114.973 P18124 P18124 224 242 RPL7 60S ribosomal protein L7 yes yes 3 0.0043417 87.388 By MS/MS 8 0 1 1 6715900 6715900 0 13974 652 14789 35716 28550 28550 1 84788 0 TTIAQQVK LEALELLGNFKDKERTTIAQQVKGKKVWIG NFKDKERTTIAQQVKGKKVWIGIKKLLMLI R T T V K G 1 0 0 0 0 2 0 0 0 1 0 1 0 0 0 0 2 0 0 1 0 0 8 0 887.50763 P46459 P46459 692 699 NSF Vesicle-fusing ATPase yes yes 2 0.010564 110.12 By MS/MS By matching 5 0 2 1 1 3962600 3924500 38156 13975 912 14790 35717;35718 28551 28551 1 39360 32043 TTIFSPEGR ______________________________ RRYDSRTTIFSPEGRLYQVEYAMEAIGHAG R T T G R L 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1006.5084 P25789 P25789 9 17 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.012151 96.668 By MS/MS 8 0 1 1 6839900 6839900 0 13976 727 14791 35719 28552 28552 1 86353 0 TTIIECLK FSPLTILVGPNGAGKTTIIECLKYICTGDF GPNGAGKTTIIECLKYICTGDFPPGTKGNT K T T L K Y 0 0 0 0 1 0 1 0 0 2 1 1 0 0 0 0 2 0 0 0 0 0 8 0 976.52632 Q92878 Q92878 43 50 RAD50 DNA repair protein RAD50 yes yes 2 0.036301 87.696 By MS/MS 3 0 1 1 780060 780060 0 13977 2074 14792 35720 28553 28553 1 14273 0 TTILQSTGK VTRDIVSRERVWRTRTTILQSTGKNFSKNI RVWRTRTTILQSTGKNFSKNIFAILQSVKA R T T G K N 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 1 3 0 0 0 0 0 9 0 947.52876 Q6P1J9 Q6P1J9 235 243 CDC73 Parafibromin yes yes 2 0.039649 98.582 By MS/MS 6 0 1 1 399620 399620 0 13978 1698 14793 35721 28554 28554 0 2747.1 0 TTISVAHLLAAR LAKVYQPKRSVLSPKTTISVAHLLAARQDL SPKTTISVAHLLAARQDLSKILRTSSGSIR K T T A R Q 3 1 0 0 0 0 0 0 1 1 2 0 0 0 0 1 2 0 0 1 0 0 12 0 1251.7299 Q8NCA5 Q8NCA5 261 272 FAM98A Protein FAM98A yes yes 2 0.01692 86.882 By MS/MS 6.5 0.5 1 1 2 1156800 1156800 0 13979 1950 14794 35722;35723 28555 28555 1 8877.1 0 TTIVICCSPSSYNESETK KMTRILQDSLGGNCRTTIVICCSPSSYNES VICCSPSSYNESETKSTLLFGQRAKTIKNT R T T T K S 0 0 1 0 2 0 2 0 0 2 0 1 0 0 1 4 3 0 1 1 0 0 18 0 2074.9187 P33176 P33176 296 313 KIF5B Kinesin-1 heavy chain yes yes 2 1.9977E-57 352.08 By MS/MS 4 0 1 1 1799800 1799800 0 13980 800 14795 35724 28556 28556 1 169380 0 TTLALFEFTDR ADMATFMVNSLYMMKTTLALFEFTDRRLEM YMMKTTLALFEFTDRRLEMLQFQIEAHLDT K T T D R R 1 1 0 1 0 0 1 0 0 0 2 0 0 2 0 0 3 0 0 0 0 0 11 0 1312.6663 Q9Y2V7 Q9Y2V7 510 520 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 2.6192E-06 180.09 By MS/MS 5 0 1 1 123890 123890 0 13981 2845 14796 35725 28557 28557 1 1242.6 0 TTLDDKLLGEK ______________________________ ______________________________ M T T E K L 0 0 0 2 0 0 1 1 0 0 3 2 0 0 0 0 2 0 0 0 0 0 11 1 1231.666 Q13371 Q13371 2 12 PDCL Phosducin-like protein yes yes 2 2.6991E-05 123.62 By MS/MS 7 0 1 1 1198500 1198500 0 13982 1375 14797 35726 28558 28558 0 18815 0 TTLLHMLKDDR KSGKLVFLGLDNAGKTTLLHMLKDDRLGQH NAGKTTLLHMLKDDRLGQHVPTLHPTSEEL K T T D R L 0 1 0 2 0 0 0 0 1 0 3 1 1 0 0 0 2 0 0 0 0 0 11 1 1341.7075 Q9NR31;Q9Y6B6 Q9NR31 39 49 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b yes no 3 0.0056729 93.442 By MS/MS 9 0 1 1 707210 707210 0 13983 2546 14798 35727 28559 28559 1 13918 0 TTLLPGLLK VHISNPKTAEFQVARTTLLPGLLKTIAANR EFQVARTTLLPGLLKTIAANRKMPLPLKLF R T T L K T 0 0 0 0 0 0 0 1 0 0 4 1 0 0 1 0 2 0 0 0 0 0 9 0 954.61137 Q9NSD9 Q9NSD9 452 460 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.053626 75.738 By MS/MS 5 0 1 1 750710 750710 0 13984 2569 14799 35728 28560 28560 1 7529.2 0 TTLQVDTLNAELAAER EEQSNMELLNDRFRKTTLQVDTLNAELAAE TLQVDTLNAELAAERSAAQKSDNARQQLER K T T E R S 3 1 1 1 0 1 2 0 0 0 3 0 0 0 0 0 3 0 0 1 0 0 16 0 1743.9003 P35580 P35580 1762 1777 MYH10 Myosin-10 yes yes 2 5.6892E-11 256.13 By MS/MS 2 0 1 1 323580 323580 0 13985 825 14800 35729 28561 28561 1 109450 0 TTLTAAITK PHVNVGTIGHVDHGKTTLTAAITKILAEGG HVDHGKTTLTAAITKILAEGGGAKFKKYEE K T T T K I 2 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 4 0 0 0 0 0 9 0 918.5386 P49411 P49411 71 79 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.00011522 159.28 By MS/MS 8 1.41 1 1 1 1 1 5 75876000 75876000 0 13986 949 14801 35730;35731;35732;35733;35734 28562;28563;28564 28563 3 1323300 0 TTLVIMER IVKNSAKDCYPAVQKTTLVIMERLQQVLQM CYPAVQKTTLVIMERLQQVLQMESHIQSTS K T T E R L 0 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 8 0 961.52665 Q14974 Q14974 550 557 KPNB1 Importin subunit beta-1 yes yes 2 0.018551 101.25 By MS/MS 4 0 1 1 2264000 2264000 0 13987 1462 14802 35735 28565 28565 1 213060 0 TTNFAGILSQGLR FKQLHNRRLLWHGSRTTNFAGILSQGLRIA SRTTNFAGILSQGLRIAPPEAPVTGYMFGK R T T L R I 1 1 1 0 0 1 0 2 0 1 2 0 0 1 0 1 2 0 0 0 0 0 13 0 1376.7412 P09874 P09874 866 878 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.0451E-05 196.02 By MS/MS 5.29 1.67 1 2 1 1 1 1 7 3346500 3346500 0 13988 543 14803 35736;35737;35738;35739;35740;35741;35742 28566;28567;28568;28569;28570 28568 5 203250 0 TTNFEGFLAK AKEIEVKLLLFAIQRTTNFEGFLAKRFSGC FAIQRTTNFEGFLAKRFSGCTLTDGTLKKL R T T A K R 1 0 1 0 0 0 1 1 0 0 1 1 0 2 0 0 2 0 0 0 0 0 10 0 1126.5659 Q5VIR6 Q5VIR6 351 360 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 9.9413E-05 153.97 By MS/MS 4.5 0.5 1 1 2 2917300 2917300 0 13989 1644 14804 35743;35744 28571 28571 1 241880 0 TTNSSHANGAAQAPR DIEQETFMLDEPLERTTNSSHANGAAQAPR TTNSSHANGAAQAPRSMQWAVRNTQHQRAA R T T P R S 4 1 2 0 0 1 0 1 1 0 0 0 0 0 1 2 2 0 0 0 0 0 15 0 1481.6971 O95071 O95071 1698 1712 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.032085 77.062 By MS/MS 1 0 1 1 22588 22588 0 13990 384 14805 35745 28572 28572 1 5442.9 0 TTPDVIFVFGFR VPKTEIREKLAKMYKTTPDVIFVFGFRTHF MYKTTPDVIFVFGFRTHFGGGKTTGFGMIY K T T F R T 0 1 0 1 0 0 0 1 0 1 0 0 0 3 1 0 2 0 0 2 0 0 12 0 1397.7343 P62847 P62847 50 61 RPS24 40S ribosomal protein S24 yes yes 2 6.3685E-05 163.16 By MS/MS 9.5 0.5 1 1 2 224660 224660 0 13991 1175 14806 35746;35747 28573;28574 28574 2 6667.4 0 TTPELEIVLQK PHKYCLSILTSHVKKTTPELEIVLQKVHEL HVKKTTPELEIVLQKVHELQGNAPSDPDAV K T T Q K V 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 0 2 0 0 1 0 0 11 0 1269.718 O95163 O95163 847 857 IKBKAP Elongator complex protein 1 yes yes 2 0.0096677 91.584 By MS/MS 2 0.816 1 1 1 3 472340 472340 0 13992 388 14807 35748;35749;35750 28575;28576 28575 2 83251 0 TTPGKENFR ______________________________ ______________________________ M T T F R L 0 1 1 0 0 0 1 1 0 0 0 1 0 1 1 0 2 0 0 0 0 0 9 1 1048.5302 P52294 P52294 2 10 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 2 0.052521 74.165 By MS/MS 6 0 1 1 2442800 2442800 0 13993 1014 14808 35751 28577 28577 1 16792 0 TTPNKTPPGADPK ______________________________ ______________________________ M T T P K Q 1 0 1 1 0 0 0 1 0 0 0 2 0 0 4 0 3 0 0 0 0 0 13 1 1322.683 Q9UM13 Q9UM13 2 14 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 2 0.00050636 134.75 By MS/MS 9 0 1 1 1483100 1483100 0 13994 2780 14809 35752 28578 28578 1 29187 0 TTPSVVAFTADGER EGKQAKVLENAEGARTTPSVVAFTADGERL RTTPSVVAFTADGERLVGMPAKRQAVTNPN R T T E R L 2 1 0 1 0 0 1 1 0 0 0 0 0 1 1 1 3 0 0 2 0 0 14 0 1449.71 P38646 P38646 86 99 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.0893E-06 205.07 By MS/MS By MS/MS 6 2.37 1 1 2 4 1 2 2 2 1 14 2 130750000 129910000 842990 13995 850 14810 35753;35754;35755;35756;35757;35758;35759;35760;35761;35762;35763;35764;35765;35766;35767;35768 28579;28580;28581;28582;28583;28584;28585;28586;28587;28588;28589;28590 28581 12 1595200 707930 TTPSYVAFTDTER QHGKVEIIANDQGNRTTPSYVAFTDTERLI NRTTPSYVAFTDTERLIGDAAKNQVAMNPT R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 P11142;P54652;P0DMV9;P0DMV8;P17066;P48741 P11142 37 49 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 2.108E-05 187.42 By MS/MS By MS/MS 5.35 2.29 2 2 2 5 3 3 1 1 1 13 7 420120000 416850000 3266500 13996 572;550;639 14811 35769;35770;35771;35772;35773;35774;35775;35776;35777;35778;35779;35780;35781;35782;35783;35784;35785;35786;35787;35788 28591;28592;28593;28594;28595;28596;28597;28598;28599;28600;28601;28602;28603 28591 13 4894200 2866400 TTQFSCTLGEK CDGKNLTIKTESTLKTTQFSCTLGEKFEET STLKTTQFSCTLGEKFEETTADGRKTQTVC K T T E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 1 3 0 0 0 0 0 11 0 1270.5864 Q01469 Q01469 62 72 FABP5 Fatty acid-binding protein, epidermal yes yes 2 0.01619 103.31 By MS/MS 10 0 1 1 64430 0 64430 13997 1267 14812 35789 28604 28604 1 0 82488 TTQLLFLK LGIPDAVSYIKKRYKTTQLLFLKAACVGQG YIKKRYKTTQLLFLKAACVGQGLVDQVEAS K T T L K A 0 0 0 0 0 1 0 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 8 0 962.58007 O94874 O94874 290 297 UFL1 E3 UFM1-protein ligase 1 yes yes 2 9.5572E-05 176.09 By MS/MS 4.5 0.5 1 1 2 3524800 3524800 0 13998 372 14813 35790;35791 28605;28606 28605 2 298930 0 TTQQIDLQGPGPWGFR ______________________________ TQQIDLQGPGPWGFRLVGGKDFEQPLAISR M T T F R L 0 1 0 1 0 3 0 3 0 1 1 0 0 1 2 0 2 1 0 0 0 0 16 0 1799.8955 O00151 O00151 2 17 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.00039675 141.58 By MS/MS 7 0 1 1 78054 78054 0 13999 84 14814 35792 28607;28608 28607 2 1225.3 0 TTSAGTGGMWR RQRKNASCGTRSAGRTTSAGTGGMWRFYTE SAGRTTSAGTGGMWRFYTEDSPGLKVGPVP R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.026151 81.972 By MS/MS 10 0 1 1 194140 194140 0 14000 1091 14815 35793 28609 28609 613 1 10464 0 TTSASSHLNK ______________________________ ______________________________ M T T N K G 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 3 2 0 0 0 0 0 10 0 1044.52 P15104 P15104 2 11 GLUL Glutamine synthetase yes yes 2 2.1893E-05 168.26 By MS/MS 7.5 0.5 1 1 2 3305600 3305600 0 14001 622 14816 35794;35795 28610 28610 1 51452 0 TTSGALFPSLVPGSR ______________________________ TTSGALFPSLVPGSRGASNKYLVEFRAGKM M T T S R G 1 1 0 0 0 0 0 2 0 0 2 0 0 1 2 3 2 0 0 1 0 0 15 0 1488.7936 Q16186 Q16186 2 16 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.020044 112.84 By MS/MS 8.33 1.25 1 1 1 3 1714300 1714300 0 14002 1543 14817 35796;35797;35798 28611;28612 28611 2 29526 0 TTSGDDACNLTSFR ERRNSSIVGRRSLERTTSGDDACNLTSFRP RTTSGDDACNLTSFRPATLTVTNFFKQEGD R T T F R P 1 1 1 2 1 0 0 1 0 0 1 0 0 1 0 2 3 0 0 0 0 0 14 0 1543.6573 Q96N67 Q96N67 450 463 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.00042585 140.91 By MS/MS 2 0 1 1 437330 437330 0 14003 2201 14818 35799 28613 28613 1 147920 0 TTSILCLAR NVPNIIIAGPPGTGKTTSILCLARALLGPA PPGTGKTTSILCLARALLGPALKDAMLELN K T T A R A 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 2 0 0 0 0 0 9 0 1033.559 P35250 P35250 83 91 RFC2 Replication factor C subunit 2 yes yes 2 0.0014431 135.77 By MS/MS 7.5 0.5 1 1 2 1862000 1862000 0 14004 817 14819 35800;35801 28614 28614 1 28406 0 TTSIRQFTSSSSIK ______________________________ MTTSIRQFTSSSSIKGSSGLGGGSSRTSCR M T T I K G 0 1 0 0 0 1 0 0 0 2 0 1 0 1 0 5 3 0 0 0 0 0 14 1 1541.8049 CON__Q04695;Q04695 CON__Q04695 2 15 KRT17 Keratin, type I cytoskeletal 17 yes no 2 0.00021526 138.89 By MS/MS 5.25 3.83 1 1 1 1 4 378260 0 378260 + 14005 57 14820 35802;35803;35804;35805 28615;28616;28617;28618 28618 4 0 498120 TTSIRQFTSSSSIKGSSGLGGGSSR ______________________________ SSIKGSSGLGGGSSRTSCRLSGGLGAGSCR M T T S R T 0 2 0 0 0 1 0 5 0 2 1 1 0 1 0 9 3 0 0 0 0 0 25 2 2444.2255 CON__Q04695;Q04695 CON__Q04695 2 26 KRT17 Keratin, type I cytoskeletal 17 yes no 3 0.003065 65.023 By MS/MS 10 0 1 1 186100 0 186100 + 14006 57 14821 35806 28619 28619 1 0 238260 TTSNNTYEVEK NLRAVMATHGVKGTRTTSNNTYEVEKTLGI KGTRTTSNNTYEVEKTLGIEAARTTIINEI R T T E K T 0 0 2 0 0 0 2 0 0 0 0 1 0 0 0 1 3 0 1 1 0 0 11 0 1284.5834 O14802 O14802 1246 1256 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 5.154E-20 270.36 By MS/MS 2.5 0.5 1 1 2 635350 635350 0 14007 139 14822 35807;35808 28620 28620 1 22087 0 TTTAAAVASTGPSSR PASRSGSKSTQTVAKTTTAAAVASTGPSSR TTTAAAVASTGPSSRSPSTLLPKKPTAIKT K T T S R S 4 1 0 0 0 0 0 1 0 0 0 0 0 0 1 3 4 0 0 1 0 0 15 0 1376.6896 P27816 P27816 810 824 MAP4 Microtubule-associated protein 4 yes yes 2 0.00060086 157.03 By MS/MS 2 0.816 1 1 1 3 1288500 1288500 0 14008 746 14823 35809;35810;35811 28621 28621 1 306770 0 TTTGSYIANR AVQFDGGVVLGADSRTTTGSYIANRVTDKL GADSRTTTGSYIANRVTDKLTPIHDRIFCC R T T N R V 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 3 0 1 0 0 0 10 0 1082.5356 P28072 P28072 54 63 PSMB6 Proteasome subunit beta type-6 yes yes 2 1.1497E-10 214.96 By MS/MS By MS/MS 7.5 2.69 1 1 1 1 3 1 9522900 9385800 137150 14009 750 14824 35812;35813;35814;35815 28622;28623;28624;28625 28624 4 187450 17457 TTTLSGTAPAAGVVPSR DLSRPKSTSTSSMKKTTTLSGTAPAAGVVP TLSGTAPAAGVVPSRVKATPMPSRPSTTPF K T T S R V 3 1 0 0 0 0 0 2 0 0 1 0 0 0 2 2 4 0 0 2 0 0 17 0 1584.8471 P27816 P27816 872 888 MAP4 Microtubule-associated protein 4 yes yes 2 7.8795E-06 202.32 By MS/MS 2.5 0.5 1 1 2 1465100 1465100 0 14010 746 14825 35816;35817 28626 28626 1 365790 0 TTTSSGGLTISSLLK LREYAWKILSGNLPKTTTSSGGLTISSLLK TTTSSGGLTISSLLKEKEGSEVAKFTLEEL K T T L K E 0 0 0 0 0 0 0 2 0 1 3 1 0 0 0 4 4 0 0 0 0 0 15 0 1464.8035 Q5VIR6 Q5VIR6 520 534 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.00031466 171.67 By MS/MS 4.5 0.5 1 1 2 1154800 1154800 0 14011 1644 14826 35818;35819 28627 28627 1 99419 0 TTTTLIEPIR GGSGPPEKKLSREEKTTTTLIEPIRLGGIS SREEKTTTTLIEPIRLGGISSTEEMDLKVL K T T I R L 0 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 4 0 0 0 0 0 10 0 1143.6499 O75150 O75150 28 37 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.0050842 105.4 By MS/MS 3 0 1 1 473070 473070 0 14012 297 14827 35820 28628 28628 1 8655.9 0 TTVVAQLK NLYSDDIPHALREKRTTVVAQLKQLQAETE HALREKRTTVVAQLKQLQAETEPIVKMFED R T T L K Q 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 8 0 858.51747 P60228 P60228 75 82 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0049312 125.81 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 54764000 54400000 364230 14013 1090 14828 35821;35822;35823;35824;35825;35826 28629;28630;28631;28632;28633 28629 5 461270 373240 TTVVAQLKQLQAETEPIVK NLYSDDIPHALREKRTTVVAQLKQLQAETE AQLKQLQAETEPIVKMFEDPETTRQMQSTR R T T V K M 2 0 0 0 0 3 2 0 0 1 2 2 0 0 1 0 3 0 0 3 0 0 19 1 2095.1889 P60228 P60228 75 93 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 2.5256E-05 183.88 By MS/MS 6 0 1 1 1332600 1332600 0 14014 1090 14829 35827 28634;28635 28634 2 9160.9 0 TTYLEFIQQNEER ______________________________ ______________________________ M T T E R D 0 1 1 0 0 2 3 0 0 1 1 0 0 1 0 0 2 0 1 0 0 0 13 0 1669.7948 Q15436 Q15436 2 14 SEC23A Protein transport protein Sec23A yes yes 2 1.9203E-05 191.29 By MS/MS 5 0 1 1 88921 88921 0 14015 1513 14830 35828 28636;28637 28637 2 891.83 0 TTYLVLDEADR RLIDFLECGKTNLRRTTYLVLDEADRMLDM NLRRTTYLVLDEADRMLDMGFEPQIRKIVD R T T D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 11 0 1294.6405 P17844 P17844 242 252 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.00016597 146.11 By MS/MS 5 0 1 1 1628800 1628800 0 14016 646 14831 35829 28638 28638 1 16336 0 TVAAELAIFR TDCNVLLGAPTGSGKTVAAELAIFRVFNKY TGSGKTVAAELAIFRVFNKYPTSKAVYIAP K T V F R V 3 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1089.6182 Q8N3C0 Q8N3C0 1356 1365 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.00032001 138.98 By MS/MS 2 0 1 1 76993 76993 0 14017 1911 14832 35830 28639 28639 1 26042 0 TVAATNMNETSSR YNDIQDLMDSGNKARTVAATNMNETSSRSH ARTVAATNMNETSSRSHAVFNIIFTQKRHD R T V S R S 2 1 2 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 1 0 0 13 0 1380.6303 Q12756;O43896 Q12756 204 216 KIF1A;KIF1C Kinesin-like protein KIF1A;Kinesin-like protein KIF1C no no 2 0.00070658 131.42 By MS/MS 2 0 1 1 310220 310220 0 14018 1324;244 14833 35831 28640 28640 1 104930 0 TVAGGGLETISNLK LPLFQEAEDKNRLLRTVAGGGLETISNLKA RTVAGGGLETISNLKAKWDKFELMMESHQL R T V L K A 1 0 1 0 0 0 1 3 0 1 2 1 0 0 0 1 2 0 0 1 0 0 14 0 1358.7405 Q8NCM8 Q8NCM8 999 1012 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.003806 107.34 By MS/MS 2 0.816 1 1 1 3 696080 696080 0 14019 1952 14834 35832;35833;35834 28641;28642 28642 2 179890 0 TVALDGTLFQK EDARRIAFGGHQRHKTVALDGTLFQKSGVI QRHKTVALDGTLFQKSGVISGGASDLKAKA K T V Q K S 1 0 0 1 0 1 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 11 0 1191.6499 Q14683 Q14683 638 648 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 2.3233E-18 250.06 By MS/MS 2.5 0.5 1 1 2 1025700 1025700 0 14020 1451 14835 35835;35836 28643 28643 1 41394 0 TVALWDLR NPYSEFILATGSADKTVALWDLRNLKLKLH ATGSADKTVALWDLRNLKLKLHSFESHKDE K T V L R N 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 8 0 972.53927 Q09028;Q16576 Q09028 297 304 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.0024824 138.54 By MS/MS 7 0.816 1 1 1 3 4902000 4902000 0 14021 1318;1553 14836 35837;35838;35839 28644;28645 28644 2 37268 0 TVAQSQQLETNSQR DAGNSDRVVIQEMLKTVAQSQQLETNSQRD KTVAQSQQLETNSQRDFKVVLLTEVDKLTK K T V Q R D 1 1 1 0 0 4 1 0 0 0 1 0 0 0 0 2 2 0 0 1 0 0 14 0 1588.7805 P40938 P40938 114 127 RFC3 Replication factor C subunit 3 yes yes 2 1.6275E-43 322.7 By MS/MS 7 0 1 1 3279300 3279300 0 14022 864 14837 35840 28646 28646 1 51480 0 TVATFILQK PLCLRIMESGSELSKTVATFILQKILLDDT GSELSKTVATFILQKILLDDTGLAYICQTY K T V Q K I 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 1 0 0 9 0 1019.6015 Q92600 Q92600 180 188 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 0.0005505 145.16 By MS/MS 8 0 1 1 1829000 1829000 0 14023 2060 14838 35841 28647 28647 1 23091 0 TVATLSILGTR ALRTLVGICSEHQSRTVATLSILGTRRVVS HQSRTVATLSILGTRRVVSILGVESQAVSL R T V T R R 1 1 0 0 0 0 0 1 0 1 2 0 0 0 0 1 3 0 0 1 0 0 11 0 1130.6659 Q9H3U1 Q9H3U1 230 240 UNC45A Protein unc-45 homolog A yes yes 2 6.7273E-07 194.94 By MS/MS 5.33 1.25 1 1 1 3 2661700 2661700 0 14024 2442 14839 35842;35843;35844 28648;28649 28648 2 197790 0 TVATPLNQVANPNSAIFGGAR EEERAQRPRLQLKPRTVATPLNQVANPNSA NQVANPNSAIFGGARPREEVVQKEQE____ R T V A R P 4 1 3 0 0 1 0 2 0 1 1 0 0 1 2 1 2 0 0 2 0 0 21 0 2097.0967 Q15056 Q15056 217 237 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 7.387E-60 350.92 By MS/MS 8 0 1 1 2090400 2090400 0 14025 1485 14840 35845 28650 28650 1 26391 0 TVATPLNQVANPNSAIFGGARPR EEERAQRPRLQLKPRTVATPLNQVANPNSA VANPNSAIFGGARPREEVVQKEQE______ R T V P R E 4 2 3 0 0 1 0 2 0 1 1 0 0 1 3 1 2 0 0 2 0 0 23 1 2350.2506 Q15056 Q15056 217 239 EIF4H Eukaryotic translation initiation factor 4H yes yes 3 0.049085 50.232 By MS/MS 8 0 1 1 1482900 1482900 0 14026 1485 14841 35846 28651 28651 1 18721 0 TVDFTQDSNYLLTGGQDK SGDELMTLAHKHIVKTVDFTQDSNYLLTGG FTQDSNYLLTGGQDKLLRIYDLNKPEAEPK K T V D K L 0 0 1 3 0 2 0 2 0 0 2 1 0 1 0 1 3 0 1 1 0 0 18 0 2000.9327 Q9Y3F4 Q9Y3F4 105 122 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 1.5124E-11 242.41 By MS/MS 7.5 0.5 1 1 2 5553700 5553700 0 14027 2877 14842 35847;35848 28652 28652 1 86338 0 TVDLKPDWGK AKKGDYQKAYEDGCKTVDLKPDWGKGYSRK EDGCKTVDLKPDWGKGYSRKAAALEFLNRF K T V G K G 0 0 0 2 0 0 0 1 0 0 1 2 0 0 1 0 1 1 0 1 0 0 10 1 1157.6081 P31948 P31948 64 73 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.04429 96.665 By MS/MS 5 0 1 1 1084100 1084100 0 14028 795 14843 35849 28653 28653 1 10873 0 TVDLSSHLAK ASSEAPPLINEDVKRTVDLSSHLAKVTAEV EDVKRTVDLSSHLAKVTAEVVLAHLGGGST R T V A K V 1 0 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 1 0 0 10 0 1069.5768 P04843 P04843 39 48 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.013173 89.029 By MS/MS 5 0 1 1 2966100 2966100 0 14029 478 14844 35850 28654 28654 1 29749 0 TVDNFVALATGEK VGRVIFGLFGKTVPKTVDNFVALATGEKGF PKTVDNFVALATGEKGFGYKNSKFHRVIKD K T V E K G 2 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1363.6983 P23284 P23284 72 84 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 6.2988E-12 242.97 By MS/MS 9 0.816 1 1 1 3 5892800 5892800 0 14030 702 14845 35851;35852;35853 28655;28656 28655 2 120340 0 TVEACPVVR AFQLQDGCEYVFIWRTVEACPVVRVEGDNC YVFIWRTVEACPVVRVEGDNCEVKDPRHGN R T V V R V 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 3 0 0 9 0 1029.5277 P11717 P11717 1213 1221 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0060994 107.29 By MS/MS 1.5 0.5 1 1 2 649050 649050 0 14031 583 14846 35854;35855 28657 28657 1 201150 0 TVEALYK RQIPYTMMKFACFERTVEALYKFVVPKPRS MKFACFERTVEALYKFVVPKPRSECSKPEQ R T V Y K F 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 7 0 822.44872 Q00325 Q00325 241 247 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.018167 114.19 By MS/MS 6 3.56 1 1 1 3 5771900 5771900 0 14032 1259 14847 35856;35857;35858 28658;28659 28658 2 634440 0 TVEDVFLR LHTGNLDGEDHAAERTVEDVFLRKFMWGTF EDHAAERTVEDVFLRKFMWGTFPGCLADQL R T V L R K 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 977.5182 Q96EL2 Q96EL2 86 93 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 0.0020096 143.12 By MS/MS By matching 10 0 2 1 1 6510400 6461700 48703 14033 2145 14848 35859;35860 28660 28660 1 348260 62354 TVEDVFLRK LHTGNLDGEDHAAERTVEDVFLRKFMWGTF DHAAERTVEDVFLRKFMWGTFPGCLADQLV R T V R K F 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 9 1 1105.6132 Q96EL2 Q96EL2 86 94 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2;3 0.0051854 127.46 By MS/MS By matching 10 0 3 2 1 5818600 5781000 37545 14034 2145 14849 35861;35862;35863 28661;28662 28661 2 311580 48068 TVEELFVNCK GIGMHHAGLHERDRKTVEELFVNCKVQVLI ERDRKTVEELFVNCKVQVLIATSTLAWGVN K T V C K V 0 0 1 0 1 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1237.6013 Q8N3C0 Q8N3C0 1630 1639 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.011362 91.265 By MS/MS 1 0 1 1 92316 92316 0 14035 1911 14850 35864 28663 28663 1 22245 0 TVELLSGVVDQTK TRYLNIFGESQPNPKTVELLSGVVDQTKDG PKTVELLSGVVDQTKDGLISFQEFVAFESV K T V T K D 0 0 0 1 0 1 1 1 0 0 2 1 0 0 0 1 2 0 0 3 0 0 13 0 1387.7559 Q9UJS0 Q9UJS0 57 69 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.4263E-13 247.96 By MS/MS 3.6 1.85 1 1 1 1 1 5 31010000 31010000 0 14036 2748 14851 35865;35866;35867;35868;35869 28664;28665;28666 28666 3 413410 0 TVELSIPADPANLDSEAK RLGGIPVGVVAVETRTVELSIPADPANLDS LSIPADPANLDSEAKIIQQAGQVWFPDSAF R T V A K I 3 0 1 2 0 0 2 0 0 1 2 1 0 0 2 2 1 0 0 1 0 0 18 0 1868.9367 Q13085 Q13085 1992 2009 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.015093 82.543 By MS/MS 1 0 1 1 122690 122690 0 14037 1351 14852 35870 28667 28667 1 29565 0 TVENFVALATGEK VGRIVIGLFGKVVPKTVENFVALATGEKGY PKTVENFVALATGEKGYGYKGSKFHRVIKD K T V E K G 2 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1377.714 P45877 P45877 66 78 PPIC Peptidyl-prolyl cis-trans isomerase C yes yes 2 2.584E-11 226.33 By MS/MS 9 0 1 1 233430 233430 0 14038 902 14853 35871 28668 28668 1 4593.8 0 TVENIKDPLFR NWLHLIPQTLSHLKRTVENIKDPLFRFFER HLKRTVENIKDPLFRFFEREVKMGAKLLQD R T V F R F 0 1 1 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 0 1 0 0 11 1 1330.7245 Q14204 Q14204 4401 4411 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0013612 136.52 By MS/MS 2.29 1.03 2 2 2 1 7 4688700 4688700 0 14039 1433 14854 35872;35873;35874;35875;35876;35877;35878 28669;28670;28671;28672;28673 28671 5 1022100 0 TVEQTATTTNK TFADKEKKKEKKKAKTVEQTATTTNKKPGQ KKAKTVEQTATTTNKKPGQGTPNSANTQGN K T V N K K 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 5 0 0 1 0 0 11 0 1192.5935 P08579 P08579 112 122 SNRPB2 U2 small nuclear ribonucleoprotein B yes yes 2 5.9717E-13 225.93 By MS/MS 8 0 1 1 1110700 1110700 0 14040 526 14855 35879 28674 28674 1 14023 0 TVESEAASYLDQISR NFGVSIQEETVAELRTVESEAASYLDQISR TVESEAASYLDQISRYYITRAKLVSKIAKY R T V S R Y 2 1 0 1 0 1 2 0 0 1 1 0 0 0 0 3 1 0 1 1 0 0 15 0 1667.8002 P61289 P61289 167 181 PSME3 Proteasome activator complex subunit 3 yes yes 2 5.6677E-17 265.75 By MS/MS 8 0 1 1 332040 332040 0 14041 1120 14856 35880 28675 28675 1 4191.9 0 TVETLLLR DSANKFEENTYCFGRTVETLLLRFGKTIME NTYCFGRTVETLLLRFGKTIMEEQLVLKRV R T V L R F 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 8 0 943.57023 Q9H845 Q9H845 511 518 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 0.0049312 125.81 By MS/MS 6 0 1 1 2565200 2565200 0 14042 2471 14857 35881 28676 28676 1 17634 0 TVEVAEGEAVR KNRKKLSEKPKPNGRTVEVAEGEAVRTPQS PNGRTVEVAEGEAVRTPQSVTAKQPPEIDK R T V V R T 2 1 0 0 0 0 3 1 0 0 0 0 0 0 0 0 1 0 0 3 0 0 11 0 1158.5881 Q86UE4 Q86UE4 132 142 MTDH Protein LYRIC yes yes 2 0.00021066 159.34 By MS/MS 5 0 1 1 1256800 1256800 0 14043 1819 14858 35882 28677 28677 1 12605 0 TVFAEHISDECK IVGYVETPRGLRTFKTVFAEHISDECKRRF TFKTVFAEHISDECKRRFYKNWHKSKKKAF K T V C K R 1 0 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 0 12 0 1434.6449 P39023 P39023 104 115 RPL3 60S ribosomal protein L3 yes yes 2 0.000344 141.1 By MS/MS 7 0 1 1 1094100 1094100 0 14044 854 14859 35883 28678 28678 1 17176 0 TVFDEAIR VKYLECSALTQRGLKTVFDEAIRAVLCPPP LTQRGLKTVFDEAIRAVLCPPPVKKRKRKC K T V I R A 1 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 8 0 949.4869 P63000;P15153;P60763 P63000 167 174 RAC1;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 2 0.036301 87.696 By MS/MS 9.5 0.5 1 1 2 3231600 3231600 0 14045 1192;1096 14860 35884;35885 28679 28679 1 68395 0 TVFSPTLPAAR KSLTSWTNDQGARRKTVFSPTLPAARSSLG ARRKTVFSPTLPAARSSLGSLQTPEAVTTR K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 Q7Z2W4 Q7Z2W4 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.045638 72.243 By MS/MS 4 0 1 1 6066100 6066100 0 14046 1778 14861 35886 28680 28680 1 570860 0 TVFVSERELDWAK FLGRVKHFLNITDPRTVFVSERELDWAKVM PRTVFVSERELDWAKVMVEKSRMGVVPPGT R T V A K V 1 1 0 1 0 0 2 0 0 0 1 1 0 1 0 1 1 1 0 2 0 0 13 1 1578.8042 Q96NB2 Q96NB2 35 47 SFXN2 Sideroflexin-2 yes yes 2 0.0413 93.623 By MS/MS 8 0 1 1 1026300 1026300 0 14047 2202 14862 35887 28681 28681 1 12957 0 TVGAALDILCPSGPIK TPKFAYGKVTLEKLKTVGAALDILCPSGPI VGAALDILCPSGPIKSLYPLTFIQVKQHYG K T V I K S 2 0 0 1 1 0 0 2 0 2 2 1 0 0 2 1 1 0 0 1 0 0 16 0 1610.8702 P16278 P16278 384 399 GLB1 Beta-galactosidase yes yes 2 0.024334 79.744 By MS/MS 4.5 0.5 1 1 2 323630 323630 0 14048 630 14863 35888;35889 28682 28682 1 13923 0 TVGALQVLGTEAQSSLLK LLAALECYNTFIGERTVGALQVLGTEAQSS ALQVLGTEAQSSLLKAVAFFLESIAMHDII R T V L K A 2 0 0 0 0 2 1 2 0 0 4 1 0 0 0 2 2 0 0 2 0 0 18 0 1814.0149 P78527 P78527 1275 1292 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.8552E-33 297.45 By MS/MS 1.5 0.5 1 1 2 455340 455340 0 14049 1225 14864 35890;35891 28683;28684;28685 28685 3 142880 0 TVGATALPR LVRLNSKWDLRRLCKTVGATALPRLTPPVL LRRLCKTVGATALPRLTPPVLEEMGHCDSV K T V P R L 2 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 2 0 0 1 0 0 9 0 884.50797 P50990 P50990 327 335 CCT8 T-complex protein 1 subunit theta yes yes 2 7.8064E-05 166.3 By MS/MS 6.88 1.9 1 1 2 1 1 1 1 8 92565000 92565000 0 14050 984 14865 35892;35893;35894;35895;35896;35897;35898;35899 28686;28687;28688;28689 28687 4 734540 0 TVGQLYKEQLAK TALPGAFKTRKGMFRTVGQLYKEQLAKLMA MFRTVGQLYKEQLAKLMATLRNTNPNFVRC R T V A K L 1 0 0 0 0 2 1 1 0 0 2 2 0 0 0 0 1 0 1 1 0 0 12 1 1376.7664 P35579 P35579 645 656 MYH9 Myosin-9 yes yes 2 0.0011091 136.81 By MS/MS 2 0 1 1 626090 626090 0 14051 824 14866 35900 28690 28690 1 211770 0 TVGTPIASVPGSTNTGTVPGSEK SASQQFLSSVIQNLRTVGTPIASVPGSTNT VPGSTNTGTVPGSEKDSDSMETEEKTSSAF R T V E K D 1 0 1 0 0 0 1 4 0 1 0 1 0 0 3 3 5 0 0 3 0 0 23 0 2156.0961 Q99460 Q99460 270 292 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 2.9834E-08 197.51 By MS/MS By matching 4 0 2 1 1 2306300 2240500 65854 14052 2246 14867 35901;35902 28691 28691 1 210840 140310 TVGTPIASVPGSTNTGTVPGSEKDSDSMETEEK SASQQFLSSVIQNLRTVGTPIASVPGSTNT PGSEKDSDSMETEEKTSSAFVGKTPEASPE R T V E K T 1 0 1 2 0 0 4 4 0 1 0 2 1 0 3 5 6 0 0 3 0 0 33 1 3307.5249 Q99460 Q99460 270 302 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 2.3614E-05 71.289 By MS/MS 4 0 1 1 1642900 1642900 0 14053 2246 14868 35903 28692 28692 1 154610 0 TVGVEPAADGK KARNSFRYNGLIHRKTVGVEPAADGKGVVV IHRKTVGVEPAADGKGVVVVIKRRSGQRKP K T V G K G 2 0 0 1 0 0 1 2 0 0 0 1 0 0 1 0 1 0 0 2 0 0 11 0 1042.5295 P46779 P46779 48 58 RPL28 60S ribosomal protein L28 yes yes 2 0.00080027 125.57 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 3397300 3298600 98659 14054 917 14869 35904;35905;35906 28693;28694;28695 28694 3 85747 224970 TVGVNNPVFLLDEVDK TYVGSMPGRIINGLKTVGVNNPVFLLDEVD VGVNNPVFLLDEVDKLGKSLQGDPAAALLE K T V D K L 0 0 2 2 0 0 1 1 0 0 2 1 0 1 1 0 1 0 0 4 0 0 16 0 1757.92 Q86WA8 Q86WA8 431 446 LONP2 Lon protease homolog 2, peroxisomal yes yes 2 0.00042078 167.03 By MS/MS 4 0 1 1 93225 93225 0 14055 1838 14870 35907 28696;28697 28696 2 8773.1 0 TVHCQPAIFVASLAAVEK LLELSLHGPQETLDRTVHCQPAIFVASLAA CQPAIFVASLAAVEKLHHLQPSVIENCVAA R T V E K L 4 0 0 0 1 1 1 0 1 1 1 1 0 1 1 1 1 0 0 3 0 0 18 0 1940.019 Q8IVS2 Q8IVS2 117 134 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 3 0.026085 69.188 By MS/MS 7 0 1 1 92261 92261 0 14056 1863 14871 35908 28698 28698 1 1448.3 0 TVIDSQTHYR TQMESACVTIHEALKTVIDSQTHYRLREAQ HEALKTVIDSQTHYRLREAQDRARAEDLNS K T V Y R L 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 1 2 0 1 1 0 0 10 0 1218.5993 Q9Y3Q3 Q9Y3Q3 153 162 TMED3 Transmembrane emp24 domain-containing protein 3 yes yes 2 0.00052125 132.88 By MS/MS 9 0 1 1 299380 299380 0 14057 2882 14872 35909 28699 28699 1 5891.9 0 TVIESSPESPVTITEPYR ASGSNNAVIYVHNLKTVIESSPESPVTITE ESSPESPVTITEPYRTLSGHTAKITSVAWS K T V Y R T 0 1 0 0 0 0 3 0 0 2 0 0 0 0 3 3 3 0 1 2 0 0 18 0 2004.0052 Q8TEQ6 Q8TEQ6 616 633 GEMIN5 Gem-associated protein 5 yes yes 2 2.4288E-07 203.87 By MS/MS 3 0 1 1 297750 297750 0 14058 2002 14873 35910 28700 28700 1 5447.9 0 TVIGSVLLR LKEGSTAQLIINTEKTVIGSVLLRELKPVL IINTEKTVIGSVLLRELKPVLSQG______ K T V L R E 0 1 0 0 0 0 0 1 0 1 2 0 0 0 0 1 1 0 0 2 0 0 9 0 956.60187 O00203 O00203 1077 1085 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.040129 80.219 By MS/MS 3.5 0.5 1 1 2 611010 611010 0 14059 90 14874 35911;35912 28701 28701 1 51700 0 TVIIEQSWGSPK LLADAVAVTMGPKGRTVIIEQSWGSPKVTK KGRTVIIEQSWGSPKVTKDGVTVAKSIDLK R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 1.5724E-12 233.84 By MS/MS By matching 7.11 1.52 1 3 2 1 1 1 8 1 86411000 86294000 117680 14060 569 14875 35913;35914;35915;35916;35917;35918;35919;35920;35921 28702;28703;28704;28705;28706;28707 28703 6 653590 120590 TVIKEGEEQLQTQHQK RNLTYSAPLYVDITKTVIKEGEEQLQTQHQ VIKEGEEQLQTQHQKTFIGKIPIMLRSTYC K T V Q K T 0 0 0 0 0 4 3 1 1 1 1 2 0 0 0 0 2 0 0 1 0 0 16 1 1894.9749 P30876 P30876 131 146 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.00036708 159.41 By MS/MS 3.5 0.5 1 1 2 873800 873800 0 14061 781 14876 35922;35923 28708 28708 1 28018 0 TVIKKDEQEHEFYK NRYIVLAKDFEKAYKTVIKKDEQEHEFYK_ KTVIKKDEQEHEFYK_______________ K T V Y K - 0 0 0 1 0 1 3 0 1 1 0 3 0 1 0 0 1 0 1 1 0 0 14 2 1792.8996 P43686 P43686 405 418 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.00032092 164.64 By MS/MS 8 2 1 1 2 4704500 4704500 0 14062 900 14877 35924;35925 28709;28710 28709 2 38627 0 TVIQEALALDR WIREPWEELFSIGLRTVIQEALALDR____ IGLRTVIQEALALDR_______________ R T V D R - 2 1 0 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1227.6823 Q8N1F8 Q8N1F8 1078 1088 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 3.359E-07 199.19 By MS/MS 2.67 1.25 1 1 1 3 353670 353670 0 14063 1904 14878 35926;35927;35928 28711;28712;28713 28712 3 6471.1 0 TVISPDPNLR FRGNLSGKRVDFSGRTVISPDPNLRIDEVA DFSGRTVISPDPNLRIDEVAVPVHVAKILT R T V L R I 0 1 1 1 0 0 0 0 0 1 1 0 0 0 2 1 1 0 0 1 0 0 10 0 1110.6033 O14802 O14802 367 376 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.032219 78.264 By MS/MS 3 0 1 1 1036300 1036300 0 14064 139 14879 35929 28714 28714 1 18961 0 TVITPDPNLSIDQVGVPR VRGNLMGKRVDFSARTVITPDPNLSIDQVG TPDPNLSIDQVGVPRSIAANMTFAEIVTPF R T V P R S 0 1 1 2 0 1 0 1 0 2 1 0 0 0 3 1 2 0 0 3 0 0 18 0 1920.0316 P24928 P24928 365 382 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.00016985 175.01 By MS/MS 2 0 1 1 207480 207480 0 14065 717 14880 35930 28715 28715 1 70177 0 TVIVHGFTLGEK SLLTSVAARKRAPYKTVIVHGFTLGEKGEK PYKTVIVHGFTLGEKGEKMSKSLGNVIHPD K T V E K G 0 0 0 0 0 0 1 2 1 1 1 1 0 1 0 0 2 0 0 2 0 0 12 0 1299.7187 Q9NSE4 Q9NSE4 650 661 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0057772 101.3 By MS/MS 4.5 0.5 1 1 2 2345500 2345500 0 14066 2570 14881 35931;35932 28716 28716 1 182830 0 TVIVTGANTGIGK VTGGACPSKATIPGKTVIVTGANTGIGKQT GKTVIVTGANTGIGKQTALELARRGGNIIL K T V G K Q 1 0 1 0 0 0 0 3 0 2 0 1 0 0 0 0 3 0 0 2 0 0 13 0 1229.698 Q8NBN7 Q8NBN7 40 52 RDH13 Retinol dehydrogenase 13 yes yes 2 0.007687 95.618 By MS/MS 7.5 0.5 1 1 2 1606500 1606500 0 14067 1941 14882 35933;35934 28717 28717 1 22508 0 TVKDQDITR LTRLRIDYERVSQERTVKDQDITRFQNSLK RVSQERTVKDQDITRFQNSLKELQLQKQKV R T V T R F 0 1 0 2 0 1 0 0 0 1 0 1 0 0 0 0 2 0 0 1 0 0 9 1 1074.5669 P15924 P15924 1550 1558 DSP Desmoplakin yes yes 3 0.019659 102.07 By MS/MS 3 0 1 1 236510 0 236510 14068 628 14883 35935 28718 28718 1 0 30104 TVKHPTLLQDPDLR FVEKRRAALERYLQRTVKHPTLLQDPDLRQ RTVKHPTLLQDPDLRQFLESSELPRAVNTQ R T V L R Q 0 1 0 2 0 1 0 0 1 0 3 1 0 0 2 0 2 0 0 1 0 0 14 1 1631.8995 O60749 O60749 246 259 SNX2 Sorting nexin-2 yes yes 3 0.019701 77.633 By MS/MS 5 0 1 1 1100000 1100000 0 14069 274 14884 35936 28719 28719 1 11033 0 TVKQPVYVVDVSK MHRFGPIPLGSLGWKTVKQPVYVVDVSKGI WKTVKQPVYVVDVSKGIVNAVKDPDANGKS K T V S K G 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 1 1 0 1 5 0 0 13 1 1460.8239 Q16795 Q16795 235 247 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.014091 108.68 By MS/MS 7 0 1 1 1488600 1488600 0 14070 1559 14885 35937 28720 28720 1 23368 0 TVLAAAYGEK LWILLILLFEQYVTKTVLAAAYGEKDAILE QYVTKTVLAAAYGEKDAILEADTEFWFSVC K T V E K D 3 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1021.5444 Q9H583 Q9H583 1427 1436 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.046781 73.885 By MS/MS 2 0 1 1 395660 395660 0 14071 2451 14886 35938 28721 28721 1 133830 0 TVLASDTHQR EGVRVQCLWCLSDGKTVLASDTHQRIRGYN LSDGKTVLASDTHQRIRGYNFEDLTDRNIV K T V Q R I 1 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1126.5731 Q9H7D7 Q9H7D7 499 508 WDR26 WD repeat-containing protein 26 yes yes 2 0.00025045 143.7 By MS/MS 4.5 0.5 1 1 2 1090500 1090500 0 14072 2461 14887 35939;35940 28722 28722 1 27866 0 TVLDPVTGDLSDTR FLYLNIGLQNGVLLRTVLDPVTGDLSDTRT RTVLDPVTGDLSDTRTRYLGSRPVKLFRVR R T V T R T 0 1 0 3 0 0 0 1 0 0 2 0 0 0 1 1 3 0 0 2 0 0 14 0 1487.7468 Q15393 Q15393 677 690 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.00043048 148.78 By MS/MS By matching 3.17 1.34 1 1 1 2 1 5 1 4311000 4262700 48293 14073 1508 14888 35941;35942;35943;35944;35945;35946 28723;28724;28725;28726;28727 28725 5 491910 102900 TVLDQQQTPSR QVRRDYLKEAVTTLKTVLDQQQTPSRLAVT TTLKTVLDQQQTPSRLAVTRVIQALAMKGD K T V S R L 0 1 0 1 0 3 0 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 11 0 1271.647 P42704 P42704 1129 1139 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.9456E-09 213.35 By MS/MS By MS/MS 4.13 1.78 1 1 4 4 2 1 1 1 13 2 70518000 69745000 772800 14074 886 14889 35947;35948;35949;35950;35951;35952;35953;35954;35955;35956;35957;35958;35959;35960;35961 28728;28729;28730;28731;28732;28733;28734;28735;28736;28737;28738;28739;28740 28733 13 1885000 181250 TVLEHYALEDDPLAAFK AFLKTIALNGVEDVRTVLEHYALEDDPLAA LEHYALEDDPLAAFKQRQSRLEQEEQQRLA R T V F K Q 3 0 0 2 0 0 2 0 1 0 3 1 0 1 1 0 1 0 1 1 0 0 17 0 1930.9676 Q3ZCQ8 Q3ZCQ8 296 312 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 0.00021942 170 By MS/MS 7 0 2 2 589100 589100 0 14075 1580 14890 35962;35963 28741;28742 28741 2 9247.8 0 TVLEQVLPI EFEVIFPERIPQTSRTVLEQVLPI______ IPQTSRTVLEQVLPI_______________ R T V P I - 0 0 0 0 0 1 1 0 0 1 2 0 0 0 1 0 1 0 0 2 0 0 9 0 1010.6012 P25685 P25685 332 340 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.052085 75.043 By MS/MS 8 0.816 1 1 1 3 898060 898060 0 14076 722 14891 35964;35965;35966 28743 28743 1 14142 0 TVLGTPEVLLGALPGAGGTQR VAISCQYRIATKDRKTVLGTPEVLLGALPG EVLLGALPGAGGTQRLPKMVGVPAALDMML K T V Q R L 2 1 0 0 0 1 1 5 0 0 4 0 0 0 2 0 3 0 0 2 0 0 21 0 2006.116 P40939 P40939 167 187 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0040355 86.944 By MS/MS 5.5 0.5 1 1 2 292680 292680 0 14077 865 14892 35967;35968 28744 28744 0 2445.3 0 TVLIMELINNVAK KGGKIGLFGGAGVGKTVLIMELINNVAKAH GKTVLIMELINNVAKAHGGYSVFAGVGERT K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 3.5124E-17 260.98 By MS/MS 7 0.816 2 2 2 6 11659000 11659000 0 14078 497 14893;14894 35969;35970;35971;35972;35973;35974 28745;28746;28747;28748;28749;28750 28745 203 6 90492 0 TVLITGANSGLGR QRLRRGGDPGLMHGKTVLITGANSGLGRAT GKTVLITGANSGLGRATAAELLRLGARVIM K T V G R A 1 1 1 0 0 0 0 3 0 1 2 0 0 0 0 1 2 0 0 1 0 0 13 0 1257.7041 Q9HBH5 Q9HBH5 45 57 RDH14 Retinol dehydrogenase 14 yes yes 2 1.631E-08 223.77 By MS/MS 7.5 0.5 1 1 2 4453300 4453300 0 14079 2505 14895 35975;35976 28751 28751 1 57834 0 TVLSNVQEELDR GAGGVQSTAKKSGQKTVLSNVQEELDRMTR GQKTVLSNVQEELDRMTRKPDSMVTNSSTE K T V D R M 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 12 0 1401.71 O43237 O43237 463 474 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 2 0.00036447 139.76 By MS/MS 6 0 1 1 2906700 2906700 0 14080 197 14896 35977 28752 28752 1 19981 0 TVMDEGPQVFAPLSEESK DISTEDGDRLYSLCKTVMDEGPQVFAPLSE DEGPQVFAPLSEESKNKKYQEEVPVYVPKW K T V S K N 1 0 0 1 0 1 3 1 0 0 1 1 1 1 2 2 1 0 0 2 0 0 18 0 1962.9245 O43264 O43264 688 705 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 4.6535E-17 260.29 By MS/MS 4 0 2 2 2921200 2921200 0 14081 200 14897;14898 35978;35979 28753;28754 28754 103 2 274900 0 TVMVQEGNVESAYR ______________________________ RTVMVQEGNVESAYRTLNRILTMDGLIEDI R T V Y R T 1 1 1 0 0 1 2 1 0 0 0 0 1 0 0 1 1 0 1 3 0 0 14 0 1581.7457 P82921 P82921 11 24 MRPS21 28S ribosomal protein S21, mitochondrial yes yes 2 7.1757E-24 299.42 By MS/MS By matching 10 0 3 2 1 4117400 4067600 49872 14082 1236 14899;14900 35980;35981;35982 28755;28756 28756 745 2 219230 63849 TVNELQNLTAAEVVVPR VPASAAGRVIGKGGKTVNELQNLTAAEVVV NELQNLTAAEVVVPRDQTPDENDQVIVKII K T V P R D 2 1 2 0 0 1 2 0 0 0 2 0 0 0 1 0 2 0 0 4 0 0 17 0 1852.0054 Q9NZI8 Q9NZI8 509 525 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2;3 3.8384E-17 299.25 By MS/MS 5 0 2 2 3515900 3515900 0 14083 2649 14901 35983;35984 28757;28758 28757 2 35263 0 TVNESHGSVER PRKLCDSARNLEWLKTVNESHGSVERSSLT EWLKTVNESHGSVERSSLTLATAINQRGIY K T V E R S 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 2 1 0 0 2 0 0 11 0 1213.5687 Q63HN8 Q63HN8 1521 1531 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0012845 115.91 By MS/MS 1 0 1 1 46745 46745 0 14084 1664 14902 35985 28759 28759 1 11264 0 TVNTFSQSVSSLFGEDNVR GARGRGGAEKNSYRRTVNTFSQSVSSLFGE FSQSVSSLFGEDNVRAAQKFLARLTERFVL R T V V R A 0 1 2 1 0 1 1 1 0 0 1 0 0 2 0 4 2 0 0 3 0 0 19 0 2085.9967 Q8WY22 Q8WY22 49 67 BRI3BP BRI3-binding protein yes yes 2 2.5329E-07 204.17 By MS/MS 9 0 1 1 77417 77417 0 14085 2042 14903 35986 28760;28761 28760 2 1523.6 0 TVPILFASTVR LKVKAKVRQCLQERRTVPILFASTVRRHPD QERRTVPILFASTVRRHPDKTALIFEGTDT R T V V R R 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 2 0 0 2 0 0 11 0 1202.7023 Q6P1M0 Q6P1M0 75 85 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.00023376 140.17 By MS/MS 3.5 2.06 1 1 1 1 4 618650 618650 0 14086 1700 14904 35987;35988;35989;35990 28762;28763;28764 28763 3 103600 0 TVPLLAACLPQDK LYIIQHPAEENKVLRTVPLLAACLPQDKCK LRTVPLLAACLPQDKCKVKIGRRFSEERDP R T V D K C 2 0 0 1 1 1 0 0 0 0 3 1 0 0 2 0 1 0 0 1 0 0 13 0 1424.7697 Q8NBA8 Q8NBA8 110 122 DTWD2 DTW domain-containing protein 2 yes yes 2 0.0015145 116.84 By MS/MS 7 0 1 1 465450 465450 0 14087 1938 14905 35991 28765 28765 1 7306.8 0 TVQAGLGQADALTR REAGPDARRCWRFWRTVQAGLGQADALTRK RTVQAGLGQADALTRKRARYLLQRAVEVSA R T V T R K 3 1 0 1 0 2 0 2 0 0 2 0 0 0 0 0 2 0 0 1 0 0 14 0 1399.7419 Q13395 Q13395 268 281 TARBP1 Probable methyltransferase TARBP1 yes yes 2 2.2348E-07 214.61 By MS/MS 3 0.816 1 1 1 3 1940400 1940400 0 14088 1376 14906 35992;35993;35994 28766;28767 28767 2 170410 0 TVQDALESLVAR PFFTLQLDIQSDKIRTVQDALESLVARESV KIRTVQDALESLVARESVQGYTTKTKQEVE R T V A R E 2 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 12 0 1300.6987 Q14694 Q14694 642 653 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 2.3107E-06 196.16 By MS/MS 4.5 0.5 1 1 2 582520 582520 0 14089 1453 14907 35995;35996 28768 28768 1 46994 0 TVQGPPTSDDIFER VHSSVASATSVATKKTVQGPPTSDDIFERE KTVQGPPTSDDIFEREYKYGAHNYHPLPVA K T V E R E 0 1 0 2 0 1 1 1 0 1 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1560.742 P04181 P04181 33 46 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 1.9407E-05 197.38 By MS/MS 7 0 1 1 2132500 2132500 0 14090 470 14908 35997 28769 28769 1 33477 0 TVQGPPTSDDIFEREYK VHSSVASATSVATKKTVQGPPTSDDIFERE QGPPTSDDIFEREYKYGAHNYHPLPVALER K T V Y K Y 0 1 0 2 0 1 2 1 0 1 0 1 0 1 2 1 2 0 1 1 0 0 17 1 1980.9429 P04181 P04181 33 49 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 3 0.045227 61.444 By MS/MS 7 0 1 1 484440 484440 0 14091 470 14909 35998 28770 28770 1 7604.9 0 TVQLTSSELESTLETLK DAHLLVESKNLDFQKTVQLTSSELESTLET QLTSSELESTLETLKAENQPIRDVLKQLIL K T V L K A 0 0 0 0 0 1 3 0 0 0 4 1 0 0 0 3 4 0 0 1 0 0 17 0 1877.9834 P42704 P42704 656 672 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.2012E-33 302.2 By MS/MS 3.5 0.5 1 1 2 299970 299970 0 14092 886 14910 35999;36000 28771;28772 28772 2 23347 0 TVQSNSPISALAPTGK ENKQFKEEDGLRMRKTVQSNSPISALAPTG VQSNSPISALAPTGKEEGLSTRLLALVVLF K T V G K E 2 0 1 0 0 1 0 1 0 1 1 1 0 0 2 3 2 0 0 1 0 0 16 0 1569.8362 O95292 O95292 201 216 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 6.9701E-11 274.39 By MS/MS 8.5 0.5 1 1 2 2016900 2016900 0 14093 401 14911 36001;36002 28773 28773 1 26411 0 TVQTDHNAVQR NDKNIRYVALTSLLKTVQTDHNAVQRHRST SLLKTVQTDHNAVQRHRSTIVDCLKDLDVS K T V Q R H 1 1 1 1 0 2 0 0 1 0 0 0 0 0 0 0 2 0 0 2 0 0 11 0 1267.6269 O43747 O43747 335 345 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 6.3598E-06 176.6 By MS/MS 4 0 1 1 442500 442500 0 14094 231 14912 36003 28774 28774 1 41642 0 TVSDLIDQK VIPEVIKNFIQYFHKTVSDLIDQKVYELQA IQYFHKTVSDLIDQKVYELQASRVSSDVID K T V Q K V 0 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 1017.5342 Q9Y262 Q9Y262 62 70 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.00049743 146.79 By MS/MS 6.75 1.48 1 1 1 1 4 35743000 35743000 0 14095 2814 14913 36004;36005;36006;36007 28775;28776;28777;28778 28777 4 344040 0 TVSDLIDQKVYELQASR VIPEVIKNFIQYFHKTVSDLIDQKVYELQA SDLIDQKVYELQASRVSSDVIDQKVYEIQD K T V S R V 1 1 0 2 0 2 1 0 0 1 2 1 0 0 0 2 1 0 1 2 0 0 17 1 1964.0215 Q9Y262 Q9Y262 62 78 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 4.1176E-06 185.66 By MS/MS 5.67 0.471 1 2 3 6664200 6664200 0 14096 2814 14914 36008;36009;36010 28779;28780;28781 28781 3 50839 0 TVSKVDDFLANEAK LNMNDHGFVVCAFNRTVSKVDDFLANEAKG RTVSKVDDFLANEAKGTKVVGAQSLKEMVS R T V A K G 2 0 1 2 0 0 1 0 0 0 1 2 0 1 0 1 1 0 0 2 0 0 14 1 1535.7831 P52209 P52209 35 48 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2;3 0.0045679 126.56 By MS/MS 6.5 0.5 2 2 4 12523000 12523000 0 14097 1011 14915 36011;36012;36013;36014 28782;28783 28782 2 101860 0 TVSLLDENNVSSYLSK SRSQGCSEQVLTVLKTVSLLDENNVSSYLS VSLLDENNVSSYLSKNILAFRDQNILLGTT K T V S K N 0 0 2 1 0 0 1 0 0 0 3 1 0 0 0 4 1 0 1 2 0 0 16 0 1767.8891 P78527 P78527 3303 3318 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 9.6007E-44 321.86 By MS/MS 2.5 1.12 1 1 1 1 4 1873500 1873500 0 14098 1225 14916 36015;36016;36017;36018 28784;28785;28786;28787 28787 4 359020 0 TVSPDRLELEAAQK ______________________________ KTVSPDRLELEAAQKFLERAAVENLPTFLV K T V Q K F 2 1 0 1 0 1 2 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 14 1 1555.8206 Q14974 Q14974 10 23 KPNB1 Importin subunit beta-1 yes yes 2 0.0024237 133.32 By MS/MS 4 0 1 1 4332700 4332700 0 14099 1462 14917 36019 28788;28789 28788 2 407740 0 TVSSPPTSPR QGATAGASSELDASKTVSSPPTSPRPGSAA LDASKTVSSPPTSPRPGSAATVSASTSNII K T V P R P 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 1 0 0 10 0 1027.5298 O76094 O76094 618 627 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.021861 101.25 By MS/MS 8 1.41 1 1 1 1 1 5 5231700 0 5231700 14100 362 14918 36020;36021;36022;36023;36024 28790 28790 1 0 7691300 TVTAAGAENIQQK QATQGNISSDRGKKRTVTAAGAENIQQKTD KRTVTAAGAENIQQKTDEKVDESGPPAPSK R T V Q K T 3 0 1 0 0 2 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 13 0 1329.6888 Q29RF7 Q29RF7 1240 1252 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.0025352 110.93 By MS/MS 3 0 1 1 411080 411080 0 14101 1565 14919 36025 28791 28791 1 7521.6 0 TVTAMDVVYALK VIRDAVTYTEHAKRKTVTAMDVVYALKRQG KRKTVTAMDVVYALKRQGRTLYGFGG____ K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 1.2394E-05 179.1 By MS/MS 9.67 0.471 1 2 3 434560 434560 0 14102 1170 14920 36026;36027;36028 28792;28793 28792 668 2 18481 0 TVTDEEINFVK SSRSSMEMPSQPAPRTVTDEEINFVKTCLQ PAPRTVTDEEINFVKTCLQRWRSEIEQDIQ R T V V K T 0 0 1 1 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 2 0 0 11 0 1293.6452 Q96RU2 Q96RU2 532 542 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 2 0.040747 75.652 By MS/MS 3 0 1 1 149030 149030 0 14103 2228 14921 36029 28794 28794 0 2726.8 0 TVTEYKIDEDGK APLPPPKEVINGNIKTVTEYKIDEDGKKFK NIKTVTEYKIDEDGKKFKIVRTFRIETRKA K T V G K K 0 0 0 2 0 0 2 1 0 1 0 2 0 0 0 0 2 0 1 1 0 0 12 1 1396.6722 O75821 O75821 66 77 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.014851 109.39 By MS/MS 7 0 1 1 1088000 1088000 0 14104 348 14922 36030 28795 28795 1 17080 0 TVTEYKIDEDGKK APLPPPKEVINGNIKTVTEYKIDEDGKKFK IKTVTEYKIDEDGKKFKIVRTFRIETRKAS K T V K K F 0 0 0 2 0 0 2 1 0 1 0 3 0 0 0 0 2 0 1 1 0 0 13 2 1524.7672 O75821 O75821 66 78 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3;4 6.8204E-07 220.5 By MS/MS 7.33 0.943 1 3 1 1 6 48325000 48325000 0 14105 348 14923 36031;36032;36033;36034;36035;36036 28796;28797;28798;28799;28800 28798 5 752870 0 TVTIVVR SGKLLKITGCASPGKTVTIVVRGSNKLVIE TGCASPGKTVTIVVRGSNKLVIEEAERSIH K T V V R G 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 3 0 0 7 0 786.49634 P50991 P50991 385 391 CCT4 T-complex protein 1 subunit delta yes yes 2 0.014248 124.37 By MS/MS 6.5 1.12 1 1 1 1 4 21105000 21105000 0 14106 985 14924 36037;36038;36039;36040 28801 28801 1 169030 0 TVTLKEDPGKV SVDPDSHQGKLVFNRTVTLKEDPGKV____ VFNRTVTLKEDPGKV_______________ R T V K V - 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 0 2 0 0 2 0 0 11 2 1185.6605 P47897 P47897 765 775 QARS Glutamine--tRNA ligase yes yes 3 0.0067663 96.171 By MS/MS 4.5 0.5 1 1 2 1766200 1766200 0 14107 928 14925 36041;36042 28802 28802 1 151570 0 TVTLPENEDELESTNR APGVRVSGDDVIIGKTVTLPENEDELESTN VTLPENEDELESTNRRYTKRDCSTFLRTSE K T V N R R 0 1 2 1 0 0 4 0 0 0 2 0 0 0 1 1 3 0 0 1 0 0 16 0 1845.8592 P30876 P30876 870 885 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00030476 172.58 By MS/MS 3 0 1 1 411770 411770 0 14108 781 14926 36043 28803 28803 1 7534.2 0 TVTNAVVTVPAYFNDSQR VLTKMKEIAEAYLGKTVTNAVVTVPAYFND NAVVTVPAYFNDSQRQATKDAGTIAGLNVL K T V Q R Q 2 1 2 1 0 1 0 0 0 0 0 0 0 1 1 1 3 0 1 4 0 0 18 0 1980.9905 P11142 P11142 138 155 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 2.9589E-24 273.07 By MS/MS By matching 6.25 1.48 4 1 1 1 1 7 1 73431000 73335000 95873 14109 572 14927 36044;36045;36046;36047;36048;36049;36050;36051 28804;28805;28806;28807;28808;28809;28810;28811 28804 8 737090 80513 TVTPALSSNVLPR GPPKDSSAPGGPPERTVTPALSSNVLPRHL ERTVTPALSSNVLPRHLGSPATSVPGMGLH R T V P R H 1 1 1 0 0 0 0 0 0 0 2 0 0 0 2 2 2 0 0 2 0 0 13 0 1353.7616 Q9C0E8 Q9C0E8 211 223 LNP Protein lunapark yes yes 2 0.0078332 101.3 By MS/MS 6 0 1 1 1830500 1830500 0 14110 2394 14928 36052 28812 28812 1 12583 0 TVVDSEGRTETTVTR VTKITKPDGIVEERRTVVDSEGRTETTVTR TVVDSEGRTETTVTRHEADSSPRGDPESPR R T V T R H 0 2 0 1 0 0 2 1 0 0 0 0 0 0 0 1 5 0 0 3 0 0 15 1 1649.822 O00165 O00165 228 242 HAX1 HCLS1-associated protein X-1 yes yes 2;3 0.0026996 152.96 By MS/MS 7.5 0.5 2 2 4 6122700 6122700 0 14111 86 14929 36053;36054;36055;36056 28813;28814;28815 28815 3 89839 0 TVVDSEGRTETTVTRHEADSSPR VTKITKPDGIVEERRTVVDSEGRTETTVTR TETTVTRHEADSSPRGDPESPRPPALDDAF R T V P R G 1 3 0 2 0 0 3 1 1 0 0 0 0 0 1 3 5 0 0 3 0 0 23 2 2529.2055 O00165 O00165 228 250 HAX1 HCLS1-associated protein X-1 yes yes 3 0.051386 54.875 By MS/MS 7.5 0.5 1 1 2 1033700 1033700 0 14112 86 14930 36057;36058 28816 28816 1 15371 0 TVVEALFQR EESVFAVTAVNASEKTVVEALFQRDSLVRQ VNASEKTVVEALFQRDSLVRQSQLVVDWLE K T V Q R D 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 9 0 1061.5869 P57740 P57740 251 259 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.00066887 141.52 By MS/MS 4 0 1 1 1017100 1017100 0 14113 1082 14931 36059 28817 28817 1 95714 0 TVVNKDVFRDPALK HLMPTRYSVDIPLDKTVVNKDVFRDPALKR KTVVNKDVFRDPALKRKARREAKVKFEERY K T V L K R 1 1 1 2 0 0 0 0 0 0 1 2 0 1 1 0 1 0 0 3 0 0 14 2 1600.8937 P61353 P61353 94 107 RPL27 60S ribosomal protein L27 yes yes 3 0.0011535 118.87 By MS/MS 9.5 0.5 1 1 2 2699400 2699400 0 14114 1122 14932 36060;36061 28818;28819 28818 2 85539 0 TVVTGIEMFHK KGDECELLGHSKNIRTVVTGIEMFHKSLER KNIRTVVTGIEMFHKSLERAEAGDNLGALV R T V H K S 0 0 0 0 0 0 1 1 1 1 0 1 1 1 0 0 2 0 0 2 0 0 11 0 1260.6536 P49411 P49411 301 311 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 4.9622E-09 204.79 By MS/MS By matching 7.56 0.685 5 3 1 8 1 42941000 42897000 43952 14115 949 14933;14934 36062;36063;36064;36065;36066;36067;36068;36069;36070 28820;28821;28822;28823;28824;28825 28824 524 6 663380 79157 TVYCNVHK TVRSTGPAKSRDGERTVYCNVHKHEPLVLF KSRDGERTVYCNVHKHEPLVLFCESCDTLT R T V H K H 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 1 2 0 0 8 0 1019.4859 Q13263 Q13263 206 213 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.013109 95.352 By MS/MS 4.5 0.5 1 1 2 1017900 1017900 0 14116 1367 14935 36071;36072 28826 28826 1 86527 0 TVYHAEEVQCDGR MPVWGGGNKCGACGRTVYHAEEVQCDGRSF GRTVYHAEEVQCDGRSFHRCCFLCMVCRKN R T V G R S 1 1 0 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 1 2 0 0 13 0 1562.6784 Q16527 Q16527 16 28 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2;3 0.00018046 179.94 By MS/MS 9 0 2 2 1673200 1673200 0 14117 1548 14936 36073;36074 28827;28828 28827 2 32929 0 TVYSILR PEEAIKCEDKFTKSKTVYSILRHVAEVLEY EDKFTKSKTVYSILRHVAEVLEYTKDEQLE K T V L R H 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 0 7 0 850.49125 P05198 P05198 107 113 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.017023 117.16 By MS/MS 7.5 0.5 1 1 2 13257000 13257000 0 14118 489 14937 36075;36076 28829 28829 1 204030 0 TVYVSVLPTTADF QEITEDIPVKTLNMKTVYVSVLPTTADF__ MKTVYVSVLPTTADF_______________ K T V D F - 1 0 0 1 0 0 0 0 0 0 1 0 0 1 1 1 3 0 1 3 0 0 13 0 1411.7235 P41252 P41252 1250 1262 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00045162 136.63 By MS/MS 4.5 1.12 1 1 1 1 4 1017200 1017200 0 14119 871 14938 36077;36078;36079;36080 28830;28831;28832 28832 3 36129 0 TWAGKEELLK LGMILTALLQGLAGRTWAGKEELLKAIACV GLAGRTWAGKEELLKAIACVVTACSAELEK R T W L K A 1 0 0 0 0 0 2 1 0 0 2 2 0 0 0 0 1 1 0 0 0 0 10 1 1173.6394 Q5VYK3 Q5VYK3 1581 1590 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0042335 126.39 By MS/MS 2 0 1 1 563850 563850 0 14120 1656 14939 36081 28833 28833 1 190720 0 TWEKLLLAAR YKRKSDGIYIINLKRTWEKLLLAARAIVAI INLKRTWEKLLLAARAIVAIENPADVSVIS R T W A R A 2 1 0 0 0 0 1 0 0 0 3 1 0 0 0 0 1 1 0 0 0 0 10 1 1199.7026 P08865 P08865 54 63 RPSA 40S ribosomal protein SA yes yes 2;3 0.0052832 109.66 By MS/MS 7 0 2 2 670120 670120 0 14121 529 14940 36082;36083 28834;28835 28835 2 10520 0 TWIEVSGSSAK VYIVFMLGSCAFFSKTWIEVSGSSAKDVAK FFSKTWIEVSGSSAKDVAKQLKEQQMVMRG K T W A K D 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 3 1 1 0 1 0 0 11 0 1163.5823 P61619 P61619 378 388 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 2 0.040859 83.499 By MS/MS 1 0 1 1 0 0 0 14122 1127 14941 36084 28836 28836 1 0 0 TWNDPSVQQDIK NPENTVFDAKRLIGRTWNDPSVQQDIKFLP IGRTWNDPSVQQDIKFLPFKVVEKKTKPYI R T W I K F 0 0 1 2 0 2 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 12 0 1429.6838 P11021 P11021 102 113 HSPA5 78 kDa glucose-regulated protein yes yes 2 3.1749E-25 288.11 By MS/MS By MS/MS 5.4 1.02 1 2 1 1 4 1 25015000 24972000 43138 14123 571 14942 36085;36086;36087;36088;36089 28837;28838 28838 2 281700 36226 TWQANLR QNRWALWFFKNDKSKTWQANLRLISKFDTV FFKNDKSKTWQANLRLISKFDTVEDFWALY K T W L R L 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 7 0 887.46135 P06730 P06730 55 61 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.041333 96.19 By MS/MS 8.5 0.5 1 1 2 6464900 6464900 0 14124 499 14943 36090;36091 28839 28839 1 92211 0 TWQDSDTVK SSQKVSPIQIDGAGRTWQDSDTVKLLVDLE IDGAGRTWQDSDTVKLLVDLELSYGFENGQ R T W V K L 0 0 0 2 0 1 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 9 0 1078.4931 Q8NFQ8 Q8NFQ8 336 344 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 2 0.05453 73.985 By MS/MS 5 0 1 1 633690 633690 0 14125 1965 14944 36092 28840 28840 1 6355.5 0 TYAICGAIR AEVDKVTGRFNGQFKTYAICGAIRRMGESD FNGQFKTYAICGAIRRMGESDDSILRLAKA K T Y I R R 2 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1023.5172 P63220 P63220 52 60 RPS21 40S ribosomal protein S21 yes yes 2 0.00065262 145.34 By MS/MS By MS/MS 9.33 0.943 1 2 1 2 27619000 27237000 382540 14126 1200 14945 36093;36094;36095 28841;28842;28843 28842 3 1468000 493090 TYASGYAHYEEQEN DTESSDLFTNLNLGRTYASGYAHYEEQEN_ RTYASGYAHYEEQEN_______________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 4.6317E-11 233.13 By MS/MS 7 0 1 1 659350 659350 0 14127 2884 14946 36096 28844 28844 1 10351 0 TYAVGIQQVLLK NVTKEYFEFSEFFLKTYAVGIQQVLLKILD FLKTYAVGIQQVLLKILDQYRQKEYVAPRV K T Y L K I 1 0 0 0 0 2 0 1 0 1 2 1 0 0 0 0 1 0 1 2 0 0 12 0 1331.7813 O15397 O15397 296 307 IPO8 Importin-8 yes yes 2 5.7554E-07 201.61 By MS/MS 4 0 1 1 707090 707090 0 14128 188 14947 36097 28845 28845 1 66541 0 TYDYLFK ______________________________ ______________________________ K T Y F K L 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 1 0 2 0 0 0 7 0 948.45928 P61006;Q92930 P61006 4 10 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B yes no 2 0.043363 94.662 By MS/MS 9 0 1 1 398190 398190 0 14129 1102 14948 36098 28846 28846 1 7836.5 0 TYEAALETIQNMSK GEGVLIIFDEPPVDKTYEAALETIQNMSKV KTYEAALETIQNMSKVVDSLYNKAKKLT__ K T Y S K V 2 0 1 0 0 1 2 0 0 1 1 1 1 0 0 1 2 0 1 0 0 0 14 0 1597.7658 O00231 O00231 396 409 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 5.7926E-19 236.08 By MS/MS 7 0 1 1 0 0 0 14130 93 14949 36099 28847 28847 1 0 0 TYEDIDKR QFEPDSTEYIKVHHKTYEDIDKRGKYDLLR YIKVHHKTYEDIDKRGKYDLLRSTRYFGGM K T Y K R G 0 1 0 2 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 8 1 1038.4982 P82650 P82650 249 256 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2;3 0.042393 101.25 By MS/MS 7 0 2 2 4219500 4219500 0 14131 1229 14950 36100;36101 28848;28849 28848 2 66239 0 TYEEGLKHEANNPQLK AAALEFLNRFEEAKRTYEEGLKHEANNPQL YEEGLKHEANNPQLKEGLQNMEARLAERKF R T Y L K E 1 0 2 0 0 1 3 1 1 0 2 2 0 0 1 0 1 0 1 0 0 0 16 1 1869.9221 P31948 P31948 94 109 STIP1 Stress-induced-phosphoprotein 1 yes yes 3;4 0.01938 75.316 By MS/MS 5.5 0.5 2 2 4 5935400 5935400 0 14132 795 14951 36102;36103;36104;36105 28850;28851;28852;28853 28852 4 56616 0 TYEGSFNALLR VRLRLYDILALLPPKTYEGSFNALLRELVA LPPKTYEGSFNALLRELVAEFTLTDNSANT K T Y L R E 1 1 1 0 0 0 1 1 0 0 2 0 0 1 0 1 1 0 1 0 0 0 11 0 1269.6354 Q9P2D3 Q9P2D3 684 694 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.00998 102.07 By MS/MS 2 0 1 1 0 0 0 14133 2681 14952 36106 28854 28854 1 0 0 TYEVNEVGVLNPNEQPTHK VVSKGDKIVSAHTQKTYEVNEVGVLNPNEQ NEVGVLNPNEQPTHKLYAGQVGYLIAGMKD K T Y H K L 0 0 3 0 0 1 3 1 1 0 1 1 0 0 2 0 2 0 1 3 0 0 19 0 2167.0546 Q8N442 Q8N442 294 312 GUF1 Translation factor GUF1, mitochondrial yes yes 3 9.9913E-05 130.77 By MS/MS 5 0 1 1 2082100 2082100 0 14134 1914 14953 36107 28855 28855 1 20882 0 TYGEPESAGPSR GYNDDYYEESYFTTRTYGEPESAGPSRAVR TTRTYGEPESAGPSRAVRQSVTSFPDADAF R T Y S R A 1 1 0 0 0 0 2 2 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1249.5575 P50402 P50402 104 115 EMD Emerin yes yes 2 3.8628E-06 181.53 By MS/MS By MS/MS 8.29 1.03 2 2 2 1 4 3 68474000 67857000 616820 14135 973 14954 36108;36109;36110;36111;36112;36113;36114 28856;28857;28858;28859;28860;28861;28862 28856 7 1064400 1037100 TYGQSTYSR KPIRALDEGDIALLKTYGQSTYSRQIKQVE DIALLKTYGQSTYSRQIKQVEDDIQQLLKK K T Y S R Q 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 2 0 2 0 0 0 9 0 1061.4778 P35998 P35998 35 43 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.0018717 122.94 By MS/MS By matching 7 0.707 1 2 1 3 1 6003600 5981200 22338 14136 831 14955 36115;36116;36117;36118 28863;28864 28864 2 65754 40231 TYGVSFFLVK IEAKVRYVKLARSLKTYGVSFFLVKEKMKG ARSLKTYGVSFFLVKEKMKGKNKLVPRLLG K T Y V K E 0 0 0 0 0 0 0 1 0 0 1 1 0 2 0 1 1 0 1 2 0 0 10 0 1159.6277 Q9Y490;Q9Y4G6 Q9Y490 307 316 TLN1;TLN2 Talin-1;Talin-2 no no 2 0.010513 93.178 By MS/MS 2 0 1 1 72739 72739 0 14137 2888;2895 14956 36119 28865 28865 1 24603 0 TYHALSNLPK DDKALLVEVQLLESKTYHALSNLPKARAAL LLESKTYHALSNLPKARAALTSARTTANAI K T Y P K A 1 0 1 0 0 0 0 0 1 0 2 1 0 0 1 1 1 0 1 0 0 0 10 0 1142.6084 O00231 O00231 176 185 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2;3 0.00044536 132.88 By MS/MS 7.33 0.471 2 1 3 9364900 9364900 0 14138 93 14957 36120;36121;36122 28866;28867 28866 2 146220 0 TYHSVGDSVLR CGPSSAVCMHDLKTRTYHSVGDSVLRSATR LKTRTYHSVGDSVLRSATRSLLEFNTTVSC R T Y L R S 0 1 0 1 0 0 0 1 1 0 1 0 0 0 0 2 1 0 1 2 0 0 11 0 1232.6149 P11717 P11717 92 102 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.017045 79.07 By MS/MS 1 0 1 1 110060 110060 0 14139 583 14958 36123 28868 28868 1 26520 0 TYHYHCGVQDK QPGATIGCEIKACVKTYHYHCGVQDKAKYI ACVKTYHYHCGVQDKAKYIENMSRGIYKLY K T Y D K A 0 0 0 1 1 1 0 1 2 0 0 1 0 0 0 0 1 0 2 1 0 0 11 0 1406.6037 Q8IWS0 Q8IWS0 300 310 PHF6 PHD finger protein 6 yes yes 3 0.0056781 99.568 By MS/MS 7 0 1 1 812130 812130 0 14140 1869 14959 36124 28869 28869 1 12749 0 TYIQCIAAISR LLSELSKNDSMSTTRTYIQCIAAISRQAGH STTRTYIQCIAAISRQAGHRIGEYLEKIIP R T Y S R Q 2 1 0 0 1 1 0 0 0 3 0 0 0 0 0 1 1 0 1 0 0 0 11 0 1294.6704 Q86VP6 Q86VP6 233 243 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0029866 109.24 By MS/MS 3 0 1 1 115350 115350 0 14141 1831 14960 36125 28870 28870 1 2110.5 0 TYLEVVR FISELAEYLIKPLNKTYLEVVRSVFMSSTT YLIKPLNKTYLEVVRSVFMSSTTSASGTGR K T Y V R S 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 7 0 878.48617 O94874 O94874 512 518 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.036022 100.19 By MS/MS 4.5 0.5 1 1 2 4991600 4991600 0 14142 372 14961 36126;36127 28871 28871 1 430480 0 TYLQALPYFDR IGLLHRGTEKLIEYKTYLQALPYFDRLDYV IEYKTYLQALPYFDRLDYVSMMCNEQAYSL K T Y D R L 1 1 0 1 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 11 0 1385.698 O75306 O75306 128 138 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.0055244 102.53 By MS/MS 7 0 1 1 256640 256640 0 14143 308 14962 36128 28872 28872 1 4028.7 0 TYNNLDVSVTK DIYSKFDVINLAAEKTYNNLDVSVTKALQH AAEKTYNNLDVSVTKALQHRSHYFEGVLKC K T Y T K A 0 0 2 1 0 0 0 0 0 0 1 1 0 0 0 1 2 0 1 2 0 0 11 0 1252.6299 P54619 P54619 254 264 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 8.1158E-05 153.54 By MS/MS 7 0 1 1 1219300 1219300 0 14144 1044 14963 36129 28873 28873 1 19140 0 TYQGSYGFR PAPSWPLSSSVPSQKTYQGSYGFRLGFLHS SVPSQKTYQGSYGFRLGFLHSGTAKSVTCT K T Y F R L 0 1 0 0 0 1 0 2 0 0 0 0 0 1 0 1 1 0 2 0 0 0 9 0 1077.488 P04637 P04637 102 110 TP53 Cellular tumor antigen p53 yes yes 2 0.0087608 102.62 By MS/MS 7 0.816 1 1 1 3 6750900 6750900 0 14145 476 14964 36130;36131;36132 28874 28874 1 53081 0 TYQNLVIEK LTNAFVQKANDENRRTYQNLVIEKDGSNEG NDENRRTYQNLVIEKDGSNEGTYYMLLLTY R T Y E K D 0 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 9 0 1106.5972 P50748 P50748 135 143 KNTC1 Kinetochore-associated protein 1 yes yes 2 0.0022978 117.53 By MS/MS 1 0 1 1 112570 112570 0 14146 979 14965 36133 28875 28875 1 27125 0 TYSQVGFR TFPDLYRGLTDCCLKTYSQVGFRGFYKGTS LTDCCLKTYSQVGFRGFYKGTSPALIANIA K T Y F R G 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 1 1 0 1 1 0 0 8 0 956.47158 Q9Y619 Q9Y619 54 61 SLC25A15 Mitochondrial ornithine transporter 1 yes yes 2 0.023705 95.531 By MS/MS 8 0 1 1 2035400 2035400 0 14147 2931 14966 36134 28876 28876 1 25697 0 TYSVVPMTSR LAQDSACSQRALQLRTYSVVPMTSRLGLIE ALQLRTYSVVPMTSRLGLIEWLENTVTLKD R T Y S R L 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 2 2 0 1 2 0 0 10 0 1139.5645 P78527 P78527 3790 3799 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0039322 107.69 By MS/MS 2 0.816 2 2 2 6 2238600 2238600 0 14148 1225 14967;14968 36135;36136;36137;36138;36139;36140 28877;28878;28879;28880 28878 734 4 528980 0 TYSYLTPDLWK TLGNFAKATFDAISKTYSYLTPDLWKETVF AISKTYSYLTPDLWKETVFTKSPYQEFTDH K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 P15880 P15880 247 257 RPS2 40S ribosomal protein S2 yes yes 2 0.00025762 138.08 By MS/MS 7.5 0.5 1 1 2 4392200 4392200 0 14149 627 14969 36141;36142 28881 28881 1 55659 0 TYTDELTPIESAVSVFK YNLLSLRFNSRIRVKTYTDELTPIESAVSV TDELTPIESAVSVFKAANWYEREIWDMFGV K T Y F K A 1 0 0 1 0 0 2 0 0 1 1 1 0 1 1 2 3 0 1 2 0 0 17 0 1898.9513 O75489 O75489 145 161 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.00020441 155.86 By MS/MS 8 0 1 1 194180 194180 0 14150 330 14970 36143 28882;28883 28882 2 2451.5 0 TYTQLVR TPEKWDIITRKGGERTYTQLVRLIILDEIH ITRKGGERTYTQLVRLIILDEIHLLHDDRG R T Y V R L 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 7 0 879.48142 O75643 O75643 604 610 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.037102 99.375 By MS/MS 1.5 0.5 1 1 2 1289700 1289700 0 14151 340 14971 36144;36145 28884;28885 28885 2 381890 0 TYVVTGNMGSNDK VLNVIEGPVFRPGSKTYVVTGNMGSNDKVG SKTYVVTGNMGSNDKVGDFVATDLDTGRPS K T Y D K V 0 0 2 1 0 0 0 2 0 0 0 1 1 0 0 1 2 0 1 2 0 0 13 0 1384.6293 Q02413 Q02413 391 403 DSG1 Desmoglein-1 yes yes 2 0.00065676 145.09 By matching By MS/MS 3.33 1.8 1 2 1 1 1 1 5 335300 130790 204510 14152 1277 14972 36146;36147;36148;36149;36150;36151 28886;28887;28888 28887 764 3 44239 266230 TYYMSGGLQPVPIVFR FSMQAIDQVINSAAKTYYMSGGLQPVPIVF YYMSGGLQPVPIVFRGPNGASAGVAAQHSQ K T Y F R G 0 1 0 0 0 1 0 2 0 1 1 0 1 1 2 1 1 0 2 2 0 0 16 0 1826.9389 P11177 P11177 130 145 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 7.0221E-24 274.59 By MS/MS 7.33 0.471 2 1 3 1139900 1139900 0 14153 575 14973;14974 36152;36153;36154 28889;28890;28891;28892 28889 267 4 17268 0 VAAAESMPLLLECAR LMVPLLKFYFHDGVRVAAAESMPLLLECAR VAAAESMPLLLECARVRGPEYLTQMWHFMC R V A A R V 4 1 0 0 1 0 2 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 15 0 1629.8218 O00410 O00410 721 735 IPO5 Importin-5 yes yes 2 1.1099E-05 182.41 By MS/MS 5.2 1.17 2 1 1 1 5 4441900 4441900 0 14154 103 14975;14976 36155;36156;36157;36158;36159 28893;28894;28895;28896 28896 66 4 292200 0 VAAAQSQVQVLK QDAGERSRLQEFRRRVAAAQSQVQVLKEKK RRRVAAAQSQVQVLKEKKQATERLVSLSAQ R V A L K E 3 0 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 12 0 1240.7139 Q2M1P5 Q2M1P5 790 801 KIF7 Kinesin-like protein KIF7 yes yes 2 0.00033187 141.89 By MS/MS 3 0 1 1 365300 365300 0 14155 1566 14977 36160 28897 28897 1 6684 0 VAAAVDLIIK RVLEALLPLKGLEERVAAAVDLIIKSHQGL GLEERVAAAVDLIIKSHQGLDRQELSFAAR R V A I K S 3 0 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1011.6328 P49327 P49327 2397 2406 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0075696 99.802 By MS/MS 2.5 1.12 1 1 1 1 4 888150 888150 0 14156 946 14978 36161;36162;36163;36164 28898;28899 28898 2 180660 0 VAAGLQIK LSRVLANPGNSQVARVAAGLQIKNSLTSKD GNSQVARVAAGLQIKNSLTSKDPDIKAQYQ R V A I K N 2 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 798.49634 Q14974 Q14974 55 62 KPNB1 Importin subunit beta-1 yes yes 2 0.012259 108.24 By MS/MS 4 0 1 1 4834800 4834800 0 14157 1462 14979 36165 28900 28900 1 454990 0 VAAGTLDASTK SEILKQKDTEPTNFKVAAGTLDASTKIYAV TNFKVAAGTLDASTKIYAVRVDAVHADVYR K V A T K I 3 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1032.5451 Q15003 Q15003 153 163 NCAPH Condensin complex subunit 2 yes yes 2 0.0037552 107.21 By MS/MS 4 0.816 1 1 1 3 1961300 1961300 0 14158 1468 14980 36166;36167;36168 28901 28901 1 148610 0 VAAGVLCELAQDK LFVQLLYSSVENIQRVAAGVLCELAQDKEA QRVAAGVLCELAQDKEAADAIDAEGASAPL R V A D K E 3 0 0 1 1 1 1 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 13 0 1372.7021 P14923;P35222 P14923 603 615 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 no no 2 0.0026568 131.12 By MS/MS 3 0 1 1 95754 0 95754 14159 621;813 14981 36169 28902 28902 1 0 12188 VAAIEALNDGELQK AEITEEVMDQANDKKVAAIEALNDGELQKA KVAAIEALNDGELQKAIDLFTDAIKLNPRL K V A Q K A 3 0 1 1 0 1 2 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1469.7726 Q8IZP2;P50502 Q8IZP2 115 128 ST13P4;ST13 Putative protein FAM10A4;Hsc70-interacting protein yes no 2 2.6984E-11 239.48 By MS/MS By matching 6.33 0.471 2 1 2 1 7722400 7694000 28376 14160 976 14982 36170;36171;36172 28903 28903 1 59106 29077 VAAIQQILGK KASELNPESIYSVFKVAAIQQILGKYKEAV YSVFKVAAIQQILGKYKEAVAQYQMIIKKK K V A G K Y 2 0 0 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1039.639 Q6PGP7 Q6PGP7 638 647 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00010322 153.71 By MS/MS 3 0 1 1 293910 293910 0 14161 1716 14983 36173 28904 28904 1 5377.7 0 VAALQNLVK QVVCEATQCPDTRVRVAALQNLVKIMSLYY PDTRVRVAALQNLVKIMSLYYQYMETYMGP R V A V K I 2 0 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 954.58622 Q14974 Q14974 235 243 KPNB1 Importin subunit beta-1 yes yes 2 0.00062055 143 By MS/MS 4.5 0.5 1 1 2 5039300 5039300 0 14162 1462 14984 36174;36175 28905 28905 1 426420 0 VAALQTAADAFYK HIRASYAAEERIEGRVAALQTAADAFYKAK GRVAALQTAADAFYKAKNEFAAKATEDQMR R V A Y K A 5 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 13 0 1367.7085 Q9H269 Q9H269 648 660 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 0.00019422 163.45 By MS/MS 4 0 1 1 3607200 3607200 0 14163 2427 14985 36176 28906 28906 1 339460 0 VAAPDVVVPTLDTVR PWQAKVPQIEVETHKVAAPDVVVPTLDTVR VAAPDVVVPTLDTVRHEALLYTWLAEHKPL K V A V R H 2 1 0 2 0 0 0 0 0 0 1 0 0 0 2 0 2 0 0 5 0 0 15 0 1550.8668 Q14204 Q14204 2562 2576 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0043375 105.36 By MS/MS 1.5 0.5 1 1 2 1317900 1317900 0 14164 1433 14986 36177;36178 28907;28908;28909 28909 3 366520 0 VAAQCSHAAVSAYK MILVVRNDLKMGKGKVAAQCSHAAVSAYKQ KVAAQCSHAAVSAYKQIQRRNPEMLKQWEY K V A Y K Q 5 0 0 0 1 1 0 0 1 0 0 1 0 0 0 2 0 0 1 2 0 0 14 0 1461.7034 Q9Y3E5 Q9Y3E5 82 95 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 2 0.0010095 125.03 By MS/MS 9.5 0.5 1 1 2 1253000 1253000 0 14165 2876 14987 36179;36180 28910 28910 1 34236 0 VAASCGAIQYIPTELDQVR KNTPVRYTVYCSLIKVAASCGAIQYIPTEL CGAIQYIPTELDQVRKWISDWNLTTEKKHT K V A V R K 3 1 0 1 1 2 1 1 0 2 1 0 0 0 1 1 1 0 1 2 0 0 19 0 2090.0466 Q7L2H7 Q7L2H7 130 148 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 1.7847E-17 261.61 By MS/MS 7.5 0.5 1 1 2 5269900 5269900 0 14166 1762 14988 36181;36182 28911 28911 1 82223 0 VAASCGAIQYIPTELDQVRK KNTPVRYTVYCSLIKVAASCGAIQYIPTEL GAIQYIPTELDQVRKWISDWNLTTEKKHTL K V A R K W 3 1 0 1 1 2 1 1 0 2 1 1 0 0 1 1 1 0 1 2 0 0 20 1 2218.1416 Q7L2H7 Q7L2H7 130 149 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 1.0841E-05 144.08 By MS/MS 7.5 0.5 1 1 2 10773000 10773000 0 14167 1762 14989 36183;36184 28912 28912 1 167990 0 VAASNIVQMK IGIQGPDYVLVASDRVAASNIVQMKDDHDK VASDRVAASNIVQMKDDHDKMFKMSEKILL R V A M K D 2 0 1 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 2 0 0 10 0 1059.5747 P49721 P49721 20 29 PSMB2 Proteasome subunit beta type-2 yes yes 2 0.00058636 131.62 By MS/MS 9 0 1 1 956330 956330 0 14168 957 14990 36185 28913 28913 1 18821 0 VAASPEDIK WKPGYLDRALQVMEKVAASPEDIKLCREAL LQVMEKVAASPEDIKLCREALDVLGAVLKA K V A I K L 2 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 9 0 928.48656 Q92552 Q92552 266 274 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.011132 98.458 By MS/MS 7 0 1 1 2895700 2895700 0 14169 2054 14991 36186 28914 28914 1 45457 0 VAASPEDIKLCR WKPGYLDRALQVMEKVAASPEDIKLCREAL MEKVAASPEDIKLCREALDVLGAVLKALTS K V A C R E 2 1 0 1 1 0 1 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 12 1 1357.7024 Q92552 Q92552 266 277 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2;3 0.00018596 155.11 By MS/MS 7 0 2 2 11095000 11095000 0 14170 2054 14992 36187;36188 28915;28916 28916 2 174170 0 VAASTQPLGR ELIQLVAARLAEHERVAASTQPLGRIRALF AEHERVAASTQPLGRIRALFPAPLAQISTP R V A G R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 998.55089 Q8ND24 Q8ND24 610 619 RNF214 RING finger protein 214 yes yes 2 0.051823 71.451 By MS/MS By matching 3.75 0.829 2 1 1 3 1 1617200 1388800 228400 14171 1955 14993 36189;36190;36191;36192 28917 28917 1 72669 29071 VAASVLNPYVK EKELLRVAQILKEPKVAASVLNPYVKRSIK KEPKVAASVLNPYVKRSIKVKSLNDITAKE K V A V K R 2 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 3 0 0 11 0 1159.6601 P48047 P48047 74 84 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 1.6675E-06 182.39 By MS/MS By MS/MS 9 0.632 1 3 1 4 1 63102000 62900000 202100 14172 932 14994 36193;36194;36195;36196;36197 28918;28919;28920;28921;28922;28923 28921 6 1205600 460850 VACCPLER KPAVTQLLWERATEKVACCPLERCSSVMLL WERATEKVACCPLERCSSVMLLGMMARGKP K V A E R C 1 1 0 0 2 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1003.4579 Q15021 Q15021 764 771 NCAPD2 Condensin complex subunit 1 yes yes 2 0.011562 109.01 By MS/MS 3.5 0.5 1 1 2 859570 859570 0 14173 1474 14995 36198;36199 28924 28924 1 36833 0 VACPQCNAEYLIVFPK QRWVDEKQRGNSTARVACPQCNAEYLIVFP ACPQCNAEYLIVFPKLGPVVYVLDLADRLI R V A P K L 2 0 1 0 2 1 1 0 0 1 1 1 0 1 2 0 0 0 1 2 0 0 16 0 1907.9274 Q9NX47 Q9NX47 63 78 MARCH5 E3 ubiquitin-protein ligase MARCH5 yes yes 2 0.00036081 117.27 By MS/MS 8 0 1 1 312340 312340 0 14174 2619 14996 36200 28925 28925 1 3943.3 0 VADAATEVQHK SELSKSASAKSIDSKVADAATEVQHKTTEA IDSKVADAATEVQHKTTEALKSEEKAMDIS K V A H K T 3 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1167.5884 Q5SW79 Q5SW79 143 153 CEP170 Centrosomal protein of 170 kDa yes yes 2 1.2003E-05 171.33 By MS/MS By matching 2 0.816 1 1 1 2 1 809820 763130 46698 14175 1623 14997 36201;36202;36203 28926 28926 1 223790 46698 VADGGGAGGTFQPYLDTLR ______________________________ GGAGGTFQPYLDTLRQELQQTDPTLLSVVV R V A L R Q 2 1 0 2 0 1 0 5 0 0 2 0 0 1 1 0 2 0 1 1 0 0 19 0 1893.9221 Q9Y5M8 Q9Y5M8 9 27 SRPRB Signal recognition particle receptor subunit beta yes yes 2 1.1778E-11 238.07 By MS/MS 8.5 0.5 1 1 2 6514300 6514300 0 14176 2917 14998 36204;36205 28927 28927 1 83009 0 VADGLPLAASMQEDEQSGR ______________________________ LPLAASMQEDEQSGRDLQQYQSQAKQLFRK R V A G R D 3 1 0 2 0 2 2 2 0 0 2 0 1 0 1 2 0 0 0 1 0 0 19 0 1972.916 O75396 O75396 10 28 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 2.1757E-11 228.73 By MS/MS 8.67 0.471 1 2 3 2573800 2573800 0 14177 323 14999;15000 36206;36207;36208 28928;28929 28928 136 2 46408 0 VADIGLAAWGR ______________________________ LPYKVADIGLAAWGRKALDIAENEMPGLMR K V A G R K 3 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 1 0 0 11 0 1127.6087 P23526 P23526 9 19 AHCY Adenosylhomocysteinase yes yes 2 0.0011443 118.71 By MS/MS 7 0 1 1 1327200 1327200 0 14178 706 15001 36209 28930 28930 1 20835 0 VADISGDTQK NGKGLHSKKEVPIHRVADISGDTQKAKQFL VPIHRVADISGDTQKAKQFLPFLQRAGRSE R V A Q K A 1 0 0 2 0 1 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 10 0 1032.5088 Q7KZF4 Q7KZF4 504 513 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0083855 97.965 By MS/MS By matching 4 0 2 1 1 4013800 3978100 35740 14179 1755 15002 36210;36211 28931 28931 1 374360 76149 VADISGDTQKAK NGKGLHSKKEVPIHRVADISGDTQKAKQFL IHRVADISGDTQKAKQFLPFLQRAGRSEAV R V A A K Q 2 0 0 2 0 1 0 1 0 1 0 2 0 0 0 1 1 0 0 1 0 0 12 1 1231.6408 Q7KZF4 Q7KZF4 504 515 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.023851 104.07 By MS/MS 4 0 1 1 522600 522600 0 14180 1755 15003 36212 28932 28932 1 49180 0 VADLTEQYNEQYGAVR EGHWSKECPIDRSGRVADLTEQYNEQYGAV ADLTEQYNEQYGAVRTPYTMSYGDSLYYNN R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 7.9876E-34 313.52 By MS/MS 7.5 0.5 1 1 2 3661000 3661000 0 14181 2347 15004 36213;36214 28933 28933 1 56746 0 VADNQELQLSNLLSR HMRNLQQQELHRLLRVADNQELQLSNLLSR VADNQELQLSNLLSRDRISPEGLEKMAQLR R V A S R D 1 1 2 1 0 2 1 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 15 0 1698.8901 Q86US8 Q86US8 587 601 SMG6 Telomerase-binding protein EST1A yes yes 2 3.6159E-05 195.71 By MS/MS 4 0 1 1 189210 189210 0 14182 1824 15005 36215 28934 28934 1 17806 0 VADPPRDSK ______________________________ ______________________________ M V A S K G 1 1 0 2 0 0 0 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 9 1 983.50361 Q15758 Q15758 2 10 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.039372 104.01 By MS/MS 5 0.816 1 1 1 3 454070 454070 0 14183 1530 15006 36216;36217;36218 28935 28935 1 7241.3 0 VADTIVAK RGTSLEKLLFGDLLRVADTIVAKAADLKDL LFGDLLRVADTIVAKAADLKDLNSRAQGEV R V A A K A 2 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 815.47527 Q8NCM8 Q8NCM8 1236 1243 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.046652 83.753 By MS/MS 1.5 0.5 1 1 2 335360 335360 0 14184 1952 15007 36219;36220 28936 28936 1 94515 0 VADWTGATYQDK DMPYQPFSKGDRLGKVADWTGATYQDKRYT LGKVADWTGATYQDKRYTNKYSSQFGGGSQ K V A D K R 2 0 0 2 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 1 0 0 12 0 1353.6201 O15371 O15371 42 53 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 5.8195E-13 242.97 By MS/MS 5.5 0.5 1 1 2 8737500 8737500 0 14185 185 15008 36221;36222 28937;28938 28938 2 79811 0 VADWTGATYQDKR DMPYQPFSKGDRLGKVADWTGATYQDKRYT GKVADWTGATYQDKRYTNKYSSQFGGGSQY K V A K R Y 2 1 0 2 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 1 0 0 13 1 1509.7212 O15371 O15371 42 54 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 8.7469E-17 240 By MS/MS 7 1.41 2 2 2 2 2 10 53318000 53318000 0 14186 185 15009 36223;36224;36225;36226;36227;36228;36229;36230;36231;36232 28939;28940;28941;28942;28943 28940 5 532520 0 VAEDEAEAAAAAK MSLAGAEKNGLVKIKVAEDEAEAAAAAKFT IKVAEDEAEAAAAAKFTGLSKEELLKVAGS K V A A K F 7 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 13 0 1244.5885 P08195 P08195 148 160 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 3.6298E-17 260.98 By MS/MS By matching 6.83 2.54 2 1 2 1 4 2 5452200 5395500 56681 14187 519 15010 36233;36234;36235;36236;36237;36238 28944;28945;28946;28947 28945 4 191440 126020 VAEEHAPSIVFIDEIDAIGTK KYLGDGPKLVRELFRVAEEHAPSIVFIDEI PSIVFIDEIDAIGTKRYDSNSGGEREIQRT R V A T K R 3 0 0 2 0 0 3 1 1 4 0 1 0 1 1 1 1 0 0 2 0 0 21 0 2253.1529 P62191 P62191 273 293 PSMC1 26S protease regulatory subunit 4 yes yes 3 9.4891E-06 172.95 By MS/MS 6 0 1 1 2237100 2237100 0 14188 1141 15011 36239 28948;28949 28948 2 15379 0 VAEEHAPSIVFIDEIDAIGTKR KYLGDGPKLVRELFRVAEEHAPSIVFIDEI SIVFIDEIDAIGTKRYDSNSGGEREIQRTM R V A K R Y 3 1 0 2 0 0 3 1 1 4 0 1 0 1 1 1 1 0 0 2 0 0 22 1 2409.254 P62191 P62191 273 294 PSMC1 26S protease regulatory subunit 4 yes yes 3;4 5.1685E-06 167.97 By MS/MS 6 0 2 2 3971700 3971700 0 14189 1141 15012 36240;36241 28950;28951;28952 28951 3 27302 0 VAEFHTELER QLLGLNLLFLLSQNRVAEFHTELERLPAKD LSQNRVAEFHTELERLPAKDIQTNVYIKHP R V A E R L 1 1 0 0 0 0 3 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1229.6041 P48556 P48556 205 214 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 9.5204E-08 192.91 By MS/MS 8 0 1 1 2977900 2977900 0 14190 937 15013 36242 28953 28953 1 37595 0 VAEFHTELERLPAK QLLGLNLLFLLSQNRVAEFHTELERLPAKD RVAEFHTELERLPAKDIQTNVYIKHPVSLE R V A A K D 2 1 0 0 0 0 3 0 1 0 2 1 0 1 1 0 1 0 0 1 0 0 14 1 1638.873 P48556 P48556 205 218 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 3 0.036598 66.004 By MS/MS 8 0 1 1 2131000 2131000 0 14191 937 15014 36243 28954 28954 1 26904 0 VAEGKQEEIQQK NGAVNEIKDLSDKLKVAEGKQEEIQQKGQA KLKVAEGKQEEIQQKGQAEKKELQHKIDEM K V A Q K G 1 0 0 0 0 3 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 12 1 1385.7151 Q14BN4 Q14BN4 323 334 SLMAP Sarcolemmal membrane-associated protein yes yes 2;3 1.6145E-05 183.85 By MS/MS 4 0 2 2 1767900 1767900 0 14192 1465 15015 36244;36245 28955;28956 28956 2 166370 0 VAEGQVTCPYLPPFPAR AEYLHWLLTNIPGNRVAEGQVTCPYLPPFP EGQVTCPYLPPFPARGSGIHRLAFLLFKQD R V A A R G 2 1 0 0 1 1 1 1 0 0 1 0 0 1 4 0 1 0 1 2 0 0 17 0 1900.9506 Q96DV4 Q96DV4 245 261 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.00057003 164.92 By MS/MS 7.5 0.5 1 1 2 3887700 3887700 0 14193 2138 15016 36246;36247 28957;28958 28957 2 60587 0 VAEIEHAEK IKIFGSRVRVDSTAKVAEIEHAEKEKMKEK VDSTAKVAEIEHAEKEKMKEKVERILKHGI K V A E K E 2 0 0 0 0 0 3 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1024.5189 P78371 P78371 264 272 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0016968 125.16 By MS/MS 6 0 1 1 3235600 3235600 0 14194 1222 15017 36248 28959 28959 1 22242 0 VAEIEHAEKEK IKIFGSRVRVDSTAKVAEIEHAEKEKMKEK STAKVAEIEHAEKEKMKEKVERILKHGINC K V A E K M 2 0 0 0 0 0 4 0 1 1 0 2 0 0 0 0 0 0 0 1 0 0 11 1 1281.6565 P78371 P78371 264 274 CCT2 T-complex protein 1 subunit beta yes yes 2 8.0332E-06 160.53 By MS/MS 6.5 0.5 1 1 2 31012000 31012000 0 14195 1222 15018 36249;36250 28960;28961 28960 2 224740 0 VAEITELILK LKDQVLRCSKIAGVKVAEITELILKALEND IAGVKVAEITELILKALENDQKVRKEGGKF K V A L K A 1 0 0 0 0 0 2 0 0 2 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1127.6802 Q06265 Q06265 258 267 EXOSC9 Exosome complex component RRP45 yes yes 2 7.5662E-05 155.58 By MS/MS 6 0.816 1 1 1 3 1206700 1206700 0 14196 1296 15019 36251;36252;36253 28962;28963 28962 2 11946 0 VAEQTPLSALYLASLIK KLAPALATGNTVVMKVAEQTPLSALYLASL EQTPLSALYLASLIKEAGFPPGVVNIITGY K V A I K E 3 0 0 0 0 1 1 0 0 1 4 1 0 0 1 2 1 0 1 1 0 0 17 0 1816.0346 P30837 P30837 210 226 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.00030471 172.85 By MS/MS 6 0 1 1 160550 160550 0 14197 780 15020 36254 28964;28965 28965 2 1103.7 0 VAEQTPLTALYVANLIK KLGPALATGNVVVMKVAEQTPLTALYVANL EQTPLTALYVANLIKEAGFPPGVVNIVPGF K V A I K E 3 0 1 0 0 1 1 0 0 1 3 1 0 0 1 0 2 0 1 2 0 0 17 0 1843.0455 P05091 P05091 210 226 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00055802 159.5 By MS/MS 6 0 1 1 866960 866960 0 14198 485 15021 36255 28966 28966 1 5959.7 0 VAEQVLNAVNK SMSLLEDKGLAEVSKVAEQVLNAVNKGLYR EVSKVAEQVLNAVNKGLYREATELWGKAEM K V A N K G 2 0 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 11 0 1183.6561 Q9HB40 Q9HB40 233 243 SCPEP1 Retinoid-inducible serine carboxypeptidase yes yes 2 0.000349 134.57 By MS/MS 8 0 1 1 616480 616480 0 14199 2500 15022 36256 28967 28967 1 7783 0 VAFITGGGTGLGK PLQKAMLPPNSFQGKVAFITGGGTGLGKGM GKVAFITGGGTGLGKGMTTLLSSLGAQCVI K V A G K G 1 0 0 0 0 0 0 5 0 1 1 1 0 1 0 0 2 0 0 1 0 0 13 0 1176.6503 Q16698 Q16698 61 73 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 2 0.0076929 119.27 By MS/MS 8 0 2 2 0 0 0 14200 1557 15023 36257;36258 28968;28969 28968 2 0 0 VAFSVAR GLRKVACIGAWHPARVAFSVARAGQKGYHH IGAWHPARVAFSVARAGQKGYHHRTEINKK R V A A R A 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 7 0 748.42317 P39023 P39023 262 268 RPL3 60S ribosomal protein L3 yes yes 2 0.0068004 148.21 By MS/MS 3.25 2.28 1 1 1 1 4 2849300 2849300 0 14201 854 15024 36259;36260;36261;36262 28970;28971 28971 2 107790 0 VAGALLR GDLTNLLQNQAVKGKVAGALLRAIFKGSPC QNQAVKGKVAGALLRAIFKGSPCSEEAGTL K V A L R A 2 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 698.44391 Q9NVI1 Q9NVI1 42 48 FANCI Fanconi anemia group I protein yes yes 2 0.029073 105.42 By MS/MS 3 0 1 1 278130 278130 0 14202 2597 15025 36263 28972 28972 1 5089 0 VAGALVQNTEK CAGGPRKGYMGHLTRVAGALVQNTEKGPNA HLTRVAGALVQNTEKGPNAEQLRQLLKELP R V A E K G 2 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1128.6139 Q9UPN7 Q9UPN7 470 480 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 0.03337 78.655 By MS/MS 4 0.816 1 1 1 3 681620 681620 0 14203 2799 15026 36264;36265;36266 28973 28973 1 31206 0 VAGALVQNTEKGPNAEQLR CAGGPRKGYMGHLTRVAGALVQNTEKGPNA LVQNTEKGPNAEQLRQLLKELPSEQQEQWE R V A L R Q 3 1 2 0 0 2 2 2 0 0 2 1 0 0 1 0 1 0 0 2 0 0 19 1 1994.0545 Q9UPN7 Q9UPN7 470 488 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 3 0.015493 69.379 By MS/MS 4 0.816 1 1 1 3 2548600 2548600 0 14204 2799 15027 36267;36268;36269 28974;28975 28975 2 162050 0 VAGDCLDEK WLDLKDNPLDPVLAKVAGDCLDEKQCKQCA DPVLAKVAGDCLDEKQCKQCANKVLQHMKA K V A E K Q 1 0 0 2 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1005.4437 Q96AG4 Q96AG4 127 135 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.0017819 124.08 By MS/MS 6.5 0.5 1 1 2 5042200 5042200 0 14205 2107 15028 36270;36271 28976 28976 1 70123 0 VAGDCLDEKQCK WLDLKDNPLDPVLAKVAGDCLDEKQCKQCA LAKVAGDCLDEKQCKQCANKVLQHMKAVQA K V A C K Q 1 0 0 2 2 1 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 12 1 1421.6279 Q96AG4 Q96AG4 127 138 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 1.0374E-11 228.98 By MS/MS 7.5 0.5 1 1 2 1931600 1931600 0 14206 2107 15029 36272;36273 28977 28977 1 29551 0 VAGIFPR KITKVMDVRLDREHRVAGIFPRLSFKDKST VRLDREHRVAGIFPRLSFKDKSTYIESSTK R V A P R L 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 7 0 758.44391 O96005 O96005 448 454 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 0.023145 109.88 By MS/MS 2.5 1.12 1 1 1 1 4 1044800 1044800 0 14207 437 15030 36274;36275;36276;36277 28978;28979 28978 2 186450 0 VAGIHKK TKVRAGRGFSLEELRVAGIHKKVARTIGIS GFSLEELRVAGIHKKVARTIGISVDPRRRN R V A K K V 1 0 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 0 0 1 0 0 7 1 751.47046 P26373 P26373 83 89 RPL13 60S ribosomal protein L13 yes yes 2 0.051215 122.5 By MS/MS 8 0 1 1 860100 860100 0 14208 731 15031 36278 28980 28980 1 10859 0 VAGLLTQK VSSCQEKREPQGFHKVAGLLTQKLTYENGL EPQGFHKVAGLLTQKLTYENGLLKMNFTGG K V A Q K L 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 8 0 828.5069 P11717 P11717 1294 1301 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.032104 89.296 By MS/MS 2 0.816 1 1 1 3 458370 458370 0 14209 583 15032 36279;36280;36281 28981 28981 1 109130 0 VAGMDVELTVEER EQAERYDEMVESMKKVAGMDVELTVEERNL KKVAGMDVELTVEERNLLSVAYKNVIGARR K V A E R N 1 1 0 1 0 0 3 1 0 0 1 0 1 0 0 0 1 0 0 3 0 0 13 0 1446.7024 P62258 P62258 30 42 YWHAE 14-3-3 protein epsilon yes yes 2 0.00016225 166.29 By MS/MS 8 0 1 1 960000 960000 0 14210 1146 15033 36282 28982 28982 651 1 12120 0 VAGQDGSVVQFK TEEVKTENNNHINLKVAGQDGSVVQFKIKR NLKVAGQDGSVVQFKIKRQTPLSKLMKAYC K V A F K I 1 0 0 1 0 2 0 2 0 0 0 1 0 1 0 1 0 0 0 3 0 0 12 0 1233.6354 Q6EEV6;P61956;P55854 Q6EEV6 22 33 SUMO4;SUMO2;SUMO3 Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 2 7.7195E-07 181.87 By MS/MS 5.25 3.77 1 1 2 4 828590 828590 0 14211 1064 15034 36283;36284;36285;36286 28983;28984;28985;28986 28985 4 280260 0 VAGSPGWVR AAAKFTGLSKEELLKVAGSPGWVRTRWALL KEELLKVAGSPGWVRTRWALLLLFWLGWLG K V A V R T 1 1 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 1 0 2 0 0 9 0 927.49265 P08195 P08195 172 180 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0093421 101.6 By MS/MS 5.5 0.5 1 1 2 3886400 3886400 0 14212 519 15035 36287;36288 28987 28987 1 32504 0 VAGSVTELIQAAEAMK PSPELKQQLTGHSKRVAGSVTELIQAAEAM AGSVTELIQAAEAMKGTEWVDPEDPTVIAE R V A M K G 4 0 0 0 0 1 2 1 0 1 1 1 1 0 0 1 1 0 0 2 0 0 16 0 1616.8444 Q9Y490 Q9Y490 2276 2291 TLN1 Talin-1 yes yes 2 3.4433E-05 197.36 By MS/MS 2 0 1 1 195590 195590 0 14213 2888 15036 36289 28988;28989 28988 1201 2 66157 0 VAGTQACATETIDTSR GHWANQLAAVAAGARVAGTQACATETIDTS AGTQACATETIDTSRVSLRAPQEFMTSHSE R V A S R V 3 1 0 1 1 1 1 1 0 1 0 0 0 0 0 1 4 0 0 1 0 0 16 0 1679.7785 Q9BRR6 Q9BRR6 409 424 ADPGK ADP-dependent glucokinase yes yes 2 3.9776E-24 283.05 By MS/MS 6 0 1 1 899540 899540 0 14214 2298 15037 36290 28990 28990 1 6183.6 0 VAGYAALLEQYQK KGEESNSSANKCLLKVAGYAALLEQYQKAI LKVAGYAALLEQYQKAIDIYEQVGTNAMDS K V A Q K A 3 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 2 1 0 0 13 0 1452.7613 P54920 P54920 168 180 NAPA Alpha-soluble NSF attachment protein yes yes 2 0.00019055 163.84 By MS/MS 7.5 0.5 1 1 2 3228500 3228500 0 14215 1049 15038 36291;36292 28991 28991 1 41135 0 VAHATAAEK REKRRKAREETQGLKVAHATAAEKEECPSS ETQGLKVAHATAAEKEECPSSSPVLGDTPT K V A E K E 4 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 896.47158 P43366 P43366 27 35 MAGEB1 Melanoma-associated antigen B1 yes yes 2 0.031966 83.753 By MS/MS 6 2.58 1 1 1 1 1 1 1 1 1 9 9655800 9655800 0 14216 897 15039 36293;36294;36295;36296;36297;36298;36299;36300;36301 28992 28992 1 106560 0 VAHEHKEK PQKPALIPQPTFTEKVAHEHKEKKYEMDFG QPTFTEKVAHEHKEKKYEMDFGIWKGHLDA K V A E K K 1 0 0 0 0 0 2 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 8 1 976.50903 P57740 P57740 786 793 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.012267 138.54 By MS/MS 4.5 0.5 1 1 2 88433 88433 0 14217 1082 15040 36302;36303 28993 28993 1 7353.5 0 VAHSDKPGSTSTASFR EENRHLRDEGLRLRKVAHSDKPGSTSTASF AHSDKPGSTSTASFRDNVTSPLPSLLVVIA K V A F R D 2 1 0 1 0 0 0 1 1 0 0 1 0 1 1 4 2 0 0 1 0 0 16 1 1646.8012 Q9P0L0 Q9P0L0 206 221 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.0092893 86.539 By MS/MS 8.5 1.12 1 1 1 1 4 10117000 10117000 0 14218 2665 15041 36304;36305;36306;36307 28994;28995 28994 2 149620 0 VAIEHLDK IHPIRIADGYEQAARVAIEHLDKISDSVLV GYEQAARVAIEHLDKISDSVLVDIKDTEPL R V A D K I 1 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 923.50763 P48643 P48643 143 150 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00018513 171.38 By MS/MS By matching 6 0 4 2 2 7816200 7705200 110930 14219 940 15042 36308;36309;36310;36311 28996;28997 28996 2 52968 113670 VAIKDKQEGIE TDLISELSLLEERFRVAIKDKQEGIE____ ERFRVAIKDKQEGIE_______________ R V A I E - 1 0 0 1 0 1 2 1 0 2 0 2 0 0 0 0 0 0 0 1 0 0 11 2 1228.6663 P52435 P52435 107 117 POLR2J DNA-directed RNA polymerase II subunit RPB11-a yes yes 2 0.010009 115.23 By MS/MS 10 0 1 1 303700 303700 0 14220 1017 15043 36312 28998 28998 1 16368 0 VAISNPPQR VMKMDGMTIKENIIKVAISNPPQRKVPEKP KENIIKVAISNPPQRKVPEKPETRKAPGGP K V A Q R K 1 1 1 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 980.54033 Q15020 Q15020 873 881 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2 0.0019309 122.19 By MS/MS 3 0 1 1 980820 980820 0 14221 1473 15044 36313 28999 28999 1 17946 0 VALDLDPYVK DNLATELCRINEDQKVALDLDPYVKKLLNA NEDQKVALDLDPYVKKLLNARRRVVLVNNI K V A V K K 1 0 0 2 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1131.6176 O95295 O95295 74 83 SNAPIN SNARE-associated protein Snapin yes yes 2 0.0070914 103.55 By MS/MS 10 0 1 1 163480 163480 0 14222 402 15045 36314 29000 29000 1 8811.2 0 VALDMTTLTIMR CRRQLDKSKLKPGTRVALDMTTLTIMRYLP GTRVALDMTTLTIMRYLPREVDPLVYNMSH R V A M R Y 1 1 0 1 0 0 0 0 0 1 2 0 2 0 0 0 3 0 0 1 0 0 12 0 1363.7203 P62333 P62333 98 109 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.00014867 143.4 By MS/MS 7 0 2 2 2312500 2312500 0 14223 1159 15046;15047 36315;36316 29001;29002 29001 663;664 2 36303 0 VALEFGSEEPR RGNQSGRSPNNPFSRVALEFGSEEPRHSEA PFSRVALEFGSEEPRHSEAADSPRSSTVHI R V A P R H 1 1 0 0 0 0 3 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 11 0 1232.6037 Q9UNY4 Q9UNY4 891 901 TTF2 Transcription termination factor 2 yes yes 2 2.2865E-05 156.83 By MS/MS 3.5 0.5 1 1 2 1217500 1217500 0 14224 2795 15048 36317;36318 29003 29003 1 52814 0 VALEIFQHSK IYKDLPFETLEVEAKVALEIFQHSKYKVDF EVEAKVALEIFQHSKYKVDFIEEKASQNPE K V A S K Y 1 0 0 0 0 1 1 0 1 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1170.6397 Q9NYK5 Q9NYK5 225 234 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.00026107 142.98 By MS/MS 8 0.816 1 1 1 3 6204000 6204000 0 14225 2635 15049 36319;36320;36321 29004;29005 29005 2 88878 0 VALENDDRSEEEKYTAVQR QLAEEIESSAQYKARVALENDDRSEEEKYT NDDRSEEEKYTAVQRNSSEREGHSINTREN R V A Q R N 2 2 1 2 0 1 4 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 19 2 2251.0717 Q99700 Q99700 458 476 ATXN2 Ataxin-2 yes yes 3 8.5448E-05 143.88 By MS/MS 3 0 1 1 472620 472620 0 14226 2258 15050 36322 29006 29006 1 8647.6 0 VALILQNVDLPN HNGRPYSLLVYIPSRVALILQNVDLPN___ PSRVALILQNVDLPN_______________ R V A P N - 1 0 2 1 0 1 0 0 0 1 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1307.7449 Q04446 Q04446 691 702 GBE1 1,4-alpha-glucan-branching enzyme yes yes 2 0.00017613 152.04 By MS/MS 5 0 1 1 379980 379980 0 14227 1290 15051 36323 29007 29007 1 3811 0 VALLCGPPGLGK MLEAGLDPSQRPKQKVALLCGPPGLGKTTL KQKVALLCGPPGLGKTTLAHVIARHAGYSV K V A G K T 1 0 0 0 1 0 0 3 0 0 3 1 0 0 2 0 0 0 0 1 0 0 12 0 1180.6638 Q8WVB6 Q8WVB6 369 380 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.0012531 122.18 By MS/MS 3 0 1 1 228700 228700 0 14228 2022 15052 36324 29008 29008 1 4184.6 0 VALLDFGATR DPNWSNFFYDPQQHKVALLDFGATREYDRS PQQHKVALLDFGATREYDRSFTDLYIQIIR K V A T R E 2 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1061.5869 Q8NI60 Q8NI60 503 512 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 0.00029837 140.45 By MS/MS 8 1.41 1 1 1 1 1 5 3883800 3883800 0 14229 1972 15053 36325;36326;36327;36328;36329 29009;29010;29011 29009 3 37891 0 VALLDVFR SQKVELSESRLKAFKVALLDVFREAHAQSI SRLKAFKVALLDVFREAHAQSIGMNRLTES K V A F R E 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 2 0 0 8 0 931.5491 P25205 P25205 749 756 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0096211 109.01 By MS/MS 4 0 1 1 548180 548180 0 14230 719 15054 36330 29012 29012 1 51588 0 VALLLLEK RTVALLTEKKADVEKVALLLLEKEVLDKND KKADVEKVALLLLEKEVLDKNDMVELLGPR K V A E K E 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 8 0 897.5899 Q9Y4W6;Q01484 Q9Y4W6 726 733 AFG3L2;ANK2 AFG3-like protein 2;Ankyrin-2 yes no 2 0.018484 101.33 By MS/MS 5 0 1 1 616650 616650 0 14231 2902 15055 36331 29013 29013 1 6184.7 0 VALQDLQTNSK QVTRAVLGDDPQLMKVALQDLQTNSKIGAL QLMKVALQDLQTNSKIGALLPYFVYVVSGV K V A S K I 1 0 1 1 0 2 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1215.6459 Q9Y6J9 Q9Y6J9 178 188 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 2 0.0045393 105.13 By MS/MS 5 0 1 1 836510 836510 0 14232 2946 15056 36332 29014 29014 1 8389.8 0 VALRGEDVPLTEQTVSQVLQSAK GGVILESDPQQVVHRVALRGEDVPLTEQTV PLTEQTVSQVLQSAKEQIKWSLLR______ R V A A K E 2 1 0 1 0 3 2 1 0 0 3 1 0 0 1 2 2 0 0 4 0 0 23 1 2467.3282 P61923 P61923 146 168 COPZ1 Coatomer subunit zeta-1 yes yes 3 3.3142E-07 156.74 By MS/MS 9 0 1 1 391050 391050 0 14233 1131 15057 36333 29015;29016 29015 2 7695.9 0 VALRNDSYTLHK VDKNIDINDVTPNCRVALRNDSYTLHKILP NCRVALRNDSYTLHKILPNKVDPLVSLMMV R V A H K I 1 1 1 1 0 0 0 0 1 0 2 1 0 0 0 1 1 0 1 1 0 0 12 1 1415.7521 P62195 P62195 114 125 PSMC5 26S protease regulatory subunit 8 yes yes 3;4 0.04595 96.756 By MS/MS 7 0.707 1 2 1 4 4913600 4913600 0 14234 1142 15058 36334;36335;36336;36337 29017;29018 29018 2 71938 0 VALSEPQPER AEIISLCKRYPGFMRVALSEPQPERRFFRR PGFMRVALSEPQPERRFFRRGWVTFDRSVN R V A E R R 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1124.5826 Q9BXP5 Q9BXP5 450 459 SRRT Serrate RNA effector molecule homolog yes yes 2 0.0074741 100.02 By MS/MS 3.5 0.5 1 1 2 787040 787040 0 14235 2358 15059 36338;36339 29019 29019 1 46842 0 VALSPAGVQNLVK LTVGVPKEIFQNEKRVALSPAGVQNLVKQG KRVALSPAGVQNLVKQGFNVVVESGAGEAS R V A V K Q 2 0 1 0 0 1 0 1 0 0 2 1 0 0 1 1 0 0 0 3 0 0 13 0 1294.7609 Q13423 Q13423 72 84 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.012858 90.653 By MS/MS 1 0 1 1 0 0 0 14236 1381 15060 36340 29020 29020 1 0 0 VALTGLTVAEYFR LVYGQMNEPPGARARVALTGLTVAEYFRDQ ARVALTGLTVAEYFRDQEGQDVLLFIDNIF R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.7068E-09 261.87 By MS/MS 6.5 0.5 1 1 2 2314300 2314300 0 14237 497 15061 36341;36342 29021;29022 29021 2 16866 0 VALVNDSLSDVTSTTSSR DVQATGRIADDADPRVALVNDSLSDVTSTT VNDSLSDVTSTTSSRVDDHDSEEICLDHLC R V A S R V 1 1 1 2 0 0 0 0 0 0 2 0 0 0 0 5 3 0 0 3 0 0 18 0 1850.9222 Q7Z2W4 Q7Z2W4 486 503 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 5.1129E-25 326.57 By MS/MS 5.5 1.12 1 1 1 1 4 13944000 13944000 0 14238 1778 15062 36343;36344;36345;36346 29023;29024 29024 2 969570 0 VALVYGQMNEPPGAR MIESGVINLKDATSKVALVYGQMNEPPGAR VALVYGQMNEPPGARARVALTGLTVAEYFR K V A A R A 2 1 1 0 0 1 1 2 0 0 1 0 1 0 2 0 0 0 1 2 0 0 15 0 1600.8032 P06576 P06576 265 279 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 6.5251E-11 232.17 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 36204000 35929000 275270 14239 497 15063;15064 36347;36348;36349;36350;36351 29025;29026;29027;29028;29029;29030 29030 204 6 279950 282080 VANASYYR RLYLVSDVLYNSSAKVANASYYRKFFETKL LYNSSAKVANASYYRKFFETKLCQIFSDLN K V A Y R K 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 0 0 8 0 942.45593 O15042 O15042 609 616 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2 0.037059 98.458 By MS/MS 2 0 1 1 0 0 0 14240 156 15065 36352 29031 29031 1 0 0 VANCQTVR IYQVQIAGNGQTYIRVANCQTVRMKEEKEV NGQTYIRVANCQTVRMKEEKEVLEHFAGVF R V A V R M 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 8 0 946.46545 Q9Y4A5 Q9Y4A5 617 624 TRRAP Transformation/transcription domain-associated protein yes yes 2 0.024748 104.06 By MS/MS 1 0 1 1 0 0 0 14241 2890 15066 36353 29032 29032 1 0 0 VANEAEFILSR EGRLLSQTMKDHLVRVANEAEFILSRQRAE HLVRVANEAEFILSRQRAEDIHRHAEFESL R V A S R Q 2 1 1 0 0 0 2 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 11 0 1247.651 P50851 P50851 1895 1905 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 2 0.0012433 116.74 By MS/MS 1 0 1 1 126690 126690 0 14242 981 15067 36354 29033;29034 29033 2 30528 0 VANIICTQPR PQFILDDSLNGPPEKVANIICTQPRRISAI GPPEKVANIICTQPRRISAISVAERVAKER K V A P R R 1 1 1 0 1 1 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 10 0 1170.6179 Q6P158 Q6P158 593 602 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.00022773 145.25 By MS/MS 3.5 0.5 1 1 2 1193500 1193500 0 14243 1697 15068 36355;36356 29035 29035 1 44806 0 VANPSGNLTETYVQDR ARALTQTGGPHVKARVANPSGNLTETYVQD ANPSGNLTETYVQDRGDGMYKVEYTPYEEG R V A D R G 1 1 2 1 0 1 1 1 0 0 1 0 0 0 1 1 2 0 1 2 0 0 16 0 1762.8486 P21333 P21333 1297 1312 FLNA Filamin-A yes yes 2 1.4423E-24 293.53 By MS/MS By MS/MS 2.4 1.02 1 2 1 1 4 1 8096000 7963600 132410 14244 677 15069 36357;36358;36359;36360;36361 29036;29037;29038;29039;29040 29039 5 2056400 187250 VANVELYYR TDAWKEGQFKDIITKVANVELYYRAIQFYL KDIITKVANVELYYRAIQFYLEFKPLLLND K V A Y R A 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 2 0 0 9 0 1125.5819 Q00610 Q00610 1398 1406 CLTC Clathrin heavy chain 1 yes yes 2 0.0024352 115.71 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 4218900 4218900 0 14245 1262 15070 36362;36363;36364;36365;36366;36367 29041;29042;29043 29041 3 331320 0 VANVSLLALYK HAVGDIPGVRFKVVKVANVSLLALYKGKKE KVVKVANVSLLALYKGKKERPRS_______ K V A Y K G 2 0 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 2 0 0 11 0 1189.7071 P62266 P62266 125 135 RPS23 40S ribosomal protein S23 yes yes 2 3.5835E-09 210.64 By MS/MS By matching 9.33 0.471 2 1 2 1 21143000 21118000 24990 14246 1148 15071 36368;36369;36370 29044;29045;29046;29047 29044 4 745930 56985 VAPAPARPSGPSK AAMITETIIETDKPKVAPAPARPSGPSKAL PKVAPAPARPSGPSKALKLGAKGKEVDNFV K V A S K A 3 1 0 0 0 0 0 1 0 0 0 1 0 0 4 2 0 0 0 1 0 0 13 1 1233.683 P48444 P48444 212 224 ARCN1 Coatomer subunit delta yes yes 2 0.0058888 110.93 By MS/MS 6.5 0.5 1 1 2 5475400 5475400 0 14247 934 15072 36371;36372 29048 29048 1 39322 0 VAPAQPSEEGPGR SSDTEQQSPTSGGGKVAPAQPSEEGPGRKD GKVAPAQPSEEGPGRKDENKVDGMNAPKGQ K V A G R K 2 1 0 0 0 1 2 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1293.6313 P23588 P23588 512 524 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0011902 122.69 By MS/MS By MS/MS 6.29 1.67 1 2 1 1 1 1 5 2 19153000 18212000 941080 14248 708 15073 36373;36374;36375;36376;36377;36378;36379 29049;29050;29051;29052;29053 29050 5 191750 832890 VAPAQPSEEGPGRK SSDTEQQSPTSGGGKVAPAQPSEEGPGRKD KVAPAQPSEEGPGRKDENKVDGMNAPKGQT K V A R K D 2 1 0 0 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 14 1 1421.7263 P23588 P23588 512 525 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.004595 119.03 By MS/MS By matching 5 0 2 1 1 520610 498330 22280 14249 708 15074 36380;36381 29054 29054 1 4998 18710 VAPDEHPILLTEAPLNPK DMEKIWYHTFYNELRVAPDEHPILLTEAPL DEHPILLTEAPLNPKINREKMTQIMFEAFN R V A P K I 2 0 1 1 0 0 2 0 1 1 3 1 0 0 4 0 1 0 0 1 0 0 18 0 1953.0571 Q562R1 Q562R1 97 114 ACTBL2 Beta-actin-like protein 2 yes yes 3 0.028001 75.998 By MS/MS 7 0 1 1 906920 0 906920 14250 1594 15075 36382 29055;29056 29055 2 0 1633300 VAPEEHPVLLTEAPLNPK DMEKIWHHTFYNELRVAPEEHPVLLTEAPL EEHPVLLTEAPLNPKANREKMTQIMFETFN R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P60709;P63261 P63261 96 113 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 7.5194E-06 220.37 By MS/MS By MS/MS 6.57 2.5 1 1 1 1 1 4 2 1 2 10 4 137420000 136100000 1322900 14251 1095;1203 15076 36383;36384;36385;36386;36387;36388;36389;36390;36391;36392;36393;36394;36395;36396 29057;29058;29059;29060;29061;29062;29063;29064 29061 8 2146100 1986700 VAPGFQFFATR ENGELLIPGRGDCLKVAPGFQFFATRRLLS DCLKVAPGFQFFATRRLLSCGGNWYRPLNS K V A T R R 2 1 0 0 0 1 0 1 0 0 0 0 0 3 1 0 1 0 0 1 0 0 11 0 1239.64 Q9NU22 Q9NU22 434 444 MDN1 Midasin yes yes 2 0.03077 78.098 By MS/MS 1.5 0.5 1 1 2 155630 155630 0 14252 2580 15077 36397;36398 29065 29065 1 47550 0 VAPHALSEEEKTTLR AVLYFKHGIDRYWRRVAPHALSEEEKTTLR VAPHALSEEEKTTLRAGLITNFNEPINQIA R V A L R A 2 1 0 0 0 0 3 0 1 0 2 1 0 0 1 1 2 0 0 1 0 0 15 1 1679.8842 Q9UI26 Q9UI26 77 91 IPO11 Importin-11 yes yes 3 0.014742 81.632 By MS/MS 4 0 1 1 747600 747600 0 14253 2736 15078 36399 29066 29066 1 70354 0 VAPPGLTQIPQIQK MLLTISEFKPTYQDRVAPPGLTQIPQIQKT RVAPPGLTQIPQIQKTEISFRPNDPKSYEA R V A Q K T 1 0 0 0 0 3 0 1 0 2 1 1 0 0 3 0 1 0 0 1 0 0 14 0 1488.8664 P05026 P05026 72 85 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 2 0.0079649 104.79 By MS/MS 6.5 0.5 1 1 2 7054900 7054900 0 14254 482 15079 36400;36401 29067;29068 29067 2 60661 0 VAQDLCK GGEVSCLVAGTKCDKVAQDLCKVAGIAKVL VAGTKCDKVAQDLCKVAGIAKVLVAQHDVY K V A C K V 1 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 832.41129 P13804 P13804 63 69 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.035286 100.74 By MS/MS 8 0 1 1 586000 586000 0 14255 606 15080 36402 29069 29069 1 7398.2 0 VAQEQGGHPK ECWFPKATDKSFVEKVAQEQGGHPKFQRPR SFVEKVAQEQGGHPKFQRPRHLRDQADFSV K V A P K F 1 0 0 0 0 2 1 2 1 0 0 1 0 0 1 0 0 0 0 1 0 0 10 0 1049.5254 Q7Z406 Q7Z406 572 581 MYH14 Myosin-14 yes yes 2 0.04592 74.301 By MS/MS 2 0 1 1 51664 51664 0 14256 1788 15081 36403 29070 29070 1 17475 0 VAQFLVIYAPR KADFSPFGNSQGPSRVAQFLVIYAPRRGIL GPSRVAQFLVIYAPRRGILEVWSTQQGPRV R V A P R R 2 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 11 0 1275.7339 Q9H2M9 Q9H2M9 461 471 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.0049632 104.01 By MS/MS 3 0 1 1 31327 31327 0 14257 2431 15082 36404 29071 29071 1 573.2 0 VAQGVSGAVQDK LSSQNRYFSEADKIKVAQGVSGAVQDKGSI KIKVAQGVSGAVQDKGSIHKFVPYLIAGIQ K V A D K G 2 0 0 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 12 0 1157.6041 P12268 P12268 439 450 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.0012756 120.03 By MS/MS By matching 6 0 2 1 1 5587400 5538400 48981 14258 590 15083 36405;36406 29072 29072 1 38072 50191 VAQILKEPK SKQNKLEQVEKELLRVAQILKEPKVAASVL EKELLRVAQILKEPKVAASVLNPYVKRSIK R V A P K V 1 0 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 9 1 1024.6281 P48047 P48047 65 73 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 0.0010199 143.7 By MS/MS By matching 9 0.707 2 4 2 6 2 32653000 32592000 60777 14259 932 15084 36407;36408;36409;36410;36411;36412;36413;36414 29073;29074;29075;29076 29076 4 631400 138590 VAQIQNAGLGEFR AEKWRRQIIGEISKKVAQIQNAGLGEFRIR KKVAQIQNAGLGEFRIRDLNDEINKLLREK K V A F R I 2 1 1 0 0 2 1 2 0 1 1 0 0 1 0 0 0 0 0 1 0 0 13 0 1401.7365 Q9ULR0 Q9ULR0 57 69 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 2 0.0037015 121.68 By MS/MS 7 0 1 1 1411500 1411500 0 14260 2773 15085 36415 29077 29077 1 22157 0 VAQKREDAVSK VAFAYKNVKFVLKHKVAQKREDAVSKEVTR LKHKVAQKREDAVSKEVTRKLSEADNRKMS K V A S K E 2 1 0 1 0 1 1 0 0 0 0 2 0 0 0 1 0 0 0 2 0 0 11 2 1229.6728 Q9UNL2 Q9UNL2 88 98 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 0.00017091 161.51 By MS/MS 9 0 2 2 2910600 2910600 0 14261 2790 15086 36416;36417 29078;29079 29079 2 57280 0 VAQLEQVYIR NCQMSNITVTYRDGRVAQLEQVYIRGSKIR YRDGRVAQLEQVYIRGSKIRFLILPDMLKN R V A I R G 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 1 2 0 0 10 0 1217.6768 P62318 P62318 55 64 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 2 6.8637E-08 187.5 By MS/MS By MS/MS 10 0 2 1 1 7229200 7124300 104880 14262 1157 15087 36418;36419 29080;29081 29081 1 383970 134270 VAQLEQVYIRGSK NCQMSNITVTYRDGRVAQLEQVYIRGSKIR GRVAQLEQVYIRGSKIRFLILPDMLKNAPM R V A S K I 1 1 0 0 0 2 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 13 1 1489.8253 P62318 P62318 55 67 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 3 0.053094 61.423 By MS/MS 10 0 1 1 559130 559130 0 14263 1157 15088 36420 29082 29082 1 30135 0 VAQPGPLEPEEPR GQEPLHNEELAGAGRVAQPGPLEPEEPRAG GRVAQPGPLEPEEPRAGGRPRRRRDLGSRL R V A P R A 1 1 0 0 0 1 3 1 0 0 1 0 0 0 4 0 0 0 0 1 0 0 13 0 1417.7201 Q96HY6 Q96HY6 47 59 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 0.02814 64.224 By MS/MS 8.5 1.5 1 1 2 18352000 18352000 0 14264 2169 15089 36421;36422 29083;29084 29084 2 299040 0 VAQPPLSAQATGSGQPTR TSLVSAWNSSSSSKKVAQPPLSAQATGSGQ PPLSAQATGSGQPTRKAGKGSRGGRKGGPP K V A T R K 3 1 0 0 0 3 0 2 0 0 1 0 0 0 3 2 2 0 0 1 0 0 18 0 1764.9119 Q86UK7 Q86UK7 516 533 ZNF598 Zinc finger protein 598 yes yes 2 0.00016661 175.27 By MS/MS 4 0 1 1 876200 876200 0 14265 1821 15090 36423 29085 29085 1 82456 0 VAQPTITDNK KKGEITGEVRMPSGKVAQPTITDNKDGTVT MPSGKVAQPTITDNKDGTVTVRYAPSEAGL K V A N K D 1 0 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 0 0 1 0 0 10 0 1085.5717 P21333 P21333 1815 1824 FLNA Filamin-A yes yes 2 0.029621 93.111 By MS/MS 1.5 0.5 1 1 2 557070 557070 0 14266 677 15091 36424;36425 29086 29086 1 166040 0 VAQPTITDNKDGTVTVR KKGEITGEVRMPSGKVAQPTITDNKDGTVT QPTITDNKDGTVTVRYAPSEAGLHEMDIRY K V A V R Y 1 1 1 2 0 1 0 1 0 1 0 1 0 0 1 0 4 0 0 3 0 0 17 1 1813.9534 P21333 P21333 1815 1831 FLNA Filamin-A yes yes 2 0.00033302 193.51 By MS/MS 1.5 0.5 1 1 2 621990 621990 0 14267 677 15092 36426;36427 29087 29087 1 199790 0 VAQVAEITYGQK EAETERKKALIEAEKVAQVAEITYGQKVME AEKVAQVAEITYGQKVMEKETEKKISEIED K V A Q K V 2 0 0 0 0 2 1 1 0 1 0 1 0 0 0 0 1 0 1 2 0 0 12 0 1305.6929 O94905 O94905 221 232 ERLIN2 Erlin-2 yes yes 2 0.00091972 126.66 By MS/MS 7 0 1 1 1307200 1307200 0 14268 375 15093 36428 29088 29088 1 20520 0 VAQVLEGFITR QVEVFRRQDAQRGMRVAQVLEGFITRKVVK RGMRVAQVLEGFITRKVVKQTVMTVVYGVT R V A T R K 1 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1231.6925 O00411 O00411 977 987 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00063418 128.88 By MS/MS 4 0.816 1 1 1 3 759930 759930 0 14269 104 15094 36429;36430;36431 29089 29089 1 38761 0 VARPLPAEEPER KDQDEKRRRVTSRERVARPLPAEEPERAKS RERVARPLPAEEPERAKSGTRTEKEEERDE R V A E R A 2 2 0 0 0 0 3 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 12 1 1362.7256 P26358 P26358 213 224 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.047622 101.89 By MS/MS 2.5 0.5 1 1 2 309220 309220 0 14270 730 15095 36432;36433 29090 29090 1 86156 0 VASERDTDIASLQEELKK SARDEILLLHQAAAKVASERDTDIASLQEE ERDTDIASLQEELKKVRAELERWRKAASEY K V A K K V 2 1 0 2 0 1 3 0 0 1 2 2 0 0 0 2 1 0 0 1 0 0 18 2 2031.0484 Q14BN4 Q14BN4 594 611 SLMAP Sarcolemmal membrane-associated protein yes yes 3 0.00016771 142.35 By MS/MS 4 0 1 1 1103800 1103800 0 14271 1465 15096 36434 29091 29091 1 103880 0 VASIETGLAAAAAK PTLPKQDRPVREGTRVASIETGLAAAAAKL RVASIETGLAAAAAKLAQQELQKAQKKKYI R V A A K L 6 0 0 0 0 0 1 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 14 0 1271.7085 Q9UPP1;O75151 Q9UPP1 902 915 PHF8;PHF2 Histone lysine demethylase PHF8;Lysine-specific demethylase PHF2 yes no 2 1.2149E-16 257.72 By MS/MS 3 0 1 1 379890 379890 0 14272 298 15097 36435 29092 29092 1 6950.9 0 VASPDAVTTITSSK VGATFPEGVGQLLNKVASPDAVTTITSSKL KVASPDAVTTITSSKLHCIMPHVKQTFLRL K V A S K L 2 0 0 1 0 0 0 0 0 1 0 1 0 0 1 3 3 0 0 2 0 0 14 0 1375.7195 Q9NUL7 Q9NUL7 344 357 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 3.136E-05 193.62 By MS/MS 6 0 1 1 8125900 8125900 0 14273 2582 15098 36436 29093 29093 1 55859 0 VASQGEVVRK PAGLETPEAKVLFDKVASQGEVVRKLKTEK VLFDKVASQGEVVRKLKTEKAPKDQVDIAV K V A R K L 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 0 3 0 0 10 1 1071.6037 P07814 P07814 908 917 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00080921 144.65 By MS/MS 3.5 0.5 1 1 2 1031000 1031000 0 14274 512 15099 36437;36438 29094 29094 1 36649 0 VATAQDDITGDGTTSNVLIIGELLK HEMQIQHPTASLIAKVATAQDDITGDGTTS DGTTSNVLIIGELLKQADLYISEGLHPRII K V A L K Q 2 0 1 3 0 1 1 3 0 3 3 1 0 0 0 1 4 0 0 2 0 0 25 0 2543.333 P40227 P40227 80 104 CCT6A T-complex protein 1 subunit zeta yes yes 3 3.2332E-09 184.57 By MS/MS 6 0 1 1 831420 831420 0 14275 858 15100 36439 29095;29096 29096 2 5715.4 0 VATLNSEEESDPPTYK SFAEHRSGLVPQQIKVATLNSEEESDPPTY ATLNSEEESDPPTYKDAFPPLPEKAACLES K V A Y K D 1 0 1 1 0 0 3 0 0 0 1 1 0 0 2 2 2 0 1 1 0 0 16 0 1778.821 Q00341 Q00341 26 41 HDLBP Vigilin yes yes 2 5.928E-33 298.91 By MS/MS 3 0 1 1 550990 550990 0 14276 1260 15101 36440 29097 29097 1 10082 0 VATNPSFDGR FSNLGCFLLPHPGLKVATNPSFDGRLKDID HPGLKVATNPSFDGRLKDIDEDFKRELRNL K V A G R L 1 1 1 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 Q8NHH9 Q8NHH9 303 312 ATL2 Atlastin-2 yes yes 2 0.050182 72.243 By MS/MS 6 0 1 1 1693800 1693800 0 14277 1968 15102 36441 29098 29098 1 11644 0 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 1;2 7.9668E-09 191.63 By MS/MS By MS/MS 5.47 2.91 2 6 2 7 3 2 3 2 5 4 13 23 10760000000 5509000000 5251000000 + 14278 37 15103 36442;36443;36444;36445;36446;36447;36448;36449;36450;36451;36452;36453;36454;36455;36456;36457;36458;36459;36460;36461;36462;36463;36464;36465;36466;36467;36468;36469;36470;36471;36472;36473;36474;36475;36476;36477 29099;29100;29101;29102;29103;29104;29105;29106;29107;29108;29109;29110;29111;29112;29113;29114;29115;29116;29117;29118;29119;29120;29121;29122;29123;29124;29125;29126;29127;29128;29129;29130;29131;29132;29133;29134;29135;29136;29137;29138;29139;29140;29141;29142;29143;29144;29145;29146;29147;29148;29149;29150;29151;29152;29153;29154;29155;29156;29157;29158;29159;29160;29161;29162;29163;29164;29165;29166;29167;29168;29169;29170;29171;29172;29173;29174;29175;29176;29177;29178;29179;29180;29181;29182;29183;29184;29185;29186;29187;29188;29189;29190 29105 91 580660000 6215500000 VATWFNQPAR GMVLKPHFHKDWQRRVATWFNQPARKIRRR DWQRRVATWFNQPARKIRRRKARQAKARRI R V A A R K 2 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 10 0 1188.604 P26373 P26373 22 31 RPL13 60S ribosomal protein L13 yes yes 2 0.00058636 131.62 By MS/MS 8 0 1 1 3734700 3734700 0 14279 731 15104 36478 29191 29191 1 47150 0 VAVATILEK LIKIFLLECNVREVRVAVATILEKTLDSAL NVREVRVAVATILEKTLDSALFYQDKLKSL R V A E K T 2 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 9 0 942.57498 Q9UPU5 Q9UPU5 2236 2244 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.029678 84.743 By MS/MS 2.5 0.5 1 1 2 784550 784550 0 14280 2802 15105 36479;36480 29192 29192 1 192430 0 VAVEAKNPADLPK HNMRVMKFSVSPVVRVAVEAKNPADLPKLV VRVAVEAKNPADLPKLVEGLKRLAKSDPMV R V A P K L 3 0 1 1 0 0 1 0 0 0 1 2 0 0 2 0 0 0 0 2 0 0 13 1 1350.7507 P13639 P13639 507 519 EEF2 Elongation factor 2 yes yes 2;3 0.0008565 119.74 By MS/MS 5.29 1.03 2 2 2 1 7 12792000 12792000 0 14281 602 15106 36481;36482;36483;36484;36485;36486;36487 29193;29194;29195 29194 3 826660 0 VAVEYLDPSPEVQK FPNKQGYVLSSIEGRVAVEYLDPSPEVQKK RVAVEYLDPSPEVQKKKYAFKCHRLKENNI R V A Q K K 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 1 0 0 1 3 0 0 14 0 1572.8035 O43684 O43684 203 216 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 4.2035E-05 190.26 By MS/MS 7.5 0.5 1 1 2 4126500 4126500 0 14282 228 15107 36488;36489 29196 29196 1 61228 0 VAVFTENASEVK SVLSLPYPFASEINKVAVFTENASEVKIAE INKVAVFTENASEVKIAEENGAAFAGGTSL K V A V K I 2 0 1 0 0 0 2 0 0 0 0 1 0 1 0 1 1 0 0 3 0 0 12 0 1292.6612 Q9BYD6 Q9BYD6 157 168 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 2.5163E-06 195.51 By MS/MS By matching 7.67 0.471 1 2 2 1 5799800 5700200 99599 14283 2371 15108 36490;36491;36492 29197;29198 29198 2 75564 134400 VAVGELTDEDVK ATVILANHVAKKDNKVAVGELTDEDVKMIT DNKVAVGELTDEDVKMITSLSKDQQIGEKI K V A V K M 1 0 0 2 0 0 2 1 0 0 1 1 0 0 0 0 1 0 0 3 0 0 12 0 1273.6402 P49736 P49736 451 462 MCM2 DNA replication licensing factor MCM2 yes yes 2 6.0655E-05 164.64 By MS/MS 3.5 0.5 1 1 2 1918200 1918200 0 14284 958 15109 36493;36494 29199 29199 1 78231 0 VAVLQALASTVNR GIEEVVIPKKKTWDKVAVLQALASTVNRDT DKVAVLQALASTVNRDTTAVPYVFQDDPYL K V A N R D 3 1 1 0 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 13 0 1340.7776 Q96EY7 Q96EY7 68 80 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 2.4629E-11 227.36 By MS/MS 5 0 1 1 547260 547260 0 14285 2151 15110 36495 29200 29200 1 5488.7 0 VAVQAISADEEAPDYGSGVR VAIVSEKGEVKGFLRVAVQAISADEEAPDY ISADEEAPDYGSGVRQSGTAKISFDDQHFE R V A V R Q 4 1 0 2 0 1 2 2 0 1 0 0 0 0 1 2 0 0 1 3 0 0 20 0 2032.9702 Q12756 Q12756 885 904 KIF1A Kinesin-like protein KIF1A yes yes 2 7.0341E-27 290.63 By MS/MS 2.5 1.12 1 1 1 1 4 1730000 1730000 0 14286 1324 15111 36496;36497;36498;36499 29201;29202;29203 29203 3 434520 0 VAVQGDVVR NNCTTSEDSLVLYNRVAVQGDVVRELKAKK LVLYNRVAVQGDVVRELKAKKAPKEDVDAA R V A V R E 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 9 0 941.52943 P07814 P07814 757 765 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0018505 123.21 By MS/MS By matching 3.75 0.829 2 1 1 3 1 17330000 17216000 113740 14287 512 15112 36500;36501;36502;36503 29204;29205 29205 2 596900 14478 VAVQGDVVRELK NNCTTSEDSLVLYNRVAVQGDVVRELKAKK YNRVAVQGDVVRELKAKKAPKEDVDAAVKQ R V A L K A 1 1 0 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 12 1 1311.751 P07814 P07814 757 768 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0076383 115 By MS/MS 3 0 1 1 1294300 1294300 0 14288 512 15113 36504 29206 29206 1 23682 0 VAVTEGCQPSR EVTYDDVPIPNSPFKVAVTEGCQPSRVQAQ SPFKVAVTEGCQPSRVQAQGPGLKEAFTNK K V A S R V 1 1 0 0 1 1 1 1 0 0 0 0 0 0 1 1 1 0 0 2 0 0 11 0 1202.5714 O75369 O75369 1320 1330 FLNB Filamin-B yes yes 2 2.3315E-05 160.77 By MS/MS 1.5 0.5 1 1 2 442690 442690 0 14289 315 15114 36505;36506 29207;29208 29208 2 139300 0 VAVTPPGLAR SATYVNTEGRAQQTKVAVTPPGLAREDWKI AQQTKVAVTPPGLAREDWKIIRALSEIAGM K V A A R E 2 1 0 0 0 0 0 1 0 0 1 0 0 0 2 0 1 0 0 2 0 0 10 0 979.58147 P28331 P28331 608 617 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.029398 82.279 By MS/MS 5 0 1 1 900360 900360 0 14290 753 15115 36507 29209 29209 1 9030.1 0 VAVVAGYGDVGK IDGIKRATDVMIAGKVAVVAGYGDVGKGCA AGKVAVVAGYGDVGKGCAQALRGFGARVII K V A G K G 2 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 0 1 4 0 0 12 0 1133.6081 P23526 P23526 215 226 AHCY Adenosylhomocysteinase yes yes 2 0.0009687 125.75 By MS/MS 7 0 1 1 4143600 4143600 0 14291 706 15116 36508 29210 29210 1 65046 0 VAVVCSSNQNR ______________________________ SPLRVAVVCSSNQNRSMEAHNILSKRGFSV R V A N R S 1 1 2 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 11 0 1232.5932 Q9NP77 Q9NP77 8 18 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 2 1.1055E-05 157.34 By MS/MS 9 0 1 1 560150 560150 0 14292 2525 15117 36509 29211 29211 1 11024 0 VAVWPVLR SLNRLLLVPCPPLRRVAVWPVLRERAGAPG PCPPLRRVAVWPVLRERAGAPGARNTAAVL R V A L R E 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 3 0 0 8 0 938.57017 Q9BVQ7 Q9BVQ7 110 117 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.047873 83.287 By MS/MS 5 0 1 1 69401 69401 0 14293 2338 15118 36510 29212 29212 1 696.06 0 VCAASLYVLGTATR QALASVAIPGFTINRVCAASLYVLGTATRW RVCAASLYVLGTATRWPLAVRKWTTTALGL R V C T R W 3 1 0 0 1 0 0 1 0 0 2 0 0 0 0 1 2 0 1 2 0 0 14 0 1480.7708 Q9UDX5 Q9UDX5 103 116 MTFP1 Mitochondrial fission process protein 1 yes yes 2 1.6551E-16 252.97 By MS/MS 9.5 0.5 1 1 2 937290 937290 0 14294 2711 15119 36511;36512 29213;29214 29213 2 21061 0 VCACPGRDR DSSGNLLGRNSFEVRVCACPGRDRRTEEEN NSFEVRVCACPGRDRRTEEENLRKKGEPHH R V C D R R 1 2 0 1 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1089.4808 P04637 P04637 274 282 TP53 Cellular tumor antigen p53 yes yes 2 0.03731 104.75 By MS/MS By matching 5 0.816 1 1 1 1 2 660530 599450 61080 14295 476 15120 36513;36514;36515 29215 29215 1 4120.8 101500 VCDEPHPLLVK TFSGFGFINSENVFKVCDEPHPLLVKEMIQ NVFKVCDEPHPLLVKEMIQHCVNANIDEAY K V C V K E 0 0 0 1 1 0 1 0 1 0 2 1 0 0 2 0 0 0 0 2 0 0 11 0 1305.6751 P35250 P35250 254 264 RFC2 Replication factor C subunit 2 yes yes 2 0.00054351 131.5 By MS/MS 7 0 1 1 367160 367160 0 14296 817 15121 36516 29216 29216 0 5763.8 0 VCDIAAELAR LMIIQMETQSSMRKKVCDIAAELARNLIDE SMRKKVCDIAAELARNLIDEDGNNQWPEGL K V C A R N 3 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1116.5597 O00410 O00410 109 118 IPO5 Importin-5 yes yes 2 0.0068331 101.46 By MS/MS 5 1.41 1 1 1 1 1 5 9809900 9809900 0 14297 103 15122 36517;36518;36519;36520;36521 29217;29218 29217 2 683870 0 VCEEIAIIPSK KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN TNKRVCEEIAIIPSKKLRNKIAGYVTHLMK R V C S K K 1 0 0 0 1 0 2 0 0 3 0 1 0 0 1 1 0 0 0 1 0 0 11 0 1257.6639 P08708 P08708 34 44 RPS17 40S ribosomal protein S17 yes yes 2 0.00018205 162.64 By MS/MS By matching 9.33 0.471 2 1 2 1 26765000 26712000 53345 14298 527 15123 36522;36523;36524 29219;29220 29220 2 834770 121640 VCEEIAIIPSKK KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN NKRVCEEIAIIPSKKLRNKIAGYVTHLMKR R V C K K L 1 0 0 0 1 0 2 0 0 3 0 2 0 0 1 1 0 0 0 1 0 0 12 1 1385.7588 P08708 P08708 34 45 RPS17 40S ribosomal protein S17 yes yes 2;3 3.2158E-08 215.83 By MS/MS By matching 9.4 0.49 3 2 4 1 67496000 67472000 24652 14299 527 15124 36525;36526;36527;36528;36529 29221;29222;29223;29224 29224 4 2003300 56214 VCENIPIVLCGNK VTYKNVPNWHRDLVRVCENIPIVLCGNKVD VRVCENIPIVLCGNKVDIKDRKVKAKSIVF R V C N K V 0 0 2 0 2 0 1 1 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1514.7585 P62826 P62826 111 123 RAN GTP-binding nuclear protein Ran yes yes 2 2.3272E-05 186.87 By MS/MS 8.5 0.5 1 1 2 4332200 4332200 0 14300 1172 15125 36530;36531 29225;29226 29226 2 65182 0 VCEPCYEQLNR KYSTIPKFGIEKEVRVCEPCYEQLNRKAEG KEVRVCEPCYEQLNRKAEGKATSTTELPPE R V C N R K 0 1 1 0 2 1 2 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 11 0 1466.6282 O14964 O14964 211 221 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 2 0.018659 86.344 By MS/MS 4 0 1 1 1824200 1824200 0 14301 149 15126 36532 29227 29227 1 171670 0 VCETDGCSSEAK ______________________________ ETRVCETDGCSSEAKLQCPTCIKLGIQGSY R V C A K L 1 0 0 1 2 0 2 1 0 0 0 1 0 0 0 2 1 0 0 1 0 0 12 0 1341.5177 P53582 P53582 8 19 METAP1 Methionine aminopeptidase 1 yes yes 2 0.00041424 136.52 By MS/MS 7 0 1 1 282720 282720 0 14302 1031 15127 36533 29228 29228 1 4438.2 0 VCFGMLPK AVGVACGMCLGWSLRVCFGMLPKSKTSKTH CLGWSLRVCFGMLPKSKTSKTHTDTESEAS R V C P K S 0 0 0 0 1 0 0 1 0 0 1 1 1 1 1 0 0 0 0 1 0 0 8 0 950.47178 Q9Y3E5 Q9Y3E5 35 42 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 2 0.021839 97.596 By MS/MS 9 0 1 1 269460 269460 0 14303 2876 15128 36534 29229 29229 1 5303.1 0 VCGDSDKGFVVINQK FIEDRVKKIIELKRKVCGDSDKGFVVINQK VCGDSDKGFVVINQKGIDPFSLDALSKEGI K V C Q K G 0 0 1 2 1 1 0 2 0 1 0 2 0 1 0 1 0 0 0 3 0 0 15 1 1664.8192 P40227 P40227 281 295 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 1.7617E-23 251.75 By MS/MS 6.5 0.957 1 2 2 1 6 68949000 68949000 0 14304 858 15129 36535;36536;36537;36538;36539;36540 29230;29231;29232;29233;29234;29235 29232 6 527390 0 VCHAHPTLSEAFR ALALEYGASCEDIARVCHAHPTLSEAFREA ARVCHAHPTLSEAFREANLAASFGKSINF_ R V C F R E 2 1 0 0 1 0 1 0 2 0 1 0 0 1 1 1 1 0 0 1 0 0 13 0 1523.7303 P09622 P09622 483 495 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 3 0.0006502 130.44 By MS/MS 6 0 1 1 2252600 2252600 0 14305 539 15130 36541 29236 29236 1 15485 0 VCHANPSER FGDILQLVIVELIYKVCHANPSERARFIRC VELIYKVCHANPSERARFIRCIYNLLQSSS K V C E R A 1 1 1 0 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1068.4771 P53618 P53618 234 242 COPB1 Coatomer subunit beta yes yes 2 0.016146 90.601 By MS/MS 4.67 0.471 1 2 3 2288100 2288100 0 14306 1033 15131 36542;36543;36544 29237;29238 29237 2 173780 0 VCHLGDQLEGVNTPR HFQELDEHISYVATKVCHLGDQLEGVNTPR VCHLGDQLEGVNTPRQRAVEAQKLMKYFNE K V C P R Q 0 1 1 1 1 1 1 2 1 0 2 0 0 0 1 0 1 0 0 2 0 0 15 0 1693.8206 O00471 O00471 110 124 EXOC5 Exocyst complex component 5 yes yes 3 0.0069828 158.31 By MS/MS 5 0 1 1 3054300 3054300 0 14307 108 15132 36545 29239 29239 1 30633 0 VCLAEVYQDK ARYIVKNPQAYLNYKVCLAEVYQDKALVGD YLNYKVCLAEVYQDKALVGDFMNRRGDYDD K V C D K A 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 10 0 1223.5856 Q12789 Q12789 1335 1344 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0018344 112.71 By MS/MS 2.5 0.5 1 1 2 1987400 1987400 0 14308 1328 15133 36546;36547 29240;29241 29240 2 555720 0 VCLDIIYK DFVQVMRHRDDERQKVCLDIIYKMMPKLKP RDDERQKVCLDIIYKMMPKLKPVELRELLN K V C Y K M 0 0 0 1 1 0 0 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 8 0 1022.5471 P78527 P78527 2434 2441 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.042822 85.212 By MS/MS 1.5 0.5 1 1 2 813770 813770 0 14309 1225 15134 36548;36549 29242;29243 29242 2 241810 0 VCLESAVELPK IEIPIHIVPHVTIGKVCLESAVELPKILCQ TIGKVCLESAVELPKILCQEEQDAYRRIHS K V C P K I 1 0 0 0 1 0 2 0 0 0 2 1 0 0 1 1 0 0 0 2 0 0 11 0 1243.6482 P46736 P46736 227 237 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 2 0.00020165 142.98 By MS/MS 8 0 1 1 640830 640830 0 14310 913 15135 36550 29244 29244 1 8090.4 0 VCMDFNIIR GVVHQAPYFGAEDYRVCMDFNIIRKDSLPV GAEDYRVCMDFNIIRKDSLPVCPVDASGCF R V C I R K 0 1 1 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 9 0 1166.5576 P41252 P41252 335 343 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00057748 143.73 By MS/MS 3 0 2 2 834490 834490 0 14311 871 15136;15137 36551;36552 29245;29246 29245 459 2 15269 0 VCNFLASQVPFPSR PGLFGTPLLTSLPEKVCNFLASQVPFPSRL KVCNFLASQVPFPSRLGDPAEYAHLVQAII K V C S R L 1 1 1 0 1 1 0 0 0 0 1 0 0 2 2 2 0 0 0 2 0 0 14 0 1620.8082 Q99714 Q99714 213 226 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 0.00019617 215.77 By MS/MS 8 0 1 1 288100 288100 0 14312 2261 15138 36553 29247 29247 1 3637.3 0 VCNPIITK AEKEEFEHQQKELEKVCNPIITKLYQSAGG QQKELEKVCNPIITKLYQSAGGMPGGMPGG K V C T K L 0 0 1 0 1 0 0 0 0 2 0 1 0 0 1 0 1 0 0 1 0 0 8 0 943.51609 P11142 P11142 602 609 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.0019044 148.04 By MS/MS By MS/MS 5 0 2 1 1 15916000 15650000 266480 14313 572 15139 36554;36555 29248;29249 29248 2 156960 223790 VCNYGLTFTQK TDTGKASGNLETKYKVCNYGLTFTQKWNTD TKYKVCNYGLTFTQKWNTDNTLGTEISWEN K V C Q K W 0 0 1 0 1 1 0 1 0 0 1 1 0 1 0 0 2 0 1 1 0 0 11 0 1329.6387 Q9Y277 Q9Y277 64 74 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 6.2949E-07 176.48 By MS/MS 8 0 1 1 0 0 0 14314 2818 15140 36556 29250 29250 1 0 0 VCPQIDADNATDNK SRSHAIFTIHVCQTRVCPQIDADNATDNKI RVCPQIDADNATDNKIISESAQMNEFETLT R V C N K I 2 0 2 3 1 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 14 0 1559.6886 Q7Z4S6 Q7Z4S6 239 252 KIF21A Kinesin-like protein KIF21A yes yes 2 0.0018528 112.84 By MS/MS 2 0 1 1 175010 175010 0 14315 1795 15141 36557 29251 29251 1 59197 0 VCQGIGMVNR APTQWLDGKHTIFGRVCQGIGMVNRVGMVE TIFGRVCQGIGMVNRVGMVETNSQDRPVDD R V C N R V 0 1 1 0 1 1 0 2 0 1 0 0 1 0 0 0 0 0 0 2 0 0 10 0 1132.5481 Q9Y3C6 Q9Y3C6 132 141 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 2 0.0019041 112.41 By MS/MS 10 0 1 1 179740 179740 0 14316 2868 15142 36558 29252 29252 1192 1 9687.1 0 VCQSLINVEGK LTSPDSGSAPMITCRVCQSLINVEGKMHQH ITCRVCQSLINVEGKMHQHVVKCGVCNEAT R V C G K M 0 0 1 0 1 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1245.6387 Q86T03 Q86T03 86 96 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 2 1.0476E-05 184.24 By MS/MS 8 0 1 1 1687100 1687100 0 14317 1812 15143 36559 29253 29253 1 21300 0 VCSTNDLK AQNDLIWNIKDELKKVCSTNDLKELLIFNK IKDELKKVCSTNDLKELLIFNKQQVPSGES K V C L K E 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 8 0 935.43823 P09874 P09874 255 262 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.02311 96.19 By MS/MS 4 0 1 1 1408900 1408900 0 14318 543 15144 36560 29254 29254 1 132580 0 VCTLAIIDPGDSDIIR GNNIELGTACGKYYRVCTLAIIDPGDSDII CTLAIIDPGDSDIIRSMPEQTGEK______ R V C I R S 1 1 0 3 1 0 0 1 0 4 1 0 0 0 1 1 1 0 0 1 0 0 16 0 1756.9029 P62888 P62888 91 106 RPL30 60S ribosomal protein L30 yes yes 2 0.00055126 184.87 By MS/MS 10 0 1 1 2669600 2669600 0 14319 1182 15145 36561 29255;29256 29255 2 143880 0 VDALMDEINFMK DVDAAYMNKVELEAKVDALMDEINFMKMFF EAKVDALMDEINFMKMFFDAELSQMQTHVS K V D M K M 1 0 1 2 0 0 1 0 0 1 1 1 2 1 0 0 0 0 0 1 0 0 12 0 1424.668 CON__P13647;P13647;CON__Q922U2 CON__P13647 293 304 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.6754E-05 172.21 By MS/MS By MS/MS 3.12 1.9 2 2 1 1 2 5 3 6836500 6571000 265520 + 14320 52;74 15146 36562;36563;36564;36565;36566;36567;36568;36569 29257;29258;29259;29260;29261;29262;29263 29263 43;44 7 603960 308500 VDALNDEIR GTDLLSQLSLEDQKRVDALNDEIRQLQQEN LEDQKRVDALNDEIRQLQQENRQLLNERIK R V D I R Q 1 1 1 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1043.5247 Q9UQE7 Q9UQE7 797 805 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00054057 145.46 By MS/MS 3 0 1 1 2062000 2062000 0 14321 2807 15147 36570 29264;29265 29264 2 37728 0 VDATADYICK VVTKDGVYVLDLAAKVDATADYICKVKWGD DLAAKVDATADYICKVKWGDIEFPPPFGRE K V D C K V 2 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1154.5278 P53396 P53396 221 230 ACLY ATP-citrate synthase yes yes 2 0.00020511 146.79 By MS/MS 3 1.41 1 1 1 1 1 5 15581000 15581000 0 14322 1030 15148 36571;36572;36573;36574;36575 29266;29267;29268 29268 3 1394800 0 VDATAETDLAKR AKELSKRSPPIPLAKVDATAETDLAKRFDV LAKVDATAETDLAKRFDVSGYPTLKIFRKG K V D K R F 3 1 0 2 0 0 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 12 1 1288.6623 P13667 P13667 235 246 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.0045789 95.483 By MS/MS 5 0 1 1 442560 442560 0 14323 604 15149 36576 29269 29269 1 4438.6 0 VDATEESDLAQQYGVR AGKLKAEGSEIRLAKVDATEESDLAQQYGV DATEESDLAQQYGVRGYPTIKFFRNGDTAS K V D V R G 2 1 0 2 0 2 2 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 16 0 1779.8275 P07237 P07237 82 97 P4HB Protein disulfide-isomerase yes yes 2 3.6856E-70 364.46 By MS/MS By matching 6 0 2 1 1 5365000 5337000 27990 14324 507 15150 36577;36578 29270 29270 1 36688 28682 VDCDQHSDIAQR IKEEFPNENQVVFARVDCDQHSDIAQRYRI FARVDCDQHSDIAQRYRISKYPTLKLFRNG R V D Q R Y 1 1 0 3 1 2 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 12 0 1442.6208 Q9BS26 Q9BS26 90 101 ERP44 Endoplasmic reticulum resident protein 44 yes yes 3 0.052182 66.538 By MS/MS 7 0 1 1 1235200 1235200 0 14325 2303 15151 36579 29271 29271 1 19391 0 VDCTANTNTCNK EAAATRLKGIVPLAKVDCTANTNTCNKYGV LAKVDCTANTNTCNKYGVSGYPTLKIFRDG K V D N K Y 1 0 3 1 2 0 0 0 0 0 0 1 0 0 0 0 3 0 0 1 0 0 12 0 1396.5711 P30101 P30101 83 94 PDIA3 Protein disulfide-isomerase A3 yes yes 2 2.0522E-33 293.88 By MS/MS 6 0 1 1 810040 810040 0 14326 768 15152 36580 29272 29272 1 5568.4 0 VDDESMQR QNEVTKERTAQCFLRVDDESMQRFHNRVRQ TAQCFLRVDDESMQRFHNRVRQILMASGST R V D Q R F 0 1 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 8 0 978.40766 Q6P2Q9 Q6P2Q9 1232 1239 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0064572 118.74 By MS/MS 2 0 2 2 545160 545160 0 14327 1708 15153;15154 36581;36582 29273;29274 29274 915 2 184390 0 VDDFLANEAK DHGFVVCAFNRTVSKVDDFLANEAKGTKVV RTVSKVDDFLANEAKGTKVVGAQSLKEMVS K V D A K G 2 0 1 2 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1120.5401 P52209 P52209 39 48 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 1.2257E-05 172.98 By MS/MS 6.5 0.5 1 1 2 4001100 4001100 0 14328 1011 15155 36583;36584 29275;29276 29275 2 36533 0 VDDHDSEEICLDHLCK VNDSLSDVTSTTSSRVDDHDSEEICLDHLC DDHDSEEICLDHLCKGCPLNGSCSKVHFHL R V D C K G 0 0 0 4 2 0 2 0 2 1 2 1 0 0 0 1 0 0 0 1 0 0 16 0 1983.8302 Q7Z2W4 Q7Z2W4 504 519 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 9.0702E-05 185.2 By MS/MS 4.5 0.5 1 1 2 4219400 4219400 0 14329 1778 15156 36585;36586 29277;29278 29278 2 310960 0 VDDLLIIEEK YVQRLAETVFNFQEKVDDLLIIEEKIDLEV NFQEKVDDLLIIEEKIDLEVRSLETCMYDH K V D E K I 0 0 0 2 0 0 2 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1185.6493 Q14204 Q14204 847 856 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00019086 147.75 By MS/MS 2 0.816 1 1 1 3 1211500 1211500 0 14330 1433 15157 36587;36588;36589 29279;29280;29281;29282 29281 4 310720 0 VDDSSEDKTEFTVK AEQGGQIYDEGYLVKVDDSSEDKTEFTVKN KVDDSSEDKTEFTVKNAQVRGGYVLHIGTI K V D V K N 0 0 0 3 0 0 2 0 0 0 0 2 0 1 0 2 2 0 0 2 0 0 14 1 1598.7312 P49588 P49588 551 564 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2;3 0.001874 164.48 By MS/MS 4.33 0.471 2 1 3 3154000 3154000 0 14331 951 15158 36590;36591;36592 29283;29284 29284 2 229760 0 VDEAVAVLQAHQAK ELLHMLESPESLRSKVDEAVAVLQAHQAKE KVDEAVAVLQAHQAKEAAQKAVNSATGVPT K V D A K E 4 0 0 1 0 2 1 0 1 0 1 1 0 0 0 0 0 0 0 3 0 0 14 0 1477.7889 P11940;Q9H361 P11940 607 620 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2;3 6.5967E-05 194.48 By MS/MS 5 0 2 2 10534000 10534000 0 14332 586 15159 36593;36594 29285;29286 29286 2 105650 0 VDEEPTTLPSGEAKPR ADELAARIKGDAMGRVDEEPTTLPSGEAKP DEEPTTLPSGEAKPRKTLKEKKERRTPSDD R V D P R K 1 1 0 1 0 0 3 1 0 0 1 1 0 0 3 1 2 0 0 1 0 0 16 1 1724.8581 Q9Y4E1;Q641Q2 Q9Y4E1 305 320 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 3 0.029875 67.019 By MS/MS 2 0 1 1 117610 117610 0 14333 1665 15160 36595 29287 29287 1 39780 0 VDEERENFLQTK IPKMLELFKNGHEIKVDEERENFLQTKIAT EIKVDEERENFLQTKIATLDMSSDQIAANL K V D T K I 0 1 1 1 0 1 3 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 12 1 1506.7314 Q9BYD6 Q9BYD6 245 256 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2;3 0.016653 94.82 By MS/MS 7.5 0.5 2 2 4 3254200 3254200 0 14334 2371 15161 36596;36597;36598;36599 29288;29289 29288 2 43945 0 VDEGGWNTVQGAK QQLMTKEKRRPGVQRVDEGGWNTVQGAKNS QRVDEGGWNTVQGAKNSRVLDPSKFLKITK R V D A K N 1 0 1 1 0 1 1 3 0 0 0 1 0 0 0 0 1 1 0 2 0 0 13 0 1359.6419 O43432 O43432 1030 1042 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.047488 84.31 By MS/MS 3 0.816 1 1 1 3 1455700 1455700 0 14335 210 15162 36600;36601;36602 29290 29290 0 255230 0 VDELEAALR AEQRGELALKDAQAKVDELEAALRMAKQNL KDAQAKVDELEAALRMAKQNLARLLCEYQE K V D L R M 2 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1014.5346 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 376 384 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.00052686 149.94 By matching By MS/MS 4 1.41 2 1 1 2 571670 291120 280550 + 14336 70 15163 36603;36604;36605 29291;29292 29291 2 5326.7 117870 VDEMRGYAEK TGLVRHERIEAPWARVDEMRGYAEKLIDYG APWARVDEMRGYAEKLIDYGKLGDTNERAM R V D E K L 1 1 0 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0 10 1 1196.5496 Q9NRX2 Q9NRX2 49 58 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.0023156 116.52 By MS/MS 9 0 1 1 318010 318010 0 14337 2561 15164 36606 29293 29293 1 6258.5 0 VDEMSQDIVK SSNHLGKNLQLLMDRVDEMSQDIVKYNTYM LLMDRVDEMSQDIVKYNTYMRNTSKQQQQK R V D V K Y 0 0 0 2 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 2 0 0 10 0 1162.554 O15372 O15372 250 259 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.00021103 145.9 By MS/MS By matching 7 0 2 1 1 671690 651500 20188 14338 186 15165 36607;36608 29294 29294 98 1 10227 36359 VDENFDCVEADDVEGK AGSLSTMFRVEYASKVDENFDCVEADDVEG DENFDCVEADDVEGKIRQIIPPGFCTNTND K V D G K I 1 0 1 4 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 16 0 1839.7469 O14929 O14929 95 110 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 2.4175E-05 199.33 By MS/MS 7 0 1 1 1153300 1153300 0 14339 146 15166 36609 29295 29295 1 18105 0 VDENGKISR HKRKKVKLAVLKYYKVDENGKISRLRRECP VLKYYKVDENGKISRLRRECPSDECGAGVF K V D S R L 0 1 1 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 1 1016.5251 P62979 P62979 108 116 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 2 0.001601 152.11 By MS/MS 10 0 1 1 766960 766960 0 14340 1190 15167 36610 29296 29296 1 41336 0 VDENGPELLPR VQAQLRASPNTPPGRVDENGPELLPRVAML PPGRVDENGPELLPRVAMLRLLTWVIGTGS R V D P R V 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 0 0 0 0 1 0 0 11 0 1237.6303 Q92616 Q92616 1027 1037 GCN1L1 Translational activator GCN1 yes yes 2 1.0686E-05 172.56 By MS/MS 2 0.816 1 1 1 3 4137600 4137600 0 14341 2064 15168 36611;36612;36613 29297;29298;29299 29298 3 1131400 0 VDFPQDQLTALTGR AGKTIIPLISQCTPKVDFPQDQLTALTGRI KVDFPQDQLTALTGRIQEAGTEVVKAKAGA K V D G R I 1 1 0 2 0 2 0 1 0 0 2 0 0 1 1 0 2 0 0 1 0 0 14 0 1559.7944 P40926 P40926 216 229 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 2.9676E-07 210.93 By MS/MS 7.5 0.5 1 1 2 551850 551850 0 14342 862 15169 36614;36615 29300;29301;29302;29303;29304;29305 29302 6 6967.1 0 VDFSKVPK GQPDVVVKEDEEYKRVDFSKVPKLKTVFQK EDEEYKRVDFSKVPKLKTVFQKENGTVTAA R V D P K L 0 0 0 1 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 2 0 0 8 1 918.51747 P24752 P24752 259 266 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 3 0.017857 101.6 By MS/MS 7 0 1 1 1228500 1228500 0 14343 716 15170 36616 29306 29306 1 19285 0 VDFTFYPR SDLYMASLSCLLNYRVDFTFYPRRTPLQHE SCLLNYRVDFTFYPRRTPLQHEAPLWMDQL R V D P R R 0 1 0 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 1 1 0 0 8 0 1043.5076 Q9H857 Q9H857 481 488 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.046954 107.29 By MS/MS 6 0 1 1 2177300 2177300 0 14344 2472 15171 36617 29307 29307 0 14967 0 VDGMDILCVR STDYYKRGDFIPGLRVDGMDILCVREATRF IPGLRVDGMDILCVREATRFAAAYCRSGKG R V D V R E 0 1 0 2 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 2 0 0 10 0 1176.5631 P08559 P08559 254 263 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 9.0804E-05 154.56 By MS/MS 7 0 1 1 677700 677700 0 14345 524 15172 36618 29308 29308 1 10639 0 VDGNDVFAVYNATK GIAARGPGYGIMSIRVDGNDVFAVYNATKE RVDGNDVFAVYNATKEARRRAVAENQPFLI R V D T K E 2 0 2 2 0 0 0 1 0 0 0 1 0 1 0 0 1 0 1 3 0 0 14 0 1511.7256 P12694 P12694 298 311 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes yes 2 0.0065056 102.97 By MS/MS 7 0 1 1 894620 894620 0 14346 594 15173 36619 29309 29309 0 14044 0 VDIAPHVR KLEKLMPEIVATASKVDIAPHVRDGYIMMF IVATASKVDIAPHVRDGYIMMFNYLPITFG K V D V R D 1 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 2 0 0 8 0 905.5083 Q92616 Q92616 1746 1753 GCN1L1 Translational activator GCN1 yes yes 2 0.027017 77.282 By MS/MS 2.5 0.5 1 1 2 562490 562490 0 14347 2064 15174 36620;36621 29310 29310 1 157790 0 VDIEGPDVNIEGPEGK DVNLPKADVDISGPKVDIEGPDVNIEGPEG DIEGPDVNIEGPEGKLKGPKLKMPEMNIKA K V D G K L 0 0 1 2 0 0 3 3 0 2 0 1 0 0 2 0 0 0 0 2 0 0 16 0 1666.805 Q09666 Q09666 2546 2561 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.0042208 110.25 By MS/MS 1 0 1 1 0 0 0 14348 1320 15175 36622 29311 29311 1 0 0 VDILDPALLR FQPNTQVKVIAATNRVDILDPALLRSGRLD AATNRVDILDPALLRSGRLDRKIEFPMPNE R V D L R S 1 1 0 2 0 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1123.6601 P17980 P17980 335 344 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.0056168 104.2 By MS/MS 6.5 0.5 1 1 2 3662100 3662100 0 14349 647 15176 36623;36624 29312;29313 29312 2 27166 0 VDKGVVPLAGTDGETTTQGLDGLSER FVRTIQDKGIVVGIKVDKGVVPLAGTDGET DGETTTQGLDGLSERCAQYKKDGADFAKWR K V D E R C 1 1 0 3 0 1 2 5 0 0 3 1 0 0 1 1 4 0 0 3 0 0 26 1 2614.3086 P09972 P09972 109 134 ALDOC Fructose-bisphosphate aldolase C yes yes 3 1.8855E-09 137.58 By MS/MS 7 0 1 1 1767200 1767200 0 14350 545 15177 36625 29314 29314 1 27742 0 VDLLNQEIEFLK DVDNAYMIKVELQSKVDLLNQEIEFLKVLY QSKVDLLNQEIEFLKVLYDAEISQIHQSVT K V D L K V 0 0 1 1 0 1 2 0 0 1 3 1 0 1 0 0 0 0 0 1 0 0 12 0 1459.7922 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 303 314 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 1.4758E-21 268.91 By MS/MS By MS/MS 5.07 2.87 2 1 2 1 2 2 1 1 2 8 6 13806000 11021000 2784500 + 14351 55 15178 36626;36627;36628;36629;36630;36631;36632;36633;36634;36635;36636;36637;36638;36639 29315;29316;29317;29318;29319;29320;29321;29322;29323;29324;29325;29326;29327;29328;29329;29330;29331;29332;29333;29334 29317 20 403190 1279900 VDLPLIDSLIR IYASQTEQEYLKIEKVDLPLIDSLIRVLQN KIEKVDLPLIDSLIRVLQNMEQCQKKPENS K V D I R V 0 1 0 2 0 0 0 0 0 2 3 0 0 0 1 1 0 0 0 1 0 0 11 0 1252.7391 Q96ER3 Q96ER3 348 358 SAAL1 Protein SAAL1 yes yes 2 0.0081919 95.483 By MS/MS 6 0 1 1 131860 131860 0 14352 2148 15179 36640 29335 29335 1 906.43 0 VDLYQQASPPDALR KATPSTYSGVFRTQRVDLYQQASPPDALRW RVDLYQQASPPDALRWIPKPWERTGPPPRE R V D L R W 2 1 0 2 0 2 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 14 0 1571.7944 P48634 P48634 2106 2119 PRRC2A Protein PRRC2A yes yes 2 0.00061446 132.14 By MS/MS 1 0 1 1 139430 139430 0 14353 938 15180 36641 29336;29337 29337 2 33599 0 VDMLSEINIAPR PRNMRLPDPFTPNLKVDMLSEINIAPRILT NLKVDMLSEINIAPRILTNFTGVMPPQFKK K V D P R I 1 1 1 1 0 0 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 12 0 1356.7071 A5YKK6 A5YKK6 2152 2163 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.004308 105.17 By MS/MS 2 0 1 1 209270 209270 0 14354 19 15181 36642 29338;29339 29338 5 2 70783 0 VDMTFEEEAQLLQLK NSYDLAIKAITSSAKVDMTFEEEAQLLQLK VDMTFEEEAQLLQLKVKCLNNLAASQLKLD K V D L K V 1 0 0 1 0 2 3 0 0 0 3 1 1 1 0 0 1 0 0 1 0 0 15 0 1792.8917 Q14318 Q14318 257 271 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 9.6996E-33 297.83 By MS/MS 6 0 1 1 624440 624440 0 14355 1438 15182 36643 29340 29340 848 1 4292.5 0 VDNALQSGNSQESVTEQDSK LLNNFYPREAKVQWKVDNALQSGNSQESVT QSGNSQESVTEQDSKDSTYSLSSTLTLSKA K V D S K D 1 0 2 2 0 3 2 1 0 0 1 1 0 0 0 4 1 0 0 2 0 0 20 0 2134.9614 P0DOX7;P01834 P0DOX7 150 169 IGKC Ig kappa chain C region yes no 2 1.0458E-24 227.91 By MS/MS 2 0.816 1 1 1 3 131320 0 131320 14356 452 15183 36644;36645;36646 29341 29341 1 0 111840 VDNDENEHQLSLR LFGCELKADKDYHFKVDNDENEHQLSLRTV FKVDNDENEHQLSLRTVSLGAGAKDELHIV K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748 P06748 33 45 NPM1 Nucleophosmin yes yes 2 1.1177E-07 211.63 By MS/MS 8 1 1 1 2 2940000 2940000 0 14357 503 15184 36647;36648 29342;29343 29342 2 46152 0 VDNEFDQR SALKTLMAQSIYGGRVDNEFDQRLLNTFLE QSIYGGRVDNEFDQRLLNTFLERLFTTRSF R V D Q R L 0 1 1 2 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 8 0 1021.4465 Q14204 Q14204 4256 4263 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 5.1557E-05 166.16 By MS/MS 1.5 0.5 1 1 2 834790 834790 0 14358 1433 15185 36649;36650 29344;29345 29345 2 201160 0 VDNSSLTGESEPQTR RIPADLRIISANGCKVDNSSLTGESEPQTR VDNSSLTGESEPQTRSPDFTNENPLETRNI K V D T R S 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 3 2 0 0 1 0 0 15 0 1618.7435 P05023;P13637;P50993;P20648 P05023 213 227 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 yes no 2 8.6597E-25 291.75 By MS/MS By MS/MS 3.17 1.34 1 1 1 2 1 5 1 11789000 11663000 126050 14359 481 15186 36651;36652;36653;36654;36655;36656 29346;29347;29348;29349;29350;29351;29352 29349 7 1839500 268570 VDPEIQNVKAQER EVSVNQSLLQPLNVKVDPEIQNVKAQEREQ VKVDPEIQNVKAQEREQIKTLNNKFASFID K V D E R E 1 1 1 1 0 2 2 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 13 1 1524.7896 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 167 179 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 4.5936E-05 168.82 By MS/MS 3 0 1 1 719300 0 719300 + 14360 55 15187 36657 29353;29354 29354 2 0 91557 VDPEIQNVKAQEREQIK EVSVNQSLLQPLNVKVDPEIQNVKAQEREQ PEIQNVKAQEREQIKTLNNKFASFIDKVRF K V D I K T 1 1 1 1 0 3 3 0 0 2 0 2 0 0 1 0 0 0 0 2 0 0 17 2 2023.0698 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 167 183 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.042281 84.759 By MS/MS 3 0 1 1 3857600 0 3857600 + 14361 55 15188 36658 29355 29355 1 0 491020 VDPSQPIDLTQLVNGR PLSLNRLQYLIDLGRVDPSQPIDLTQLVNG DPSQPIDLTQLVNGRGVTIQPLKRDYGVQL R V D G R G 0 1 1 2 0 2 0 1 0 1 2 0 0 0 2 1 1 0 0 2 0 0 16 0 1750.9214 Q9P015 Q9P015 110 125 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 1.0603E-07 222.81 By MS/MS 8 0 1 1 1793000 1793000 0 14362 2659 15189 36659 29356 29356 1 22637 0 VDQIIMAK WAIKLATNAAVTVLRVDQIIMAKPAGGPKP AAVTVLRVDQIIMAKPAGGPKPPSGKKDWD R V D A K P 1 0 0 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 8 0 916.50519 P50990 P50990 521 528 CCT8 T-complex protein 1 subunit theta yes yes 2 0.021104 97.635 By MS/MS 6 0 1 1 2006800 2006800 0 14363 984 15190 36660 29357 29357 538 1 13795 0 VDQIIMAKPAGGPKPPSGK WAIKLATNAAVTVLRVDQIIMAKPAGGPKP IMAKPAGGPKPPSGKKDWDDDQND______ R V D G K K 2 0 0 1 0 1 0 3 0 2 0 3 1 0 4 1 0 0 0 1 0 0 19 2 1890.0397 P50990 P50990 521 539 CCT8 T-complex protein 1 subunit theta yes yes 3 0.033238 69.024 By MS/MS 6 0 1 1 1580500 1580500 0 14364 984 15191 36661 29358 29358 538 1 10865 0 VDQIQEIVTGNPTVIK LRLFKTALQEEIKSKVDQIQEIVTGNPTVI DQIQEIVTGNPTVIKMVVSFNRGARGQNAL K V D I K M 0 0 1 1 0 2 1 1 0 3 0 1 0 0 1 0 2 0 0 3 0 0 16 0 1752.9622 P46940 P46940 1038 1053 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.00035797 125.03 By MS/MS 2 0 1 1 116650 116650 0 14365 922 15192 36662 29359 29359 0 39455 0 VDQLKSDQSR LEPYFESFINNLRRRVDQLKSDQSRLDSEL NLRRRVDQLKSDQSRLDSELKNMQDMVEDY R V D S R L 0 1 0 2 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 10 1 1174.5942 CON__P04264;P04264 P04264 242 251 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 5.7129E-08 201.61 By MS/MS By MS/MS 4.76 2.6 2 2 2 2 3 2 1 1 1 1 6 11 12006000 6643100 5362700 + 14366 471;45 15193 36663;36664;36665;36666;36667;36668;36669;36670;36671;36672;36673;36674;36675;36676;36677;36678;36679 29360;29361;29362;29363;29364;29365;29366;29367;29368;29369;29370;29371;29372;29373;29374 29364 15 510400 3050900 VDQLKSDQSRLDSELK LEPYFESFINNLRRRVDQLKSDQSRLDSEL DQLKSDQSRLDSELKNMQDMVEDYRNKYED R V D L K N 0 1 0 3 0 2 1 0 0 0 3 2 0 0 0 3 0 0 0 1 0 0 16 2 1859.9589 CON__P04264;P04264 P04264 242 257 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.0024799 119.77 By MS/MS By MS/MS 4 0.816 1 1 1 2 1 4940500 2598900 2341600 + 14367 471;45 15194 36680;36681;36682 29375;29376 29375 2 163610 298050 VDQSILTGESVSVIK PADIRLTSIKSTTLRVDQSILTGESVSVIK VDQSILTGESVSVIKHTDPVPDPRAVNQDK R V D I K H 0 0 0 1 0 1 1 1 0 2 1 1 0 0 0 3 1 0 0 3 0 0 15 0 1573.8563 P16615;O14983 P16615 175 189 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 3.4045E-17 267.77 By MS/MS By MS/MS 4 2.39 1 1 1 2 1 1 6 1 14922000 14866000 56798 14368 635 15195 36683;36684;36685;36686;36687;36688;36689 29377;29378;29379;29380;29381;29382;29383;29384 29384 7 1925300 121020 VDQVQDIVTGNPTVIK LKLFKTALEEEIKSKVDQVQDIVTGNPTVI DQVQDIVTGNPTVIKMVVSFNRGARGQNTL K V D I K M 0 0 1 2 0 2 0 1 0 2 0 1 0 0 1 0 2 0 0 4 0 0 16 0 1724.9309 Q13576 Q13576 951 966 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 7.2433E-05 191.01 By MS/MS 3 0 1 1 253390 253390 0 14369 1399 15196 36690 29385 29385 1 4636.3 0 VDREQLVQK ______________________________ ______________________________ M V D Q K A 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 1 1113.6142 P61981 P61981 2 10 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.0013839 101.25 By MS/MS By MS/MS 8 0 2 1 1 9414300 9296500 117770 14370 1136 15197 36691;36692 29386;29387 29387 2 117370 158920 VDSAATSGYEIGNPPDYR FRKLVTDQNISENWRVDSAATSGYEIGNPP AATSGYEIGNPPDYRGQSCMKRHGIPMSHV R V D Y R G 2 1 1 2 0 0 1 2 0 1 0 0 0 0 2 2 1 0 2 1 0 0 18 0 1910.8646 P24666 P24666 42 59 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 3.8221E-11 256.13 By MS/MS 9.5 0.5 1 1 2 2193000 2193000 0 14371 715 15198 36693;36694 29388 29388 1 110180 0 VDSEVLSAK TPRFAEFLLPLLIEKVDSEVLSAKLDSLQT PLLIEKVDSEVLSAKLDSLQTLNACCAVYG K V D A K L 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 2 0 0 9 0 946.49713 Q96T76 Q96T76 267 275 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.0013614 129.42 By MS/MS 4 0 1 1 374970 374970 0 14372 2240 15199 36695 29389 29389 1 35287 0 VDSLLENLEK DLQAIKKELTQIKQKVDSLLENLEKIEKEQ QIKQKVDSLLENLEKIEKEQSKQAVEMKND K V D E K I 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1158.6132 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 207 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.00099724 130.41 By MS/MS 7 0 1 1 1228500 1228500 0 14373 514 15200 36696 29390 29390 1 19285 0 VDSTTCLFPVEEK GERGKDKKGSCNLSRVDSTTCLFPVEEKAV SRVDSTTCLFPVEEKAVEYYFASDASAVIE R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 4.728E-05 179.19 By MS/MS 5 0 1 1 2885500 2885500 0 14374 1295 15201 36697 29391 29391 1 28940 0 VDTLTGEVNFLK DVDAAYVSKVDLESRVDTLTGEVNFLKYLF ESRVDTLTGEVNFLKYLFLTELSQVQTHIS R V D L K Y 0 0 1 1 0 0 1 1 0 0 2 1 0 1 0 0 2 0 0 2 0 0 12 0 1334.7082 CON__Q7Z794;Q7Z794 CON__Q7Z794 289 300 KRT77 Keratin, type II cytoskeletal 1b yes no 2 1.6275E-05 172.8 By MS/MS 3 0 1 1 126970 0 126970 + 14375 72 15202 36698 29392;29393 29393 2 0 16162 VDTQDQGMYR NLAAAQRDAVDFDVRVDTQDQGMYRFLTSQ DFDVRVDTQDQGMYRFLTSQQLFKLLDCLL R V D Y R F 0 1 0 2 0 2 0 1 0 0 0 0 1 0 0 0 1 0 1 1 0 0 10 0 1211.5241 Q9Y6D6 Q9Y6D6 1663 1672 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 4.0222E-05 157.99 By MS/MS 2 0 1 1 222180 222180 0 14376 2941 15203 36699 29394 29394 1 75149 0 VDVADQAQDKDRDDR ALSLNEESLGNRRIRVDVADQAQDKDRDDR VDVADQAQDKDRDDRSFGRDRNRDSDKTDT R V D D R S 2 2 0 6 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 15 2 1744.7976 P23588 P23588 168 182 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.010162 89.231 By MS/MS 7.5 0.5 1 1 2 1246200 1246200 0 14377 708 15204 36700;36701 29395;29396 29395 2 18615 0 VDVAVLK TAVCYSAIIFETPLRVDVAVLKARAKLLQK IIFETPLRVDVAVLKARAKLLQKYLCDEQK R V D L K A 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 7 0 742.45889 Q04637 Q04637 1499 1505 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.015433 121.29 By MS/MS 2.5 0.5 1 1 2 8382900 8382900 0 14378 1291 15205 36702;36703 29397;29398 29398 2 2735400 0 VDVAVNCAGIAVASK DVQTALALAKGKFGRVDVAVNCAGIAVASK VDVAVNCAGIAVASKTYNLKKGQTHTLEDF R V D S K T 4 0 1 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 4 0 0 15 0 1472.7657 Q99714 Q99714 85 99 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 0.00012863 179.83 By MS/MS 8 0 1 1 1502000 1502000 0 14379 2261 15206 36704 29399 29399 1 18963 0 VDVEALENSAGATYIR ALSKHLPSSDSMSLKVDVEALENSAGATYI DVEALENSAGATYIRKKGGKVTGDSQPKEQ K V D I R K 3 1 1 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 1 2 0 0 16 0 1706.8475 O76094 O76094 516 531 SRP72 Signal recognition particle subunit SRP72 yes yes 2 5.7572E-44 328.43 By MS/MS 4 0.816 1 1 1 3 3321800 3321800 0 14380 362 15207 36705;36706;36707 29400 29400 1 55084 0 VDVEVPDVSLEGPEGK DVNLPKADIDVSGPKVDVEVPDVSLEGPEG DVEVPDVSLEGPEGKLKGPKFKMPEMHFKA K V D G K L 0 0 0 2 0 0 3 2 0 0 1 1 0 0 2 1 0 0 0 4 0 0 16 0 1667.8254 Q09666 Q09666 1290 1305 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.00069708 126.5 By MS/MS 1 0 1 1 107450 107450 0 14381 1320 15208 36708 29401 29401 1 25893 0 VDVFTNLGYR APECKVLTAAGNSCRVDVFTNLGYRAFSLS GNSCRVDVFTNLGYRAFSLSF_________ R V D Y R A 0 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 1 2 0 0 10 0 1182.6033 Q86W42 Q86W42 326 335 THOC6 THO complex subunit 6 homolog yes yes 2 0.00023653 144.65 By MS/MS 7.5 0.5 1 1 2 776970 776970 0 14382 1835 15209 36709;36710 29402;29403 29403 2 11302 0 VDVGQQPLR VRGANTHLSTFSFTKVDVGQQPLRINGVKV TFSFTKVDVGQQPLRINGVKVYTENVDKRQ K V D L R I 0 1 0 1 0 2 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 9 0 1010.5509 A0FGR8 A0FGR8 240 248 ESYT2 Extended synaptotagmin-2 yes yes 2 0.0034499 111.95 By MS/MS 4.5 0.5 1 1 2 1243600 1243600 0 14383 6 15210 36711;36712 29404 29404 1 94512 0 VDVSLIER CLATTQQLEEKLKEKVDVSLIERINLTGEM EEKLKEKVDVSLIERINLTGEMDTFSTVIS K V D E R I 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 8 0 929.5182 Q5VIR6 Q5VIR6 577 584 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.041619 85.67 By MS/MS 4 0 1 1 1398400 1398400 0 14384 1644 15211 36713 29405 29405 1 131600 0 VDVTEQPGLSGR SFAEWGEDLEVNIAKVDVTEQPGLSGRFII IAKVDVTEQPGLSGRFIITALPTIYHCKDG K V D G R F 0 1 0 1 0 1 1 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1256.6361 Q9H3N1 Q9H3N1 83 94 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 7.224E-05 176.18 By MS/MS 8.5 0.5 1 1 2 1925200 1925200 0 14385 2438 15212 36714;36715 29406 29406 1 25408 0 VDWLTEK LTITQAVIFINTRRKVDWLTEKMHARDFTV IFINTRRKVDWLTEKMHARDFTVSAMHGDM K V D E K M 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 7 0 889.45453 P60842;Q14240;P38919 P60842 285 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.005448 153.73 By MS/MS 6.12 2.85 1 1 1 1 1 1 1 1 8 55421000 55421000 0 14386 1097;851 15213 36716;36717;36718;36719;36720;36721;36722;36723 29407;29408;29409;29410;29411 29411 5 604940 0 VDYSGGFEPFSVLR LGNSHQPEKPLVRLRVDYSGGFEPFSVLRF RVDYSGGFEPFSVLRFSQKFVDRVANPKDI R V D L R F 0 1 0 1 0 0 1 2 0 0 1 0 0 2 1 2 0 0 1 2 0 0 14 0 1571.762 P49959 P49959 367 380 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00044626 150.51 By MS/MS 5 0 1 1 98837 98837 0 14387 970 15214 36724 29412;29413 29413 2 991.28 0 VDYYEVLGVQR ______________________________ ______________________________ M V D Q R H 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 2 3 0 0 11 0 1339.6772 O75190 O75190 2 12 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 2 2.4361E-05 159.79 By MS/MS 8.33 1.25 1 1 1 3 3212900 3212900 0 14388 305 15215 36725;36726;36727 29414;29415;29416 29415 3 46321 0 VEAALDSR EEVKNFITRENLEARVEAALDSRKNYNWAI RENLEARVEAALDSRKNYNWAITREGLVVR R V E S R K 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 859.43995 Q9BYN8 Q9BYN8 177 184 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.0053054 124.08 By MS/MS 8.5 0.5 1 1 2 7934900 7934900 0 14389 2374 15216 36728;36729 29417;29418 29418 2 121060 0 VEAAPPGPGPLRR ______________________________ ______________________________ M V E R R T 2 2 0 0 0 0 1 2 0 0 1 0 0 0 4 0 0 0 0 1 0 0 13 1 1315.7361 Q9P1Y5 Q9P1Y5 2 14 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.014022 76.827 By MS/MS By matching 3 0 2 1 1 1261200 1032800 228420 14390 2673 15217 36730;36731 29419 29419 0 18897 29074 VEAAQETVADYQQTIK QLDMAGARVREAQKRVEAAQETVADYQQTI EAAQETVADYQQTIKKYRQLTAHLQDVNRE R V E I K K 3 0 0 1 0 3 2 0 0 1 0 1 0 0 0 0 2 0 1 2 0 0 16 0 1792.8843 Q14203 Q14203 503 518 DCTN1 Dynactin subunit 1 yes yes 2 2.8297E-44 333.44 By MS/MS 3.5 0.5 1 1 2 844230 844230 0 14391 1432 15218 36732;36733 29420 29420 1 33950 0 VEAAQETVADYQQTIKK QLDMAGARVREAQKRVEAAQETVADYQQTI AAQETVADYQQTIKKYRQLTAHLQDVNREL R V E K K Y 3 0 0 1 0 3 2 0 0 1 0 2 0 0 0 0 2 0 1 2 0 0 17 1 1920.9793 Q14203 Q14203 503 519 DCTN1 Dynactin subunit 1 yes yes 3 0.023393 71.08 By MS/MS 3.5 0.5 1 1 2 2734700 2734700 0 14392 1432 15219 36734;36735 29421 29421 1 93988 0 VEAGDVIYIEANSGAVKR LKLDPSIFESLQKERVEAGDVIYIEANSGA GDVIYIEANSGAVKRQGRCDTYATEFDLEA R V E K R Q 3 1 1 1 0 0 2 2 0 2 0 1 0 0 0 1 0 0 1 3 0 0 18 1 1889.9847 Q9Y265 Q9Y265 185 202 RUVBL1 RuvB-like 1 yes yes 2 2.6845E-16 253.06 By MS/MS 6 0 1 1 7982700 7982700 0 14393 2815 15220 36736 29422 29422 1 54875 0 VEAKPEVQSQPPR SGIPPHVKAPVSQPRVEAKPEVQSQPPRVR PRVEAKPEVQSQPPRVREQRPRERPGFPPR R V E P R V 1 1 0 0 0 2 2 0 0 0 0 1 0 0 3 1 0 0 0 2 0 0 13 1 1463.7732 Q9UN86 Q9UN86 278 290 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 3 0.00082897 120.53 By MS/MS By matching 6 0 2 1 1 5443800 5381300 62483 14394 2785 15221 36737;36738 29423 29423 1 36992 64027 VEALPEQVAPESR YTMYSMMNVGQTAEKVEALPEQVAPESRNR EKVEALPEQVAPESRNRIRVRQDLASLPAE K V E S R N 2 1 0 0 0 1 3 0 0 0 1 0 0 0 2 1 0 0 0 2 0 0 13 0 1423.7307 Q96RE7 Q96RE7 319 331 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.007343 96.64 By MS/MS 5 0 1 1 1457400 1457400 0 14395 2220 15222 36739 29424 29424 1 14617 0 VEALQSGGGQER KGVGAIYIRRRPRVRVEALQSGGGQERGMR RVRVEALQSGGGQERGMRSGTVPTPLVVGL R V E E R G 1 1 0 0 0 2 2 3 0 0 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1229.6 Q9Y697 Q9Y697 278 289 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 6.2774E-05 163.45 By MS/MS 7 0 1 1 803900 803900 0 14396 2935 15223 36740 29425 29425 1 12620 0 VEAQLQELQVK VLLQGKGDSEHKRKKVEAQLQELQVKFNEG KRKKVEAQLQELQVKFNEGERVRTELADKV K V E V K F 1 0 0 0 0 3 2 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1283.7085 P35579 P35579 1250 1260 MYH9 Myosin-9 yes yes 2 2.9696E-07 199.68 By MS/MS 2 0 1 1 710540 710540 0 14397 824 15224 36741 29426 29426 1 240330 0 VEAQVYILSK GLVMVKPGSIKPHQKVEAQVYILSKEEGGR KPHQKVEAQVYILSKEEGGRHKPFVSHFMP K V E S K E 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1148.6441 P49411 P49411 352 361 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.0953E-07 181.87 By MS/MS By MS/MS 7 0.707 1 2 1 3 1 24599000 24599000 0 14398 949 15225 36742;36743;36744;36745 29427;29428;29429 29428 3 374400 0 VEATVIEK FTLLGKPLLGKDLVRVEATVIEKTESWPRI LGKDLVRVEATVIEKTESWPRIIMRFRKRK R V E E K T 1 0 0 0 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 887.4964 Q7Z2W9 Q7Z2W9 156 163 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.017699 112.41 By MS/MS 9 0 1 1 0 0 0 14399 1779 15226 36746 29430 29430 1 0 0 VEDLSTCNDLIAK DKTELQNTLRTLSSKVEDLSTCNDLIAKHG SKVEDLSTCNDLIAKHGTALQRSLSELESL K V E A K H 1 0 1 2 1 0 1 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1476.713 P22059 P22059 218 230 OSBP Oxysterol-binding protein 1 yes yes 2 0.026585 93.839 By MS/MS 4 0 1 1 1127100 1127100 0 14400 686 15227 36747 29431 29431 1 106070 0 VEDVPIPIYFPPESQR GAKFKINPKNGQRERVEDVPIPIYFPPESQ EDVPIPIYFPPESQRGLWGGEGWILGQIYA R V E Q R G 0 1 0 1 0 1 2 0 0 2 0 0 0 1 4 1 0 0 1 2 0 0 16 0 1884.9622 Q13084 Q13084 62 77 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.000789 124.48 By MS/MS 8 0 2 2 967250 967250 0 14401 1350 15228 36748;36749 29432;29433;29434;29435;29436;29437 29432 6 12211 0 VEDVSAVEIVGGATR IEVPLYSLLEQTHLKVEDVSAVEIVGGATR VEDVSAVEIVGGATRIPAVKERIAKFFGKD K V E T R I 2 1 0 1 0 0 2 2 0 1 0 0 0 0 0 1 1 0 0 4 0 0 15 0 1500.7784 Q92598 Q92598 332 346 HSPH1 Heat shock protein 105 kDa yes yes 2 1.139E-05 201.04 By MS/MS 4 0 1 1 956840 956840 0 14402 2059 15229 36750 29438 29438 1 90045 0 VEEAEPEEFVVEK TLQKMGKKQNGKSKKVEEAEPEEFVVEKVL KKVEEAEPEEFVVEKVLDRRVVNGKVEYFL K V E E K V 1 0 0 0 0 0 6 0 0 0 0 1 0 1 1 0 0 0 0 3 0 0 13 0 1532.7246 Q13185 Q13185 22 34 CBX3 Chromobox protein homolog 3 yes yes 2 1.6373E-11 234.39 By MS/MS 9 0 1 1 1801900 1801900 0 14403 1362 15230 36751 29439 29439 1 35462 0 VEEEAAQK QLAKKEEELQAALARVEEEAAQKNMALKKI LQAALARVEEEAAQKNMALKKIRELESQIS R V E Q K N 2 0 0 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 8 0 902.43453 P35579 P35579 1092 1099 MYH9 Myosin-9 yes yes 2 0.0019304 143.89 By MS/MS 2 0 1 1 254190 254190 0 14404 824 15231 36752 29440 29440 1 85979 0 VEEEEER KKQELEEICHDLEARVEEEEERCQHLQAEK ICHDLEARVEEEEERCQHLQAEKKKMQQNI R V E E R C 0 1 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 7 0 918.39306 P35580;P35579 P35579 924 930 MYH10;MYH9 Myosin-10;Myosin-9 no no 2 0.0085697 140.98 By MS/MS 2 0 1 1 368040 368040 0 14405 824;825 15232 36753 29441 29441 1 124480 0 VEEGWLSLAK DLEELEGKRTVLNARVEEGWLSLAKARYAM VLNARVEEGWLSLAKARYAMGAKSVGPLQY R V E A K A 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 1 0 1 0 1 0 0 10 0 1130.5972 Q96NT0 Q96NT0 35 44 CCDC115 Coiled-coil domain-containing protein 115 yes yes 2 0.00021808 145.9 By MS/MS 9 0 1 1 272500 272500 0 14406 2204 15233 36754 29442 29442 1 5362.8 0 VEEINPEYMLEK SAFHLTYNMVLNLLRVEEINPEYMLEKSFY LLRVEEINPEYMLEKSFYQFQHYRAIPGVV R V E E K S 0 0 1 0 0 0 4 0 0 1 1 1 1 0 1 0 0 0 1 1 0 0 12 0 1492.7119 P42285 P42285 576 587 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.0073097 96.82 By MS/MS 3.5 0.5 1 1 2 576890 576890 0 14407 878 15234 36755;36756 29443 29443 1 50200 0 VEEISPNIR ASAFTEEQAVLYNQRVEEISPNIRYCAYNI VLYNQRVEEISPNIRYCAYNIGDQSAINEL R V E I R Y 0 1 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1055.5611 Q9UHB9 Q9UHB9 237 245 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.027094 85.862 By MS/MS By matching 5.33 0.471 2 1 2 1 9687200 9612000 75240 14408 2728 15235 36757;36758;36759 29444 29444 1 93090 63186 VEEKPPPAPSIATKPVR PPETLTDPPGVCQEKVEEKPPPAPSIATKP EKPPPAPSIATKPVRTGPIKPQAIKTEETK K V E V R T 2 1 0 0 0 0 2 0 0 1 0 2 0 0 5 1 1 0 0 2 0 0 17 2 1815.0254 Q9Y520 Q9Y520 2864 2880 PRRC2C Protein PRRC2C yes yes 3 0.018413 82.707 By MS/MS 1 0 1 1 0 0 0 14409 2905 15236 36760 29445 29445 1 0 0 VEENFLK LNREGKQKADKNRARVEENFLKLTHVQRQE KADKNRARVEENFLKLTHVQRQEAAQSRRE R V E L K L 0 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 877.45453 Q96A33 Q96A33 413 419 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 0.030363 104.45 By MS/MS 6.5 0.5 1 1 2 3614900 3614900 0 14410 2101 15237 36761;36762 29446 29446 1 27974 0 VEEQEPELTSTPNFVVEVIK PPTFDGEEEPSQGQKVEEQEPELTSTPNFV PELTSTPNFVVEVIKNDDGKKALVLDCHYP K V E I K N 0 0 1 0 0 1 5 0 0 1 1 1 0 1 2 1 2 0 0 4 0 0 20 0 2286.1631 Q07021 Q07021 155 174 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 3 2.9485E-05 121.51 By MS/MS 8 0 1 1 193130 193130 0 14411 1299 15238 36763 29447 29447 1 2438.2 0 VEEQEPELTSTPNFVVEVIKNDDGK PPTFDGEEEPSQGQKVEEQEPELTSTPNFV TPNFVVEVIKNDDGKKALVLDCHYPEDEVG K V E G K K 0 0 2 2 0 1 5 1 0 1 1 2 0 1 2 1 2 0 0 4 0 0 25 1 2815.3763 Q07021 Q07021 155 179 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 3 0.036612 51.31 By MS/MS 8 0 1 1 87828 87828 0 14412 1299 15239 36764 29448 29448 1 1108.8 0 VEEQEPELTSTPNFVVEVIKNDDGKK PPTFDGEEEPSQGQKVEEQEPELTSTPNFV PNFVVEVIKNDDGKKALVLDCHYPEDEVGQ K V E K K A 0 0 2 2 0 1 5 1 0 1 1 3 0 1 2 1 2 0 0 4 0 0 26 2 2943.4713 Q07021 Q07021 155 180 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 3;4 3.1142E-05 92.913 By MS/MS 8.25 0.433 3 1 4 1887500 1887500 0 14413 1299 15240 36765;36766;36767;36768 29449;29450;29451;29452;29453 29450 5 24531 0 VEERDPPR EVSSWRRADDRKDDRVEERDPPRRVPPPAL DDRKDDRVEERDPPRRVPPPALSRDRERDR R V E P R R 0 2 0 1 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 8 1 996.49886 Q14152 Q14152 1321 1328 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.023593 87.323 By MS/MS 5 2 1 1 2 1604000 1604000 0 14414 1422 15241 36769;36770 29454;29455 29455 2 26127 0 VEESYAMPTK YAQYVHNLCNSLSIKVEESYAMPTKTIEVL SLSIKVEESYAMPTKTIEVLQLQDQGSKML K V E T K T 1 0 0 0 0 0 2 0 0 0 0 1 1 0 1 1 1 0 1 1 0 0 10 0 1153.5325 Q96GC5 Q96GC5 121 130 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2 2.1211E-05 167.12 By MS/MS 9 0 1 1 1003000 1003000 0 14415 2158 15242 36771 29456 29456 1 19740 0 VEFILEQMR ELQVETYGSMEKKERVEFILEQMRLCLAVK MEKKERVEFILEQMRLCLAVKDYIRTQIIS R V E M R L 0 1 0 0 0 1 2 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 9 0 1163.6009 O00232 O00232 183 191 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.00048455 143.7 By MS/MS 6 0 1 1 0 0 0 14416 94 15243 36772 29457 29457 1 0 0 VEFMDDTSR VLGRTGSQGQCTQVRVEFMDDTSRSIIRNV QCTQVRVEFMDDTSRSIIRNVKGPVREGDV R V E S R S 0 1 0 2 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 9 0 1098.4652 P62857 P62857 32 40 RPS28 40S ribosomal protein S28 yes yes 2 0.0033587 112.11 By MS/MS 10 0 2 2 4135200 4135200 0 14417 1178 15244;15245 36773;36774 29458;29459 29459 683 2 222870 0 VEGDIWALQK KDITHGNRQMTVIRKVEGDIWALQKDVEDF TVIRKVEGDIWALQKDVEDFLSPLLGKTPV K V E Q K D 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1157.6081 Q13405 Q13405 113 122 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 0.00025045 143.7 By MS/MS 10 0 1 1 137420 137420 0 14418 1378 15246 36775 29460 29460 1 7406.7 0 VEGDNDKKNPR VIQEIVDKSGVVRVRVEGDNDKKNPREEGM VRVRVEGDNDKKNPREEGMVPFIFVGTREN R V E P R E 0 1 2 2 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 11 2 1270.6266 P51116 P51116 328 338 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.016762 84.31 By MS/MS 3 0 1 1 0 0 0 14419 988 15247 36776 29461 29461 1 0 0 VEGGTPLFTLR ANGVIEALLVPDGGKVEGGTPLFTLRKTGA DGGKVEGGTPLFTLRKTGAAPAKAKPAEAP K V E L R K 0 1 0 0 0 0 1 2 0 0 2 0 0 1 1 0 2 0 0 1 0 0 11 0 1188.6503 P36957 P36957 134 144 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 1.0235E-05 172.98 By MS/MS By MS/MS 6 0 2 1 1 3748700 3633400 115260 14420 842 15248 36777;36778 29462;29463 29463 2 24977 118110 VEGTDGHEAFLLTEGSEEKR VLPSGIGHTTNCFLRVEGTDGHEAFLLTEG GHEAFLLTEGSEEKRSAKTVNQLAHALHQD R V E K R S 1 1 0 1 0 0 5 3 1 0 2 1 0 1 0 1 2 0 0 1 0 0 20 1 2203.0393 O95140 O95140 136 155 MFN2 Mitofusin-2 yes yes 3 4.8821E-05 113.14 By MS/MS 5 0 1 1 1136300 1136300 0 14421 386 15249 36779 29464 29464 1 11397 0 VEGTDVTGIEEVVIPK ARSCRFYSGSATLSKVEGTDVTGIEEVVIP EGTDVTGIEEVVIPKKKTWDKVAVLQALAS K V E P K K 0 0 0 1 0 0 3 2 0 2 0 1 0 0 1 0 2 0 0 4 0 0 16 0 1683.8931 Q96EY7 Q96EY7 46 61 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 4.6372E-07 212.59 By MS/MS By MS/MS 5.4 1.02 1 2 1 1 4 1 11755000 11695000 60179 14422 2151 15250 36780;36781;36782;36783;36784 29465;29466;29467;29468 29466 3 137820 50538 VEHHDHAVVSGR GDAACFYDIKLGRRRVEHHDHAVVSGRLAG RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R V E G R L 1 1 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1341.6538 O95831 O95831 452 463 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3;4 5.7768E-05 161.93 By MS/MS 5.25 0.433 3 1 4 4935700 4935700 0 14423 429 15251 36785;36786;36787;36788 29469;29470;29471 29469 3 48897 0 VEIATLTR VLNKTMDVSKLSAEKVEIATLTRENGKTVI SKLSAEKVEIATLTRENGKTVIRVLKQKEV K V E T R E 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 8 0 901.52328 P25789 P25789 211 218 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.0053054 124.08 By MS/MS By matching 8 0 2 1 1 2090200 2000400 89876 14424 727 15252 36789;36790 29472 29472 1 25254 121280 VEILANDQGNR LGTTYSCVGVFQQGRVEILANDQGNRTTPS QQGRVEILANDQGNRTTPSYVAFTDTERLV R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P17066;P48741 P17066 28 38 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 2 1.9079E-13 221.5 By MS/MS By MS/MS 6.5 1.71 1 3 3 2 1 1 1 7 5 11473000 9641500 1831500 14425 639 15253 36791;36792;36793;36794;36795;36796;36797;36798;36799;36800;36801;36802 29473;29474;29475;29476;29477;29478 29473 6 211330 1771000 VEILPVPYVTEASR RPLTRRVQLLRPLSRVEILPVPYVTEASRL RVEILPVPYVTEASRLTVLLPLAAAERDLA R V E S R L 1 1 0 0 0 0 2 0 0 1 1 0 0 0 2 1 1 0 1 3 0 0 14 0 1571.8559 Q8IZ52 Q8IZ52 494 507 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.014319 88.021 By MS/MS 4.5 0.5 1 1 2 1354000 1354000 0 14426 1890 15254 36803;36804 29479 29479 1 115460 0 VEKIPGGIIEDSCVLR EENGRKEIDIKKYARVEKIPGGIIEDSCVL EKIPGGIIEDSCVLRGVMINKDVTHPRMRR R V E L R G 0 1 0 1 1 0 2 2 0 3 1 1 0 0 1 1 0 0 0 2 0 0 16 1 1783.9502 P49368 P49368 201 216 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.001924 175.27 By MS/MS 6 0.816 2 2 2 6 33259000 33259000 0 14427 947 15255 36805;36806;36807;36808;36809;36810 29480;29481;29482;29483;29484;29485;29486;29487;29488;29489 29480 10 278360 0 VELCSFSGYK ______________________________ ______________________________ K V E Y K I 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 0 0 10 0 1188.5485 P83731 P83731 3 12 RPL24 60S ribosomal protein L24 yes yes 2 0.021977 85.862 By MS/MS 9 0 1 1 533940 533940 0 14428 1241 15256 36811 29490 29490 1 10508 0 VELEAVSEQKRNIMK CLHVEEYQNLVKDLRVELEAVSEQKRNIMK VELEAVSEQKRNIMKDMMKLELDLHGLREE R V E M K D 1 1 1 0 0 1 3 0 0 1 1 2 1 0 0 1 0 0 0 2 0 0 15 2 1772.9455 Q8TBY8 Q8TBY8 334 348 PMFBP1 Polyamine-modulated factor 1-binding protein 1 yes yes 3 0.053705 48.532 By MS/MS 6 0 1 1 0 0 0 14429 1986 15257 36812 29491 29491 967 1 0 0 VELMFPLLLLLLPFLLYMAAPQIRK ______________________________ LLPFLLYMAAPQIRKMLSSGVCTSTVQLPG M V E R K M 2 1 0 0 0 1 1 0 0 1 9 1 2 2 3 0 0 0 1 1 0 0 25 1 2941.7305 Q8TC12 Q8TC12 2 26 RDH11 Retinol dehydrogenase 11 yes yes 7 0.054663 6.5761 By MS/MS 2 0 1 1 566530 566530 0 14430 1988 15258 36813 29492 29492 0 191620 0 VELQQGLR VGFSSQLYGYALLGKVELQQGLRAVYHNMP GYALLGKVELQQGLRAVYHNMPLIWKPGYL K V E L R A 0 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 941.52943 Q92552 Q92552 234 241 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.018237 101.6 By MS/MS 7 0 1 1 9982500 9982500 0 14431 2054 15259 36814 29493 29493 1 156710 0 VELSTVNVR ENTKKDLLGIIKGMKVELSTVNVRTTKPPK IIKGMKVELSTVNVRTTKPPKRRPLKSLEA K V E V R T 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 3 0 0 9 0 1015.5662 Q92665 Q92665 108 116 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.049645 76.1 By MS/MS 7.5 0.5 1 1 2 5492600 5492600 0 14432 2067 15260 36815;36816 29494 29494 1 84606 0 VELVPPTPAEIPR TYSKPRLATFWYYAKVELVPPTPAEIPRAI AKVELVPPTPAEIPRAIQSLKKIVNSAQTG K V E P R A 1 1 0 0 0 0 2 0 0 1 1 0 0 0 4 0 1 0 0 2 0 0 13 0 1416.7977 O75964 O75964 36 48 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 0.0075008 96.171 By MS/MS 10 0 1 1 3583200 3583200 0 14433 357 15261 36817 29495;29496 29496 2 193120 0 VEMALEALR AAKVESEQHGDRLPRVEMALEALRNVIKYN GDRLPRVEMALEALRNVIKYNPGSESECIG R V E L R N 2 1 0 0 0 0 2 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 9 0 1030.5481 O75165 O75165 1749 1757 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 6.31E-05 169.12 By MS/MS 2.5 0.5 1 1 2 1292200 1292200 0 14434 302 15262 36818;36819 29497 29497 1 159570 0 VENMVDQLLR DTPLIYKAVPSWFVRVENMVDQLLRNNDLC SWFVRVENMVDQLLRNNDLCYWVPELVREK R V E L R N 0 1 1 1 0 1 1 0 0 0 2 0 1 0 0 0 0 0 0 2 0 0 10 0 1215.6282 P41252 P41252 419 428 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 8.1842E-06 175.65 By MS/MS 3.5 0.957 1 2 2 1 6 4358000 4358000 0 14435 871 15263;15264 36820;36821;36822;36823;36824;36825 29498;29499;29500;29501;29502 29500 460 5 179680 0 VENYPEVIR LARLKSNYQLGELVKVENYPEVIRLIANFT LGELVKVENYPEVIRLIANFTVTSLQHWEF K V E I R L 0 1 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 9 0 1117.5768 Q9UIA9 Q9UIA9 349 357 XPO7 Exportin-7 yes yes 2 0.042503 89.029 By MS/MS 4 0 1 1 0 0 0 14436 2740 15265 36826 29503 29503 1 0 0 VEPAVIEAQNAVK VIADKQMSVKEDLDKVEPAVIEAQNAVKSI DKVEPAVIEAQNAVKSIKKQHLVEVRSMAN K V E V K S 3 0 1 0 0 1 2 0 0 1 0 1 0 0 1 0 0 0 0 3 0 0 13 0 1366.7456 Q14204 Q14204 3285 3297 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0009703 126.66 By MS/MS 1.5 0.5 1 1 2 439860 439860 0 14437 1433 15266 36827;36828 29504 29504 1 124730 0 VEPFVCAQCR SVIDSQGKSCASLLRVEPFVCAQCRTDFTP ASLLRVEPFVCAQCRTDFTPHWKQEKNGKI R V E C R T 1 1 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 10 0 1264.5693 Q8WXI9 Q8WXI9 415 424 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0012962 117.89 By MS/MS 5 0 1 1 811590 811590 0 14438 2040 15267 36829 29505;29506 29505 2 8139.8 0 VEPGLGADNSVVR ASKIVGPSGAAVPCKVEPGLGADNSVVRFL CKVEPGLGADNSVVRFLPREEGPYEVEVTY K V E V R F 1 1 1 1 0 0 1 2 0 0 1 0 0 0 1 1 0 0 0 3 0 0 13 0 1311.6783 P21333 P21333 1020 1032 FLNA Filamin-A yes yes 2 0.039596 84.687 By MS/MS 2 0.816 1 1 1 3 1463700 1463700 0 14439 677 15268 36830;36831;36832 29507;29508 29507 2 371430 0 VEPLRNELQK KWAIAQLNYADMLKRVEPLRNELQKLEDDA DMLKRVEPLRNELQKLEDDAKDNQQKANEV R V E Q K L 0 1 1 0 0 1 2 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 10 1 1224.6826 Q14204 Q14204 3409 3418 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.030482 81.525 By MS/MS 2 0.816 1 1 1 3 1439800 1439800 0 14440 1433 15269 36833;36834;36835 29509 29509 1 383130 0 VEQHVVDGK LDLHVIYDVSHNIAKVEQHVVDGKERTLLV SHNIAKVEQHVVDGKERTLLVHRKGSTRAF K V E G K E 0 0 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 3 0 0 9 0 1009.5193 Q9Y3I0 Q9Y3I0 358 366 RTCB tRNA-splicing ligase RtcB homolog yes yes 2 0.023776 87.298 By MS/MS 6 0 1 1 795620 795620 0 14441 2878 15270 36836 29510 29510 1 5469.3 0 VEQHVVDGKER LDLHVIYDVSHNIAKVEQHVVDGKERTLLV NIAKVEQHVVDGKERTLLVHRKGSTRAFPP K V E E R T 0 1 0 1 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 3 0 0 11 1 1294.663 Q9Y3I0 Q9Y3I0 358 368 RTCB tRNA-splicing ligase RtcB homolog yes yes 3 0.0023329 107.39 By MS/MS 6.5 0.5 1 1 2 1343700 1343700 0 14442 2878 15271 36837;36838 29511 29511 1 10665 0 VEQNAAPSHTK CTGARQLQDAAAKQKVEQNAAPSHTKFSIY AKQKVEQNAAPSHTKFSIYPPIPGEESSLR K V E T K F 2 0 1 0 0 1 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1180.5836 P82912 P82912 49 59 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 1.3619E-05 169.82 By MS/MS 9.5 0.5 2 2 4 1357200 1357200 0 14443 1234 15272 36839;36840;36841;36842 29512;29513;29514 29513 3 49766 0 VEQVLSLEPQHELK ______________________________ KVEQVLSLEPQHELKFRGPFTDVVTTNLKL K V E L K F 0 0 0 0 0 2 3 0 1 0 3 1 0 0 1 1 0 0 0 2 0 0 14 0 1647.8832 O95292 O95292 4 17 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2;3 1.807E-09 174.9 By MS/MS 8 0 2 2 5999800 5999800 0 14444 401 15273 36843;36844 29515;29516 29516 1 75747 0 VERADGYEPPVQESV GSSSGKATGDETGAKVERADGYEPPVQESV VERADGYEPPVQESV_______________ K V E S V - 1 1 0 1 0 1 3 1 0 0 0 0 0 0 2 1 0 0 1 3 0 0 15 1 1673.7897 P61247 P61247 250 264 RPS3A 40S ribosomal protein S3a yes yes 2 0.0020767 167.03 By MS/MS 8.5 0.5 1 1 2 17914000 17914000 0 14445 1118 15274 36845;36846 29517 29517 1 230930 0 VESEQHGDR AQYLHTFMAITHAAKVESEQHGDRLPRVEM ITHAAKVESEQHGDRLPRVEMALEALRNVI K V E D R L 0 1 0 1 0 1 2 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 9 0 1055.4632 O75165 O75165 1737 1745 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00065616 125.71 By MS/MS 2 0 1 1 50908 50908 0 14446 302 15275 36847 29518 29518 1 17219 0 VESGGPGTSAASAR KEAAKLGLSVFTHHRVESGGPGTSAASARR RVESGGPGTSAASARRKPRAEDQTESSCES R V E A R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 1 3 1 0 0 1 0 0 14 0 1245.5949 Q9BU76 Q9BU76 153 166 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 2 0.0016091 114.24 By MS/MS 7.5 0.5 1 1 2 433900 433900 0 14447 2322 15276 36848;36849 29519 29519 1 6035 0 VESHFDLELR GRHSKGVAKTVTKQRVESHFDLELRAAVMH VTKQRVESHFDLELRAAVMHDILDMMPEGI R V E L R A 0 1 0 1 0 0 2 0 1 0 2 0 0 1 0 1 0 0 0 1 0 0 10 0 1243.6197 Q6P2Q9 Q6P2Q9 677 686 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.02414 84.817 By MS/MS 2 0 1 1 171270 171270 0 14448 1708 15277 36850 29520 29520 1 57931 0 VESLEQEAANER PKADKKAVIQHFQEKVESLEQEAANERQQL QEKVESLEQEAANERQQLVETHMARVEAML K V E E R Q 2 1 1 0 0 1 4 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1373.6423 P05067 P05067 439 450 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 0.00091972 126.66 By MS/MS 4 0 1 1 1086800 1086800 0 14449 483 15278 36851 29521 29521 1 102270 0 VESPVLPPVLVPR SKQKEVCINPYHYKRVESPVLPPVLVPRHN KRVESPVLPPVLVPRHNEFNPQHSLLVQFR R V E P R H 0 1 0 0 0 0 1 0 0 0 2 0 0 0 4 1 0 0 0 4 0 0 13 0 1400.8391 Q99717;Q15797 Q99717 131 143 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 yes no 2 0.0047247 104.42 By MS/MS 6 0 1 1 1152500 1152500 0 14450 1533 15279 36852 29522 29522 1 7922.8 0 VETDHIVAAVGLEPNVELAK VSSGKLLIKLKDGRKVETDHIVAAVGLEPN IVAAVGLEPNVELAKTGGLEIDSDFGGFRV K V E A K T 3 0 1 1 0 0 3 1 1 1 2 1 0 0 1 0 1 0 0 4 0 0 20 0 2103.1212 O95831 O95831 389 408 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 1.9028E-05 127.49 By MS/MS 5 0 1 1 1316200 1316200 0 14451 429 15280 36853 29523 29523 1 13201 0 VETFSGVYK KVHLDKAQQNNVEHKVETFSGVYKKLTGKD NNVEHKVETFSGVYKKLTGKDVNFEFPEFQ K V E Y K K 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 9 0 1028.5179 P62081 P62081 170 178 RPS7 40S ribosomal protein S7 yes yes 2 0.054423 87.181 By matching By MS/MS 9 0 2 1 1 16217000 16152000 64556 14452 1138 15281 36854;36855 29524 29524 1 317880 147210 VETFSGVYKK KVHLDKAQQNNVEHKVETFSGVYKKLTGKD NVEHKVETFSGVYKKLTGKDVNFEFPEFQL K V E K K L 0 0 0 0 0 0 1 1 0 0 0 2 0 1 0 1 1 0 1 2 0 0 10 1 1156.6128 P62081 P62081 170 179 RPS7 40S ribosomal protein S7 yes yes 2;3 0.00052174 150.36 By MS/MS 9 0 2 2 5985000 5985000 0 14453 1138 15282 36856;36857 29525;29526 29526 2 117790 0 VETPVLPPVLVPR SKQKEVCINPYHYRRVETPVLPPVLVPRHS RRVETPVLPPVLVPRHSEYNPQLSLLAKFR R V E P R H 0 1 0 0 0 0 1 0 0 0 2 0 0 0 4 0 1 0 0 4 0 0 13 0 1414.8548 O15198;P84022;Q15796 O15198 134 146 SMAD9;SMAD3;SMAD2 Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 2 yes no 2 0.001357 119.68 By MS/MS 6 0 1 1 1008600 1008600 0 14454 169 15283 36858 29527 29527 1 6933.5 0 VETYLNENLR QLLNERIKLEGIITRVETYLNENLRKRLDQ GIITRVETYLNENLRKRLDQVEQELNELRE R V E L R K 0 1 2 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 10 0 1249.6303 Q9UQE7 Q9UQE7 828 837 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 7.6739E-08 194.94 By MS/MS By matching 2.8 1.6 2 1 1 1 4 1 3061200 2960700 100480 14455 2807 15284 36859;36860;36861;36862;36863 29528 29528 1 145900 100480 VEVAVESQR QDGYKLHGRTIRLARVEVAVESQRRL____ TIRLARVEVAVESQRRL_____________ R V E Q R R 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 9 0 1015.5298 Q8TAA5 Q8TAA5 215 223 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.0013644 129.38 By MS/MS 8.5 0.5 1 1 2 1524900 1524900 0 14456 1973 15285 36864;36865 29529;29530 29529 2 26467 0 VEVFEHAVNNTAGDDLAK LRMAPDYDHLTLMQKVEVFEHAVNNTAGDD FEHAVNNTAGDDLAKLLWLKSPSSEVWFDR K V E A K L 3 0 2 2 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 3 0 0 18 0 1927.9276 P42345 P42345 2284 2301 MTOR Serine/threonine-protein kinase mTOR yes yes 3 0.00067494 112.91 By MS/MS 2 0 1 1 681330 681330 0 14457 879 15286 36866 29531 29531 1 230450 0 VEVTEFEDIK LLGEEDEEALHYLTRVEVTEFEDIKSGYRI HYLTRVEVTEFEDIKSGYRIDFYFDENPYF R V E I K S 0 0 0 1 0 0 3 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1207.5972 Q01105;P0DME0 Q01105 123 132 SET;SETSIP Protein SET;Protein SETSIP yes no 2 0.0040217 107.79 By MS/MS 7 0 1 1 1680300 1680300 0 14458 549 15287 36867 29532 29532 1 26378 0 VEYSEEELKTHISK KRKHDNEGSGSKRPKVEYSEEELKTHISKG KVEYSEEELKTHISKGTLGKFTVPMLKEAC K V E S K G 0 0 0 0 0 0 4 0 1 1 1 2 0 0 0 2 1 0 1 1 0 0 14 1 1690.8414 P12956 P12956 557 570 XRCC6 X-ray repair cross-complementing protein 6 yes yes 4 0.032208 59.185 By MS/MS 5 0 1 1 1606800 1606800 0 14459 596 15288 36868 29533 29533 1 16116 0 VEYTLGEESEAPGQR LPEGQDIGAFVAEQKVEYTLGEESEAPGQR VEYTLGEESEAPGQRALPSEELNRQLEKLL K V E Q R A 1 1 0 0 0 1 4 2 0 0 1 0 0 0 1 1 1 0 1 1 0 0 15 0 1663.7689 Q04637 Q04637 1422 1436 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 9.4604E-33 298.84 By MS/MS 3.75 1.98 1 2 1 1 1 1 1 8 50065000 50065000 0 14460 1291 15289 36869;36870;36871;36872;36873;36874;36875;36876 29534;29535;29536;29537;29538 29537 5 13892000 0 VFADYEAYVK FKDIINMLFYHDRFKVFADYEAYVKCQDKV HDRFKVFADYEAYVKCQDKVSQLYMNPKAW K V F V K C 2 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 2 2 0 0 10 0 1203.5812 P06737 P06737 774 783 PYGL Glycogen phosphorylase, liver form yes yes 2 0.027904 93.551 By MS/MS 4 0 1 1 554500 554500 0 14461 501 15290 36877 29539 29539 1 52183 0 VFAEYPGSSAQLR GFMDFICSLVTKSVKVFAEYPGSSAQLRVL VKVFAEYPGSSAQLRVLLAFYASTIVSALV K V F L R V 2 1 0 0 0 1 1 1 0 0 1 0 0 1 1 2 0 0 1 1 0 0 13 0 1423.7096 Q9H583 Q9H583 202 214 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 1.1733E-07 206.49 By MS/MS 2 0 1 1 1020600 1020600 0 14462 2451 15291 36878 29540 29540 1 345190 0 VFANPEDCVAFGK MLMSTATAFYRLTRKVFANPEDCVAFGKGE RKVFANPEDCVAFGKGENAKKYLRTDDRVE K V F G K G 2 0 1 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 0 2 0 0 13 0 1452.6708 P10620 P10620 43 55 MGST1 Microsomal glutathione S-transferase 1 yes yes 2 0.00039015 143 By MS/MS 9.5 0.5 1 1 2 1092900 1092900 0 14463 566 15292 36879;36880 29541 29541 1 57105 0 VFASELNAGIIK WDSLRSGPASTFNDRVFASELNAGIIKTDQ NDRVFASELNAGIIKTDQNYEKMMFKEALK R V F I K T 2 0 1 0 0 0 1 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 12 0 1260.7078 Q9P2J5 Q9P2J5 796 807 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 1.4385E-33 300.43 By MS/MS 3 1.41 1 1 1 1 1 5 4054600 4054600 0 14464 2684 15293 36881;36882;36883;36884;36885 29542;29543;29544 29542 2 223180 0 VFCSHCGNK LRCHGCFKTTSDMSRVFCSHCGNKTLKKVS TSDMSRVFCSHCGNKTLKKVSVTVSDDGTL R V F N K T 0 0 1 0 2 0 0 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1107.459 Q9ULX3 Q9ULX3 283 291 NOB1 RNA-binding protein NOB1 yes yes 2 0.0044905 110.12 By MS/MS 7 0 1 1 272760 272760 0 14465 2777 15294 36886 29545 29545 1 4281.8 0 VFDAIMNFK LPRTFCQLILDPIFKVFDAIMNFKKEETAK LDPIFKVFDAIMNFKKEETAKLIEKLDIKL K V F F K K 1 0 1 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 9 0 1083.5423 P13639 P13639 300 308 EEF2 Elongation factor 2 yes yes 2 0.0023364 117.04 By MS/MS 4.33 0.471 2 1 3 1690300 1690300 0 14466 602 15295;15296 36887;36888;36889 29546;29547 29547 289 2 144990 0 VFDESLNFR TPGSAIDTREELVDRVFDESLNFRKIPPLV EELVDRVFDESLNFRKIPPLVHSKTPEGNN R V F F R K 0 1 1 1 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 9 0 1125.5455 Q5SW79 Q5SW79 1358 1366 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0013614 129.42 By MS/MS 2.5 0.5 1 1 2 833890 833890 0 14467 1623 15297 36890;36891 29548 29548 1 244670 0 VFDIPSDECIK LKNADPERVENQIEKVFDIPSDECIKISAK QIEKVFDIPSDECIKISAKLGTNVESVLQA K V F I K I 0 0 0 2 1 0 1 0 0 2 0 1 0 1 1 1 0 0 0 1 0 0 11 0 1321.6224 Q8N442 Q8N442 213 223 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.034856 81.594 By MS/MS 5 0 1 1 709600 709600 0 14468 1914 15298 36892 29549 29549 0 7117 0 VFDKDGNGYISAAELR MKDTDSEEEIREAFRVFDKDGNGYISAAEL FDKDGNGYISAAELRHVMTNLGEKLTDEEV R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 P0DP25;P0DP24;P0DP23 P0DP25 92 107 yes no 2;3 0.00019608 212.03 By MS/MS 9.5 0.5 2 2 4 2015100 2015100 0 14469 553 15299 36893;36894;36895;36896 29550;29551;29552 29551 3 62917 0 VFDLLNR ELQVYATFFEIYSGKVFDLLNRKTKLRVLE FFEIYSGKVFDLLNRKTKLRVLEDGKQQVQ K V F N R K 0 1 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 7 0 875.4865 O00139 O00139 374 380 KIF2A Kinesin-like protein KIF2A yes yes 2 0.032667 102.71 By MS/MS 4.5 0.5 1 1 2 736970 736970 0 14470 82 15300 36897;36898 29553 29553 1 54314 0 VFDLQFSTDSPR QNDDEKERLQRRRSRVFDLQFSTDSPRLLA RSRVFDLQFSTDSPRLLASPSSRSIDISAT R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 Q15003 Q15003 72 83 NCAPH Condensin complex subunit 2 yes yes 2 2.9947E-17 217.22 By MS/MS 4 0 1 1 0 0 0 14471 1468 15301 36899 29554 29554 1 0 0 VFDMLNR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI IIVGTPGRVFDMLNRRYLSPKYIKMFVLDE R V F N R R 0 1 1 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 7 0 893.44292 P60842;Q14240 P60842 162 168 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.0055896 153.15 By MS/MS 5.26 2.75 2 2 2 2 2 2 2 2 2 1 19 131070000 131070000 0 14472 1097 15302;15303 36900;36901;36902;36903;36904;36905;36906;36907;36908;36909;36910;36911;36912;36913;36914;36915;36916;36917;36918 29555;29556;29557;29558;29559;29560;29561;29562 29559 628 8 2586000 0 VFDMLNRR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI IVGTPGRVFDMLNRRYLSPKYIKMFVLDEA R V F R R Y 0 2 1 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 8 1 1049.544 P60842;Q14240 P60842 162 169 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.053622 104.45 By MS/MS 8 1.41 1 1 1 1 1 5 204740000 204740000 0 14473 1097 15304 36919;36920;36921;36922;36923 29563 29563 1 1480300 0 VFDPVPVGVTK ILPLHSQIPREEQRKVFDPVPVGVTKVILS EQRKVFDPVPVGVTKVILSTNIAETSITIN K V F T K V 0 0 0 1 0 0 0 1 0 0 0 1 0 1 2 0 1 0 0 4 0 0 11 0 1156.6492 Q08211 Q08211 698 708 DHX9 ATP-dependent RNA helicase A yes yes 2 0.01419 88.681 By MS/MS 3 1.41 1 1 1 1 1 5 2544600 2544600 0 14474 1307 15305 36924;36925;36926;36927;36928 29564 29564 1 145450 0 VFEHDSVELNCK LKQISSNKCFGGLQKVFEHDSVELNCKMKF LQKVFEHDSVELNCKMKFAVYLPPKAETGK K V F C K M 0 0 1 1 1 0 2 0 1 0 1 1 0 1 0 1 0 0 0 2 0 0 12 0 1475.6715 P10768 P10768 18 29 ESD S-formylglutathione hydrolase yes yes 2;3 2.0973E-12 223.87 By MS/MS 8 0 2 2 2238400 2238400 0 14475 568 15306 36929;36930 29565;29566 29565 2 28260 0 VFEPNEEALGVVLHK RKRTEFAGDKFKEEKVFEPNEEALGVVLHK VFEPNEEALGVVLHKDSKWYQQWKDFKENN K V F H K D 1 0 1 0 0 0 3 1 1 0 2 1 0 1 1 0 0 0 0 3 0 0 15 0 1679.8883 O43615 O43615 223 237 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 0.00042459 131.06 By MS/MS 7.33 0.471 2 1 3 4767800 4767800 0 14476 221 15307 36931;36932;36933 29567;29568 29568 2 73306 0 VFEPNEEALGVVLHKDSK RKRTEFAGDKFKEEKVFEPNEEALGVVLHK PNEEALGVVLHKDSKWYQQWKDFKENNVVF K V F S K W 1 0 1 1 0 0 3 1 1 0 2 2 0 1 1 1 0 0 0 3 0 0 18 1 2010.0422 O43615 O43615 223 240 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 4 0.004722 84.046 By MS/MS 7 0 1 1 2489500 2489500 0 14477 221 15308 36934 29569 29569 1 39080 0 VFESIGK ______________________________ ______________________________ K V F G K F 0 0 0 0 0 0 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 7 0 778.4225 P35232 P35232 5 11 PHB Prohibitin yes yes 2 0.010289 134.66 By MS/MS By matching 8 0 2 1 1 22001000 21866000 134400 14478 814 15309 36935;36936 29570 29570 1 276060 181360 VFEVNASNLEK KKIEKEIQQKWDTERVFEVNASNLEKQTSK DTERVFEVNASNLEKQTSKGKYFVTFPYPY R V F E K Q 1 0 2 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 2 0 0 11 0 1248.635 Q9P2J5 Q9P2J5 29 39 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 2.0807E-09 217.02 By MS/MS 4.17 2.91 1 1 1 1 1 1 6 12183000 12183000 0 14479 2684 15310 36937;36938;36939;36940;36941;36942 29571;29572 29571 2 440980 0 VFEVSLADLQNDEVAFR RTQGTKIASDGLKGRVFEVSLADLQNDEVA EVSLADLQNDEVAFRKFKLITEDVQGKNCL R V F F R K 2 1 1 2 0 1 2 0 0 0 2 0 0 2 0 1 0 0 0 3 0 0 17 0 1950.9687 P61247 P61247 66 82 RPS3A 40S ribosomal protein S3a yes yes 2 5.577E-07 211.83 By MS/MS 8 0 1 1 355700 355700 0 14480 1118 15311 36943 29573;29574 29573 2 4490.7 0 VFFDVDIGGER HPSPQAKPSNPSNPRVFFDVDIGGERVGRI SNPRVFFDVDIGGERVGRIVLELFADIVPK R V F E R V 0 1 0 2 0 0 1 2 0 1 0 0 0 2 0 0 0 0 0 2 0 0 11 0 1252.6088 Q08752 Q08752 18 28 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.0040602 106.4 By MS/MS 7 0 1 1 169840 169840 0 14481 1312 15312 36944 29575 29575 1 2666.2 0 VFFINEEAK SLPRSWTYGITRGGRVFFINEEAKSTTWLH ITRGGRVFFINEEAKSTTWLHPVTGEAVVT R V F A K S 1 0 1 0 0 0 2 0 0 1 0 1 0 2 0 0 0 0 0 1 0 0 9 0 1095.5601 Q9HAU0 Q9HAU0 26 34 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 2 0.0022692 117.89 By MS/MS 3 0 1 1 264930 264930 0 14482 2493 15313 36945 29576 29576 1 4847.5 0 VFFNILEEAR PWESVTFTALGTDRKVFFNILEEARELALQ GTDRKVFFNILEEARELALQQEEGKTVMYT K V F A R E 1 1 1 0 0 0 2 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 10 0 1236.6503 Q9Y276 Q9Y276 146 155 BCS1L Mitochondrial chaperone BCS1 yes yes 2 2.2788E-06 179.51 By MS/MS 7 0 1 1 220260 220260 0 14483 2817 15314 36946 29577 29577 1 3457.7 0 VFGAPEVLENLEVK AEILLSNHYTSSEIRVFGAPEVLENLEVKS RVFGAPEVLENLEVKSGSPAVLAFAKEKSF R V F V K S 1 0 1 0 0 0 3 1 0 0 2 1 0 1 1 0 0 0 0 3 0 0 14 0 1542.8294 Q8TEM1 Q8TEM1 1711 1724 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.0010578 122.34 By MS/MS 1.5 0.5 1 1 2 123830 123830 0 14484 2001 15315 36947;36948 29578;29579 29578 2 38039 0 VFHSYSPYDHK VPAQVKKQRTKDLSRVFHSYSPYDHKIGER DLSRVFHSYSPYDHKIGERQQVLVTEESFD R V F H K I 0 0 0 1 0 0 0 0 2 0 0 1 0 1 1 2 0 0 2 1 0 0 11 0 1378.6306 Q5VV42 Q5VV42 423 433 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 3 0.0073282 94.465 By MS/MS 5.5 0.5 1 1 2 1666100 1666100 0 14485 1652 15316 36949;36950 29580 29580 1 12274 0 VFIGNLNTLVVK SNVTNKTDPRSMNSRVFIGNLNTLVVKKSD NSRVFIGNLNTLVVKKSDVEAIFSKYGKIV R V F V K K 0 0 2 0 0 0 0 1 0 1 2 1 0 1 0 0 1 0 0 3 0 0 12 0 1315.7864 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 18 29 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 1.0249E-09 224.75 By MS/MS 7 0 1 1 2207700 2207700 0 14486 514 15317 36951 29581 29581 1 34657 0 VFLALAAK YSPKMQLVCCRAIVKVFLALAAKGPVLRNC CCRAIVKVFLALAAKGPVLRNCISTVVHQG K V F A K G 3 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 831.52182 P78527 P78527 464 471 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.012704 107.74 By MS/MS 3 1.41 1 1 1 1 1 5 2582000 2582000 0 14487 1225 15318 36952;36953;36954;36955;36956 29582;29583;29584;29585 29582 4 570980 0 VFLENVIR RISGLIYEETRGVLKVFLENVIRDAVTYTE ETRGVLKVFLENVIRDAVTYTEHAKRKTVT K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 0.0056429 107.9 By MS/MS 10 0 1 1 329640 329640 0 14488 1170 15319 36957 29586 29586 1 17767 0 VFLLGEEVAQYDGAYK AINQGMDEELERDEKVFLLGEEVAQYDGAY FLLGEEVAQYDGAYKVSRGLWKKYGDKRII K V F Y K V 2 0 0 1 0 1 2 2 0 0 2 1 0 1 0 0 0 0 2 2 0 0 16 0 1800.8934 P11177 P11177 53 68 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 4.4926E-07 234.87 By MS/MS 7.33 0.471 2 1 3 649670 649670 0 14489 575 15320 36958;36959;36960 29587;29588;29589;29590 29588 4 9674.7 0 VFNDTCR SVRRTGRIPKKLLQKVFNDTCRSGGLGGSH IPKKLLQKVFNDTCRSGGLGGSHALLLLRS K V F C R S 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 7 0 910.3967 P42704 P42704 108 114 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.010698 133.6 By MS/MS 4 0.816 1 1 1 3 20666000 20666000 0 14490 886 15321 36961;36962;36963 29591;29592 29591 2 495840 0 VFNETPINPR PFQHLEKSAVLQEARVFNETPINPRKCAHI LQEARVFNETPINPRKCAHILTKILYLINQ R V F P R K 0 1 2 0 0 0 1 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 10 0 1185.6142 Q9Y678 Q9Y678 33 42 COPG1 Coatomer subunit gamma-1 yes yes 2 0.00058636 131.62 By MS/MS 4.5 0.5 1 1 2 6859400 6859400 0 14491 2933 15322 36964;36965 29593;29594 29593 2 645520 0 VFNLYPR DENQFVAVTSTNAAKVFNLYPRKGRIAVGS VTSTNAAKVFNLYPRKGRIAVGSDADLVIW K V F P R K 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 7 0 907.49159 Q16555 Q16555 391 397 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 2 0.01823 114.02 By MS/MS 5 0 1 1 602570 602570 0 14492 1552 15323 36966 29595 29595 1 6043.5 0 VFNYNTLER RKNWVVTGADDMQIRVFNYNTLERVHMFEA DDMQIRVFNYNTLERVHMFEAHSDYIRCIA R V F E R V 0 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 9 0 1154.572 P35606 P35606 83 91 COPB2 Coatomer subunit beta yes yes 2 3.7162E-05 174.02 By MS/MS 2.5 1.12 1 1 1 1 4 6522800 6522800 0 14493 826 15324 36967;36968;36969;36970 29596;29597;29598;29599 29597 4 1305000 0 VFPGSTTEDYNLIVIER LDLDLTADSQPPVFKVFPGSTTEDYNLIVI PGSTTEDYNLIVIERGAAAAATGQPGTAPA K V F E R G 0 1 1 1 0 0 2 1 0 2 1 0 0 1 1 1 2 0 1 2 0 0 17 0 1951.9891 Q13263 Q13263 508 524 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.00014496 182.02 By MS/MS 5 0.816 1 1 1 3 1554500 1554500 0 14494 1367 15325 36971;36972;36973 29600;29601 29601 2 104490 0 VFPMRLMLR LCGILIQKLEIPWAKVFPMRLMLRLGAEYK EIPWAKVFPMRLMLRLGAEYKAYPAPLTSI K V F L R L 0 2 0 0 0 0 0 0 0 0 2 0 2 1 1 0 0 0 0 1 0 0 9 1 1161.6515 Q7Z3T8 Q7Z3T8 1188 1196 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 3 0.049859 51.854 By MS/MS 1 0 1 1 205680 205680 0 14495 1786 15326 36974 29602 29602 937;938 1 49562 0 VFQASPEDHEK DWIRHKFTRSRIPEKVFQASPEDHEKYGGD IPEKVFQASPEDHEKYGGDPQNPHKLHIVT K V F E K Y 1 0 0 1 0 1 2 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 11 0 1285.5939 Q8TCC3 Q8TCC3 45 55 MRPL30 39S ribosomal protein L30, mitochondrial yes yes 2 4.5049E-09 206.73 By MS/MS 10 0 1 1 1415400 1415400 0 14496 1989 15327 36975 29603 29603 1 76283 0 VFQEAVVDER PAVKVSMDWLRLRPRVFQEAVVDERQYIWP RLRPRVFQEAVVDERQYIWPWLISLLNSFH R V F E R Q 1 1 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 3 0 0 10 0 1190.5932 Q92540 Q92540 377 386 SMG7 Protein SMG7 yes yes 2 0.00077259 128.01 By MS/MS 3 0 1 1 697270 697270 0 14497 2051 15328 36976 29604 29604 1 12758 0 VFQETQK RAHRRFVTKKALCIRVFQETQKLKKRRRAL TKKALCIRVFQETQKLKKRRRALKAAAAAQ R V F Q K L 0 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 7 0 878.44978 P82914 P82914 213 219 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.0043136 158.36 By MS/MS 8.5 0.5 1 1 2 5012100 5012100 0 14498 1235 15329 36977;36978 29605 29605 1 73590 0 VFQFLNAK IYPGHGRRYARTDGKVFQFLNAKCESAFLS YARTDGKVFQFLNAKCESAFLSKRNPRQIN K V F A K C 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 965.53345 P83731 P83731 28 35 RPL24 60S ribosomal protein L24 yes yes 2 0.00036581 152.63 By MS/MS 8.5 0.5 1 1 2 5352600 5352600 0 14499 1241 15330 36979;36980 29606 29606 1 104570 0 VFQSSTSQEQVYNDCAK EDTVVIASKPYAFDRVFQSSTSQEQVYNDC QSSTSQEQVYNDCAKKIVKDVLEGYNGTIF R V F A K K 1 0 1 1 1 3 1 0 0 0 0 1 0 1 0 3 1 0 1 2 0 0 17 0 1989.8738 P33176 P33176 51 67 KIF5B Kinesin-1 heavy chain yes yes 2 1.4626E-11 244.71 By MS/MS 4 0 1 1 2942700 2942700 0 14500 800 15331 36981 29607 29607 1 276930 0 VFSATLGLVDIVK SGLEHSAHVLEKGGKVFSATLGLVDIVKGT GKVFSATLGLVDIVKGTNSYYKLQLLEDDK K V F V K G 1 0 0 1 0 0 0 1 0 1 2 1 0 1 0 1 1 0 0 3 0 0 13 0 1360.7966 P09874 P09874 552 564 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00019055 163.84 By MS/MS 4 0 1 1 136100 136100 0 14501 543 15332 36982 29608 29608 1 12808 0 VFSDEVQQQAQLSTIR VHPNYHKEPFLQQLKVFSDEVQQQAQLSTI FSDEVQQQAQLSTIRSFLKLYTTMPVAKLA K V F I R S 1 1 0 1 0 4 1 0 0 1 1 0 0 1 0 2 1 0 0 2 0 0 16 0 1847.9377 Q9Y262 Q9Y262 446 461 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 1.514E-57 360.11 By MS/MS By MS/MS 5.73 2.24 1 1 5 4 1 1 1 1 13 2 138450000 138220000 226100 14502 2814 15333 36983;36984;36985;36986;36987;36988;36989;36990;36991;36992;36993;36994;36995;36996;36997 29609;29610;29611;29612;29613;29614;29615;29616;29617;29618;29619;29620;29621 29615 13 1778500 202910 VFSGLVSTGLK MVPTSDKGRFYAFGRVFSGLVSTGLKVRIM AFGRVFSGLVSTGLKVRIMGPNYTPGKKED R V F L K V 0 0 0 0 0 0 0 2 0 0 2 1 0 1 0 2 1 0 0 2 0 0 11 0 1106.6336 P13639 P13639 416 426 EEF2 Elongation factor 2 yes yes 2 8.2167E-06 174.86 By MS/MS By MS/MS 4.38 1.49 1 1 3 1 1 1 7 1 61653000 61602000 51750 14503 602 15334 36998;36999;37000;37001;37002;37003;37004;37005 29622;29623;29624;29625;29626;29627 29625 6 4664600 110260 VFSIGPVFR PQLYKQMCICADFEKVFSIGPVFRAEDSNT CADFEKVFSIGPVFRAEDSNTHRHLTEFVG K V F F R A 0 1 0 0 0 0 0 1 0 1 0 0 0 2 1 1 0 0 0 2 0 0 9 0 1020.5757 P14868 P14868 265 273 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.046912 77.282 By MS/MS 7.5 1.12 1 1 1 1 4 3488500 3488500 0 14504 620 15335 37006;37007;37008;37009 29628 29628 1 28029 0 VFSLSSEFK NQLLKPTLSEIELFRVFSLSSEFKNITVRE EIELFRVFSLSSEFKNITVREEEKLELQKL R V F F K N 0 0 0 0 0 0 1 0 0 0 1 1 0 2 0 3 0 0 0 1 0 0 9 0 1042.5335 O75643 O75643 1017 1025 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0060994 107.29 By MS/MS 1.5 0.5 1 1 2 1011600 1011600 0 14505 340 15336 37010;37011 29629;29630;29631 29630 2 317740 0 VFTEANLVSVGSK SAANKTIIYLDREKRVFTEANLVSVGSKKL KRVFTEANLVSVGSKKLRESVLRMSFEFHQ R V F S K K 1 0 1 0 0 0 1 1 0 0 1 1 0 1 0 2 1 0 0 3 0 0 13 0 1349.7191 Q9NU22 Q9NU22 2644 2656 MDN1 Midasin yes yes 2 3.5723E-06 200.93 By MS/MS 1.5 0.5 1 1 2 1080000 1080000 0 14506 2580 15337 37012;37013 29632;29633;29634 29632 3 290620 0 VFTTVGSAEK VGQAAIAIALSLGCRVFTTVGSAEKRAYLQ SLGCRVFTTVGSAEKRAYLQARFPQLDSTS R V F E K R 1 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 2 0 0 2 0 0 10 0 1037.5393 P49327 P49327 1695 1704 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00019902 147.2 By MS/MS 3 1.41 1 1 1 1 1 5 16894000 16894000 0 14507 946 15338 37014;37015;37016;37017;37018 29635;29636;29637;29638 29637 4 3388600 0 VFTTVGSAEKR VGQAAIAIALSLGCRVFTTVGSAEKRAYLQ LGCRVFTTVGSAEKRAYLQARFPQLDSTSF R V F K R A 1 1 0 0 0 0 1 1 0 0 0 1 0 1 0 1 2 0 0 2 0 0 11 1 1193.6404 P49327 P49327 1695 1705 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00038411 150.81 By MS/MS 3.25 1.16 1 2 4 3 2 12 16490000 16490000 0 14508 946 15339 37019;37020;37021;37022;37023;37024;37025;37026;37027;37028;37029;37030 29639;29640;29641;29642;29643;29644 29642 6 2396200 0 VFVESVLR FSEAFIAWIHVKALRVFVESVLRYGLPVNF IHVKALRVFVESVLRYGLPVNFQAMLLQPN R V F L R Y 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 3 0 0 8 0 947.54402 P21283;Q8NEY4 P21283 302 309 ATP6V1C1;ATP6V1C2 V-type proton ATPase subunit C 1;V-type proton ATPase subunit C 2 yes no 2 0.031438 89.55 By MS/MS 7 0 1 1 716900 716900 0 14509 676 15340 37031 29645 29645 1 11254 0 VFVEYIQPK LDILLYFTRQKDMAKVFVEYIQPKDPTNGQ QKDMAKVFVEYIQPKDPTNGQMYQKTLLGV K V F P K D 0 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 0 1 2 0 0 9 0 1121.6121 Q14139 Q14139 309 317 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.00070205 140.5 By MS/MS 3.5 0.5 1 1 2 2010300 2010300 0 14510 1421 15341 37032;37033 29646;29647 29646 2 119760 0 VFVGGLSPDTSEEQIK PKRAKALKGKEPPKKVFVGGLSPDTSEEQI FVGGLSPDTSEEQIKEYFGAFGEIENIELP K V F I K E 0 0 0 1 0 1 2 2 0 1 1 1 0 1 1 2 1 0 0 2 0 0 16 0 1704.857 O14979 O14979 235 250 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 0.00044992 148.13 By MS/MS 7 0 1 1 2505400 2505400 0 14511 152 15342 37034 29648 29648 1 39331 0 VFVNPSLR PRQRALRQMEPFPLRVFVNPSLRVLDSRLV MEPFPLRVFVNPSLRVLDSRLVTFPEGCES R V F L R V 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 8 0 930.5287 Q9HBH1 Q9HBH1 152 159 PDF Peptide deformylase, mitochondrial yes yes 2 0.030906 89.752 By MS/MS 9 0 1 1 1933500 1933500 0 14512 2504 15343 37035 29649 29649 1 38051 0 VFVSPLAK PSAPCPATPAGPKGRVFVSPLAKKLAVEKG PAGPKGRVFVSPLAKKLAVEKGIDLTQVKG R V F A K K 1 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 8 0 859.51674 P10515 P10515 355 362 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.017235 102.71 By MS/MS By matching 5 0 2 1 1 8201100 7736000 465040 14513 561 15344 37036;37037 29650 29650 1 77588 390540 VGAAEIISR NYRQLVDTTVELANKVGAAEIISRIVDDLK VELANKVGAAEIISRIVDDLKDEAEQYRKM K V G S R I 2 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 0 1 0 0 9 0 914.51853 O75533 O75533 844 852 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0013614 129.42 By MS/MS 3.5 0.5 1 1 2 3079500 3079500 0 14514 332 15345 37038;37039 29651 29651 1 125440 0 VGAAGPAPGTGSGPLR RVLLPVWEAEGLGLRVGAAGPAPGTGSGPL GAAGPAPGTGSGPLRAARDSIELRRGACVR R V G L R A 3 1 0 0 0 0 0 5 0 0 1 0 0 0 3 1 1 0 0 1 0 0 16 0 1363.7208 Q5T447 Q5T447 75 90 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 2 0.00048749 163.84 By MS/MS 4 0 1 1 1508400 1508400 0 14515 1631 15346 37040 29652 29652 1 141950 0 VGAEDADGIDMAYR EAIQKGTGARPYTGKVGAEDADGIDMAYRV KVGAEDADGIDMAYRVLADHARTITVALAD K V G Y R V 3 1 0 3 0 0 1 2 0 1 0 0 1 0 0 0 0 0 1 1 0 0 14 0 1481.6457 P49588 P49588 283 296 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0004845 156.01 By MS/MS 4.5 0.5 1 1 2 1601100 1601100 0 14516 951 15347 37041;37042 29653 29653 1 100430 0 VGAPLVCCEIK GAGTISEVWDYNTGRVGAPLVCCEIKLKNW NTGRVGAPLVCCEIKLKNWEEGGYFNTDKP R V G I K L 1 0 0 0 2 0 1 1 0 1 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1244.6257 O95573 O95573 497 507 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 0.011377 90.15 By MS/MS 3.5 1.12 1 1 1 1 4 8904300 8904300 0 14517 417 15348 37043;37044;37045;37046 29654 29654 1 227760 0 VGCGSPR GTTVLNCSHDFLSGKVGCGSPRIHFGGLIE SHDFLSGKVGCGSPRIHFGGLIEEDDVILL K V G P R I 0 1 0 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 0 1 0 0 7 0 731.33846 Q6UB35 Q6UB35 300 306 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.044235 94.006 By MS/MS 4 0 1 1 1308100 1308100 0 14518 1728 15349 37047 29655 29655 1 123100 0 VGCVWQTVR CLEMLLRIVLENRDRVGCVWQTVRDHLYHL LENRDRVGCVWQTVRDHLYHLCVQAQDFCF R V G V R D 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 3 0 0 9 0 1103.5546 Q92538 Q92538 1171 1179 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0078616 104.2 By MS/MS 2 0 1 1 186290 186290 0 14519 2050 15350 37048 29656 29656 1 63010 0 VGDAIPAVEVFEGEPGNK VRSFSRAAAAMAPIKVGDAIPAVEVFEGEP AIPAVEVFEGEPGNKVNLAELFKGKKGVLF K V G N K V 2 0 1 1 0 0 3 3 0 1 0 1 0 1 2 0 0 0 0 3 0 0 18 0 1826.905 P30044 P30044 58 75 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.0038042 98.592 By MS/MS 10 0 1 1 68335 68335 0 14520 763 15351 37049 29657;29658 29658 2 3683 0 VGDDPAVWQLK ALGDLISATKAAAGKVGDDPAVWQLKNSAK AAGKVGDDPAVWQLKNSAKVMVTNVTSLLK K V G L K N 1 0 0 2 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 11 0 1226.6295 Q9Y490 Q9Y490 2105 2115 TLN1 Talin-1 yes yes 2 7.5725E-05 154.01 By MS/MS 3 0.816 1 1 1 3 1564400 1564400 0 14521 2888 15352 37050;37051;37052 29659;29660 29659 2 378800 0 VGDDVEFEVSSDR FFHCSQYNGNLQDLKVGDDVEFEVSSDRRT LKVGDDVEFEVSSDRRTGKPIAVKLVKIKQ K V G D R R 0 1 0 3 0 0 2 1 0 0 0 0 0 1 0 2 0 0 0 3 0 0 13 0 1452.6369 O75534 O75534 65 77 CSDE1 Cold shock domain-containing protein E1 yes yes 2 8.4687E-08 215.08 By MS/MS 4 0 1 1 1801000 1801000 0 14522 333 15353 37053 29661 29661 1 169480 0 VGDDVEFEVSSDRR FFHCSQYNGNLQDLKVGDDVEFEVSSDRRT KVGDDVEFEVSSDRRTGKPIAVKLVKIKQE K V G R R T 0 2 0 3 0 0 2 1 0 0 0 0 0 1 0 2 0 0 0 3 0 0 14 1 1608.738 O75534 O75534 65 78 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 0.00013811 145.99 By MS/MS 4.33 0.471 2 1 3 6165600 6165600 0 14523 333 15354 37054;37055;37056 29662;29663;29664 29663 3 580220 0 VGDFVATDLDTGRPSTTVR SKTYVVTGNMGSNDKVGDFVATDLDTGRPS VATDLDTGRPSTTVRYVMGNNPADLLAVDS K V G V R Y 1 2 0 3 0 0 0 2 0 0 1 0 0 1 1 1 4 0 0 3 0 0 19 1 2006.0069 Q02413 Q02413 404 422 DSG1 Desmoglein-1 yes yes 3 0.00021068 120.66 By matching By MS/MS 4 3.16 1 1 1 1 1 1 4 1786200 667770 1118400 14524 1277 15355 37057;37058;37059;37060;37061 29665;29666 29665 2 62841 411630 VGDNDFLEVR QEAGGRVRDYLVRKRVGDNDFLEVRVAVVG LVRKRVGDNDFLEVRVAVVGNVDAGKSTLL R V G V R V 0 1 1 2 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1162.5619 O00178 O00178 153 162 GTPBP1 GTP-binding protein 1 yes yes 2 0.0012214 119.34 By MS/MS 5 0 1 1 672380 672380 0 14525 88 15356 37062 29667 29667 1 6743.6 0 VGDPQELNGITR PESFEYIEAHGTGTKVGDPQELNGITRALC GTKVGDPQELNGITRALCATRQEPLLIGST K V G T R A 0 1 1 1 0 1 1 2 0 1 1 0 0 0 1 0 1 0 0 1 0 0 12 0 1297.6626 P49327 P49327 299 310 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.6539E-05 171.67 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 25460000 25460000 0 14526 946 15357 37063;37064;37065;37066;37067;37068 29668;29669;29670;29671;29672 29671 4 4744200 0 VGDQILLAIK APRCIHVYKKNGVGKVGDQILLAIKGQKKK NGVGKVGDQILLAIKGQKKKALIVGHCMPG K V G I K G 1 0 0 1 0 1 0 1 0 2 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1068.6543 Q6P1L8 Q6P1L8 69 78 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 1.7575E-10 209.21 By MS/MS 10 0 1 1 781960 781960 0 14527 1699 15358 37069 29673 29673 1 42145 0 VGDTVLGMATQCVQMKNVQR VILPGKTPVYAEVKRVGDTVLGMATQCVQM LGMATQCVQMKNVQRTTPQTLSNLCLKINV R V G Q R T 1 1 1 1 1 3 0 2 0 0 1 1 2 0 0 0 2 0 0 4 0 0 20 1 2234.097 Q9UKV8 Q9UKV8 535 554 AGO2 Protein argonaute-2 yes yes 3 0.049152 47.09 By MS/MS 8 0 1 1 149990 0 149990 14528 2766 15359 37070 29674 29674 1164;1165 1 0 202410 VGDVQGQESESQLPTK DDYTPVNIDGAHAQRVGDVQGQESESQLPT GDVQGQESESQLPTKIILTGQKTKTLHKEE R V G T K I 0 0 0 1 0 3 2 2 0 0 1 1 0 0 1 2 1 0 0 2 0 0 16 0 1700.8217 Q96JH7 Q96JH7 676 691 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 2.2147E-33 309.49 By MS/MS 4 0.816 1 1 1 3 825750 825750 0 14529 2179 15360 37071;37072;37073 29675;29676 29675 2 27952 0 VGEAIETTQR IKNRQKIQKLVLEGRVGEAIETTQRFYPGL VLEGRVGEAIETTQRFYPGLLEHNPNLLFM R V G Q R F 1 1 0 0 0 1 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 10 0 1102.5619 Q6VN20 Q6VN20 307 316 RANBP10 Ran-binding protein 10 yes yes 2 2.2818E-05 166.07 By MS/MS 5 0 1 1 1568400 1568400 0 14530 1734 15361 37074 29677 29677 1 15730 0 VGEAPGLQQPQPR ______________________________ GRVGEAPGLQQPQPRGIRGSSAARPSGRRR R V G P R G 1 1 0 0 0 3 1 2 0 0 1 0 0 0 3 0 0 0 0 1 0 0 13 0 1375.7208 P42684 P42684 8 20 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0018915 112.85 By MS/MS 3 0 1 1 280870 280870 0 14531 883 15362 37075 29678 29678 1 5139.2 0 VGEATETALTCLVEK DSALDYNEAKGVYEKVGEATETALTCLVEK VGEATETALTCLVEKMNVFDTELKGLSKIE K V G E K M 2 0 0 0 1 0 3 1 0 0 2 1 0 0 0 0 3 0 0 2 0 0 15 0 1619.8076 P16615;Q93084 P16615 437 451 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 1.6018E-43 322.77 By MS/MS 3.62 2.12 2 1 1 1 1 1 1 8 29137000 29137000 0 14532 635 15363 37076;37077;37078;37079;37080;37081;37082;37083 29679;29680;29681;29682;29683;29684;29685;29686;29687 29683 9 3480500 0 VGEFSGANK VKCMPTFQFFKKGQKVGEFSGANKEKLEAT FKKGQKVGEFSGANKEKLEATINELV____ K V G N K E 1 0 1 0 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 907.43995 P10599 P10599 86 94 TXN Thioredoxin yes yes 2 0.0005505 145.16 By MS/MS By MS/MS 7.29 2.91 1 1 1 1 1 2 1 6 3974600 3394300 580280 14533 563 15364 37084;37085;37086;37087;37088;37089;37090 29688;29689;29690 29690 3 182940 736860 VGEFSGANKEK VKCMPTFQFFKKGQKVGEFSGANKEKLEAT KGQKVGEFSGANKEKLEATINELV______ K V G E K L 1 0 1 0 0 0 2 2 0 0 0 2 0 1 0 1 0 0 0 1 0 0 11 1 1164.5775 P10599 P10599 86 96 TXN Thioredoxin yes yes 2;3 0.00029954 133.23 By MS/MS By matching 10 0 3 2 1 2258100 2189000 69112 14534 563 15365 37091;37092;37093 29691;29692 29691 2 117980 88483 VGEIVVFR GDLLFLTNRVEDPIRVGEIVVFRIEGREIP RVEDPIRVGEIVVFRIEGREIPIVHRVLKI R V G F R I 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 3 0 0 8 0 917.53345 P67812 P67812 79 86 SEC11A Signal peptidase complex catalytic subunit SEC11A yes yes 2 0.0053896 123.69 By MS/MS 9.5 0.5 1 1 2 1988800 1988800 0 14535 1207 15366 37094;37095 29693;29694 29693 2 44464 0 VGENVSDVAPIR PRWNTHGHVSDTSIRVGENVSDVAPIRSRC SIRVGENVSDVAPIRSRCNTHGHVSDASIS R V G I R S 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 0 0 0 3 0 0 12 0 1254.6568 Q96RT7 Q96RT7 1225 1236 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 5.3696E-05 166.29 By MS/MS 2.5 0.5 1 1 2 1451700 1451700 0 14536 2226 15367 37096;37097 29695 29695 1 348590 0 VGENVSDVAPTQPR PRWNTHGHVSDASIRVGENVSDVAPTQPRW RVGENVSDVAPTQPRWNTHGHVSNASISLG R V G P R W 1 1 1 1 0 1 1 1 0 0 0 0 0 0 2 1 1 0 0 3 0 0 14 0 1467.7318 Q96RT7 Q96RT7 1063 1076 TUBGCP6 Gamma-tubulin complex component 6 yes yes 2 0.00014135 177.16 By MS/MS 2.5 0.5 1 1 2 1270800 1270800 0 14537 2226 15368 37098;37099 29696;29697 29696 2 328210 0 VGENVSDVAPTRPR PRWNIHGHVSNASIRVGENVSDVAPTRPRW RVGENVSDVAPTRPRWNTHGHVSNASIRVG R V G P R W 1 2 1 1 0 0 1 1 0 0 0 0 0 0 2 1 1 0 0 3 0 0 14 1 1495.7743 Q96RT7 Q96RT7 1117 1130 TUBGCP6 Gamma-tubulin complex component 6 yes no 3 0.017393 79.886 By MS/MS 2.5 0.5 1 1 2 1773700 1773700 0 14538 2226 15369 37100;37101 29698 29698 1 480660 0 VGEPKDVIR TENEASSFIPYLVVKVGEPKDVIRKDVRAI PYLVVKVGEPKDVIRKDVRAILNRMCLVYP K V G I R K 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1011.5713 Q14008 Q14008 1298 1306 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.05479 92.051 By MS/MS 2 0 1 1 311100 311100 0 14539 1417 15370 37102 29699 29699 1 105230 0 VGEPVALSEEER PMAHPPNLGPPPPLRVGEPVALSEEERLKL PLRVGEPVALSEEERLKLAQQQAALLMQQE R V G E R L 1 1 0 0 0 0 4 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1313.6463 Q13435 Q13435 135 146 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.00016696 152.64 By MS/MS 3.5 0.5 1 1 2 3048100 3048100 0 14540 1384 15371 37103;37104 29700 29700 1 83519 0 VGERQPLLGPPESMR ARRRMISKQFHHQLRVGERQPLLGPPESMR VGERQPLLGPPESMREHVVAASKAMKMGDW R V G M R E 0 2 0 0 0 1 2 2 0 0 2 0 1 0 3 1 0 0 0 1 0 0 15 1 1664.8668 Q99613;B5ME19 Q99613 720 734 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.048464 58.831 By MS/MS 4 0 1 1 667730 667730 0 14541 2252 15372 37105 29701 29701 1046 0 62838 0 VGESVFHTTR LEEEAIIMKDVPDWKVGESVFHTTRWVPPL VPDWKVGESVFHTTRWVPPLIGELYGLRTT K V G T R W 0 1 0 0 0 0 1 1 1 0 0 0 0 1 0 1 2 0 0 2 0 0 10 0 1131.5673 Q9P0J0 Q9P0J0 106 115 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2;3 1.8254E-06 179.81 By MS/MS By matching 10 0 3 2 1 13789000 13774000 14934 14542 2664 15373 37106;37107;37108 29702;29703 29702 2 742360 19119 VGEVIVTK LTLNLEDVQPHDLGKVGEVIVTKDDAMLLK QPHDLGKVGEVIVTKDDAMLLKGKGDKAQI K V G T K D 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 8 0 843.50657 P10809 P10809 345 352 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.016025 104.06 By MS/MS 5.5 0.5 1 1 2 8838800 8838800 0 14543 569 15374 37109;37110 29704 29704 1 62411 0 VGEVIVTKDDAMLLK LTLNLEDVQPHDLGKVGEVIVTKDDAMLLK VGEVIVTKDDAMLLKGKGDKAQIEKRIQEI K V G L K G 1 0 0 2 0 0 1 1 0 1 2 2 1 0 0 0 1 0 0 3 0 0 15 1 1629.9011 P10809 P10809 345 359 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 4.8499E-05 201.38 By MS/MS 6.2 0.98 3 3 3 1 10 96229000 96229000 0 14544 569 15375;15376 37111;37112;37113;37114;37115;37116;37117;37118;37119;37120 29705;29706;29707 29707 250 3 702690 0 VGGEFFFDPQPADASR WVHNTCTLDCEVAVRVGGEFFFDPQPADAS GGEFFFDPQPADASRNLVLIAGGVGINPLL R V G S R N 2 1 0 2 0 1 1 2 0 0 0 0 0 3 2 1 0 0 0 1 0 0 16 0 1738.7951 Q96HP4 Q96HP4 155 170 OXNAD1 Oxidoreductase NAD-binding domain-containing protein 1 yes yes 2 0.00042835 146.67 By MS/MS 8 0 1 1 291510 291510 0 14545 2167 15377 37121 29708 29708 1 3680.3 0 VGGGAGGAGGGPGGR V G G R 2 1 0 0 0 0 0 10 0 0 0 0 0 0 1 0 0 0 0 1 0 0 15 0 1082.5217 REV__Q14934 yes yes 2 0.0076018 96.034 By MS/MS 7 0 1 1 298080 298080 0 + 14546 2966 15378 37122 29709 29709 1 4679.2 0 VGGGGVGGGLLENANPLIYQR ______________________________ GGGLLENANPLIYQRSGERPVTAGEEDEQV M V G Q R S 1 1 2 0 0 1 1 7 0 1 3 0 0 0 1 0 0 0 1 2 0 0 21 0 2040.0752 Q9Y3D0 Q9Y3D0 2 22 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 2 1.3642E-26 285.38 By MS/MS 9.5 0.5 1 1 2 207280 207280 0 14547 2870 15379 37123;37124 29710 29710 1 10273 0 VGGHAAEYGAEALER LSAADKGNVKAAWGKVGGHAAEYGAEALER VGGHAAEYGAEALERMFLSFPTTKTYFPHF K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 2;3 0.00037627 168.98 By MS/MS 10 0 2 2 2006100 2006100 0 + 14548 38 15380 37125;37126 29711;29712 29711 2 108120 0 VGGLLAFAK LRGDHTRCKTVLTGKVGGLLAFAKRRNCCI TVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ K V G A K R 2 0 0 0 0 0 0 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 874.52764 P28340 P28340 999 1007 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.011924 97.068 By MS/MS 3 0 1 1 144650 144650 0 14549 754 15381 37127 29713 29713 1 2646.7 0 VGGNIEVLGFNAR LRNDKDKPLPPLLARVGGNIEVLGFNARQR ARVGGNIEVLGFNARQRKAFLNAIMRYGMP R V G A R Q 1 1 2 0 0 0 1 3 0 1 1 0 0 1 0 0 0 0 0 2 0 0 13 0 1344.715 Q14839;Q8TDI0 Q14839 1407 1419 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 2.6308E-11 225.93 By MS/MS 2.5 1.12 1 1 1 1 4 2620200 2620200 0 14550 1459 15382 37128;37129;37130;37131 29714;29715;29716 29714 3 668910 0 VGGRLEDTK ERRDVDFELIKVEGKVGGRLEDTKLIKGVI IKVEGKVGGRLEDTKLIKGVIVDKDFSHPQ K V G T K L 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 973.51926 P48643 P48643 215 223 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.042106 95.815 By MS/MS 6.5 0.5 1 1 2 21297000 21297000 0 14551 940 15383 37132;37133 29717 29717 1 153020 0 VGGTSDVEVNEK NERLAKLSDGVAVLKVGGTSDVEVNEKKDR VLKVGGTSDVEVNEKKDRVTDALNATRAAV K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 6.8545E-06 181.87 By MS/MS By MS/MS 6.57 1.4 2 2 1 1 1 5 2 33004000 32569000 434850 14552 569 15384 37134;37135;37136;37137;37138;37139;37140 29718;29719;29720;29721;29722;29723 29720 6 245880 436320 VGGTSDVEVNEKK NERLAKLSDGVAVLKVGGTSDVEVNEKKDR LKVGGTSDVEVNEKKDRVTDALNATRAAVE K V G K K D 0 0 1 1 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 3 0 0 13 1 1360.6834 P10809 P10809 406 418 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 4.3609E-17 257.09 By MS/MS By matching 5.67 0.471 1 2 2 1 5485900 5434300 51587 14553 569 15385 37141;37142;37143 29724;29725 29725 2 39691 52862 VGGTSDVEVNEKKDR NERLAKLSDGVAVLKVGGTSDVEVNEKKDR VGGTSDVEVNEKKDRVTDALNATRAAVEEG K V G D R V 0 1 1 2 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 3 0 0 15 2 1631.8115 P10809 P10809 406 420 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3;4 4.9819E-32 295.26 By MS/MS By MS/MS 6.53 1.26 4 4 3 3 1 13 2 199930000 199840000 94167 14554 569 15386 37144;37145;37146;37147;37148;37149;37150;37151;37152;37153;37154;37155;37156;37157;37158 29726;29727;29728;29729;29730 29729 5 1473800 85968 VGGVDPK LTYQAERMPEQIRLKVGGVDPKQLAVYEEF MPEQIRLKVGGVDPKQLAVYEEFARNVPGF K V G P K Q 0 0 0 1 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 2 0 0 7 0 670.36499 A5YKK6 A5YKK6 1561 1567 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.046647 92.191 By MS/MS 2 0 1 1 208310 208310 0 14555 19 15387 37159 29731 29731 1 70459 0 VGHSELVGEIIR TACDMAGAAMYELVRVGHSELVGEIIRLEG LVRVGHSELVGEIIRLEGDMATIQVYEETS R V G I R L 0 1 0 0 0 0 2 2 1 2 1 0 0 0 0 1 0 0 0 2 0 0 12 0 1307.7197 P38606 P38606 45 56 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2;3 0.0012628 120.27 By MS/MS 5.5 0.5 2 2 4 10438000 10438000 0 14556 849 15388 37160;37161;37162;37163 29732;29733 29732 2 87003 0 VGHVTER LEQLNGFELAGRPMKVGHVTERTDASSASS ELAGRPMKVGHVTERTDASSASSFLDSDEL K V G E R T 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 2 0 0 7 0 796.41915 Q14498;Q86U06 Q14498 323 329 RBM39;RBM23 RNA-binding protein 39;Probable RNA-binding protein 23 yes no 2 0.046281 92.467 By MS/MS 5.5 0.5 1 1 2 444080 444080 0 14557 1441 15389 37164;37165 29734 29734 1 3725.8 0 VGIFQSFQK IQHLRLQGQMPALMRVGIFQSFQKSSRDIL MPALMRVGIFQSFQKSSRDILLCTDIASRG R V G Q K S 0 0 0 0 0 2 0 1 0 1 0 1 0 2 0 1 0 0 0 1 0 0 9 0 1052.5655 Q9NUL7 Q9NUL7 437 445 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.00025866 154.12 By MS/MS 6 0 1 1 3714000 3714000 0 14558 2582 15390 37166 29735 29735 1 25531 0 VGILLDEASGVNK KFDLLVDANDVILERVGILLDEASGVNKNQ ERVGILLDEASGVNKNQQPVLPAGLQVPKT R V G N K N 1 0 1 1 0 0 1 2 0 1 2 1 0 0 0 1 0 0 0 2 0 0 13 0 1313.7191 Q01780 Q01780 124 136 EXOSC10 Exosome component 10 yes yes 2 0.00018296 164.65 By MS/MS 4 0 1 1 1656100 1656100 0 14559 1269 15391 37167 29736 29736 1 155850 0 VGINYQPPTVVPGGDLAK KRTIQFVDWCPTGFKVGINYQPPTVVPGGD NYQPPTVVPGGDLAKVQRAVCMLSNTTAVA K V G A K V 1 0 1 1 0 1 0 3 0 1 1 1 0 0 3 0 1 0 1 3 0 0 18 0 1823.9781 P68363;P68366;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 Q9BQE3 353 370 TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 2 5.4172E-11 206.45 By MS/MS By MS/MS 5.33 2.62 2 1 1 1 1 5 1 1 1 1 13 2 1167000000 1167000000 80993 14560 1210;1751;2290;1211 15392 37168;37169;37170;37171;37172;37173;37174;37175;37176;37177;37178;37179;37180;37181;37182 29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747;29748;29749;29750;29751;29752;29753;29754;29755;29756 29738 19 9679400 80993 VGLAALIIQDFK KTTKELKNPQETAERVGLAALIIQDFKGLL AERVGLAALIIQDFKGLLLSDYKFSWDRVF R V G F K G 2 0 0 1 0 1 0 1 0 2 2 1 0 1 0 0 0 0 0 1 0 0 12 0 1286.7598 Q5T160 Q5T160 427 438 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.00038811 138.22 By MS/MS 6 0 1 1 157980 157980 0 14561 1627 15393 37183 29757;29758 29757 2 1086 0 VGLADLHPDVFATAPR VQAWVESLRGFEQERVGLADLHPDVFATAP GLADLHPDVFATAPRLDILHQVAMWQKNFK R V G P R L 3 1 0 2 0 0 0 1 1 0 2 0 0 1 2 0 1 0 0 2 0 0 16 0 1677.8839 Q9BYD3 Q9BYD3 77 92 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.00041555 145.81 By MS/MS 7 0 1 1 1360000 1360000 0 14562 2370 15394 37184 29759 29759 1 21350 0 VGLDATNCLR PMLSPFISSVVRNGKVGLDATNCLRITDLK VRNGKVGLDATNCLRITDLKSGCTSLTPGP K V G L R I 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1117.555 Q9NXR7 Q9NXR7 27 36 BRE BRCA1-A complex subunit BRE yes yes 2 0.0068331 101.46 By MS/MS 7 0 1 1 763510 763510 0 14563 2627 15395 37185 29760 29760 1 11986 0 VGLDDLPLTAVPPYR YVEGDYKEALNIYARVGLDDLPLTAVPPYR VGLDDLPLTAVPPYRLRVIAEAYATKGLCL R V G Y R L 1 1 0 2 0 0 0 1 0 0 3 0 0 0 3 0 1 0 1 2 0 0 15 0 1624.8825 Q86TV6 Q86TV6 123 137 TTC7B Tetratricopeptide repeat protein 7B yes yes 2 0.0010307 159.09 By MS/MS 4 0 1 1 122600 122600 0 14564 1814 15396 37186 29761;29762 29762 2 11538 0 VGLEPPPGKR FDVVTLSGTRGPLSRVGLEPPPGKRECRVG GPLSRVGLEPPPGKRECRVGQYVVDLTSFE R V G K R E 0 1 0 0 0 0 1 2 0 0 1 1 0 0 3 0 0 0 0 1 0 0 10 1 1048.6029 Q9BSD7 Q9BSD7 65 74 NTPCR Cancer-related nucleoside-triphosphatase yes yes 3 0.015302 85.676 By MS/MS 9 0 1 1 219270 219270 0 14565 2304 15397 37187 29763 29763 1 4315.2 0 VGLIAAR GKPSTIRRDAPAGRKVGLIAARRTGRLRGT RDAPAGRKVGLIAARRTGRLRGTKTVQEKE K V G A R R 2 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 698.44391 P62917 P62917 235 241 RPL8 60S ribosomal protein L8 yes yes 2 0.017982 114.67 By MS/MS By matching 8.33 0.471 2 1 2 1 1750100 1699400 50713 14566 1187 15398 37188;37189;37190 29764 29764 1 22055 68434 VGLIALK DEPWPIHPWEPGSFRVGLIALKLGMMPLWT PWEPGSFRVGLIALKLGMMPLWTKDGQKHV R V G L K L 1 0 0 0 0 0 0 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 7 0 712.48471 P09001 P09001 97 103 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.011761 130.84 By MS/MS 7.5 0.5 1 1 2 2951700 2951700 0 14567 531 15399 37191;37192 29765;29766 29766 2 39616 0 VGLKAPGIIPR AIDGKGPIGSKTRRRVGLKAPGIIPRISVR TRRRVGLKAPGIIPRISVREPMQTGIKAVD R V G P R I 1 1 0 0 0 0 0 2 0 2 1 1 0 0 2 0 0 0 0 1 0 0 11 1 1119.7128 P25705 P25705 172 182 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 1.2648E-05 163.88 By MS/MS By MS/MS 6.86 1.12 4 1 1 1 5 2 32315000 32200000 115020 14568 723 15400 37193;37194;37195;37196;37197;37198;37199 29767;29768;29769;29770;29771 29769 5 236250 117860 VGLLAGQPAVTVR TCQDWLTRIRLSIMRVGLLAGQPAVTVRHG MRVGLLAGQPAVTVRHGFDLLTEMKTTSLS R V G V R H 2 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 1 0 0 3 0 0 13 0 1279.7612 Q96Q15 Q96Q15 1037 1049 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.014352 88.056 By MS/MS 1.5 0.5 1 1 2 198820 198820 0 14569 2213 15401 37200;37201 29772 29772 1 56546 0 VGLQVVAVK VDGEALSTLVLNRLKVGLQVVAVKAPGFGD VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.00086185 135.77 By MS/MS By MS/MS 5.71 1.48 1 2 2 1 1 5 2 52142000 51820000 321660 14570 569 15402 37202;37203;37204;37205;37206;37207;37208 29773;29774;29775;29776;29777;29778 29776 6 404480 320260 VGMVETNSQDRPVDDVK TIFGRVCQGIGMVNRVGMVETNSQDRPVDD MVETNSQDRPVDDVKIIKAYPSG_______ R V G V K I 0 1 1 3 0 1 1 1 0 0 0 1 1 0 1 1 1 0 0 4 0 0 17 1 1887.8996 Q9Y3C6 Q9Y3C6 142 158 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 3 0.053048 58.885 By MS/MS 10 0 1 1 344500 344500 0 14571 2868 15403 37209 29779 29779 1 18567 0 VGNHTAEGTGTNKK ERGLPRRREFVMQVKVGNHTAEGTGTNKKV KVGNHTAEGTGTNKKVAKRNAAENMLEILG K V G K K V 1 0 2 0 0 0 1 3 1 0 0 2 0 0 0 0 3 0 0 1 0 0 14 1 1412.7008 O95793 O95793 325 338 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2;3 0.0042639 120.77 By MS/MS 5.67 0.471 1 2 3 170180 170180 0 14572 426 15404 37210;37211;37212 29780;29781 29781 2 1274.2 0 VGNLGLATSFFNER SDIEEYVHRIGRTGRVGNLGLATSFFNERN RVGNLGLATSFFNERNINITKDLLDLLVEA R V G E R N 1 1 2 0 0 0 1 2 0 0 2 0 0 2 0 1 1 0 0 1 0 0 14 0 1523.7732 O00571 O00571 535 548 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 8.9052E-17 261.22 By MS/MS 6.44 2.06 2 2 1 1 1 1 1 9 15729000 15729000 0 14573 116 15405 37213;37214;37215;37216;37217;37218;37219;37220;37221 29782;29783;29784;29785;29786;29787;29788;29789 29788 8 161710 0 VGNNFHNLQEIR YKSDESYTPSKISVRVGNNFHNLQEIRQLE SVRVGNNFHNLQEIRQLELVEPSGWIHVPL R V G I R Q 0 1 3 0 0 1 1 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 12 0 1439.727 Q9UM13 Q9UM13 98 109 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 2;3 0.00023612 136.49 By MS/MS 9 0 2 2 2703300 2703300 0 14574 2780 15406 37222;37223 29790;29791 29791 2 53202 0 VGNQIFQSR KGLVKGKSDPYGIIRVGNQIFQSRVIKENL PYGIIRVGNQIFQSRVIKENLSPKWNEVYE R V G S R V 0 1 1 0 0 2 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1047.5461 A0FGR8 A0FGR8 420 428 ESYT2 Extended synaptotagmin-2 yes yes 2 0.0010691 133.13 By MS/MS 4.5 0.5 1 1 2 4503700 4503700 0 14575 6 15407 37224;37225 29792 29792 1 371690 0 VGNTPETR MYDIFGKYGPIRQIRVGNTPETRGTAYVVY GPIRQIRVGNTPETRGTAYVVYEDIFDAKN R V G T R G 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 2 0 0 1 0 0 8 0 872.43519 Q9Y3B4 Q9Y3B4 50 57 SF3B6 Splicing factor 3B subunit 6 yes yes 2 0.025855 93.143 By MS/MS 10 0 1 1 1513200 1513200 0 14576 2864 15408 37226 29793 29793 1 81555 0 VGPDVVTDPAFLVTR HLQAAVAFVEQGHVRVGPDVVTDPAFLVTR VGPDVVTDPAFLVTRSMEDFVTWVDSSKIK R V G T R S 1 1 0 2 0 0 0 1 0 0 1 0 0 1 2 0 2 0 0 4 0 0 15 0 1584.8512 Q9NV31 Q9NV31 138 152 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 2 0.0010477 122.46 By MS/MS 9 0 1 1 122440 122440 0 14577 2588 15409 37227 29794 29794 1 2409.7 0 VGPGAGESPGTPPFR GLFGFAARTSVFLVRVGPGAGESPGTPPFR VGPGAGESPGTPPFRVIGELVGHTERVSGF R V G F R V 1 1 0 0 0 0 1 4 0 0 0 0 0 1 4 1 1 0 0 1 0 0 15 0 1424.7048 Q8TEQ6 Q8TEQ6 41 55 GEMIN5 Gem-associated protein 5 yes yes 2 0.0015084 113.67 By MS/MS 3 0 1 1 1786100 1786100 0 14578 2002 15410 37228 29795;29796 29796 2 32681 0 VGPQYQAVVPDFDPAK SGSSSDEEHGGGGMRVGPQYQAVVPDFDPA GPQYQAVVPDFDPAKLARRSQERDNLGMLV R V G A K L 2 0 0 2 0 2 0 1 0 0 0 1 0 1 3 0 0 0 1 3 0 0 16 0 1729.8675 Q9UKL0 Q9UKL0 107 122 RCOR1 REST corepressor 1 yes yes 2 0.0027886 108.72 By MS/MS 5.5 0.5 1 1 2 1674300 1674300 0 14579 2760 15411 37229;37230 29797 29797 1 13736 0 VGPVSHHR VALSRWVFKEEGVLRVGPVSHHRVGETAPP KEEGVLRVGPVSHHRVGETAPPNAYTVTDL R V G H R V 0 1 0 0 0 0 0 1 2 0 0 0 0 0 1 1 0 0 0 2 0 0 8 0 887.47258 P39656 P39656 308 315 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.023865 101.64 By MS/MS By matching 6.33 0.471 2 1 2 1 11480000 11465000 15181 14580 855 15412 37231;37232;37233 29798;29799 29798 2 78811 15556 VGQALELPLR EPHSMEFAPCQVEARVGQALELPLRISGLM QVEARVGQALELPLRISGLMPGGASEVVTL R V G L R I 1 1 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1094.6448 Q8TEM1 Q8TEM1 549 558 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.033842 88.496 By MS/MS 2 0 1 1 442110 442110 0 14581 2001 15413 37234 29800 29800 0 149540 0 VGQAMASTEEK ILVDNNTWNNTHISRVGQAMASTEEKAYEI HISRVGQAMASTEEKAYEIMRELDVSYVLV R V G E K A 2 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 11 0 1149.5336 P46977 P46977 555 565 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00020723 141.91 By MS/MS 1.8 0.748 2 2 1 5 1212900 1212900 0 14582 923 15414;15415 37235;37236;37237;37238;37239 29801;29802;29803;29804 29803 487 4 314660 0 VGQASEIAR PAPQISDAELQEVVKVGQASEIARQTAEES LQEVVKVGQASEIARQTAEESGITNSASST K V G A R Q 2 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 9 0 929.49304 Q99459 Q99459 313 321 CDC5L Cell division cycle 5-like protein yes yes 2 0.035412 74.173 By MS/MS By matching 4.33 0.471 2 1 2 1 1922000 1895200 26803 14583 2245 15416 37240;37241;37242 29805 29805 1 143440 57109 VGQAVALR ARIRGETLGIIGLGRVGQAVALRAKAFGFN GIIGLGRVGQAVALRAKAFGFNVLFYDPYL R V G L R A 2 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 812.48684 Q13363 Q13363 185 192 CTBP1 C-terminal-binding protein 1 yes yes 2 0.026975 91.9 By MS/MS 7 0 1 1 631870 631870 0 14584 1374 15417 37243 29806 29806 1 9919.2 0 VGQAVDVVGQAGK VTFDEELRPLPVSVRVGQAVDVVGQAGKPK VRVGQAVDVVGQAGKPKTITGFQTHTTPVL R V G G K P 2 0 0 1 0 2 0 3 0 0 0 1 0 0 0 0 0 0 0 4 0 0 13 0 1226.6619 Q13200 Q13200 846 858 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0044734 105.17 By MS/MS 4 0 1 1 385200 385200 0 14585 1365 15418 37244 29807 29807 1 36250 0 VGQAVDVVGQAGKPK VTFDEELRPLPVSVRVGQAVDVVGQAGKPK VGQAVDVVGQAGKPKTITGFQTHTTPVLLA R V G P K T 2 0 0 1 0 2 0 3 0 0 0 2 0 0 1 0 0 0 0 4 0 0 15 1 1451.8096 Q13200 Q13200 846 860 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2;3 3.5425E-10 215.77 By MS/MS By matching 6.8 2.07 3 2 2 2 2 2 2 14 1 18181000 18159000 22237 14586 1365 15419 37245;37246;37247;37248;37249;37250;37251;37252;37253;37254;37255;37256;37257;37258;37259 29808;29809;29810;29811;29812;29813;29814;29815 29809 8 1363500 47380 VGQDPVLR LVLERSLNRVHLLGRVGQDPVLRQVEGKNP RVHLLGRVGQDPVLRQVEGKNPVTIFSLAT R V G L R Q 0 1 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 8 0 882.49232 Q04837 Q04837 39 46 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.00774 115.49 By MS/MS By MS/MS 10 0 2 1 1 12975000 12023000 951570 14587 1293 15420 37260;37261 29816;29817 29817 2 648020 1218300 VGQEIEVRPGIVSK KGGVAGGSILKGVLKVGQEIEVRPGIVSKD KVGQEIEVRPGIVSKDSEGKLMCKPIFSKI K V G S K D 0 1 0 0 0 1 2 2 0 2 0 1 0 0 1 1 0 0 0 3 0 0 14 1 1509.8515 P41091 P41091 290 303 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 2;3 1.1922E-10 217.22 By MS/MS By matching 6.27 2.49 1 1 3 2 2 2 10 1 79072000 78958000 113940 14588 866 15421 37262;37263;37264;37265;37266;37267;37268;37269;37270;37271;37272 29818;29819;29820;29821;29822;29823;29824 29820 7 830860 116760 VGQETFYDVYR FVLGGTMEWIMIKVRVGQETFYDVYRRKAS IKVRVGQETFYDVYRRKASERQYQRRLEDE R V G Y R R 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 0 1 0 2 2 0 0 11 0 1375.6408 Q8WVI0 Q8WVI0 45 55 SMIM4 Small integral membrane protein 4 yes yes 2 4.1704E-09 208.15 By MS/MS 10 0 1 1 6355200 6355200 0 14589 2025 15422 37273 29825 29825 1 342520 0 VGQETFYDVYRR FVLGGTMEWIMIKVRVGQETFYDVYRRKAS KVRVGQETFYDVYRRKASERQYQRRLEDE_ R V G R R K 0 2 0 1 0 1 1 1 0 0 0 0 0 1 0 0 1 0 2 2 0 0 12 1 1531.7419 Q8WVI0 Q8WVI0 45 56 SMIM4 Small integral membrane protein 4 yes yes 2;3 0.023666 106.16 By MS/MS 10 0 2 2 924030 924030 0 14590 2025 15423 37274;37275 29826;29827 29827 2 49802 0 VGQISFDLPR QSAYAQIVQFGMNEKVGQISFDLPRQGDMV GMNEKVGQISFDLPRQGDMVLEKPYSEATA K V G P R Q 0 1 0 1 0 1 0 1 0 1 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1130.6084 Q9Y4W6 Q9Y4W6 670 679 AFG3L2 AFG3-like protein 2 yes yes 2 0.00098246 123.96 By MS/MS 6 1.41 1 1 1 1 1 5 6643100 6643100 0 14591 2902 15424 37276;37277;37278;37279;37280 29828;29829 29828 2 103390 0 VGQLSEGAIAAIMQK ______________________________ VGQLSEGAIAAIMQKGDTNIKPILQVINIR M V G Q K G 3 0 0 0 0 2 1 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 15 0 1514.8127 P27694 P27694 2 16 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.0064801 112.02 By MS/MS 4.5 0.5 1 1 2 331430 331430 0 14592 744 15425 37281;37282 29830 29830 1 10501 0 VGQNLPR SDVLPVLSMKHTKDRVGQNLPRCGIECKSY SMKHTKDRVGQNLPRCGIECKSYQEGLARL R V G P R C 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 782.43989 Q9Y312 Q9Y312 174 180 AAR2 Protein AAR2 homolog yes yes 2 0.018031 114.54 By MS/MS 7 0 1 1 1953900 1953900 0 14593 2853 15426 37283 29831 29831 1 30673 0 VGQSEIR TAAHAYIMMFVHTCRVGQSEIRSISVNQWG MMFVHTCRVGQSEIRSISVNQWGSQLGLSV R V G I R S 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 787.41882 Q7Z6Z7 Q7Z6Z7 912 918 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.052962 89.296 By MS/MS 1.5 0.5 1 1 2 308060 308060 0 14594 1802 15427 37284;37285 29832 29832 1 90055 0 VGRDYVQK NVTDFTRGILTPRIKVGRDYVQKAQTKEQA ILTPRIKVGRDYVQKAQTKEQADFAIEALA K V G Q K A 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 8 1 963.51378 P35580;P35579;Q7Z406 P35579 396 403 MYH10;MYH9;MYH14 Myosin-10;Myosin-9;Myosin-14 no no 3 0.050209 82.241 By MS/MS 2 0 1 1 168150 168150 0 14595 824;825;1788 15428 37286 29833 29833 1 56875 0 VGRPIVEALR HPKALAELTKSDWERVGRPIVEALREISSA SDWERVGRPIVEALREISSAAAHSQPFAWK R V G L R E 1 2 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 10 1 1108.6717 P57678 P57678 42 51 GEMIN4 Gem-associated protein 4 yes yes 3 0.045988 60.167 By MS/MS 4 0 1 1 630790 630790 0 14596 1079 15429 37287 29834 29834 1 59362 0 VGRRPDQQLQGEGK ETQPPVALKKEGIRRVGRRPDQQLQGEGKI RVGRRPDQQLQGEGKIIDRRPERRPPRERR R V G G K I 0 2 0 1 0 3 1 3 0 0 1 1 0 0 1 0 0 0 0 1 0 0 14 2 1566.8227 Q8NC51 Q8NC51 109 122 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.0037208 131.12 By MS/MS By matching 6.6 0.8 3 1 1 4 1 28525000 28264000 261220 14597 1946 15430 37288;37289;37290;37291;37292 29835;29836 29836 2 200740 267670 VGSAAQTR KGIRPAINVGLSVSRVGSAAQTRAMKQVAG VGLSVSRVGSAAQTRAMKQVAGTMKLELAQ R V G T R A 2 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 8 0 788.41407 P25705 P25705 417 424 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0017993 145.16 By MS/MS By matching 7.86 1.46 2 1 1 2 1 6 1 36116000 36025000 90614 14598 723 15431 37293;37294;37295;37296;37297;37298;37299 29837;29838;29839 29839 3 281030 92853 VGSGSLDNLGR EKENTEQRAEEIESRVGSGSLDNLGRFRSM IESRVGSGSLDNLGRFRSMSSIPPYPASSL R V G G R F 0 1 1 1 0 0 0 3 0 0 2 0 0 0 0 2 0 0 0 1 0 0 11 0 1073.5465 Q13136 Q13136 664 674 PPFIA1 Liprin-alpha-1 yes yes 2 0.0073919 97.597 By MS/MS 3 0 1 1 988490 988490 0 14599 1356 15432 37300 29840 29840 1 18087 0 VGSKLFFDKR SCTRSVYSWDIVVQRVGSKLFFDKRDNSDF IVVQRVGSKLFFDKRDNSDFDLLTVSETAN R V G K R D 0 1 0 1 0 0 0 1 0 0 1 2 0 2 0 1 0 0 0 1 0 0 10 2 1195.6713 O15371 O15371 272 281 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.024104 82.831 By MS/MS 5.5 0.5 1 1 2 1164500 1164500 0 14600 185 15433 37301;37302 29841 29841 1 9310.2 0 VGSKTEVAECKEK HRTSVPAPLNSCLLKVGSKTEVAECKEKFA LKVGSKTEVAECKEKFAASKDPTVSQTFML K V G E K F 1 0 0 0 1 0 3 1 0 0 0 3 0 0 0 1 1 0 0 2 0 0 13 2 1463.729 Q9UKN8 Q9UKN8 120 132 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.031377 77.776 By MS/MS 4 0 1 1 0 0 0 14601 2762 15434 37303 29842 29842 1 0 0 VGSLVNAR HTEFLDEKIQPILDKVGSLVNARLEFSRGL IQPILDKVGSLVNARLEFSRGLMMLVLEKL K V G A R L 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 814.4661 Q6NUQ1 Q6NUQ1 362 369 RINT1 RAD50-interacting protein 1 yes yes 2 0.030906 89.752 By MS/MS 5.5 1.12 1 1 1 1 4 1516300 1516300 0 14602 1688 15435 37304;37305;37306;37307 29843;29844 29843 2 55481 0 VGSLYPEMSAHER YEHALSQCSVDVYKKVGSLYPEMSAHERSL KKVGSLYPEMSAHERSLDFLIELLHKDQLD K V G E R S 1 1 0 0 0 0 2 1 1 0 1 0 1 0 1 2 0 0 1 1 0 0 13 0 1474.6875 Q14203 Q14203 685 697 DCTN1 Dynactin subunit 1 yes yes 3 0.031183 80.834 By MS/MS 3 0 1 1 0 0 0 14603 1432 15436 37308 29845 29845 1 0 0 VGSRVEVIGK SGSRMSAEASARPLRVGSRVEVIGKGHRGT ARPLRVGSRVEVIGKGHRGTVAYVGATLFA R V G G K G 0 1 0 0 0 0 1 2 0 1 0 1 0 0 0 1 0 0 0 3 0 0 10 1 1042.6135 Q14203 Q14203 29 38 DCTN1 Dynactin subunit 1 yes yes 3 0.0056721 96.665 By MS/MS 3 0 1 1 241920 241920 0 14604 1432 15437 37309 29846 29846 1 4426.4 0 VGSTAVQVTSAER NALKLAHKDTKVSIKVGSTAVQVTSAERTK IKVGSTAVQVTSAERTKVLGQSVFLNDIYY K V G E R T 2 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 2 0 0 3 0 0 13 0 1303.6732 P21359 P21359 1757 1769 NF1 Neurofibromin;Neurofibromin truncated yes yes 2 0.00016382 166.7 By MS/MS 2 0 1 1 224420 224420 0 14605 678 15438 37310 29847 29847 1 75908 0 VGSTKVPMTSGVK KGAPEGVIDRCTHIRVGSTKVPMTSGVKQK IRVGSTKVPMTSGVKQKIMSVIREWGSGSD R V G V K Q 0 0 0 0 0 0 0 2 0 0 0 2 1 0 1 2 2 0 0 3 0 0 13 1 1289.7013 P16615 P16615 529 541 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.0019823 117.27 By MS/MS 2 0 1 1 186690 186690 0 14606 635 15439 37311 29848 29848 1 63146 0 VGSTSENITQK ARDFLDEYIFLAVGRVGSTSENITQKVVWV AVGRVGSTSENITQKVVWVEESDKRSFLLD R V G Q K V 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 11 0 1162.583 O00571;O15523 O00571 408 418 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 2.252E-05 161.51 By MS/MS By MS/MS 4.73 2 1 1 1 1 3 2 1 1 9 2 82612000 81910000 701820 14607 116 15440 37312;37313;37314;37315;37316;37317;37318;37319;37320;37321;37322 29849;29850;29851;29852;29853;29854;29855;29856;29857;29858 29854 10 1129400 600140 VGSVEEFQGQER LDRELRGLDDIKDLKVGSVEEFQGQERSVI DLKVGSVEEFQGQERSVILISTVRSSQSFV K V G E R S 0 1 0 0 0 2 3 2 0 0 0 0 0 1 0 1 0 0 0 2 0 0 12 0 1363.6368 Q9HCE1 Q9HCE1 862 873 MOV10 Putative helicase MOV-10 yes yes 2 0.00024914 147.28 By MS/MS 4 0 1 1 617010 617010 0 14608 2513 15441 37323 29859 29859 1 58065 0 VGSVLQEGCGK LSMQKSMQNHAAVFRVGSVLQEGCGKISKL AVFRVGSVLQEGCGKISKLYGDLKHLKTFD R V G G K I 0 0 0 0 1 1 1 3 0 0 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1132.5547 P31040 P31040 528 538 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 6.3598E-06 176.6 By MS/MS 5.5 0.5 1 1 2 3822700 3822700 0 14609 783 15442 37324;37325 29860 29860 1 37263 0 VGTECGNQK TWGGQNIGRSPFEVKVGTECGNQKVRAWGP SPFEVKVGTECGNQKVRAWGPGLEGGVVGK K V G Q K V 0 0 1 0 1 1 1 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 991.43929 P21333 P21333 570 578 FLNA Filamin-A yes yes 2 3.4541E-07 195.06 By MS/MS 2 0 1 1 212430 212430 0 14610 677 15443 37326 29861 29861 1 71851 0 VGTFFSEVKPAGPTVEQQGEMAR KVSGHVITDIVEGKKVGTFFSEVKPAGPTV KPAGPTVEQQGEMARSGGRMLATLEPEQRA K V G A R S 2 1 0 0 0 2 3 3 0 0 0 1 1 2 2 1 2 0 0 3 0 0 23 1 2464.2057 P54886 P54886 349 371 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 7.2303E-10 203.23 By MS/MS 4.67 0.471 1 2 3 10951000 10951000 0 14611 1048 15444;15445 37327;37328;37329 29862;29863 29863 580 2 156430 0 VGTVIGSNK DDKENRYWIFRSWGRVGTVIGSNKLEQMPS FRSWGRVGTVIGSNKLEQMPSKEDAIEHFM R V G N K L 0 0 1 0 0 0 0 2 0 1 0 1 0 0 0 1 1 0 0 2 0 0 9 0 873.49198 P09874 P09874 592 600 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.028713 85.161 By MS/MS 3.5 0.5 1 1 2 2099400 2099400 0 14612 543 15446 37330;37331 29864 29864 1 157820 0 VGVADEGRTDTAYR NAIQQGCRAPPYLGRVGVADEGRTDTAYRV RVGVADEGRTDTAYRVVADHIRTLSVCISD R V G Y R V 2 2 0 2 0 0 1 2 0 0 0 0 0 0 0 0 2 0 1 2 0 0 14 1 1508.7219 Q5JTZ9 Q5JTZ9 309 322 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2;3 0.017248 102.05 By MS/MS 4.33 0.471 2 1 3 3642300 3642300 0 14613 1613 15447 37332;37333;37334 29865;29866 29866 2 237920 0 VGVASSEELAR ASTSRSLALMYESEKVGVASSEELARQRGV ESEKVGVASSEELARQRGVLERTEKMVDKM K V G A R Q 2 1 0 0 0 0 2 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1116.5775 O95721 O95721 73 83 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.034069 81.95 By MS/MS 8 0 1 1 545000 545000 0 14614 423 15448 37335 29867 29867 0 6880.6 0 VGVDYEGGGCR HHDASTFTINIALNRVGVDYEGGGCRFLRY ALNRVGVDYEGGGCRFLRYNCSIRAPRKGW R V G C R F 0 1 0 1 1 0 1 4 0 0 0 0 0 0 0 0 0 0 1 2 0 0 11 0 1167.4979 Q02809 Q02809 671 681 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.0013605 114.4 By MS/MS 5 0 1 1 1728500 1728500 0 14615 1280 15449 37336 29868 29868 1 17336 0 VGVESTLER VEELNAQGLLHVFVRVGVESTLERSQITRD LHVFVRVGVESTLERSQITRDHMGQLLYQL R V G E R S 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 988.51892 O43432 O43432 1261 1269 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 6.0297E-05 180.87 By MS/MS 3 0.816 1 1 1 3 2934600 2934600 0 14616 210 15450 37337;37338;37339 29869;29870;29871 29869 3 659890 0 VGVIGFPNVGK KLLGGFQETCSKAIRVGVIGFPNVGKSSII KAIRVGVIGFPNVGKSSIINSLKQEQMCNV R V G G K S 0 0 1 0 0 0 0 3 0 1 0 1 0 1 1 0 0 0 0 3 0 0 11 0 1085.6233 Q9BVP2 Q9BVP2 257 267 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 2 0.001116 119.27 By MS/MS 5 0 1 1 844140 844140 0 14617 2337 15451 37340 29872 29872 1 8466.3 0 VGVLTVSDSCFR ATEGMILTNHDHQIRVGVLTVSDSCFRNLA QIRVGVLTVSDSCFRNLAEDRSGINLKDLV R V G F R N 0 1 0 1 1 0 0 1 0 0 1 0 0 1 0 2 1 0 0 3 0 0 12 0 1338.6602 Q9NQX3 Q9NQX3 17 28 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 2 0.00084578 128.03 By MS/MS 4 0 1 1 2099200 2099200 0 14618 2542 15452 37341 29873 29873 1 197550 0 VGVNGFGR ______________________________ ______________________________ K V G G R I 0 1 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 804.42424 P04406 P04406 6 13 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0018953 148.21 By MS/MS 2.5 1.12 1 1 1 1 4 882950 0 882950 14619 473 15453 37342;37343;37344;37345 29874 29874 1 0 493450 VGVVGLPNVGK LGNYCRLGEVRTHIRVGVVGLPNVGKSSLI THIRVGVVGLPNVGKSSLINSLKRSRACSV R V G G K S 0 0 1 0 0 0 0 3 0 0 1 1 0 0 1 0 0 0 0 4 0 0 11 0 1037.6233 Q9NVN8 Q9NVN8 255 265 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 2 0.0080662 95.815 By MS/MS 5 0 1 1 908180 908180 0 14620 2600 15454 37346 29875 29875 1 9108.5 0 VHAIPLR QDGKLIIWDSYTTNKVHAIPLRSSWVMTCA WDSYTTNKVHAIPLRSSWVMTCAYAPSGNF K V H L R S 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 7 0 804.49701 P62879;P62873;P16520 P62879 90 96 GNB2;GNB1;GNB3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 yes no 2 0.048105 91.093 By MS/MS 8 0 1 1 1345200 1345200 0 14621 1181 15455 37347 29876 29876 1 16984 0 VHDPVTAKPK MIKEGAAVIDVGINRVHDPVTAKPKLVGDV VGINRVHDPVTAKPKLVGDVDFEGVRQKAG R V H P K L 1 0 0 1 0 0 0 0 1 0 0 2 0 0 2 0 1 0 0 2 0 0 10 1 1090.6135 P13995 P13995 279 288 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 3 0.016501 83.883 By MS/MS 7.5 0.5 1 1 2 731880 731880 0 14622 610 15456 37348;37349 29877 29877 1 11222 0 VHGPGIQSGTTNKPNK FQVPVTEGCDPSRVRVHGPGIQSGTTNKPN HGPGIQSGTTNKPNKFTVETRGAGTGGLGL R V H N K F 0 0 2 0 0 1 0 3 1 1 0 2 0 0 2 1 2 0 0 1 0 0 16 1 1633.8536 P21333 P21333 1360 1375 FLNA Filamin-A yes yes 3 0.020713 73.834 By MS/MS 2 0.816 1 1 1 3 1023000 1023000 0 14623 677 15457 37350;37351;37352 29878 29878 1 271980 0 VHHKTYEDIDKR LCFAQFEPDSTEYIKVHHKTYEDIDKRGKY YIKVHHKTYEDIDKRGKYDLLRSTRYFGGM K V H K R G 0 1 0 2 0 0 1 0 2 1 0 2 0 0 0 0 1 0 1 1 0 0 12 2 1539.7794 P82650 P82650 245 256 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 4 0.021345 67.93 By MS/MS 7 0 1 1 673060 673060 0 14624 1229 15458 37353 29879 29879 1 10566 0 VHIEFTEGEDK KKGQNLAKITQQMPKVHIEFTEGEDKITLE QMPKVHIEFTEGEDKITLEGPTEDVNVAQE K V H D K I 0 0 0 1 0 0 3 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 11 0 1302.6092 Q00341 Q00341 397 407 HDLBP Vigilin yes yes 2 0.0013548 114.51 By MS/MS 3.5 0.5 1 1 2 1097600 1097600 0 14625 1260 15459 37354;37355 29880 29880 1 30955 0 VHIEIGPDGR ENDIYNFFSPLNPVRVHIEIGPDGRVTGEA LNPVRVHIEIGPDGRVTGEADVEFATHEDA R V H G R V 0 1 0 1 0 0 1 2 1 2 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1091.5724 P31943;P55795;P52597 P31943 317 326 HNRNPH1;HNRNPH2;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 2 0.044588 73.985 By MS/MS 6 0 1 1 6838500 6838500 0 14626 791;1019 15460 37356 29881 29881 1 47009 0 VHLDKAQQNNVEHK GKRIRVKLDGSRLIKVHLDKAQQNNVEHKV KVHLDKAQQNNVEHKVETFSGVYKKLTGKD K V H H K V 1 0 2 1 0 2 1 0 2 0 1 2 0 0 0 0 0 0 0 2 0 0 14 1 1658.8489 P62081 P62081 156 169 RPS7 40S ribosomal protein S7 yes yes 3;4 0.00025843 162.93 By MS/MS 9 0 2 2 7614600 7614600 0 14627 1138 15461 37357;37358 29882;29883 29882 2 149860 0 VHLQTQQEVK SCGAACCTHPLDLLKVHLQTQQEVKLRMTG LDLLKVHLQTQQEVKLRMTGMALRVVRTDG K V H V K L 0 0 0 0 0 3 1 0 1 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1208.6513 Q9UBX3 Q9UBX3 32 41 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 1.5423E-07 186.41 By MS/MS 5.5 2.87 1 1 2 2 6 14834000 14834000 0 14628 2709 15462 37359;37360;37361;37362;37363;37364 29884;29885;29886 29885 3 310000 0 VHLVGIDIFTGK VEMSTSKTGKHGHAKVHLVGIDIFTGKKYE HAKVHLVGIDIFTGKKYEDICPSTHNMDVP K V H G K K 0 0 0 1 0 0 0 2 1 2 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1297.7394 P63241;Q6IS14;Q9GZV4 P63241 56 67 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 2;3 1.5293E-06 198.61 By MS/MS 9.5 0.5 2 2 4 4092800 4092800 0 14629 1201 15463 37365;37366;37367;37368 29887;29888;29889 29888 3 196780 0 VHLVGQGAFR RYKSLRFWGSVGPARVHLVGQGAFRALRAA VGPARVHLVGQGAFRALRAALAACPSSPFP R V H F R A 1 1 0 0 0 1 0 2 1 0 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1082.5985 Q8N2G8 Q8N2G8 484 493 GHDC GH3 domain-containing protein yes yes 2 0.053741 70.525 By MS/MS 5.5 0.5 1 1 2 1955000 1955000 0 14630 1908 15464 37369;37370 29890 29890 1 13775 0 VHYKGHGK KDKFSYIGLSQNNLRVHYKGHGKTPKDAAS LSQNNLRVHYKGHGKTPKDAASVRATHPIP R V H G K T 0 0 0 0 0 0 0 2 2 0 0 2 0 0 0 0 0 0 1 1 0 0 8 1 924.49298 Q6VN20;Q96S59 Q96S59 187 194 RANBP10;RANBP9 Ran-binding protein 10;Ran-binding protein 9 no no 3 0.017857 90.777 By MS/MS 4.5 0.5 1 1 2 87611 87611 0 14631 2232;1734 15465 37371;37372 29891 29891 1 5933.6 0 VIAALLQTMEDQGNQR ATDFAPGFQKKFHEKVIAALLQTMEDQGNQ IAALLQTMEDQGNQRVQAHAAAALINFTED K V I Q R V 2 1 1 1 0 3 1 1 0 1 2 0 1 0 0 0 1 0 0 1 0 0 16 0 1785.9043 O00410 O00410 442 457 IPO5 Importin-5 yes yes 2 3.6019E-44 331.92 By MS/MS 4 0 2 2 1931400 1931400 0 14632 103 15466;15467 37373;37374 29892;29893;29894 29892 67 3 181760 0 VIAATNRVDILDPALLR LLNQLDGFQPNTQVKVIAATNRVDILDPAL AATNRVDILDPALLRSGRLDRKIEFPMPNE K V I L R S 3 2 1 2 0 0 0 0 0 2 3 0 0 0 1 0 1 0 0 2 0 0 17 1 1849.0785 P17980 P17980 328 344 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 0.00020198 172.09 By MS/MS 6.33 0.471 2 1 3 8933300 8933300 0 14633 647 15468 37375;37376;37377 29895;29896;29897 29895 3 63470 0 VIAHGKDHPTAATK QGAVISPHYDSLLVKVIAHGKDHPTAATKM KVIAHGKDHPTAATKMSRALAEFRVRGVKT K V I T K M 3 0 0 1 0 0 0 1 2 1 0 2 0 0 1 0 2 0 0 1 0 0 14 1 1444.7787 P11498 P11498 429 442 PC Pyruvate carboxylase, mitochondrial yes yes 3 0.032863 108.32 By MS/MS 3 0 1 1 206880 206880 0 14634 580 15469 37378 29898 29898 1 3785.3 0 VIALEGDIVR SLVSPKNPEQKIIKRVIALEGDIVRTIGHK KIIKRVIALEGDIVRTIGHKNRYVKVPRGH R V I V R T 1 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1083.6288 Q96T52 Q96T52 93 102 IMMP2L Mitochondrial inner membrane protease subunit 2 yes yes 2 0.0079202 99.013 By MS/MS 9.5 0.5 1 1 2 755530 755530 0 14635 2239 15470 37379;37380 29899 29899 1 17731 0 VIALGLPVPR ELDSWKIVRVSENFRVIALGLPVPRYSGNP SENFRVIALGLPVPRYSGNPLDPPLRSRFQ R V I P R Y 1 1 0 0 0 0 0 1 0 1 2 0 0 0 2 0 0 0 0 2 0 0 10 0 1033.6648 A3KMH1 A3KMH1 238 247 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00026616 142.64 By MS/MS 3 1 1 1 2 880060 880060 0 14636 14 15471 37381;37382 29900;29901 29900 2 190050 0 VIAPNPAQLQGQR SATNTTLPHMLMSQRVIAPNPAQLQGQRGP QRVIAPNPAQLQGQRGPPKPGLVRTTTPNM R V I Q R G 2 1 1 0 0 3 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 13 0 1390.7681 Q8WXI9 Q8WXI9 265 277 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.00055088 134.23 By MS/MS 5 0 1 1 2545400 2545400 0 14637 2040 15472 37383 29902 29902 1 25529 0 VICGHCK HPGPLSPEPQPMGVRVICGHCKNTFLWTEF EPQPMGVRVICGHCKNTFLWTEFTDRTLAR R V I C K N 0 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 872.39968 Q86T03 Q86T03 172 178 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 2 0.033453 102.12 By MS/MS 8 0 1 1 299280 299280 0 14638 1812 15473 37384 29903 29903 1 3778.3 0 VIDFDENTALDDAEEESFR DTVTWDEYNIQMYDRVIDFDENTALDDAEE DENTALDDAEEESFRKLHLKDKKRFEKANQ R V I F R K 2 1 1 4 0 0 4 0 0 1 1 0 0 2 0 1 1 0 0 1 0 0 19 0 2213.9601 Q14257 Q14257 130 148 RCN2 Reticulocalbin-2 yes yes 2 5.676E-106 421.33 By MS/MS By matching 6 0 2 1 1 2454400 2404000 50441 14639 1436 15474 37385;37386 29904 29904 1 16525 51688 VIDFDENTALDDAEEESFRK DTVTWDEYNIQMYDRVIDFDENTALDDAEE ENTALDDAEEESFRKLHLKDKKRFEKANQD R V I R K L 2 1 1 4 0 0 4 0 0 1 1 1 0 2 0 1 1 0 0 1 0 0 20 1 2342.055 Q14257 Q14257 130 149 RCN2 Reticulocalbin-2 yes yes 2;3 5.9166E-05 158.65 By MS/MS 6.75 0.829 2 1 1 4 18225000 18225000 0 14640 1436 15475 37387;37388;37389;37390 29905;29906;29907 29907 3 130350 0 VIDPATATSVDLR YSSLLSPMSVNAVMKVIDPATATSVDLRDI MKVIDPATATSVDLRDIKIVKKLGGTIDDC K V I L R D 2 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 2 0 0 2 0 0 13 0 1356.7249 P50991 P50991 194 206 CCT4 T-complex protein 1 subunit delta yes yes 2 4.7408E-07 192.44 By MS/MS By MS/MS 5.22 2.48 1 2 1 2 1 1 1 7 2 122350000 121920000 428080 14641 985 15476 37391;37392;37393;37394;37395;37396;37397;37398;37399 29908;29909;29910;29911;29912;29913 29908 6 1073800 311530 VIDPATATSVDLRDIK YSSLLSPMSVNAVMKVIDPATATSVDLRDI IDPATATSVDLRDIKIVKKLGGTIDDCELV K V I I K I 2 1 0 3 0 0 0 0 0 2 1 1 0 0 1 1 2 0 0 2 0 0 16 1 1712.9309 P50991 P50991 194 209 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0027089 129.76 By MS/MS 6 0 1 1 6903200 6903200 0 14642 985 15477 37400 29914 29914 1 47454 0 VIDPVAPR VVNMEWDKIWAFNKKVIDPVAPRYVALLKK IWAFNKKVIDPVAPRYVALLKKEVIPVNVP K V I P R Y 1 1 0 1 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 8 0 865.50215 P07814 P07814 499 506 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.03867 86.794 By MS/MS 3.5 0.957 1 2 2 1 6 14766000 14766000 0 14643 512 15478 37401;37402;37403;37404;37405;37406 29915;29916 29915 2 413130 0 VIDPVTGKPCAGTTYLESPLSSETTQLSK HVKHELAEIVFKVGKVIDPVTGKPCAGTTY YLESPLSSETTQLSKNLEELNISSAQ____ K V I S K N 1 0 0 1 1 1 2 2 0 1 3 2 0 0 3 4 5 0 1 2 0 0 29 1 3078.5431 Q9Y2R5 Q9Y2R5 91 119 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 3 6.8402E-14 183.24 By MS/MS 10 0 1 1 630990 630990 0 14644 2840 15479 37407 29917;29918 29917 2 34008 0 VIDQQNGLYR NCMYQACPTQDCNKKVIDQQNGLYRCEKCD DCNKKVIDQQNGLYRCEKCDTEFPNFKYRM K V I Y R C 0 1 1 1 0 2 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 10 0 1204.62 P27694 P27694 490 499 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.00030524 139.98 By MS/MS 5 0 1 1 789600 789600 0 14645 744 15480 37408 29919 29919 1 7919.3 0 VIDSSDVVVQVLDAR YKKGQSKRIWGELYKVIDSSDVVVQVLDAR VIDSSDVVVQVLDARDPMGTRSPHIETYLK K V I A R D 1 1 0 3 0 1 0 0 0 1 1 0 0 0 0 2 0 0 0 5 0 0 15 0 1613.8625 Q13823 Q13823 213 227 GNL2 Nucleolar GTP-binding protein 2 yes yes 2 0.0075929 96.059 By MS/MS 4 0 1 1 76344 76344 0 14646 1409 15481 37409 29920 29920 1 7184.5 0 VIDTQQK VDLELKKAFTELQAKVIDTQQKVKLADIQI AFTELQAKVIDTQQKVKLADIQIEQLNRTK K V I Q K V 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 7 0 830.44978 O60925 O60925 20 26 PFDN1 Prefoldin subunit 1 yes yes 2 0.047397 91.626 By MS/MS 10 0 1 1 498520 498520 0 14647 286 15482 37410 29921 29921 1 26868 0 VIEALQGMFIR GKLGHGDTNRVYKPKVIEALQGMFIRKVCA YKPKVIEALQGMFIRKVCAGSQSSLALTST K V I I R K 1 1 0 0 0 1 1 1 0 2 1 0 1 1 0 0 0 0 0 1 0 0 11 0 1275.7009 Q15751 Q15751 607 617 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 0.019161 83.998 By MS/MS 2 0 1 1 0 0 0 14648 1529 15483 37411 29922 29922 872 1 0 0 VIEAVSEELSR VFTISKELVPRVLSKVIEAVSEELSRLMQC VLSKVIEAVSEELSRLMQCVSSFSKNGALQ K V I S R L 1 1 0 0 0 0 3 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1230.6456 Q96KP1 Q96KP1 828 838 EXOC2 Exocyst complex component 2 yes yes 2 2.252E-05 161.51 By MS/MS 4 0 1 1 1319800 1319800 0 14649 2189 15484 37412 29923 29923 1 124200 0 VIEAYCTSAK RKSTAALEEDAQILKVIEAYCTSAKTRQTL AQILKVIEAYCTSAKTRQTLNSTWQGTDLM K V I A K T 2 0 0 0 1 0 1 0 0 1 0 1 0 0 0 1 1 0 1 1 0 0 10 0 1140.5485 Q14155 Q14155 716 725 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 0.0027028 110.76 By MS/MS 5 0 1 1 723590 723590 0 14650 1423 15485 37413 29924 29924 1 7257.3 0 VIECSYTSADGQR RRTDGRCLIWGRKPKVIECSYTSADGQRHH PKVIECSYTSADGQRHHSKLLVSGFWGVAR K V I Q R H 1 1 0 1 1 1 1 1 0 1 0 0 0 0 0 2 1 0 1 1 0 0 13 0 1484.6566 Q9UBM7 Q9UBM7 377 389 DHCR7 7-dehydrocholesterol reductase yes yes 2 1.5816E-11 261.35 By MS/MS By MS/MS 4.77 3.19 3 2 1 1 3 1 1 1 11 2 9803600 9754400 49169 14651 2701 15486 37414;37415;37416;37417;37418;37419;37420;37421;37422;37423;37424;37425;37426 29925;29926;29927;29928;29929;29930;29931;29932;29933 29928 9 1019000 74909 VIEEEWQQVDR DASELSFPFHESILKVIEEEWQQVDRQLPS SILKVIEEEWQQVDRQLPSLACKYPVSSRE K V I D R Q 0 1 0 1 0 2 3 0 0 1 0 0 0 0 0 0 0 1 0 2 0 0 11 0 1429.6838 P42166 P42166 501 511 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 2.6334E-05 163.84 By MS/MS 5 0 1 1 2031600 2031600 0 14652 875 15487 37427 29934 29934 1 20376 0 VIEEQLEPAVEK VIEPQYFGLAYLFRKVIEEQLEPAVEKISI FRKVIEEQLEPAVEKISIMAERLANQFAIY K V I E K I 1 0 0 0 0 1 4 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1382.7293 P42704 P42704 1225 1236 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.9203E-06 208.17 By MS/MS 4 1.41 1 1 1 1 1 5 29619000 29619000 0 14653 886 15488 37428;37429;37430;37431;37432 29935;29936;29937;29938;29939 29935 5 825090 0 VIEGDVVSALNK HYNQLFGDVCFHCNRVIEGDVVSALNKAWC CNRVIEGDVVSALNKAWCVNCFACSTCNTK R V I N K A 1 0 1 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 3 0 0 12 0 1242.682 P48059 P48059 258 269 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 2 1.5257E-06 198.62 By MS/MS 9 0.816 1 1 1 3 4583800 4583800 0 14654 933 15489 37433;37434;37435 29940 29940 1 62848 0 VIELENWTEGK MNAFSGVMMLQLLEKVIELENWTEGKGLIV LLEKVIELENWTEGKGLIVRGAKNTFSSGS K V I G K G 0 0 1 0 0 0 3 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 11 0 1316.6612 Q9NTX5 Q9NTX5 90 100 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 2.0028E-05 163.84 By MS/MS 8 0 1 1 1036300 1036300 0 14655 2578 15490 37436 29941 29941 1 13083 0 VIELQEIISK RSSDGSLSHEEDLAKVIELQEIISKQSREQ EDLAKVIELQEIISKQSREQSQMKERLASL K V I S K Q 0 0 0 0 0 1 2 0 0 3 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1170.686 Q13136 Q13136 252 261 PPFIA1 Liprin-alpha-1 yes yes 2 0.00042812 134.68 By MS/MS 3 0 1 1 141330 141330 0 14656 1356 15491 37437 29942 29942 1 2586 0 VIEPGCVR HLDGRQIVVKYPPGKVIEPGCVRVVRGEGM VKYPPGKVIEPGCVRVVRGEGMPQYRNPFE K V I V R V 0 1 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 2 0 0 8 0 928.48004 O60884 O60884 303 310 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.053097 81.297 By MS/MS 6.5 0.5 1 1 2 8392400 8392400 0 14657 285 15492 37438;37439 29943;29944 29943 2 116950 0 VIFLEDDDVAAVVDGR YFASDASAVIEHTNRVIFLEDDDVAAVVDG IFLEDDDVAAVVDGRLSIHRIKRTAGDHPG R V I G R L 2 1 0 4 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 4 0 0 16 0 1731.8679 Q06210 Q06210 291 306 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.00050998 185.57 By MS/MS 5 0 1 1 139800 139800 0 14658 1295 15493 37440 29945 29945 1 1402.1 0 VIFLENYR ADVVNNDPMVGSKLKVIFLENYRVSLAEKV MVGSKLKVIFLENYRVSLAEKVIPATDLSE K V I Y R V 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 P06737;P11216 P06737 643 650 PYGL;PYGB Glycogen phosphorylase, liver form;Glycogen phosphorylase, brain form no no 2 0.006314 119.41 By MS/MS 4.5 0.5 1 1 2 1152900 1152900 0 14659 501 15494 37441;37442 29946 29946 1 96148 0 VIGELVGHTER VGPGAGESPGTPPFRVIGELVGHTERVSGF PPFRVIGELVGHTERVSGFTFSHHPGQYNL R V I E R V 0 1 0 0 0 0 2 2 1 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1208.6513 Q8TEQ6 Q8TEQ6 56 66 GEMIN5 Gem-associated protein 5 yes yes 2 0.0009992 121.6 By MS/MS 2.5 0.5 1 1 2 1327600 1327600 0 14660 2002 15495 37443;37444 29947 29947 1 63420 0 VIGIECSSISDYAVK TGILCMFAAKAGARKVIGIECSSISDYAVK VIGIECSSISDYAVKIVKANKLDHVVTIIK K V I V K I 1 0 0 1 1 0 1 1 0 3 0 1 0 0 0 3 0 0 1 2 0 0 15 0 1639.8127 Q99873 Q99873 114 128 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.00040313 134.75 By MS/MS 7 0 1 1 730100 730100 0 14661 2271 15496 37445 29948 29948 1 11461 0 VIGLSSDLQQVGGASAR IGVDLIMKTCFSPNRVIGLSSDLQQVGGAS GLSSDLQQVGGASARIQDALSTVLQYAEDV R V I A R I 2 1 0 1 0 2 0 3 0 1 2 0 0 0 0 3 0 0 0 2 0 0 17 0 1656.8795 O00303 O00303 262 278 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2;3 1.0777E-23 247.73 By MS/MS By MS/MS 6.07 2.29 1 1 1 1 4 4 1 1 1 13 2 203050000 202660000 393000 14662 99 15497 37446;37447;37448;37449;37450;37451;37452;37453;37454;37455;37456;37457;37458;37459;37460 29949;29950;29951;29952;29953;29954;29955;29956;29957;29958;29959;29960 29949 11 2450200 572000 VIGMHYFSPVDK LPISEIAAVSKRPEKVIGMHYFSPVDKMQL PEKVIGMHYFSPVDKMQLLEIITTEKTSKD K V I D K M 0 0 0 1 0 0 0 1 1 1 0 1 1 1 1 1 0 0 1 2 0 0 12 0 1391.6908 P40939 P40939 494 505 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0047059 104.42 By MS/MS 5 0 1 1 882080 882080 0 14663 865 15498 37461 29961 29961 1 8846.8 0 VIGSGCNLDSAR LTYVTWKLSGLPKHRVIGSGCNLDSARFRY KHRVIGSGCNLDSARFRYLMAEKLGIHPSS R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 P00338;Q6ZMR3;P07864;P07195 P07195 159 170 LDHA;LDHAL6A;LDHC;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase B chain no no 2 6.9973E-05 161.19 By MS/MS By MS/MS 8 0.707 1 2 1 3 1 12595000 12595000 0 14664 506;440 15499 37462;37463;37464;37465 29962;29963;29964;29965 29964 4 183570 0 VIGTLLGTVDK SIVDSYERRNEGAARVIGTLLGTVDKHSVE GAARVIGTLLGTVDKHSVEVTNCFSVPHNE R V I D K H 0 0 0 1 0 0 0 2 0 1 2 1 0 0 0 0 2 0 0 2 0 0 11 0 1114.6598 O00303 O00303 116 126 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 5.9895E-13 225.87 By MS/MS By MS/MS 6.67 0.745 3 2 1 4 2 44765000 44536000 229380 14665 99 15500 37466;37467;37468;37469;37470;37471 29966;29967;29968;29969;29970 29969 5 476000 321480 VIGVLEPLDPEDYTK FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK VIGVLEPLDPEDYTKLEFSDETFGSNIPKQ K V I T K L 0 0 0 2 0 0 2 1 0 1 2 1 0 0 2 0 1 0 1 2 0 0 15 0 1686.8716 Q96RP9 Q96RP9 552 566 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0046208 115.29 By MS/MS 6.5 1.5 1 1 2 1769100 1769100 0 14666 2223 15501 37472;37473 29971;29972 29971 2 17743 0 VIHAGEK CGKSFQKFSHLTQHKVIHAGEKPYTCEECG FSHLTQHKVIHAGEKPYTCEECGKAFKWSL K V I E K P 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 752.41809 Q15928 Q15928 191 197 ZNF141 Zinc finger protein 141 yes yes 2 0.031909 103.28 By MS/MS 5 0 1 1 1341000 1341000 0 14667 1540 15502 37474 29973 29973 1 13450 0 VIHALSENELCVR AMNHRNNAIPKSAIRVIHALSENELCVRAM IRVIHALSENELCVRAMASLETIGPLMNGM R V I V R A 1 1 1 0 1 0 2 0 1 1 2 0 0 0 0 1 0 0 0 2 0 0 13 0 1538.7875 O75165 O75165 2072 2084 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.00076166 128.08 By MS/MS 2 0 1 1 438690 438690 0 14668 302 15503 37475 29974 29974 1 148380 0 VIHECQQR EIRCRKYLHPSSYTKVIHECQQRMVADHLQ HPSSYTKVIHECQQRMVADHLQFLHAECHN K V I Q R M 0 1 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 1068.5135 Q13617 Q13617 262 269 CUL2 Cullin-2 yes yes 2 0.03867 86.794 By MS/MS 4 0 1 1 409840 409840 0 14669 1403 15504 37476 29975 29975 1 38569 0 VIHLAGQWEK NLAKLQLVVENSAQRVIHLAGQWEKHRVPL NSAQRVIHLAGQWEKHRVPLLAEYRHLRKL R V I E K H 1 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1179.64 O60826 O60826 414 423 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.048864 72.879 By MS/MS 5 0 1 1 682850 682850 0 14670 280 15505 37477 29976 29976 1 6848.6 0 VIHSILNSPYAK EHYIPRAVLLDLEPRVIHSILNSPYAKLYN EPRVIHSILNSPYAKLYNPENIYLSEHGGG R V I A K L 1 0 1 0 0 0 0 0 1 2 1 1 0 0 1 2 0 0 1 1 0 0 12 0 1340.7452 P23258;Q9NRH3 P23258 73 84 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 3 0.0067504 95.094 By MS/MS 6.5 0.5 1 1 2 2089600 2089600 0 14671 701 15506 37478;37479 29977;29978 29978 2 32802 0 VIIEKYYTR ______________________________ VKKAARVIIEKYYTRLGNDFHTNKRVCEEI R V I T R L 0 1 0 0 0 0 1 0 0 2 0 1 0 0 0 0 1 0 2 1 0 0 9 1 1183.6601 P08708 P08708 15 23 RPS17 40S ribosomal protein S17 yes yes 2 0.00013419 175.91 By MS/MS By matching 9.33 0.471 2 1 2 1 19879000 19772000 107670 14672 527 15507 37480;37481;37482 29979;29980 29979 2 625300 245510 VIIIGSGVSGLAAAR IYKRIKPLPTKKTGKVIIIGSGVSGLAAAR VIIIGSGVSGLAAARQLQSFGMDVTLLEAR K V I A R Q 3 1 0 0 0 0 0 3 0 3 1 0 0 0 0 2 0 0 0 2 0 0 15 0 1382.8245 O60341 O60341 281 295 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.00019828 176.78 By MS/MS 4 0 1 1 957760 957760 0 14673 255 15508 37483 29981 29981 1 90132 0 VIILSLDR EMRAPKHFLPEMLSKVIILSLDRSDEDKEK LPEMLSKVIILSLDRSDEDKEKASSLISLL K V I D R S 0 1 0 1 0 0 0 0 0 2 2 0 0 0 0 1 0 0 0 1 0 0 8 0 927.57532 P78344 P78344 585 592 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0039801 130.22 By MS/MS 5 0.816 1 1 1 3 7112200 7112200 0 14674 1219 15509 37484;37485;37486 29982;29983 29982 2 562560 0 VIISNSAYGK QEVDVIPEDGAADVRVIISNSAYGKFRKLF AADVRVIISNSAYGKFRKLFPG________ R V I G K F 1 0 1 0 0 0 0 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 10 0 1050.571 O43824 O43824 500 509 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0014511 122.33 By MS/MS 6 0 1 1 4367900 4367900 0 14675 240 15510 37487 29984 29984 1 30026 0 VIITNFPAAK NDTAPRAMAVLESLRVIITNFPAAKSLDIQ LESLRVIITNFPAAKSLDIQVPNFPADETK R V I A K S 2 0 1 0 0 0 0 0 0 2 0 1 0 1 1 0 1 0 0 1 0 0 10 0 1072.6281 P47897 P47897 577 586 QARS Glutamine--tRNA ligase yes yes 2 0.0007671 128.12 By MS/MS 4.5 0.5 1 1 2 4217000 4217000 0 14676 928 15511 37488;37489 29985 29985 1 332240 0 VIIVGLDNAGK LFTRIWRLFNHQEHKVIIVGLDNAGKTTIL QEHKVIIVGLDNAGKTTILYQFSMNEVVHT K V I G K T 1 0 1 1 0 0 0 2 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1097.6445 Q9Y689;Q96KC2 Q9Y689 19 29 ARL5A;ARL5B ADP-ribosylation factor-like protein 5A;ADP-ribosylation factor-like protein 5B yes no 2 0.005702 102.06 By MS/MS 9.5 0.5 1 1 2 972980 972980 0 14677 2185 15512 37490;37491 29986 29986 1 29761 0 VILDLTPNYR DFDSLLQSAKKKSIRVILDLTPNYRGENSW KKSIRVILDLTPNYRGENSWFSTQVDTVAT R V I Y R G 0 1 1 1 0 0 0 0 0 1 2 0 0 0 1 0 1 0 1 1 0 0 10 0 1202.6659 P08195 P08195 304 313 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0012962 117.89 By MS/MS 5 0.816 1 1 1 3 7428000 7428000 0 14678 519 15513 37492;37493;37494 29987;29988;29989 29987 2 277660 0 VILHLKEDQTEYLEER TVRADHGEPIGRGTKVILHLKEDQTEYLEE ILHLKEDQTEYLEERRVKEVVKKHSQFIGY K V I E R R 0 1 0 1 0 1 4 0 1 1 3 1 0 0 0 0 1 0 1 1 0 0 16 1 2014.0371 P07900;Q58FF6;P08238;Q58FF7 P08238 181 196 HSP90AA1;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 3 0.0006584 124.78 By MS/MS 5 0.816 1 1 1 3 7015600 7015600 0 14679 521;513 15514 37495;37496;37497 29990;29991;29992 29992 2 383110 0 VILIQEQLSK PLDPGGYFIVKGVEKVILIQEQLSKNRIIV KGVEKVILIQEQLSKNRIIVEADRKGAVGA K V I S K N 0 0 0 0 0 2 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1169.702 Q9NW08 Q9NW08 177 186 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.00030244 140.17 By MS/MS 3.5 0.5 1 1 2 1797800 1797800 0 14680 2607 15515 37498;37499 29993 29993 1 79926 0 VILLDVAR SPCNTLAAVTDDFGRVILLDVARGIAIRMW VTDDFGRVILLDVARGIAIRMWKGYRDAQI R V I A R G 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 8 0 897.56475 Q9H2M9 Q9H2M9 408 415 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.020455 96.492 By MS/MS 3.5 0.5 1 1 2 1324400 1324400 0 14681 2431 15516 37500;37501 29994 29994 1 41266 0 VILLENLTR HTELNSVNVMPSASRVILLENLTRFWPIIQ MPSASRVILLENLTRFWPIIQIRIKRCQQG R V I T R F 0 1 1 0 0 0 1 0 0 1 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1069.6495 Q14999 Q14999 932 940 CUL7 Cullin-7 yes yes 2 0.00060852 143.37 By MS/MS 2 0 1 1 209920 209920 0 14682 1464 15517 37502 29995 29995 1 71003 0 VILLGDGGVGK ______________________________ SLFKVILLGDGGVGKSSLMNRYVTNKFDTQ K V I G K S 0 0 0 1 0 0 0 4 0 1 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1026.6073 P51151;Q9NP90 P51151 10 20 RAB9A;RAB9B Ras-related protein Rab-9A;Ras-related protein Rab-9B yes no 2 0.00021416 136.99 By MS/MS 9 0.816 1 1 1 3 3055300 3055300 0 14683 991 15518 37503;37504;37505 29996 29996 1 63998 0 VIMVTGDHPITAK AVPDAVGKCRSAGIKVIMVTGDHPITAKAI IKVIMVTGDHPITAKAIAKGVGIISEGNET K V I A K A 1 0 0 1 0 0 0 1 1 2 0 1 1 0 1 0 2 0 0 2 0 0 13 0 1380.7435 P05023;P13637;P50993;Q13733;P20648;P54707 P05023 613 625 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP4A;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Potassium-transporting ATPase alpha chain 2 no no 2;3 6.1948E-07 203.02 By MS/MS 2.2 0.98 3 3 3 1 10 5790500 5790500 0 14684 481;1046 15519;15520 37506;37507;37508;37509;37510;37511;37512;37513;37514;37515 29997;29998;29999;30000;30001;30002 30000 188 6 1183700 0 VINEPTAAALAYGLDK ATKDAGQISGLNVLRVINEPTAAALAYGLD INEPTAAALAYGLDKSEDKVIAVYDLGGGT R V I D K S 4 0 1 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 1 1 0 0 16 0 1644.8723 P38646 P38646 219 234 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 4.9122E-11 263.98 By MS/MS By MS/MS 5.71 1.28 1 3 1 1 1 6 1 21227000 21116000 111160 14685 850 15521 37516;37517;37518;37519;37520;37521;37522 30003;30004;30005;30006;30007 30005 5 233440 93349 VINLNDNTFTEK ITALAQAFAVNPLLRVINLNDNTFTEKGAV LLRVINLNDNTFTEKGAVAMAETLKTLRQV R V I E K G 0 0 3 1 0 0 1 0 0 1 1 1 0 1 0 0 2 0 0 1 0 0 12 0 1406.7042 P46060 P46060 240 251 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 4.9878E-06 177.04 By MS/MS 4.5 0.5 1 1 2 18749000 18749000 0 14686 908 15522 37523;37524 30008;30009 30009 2 370960 0 VIPLISDAGLR FRKQSHPEIISYLEKVIPLISDAGLRWRLT YLEKVIPLISDAGLRWRLTDLCTKIQRGTH K V I L R W 1 1 0 1 0 0 0 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 11 0 1152.6867 Q6P1Q0 Q6P1Q0 201 211 LETMD1 LETM1 domain-containing protein 1 yes yes 2 0.0081408 106.18 By MS/MS 8 0 1 1 354760 354760 0 14687 1702 15523 37525 30010 30010 1 4478.8 0 VIQAGMFDQK KILAAAKYKLNVDQKVIQAGMFDQKSSSHE NVDQKVIQAGMFDQKSSSHERRAFLQAILE K V I Q K S 1 0 0 1 0 2 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 0 10 0 1135.5696 P51532;P51531 P51532 1228 1237 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 0.048718 81.95 By MS/MS 2 0 1 1 388710 388710 0 14688 995 15524 37526 30011 30011 0 131480 0 VIQALAMKGDVENIEVVQK VLDQQQTPSRLAVTRVIQALAMKGDVENIE LAMKGDVENIEVVQKMLNGLEDSIGLSKMV R V I Q K M 2 0 1 1 0 2 2 1 0 2 1 2 1 0 0 0 0 0 0 4 0 0 19 1 2083.1347 P42704 P42704 1145 1163 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 5.9313E-05 176.17 By MS/MS By matching 3.75 0.829 2 1 1 3 1 2609600 2495400 114170 14689 886 15525 37527;37528;37529;37530 30012;30013 30013 474 2 156420 14532 VIQCFAETGQVQK TLALSVYLRANVPNKVIQCFAETGQVQKIV NKVIQCFAETGQVQKIVLYAKKVGYTPDWI K V I Q K I 1 0 0 0 1 3 1 1 0 1 0 1 0 1 0 0 1 0 0 2 0 0 13 0 1506.7501 Q00610 Q00610 488 500 CLTC Clathrin heavy chain 1 yes yes 2 5.8393E-33 293.88 By MS/MS 2.5 1.12 1 1 1 1 4 2674800 2674800 0 14690 1262 15526 37531;37532;37533;37534 30014;30015;30016 30016 3 340180 0 VIQEGLEGLVLK KRVTKALDLADMITRVIQEGLEGLVLKDVK ITRVIQEGLEGLVLKDVKGTYEPGKRHWLK R V I L K D 0 0 0 0 0 1 2 2 0 1 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1296.7653 P49916 P49916 649 660 LIG3 DNA ligase 3 yes yes 2 5.9457E-05 164.48 By MS/MS 4.5 0.5 1 1 2 529810 529810 0 14691 969 15527 37535;37536 30017 30017 1 35691 0 VIQENEHALQK PEIQKEHRNLLQELKVIQENEHALQKDALS QELKVIQENEHALQKDALSIKLKLEQIDGH K V I Q K D 1 0 1 0 0 2 2 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1307.6834 Q9NTJ3 Q9NTJ3 999 1009 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 5.1184E-05 156.16 By MS/MS 3 0 1 1 466810 466810 0 14692 2575 15528 37537 30018 30018 1 8541.3 0 VIQHNALEDR IKRHKWNDFAEDSLRVIQHNALEDRSISDK EDSLRVIQHNALEDRSISDKQQWDAAIYFM R V I D R S 1 1 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1193.6153 O60313 O60313 724 733 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0065657 102.06 By MS/MS 4.5 0.5 1 1 2 1207400 1207400 0 14693 254 15529 37538;37539 30019 30019 1 91070 0 VIQIATSSSTAK RALTQFPLPKNLLAKVIQIATSSSTAKNLM LAKVIQIATSSSTAKNLMQFHTVGTKTKLS K V I A K N 2 0 0 0 0 1 0 0 0 2 0 1 0 0 0 3 2 0 0 1 0 0 12 0 1204.6663 Q7L2E3 Q7L2E3 252 263 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 1.4632E-05 178.53 By MS/MS 5 1.58 1 1 1 1 4 4724900 4724900 0 14694 1761 15530 37540;37541;37542;37543 30020;30021;30022 30021 2 137220 0 VIQNIIYYK FGHEEEVISNPLSPRVIQNIIYYKCNTHDE NPLSPRVIQNIIYYKCNTHDEREAVIQQEL R V I Y K C 0 0 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 2 1 0 0 9 0 1152.6543 Q93100 Q93100 830 838 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 8.9727E-07 181.81 By MS/MS 4 0 1 1 944550 944550 0 14695 2089 15531 37544 30023 30023 1 88888 0 VIQQESYTYK KDVRKRRQVLKDLVKVIQQESYTYKDPITE KDLVKVIQQESYTYKDPITEFVECLYVNFD K V I Y K D 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 1 1 0 2 1 0 0 10 0 1257.6241 P60228 P60228 280 289 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00067304 142 By MS/MS 7 0 1 1 0 0 0 14696 1090 15532 37545 30024 30024 1 0 0 VIQSCFLSNR SPNMTEREAANFIMKVIQSCFLSNRSRTYD NFIMKVIQSCFLSNRSRTYDMIQYYQNDIP K V I N R S 0 1 1 0 1 1 0 0 0 1 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1222.6128 P42356;A4QPH2 P42356 2077 2086 PI4KA;PI4KAP2 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2 yes no 2 0.049686 75.509 By MS/MS 2 0 1 1 362140 362140 0 14697 880 15533 37546 30025 30025 0 122490 0 VIQVAAGSSNLK DVDKVAFTGSTEIGRVIQVAAGSSNLKRVT IGRVIQVAAGSSNLKRVTLELGGKSPNIIM R V I L K R 2 0 1 0 0 1 0 1 0 1 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1185.6717 P05091 P05091 269 280 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00097596 134.13 By MS/MS 6 0 1 1 1304900 1304900 0 14698 485 15534 37547 30026 30026 1 8970.4 0 VIQVAAGSSNLKR DVDKVAFTGSTEIGRVIQVAAGSSNLKRVT GRVIQVAAGSSNLKRVTLELGGKSPNIIMS R V I K R V 2 1 1 0 0 1 0 1 0 1 1 1 0 0 0 2 0 0 0 2 0 0 13 1 1341.7728 P05091 P05091 269 281 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00092684 155.33 By MS/MS 6 0 1 1 832670 832670 0 14699 485 15535 37548 30027 30027 1 5724 0 VIQYLAYVASSHK CTGESGAGKTENTKKVIQYLAYVASSHKSK KKVIQYLAYVASSHKSKKDQGELERQLLQA K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579 P35579 187 199 MYH9 Myosin-9 yes yes 3 0.025329 79.466 By MS/MS 2 0 1 1 178910 178910 0 14700 824 15536 37549 30028 30028 1 60513 0 VISEPGEAEVFMTPEDFVR YSTPDKIFRYFATLKVISEPGEAEVFMTPE PGEAEVFMTPEDFVRSITPNEKQPEHLGLD K V I V R S 1 1 0 1 0 0 4 1 0 1 0 0 1 2 2 1 1 0 0 3 0 0 19 0 2151.0194 Q9BPX6 Q9BPX6 136 154 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 6.9852E-05 176.87 By MS/MS 6 0 1 1 455210 455210 0 14701 2281 15537 37550 30029 30029 1 3129.2 0 VISESPPDQWEAR EKLYRPPPVLDALGRVISESPPDQWEARCG GRVISESPPDQWEARCGLALALNKLSQYLD R V I A R C 1 1 0 1 0 1 2 0 0 1 0 0 0 0 2 2 0 1 0 1 0 0 13 0 1512.7209 Q92616 Q92616 1222 1234 GCN1L1 Translational activator GCN1 yes yes 2 2.8377E-24 279.9 By MS/MS 2 0.816 1 1 1 3 2153600 2153600 0 14702 2064 15538 37551;37552;37553 30030;30031 30031 2 504230 0 VISFEEQVASIR AKEIYHFTLEKIQPRVISFEEQVASIRQHL QPRVISFEEQVASIRQHLASIYEKEEDWRN R V I I R Q 1 1 0 0 0 1 2 0 0 2 0 0 0 1 0 2 0 0 0 2 0 0 12 0 1376.73 Q9BT78 Q9BT78 96 107 COPS4 COP9 signalosome complex subunit 4 yes yes 2 0.0035463 119.03 By MS/MS 7 0 1 1 1946800 1946800 0 14703 2315 15539 37554 30032 30032 0 30561 0 VISFIENTSTPVDR MTVALKTKSVNVREKVISFIENTSTPVDRM KVISFIENTSTPVDRMSFNLPWPDRSCTER K V I D R M 0 1 1 1 0 0 1 0 0 2 0 0 0 1 1 2 2 0 0 2 0 0 14 0 1576.8097 Q9NUY8 Q9NUY8 505 518 TBC1D23 TBC1 domain family member 23 yes yes 2 7.1903E-17 263.07 By MS/MS 5 0 1 1 590060 590060 0 14704 2587 15540 37555 30033 30033 1 5918 0 VISSANR ETKKTRVKLPSGSKKVISSANRAVVGVVAG KLPSGSKKVISSANRAVVGVVAGGGRIDKP K V I N R A 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 7 0 745.40825 P62917 P62917 157 163 RPL8 60S ribosomal protein L8 yes yes 2 0.043363 94.662 By MS/MS By matching 8 0 2 1 1 2285500 2256100 29363 14705 1187 15541 37556;37557 30034 30034 1 28483 39624 VISSVSYYTHR SSFNGKMNALNEVNKVISSVSYYTHRHGNP EVNKVISSVSYYTHRHGNPEEEEWLTAERM K V I H R H 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 3 1 0 2 2 0 0 11 0 1310.6619 Q93008;O00507 Q93008 361 371 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.00012104 128.86 By MS/MS 2 0 1 1 549850 549850 0 14706 2085 15542 37558 30035 30035 1 185980 0 VITEEEKNFK PVMPVRNVYKKEKARVITEEEKNFKAFASL KEKARVITEEEKNFKAFASLRMARANARLF R V I F K A 0 0 1 0 0 0 3 0 0 1 0 2 0 1 0 0 1 0 0 1 0 0 10 1 1235.6398 P26373 P26373 168 177 RPL13 60S ribosomal protein L13 yes yes 2 0.00054398 153.24 By MS/MS 7.5 0.5 1 1 2 3925100 3925100 0 14707 731 15543 37559;37560 30036 30036 1 49824 0 VITEYLNAQESAK GLVMVEVRKEKQFQKVITEYLNAQESAKSA QKVITEYLNAQESAKSARLNLWRYGDFRAD K V I A K S 2 0 1 0 0 1 2 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 13 0 1464.746 Q7KZF4 Q7KZF4 874 886 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 4.6189E-08 241.39 By MS/MS By MS/MS 4 0 2 1 1 7551800 7480900 70974 14708 1755 15544 37561;37562 30037;30038 30038 2 704000 151220 VITIMQNPR LTKRAGELTEDEVERVITIMQNPRQYKIPD EDEVERVITIMQNPRQYKIPDWFLNRQKDV R V I P R Q 0 1 1 0 0 1 0 0 0 2 0 0 1 0 1 0 1 0 0 1 0 0 9 0 1070.5906 P62269 P62269 67 75 RPS18 40S ribosomal protein S18 yes yes 2 3.4541E-07 195.06 By MS/MS By MS/MS 9.29 0.452 5 2 6 1 115380000 115170000 209220 14709 1149 15545;15546 37563;37564;37565;37566;37567;37568;37569 30039;30040;30041;30042;30043;30044;30045;30046 30044 653 8 2557200 477080 VITMFVQR NSIPGIESPFEQAKKVITMFVQRQVFAENK PFEQAKKVITMFVQRQVFAENKDEIALVLF K V I Q R Q 0 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 0 0 2 0 0 8 0 992.54772 P13010 P13010 37 44 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.046531 83.206 By MS/MS 4.5 0.5 1 1 2 1045500 1045500 0 14710 597 15547 37570;37571 30047 30047 278 1 55880 0 VITNFNSAHDTDR GTLNTALRSLGIPSRVITNFNSAHDTDRNL SRVITNFNSAHDTDRNLSVDVYYDPMGNPL R V I D R N 1 1 2 2 0 0 0 0 1 1 0 0 0 1 0 1 2 0 0 1 0 0 13 0 1488.6957 Q08188 Q08188 293 305 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 2 0.02013 92.112 By MS/MS 3 0 1 1 101450 0 101450 14711 1306 15548 37572 30048 30048 1 0 12913 VITVDGNICTGK LLGDKASKRLTERSRVITVDGNICTGKGKL RSRVITVDGNICTGKGKLAKEIAEKLGFKH R V I G K G 0 0 1 1 1 0 0 2 0 2 0 1 0 0 0 0 2 0 0 2 0 0 12 0 1275.6493 O95299 O95299 59 70 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.00033187 141.89 By MS/MS 7 0 1 1 1636600 1636600 0 14712 404 15549 37573 30049 30049 1 25692 0 VIVDFSSPNIAK LVNGVQLPALGENKKVIVDFSSPNIAKEMH NKKVIVDFSSPNIAKEMHVGHLRSTIIGES K V I A K E 1 0 1 1 0 0 0 0 0 2 0 1 0 1 1 2 0 0 0 2 0 0 12 0 1288.7027 P54136 P54136 194 205 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 5.5588E-05 184.71 By MS/MS 5.33 1.25 1 1 1 3 13966000 13966000 0 14713 1043 15550 37574;37575;37576 30050;30051 30051 2 187030 0 VIYEGLTNYEK SKYEELECLYAAVGKVIYEGLTNYEKATNA AVGKVIYEGLTNYEKATNANPSQLFGTLMI K V I E K A 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 1 0 2 1 0 0 11 0 1327.666 Q9Y4A5 Q9Y4A5 2249 2259 TRRAP Transformation/transcription domain-associated protein yes yes 2 9.822E-05 152.04 By MS/MS 1.5 0.5 1 1 2 448550 448550 0 14714 2890 15551 37577;37578 30052;30053 30052 2 131440 0 VKADQDSEAMKR KQVAASTAQLLVACKVKADQDSEAMKRLQA ACKVKADQDSEAMKRLQAAGNAVKRASDNL K V K K R L 2 1 0 2 0 1 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 12 2 1376.6718 Q9Y490 Q9Y490 2444 2455 TLN1 Talin-1 yes yes 3 0.026358 72.289 By MS/MS 2 0 1 1 0 0 0 14715 2888 15552 37579 30054 30054 1202 1 0 0 VKADRDESSPYAAMLAAQDVAQR LSGKETICRVTGGMKVKADRDESSPYAAML SPYAAMLAAQDVAQRCKELGITALHIKLRA K V K Q R C 6 2 0 3 0 2 1 0 0 0 1 1 1 0 1 2 0 0 1 2 0 0 23 2 2491.2125 P62263 P62263 62 84 RPS14 40S ribosomal protein S14 yes yes 3;4 1.0031E-08 201.96 By MS/MS 10 0 2 2 3180800 3180800 0 14716 1147 15553 37580;37581 30055;30056;30057 30055 652 3 171430 0 VKDAQQVEPEGQEKPSPATVR KPGPIGKERSLKNRKVKDAQQVEPEGQEKP VEPEGQEKPSPATVRSTDPVTTKETKAVSE K V K V R S 2 1 0 1 0 3 3 1 0 0 0 2 0 0 3 1 1 0 0 3 0 0 21 2 2292.171 Q9Y520 Q9Y520 2128 2148 PRRC2C Protein PRRC2C yes yes 3;4 0.0058273 78.708 By MS/MS 1.5 0.5 2 2 4 612000 612000 0 14717 2905 15554 37582;37583;37584;37585 30058;30059 30058 2 179190 0 VKDASPNQVAEK DHSYVIAGYYQANERVKDASPNQVAEKVAS NERVKDASPNQVAEKVASRIAEGFSDTALI R V K E K V 2 0 1 1 0 1 1 0 0 0 0 2 0 0 1 1 0 0 0 2 0 0 12 1 1284.6674 O43402 O43402 99 110 EMC8 ER membrane protein complex subunit 8 yes yes 2;3 3.3092E-05 194.48 By MS/MS 9.5 0.5 2 2 4 2721700 2721700 0 14718 208 15555 37586;37587;37588;37589 30060;30061 30060 2 59612 0 VKDDIESLHDK IRGAIREYQTQLIQRVKDDIESLHDKFKVQ LIQRVKDDIESLHDKFKVQYPQSQACKMSH R V K D K F 0 0 0 3 0 0 1 0 1 1 1 2 0 0 0 1 0 0 0 1 0 0 11 1 1297.6514 Q14204 Q14204 612 622 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0052772 95.094 By MS/MS 1.5 0.5 1 1 2 583950 583950 0 14719 1433 15556 37590;37591 30062 30062 1 164730 0 VKDLIVSGDEK ALHQHTISTLHWSPRVKDLIVSGDEKGVVF WSPRVKDLIVSGDEKGVVFCYWFNRNDSQH R V K E K G 0 0 0 2 0 0 1 1 0 1 1 2 0 0 0 1 0 0 0 2 0 0 11 1 1201.6554 Q8TEQ6 Q8TEQ6 121 131 GEMIN5 Gem-associated protein 5 yes yes 2 0.02472 103.91 By MS/MS 3 0 1 1 345750 345750 0 14720 2002 15557 37592 30063 30063 1 6326.3 0 VKDVCEDLVR LDGRFHYGTAFGGSKVKDVCEDLVRHGYNY FGGSKVKDVCEDLVRHGYNYLGKDYVTSGI K V K V R H 0 1 0 2 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 10 1 1231.6231 Q9NW08 Q9NW08 969 978 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 3 0.0023251 166.66 By MS/MS 3 0 1 1 730470 730470 0 14721 2607 15558 37593 30064 30064 1 13366 0 VKEGMNIVEAMER AKTEWLDGKHVVFGKVKEGMNIVEAMERFG GKVKEGMNIVEAMERFGSRNGKTSKKITIA K V K E R F 1 1 1 0 0 0 3 1 0 1 0 1 2 0 0 0 0 0 0 2 0 0 13 1 1504.7378 P62937 P62937 132 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2;3 0.0075989 110.92 By MS/MS 10 0 4 4 634600 634600 0 14722 1188 15559;15560;15561 37594;37595;37596;37597 30065;30066;30067;30068 30068 688;689 4 34203 0 VKELQAEQEDR LAANLDRAKAGLLERVKELQAEQEDRALRS LLERVKELQAEQEDRALRSFKLSVTVDPKY R V K D R A 1 1 0 1 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 11 1 1343.6681 Q00341 Q00341 1038 1048 HDLBP Vigilin yes yes 2 1.2407E-05 180.19 By MS/MS 3 0.816 1 1 1 3 3162200 3162200 0 14723 1260 15562 37598;37599;37600 30069 30069 1 113560 0 VKGGGHVAQIYAIR LLGKERFAGVDIRVRVKGGGHVAQIYAIRQ RVKGGGHVAQIYAIRQSISKALVAYYQKYV R V K I R Q 2 1 0 0 0 1 0 3 1 2 0 1 0 0 0 0 0 0 1 2 0 0 14 1 1467.831 P62249 P62249 72 85 RPS16 40S ribosomal protein S16 yes yes 2;3;4 0.0036724 130.01 By MS/MS 9.75 0.433 1 3 4 7880900 7880900 0 14724 1145 15563 37601;37602;37603;37604 30070;30071;30072;30073 30070 4 418440 0 VKGHFGPINSVAFHPDGK EARFFHLAFEEEFGRVKGHFGPINSVAFHP HFGPINSVAFHPDGKSYSSGGEDGYVRIHY R V K G K S 1 0 1 1 0 0 0 3 2 1 0 2 0 2 2 1 0 0 0 2 0 0 18 1 1905.985 Q13347 Q13347 281 298 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 4 0.00092351 104.26 By MS/MS 7.5 0.5 1 1 2 2968200 2968200 0 14725 1372 15564 37605;37606 30074 30074 1 45151 0 VKHEVSGETVVFQGGALGK ELVSTLVETLMTGKRVKHEVSGETVVFQGG VSGETVVFQGGALGKTPDGQGLSTYKELCS R V K G K T 1 0 0 0 0 1 2 4 1 0 1 2 0 1 0 1 1 0 0 4 0 0 19 1 1941.032 Q5VYK3 Q5VYK3 1038 1056 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 6.1733E-05 132.4 By MS/MS 2 0 1 1 935850 935850 0 14726 1656 15565 37607 30075 30075 1 316540 0 VKKLEEVER ERAKREEELREYQERVKKLEEVERKKRQRE REYQERVKKLEEVERKKRQRELEIEERERR R V K E R K 0 1 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 9 2 1128.6503 Q14152 Q14152 848 856 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.018967 114.97 By MS/MS 3.5 1.5 1 1 2 2 1 1 8 38457000 38457000 0 14727 1422 15566 37608;37609;37610;37611;37612;37613;37614;37615 30076;30077;30078;30079 30077 4 1315900 0 VKLDSPAGTALSPSGHTK EQVSPAAIKKTILDKVKLDSPAGTALSPSG DSPAGTALSPSGHTKLLPRSLAPAGKD___ K V K T K L 2 0 0 1 0 0 0 2 1 0 2 2 0 0 2 3 2 0 0 1 0 0 18 1 1764.937 P32322 P32322 290 307 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.0027659 95.9 By MS/MS 8 0 1 1 4647700 4647700 0 14728 797 15567 37616 30080 30080 1 58677 0 VKLEEQLKETVEK KADPPATEKTLLEEKVKLEEQLKETVEKYK EKVKLEEQLKETVEKYKRALADTENLRQRS K V K E K Y 0 0 0 0 0 1 4 0 0 0 2 3 0 0 0 0 1 0 0 2 0 0 13 2 1571.877 Q9HAV7 Q9HAV7 65 77 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2;3 1.1001E-16 263.29 By MS/MS 9 0 2 2 3376200 3376200 0 14729 2496 15568 37617;37618 30081;30082 30082 2 66445 0 VKLESPTVSTLTPSSPGK EKISPAALKKTLLDRVKLESPTVSTLTPSS ESPTVSTLTPSSPGKLLTRSLALGGKKD__ R V K G K L 0 0 0 0 0 0 1 1 0 0 2 2 0 0 3 4 3 0 0 2 0 0 18 1 1826.9989 Q96C36 Q96C36 290 307 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 4.3263E-16 283.66 By MS/MS 8 1.1 2 2 1 5 25776000 25776000 0 14730 2120 15569 37619;37620;37621;37622;37623 30083;30084;30085;30086 30085 4 344840 0 VKLLLQVQHASK VAAAISKTAVAPIERVKLLLQVQHASKQIT IERVKLLLQVQHASKQITADKQYKGIIDCV R V K S K Q 1 0 0 0 0 2 0 0 1 0 3 2 0 0 0 1 0 0 0 2 0 0 12 1 1362.8347 P05141;P12235;P12236 P05141 32 43 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3;4 3.2047E-06 192.44 By MS/MS 7.1 2.91 1 1 1 3 3 1 10 17263000 17263000 0 14731 487;589;588 15570 37624;37625;37626;37627;37628;37629;37630;37631;37632;37633 30087;30088;30089;30090;30091;30092;30093 30091 7 1207100 0 VKLQEMEGTVK ENARQQLERQNKELKVKLQEMEGTVKSKYK KELKVKLQEMEGTVKSKYKASITALEAKIA K V K V K S 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 1 0 0 2 0 0 11 1 1260.6748 P35579 P35579 1792 1802 MYH9 Myosin-9 yes yes 2 0.0011551 140.17 By MS/MS 2 0 1 1 256950 256950 0 14732 824 15571 37634 30094 30094 1 86910 0 VKLSSLNLDDHAK GPSVRNPRARVVVLRVKLSSLNLDDHAKKK LRVKLSSLNLDDHAKKKLIKLVGERYCKTT R V K A K K 1 0 1 2 0 0 0 0 1 0 3 2 0 0 0 2 0 0 0 1 0 0 13 1 1438.778 P82673 P82673 175 187 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 3 3.2038E-05 178.84 By MS/MS 7 0 1 1 4741900 4741900 0 14733 1232 15572 37635 30095 30095 1 74439 0 VKLTNAEGVEFK ITINKDQNVFDSKKKVKLTNAEGVEFKLSK KKKVKLTNAEGVEFKLSKKQLQAIEFNKAL K V K F K L 1 0 1 0 0 0 2 1 0 0 1 2 0 1 0 0 1 0 0 2 0 0 12 1 1333.7242 O76094 O76094 286 297 SRP72 Signal recognition particle subunit SRP72 yes yes 2;3 0.0053319 119.03 By MS/MS 5 0 2 2 2716700 2716700 0 14734 362 15573 37636;37637 30096;30097 30097 2 27247 0 VKNSLLSLSDT QLYDTLNAWKQNLNKVKNSLLSLSDT____ NLNKVKNSLLSLSDT_______________ K V K D T - 0 0 1 1 0 0 0 0 0 0 3 1 0 0 0 3 1 0 0 1 0 0 11 1 1175.6398 Q7L2H7 Q7L2H7 364 374 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 2.2967E-13 246.59 By MS/MS 8.5 1.12 1 1 1 1 4 11705000 11705000 0 14735 1762 15574 37638;37639;37640;37641 30098 30098 1 189170 0 VKPAPDETSFSEALLK HIPFDFYLCEMAFPRVKPAPDETSFSEALL KPAPDETSFSEALLKRNQDLAPNSAEQASI R V K L K R 2 0 0 1 0 0 2 0 0 0 2 2 0 1 2 2 1 0 0 1 0 0 16 1 1730.9091 Q12905 Q12905 44 59 ILF2 Interleukin enhancer-binding factor 2 yes yes 3 0.0066213 89.506 By MS/MS 7 0 1 1 1749400 1749400 0 14736 1338 15575 37642 30099 30099 1 27463 0 VKPLLQVSR YLKLRNWQWWRLFTKVKPLLQVSRQEEEMM WRLFTKVKPLLQVSRQEEEMMAKEEELVKV K V K S R Q 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 1 0 0 0 2 0 0 9 1 1038.655 P35579 P35579 834 842 MYH9 Myosin-9 yes yes 3 0.026461 79.489 By MS/MS 2 0 1 1 548270 548270 0 14737 824 15576 37643 30100 30100 1 185450 0 VKQDMPPPGGYGPIDYK ______________________________ QDMPPPGGYGPIDYKRNLPRRGLSGYSMLA K V K Y K R 0 0 0 2 0 1 0 3 0 1 0 2 1 0 4 0 0 0 2 1 0 0 17 1 1860.908 Q9P0J0 Q9P0J0 6 22 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 3 0.00036525 163.44 By MS/MS 10 0 1 1 694650 694650 0 14738 2664 15577 37644 30101;30102 30102 1133 2 37439 0 VKQDMPPPGGYGPIDYKR ______________________________ DMPPPGGYGPIDYKRNLPRRGLSGYSMLAI K V K K R N 0 1 0 2 0 1 0 3 0 1 0 2 1 0 4 0 0 0 2 1 0 0 18 2 2017.0091 Q9P0J0 Q9P0J0 6 23 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 3;4 0.00029767 144.68 By MS/MS 10 0 2 2 919670 919670 0 14739 2664 15578 37645;37646 30103;30104 30103 1133 2 49567 0 VKSKALLK AIRIRILCCLTFLVKVKSKALLKNRLLPPL CLTFLVKVKSKALLKNRLLPPLLHTLFPIV K V K L K N 1 0 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 0 1 0 0 8 2 885.60114 Q8TEX9 Q8TEX9 277 284 IPO4 Importin-4 yes yes 1 0.054626 15.439 By MS/MS 9 0 1 1 108890 0 108890 14740 2005 15579 37647 30105 30105 1 0 248300 VKSSDEAVILCK DPNVALTFLEKTREKVKSSDEAVILCKTAI REKVKSSDEAVILCKTAIGALKLNIGDLQV K V K C K T 1 0 0 1 1 0 1 0 0 1 1 2 0 0 0 2 0 0 0 2 0 0 12 1 1347.7068 Q9UNM6 Q9UNM6 104 115 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 3 0.0039179 100.09 By MS/MS 7 0 1 1 798030 798030 0 14741 2791 15580 37648 30106;30107 30107 2 12528 0 VKVDEVGGEALGR LSAEEKAAVTSLFAKVKVDEVGGEALGRLL AKVKVDEVGGEALGRLLVVYPWTQRFFESF K V K G R L 1 1 0 1 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 3 0 0 13 1 1327.7096 CON__Q3SX09;CON__P02070 CON__Q3SX09 73 85 yes no 2 0.0036919 130.69 By MS/MS 10 0 1 1 321200 321200 0 + 14742 63 15581 37649 30108 30108 1 17312 0 VKVEPSHDASK MVLFADQATPTSPIRVKVEPSHDASKVKAE SPIRVKVEPSHDASKVKAEGPGLSRTGVEL R V K S K V 1 0 0 1 0 0 1 0 1 0 0 2 0 0 1 2 0 0 0 2 0 0 11 1 1195.6197 P21333 P21333 864 874 FLNA Filamin-A yes yes 2;3 0.0013911 135.99 By MS/MS 2.17 1.07 2 2 1 1 6 1867600 1867600 0 14743 677 15582 37650;37651;37652;37653;37654;37655 30109;30110;30111 30111 3 519660 0 VKVETYNDESR VFQNANFRSFIFRVRVKVETYNDESRIKAT FRVRVKVETYNDESRIKATVMDVKPVDYRE R V K S R I 0 1 1 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 1 2 0 0 11 1 1338.6416 P27694 P27694 576 586 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 6.8284E-06 185.99 By MS/MS 5 0 1 1 1523900 1523900 0 14744 744 15583 37656 30112 30112 1 15284 0 VKVNKDDIQK VGEEAIVELVENGKKVKVNKDDIQKMNPPK ENGKKVKVNKDDIQKMNPPKFSKVEDMAEL K V K Q K M 0 0 1 2 0 1 0 0 0 1 0 3 0 0 0 0 0 0 0 2 0 0 10 2 1185.6717 P35579 P35579 65 74 MYH9 Myosin-9 yes yes 3 0.046046 70.412 By MS/MS By matching 2 0 2 1 1 345850 326040 19812 14745 824 15584 37657;37658 30113 30113 1 110280 28018 VLAAVQAAR VVSDGRGLFLEGKERVLAAVQAARNANIFV LEGKERVLAAVQAARNANIFVIFVVLDNPS R V L A R N 4 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 897.5396 Q9NU22 Q9NU22 5509 5517 MDN1 Midasin yes yes 2 0.0059292 107.59 By MS/MS 1 0 1 1 240720 240720 0 14746 2580 15585 37659 30114 30114 1 58006 0 VLACGLNEFNK QCGCDGTFLLTQSGKVLACGLNEFNKLGLN QSGKVLACGLNEFNKLGLNQCMSGIINHEA K V L N K L 1 0 2 0 1 0 1 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1263.6282 Q8TD19 Q8TD19 553 563 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.0052503 103.26 By MS/MS 4 0 1 1 3568800 3568800 0 14747 1995 15586 37660 30115 30115 1 335850 0 VLADLAIYEPK LIGNLVKCQVELNRKVLADLAIYEPKTFKS LNRKVLADLAIYEPKTFKSLAALASRRRHE K V L P K T 2 0 0 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 11 0 1230.686 Q9BYC9 Q9BYC9 101 111 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 5.2872E-05 174.41 By MS/MS 9 0 1 1 4710100 4710100 0 14748 2367 15587 37661 30116 30116 1 92695 0 VLAEPVPLPADPMELK RRKWKLNLIAELESRVLAEPVPLPADPMEL LAEPVPLPADPMELKNLEYRPVKVRGCFDH R V L L K N 2 0 0 1 0 0 2 0 0 0 3 1 1 0 4 0 0 0 0 2 0 0 16 0 1717.9324 Q15526 Q15526 98 113 SURF1 Surfeit locus protein 1 yes yes 2 0.01246 88.101 By MS/MS 8 0 1 1 147100 147100 0 14749 1518 15588 37662 30117 30117 1 1857.1 0 VLAGLIR ______________________________ ______________________________ M V L I R K 1 1 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 740.49086 Q86VV8 Q86VV8 2 8 RTTN Rotatin yes yes 2 0.018308 113.82 By MS/MS 8 0 1 1 1325300 1325300 0 14750 1833 15589 37663 30118 30118 1 16731 0 VLAGLYMGR NKAIITALGVERRNRVLAGLYMGRSDTQLV VERRNRVLAGLYMGRSDTQLVVRQASLHVW R V L G R S 1 1 0 0 0 0 0 2 0 0 2 0 1 0 0 0 0 0 1 1 0 0 9 0 978.53207 Q92616 Q92616 1885 1893 GCN1L1 Translational activator GCN1 yes yes 2 0.00082647 135.87 By MS/MS 2.2 0.748 1 2 2 5 3111900 3111900 0 14751 2064 15590;15591 37664;37665;37666;37667;37668 30119;30120;30121 30119 1001 3 932350 0 VLAIAQNFV PIPTSLRKREGEYSKVLAIAQNFV______ EGEYSKVLAIAQNFV_______________ K V L F V - 2 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 973.55967 Q6P1L8 Q6P1L8 137 145 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 0.00045117 148.21 By MS/MS 10 0 1 1 804730 804730 0 14752 1699 15592 37669 30122;30123 30123 2 43372 0 VLAINILGR TVLTIMDIKSESGLRVLAINILGRFLLNND SESGLRVLAINILGRFLLNNDKNIRYVALT R V L G R F 1 1 1 0 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 967.61785 O43747 O43747 307 315 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.00061721 143.11 By MS/MS 4 0 1 1 398710 398710 0 14753 231 15593 37670 30124 30124 1 37522 0 VLALTETCLVER VVQKISPRHSEPVKRVLALTETCLVERDPA VKRVLALTETCLVERDPATYNIATLKPLGE R V L E R D 1 1 0 0 1 0 2 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1402.749 O75165 O75165 254 265 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.6022E-13 246.86 By MS/MS 2 0 1 1 358240 358240 0 14754 302 15594 37671 30125 30125 1 121170 0 VLANNSLSFEK GSFKEALNVINTHTKVLANNSLSFEKAYCE THTKVLANNSLSFEKAYCEYRLNRIENALK K V L E K A 1 0 2 0 0 0 1 0 0 0 2 1 0 1 0 2 0 0 0 1 0 0 11 0 1220.6401 O76094 O76094 74 84 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.0088141 83.883 By MS/MS 5 0 1 1 10329000 10329000 0 14755 362 15595 37672 30126 30126 1 103590 0 VLANPGNSQVAR AAVENLPTFLVELSRVLANPGNSQVARVAA LSRVLANPGNSQVARVAAGLQIKNSLTSKD R V L A R V 2 1 2 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1224.6575 Q14974 Q14974 43 54 KPNB1 Importin subunit beta-1 yes yes 2 5.9537E-06 184.71 By MS/MS 6.67 1.97 1 1 1 1 1 1 6 11715000 11715000 0 14756 1462 15596 37673;37674;37675;37676;37677;37678 30127;30128;30129;30130;30131 30127 5 894210 0 VLAQNSGFDLQETLVK LGVQAFADALLIIPKVLAQNSGFDLQETLV LAQNSGFDLQETLVKIQAEHSESGQLVGVD K V L V K I 1 0 1 1 0 2 1 1 0 0 3 1 0 1 0 1 1 0 0 2 0 0 16 0 1760.9309 P40227 P40227 450 465 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 4.6237E-33 302.63 By MS/MS By MS/MS 5.45 2.27 1 1 1 1 4 1 1 1 10 1 132350000 132220000 122490 14757 858 15597 37679;37680;37681;37682;37683;37684;37685;37686;37687;37688;37689 30132;30133;30134;30135;30136;30137;30138;30139;30140;30141;30142;30143 30142 11 1054600 125520 VLAQQGEYSEAIPILR EHQPDNIKALFRKGKVLAQQGEYSEAIPIL LAQQGEYSEAIPILRAALKLEPSNKTIHAE K V L L R A 2 1 0 0 0 2 2 1 0 2 2 0 0 0 1 1 0 0 1 1 0 0 16 0 1785.9625 Q14318 Q14318 315 330 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 6.6805E-07 206.74 By MS/MS 6 2.58 1 1 1 1 1 1 6 18720000 18720000 0 14758 1438 15598 37690;37691;37692;37693;37694;37695 30144;30145;30146;30147;30148;30149 30145 6 152640 0 VLATAFDTTLGGR AYQVSVCAFNRGKLKVLATAFDTTLGGRKF LKVLATAFDTTLGGRKFDEVLVNHFCEEFG K V L G R K 2 1 0 1 0 0 0 2 0 0 2 0 0 1 0 0 3 0 0 1 0 0 13 0 1320.7038 P34932 P34932 222 234 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 6.4217E-17 261.87 By MS/MS 4 0 1 1 2135100 2135100 0 14759 810 15599 37696 30150 30150 1 200920 0 VLATQPGPGR GDEPLNFLDPKVAQRVLATQPGPGRGRKKD KVAQRVLATQPGPGRGRKKDHGFKVSADGR R V L G R G 1 1 0 0 0 1 0 2 0 0 1 0 0 0 2 0 1 0 0 1 0 0 10 0 994.55598 Q5JTH9 Q5JTH9 1129 1138 RRP12 RRP12-like protein yes yes 2 0.010513 93.178 By MS/MS 3 0 1 1 1186100 1186100 0 14760 1610 15600 37697 30151 30151 1 21702 0 VLATTFDPYLGGR AYQVLVCAFNKGKLKVLATTFDPYLGGRNF LKVLATTFDPYLGGRNFDEALVDYFCDEFK K V L G R N 1 1 0 1 0 0 0 2 0 0 2 0 0 1 1 0 2 0 1 1 0 0 13 0 1408.7351 O95757 O95757 222 234 HSPA4L Heat shock 70 kDa protein 4L yes yes 2 0.00021918 160.77 By MS/MS 4 0 1 1 1118400 1118400 0 14761 424 15601 37698 30152 30152 1 105250 0 VLATVTKPVGGDK YSAAKSKVEKKKKEKVLATVTKPVGGDKNG EKVLATVTKPVGGDKNGGTRVVKLRKMPRY K V L D K N 1 0 0 1 0 0 0 2 0 0 1 2 0 0 1 0 2 0 0 3 0 0 13 1 1283.7449 Q02878 Q02878 88 100 RPL6 60S ribosomal protein L6 yes yes 2 0.00079055 167.11 By MS/MS 7 0 1 1 2720600 2720600 0 14762 1281 15602 37699 30153 30153 1 42708 0 VLCELADLQDK ATILKLLEVEHPAAKVLCELADLQDKEVGD PAAKVLCELADLQDKEVGDGTTSVVIIAAE K V L D K E 1 0 0 2 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1302.649 P17987 P17987 74 84 TCP1 T-complex protein 1 subunit alpha yes yes 2 9.9619E-06 173.24 By MS/MS By MS/MS 5 3.22 1 1 2 1 4 1 7836600 7763400 73269 14763 648 15603 37700;37701;37702;37703;37704 30154;30155;30156;30157;30158 30157 4 182470 75080 VLCQGLK ELTVSNNDINEAGVRVLCQGLKDSPCQLEA DINEAGVRVLCQGLKDSPCQLEALKLESCG R V L L K D 0 0 0 0 1 1 0 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 7 0 816.45276 P13489 P13489 189 195 RNH1 Ribonuclease inhibitor yes yes 2 0.03591 100.27 By MS/MS By matching 7 0 2 1 1 995060 988670 6393.4 14764 601 15604 37705;37706 30159 30159 1 15520 11514 VLCSYDYR VTPGGFDQINPATNRVLCSYDYRNIEGFVD INPATNRVLCSYDYRNIEGFVDLSDYQGGF R V L Y R N 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 2 1 0 0 8 0 1074.4804 O75165 O75165 147 154 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.012568 107.9 By MS/MS 2 0 1 1 495450 495450 0 14765 302 15605 37707 30160 30160 1 167580 0 VLCYYGSQEER DNWLREVNLWCPTLKVLCYYGSQEERKQIR PTLKVLCYYGSQEERKQIRFNIHSRYEDYN K V L E R K 0 1 0 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 2 1 0 0 11 0 1402.6187 Q9H4L7 Q9H4L7 573 583 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 1.3962E-06 185.81 By MS/MS By matching 3 0 2 1 1 1307300 888030 419310 14766 2449 15606 37708;37709 30161 30161 1 16248 53372 VLDAIIQEK EEAKSSLAMNRSRGKVLDAIIQEKKSGRIP NRSRGKVLDAIIQEKKSGRIPGIYGRLGDL K V L E K K 1 0 0 1 0 1 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1027.5914 Q9NTJ3 Q9NTJ3 599 607 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.014186 103.55 By MS/MS 2.5 0.5 1 1 2 1842400 1842400 0 14767 2575 15607 37710;37711 30162 30162 1 66300 0 VLDALVAR LQSRLAALGRQVGARVLDALVAREKGARRE GRQVGARVLDALVAREKGARRETKVLGALL R V L A R E 2 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 855.5178 Q8IUR0 Q8IUR0 65 72 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.025808 93.195 By MS/MS By matching 5.22 2.97 1 1 1 1 2 1 1 1 4 5 7149600 3939500 3210100 14768 1859 15608 37712;37713;37714;37715;37716;37717;37718;37719;37720 30163 30163 1 79306 3668400 VLDDGELLVQQTK YIMNGIIKWGDPVTRVLDDGELLVQQTKNS TRVLDDGELLVQQTKNSDRTPLVSVLLEGP R V L T K N 0 0 0 2 0 2 1 1 0 0 3 1 0 0 0 0 1 0 0 2 0 0 13 0 1456.7773 P46459 P46459 517 529 NSF Vesicle-fusing ATPase yes yes 2 1.8691E-13 218.55 By MS/MS By MS/MS 5.86 2.42 1 2 1 1 1 1 6 1 24200000 23983000 216660 14769 912 15609 37721;37722;37723;37724;37725;37726;37727 30164;30165;30166;30167;30168;30169;30170;30171 30164 8 277890 181950 VLDELTLAR NLRMSVEADINGLRRVLDELTLARADLEMQ INGLRRVLDELTLARADLEMQIESLKEELA R V L A R A 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1028.5866 CON__Q04695;Q04695;CON__P02533;P02533;CON__Q6IFX2;CON__P08779;P08779 CON__P02533 224 232 KRT17;KRT14;KRT16 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 1.9362E-10 209.84 By MS/MS By MS/MS 5.17 2.83 2 2 2 2 2 2 2 1 1 2 8 10 50461000 41021000 9439800 + 14770 39;47;57 15610 37728;37729;37730;37731;37732;37733;37734;37735;37736;37737;37738;37739;37740;37741;37742;37743;37744;37745 30172;30173;30174;30175;30176;30177;30178;30179;30180;30181;30182;30183;30184;30185;30186;30187;30188;30189;30190 30184 19 2952300 6282300 VLDELTLTK ALRQSVEADINGLRRVLDELTLTKADLEMQ INGLRRVLDELTLTKADLEMQIESLTEELA R V L T K A 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 9 0 1030.591 CON__P13645;P13645 CON__P13645 258 266 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.9268E-05 175.51 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 136240000 76449000 59788000 + 14771 50 15611 37746;37747;37748;37749;37750;37751;37752;37753;37754;37755;37756;37757;37758;37759;37760;37761;37762;37763;37764;37765 30191;30192;30193;30194;30195;30196;30197;30198;30199;30200;30201;30202;30203;30204;30205;30206;30207;30208;30209;30210;30211;30212 30208 22 5808400 38930000 VLDGYVISQK FDYRPYIVSWCLNLRVLDGYVISQKESLKA CLNLRVLDGYVISQKESLKAEWLYSQGKGR R V L Q K E 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1120.6128 Q8IW35 Q8IW35 232 241 CEP97 Centrosomal protein of 97 kDa yes yes 2 0.0010339 122.96 By MS/MS 3.5 0.5 1 1 2 810210 810210 0 14772 1865 15612 37766;37767 30213 30213 1 46879 0 VLDILKK EQRNRETAPRTIFQRVLDILKKSSHAVELA APRTIFQRVLDILKKSSHAVELACRDPSQV R V L K K S 0 0 0 1 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 7 1 827.54804 Q9UBB4 Q9UBB4 50 56 ATXN10 Ataxin-10 yes yes 2 0.042839 128.86 By MS/MS 7 0 1 1 1452700 1452700 0 14773 2693 15613 37768 30214 30214 1 22806 0 VLDLDLFR ______________________________ ______________________________ M V L F R V 0 1 0 2 0 0 0 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 8 0 989.55458 P49591 P49591 2 9 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 0.0063425 119.27 By MS/MS 6 0 1 1 648370 648370 0 14774 952 15614 37769 30215 30215 1 4457 0 VLDLLDPASGDLVIR ALSVTMSYLEIYQEKVLDLLDPASGDLVIR VLDLLDPASGDLVIREDCRGNILIPGLSQK K V L I R E 1 1 0 3 0 0 0 1 0 1 4 0 0 0 1 1 0 0 0 2 0 0 15 0 1594.893 Q14807 Q14807 184 198 KIF22 Kinesin-like protein KIF22 yes yes 2 0.0010885 121.68 By MS/MS 5 0 1 1 55108 55108 0 14775 1458 15615 37770 30216;30217 30216 2 552.71 0 VLDLQADSR VPQMKEPIEDLSPDRVLDLQADSRLHVIFG DLSPDRVLDLQADSRLHVIFGGTKVVQHIP R V L S R L 1 1 0 2 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 Q9HD20 Q9HD20 372 380 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.006851 105.98 By MS/MS By matching 1.5 0.5 2 2 2 2 555600 414350 141250 14776 2517 15616 37771;37772;37773;37774 30218;30219 30219 2 140150 179060 VLDLQQIK DEVDKRVHMTWVQPRVLDLQQIKGMKDRLE MTWVQPRVLDLQQIKGMKDRLEFWCTDVKS R V L I K G 0 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 955.57023 Q9UNM6 Q9UNM6 340 347 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0074201 114.28 By MS/MS 7 0 1 1 12901000 12901000 0 14777 2791 15617 37775 30220 30220 1 202510 0 VLDQVFYQR NELFYTERAHVRTLKVLDQVFYQRVSREGI HVRTLKVLDQVFYQRVSREGILSPSELRKI K V L Q R V 0 1 0 1 0 2 0 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 9 0 1166.6084 Q9NZN5 Q9NZN5 808 816 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.022024 99.688 By MS/MS 2.5 0.5 1 1 2 255300 255300 0 14778 2652 15618 37776;37777 30221 30221 1 52441 0 VLDSGAPIKIPVGPETLGR TIAMDGTEGLVRGQKVLDSGAPIKIPVGPE GAPIKIPVGPETLGRIMNVIGEPIDERGPI K V L G R I 1 1 0 1 0 0 1 3 0 2 2 1 0 0 3 1 1 0 0 2 0 0 19 1 1918.0888 P06576 P06576 125 143 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 6.6076E-05 166.64 By MS/MS By MS/MS 7.25 1.3 3 2 2 1 7 1 179040000 178890000 151120 14779 497 15619 37778;37779;37780;37781;37782;37783;37784;37785 30222;30223;30224;30225;30226;30227;30228;30229;30230;30231 30229 10 1349000 154850 VLDTKWTLLQEQGTK ASFIDKVRFLEQQNKVLDTKWTLLQEQGTK VLDTKWTLLQEQGTKTVRQNLEPLFEQYIN K V L T K T 0 0 0 1 0 2 1 1 0 0 3 2 0 0 0 0 3 1 0 1 0 0 15 1 1758.9516 CON__P13647;P13647;CON__P04259;CON__P48668;P48668 CON__P13647 195 209 KRT5;KRT6C Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C no no 2;3 8.261E-40 254.89 By matching By MS/MS 3.33 0.471 2 1 1 2 1027500 506270 521230 + 14780 52;44;56 15620 37786;37787;37788 30232;30233;30234 30233 3 47644 66345 VLDVGFVGR RCRYLQPRWTDFPGRVLDVGFVGRWWVLGA TDFPGRVLDVGFVGRWWVLGAWMRDCDIND R V L G R W 0 1 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 9 0 960.53927 Q9BSF4 Q9BSF4 163 171 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.0009371 134.81 By MS/MS 9 0.816 1 1 1 3 5968600 5968600 0 14781 2305 15621 37789;37790;37791 30235;30236 30235 2 80406 0 VLDWICR EAGHFLWPGFGENARVLDWICRRLEGEDSA PGFGENARVLDWICRRLEGEDSARETPIGL R V L C R R 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 7 0 960.48512 Q16822 Q16822 554 560 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.02911 105.39 By MS/MS 5.5 0.5 1 1 2 2246500 2246500 0 14782 1560 15622 37792;37793 30237 30237 1 20264 0 VLEAAAQAAR LLEMDARLHEDHLERVLEAAAQAARDVHTL DHLERVLEAAAQAARDVHTLLDRVVRQHVR R V L A R D 5 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 998.55089 Q9NPD3 Q9NPD3 213 222 EXOSC4 Exosome complex component RRP41 yes yes 2 1.8652E-05 168.8 By MS/MS 8 0 1 1 1287200 1287200 0 14783 2531 15623 37794 30238 30238 1 16250 0 VLEALLPLK ICFFVQQFTDMEHNRVLEALLPLKGLEERV DMEHNRVLEALLPLKGLEERVAAAVDLIIK R V L L K G 1 0 0 0 0 0 1 0 0 0 4 1 0 0 1 0 0 0 0 1 0 0 9 0 994.64267 P49327 P49327 2383 2391 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.007083 105.57 By MS/MS 4.88 2.71 1 1 1 1 1 1 1 1 8 2694500 2694500 0 14784 946 15624 37795;37796;37797;37798;37799;37800;37801;37802 30239;30240;30241;30242 30242 4 615640 0 VLEALLPLKGLEER ICFFVQQFTDMEHNRVLEALLPLKGLEERV RVLEALLPLKGLEERVAAAVDLIIKSHQGL R V L E R V 1 1 0 0 0 0 3 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 14 1 1578.9345 P49327 P49327 2383 2396 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.002787 113.77 By MS/MS 2.67 0.943 2 1 3 596200 596200 0 14785 946 15625 37803;37804;37805 30243;30244;30245;30246 30244 4 168730 0 VLEALQVLR LLLQQKYLEYLEDGKVLEALQVLRCELTPL YLEDGKVLEALQVLRCELTPLKYNTERIHV K V L L R C 1 1 0 0 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 9 0 1039.639 Q9H7D7 Q9H7D7 229 237 WDR26 WD repeat-containing protein 26 yes yes 2 0.00018086 156.51 By MS/MS 4.5 0.5 1 1 2 1192100 1192100 0 14786 2461 15626 37806;37807 30247 30247 1 36902 0 VLEANEMLIK V L I K 1 0 1 0 0 0 2 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 10 0 1158.6318 REV__Q9Y2D8 yes yes 2 0.035478 78.77 By MS/MS 1.5 0.5 1 1 2 1038600 1038600 0 + 14787 2991 15627 37808;37809 30248;30249 30249 1230 2 319270 0 VLEDGKQQVQVVGLQER SGKVFDLLNRKTKLRVLEDGKQQVQVVGLQ EDGKQQVQVVGLQEREVKCVEDVLKLIDIG R V L E R E 0 1 0 1 0 4 2 2 0 0 2 1 0 0 0 0 0 0 0 4 0 0 17 1 1924.0378 O00139 O00139 386 402 KIF2A Kinesin-like protein KIF2A yes yes 3 0.00021771 170.78 By MS/MS 4 0 1 1 1168800 1168800 0 14788 82 15628 37810 30250;30251 30250 2 109990 0 VLEDSDLK LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI TMKPVQKVLEDSDLKKSDIDEIVLVGGSTR K V L L K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 917.47058 P11021 P11021 345 352 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0052487 124.34 By MS/MS By matching 5 0 2 1 1 9289500 8999600 289890 14789 571 15629 37811;37812 30252 30252 1 90261 243450 VLEDSDLKK LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI MKPVQKVLEDSDLKKSDIDEIVLVGGSTRI K V L K K S 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 9 1 1045.5655 P11021 P11021 345 353 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.0045135 119.21 By MS/MS By MS/MS 5 0 3 2 1 10078000 10022000 56622 14790 571 15630 37813;37814;37815 30253;30254;30255 30255 3 100510 47551 VLEDSDLKKSDIDEIVLVGGSTR LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K V L T R I 0 1 0 4 0 0 2 2 0 2 3 2 0 0 0 3 1 0 0 3 0 0 23 2 2487.3068 P11021 P11021 345 367 HSPA5 78 kDa glucose-regulated protein yes yes 3;4 2.0783E-10 215.11 By MS/MS 5.33 0.471 2 1 3 6613200 6613200 0 14791 571 15631 37816;37817;37818 30256;30257 30256 2 62683 0 VLEEALLSR TGGAEGTGDAVLGEKVLEEALLSREHVLEL AVLGEKVLEEALLSREHVLELENSKGPSLA K V L S R E 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1028.5866 Q92667 Q92667 214 222 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.0012025 131.44 By MS/MS 3.5 0.5 1 1 2 1098100 1098100 0 14792 2068 15632 37819;37820 30258 30258 1 41532 0 VLEEANQAINPK FFTPGNLKQARELIKVLEEANQAINPKLMQ LIKVLEEANQAINPKLMQLVDHRGGGGGGG K V L P K L 2 0 2 0 0 1 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1324.6987 Q92841 Q92841 536 547 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.00034884 140.78 By MS/MS 5 0 1 1 1390000 1390000 0 14793 2073 15633 37821 30259 30259 1 13941 0 VLEEDESIR ATTVSSPSAAITVQRVLEEDESIRTCLSED AITVQRVLEEDESIRTCLSEDAKEIQNKIE R V L I R T 0 1 0 1 0 0 3 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1088.535 O43432 O43432 451 459 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.027094 85.862 By MS/MS 2 0 1 1 1019800 1019800 0 14794 210 15634 37822 30260 30260 1 344950 0 VLEEGSVEAR KSHLEVPLEENVNRRVLEEGSVEARTIEDA NVNRRVLEEGSVEARTIEDAIAVLSVAEEA R V L A R T 1 1 0 0 0 0 3 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1087.551 Q96CT7 Q96CT7 136 145 CCDC124 Coiled-coil domain-containing protein 124 yes yes 2 0.00017335 148.94 By MS/MS By MS/MS 8 0 2 1 1 1853900 1803700 50184 14795 2127 15635 37823;37824 30261;30262 30262 1 22772 67721 VLEENQEHYHIVQK LEKVFEELQATDKKRVLEENQEHYHIVQKF RVLEENQEHYHIVQKFLILGDIDGLMDEFS R V L Q K F 0 0 1 0 0 2 3 0 2 1 1 1 0 0 0 0 0 0 1 2 0 0 14 0 1764.8795 P57740 P57740 504 517 NUP107 Nuclear pore complex protein Nup107 yes yes 3 0.035438 71.241 By MS/MS 4 0 1 1 1447900 1447900 0 14796 1082 15636 37825 30263 30263 1 136260 0 VLEEYGAGVCSTR GFARNTGSCQEAAAKVLEEYGAGVCSTRQE AKVLEEYGAGVCSTRQEIGNLDKHEELEEL K V L T R Q 1 1 0 0 1 0 2 2 0 0 1 0 0 0 0 1 1 0 1 2 0 0 13 0 1439.6715 O15270 O15270 195 207 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 1.6471E-06 202.31 By MS/MS By matching 6.33 0.471 2 1 2 1 5878100 5851000 27141 14797 178 15637 37826;37827;37828 30264 30264 1 44405 27812 VLEGMEVVR VKTAWLDGKHVVFGKVLEGMEVVRKVESTK HVVFGKVLEGMEVVRKVESTKTDSRDKPLK K V L V R K 0 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 1030.5481 P23284 P23284 172 180 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0010612 133.23 By MS/MS 9 0 1 1 1812500 1812500 0 14798 702 15638 37829 30265 30265 1 35670 0 VLEGNEQFINAAK YKTRIQVRLGEHNIKVLEGNEQFINAAKII IKVLEGNEQFINAAKIIRHPKYNRDTLDND K V L A K I 2 0 2 0 0 1 2 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1431.7358 P35030 P35030 137 149 PRSS3 Trypsin-3 yes yes 2 4.7745E-14 223.87 By MS/MS By MS/MS 5.33 3.2 2 2 2 1 1 1 1 1 2 2 5 10 4201400 1259800 2941600 14799 811 15639 37830;37831;37832;37833;37834;37835;37836;37837;37838;37839;37840;37841;37842;37843;37844 30266;30267;30268;30269;30270;30271;30272;30273;30274;30275;30276;30277;30278;30279;30280;30281;30282;30283;30284 30276 19 156530 3732700 VLEHQLLQTTK ______________________________ MFSKVLEHQLLQTTKLVEEHLDSEIQKLDQ K V L T K L 0 0 0 0 0 2 1 0 1 0 3 1 0 0 0 0 2 0 0 1 0 0 11 0 1308.7402 O14530 O14530 13 23 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 2 0.00058417 129.88 By MS/MS 8 0 1 1 936470 936470 0 14800 124 15640 37845 30285 30285 1 11823 0 VLEKVDVEQK DQDGDSAISFTEFVKVLEKVDVEQKMSIRF TEFVKVLEKVDVEQKMSIRFLH________ K V L Q K M 0 0 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 0 3 0 0 10 1 1185.6605 Q99653 Q99653 179 188 CHP1 Calcineurin B homologous protein 1 yes yes 2;3 0.00058563 144.65 By MS/MS 7.43 1.4 1 1 1 2 2 7 5557700 5557700 0 14801 2257 15641 37846;37847;37848;37849;37850;37851;37852 30286;30287;30288;30289 30289 4 69277 0 VLELDPALAPVVSR AAVWNAQEAQADFAKVLELDPALAPVVSRE KVLELDPALAPVVSRELQALEARIRQKDEE K V L S R E 2 1 0 1 0 0 1 0 0 0 3 0 0 0 2 1 0 0 0 3 0 0 14 0 1477.8504 O00170 O00170 291 304 AIP AH receptor-interacting protein yes yes 2 0.00087131 127.52 By MS/MS 8.5 1.12 1 1 1 1 4 3086600 3086600 0 14802 87 15642 37853;37854;37855;37856 30290;30291 30290 2 48681 0 VLELEPNNFEATNELR FALQKLEEAKKDYERVLELEPNNFEATNEL LELEPNNFEATNELRKISQALASKENSYPK R V L L R K 1 1 3 0 0 0 4 0 0 0 3 0 0 1 1 0 1 0 0 1 0 0 16 0 1886.9374 Q9H6T3 Q9H6T3 227 242 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.00029279 137.73 By MS/MS 5 0 1 1 2561600 2561600 0 14803 2459 15643 37857 30292 30292 1 25692 0 VLELEPNNFEATNELRK FALQKLEEAKKDYERVLELEPNNFEATNEL ELEPNNFEATNELRKISQALASKENSYPKE R V L R K I 1 1 3 0 0 0 4 0 0 0 3 1 0 1 1 0 1 0 0 1 0 0 17 1 2015.0324 Q9H6T3 Q9H6T3 227 243 RPAP3 RNA polymerase II-associated protein 3 yes yes 2;3 0.001758 141.59 By MS/MS 5.75 0.829 2 1 1 4 8213300 8213300 0 14804 2459 15644 37858;37859;37860;37861 30293;30294 30294 2 80604 0 VLELICTR LNNRTSRDLAEQCVKVLELICTRESGAVFE LAEQCVKVLELICTRESGAVFEAGGLNCVL K V L T R E 0 1 0 0 1 0 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 8 0 1002.5532 Q9ULT8 Q9ULT8 126 133 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.049281 82.75 By MS/MS 2 0.816 1 1 1 3 735720 735720 0 14805 2774 15645 37862;37863;37864 30295 30295 1 146910 0 VLENAEGAR TTNSCVAVMEGKQAKVLENAEGARTTPSVV EGKQAKVLENAEGARTTPSVVAFTADGERL K V L A R T 2 1 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 957.48796 P38646 P38646 77 85 HSPA9 Stress-70 protein, mitochondrial yes yes 2 4.05E-05 173.39 By MS/MS By MS/MS 6.83 1.77 2 1 1 1 1 5 1 73206000 71973000 1233500 14806 850 15646 37865;37866;37867;37868;37869;37870 30296;30297;30298;30299;30300;30301 30297 6 855810 1035900 VLENIELNK LRLHSLLGDYYQAIKVLENIELNKKSMYSR YYQAIKVLENIELNKKSMYSRVPECQVTTY K V L N K K 0 0 2 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 9 0 1070.5972 Q9Y262 Q9Y262 293 301 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 6.1253E-06 166.09 By MS/MS By matching 5.75 0.829 2 1 1 3 1 17365000 17186000 178670 14807 2814 15647 37871;37872;37873;37874 30302;30303;30304 30303 3 178940 150040 VLENIELNKK LRLHSLLGDYYQAIKVLENIELNKKSMYSR YQAIKVLENIELNKKSMYSRVPECQVTTYY K V L K K S 0 0 2 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1198.6921 Q9Y262 Q9Y262 293 302 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 3.4012E-07 196.52 By MS/MS By MS/MS 4.86 2.17 2 1 1 3 4 2 1 11 3 111460000 111240000 223900 14808 2814 15648 37875;37876;37877;37878;37879;37880;37881;37882;37883;37884;37885;37886;37887;37888 30305;30306;30307;30308;30309;30310;30311;30312;30313;30314 30312 10 1426900 212040 VLEQDKAR TQVVQERESLLVKIKVLEQDKARLQRLEDE SLLVKIKVLEQDKARLQRLEDELNRAKSTL K V L A R L 1 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 1 957.52434 P15924 P15924 1821 1828 DSP Desmoplakin yes yes 2;3 0.0088907 145.16 By MS/MS By MS/MS 4 3.33 2 2 2 1 2 4 5 2131600 845120 1286500 14809 628 15649 37889;37890;37891;37892;37893;37894;37895;37896;37897 30315;30316;30317;30318;30319;30320 30320 6 172490 331750 VLEQLEDLDSR SCARLAEMRQKEIPRVLEQLEDLDSRVLYY EIPRVLEQLEDLDSRVLYYSATKNGILYRV R V L S R V 0 1 0 2 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1315.662 P26358 P26358 910 920 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 1.7402E-05 166.29 By MS/MS 3 0.816 1 1 1 3 1564400 1564400 0 14810 730 15650 37898;37899;37900 30321;30322;30323 30322 3 246090 0 VLEQLTGQTPVFSK ICVGESGDRLTRAAKVLEQLTGQTPVFSKA KVLEQLTGQTPVFSKARYTVRSFGIRRNEK K V L S K A 0 0 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 0 14 0 1545.8403 P62913 P62913 39 52 RPL11 60S ribosomal protein L11 yes yes 2 1.6563E-16 252.96 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 22550000 22335000 215190 14811 1186 15651 37901;37902;37903 30324;30325;30326 30325 3 464680 490700 VLEQPVVVQSVGTDGR SALAQARLLYGNDAKVLEQPVVVQSVGTDG LEQPVVVQSVGTDGRVFHFLVFQLNTTDLD K V L G R V 0 1 0 1 0 2 1 2 0 0 1 0 0 0 1 1 1 0 0 5 0 0 16 0 1681.8999 Q9BZE1 Q9BZE1 335 350 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 4.476E-11 247.11 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 8687800 8647000 40792 14812 2376 15652 37904;37905;37906;37907;37908 30327 30327 1 138110 73466 VLESVAR ______________________________ ______________________________ M V L A R I 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 772.4443 Q8N5K1 Q8N5K1 2 8 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 0.012522 128.86 By MS/MS 10 0 1 1 2769300 2769300 0 14813 1923 15653 37909 30328 30328 1 149260 0 VLETEAVDQPDVVQR LKSPAIPEGKETLSKVLETEAVDQPDVVQR VLETEAVDQPDVVQRSHTVPYPDITNFLSV K V L Q R S 1 1 0 2 0 2 2 0 0 0 1 0 0 0 1 0 1 0 0 4 0 0 15 0 1696.8632 Q5TH69 Q5TH69 551 565 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 1.747E-11 265.75 By MS/MS 2 0 1 1 660810 660810 0 14814 1642 15654 37910 30329;30330 30329 2 223510 0 VLETFLAK KATSSHPNSTSLKAKVLETFLAKSRPELLE STSLKAKVLETFLAKSRPELLEYYIKVILD K V L A K S 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 8 0 919.53787 Q14258 Q14258 440 447 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0068584 116.88 By MS/MS 5 0 1 1 1031500 1031500 0 14815 1437 15655 37911 30331 30331 1 10346 0 VLETVGVFEVPK TTRRHLSSRNRPEGKVLETVGVFEVPKQNG EGKVLETVGVFEVPKQNGKYETGQLFLHSI K V L P K Q 0 0 0 0 0 0 2 1 0 0 1 1 0 1 1 0 1 0 0 4 0 0 12 0 1315.7388 Q9Y2S7 Q9Y2S7 61 72 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 9.5025E-09 215.72 By MS/MS 7 0 1 1 1276200 1276200 0 14816 2842 15656 37912 30332 30332 1 20034 0 VLEVFFIPMDPR PFCYLSVPLPISHKRVLEVFFIPMDPRRKP HKRVLEVFFIPMDPRRKPEQHRLVVPKKGK R V L P R R 0 1 0 1 0 0 1 0 0 1 1 0 1 2 2 0 0 0 0 2 0 0 12 0 1461.769 P51784 P51784 495 506 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.028959 79.974 By MS/MS 4 0 1 1 67726 67726 0 14817 1006 15657 37913 30333;30334 30334 554 2 6373.5 0 VLFALSR NNNINSQINMYLLSRVLFALSRLAVEKGYI INMYLLSRVLFALSRLAVEKGYIPEPRWDP R V L S R L 1 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 7 0 804.48577 Q9Y6I8 Q9Y6I8 134 140 PXMP4 Peroxisomal membrane protein 4 yes yes 2 0.039458 97.602 By MS/MS 8.5 0.5 1 1 2 1279500 1279500 0 14818 2944 15658 37914;37915 30335 30335 1 17929 0 VLFDKVASQGEVVR TRNSEPAGLETPEAKVLFDKVASQGEVVRK KVLFDKVASQGEVVRKLKTEKAPKDQVDIA K V L V R K 1 1 0 1 0 1 1 1 0 0 1 1 0 1 0 1 0 0 0 4 0 0 14 1 1545.8515 P07814 P07814 903 916 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 5.0719E-16 259.75 By MS/MS 3.5 0.957 1 2 2 1 6 6856000 6856000 0 14819 512 15659 37916;37917;37918;37919;37920;37921 30336;30337;30338 30337 3 460120 0 VLFDKVASQGEVVRK TRNSEPAGLETPEAKVLFDKVASQGEVVRK VLFDKVASQGEVVRKLKTEKAPKDQVDIAV K V L R K L 1 1 0 1 0 1 1 1 0 0 1 2 0 1 0 1 0 0 0 4 0 0 15 2 1673.9465 P07814 P07814 903 917 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.023869 78.505 By MS/MS 4 0 1 1 1080400 1080400 0 14820 512 15660 37922 30339 30339 1 101670 0 VLFFGTDQFAR EDCRDSRVREKPPWRVLFFGTDQFAREALR PPWRVLFFGTDQFAREALRALHAARENKEE R V L A R E 1 1 0 1 0 1 0 1 0 0 1 0 0 3 0 0 1 0 0 1 0 0 11 0 1299.6612 Q96DP5 Q96DP5 50 60 MTFMT Methionyl-tRNA formyltransferase, mitochondrial yes yes 2 1.651E-05 167.12 By MS/MS 7.5 0.5 1 1 2 253760 253760 0 14821 2136 15661 37923;37924 30340 30340 1 3902.2 0 VLFGEITR KLLNIRPPPRAQWIRVLFGEITRLLNHIMA PRAQWIRVLFGEITRLLNHIMAVTTHALDL R V L T R L 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 8 0 933.52837 O75306 O75306 172 179 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.050519 82.279 By MS/MS 8 0.816 1 1 1 3 5132700 5132700 0 14822 308 15662 37925;37926;37927 30341 30341 1 79821 0 VLFLIPK LAKGEPPNSDLHPMRVLFLIPKNSPPTLEG NSDLHPMRVLFLIPKNSPPTLEGQHSKPFK R V L P K N 0 0 0 0 0 0 0 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 7 0 828.54731 O00506;Q9P289;Q9Y6E0 O00506 223 229 STK25;STK26;STK24 Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 2 0.04831 90.939 By MS/MS 6 0 1 1 527790 527790 0 14823 112;2680 15663 37928 30342 30342 1 3628.2 0 VLFLLGADGGCITR GYKPGVEAIRKNPPKVLFLLGADGGCITRQ KVLFLLGADGGCITRQDLPKDCFIIYQGHH K V L T R Q 1 1 0 1 1 0 0 3 0 1 3 0 0 1 0 0 1 0 0 1 0 0 14 0 1490.7915 P28331 P28331 544 557 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.00047153 152.67 By MS/MS 5 0 1 1 173420 173420 0 14824 753 15664 37929 30343 30343 1 1739.3 0 VLFLSTVR VNVERVLNVQGKQFRVLFLSTVRTRHTCKH VQGKQFRVLFLSTVRTRHTCKHKQTPIKKK R V L V R T 0 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 1 0 0 2 0 0 8 0 933.56475 P42694 P42694 990 997 HELZ Probable helicase with zinc finger domain yes yes 2 0.0049312 125.81 By MS/MS 2 0 1 1 231550 231550 0 14825 884 15665 37930 30344 30344 1 78318 0 VLFRPSDTANSSNQDALSSNTSLK LRNHPSFYVFNHRGRVLFRPSDTANSSNQD NSSNQDALSSNTSLKLRKLESLRR______ R V L L K L 2 1 3 2 0 1 0 0 0 0 3 1 0 1 1 6 2 0 0 1 0 0 24 1 2551.2514 Q8N4V1 Q8N4V1 99 122 MMGT1 Membrane magnesium transporter 1 yes yes 3 1.5333E-07 120.33 By MS/MS 10 0 1 1 2901100 2901100 0 14826 1919 15666 37931 30345 30345 1 156360 0 VLFTEQPETYYK ISKLAPKDYVHCLHKVLFTEQPETYYKWDN LHKVLFTEQPETYYKWDNWPPESDRNFFLR K V L Y K W 0 0 0 0 0 1 2 0 0 0 1 1 0 1 1 0 2 0 2 1 0 0 12 0 1516.745 Q8N201 Q8N201 615 626 INTS1 Integrator complex subunit 1 yes yes 2 0.0064457 99.343 By MS/MS 2 0 1 1 181360 181360 0 14827 1907 15667 37932 30346 30346 1 61344 0 VLGALLFVK DALVAREKGARRETKVLGALLFVKGAVWKA ARRETKVLGALLFVKGAVWKALFGKEADKL K V L V K G 1 0 0 0 0 0 0 1 0 0 3 1 0 1 0 0 0 0 0 2 0 0 9 0 958.62154 Q8IUR0 Q8IUR0 82 90 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.0066003 106.42 By MS/MS 8.5 0.5 1 1 2 318750 318750 0 14828 1859 15668 37933;37934 30347;30348 30347 2 5642.4 0 VLGATLLPDLIQK HKQADMQEEKNRIERVLGATLLPDLIQKVL ERVLGATLLPDLIQKVLTFALSEEVRPQDT R V L Q K V 1 0 0 1 0 1 0 1 0 1 4 1 0 0 1 0 1 0 0 1 0 0 13 0 1379.8388 P55786 P55786 782 794 NPEPPS Puromycin-sensitive aminopeptidase yes yes 2 0.00018306 164.64 By MS/MS 4 0 1 1 90268 90268 0 14829 1062 15669 37935 30349 30349 1 8494.9 0 VLGDLIFNQPDR FGTEVLLENGDINRKVLGDLIFNQPDRRQL NRKVLGDLIFNQPDRRQLLNAITHPEIRKE K V L D R R 0 1 1 2 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 12 0 1385.7303 Q8WVC6 Q8WVC6 68 79 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 1.5056E-08 209.8 By MS/MS 9 0 1 1 1774200 1774200 0 14830 2024 15670 37936 30350 30350 1 34916 0 VLGDLIFNQPDRR FGTEVLLENGDINRKVLGDLIFNQPDRRQL RKVLGDLIFNQPDRRQLLNAITHPEIRKEM K V L R R Q 0 2 1 2 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 13 1 1541.8314 Q8WVC6 Q8WVC6 68 80 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.029202 93.096 By MS/MS 9 0 1 1 1721000 1721000 0 14831 2024 15671 37937 30351 30351 1 33870 0 VLGEAMTGISQNAK MSYFGCLDSVMENSKVLGEAMTGISQNAKN KVLGEAMTGISQNAKNGNLPEFGDAISTAS K V L A K N 2 0 1 0 0 1 1 2 0 1 1 1 1 0 0 1 1 0 0 1 0 0 14 0 1417.7235 Q9Y490 Q9Y490 1402 1415 TLN1 Talin-1 yes yes 2 8.1159E-17 262.07 By MS/MS 2.33 0.471 2 1 3 2200400 2200400 0 14832 2888 15672;15673 37938;37939;37940 30352;30353 30353 1203 2 692570 0 VLGGSFADQK DEALKALGHPAMLSKVLGGSFADQKICQGC AMLSKVLGGSFADQKICQGCPHRYECEESF K V L Q K I 1 0 0 1 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1020.524 Q93008;O00507 Q93008 1713 1722 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 4.0774E-05 157.96 By MS/MS 2.5 1.12 1 1 1 1 4 4696300 4696300 0 14833 2085 15674 37941;37942;37943;37944 30354;30355;30356 30355 3 1139700 0 VLGIAFSSAR EDDDFMDENQGKGIRVLGIAFSSARDHPVF GKGIRVLGIAFSSARDHPVFCALVNGEGEV R V L A R D 2 1 0 0 0 0 0 1 0 1 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1019.5764 Q7KZ85 Q7KZ85 781 790 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.0021026 112.11 By MS/MS 2 0 1 1 98316 98316 0 14834 1754 15675 37945 30357 30357 1 33255 0 VLGIQVDTDGSGR GRDRVGVGIRSSYIRVLGIQVDTDGSGRSF IRVLGIQVDTDGSGRSFAGAVSPQEEEEFR R V L G R S 0 1 0 2 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1315.6732 P33992 P33992 296 308 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00021837 160.86 By MS/MS 2.5 1.5 1 1 2 5347000 5347000 0 14835 807 15676 37946;37947 30358;30359;30360 30359 3 521600 0 VLGLLER QLDAISEKVDVIAKRVLGLLERSSMSLTQD KVDVIAKRVLGLLERSSMSLTQDMLNGELK R V L E R S 0 1 0 0 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 798.49634 Q5JPH6 Q5JPH6 449 455 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.02911 105.39 By MS/MS 6 0 1 1 3506500 3506500 0 14836 1605 15677 37948 30361 30361 1 24104 0 VLGLVLLR IKPKNAKQPEREEKRVLGLVLLRGENLVSM PEREEKRVLGLVLLRGENLVSMTVEGPPPK R V L L R G 0 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 2 0 0 8 0 881.60622 P63162;P14678 P63162 66 73 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B yes no 2 0.00033832 163.34 By MS/MS 8 0 1 1 591780 591780 0 14837 617 15678 37949 30362 30362 1 7471.2 0 VLGTAFDPFLGGK AFQVSACAFNKGKLKVLGTAFDPFLGGKNF LKVLGTAFDPFLGGKNFDEKLVEHFCAEFK K V L G K N 1 0 0 1 0 0 0 3 0 0 2 1 0 2 1 0 1 0 0 1 0 0 13 0 1320.7078 Q92598 Q92598 222 234 HSPH1 Heat shock protein 105 kDa yes yes 2 0.00034852 147.3 By MS/MS 4 0 1 1 736110 736110 0 14838 2059 15679 37950 30363 30363 1 69273 0 VLGTPVETIELTEDR VELTKAGVLARYGVRVLGTPVETIELTEDR VLGTPVETIELTEDRRAFAARMAEIGEHVA R V L D R R 0 1 0 1 0 0 3 1 0 1 2 0 0 0 1 0 3 0 0 2 0 0 15 0 1670.8727 P27708 P27708 501 515 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.7183E-07 219.92 By MS/MS 1.5 0.5 1 1 2 724070 724070 0 14839 745 15680 37951;37952 30364;30365 30365 2 220580 0 VLGTPVETIELTEDRR VELTKAGVLARYGVRVLGTPVETIELTEDR LGTPVETIELTEDRRAFAARMAEIGEHVAP R V L R R A 0 2 0 1 0 0 3 1 0 1 2 0 0 0 1 0 3 0 0 2 0 0 16 1 1826.9738 P27708 P27708 501 516 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0018024 169.58 By MS/MS 1.5 0.5 1 1 2 307470 307470 0 14840 745 15681 37953;37954 30366 30366 1 95253 0 VLGTSPEAIDSAENR LPNNMAMALHRQQCRVLGTSPEAIDSAENR VLGTSPEAIDSAENRFKFSRLLDTIGISQP R V L N R F 2 1 1 1 0 0 2 1 0 1 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1557.7635 P27708 P27708 1034 1048 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 6.5251E-11 232.17 By MS/MS 2 0.816 1 1 1 3 4885800 4885800 0 14841 745 15682 37955;37956;37957 30367;30368;30369;30370 30368 4 1230800 0 VLGVLEVSR RMRIQKAGGNVRDGRVLGVLEVSRSIGDGQ NVRDGRVLGVLEVSRSIGDGQYKRCGVTSV R V L S R S 0 1 0 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 3 0 0 9 0 970.58113 Q9H0C8 Q9H0C8 283 291 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 2 0.0092734 101.72 By MS/MS 7 0 1 1 616390 616390 0 14842 2406 15683 37958 30371 30371 1 9676.2 0 VLGVPIIVQASQAEK DVSSVPLAIGLTGQRVLGVPIIVQASQAEK VLGVPIIVQASQAEKNRAAAMANNLQKGSA R V L E K N 2 0 0 0 0 2 1 1 0 2 1 1 0 0 1 1 0 0 0 3 0 0 15 0 1550.9032 Q14498 Q14498 218 232 RBM39 RNA-binding protein 39 yes yes 2 0.00034835 136.27 By MS/MS 4.17 2.11 1 1 1 1 1 1 6 3940300 3940300 0 14843 1441 15684 37959;37960;37961;37962;37963;37964 30372;30373;30374;30375;30376 30376 5 112630 0 VLGYIQLGQK DTQQGPQVDKEQFERVLGYIQLGQKEGAKL EQFERVLGYIQLGQKEGAKLLCGGERFGER R V L Q K E 0 0 0 0 0 2 0 2 0 1 2 1 0 0 0 0 0 0 1 1 0 0 10 0 1117.6495 P30837 P30837 370 379 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.0013564 116.73 By MS/MS 6.5 0.5 1 1 2 4170300 4170300 0 14844 780 15685 37965;37966 30377 30377 1 30187 0 VLHAAASAGEHEK GDAGSLTSASQRFYRVLHAAASAGEHEKVV YRVLHAAASAGEHEKVVQGLFDNFLRLRLR R V L E K V 4 0 0 0 0 0 2 1 2 0 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1318.663 Q8WVB6 Q8WVB6 635 647 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 3 0.037358 71.558 By MS/MS 3 0 1 1 186880 186880 0 14845 2022 15686 37967 30378 30378 1 3419.4 0 VLHDAQQQCR RGLLLSRENEDQVVKVLHDAQQQCRDGHPV DQVVKVLHDAQQQCRDGHPVVVNILIGRTD K V L C R D 1 1 0 1 1 3 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1253.5935 A1L0T0 A1L0T0 600 609 ILVBL Acetolactate synthase-like protein yes yes 2;3 0.0010745 137.05 By MS/MS 5.5 0.5 2 2 4 951020 951020 0 14846 9 15687 37968;37969;37970;37971 30379;30380;30381;30382 30382 4 8297.2 0 VLHPEQHR STTVTNPEPMGKQGRVLHPEQHRVVSVREC PMGKQGRVLHPEQHRVVSVRECARSQGFPD R V L H R V 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1014.5359 P26358 P26358 1539 1546 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.036918 85.064 By MS/MS 1.5 0.5 1 1 2 115750 115750 0 14847 730 15688 37972;37973 30383 30383 1 37838 0 VLHVSENPVPLTVR GEEQDVGDAGRLLLRVLHVSENPVPLTVRV RVLHVSENPVPLTVRVSPEVRDVRPYIVGA R V L V R V 0 1 1 0 0 0 1 0 1 0 2 0 0 0 2 1 1 0 0 4 0 0 14 0 1558.8831 Q8N1G4 Q8N1G4 311 324 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 0.00043616 158.56 By MS/MS 5 0 1 1 1308600 1308600 0 14848 1906 15689 37974 30384 30384 1 13124 0 VLIALLAR PEERWSPESPLQAPRVLIALLARNAAHALP SPLQAPRVLIALLARNAAHALPTTLGALER R V L A R N 2 1 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 8 0 867.59057 Q8NBJ5 Q8NBJ5 54 61 COLGALT1 Procollagen galactosyltransferase 1 yes yes 2 0.0066826 117.7 By MS/MS 5 0 1 1 131540 131540 0 14849 1939 15690 37975 30385 30385 1 1319.3 0 VLIEGSINSVR LLLQPVTISRNEKEKVLIEGSINSVRVSIA EKEKVLIEGSINSVRVSIAVKQADEIEKIL K V L V R V 0 1 1 0 0 0 1 1 0 2 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1185.6717 P59998 P59998 61 71 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.00020264 148.56 By MS/MS 9.5 0.5 1 1 2 2213900 2213900 0 14850 1088 15691 37976;37977 30386;30387 30387 2 60031 0 VLIFSQMTK LLQKMLKNLKEGGHRVLIFSQMTKMLDLLE KEGGHRVLIFSQMTKMLDLLEDFLEHEGYK R V L T K M 0 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 9 0 1065.5893 Q14839;Q8TDI0;Q12873 Q14839 1069 1077 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0016116 126.24 By MS/MS 2 0 2 2 427820 427820 0 14851 1459 15692;15693 37978;37979 30388;30389 30388 856 2 144710 0 VLIFSQMTR VLDKLLPKLKEQGSRVLIFSQMTRVLDILE KEQGSRVLIFSQMTRVLDILEDYCMWRNYE R V L T R V 0 1 0 0 0 1 0 0 0 1 1 0 1 1 0 1 1 0 0 1 0 0 9 0 1093.5954 O60264;P28370 O60264 502 510 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.0026052 113.62 By MS/MS 3.5 0.5 1 1 2 222700 222700 0 14852 251;755 15694 37980;37981 30390 30390 1 10804 0 VLIGNVQPGILR VPTADELFDFHIGDRVLIGNVQPGILRFKG GDRVLIGNVQPGILRFKGETSFAKGFWAGV R V L L R F 0 1 1 0 0 1 0 2 0 2 2 0 0 0 1 0 0 0 0 2 0 0 12 0 1277.782 Q5VT06 Q5VT06 2503 2514 CEP350 Centrosome-associated protein 350 yes yes 2 0.00082706 128.38 By MS/MS 1 0 1 1 46009 46009 0 14853 1647 15695 37982 30391;30392 30391 2 11087 0 VLIIGGGDGGVLR MIANLPLCSHPNPRKVLIIGGGDGGVLREV RKVLIIGGGDGGVLREVVKHPSVESVVQCE K V L L R E 0 1 0 1 0 0 0 5 0 2 2 0 0 0 0 0 0 0 0 2 0 0 13 0 1224.719 P19623 P19623 97 109 SRM Spermidine synthase yes yes 2 0.0011668 123.11 By MS/MS 8.5 0.5 1 1 2 1099800 1099800 0 14854 664 15696 37983;37984 30393 30393 1 14700 0 VLIPIHEANR FSMAGMYEAVNEVYKVLIPIHEANRDAKKL NEVYKVLIPIHEANRDAKKLSTIHGKLQEA K V L N R D 1 1 1 0 0 0 1 0 1 2 1 0 0 0 1 0 0 0 0 1 0 0 10 0 1160.6666 Q96N67 Q96N67 1800 1809 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.050012 72.325 By MS/MS 2 0 1 1 853580 853580 0 14855 2201 15697 37985 30394 30394 1 288720 0 VLISDSLDPCCR ______________________________ LRKVLISDSLDPCCRKILQDGGLQVVEKQN K V L C R K 0 1 0 2 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1433.6643 O43175 O43175 9 20 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.1303E-08 213.8 By MS/MS By matching 7.75 1.79 2 1 1 3 1 7689700 7630000 59624 14856 195 15698 37986;37987;37988;37989 30395;30396 30395 2 65380 61098 VLISTDLTSR QRLDAMAKLKHFHCRVLISTDLTSRGIDAE HFHCRVLISTDLTSRGIDAEKVNLVVNLDV R V L S R G 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 2 2 0 0 1 0 0 10 0 1103.6186 Q9UHI6 Q9UHI6 362 371 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 2 0.01001 94.309 By MS/MS 4 0 1 1 1376500 1376500 0 14857 2731 15699 37990 30397 30397 1 129540 0 VLISTDVWAR ERESIMKEFRSGASRVLISTDVWARGLDVP SGASRVLISTDVWARGLDVPQVSLIINYDL R V L A R G 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 2 0 0 10 0 1158.6397 P38919 P38919 330 339 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 2 0.04205 76.17 By MS/MS 6 0 1 1 1044400 1044400 0 14858 851 15700 37991 30398 30398 1 7179.7 0 VLITTDLLAR ERDVIMREFRSGSSRVLITTDLLARGIDVQ SGSSRVLITTDLLARGIDVQQVSLVINYDL R V L A R G 1 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 2 0 0 1 0 0 10 0 1113.6758 P60842;Q14240 P60842 325 334 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 2.2471E-17 239.66 By MS/MS By MS/MS 5.96 2.26 3 2 3 2 3 18 6 5 3 3 42 6 272490000 271350000 1139800 14859 1097 15701 37992;37993;37994;37995;37996;37997;37998;37999;38000;38001;38002;38003;38004;38005;38006;38007;38008;38009;38010;38011;38012;38013;38014;38015;38016;38017;38018;38019;38020;38021;38022;38023;38024;38025;38026;38027;38028;38029;38030;38031;38032;38033;38034;38035;38036;38037;38038;38039 30399;30400;30401;30402;30403;30404;30405;30406;30407;30408;30409;30410;30411;30412;30413;30414;30415;30416;30417;30418;30419;30420;30421;30422;30423;30424;30425;30426;30427;30428;30429;30430;30431;30432;30433;30434;30435;30436;30437;30438;30439;30440;30441;30442;30443;30444;30445;30446;30447;30448;30449;30450;30451;30452;30453;30454;30455;30456;30457;30458;30459;30460;30461;30462;30463;30464;30465;30466 30442 66 15596000 1195800 VLIVSEDPELPYMRPPLSK FAAARSIRARDPGARVLIVSEDPELPYMRP SEDPELPYMRPPLSKELWFSDDPNVTKTLR R V L S K E 0 1 0 1 0 0 2 0 0 1 3 1 1 0 4 2 0 0 1 2 0 0 19 1 2182.1708 O95831 O95831 159 177 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 0.00078349 141.37 By MS/MS 5.67 0.745 3 2 1 6 12178000 12178000 0 14860 429 15702;15703 38040;38041;38042;38043;38044;38045 30467;30468;30469;30470 30468 163 4 117680 0 VLKAQAQSQK IKRAFLIEEQKIVVKVLKAQAQSQKAK___ KIVVKVLKAQAQSQKAK_____________ K V L Q K A 2 0 0 0 0 3 0 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1099.635 P49207 P49207 106 115 RPL34 60S ribosomal protein L34 yes yes 2;3 5.3582E-07 191.45 By MS/MS 9.5 0.5 2 2 4 1836700 1836700 0 14861 945 15704 38046;38047;38048;38049 30471;30472;30473 30471 3 80387 0 VLKDEIDVK RGMGGLFSVGETTAKVLKDEIDVKFKDVAG GETTAKVLKDEIDVKFKDVAGCEEAKLEIM K V L V K F 0 0 0 2 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 2 0 0 9 1 1057.6019 Q9Y4W6 Q9Y4W6 298 306 AFG3L2 AFG3-like protein 2 yes yes 3 0.0011833 122.96 By MS/MS 5 0 1 1 888660 888660 0 14862 2902 15705 38050 30474 30474 1 8912.8 0 VLKQVHPDTGISSK RKRSRKESYSVYVYKVLKQVHPDTGISSKA KVLKQVHPDTGISSKAMGIMNSFVNDIFER K V L S K A 0 0 0 1 0 1 0 1 1 1 1 2 0 0 1 2 1 0 0 2 0 0 14 1 1507.8358 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q96A08 Q99880 45 58 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B type 1-A yes no 3 0.0047629 96.866 By MS/MS 10 0 1 1 474610 474610 0 14863 279 15706 38051 30475 30475 1 25580 0 VLLAAAVCTK ______________________________ ______________________________ M V L T K A 3 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 10 0 1044.6002 P48444 P48444 2 11 ARCN1 Coatomer subunit delta yes yes 2 0.00063127 130.75 By MS/MS By matching 6.33 0.471 2 1 2 1 4771000 4735800 35172 14864 934 15707 38052;38053;38054 30476 30476 1 34431 36042 VLLATLSIPITPER RKNLTQDEMQRMSTRVLLATLSIPITPERT RVLLATLSIPITPERTDIARLLDMDGIIVE R V L E R T 1 1 0 0 0 0 1 0 0 2 3 0 0 0 2 1 2 0 0 1 0 0 14 0 1521.913 Q14152 Q14152 322 335 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00056465 160.18 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 2006700 2006700 0 14865 1422 15708 38055;38056;38057;38058;38059;38060 30477;30478;30479;30480;30481;30482;30483 30481 7 133180 0 VLLDFLMEEK AYVEQIEKAFNYASKVLLDFLMEEKELVAH NYASKVLLDFLMEEKELVAHLRSIKRYFLM K V L E K E 0 0 0 1 0 0 2 0 0 0 3 1 1 1 0 0 0 0 0 1 0 0 10 0 1235.6472 Q9BSJ2 Q9BSJ2 498 507 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.010995 91.265 By MS/MS 4.5 0.5 1 1 2 114520 114520 0 14866 2307 15709 38061;38062 30484 30484 1068 1 8374.3 0 VLLDLSAFLK NGVALRPWDGNSDDRVLLDLSAFLKTIALN NSDDRVLLDLSAFLKTIALNGVEDVRTVLE R V L L K T 1 0 0 1 0 0 0 0 0 0 4 1 0 1 0 1 0 0 0 1 0 0 10 0 1117.6747 Q3ZCQ8 Q3ZCQ8 275 284 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.037566 78.334 By MS/MS 7 0 1 1 32344 32344 0 14867 1580 15710 38063 30485 30485 1 507.74 0 VLLDNVENK TLDSFMQHDVQELCRVLLDNVENKMKGTCV VQELCRVLLDNVENKMKGTCVEGTIPKLFR R V L N K M 0 0 2 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 1042.5659 Q93009 Q93009 302 310 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.045492 94.85 By MS/MS 3 0 1 1 729780 729780 0 14868 2086 15711 38064 30486 30486 0 13353 0 VLLEEGEAQR GPNSKLNLVVKPLEKVLLEEGEAQRLADSP KPLEKVLLEEGEAQRLADSPPPQVWQLISK K V L Q R L 1 1 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1142.5932 P11441 P11441 77 86 UBL4A Ubiquitin-like protein 4A yes yes 2 0.00020511 146.79 By MS/MS 9.5 0.5 1 1 2 996110 996110 0 14869 579 15712 38065;38066 30487 30487 1 38065 0 VLLESEQFLTELTR ______________________________ MVLLESEQFLTELTRLFQKCRTSGSVYITL M V L T R L 0 1 0 0 0 1 3 0 0 0 4 0 0 1 0 1 2 0 0 1 0 0 14 0 1676.8985 P37108 P37108 2 15 SRP14 Signal recognition particle 14 kDa protein yes yes 2 1.4408E-16 269.04 By MS/MS 10 0 1 1 420720 420720 0 14870 844 15713 38067 30488 30488 1 22675 0 VLLGETGKEK RAYQKQPTIFQNKKRVLLGETGKEKLPRYY QNKKRVLLGETGKEKLPRYYKNIGLGFKTP R V L E K L 0 0 0 0 0 0 2 2 0 0 2 2 0 0 0 0 1 0 0 1 0 0 10 1 1072.6128 P62280 P62280 23 32 RPS11 40S ribosomal protein S11 yes yes 2 0.00013688 162.88 By MS/MS By matching 9.33 0.471 2 1 2 1 24972000 24909000 62895 14871 1152 15714 38068;38069;38070 30489 30489 1 511670 143420 VLLGETGKEKLPR RAYQKQPTIFQNKKRVLLGETGKEKLPRYY KRVLLGETGKEKLPRYYKNIGLGFKTPKEA R V L P R Y 0 1 0 0 0 0 2 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 13 2 1438.8508 P62280 P62280 23 35 RPS11 40S ribosomal protein S11 yes yes 2;3;4 0.00021712 163.9 By MS/MS By matching 9.2 0.4 4 1 4 1 15019000 14985000 34524 14872 1152 15715 38071;38072;38073;38074;38075 30490;30491;30492;30493 30493 4 308270 78725 VLLGFSSDESDVEASPR GGPGGASAAPAAGSKVLLGFSSDESDVEAS LGFSSDESDVEASPRDQAGGGGRKDRASLQ K V L P R D 1 1 0 2 0 0 2 1 0 0 2 0 0 1 1 4 0 0 0 2 0 0 17 0 1806.8636 Q9Y2U8 Q9Y2U8 135 151 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.016073 104.41 By MS/MS 4 0 1 1 1242300 1242300 0 14873 2844 15716 38076 30494 30494 0 116910 0 VLLIESLATMEPDSRPELQEK LEESKQWECLTSECRVLLIESLATMEPDSR LATMEPDSRPELQEKAALLKKTLENLE___ R V L E K A 1 1 0 1 0 1 4 0 0 1 4 1 1 0 2 2 1 0 0 1 0 0 21 1 2397.2461 Q5VYK3 Q5VYK3 1813 1833 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 0.0030716 87.088 By MS/MS 2 0 1 1 128740 128740 0 14874 1656 15717 38077 30495;30496;30497 30496 902 3 43547 0 VLLLIDDEYK LQSLLLPVMDQDYAKVLLLIDDEYKVTAFP QDYAKVLLLIDDEYKVTAFPATRNVLRQLH K V L Y K V 0 0 0 2 0 0 1 0 0 1 3 1 0 0 0 0 0 0 1 1 0 0 10 0 1219.67 Q8N766 Q8N766 639 648 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.032219 88.177 By MS/MS 2 0.816 1 1 1 3 236070 236070 0 14875 1931 15718 38078;38079;38080 30498;30499 30498 2 54772 0 VLLNIGQQMLR ______________________________ MGCKVLLNIGQQMLRRKVVDCSREETRLSR K V L L R R 0 1 1 0 0 2 0 1 0 1 3 0 1 0 0 0 0 0 0 1 0 0 11 0 1283.7384 P30825 P30825 5 15 SLC7A1 High affinity cationic amino acid transporter 1 yes yes 2 2.2302E-07 180.87 By MS/MS 2.5 1.12 1 1 1 1 4 444560 444560 0 14876 779 15719 38081;38082;38083;38084 30500;30501 30500 385 2 92026 0 VLLPVLLNK LGTDAEGQKVKDSMRVLLPVLLNKNHDNCD VKDSMRVLLPVLLNKNHDNCDKIRAILLYI R V L N K N 0 0 1 0 0 0 0 0 0 0 4 1 0 0 1 0 0 0 0 2 0 0 9 0 1007.6743 O00186 O00186 389 397 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.015356 91.041 By MS/MS 5.5 0.5 1 1 2 334410 334410 0 14877 89 15720 38085;38086 30502 30502 1 2923.5 0 VLLQAFDVVER LGQLNAEHAEADVRRVLLQAFDVVERSFLE DVRRVLLQAFDVVERSFLESIDDALAEKAS R V L E R S 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 3 0 0 11 0 1287.7187 Q15750 Q15750 105 115 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 2.3903E-05 150.04 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 4819700 4780700 38989 14878 1528 15721 38087;38088;38089;38090;38091 30503;30504;30505 30504 3 33741 39953 VLLQASQDENFGNTTPR AEVTRTARKQSAQKRVLLQASQDENFGNTT LQASQDENFGNTTPRNQVIPRTPSSFRQPF R V L P R N 1 1 2 1 0 2 1 1 0 0 2 0 0 1 1 1 2 0 0 1 0 0 17 0 1888.9279 P57740 P57740 32 48 NUP107 Nuclear pore complex protein Nup107 yes yes 2 3.5604E-33 293.8 By MS/MS 4 0 1 1 2574600 2574600 0 14879 1082 15722 38092 30506 30506 1 242290 0 VLLQEEGTR EKAIKEKEYEIERLRVLLQEEGTRKREYEN EIERLRVLLQEEGTRKREYENELAKVRNHY R V L T R K 0 1 0 0 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1043.5611 P15924 P15924 1176 1184 DSP Desmoplakin yes yes 2 0.009247 120.31 By MS/MS 3 0 1 1 0 0 0 14880 628 15723 38093 30507 30507 1 0 0 VLLQSKDQITAGNAAR GKTKEVYELLDSPGKVLLQSKDQITAGNAA LLQSKDQITAGNAARKNHLEGKAAISNKIT K V L A R K 3 1 1 1 0 2 0 1 0 1 2 1 0 0 0 1 1 0 0 1 0 0 16 1 1683.9268 P22234 P22234 31 46 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2;3 3.4328E-06 194.59 By MS/MS 7 0 2 2 2478700 2478700 0 14881 689 15724 38094;38095 30508;30509 30509 2 38912 0 VLLSALER LLSEEVELYGETKAKVLLSALERLKHRPDG YGETKAKVLLSALERLKHRPDGKYVVVTGI K V L E R L 1 1 0 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 8 0 899.54402 P11586 P11586 355 362 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0023228 140.09 By MS/MS 4.4 1.02 1 2 1 1 5 12779000 12779000 0 14882 582 15725 38096;38097;38098;38099;38100 30510;30511;30512 30510 3 1044100 0 VLLSPDYLPAMR LQSFVQCQPFERLFKVLLSPDYLPAMRRRR LFKVLLSPDYLPAMRRRRSSDPLGDTASNL K V L M R R 1 1 0 1 0 0 0 0 0 0 3 0 1 0 2 1 0 0 1 1 0 0 12 0 1373.7377 Q7Z6Z7 Q7Z6Z7 633 644 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0068263 97.565 By MS/MS 1.5 0.5 1 1 2 351870 351870 0 14883 1802 15726 38101;38102 30513 30513 942 1 100790 0 VLLTMIAR ______________________________ ______________________________ M V L A R V 1 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 1 0 0 1 0 0 8 0 915.55756 O75396 O75396 2 9 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.00017282 172.03 By MS/MS 8.5 0.5 2 2 4 5643900 5643900 0 14884 323 15727;15728 38103;38104;38105;38106 30514;30515;30516;30517 30516 137 4 94311 0 VLLTTQGVDMISK TQTPSWLGLPNNAERVLLTTQGVDMISKML ERVLLTTQGVDMISKMLKMQMLEDEDDLAY R V L S K M 0 0 0 1 0 1 0 1 0 1 2 1 1 0 0 1 2 0 0 2 0 0 13 0 1403.7694 Q14204 Q14204 4330 4342 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 4.6642E-08 219.92 By MS/MS By matching 2 1.07 3 2 1 1 6 1 5691900 5635000 56891 14885 1433 15729;15730 38107;38108;38109;38110;38111;38112;38113 30518;30519;30520;30521 30521 842 4 1391900 56891 VLNDSLTPEIEADR AEQTLKQAASTDSLRVLNDSLTPEIEADRS RVLNDSLTPEIEADRSGGRTDAERTIQDGR R V L D R S 1 1 1 2 0 0 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1570.7839 Q9UI36 Q9UI36 721 734 DACH1 Dachshund homolog 1 yes yes 2 0.00021588 173.19 By MS/MS 4.5 0.5 1 1 2 1350800 1350800 0 14886 2738 15731 38114;38115 30522 30522 1 85516 0 VLNNMEIGTSLFDEEGAK NEMIIGGGMAFTFLKVLNNMEIGTSLFDEE NMEIGTSLFDEEGAKIVKDLMSKAEKNGVK K V L A K I 1 0 2 1 0 0 3 2 0 1 2 1 1 1 0 1 1 0 0 1 0 0 18 0 1965.9354 P00558 P00558 247 264 PGK1 Phosphoglycerate kinase 1 yes yes 2 3.0356E-11 236.05 By MS/MS 7 0 1 1 626890 626890 0 14887 447 15732 38116 30523 30523 170 1 9841 0 VLNSLTQQEK LLTVIDSTEAHCQAKVLNSLTQQEKKETAR HCQAKVLNSLTQQEKKETARPSCEIVDGTR K V L E K K 0 0 1 0 0 2 1 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 Q92538 Q92538 596 605 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 1.7179E-05 169.76 By MS/MS 2.5 0.5 1 1 2 1301800 1301800 0 14888 2050 15733 38117;38118 30524 30524 1 358600 0 VLNSLTQQEKK LLTVIDSTEAHCQAKVLNSLTQQEKKETAR CQAKVLNSLTQQEKKETARPSCEIVDGTRE K V L K K E 0 0 1 0 0 2 1 0 0 0 2 2 0 0 0 1 1 0 0 1 0 0 11 1 1286.7194 Q92538 Q92538 596 606 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.010689 99.013 By MS/MS 2 0 1 1 178880 178880 0 14889 2050 15734 38119 30525 30525 0 60505 0 VLNSTVELAR TKDGTVQLGDFGIARVLNSTVELARTCIGT FGIARVLNSTVELARTCIGTPYYLSPEICE R V L A R T 1 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 10 0 1100.619 Q96PY6 Q96PY6 152 161 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.00027682 141.91 By MS/MS 3 0 1 1 802130 802130 0 14890 2211 15735 38120 30526 30526 1 14677 0 VLNTNIDGR ______________________________ FQHILRVLNTNIDGRRKIAFAITAIKGVGR R V L G R R 0 1 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5302 P62269 P62269 15 23 RPS18 40S ribosomal protein S18 yes yes 2 5.5805E-05 170.5 By MS/MS By matching 9.4 0.49 3 2 4 1 97556000 97065000 490330 14891 1149 15736 38121;38122;38123;38124;38125 30527;30528;30529;30530;30531;30532 30527 6 2441200 1118100 VLNTNIDGRR ______________________________ QHILRVLNTNIDGRRKIAFAITAIKGVGRR R V L R R K 0 2 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 1 1156.6313 P62269 P62269 15 24 RPS18 40S ribosomal protein S18 yes yes 2 0.039172 91.069 By MS/MS 9.5 0.5 1 1 2 10714000 10714000 0 14892 1149 15737 38126;38127 30533 30533 1 249630 0 VLPSITTEILK LPRIFTSIGEDYDERVLPSITTEILKSVVA YDERVLPSITTEILKSVVARFDAGELITQR R V L L K S 0 0 0 0 0 0 1 0 0 2 2 1 0 0 1 1 2 0 0 1 0 0 11 0 1212.7329 P35232 P35232 118 128 PHB Prohibitin yes yes 2 0.044327 72.928 By MS/MS By matching 9 0.816 1 1 1 2 1 1032400 887890 144560 14893 814 15738 38128;38129;38130 30534 30534 1 31945 195070 VLPSIVNEVLK LPSMYQRLGLDYEERVLPSIVNEVLKSVVA YEERVLPSIVNEVLKSVVAKFNASQLITQR R V L L K S 0 0 1 0 0 0 1 0 0 1 2 1 0 0 1 1 0 0 0 3 0 0 11 0 1209.7333 Q99623 Q99623 132 142 PHB2 Prohibitin-2 yes yes 2 0.00069013 127.76 By MS/MS 7.5 0.5 2 2 4 22729000 22729000 0 14894 2254 15739 38131;38132;38133;38134 30535;30536;30537;30538;30539 30539 5 320340 0 VLPTQPNPVDASR LQSLDLEFGSGFQPRVLPTQPNPVDASRAQ PRVLPTQPNPVDASRAQFFLHLSPSHYALL R V L S R A 1 1 1 1 0 1 0 0 0 0 1 0 0 0 3 1 1 0 0 2 0 0 13 0 1392.7361 Q8N766 Q8N766 276 288 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.013024 88.803 By MS/MS 2.5 1.12 1 1 1 1 4 2057400 2057400 0 14895 1931 15740 38135;38136;38137;38138 30540 30540 1 370430 0 VLQALEGLK MPSHFSRGSKSVARRVLQALEGLKMVEKDQ KSVARRVLQALEGLKMVEKDQDGGRKLTPQ R V L L K M 1 0 0 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 969.58588 P39019 P39019 103 111 RPS19 40S ribosomal protein S19 yes yes 2 0.002079 120.31 By MS/MS By MS/MS 10 0 3 2 1 62722000 62451000 271340 14896 853 15741 38139;38140;38141 30541;30542;30543;30544 30543 4 3365900 347380 VLQALEGLKMVEKDQDGGR MPSHFSRGSKSVARRVLQALEGLKMVEKDQ LEGLKMVEKDQDGGRKLTPQGQRDLDRIAG R V L G R K 1 1 0 2 0 2 2 3 0 0 3 2 1 0 0 0 0 0 0 2 0 0 19 2 2085.0888 P39019 P39019 103 121 RPS19 40S ribosomal protein S19 yes yes 3 0.010464 86.411 By MS/MS 10 0 1 1 523150 523150 0 14897 853 15742 38142 30545 30545 438 1 28196 0 VLQALGSEPIQYAVPVVK LFISTRLGTDEISPRVLQALGSEPIQYAVP ALGSEPIQYAVPVVKYDRKGYKPRSRQLLL R V L V K Y 2 0 0 0 0 2 1 1 0 1 2 1 0 0 2 1 0 0 1 4 0 0 18 0 1910.0877 O00159 O00159 910 927 MYO1C Unconventional myosin-Ic yes yes 2 4.5059E-11 230.69 By MS/MS 4 0 1 1 2624300 2624300 0 14898 85 15743 38143 30546 30546 1 246970 0 VLQAQGSSDPEEESVLYSNR GQYAEASALYGRALRVLQAQGSSDPEEESV GSSDPEEESVLYSNRAACHLKDGNCRDCIK R V L N R A 1 1 1 1 0 2 3 1 0 0 2 0 0 0 1 4 0 0 1 2 0 0 20 0 2207.0342 Q15785 Q15785 38 57 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 1.0986E-59 382.95 By MS/MS 8.5 0.5 1 1 2 3813500 3813500 0 14899 1532 15744 38144;38145 30547 30547 1 49018 0 VLQATVVAVGSGSK VTKGGIMLPEKSQGKVLQATVVAVGSGSKG KVLQATVVAVGSGSKGKGGEIQPVSVKVGD K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 P61604 P61604 41 54 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 8.4053E-24 276.12 By MS/MS 10 0 1 1 5115900 5115900 0 14900 1126 15745 38146 30548 30548 1 275730 0 VLQDLVMDILR LDRLIELKEHPAHERVLQDLVMDILRVLST AHERVLQDLVMDILRVLSTPDLEVRKKTLQ R V L L R V 0 1 0 2 0 1 0 0 0 1 3 0 1 0 0 0 0 0 0 2 0 0 11 0 1313.7377 P53618 P53618 317 327 COPB1 Coatomer subunit beta yes yes 2 0.0053484 102.52 By MS/MS 4.5 0.5 1 1 2 416420 416420 0 14901 1033 15746 38147;38148 30549;30550 30549 572 2 32387 0 VLQGDLVMNVYR SHVPEVDPGSAELQKVLQGDLVMNVYRDGA LQKVLQGDLVMNVYRDGAWGAFRHFLLEED K V L Y R D 0 1 1 1 0 1 0 1 0 0 2 0 1 0 0 0 0 0 1 3 0 0 12 0 1405.7388 P49327 P49327 1496 1507 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.4056E-05 175.33 By MS/MS 2.5 0.957 1 2 2 1 6 7592600 7592600 0 14902 946 15747;15748 38149;38150;38151;38152;38153;38154 30551;30552;30553;30554;30555 30552 513 5 2052600 0 VLQGLIEVR RSGEQCSVEPDLISKVLQGLIEVRSPHLEE PDLISKVLQGLIEVRSPHLEELLTAFFSAT K V L V R S 0 1 0 0 0 1 1 1 0 1 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1025.6233 Q8N201 Q8N201 1544 1552 INTS1 Integrator complex subunit 1 yes yes 2 0.0059401 107.57 By MS/MS 2 0 1 1 232860 232860 0 14903 1907 15749 38155 30556 30556 1 78764 0 VLQHYQESDKGEELGPGNVQK PRLCSGVLGTVVHGKVLQHYQESDKGEELG ESDKGEELGPGNVQKEVSSSFDHVIKETTR K V L Q K E 0 0 1 1 0 3 3 3 1 0 2 2 0 0 1 1 0 0 1 2 0 0 21 1 2354.1503 Q9Y6C9 Q9Y6C9 91 111 MTCH2 Mitochondrial carrier homolog 2 yes yes 4 0.019339 59.252 By MS/MS 8 0 1 1 915860 915860 0 14904 2938 15750 38156 30557;30558 30557 2 11563 0 VLQLFTR LQAHGHDVNSFVRSRVLQLFTRIVQQKALP VNSFVRSRVLQLFTRIVQQKALPLTRFQAV R V L T R I 0 1 0 0 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 7 0 875.52289 Q15021 Q15021 384 390 NCAPD2 Condensin complex subunit 1 yes yes 2 0.034509 101.33 By MS/MS 3.5 0.5 1 1 2 771930 771930 0 14905 1474 15751 38157;38158 30559 30559 1 31469 0 VLQLYPNNK LAVNDFELARADFQKVLQLYPNNKAAKTQL RADFQKVLQLYPNNKAAKTQLAVCQQRIRR K V L N K A 0 0 2 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 9 0 1087.6026 Q02790 Q02790 379 387 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0020542 120.62 By MS/MS 6 0 1 1 5680100 5680100 0 14906 1279 15752 38159 30560 30560 1 39046 0 VLQNIIK LYQKTACHKAVVNEKVLQNIIKTLRVPLSL HKAVVNEKVLQNIIKTLRVPLSLKYSCPSE K V L I K T 0 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 7 0 826.52764 Q7Z3U7 Q7Z3U7 1435 1441 MON2 Protein MON2 homolog yes yes 2 0.01747 116 By MS/MS 2 0 1 1 532210 532210 0 14907 1787 15753 38160 30561 30561 1 180020 0 VLQSFTVDSSK VKIAGPGLGSGVRARVLQSFTVDSSKAGLA VRARVLQSFTVDSSKAGLAPLEVRVLGPRG R V L S K A 0 0 0 1 0 1 0 0 0 0 1 1 0 1 0 3 1 0 0 2 0 0 11 0 1209.6241 O75369 O75369 1439 1449 FLNB Filamin-B yes yes 2 0.0059717 101.35 By MS/MS 2 0.816 1 1 1 3 807970 807970 0 14908 315 15754 38161;38162;38163 30562 30562 1 203030 0 VLREEQEHK VHLEQAVSGELCRRRVLREEQEHKTKDPKE ELCRRRVLREEQEHKTKDPKEKNTSSETTM R V L H K T 0 1 0 0 0 1 3 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1166.6044 Q15021 Q15021 954 962 NCAPD2 Condensin complex subunit 1 yes yes 3 0.028252 78.264 By MS/MS 3 0.816 1 1 1 3 450120 450120 0 14909 1474 15755 38164;38165;38166 30563 30563 1 19109 0 VLRPQVTAVAQQNQGEVPEPQDMK KFRRQHEQLRAVIVRVLRPQVTAVAQQNQG AQQNQGEVPEPQDMKVAEVLFDAADANAIE R V L M K V 2 1 1 1 0 5 2 1 0 0 1 1 1 0 3 0 1 0 0 4 0 0 24 1 2661.3544 Q14204 Q14204 483 506 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 3.7768E-09 188.44 By MS/MS 1.5 0.5 1 1 2 2807800 2807800 0 14910 1433 15756 38167;38168 30564;30565 30564 843 2 793900 0 VLSAADKGNVK ______________________________ ______________________________ M V L V K A 2 0 1 1 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 2 0 0 11 1 1100.619 CON__P01966 CON__P01966 2 12 yes yes 2 0.033877 99.013 By MS/MS 10 0 1 1 1102600 1102600 0 + 14911 38 15757 38169 30566 30566 1 59424 0 VLSEAAISASLEK EELCNSCEMENEVLKVLSEAAISASLEKFE LKVLSEAAISASLEKFEIPVKIRLSPEPWT K V L E K F 3 0 0 0 0 0 2 0 0 1 2 1 0 0 0 3 0 0 0 1 0 0 13 0 1316.7187 O95573 O95573 661 673 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 1.0262E-05 196.16 By MS/MS 5 0 1 1 1336800 1336800 0 14912 417 15758 38170 30567 30567 1 13407 0 VLSECSPLMNDIFNK PITDDDVDRISLCLKVLSECSPLMNDIFNK VLSECSPLMNDIFNKECRQSLSHMLSAKLE K V L N K E 0 0 2 1 1 0 1 0 0 1 2 1 1 1 1 2 0 0 0 1 0 0 15 0 1765.8379 P53618 P53618 619 633 COPB1 Coatomer subunit beta yes yes 2 3.3648E-07 213.84 By MS/MS 4.5 0.5 1 1 2 817300 817300 0 14913 1033 15759 38171;38172 30568 30568 573 1 58629 0 VLSFIPPDGNFR SFHPCIRFKRWESERVLSFIPPDGNFRLIS SERVLSFIPPDGNFRLISYRVSSQNLVAIP R V L F R L 0 1 1 1 0 0 0 1 0 1 1 0 0 2 2 1 0 0 0 1 0 0 12 0 1360.7139 Q9Y2T2 Q9Y2T2 247 258 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.008922 85.807 By MS/MS 7 0 1 1 919080 919080 0 14914 2843 15760 38173 30569 30569 1 14428 0 VLSGTIHAGQPVK MYSTDDGVQFHAFGRVLSGTIHAGQPVKVL GRVLSGTIHAGQPVKVLGENYTLEDEEDSQ R V L V K V 1 0 0 0 0 1 0 2 1 1 1 1 0 0 1 1 1 0 0 2 0 0 13 0 1305.7405 Q15029 Q15029 496 508 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 5.7161E-06 181.53 By MS/MS 4.5 1.12 1 1 1 1 4 1585800 1585800 0 14915 1476 15761 38174;38175;38176;38177 30570;30571 30570 2 73541 0 VLSIGDGIAR ILGADTSVDLEETGRVLSIGDGIARVHGLR EETGRVLSIGDGIARVHGLRNVQAEEMVEF R V L A R V 1 1 0 1 0 0 0 2 0 2 1 0 0 0 0 1 0 0 0 1 0 0 10 0 999.57129 P25705 P25705 74 83 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.1595E-07 190.62 By MS/MS By MS/MS 7.4 1.62 5 1 1 1 2 8 2 137460000 134840000 2623000 14916 723 15762 38178;38179;38180;38181;38182;38183;38184;38185;38186;38187 30572;30573;30574;30575;30576;30577;30578;30579;30580 30575 8 1048300 2687900 VLSIGLPVAR PSESTWKLAVSSLLRVLSIGLPVARQHASS SSLLRVLSIGLPVARQHASSGKFDSMWPEL R V L A R Q 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 10 0 1023.6441 Q7Z3U7 Q7Z3U7 1469 1478 MON2 Protein MON2 homolog yes yes 2 0.00025 143.73 By MS/MS 2 0 1 1 1201400 1201400 0 14917 1787 15763 38188 30581 30581 1 406380 0 VLSLQEEIAK RLQLSEEEAKVATGRVLSLQEEIAKLRKDL VATGRVLSLQEEIAKLRKDLEQTRSEKKCI R V L A K L 1 0 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1128.639 Q9Y4I1 Q9Y4I1 985 994 MYO5A Unconventional myosin-Va yes yes 2 0.01093 92.239 By MS/MS 2 0 1 1 259650 259650 0 14918 2896 15764 38189 30582 30582 1 87823 0 VLSLVDDPR LWLTKTKLIEGLPEKVLSLVDDPRNHIENQ EGLPEKVLSLVDDPRNHIENQDECVLNVIS K V L P R N 0 1 0 2 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 9 0 1012.5553 Q9BZE1 Q9BZE1 136 144 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 0.00050399 146.58 By MS/MS 7 0 1 1 3210100 3210100 0 14919 2376 15765 38190 30583 30583 1 50393 0 VLSNTTTTTK NSADLLRWTTATTMKVLSNTTTTTKAVLQA ATTMKVLSNTTTTTKAVLQAVSDGQWWKKS K V L T K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 5 0 0 1 0 0 10 0 1064.5714 A2RRP1 A2RRP1 1417 1426 NBAS Neuroblastoma-amplified sequence yes yes 2 0.0065657 102.06 By MS/MS 2 0.816 1 1 1 3 508820 508820 0 14920 11 15766 38191;38192;38193 30584 30584 1 109470 0 VLSPQDQDVQDNPR SMRRAPLMWELIHKKVLSPQDQDVQDNPRG KVLSPQDQDVQDNPRGRSAKLRAAIKL___ K V L P R G 0 1 1 3 0 3 0 0 0 0 1 0 0 0 2 1 0 0 0 2 0 0 14 0 1609.7696 A6NJ78 A6NJ78 382 395 METTL15 Probable methyltransferase-like protein 15 yes yes 2 2.4681E-05 195.72 By MS/MS 7 0 1 1 804650 804650 0 14921 24 15767 38194 30585 30585 1 12632 0 VLSQEEPDSAR ______________________________ ______________________________ M V L A R G 1 1 0 1 0 1 2 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 11 0 1229.5888 Q8TF71 Q8TF71 2 12 SLC16A10 Monocarboxylate transporter 10 yes yes 2 0.0030168 109.16 By MS/MS 1 0 1 1 100800 100800 0 14922 2009 15768 38195 30586 30586 1 24289 0 VLSQPQLR GALTQLIQLYHRFHRVLSQPQLRALPARAE LYHRFHRVLSQPQLRALPARAELINIHHLM R V L L R A 0 1 0 0 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 939.55016 Q8N1B4 Q8N1B4 691 698 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 0.03867 86.794 By MS/MS 4 0 1 1 907270 907270 0 14923 1902 15769 38196 30587 30587 1 85381 0 VLSRPNAQELPSMYQR PTGSKDLQMVNISLRVLSRPNAQELPSMYQ LSRPNAQELPSMYQRLGLDYEERVLPSIVN R V L Q R L 1 2 1 0 0 2 1 0 0 0 2 0 1 0 2 2 0 0 1 1 0 0 16 1 1887.9625 Q99623 Q99623 108 123 PHB2 Prohibitin-2 yes yes 2;3 0.00045614 156.2 By MS/MS 7.71 0.7 3 3 1 7 54788000 54788000 0 14924 2254 15770;15771 38197;38198;38199;38200;38201;38202;38203 30588;30589;30590;30591;30592;30593;30594 30588 1049 7 771390 0 VLSSIEQK VAYKNVVGGQRAAWRVLSSIEQKSNEEGSE GQRAAWRVLSSIEQKSNEEGSEEKGPEVRE R V L Q K S 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 8 0 902.5073 P31947 P31947 61 68 SFN 14-3-3 protein sigma yes yes 2 0.006969 104.44 By MS/MS By matching 8.33 0.471 2 1 2 1 13354000 13277000 76873 14925 794 15772 38204;38205;38206 30595 30595 1 169520 103740 VLSTPDLEVR AHERVLQDLVMDILRVLSTPDLEVRKKTLQ MDILRVLSTPDLEVRKKTLQLALDLVSSRN R V L V R K 0 1 0 1 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 2 0 0 10 0 1127.6186 P53618 P53618 328 337 COPB1 Coatomer subunit beta yes yes 2 0.042269 76.064 By MS/MS 5 0.816 1 1 1 3 33114000 33114000 0 14926 1033 15773 38207;38208;38209 30596 30596 1 2396000 0 VLSTVHTHSSVK LSLLVLHRLLCEHFRVLSTVHTHSSVKSVP HFRVLSTVHTHSSVKSVPENLLKCFGEQNK R V L V K S 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 3 2 0 0 3 0 0 12 0 1293.7041 Q13155 Q13155 148 159 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 6.159E-18 210.08 By MS/MS 7.5 0.5 1 1 2 1053200 1053200 0 14927 1360 15774 38210;38211 30597 30597 1 15731 0 VLTAEELNAAQTSVAYGCIK LKRSMDKLKEKERDKVLTAEELNAAQTSVA ELNAAQTSVAYGCIKYADLSHNRLNDYIFS K V L I K Y 4 0 1 0 1 1 2 1 0 1 2 1 0 0 0 1 2 0 1 2 0 0 20 0 2137.0725 P54136 P54136 485 504 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 5.2874E-74 365.19 By MS/MS 5 0 1 1 1408700 1408700 0 14928 1043 15775 38212 30598 30598 1 14128 0 VLTELLEQER PWPLNEAQVQASVVKVLTELLEQERKKVVD ASVVKVLTELLEQERKKVVDTTKESSRKGW K V L E R K 0 1 0 0 0 1 3 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1228.6663 Q13428 Q13428 1318 1327 TCOF1 Treacle protein yes yes 2 0.0011708 135.86 By MS/MS 2 0 1 1 0 0 0 14929 1383 15776 38213 30599 30599 1 0 0 VLTGQVHELK MNLYWFLYIVAFAAKVLTGQVHELKDLREY AFAAKVLTGQVHELKDLREYDTAEAQSLKP K V L L K D 0 0 0 0 0 1 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 0 10 0 1122.6397 P27544 P27544 309 318 CERS1 Ceramide synthase 1 yes yes 2 0.03259 86.882 By MS/MS 1.5 0.5 1 1 2 82867 82867 0 14930 742 15777 38214;38215 30600 30600 1 22859 0 VLTGVAGEDAECHAAK SDTKYLEMIYSMCKKVLTGVAGEDAECHAA LTGVAGEDAECHAAKLLEVIILQCKGRGID K V L A K L 4 0 0 1 1 0 2 2 1 0 1 1 0 0 0 0 1 0 0 2 0 0 16 0 1626.7672 O95373 O95373 725 740 IPO7 Importin-7 yes yes 2;3 7.3547E-05 216.83 By MS/MS 4 0.707 1 2 1 4 1969700 1969700 0 14931 406 15778 38216;38217;38218;38219 30601;30602 30601 2 111490 0 VLTIDPTEFK KGNNVYCLDRECRPRVLTIDPTEFKFKLAL ECRPRVLTIDPTEFKFKLALINRKYDEVLH R V L F K F 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 2 0 0 1 0 0 10 0 1161.6281 P53621 P53621 589 598 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00024478 144.09 By MS/MS 3 1.41 1 1 1 1 1 5 8142600 8142600 0 14932 1034 15779 38220;38221;38222;38223;38224 30603;30604;30605;30606;30607 30605 5 718120 0 VLTLSDDLER EAQRRRMDEISDHAKVLTLSDDLERTIEER SDHAKVLTLSDDLERTIEERVNILFDFVKK K V L E R T 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1159.6085 P55010 P55010 225 234 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.051823 71.451 By MS/MS 6 0 1 1 3963800 3963800 0 14933 1050 15780 38225 30608 30608 1 27248 0 VLTLSDDLERTIEER EAQRRRMDEISDHAKVLTLSDDLERTIEER VLTLSDDLERTIEERVNILFDFVKKKKEEG K V L E R V 0 2 0 2 0 0 3 0 0 1 3 0 0 0 0 1 2 0 0 1 0 0 15 1 1787.9265 P55010 P55010 225 239 EIF5 Eukaryotic translation initiation factor 5 yes yes 2;3 0.0030456 158.3 By MS/MS 6 0 2 2 4580700 4580700 0 14934 1050 15781 38226;38227 30609;30610 30610 2 31489 0 VLTPEEQLADKLR QEEIKKRLEEPEEPKVLTPEEQLADKLRLK PKVLTPEEQLADKLRLKKLQEESDLELAKE K V L L R L 1 1 0 1 0 1 2 0 0 0 3 1 0 0 1 0 1 0 0 1 0 0 13 1 1510.8355 O75822 O75822 107 119 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 2;3 0.0027685 122.55 By MS/MS 7.33 0.471 2 1 3 5051000 5051000 0 14935 349 15782 38228;38229;38230 30611;30612 30612 2 77821 0 VLTPELYAELR DEFPDLSAHNNHMAKVLTPELYAELRAKST HMAKVLTPELYAELRAKSTPSGFTLDDVIQ K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 P12277 P12277 33 43 CKB Creatine kinase B-type yes yes 2 0.00037769 133.99 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 10755000 10719000 35232 14936 592 15783 38231;38232;38233;38234;38235 30613 30613 1 175350 63452 VLTQPSQSAVR CATLEENINSALDIKVLTQPSQSAVRGGPG LDIKVLTQPSQSAVRGGPGRSTMPTPGNTA K V L V R G 1 1 0 0 0 2 0 0 0 0 1 0 0 0 1 2 1 0 0 2 0 0 11 0 1184.6513 Q9UP83 Q9UP83 299 309 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 6.3598E-06 176.6 By MS/MS 4 0 1 1 1457200 1457200 0 14937 2797 15784 38236 30614 30614 1 137130 0 VLTSGIFETK QADYVPSDQDLLRCRVLTSGIFETKFQVDK LLRCRVLTSGIFETKFQVDKVNFHMFDVGG R V L T K F 0 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 2 0 0 1 0 0 10 0 1093.6019 P63092;Q5JWF2 P63092 202 211 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.00022074 145.72 By MS/MS 7 0 1 1 2052600 2052600 0 14938 1193 15785 38237 30615 30615 1 32223 0 VLTVINQTQK SKLSKIRVVRKSIARVLTVINQTQKENLRK KSIARVLTVINQTQKENLRKFYKGKKYKPL R V L Q K E 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 2 0 0 2 0 0 10 0 1142.6659 P42766 P42766 57 66 RPL35 60S ribosomal protein L35 yes yes 1;2 0.00089163 134.77 By MS/MS By MS/MS 9.25 0.433 3 1 3 1 7280800 7220900 59884 14939 888 15786 38238;38239;38240;38241 30616;30617;30618;30619 30617 3 172750 136550 VLTVINQTQKENLR SKLSKIRVVRKSIARVLTVINQTQKENLRK RVLTVINQTQKENLRKFYKGKKYKPLDLRP R V L L R K 0 1 2 0 0 2 1 0 0 1 2 1 0 0 0 0 2 0 0 2 0 0 14 1 1654.9366 P42766 P42766 57 70 RPL35 60S ribosomal protein L35 yes yes 2 1.9318E-23 285.32 By MS/MS 9 0 1 1 1693500 1693500 0 14940 888 15787 38242 30620 30620 1 33329 0 VLVAFGQR FSYPLDLLLKLHDERVLVAFGQRDGIRVGH LKLHDERVLVAFGQRDGIRVGHAVLAINGM R V L Q R D 1 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 8 0 888.51814 Q9Y296 Q9Y296 47 54 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 2 0.026713 92.191 By MS/MS 8 0 1 1 685400 685400 0 14941 2823 15788 38243 30621 30621 1 8653.1 0 VLVALASEELAK NSGGFLSKDKGLLGKVLVALASEELAKGWT LGKVLVALASEELAKGWTQWYDLTEDGTRP K V L A K G 3 0 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 12 0 1241.7231 A0FGR8 A0FGR8 891 902 ESYT2 Extended synaptotagmin-2 yes yes 2 3.43E-06 192.64 By MS/MS 4 0 1 1 2582800 2582800 0 14942 6 15789 38244 30622;30623 30622 2 243060 0 VLVAQHDVYK DKVAQDLCKVAGIAKVLVAQHDVYKGLLPE AGIAKVLVAQHDVYKGLLPEELTPLILATQ K V L Y K G 1 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 3 0 0 10 0 1170.6397 P13804 P13804 76 85 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.0012537 118.71 By MS/MS 8 0 1 1 1110000 1110000 0 14943 606 15790 38245 30624 30624 1 14014 0 VLVDGEEHVGFLK VVPGVKPQDWISAARVLVDGEEHVGFLKTD ARVLVDGEEHVGFLKTDGSFVVHDIPSGSY R V L L K T 0 0 0 1 0 0 2 2 1 0 2 1 0 1 0 0 0 0 0 3 0 0 13 0 1440.7613 Q9NPA0 Q9NPA0 67 79 EMC7 ER membrane protein complex subunit 7 yes yes 2 0.00030274 152.04 By MS/MS 9 0 1 1 1103100 1103100 0 14944 2529 15791 38246 30625 30625 1 21710 0 VLVDQTTGLSR VEDMFSRFGRIINSRVLVDQTTGLSRGVAF INSRVLVDQTTGLSRGVAFIRFDKRSEAEE R V L S R G 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 1 2 0 0 2 0 0 11 0 1187.651 Q15717 Q15717 137 147 ELAVL1 ELAV-like protein 1 yes yes 2 1.063E-05 172.61 By MS/MS By matching 8 0 2 1 1 2494700 2473500 21187 14945 1525 15792 38247;38248 30626 30626 1 31228 28590 VLVDSLVEDDR QQQWLLYLSNSGYLKVLVDSLVEDDRTLQS GYLKVLVDSLVEDDRTLQSLLTPQPPLLKA K V L D R T 0 1 0 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 3 0 0 11 0 1258.6405 Q92621 Q92621 1524 1534 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00015439 147.12 By MS/MS 2.5 0.5 1 1 2 483190 483190 0 14946 2065 15793 38249;38250 30627 30627 1 139980 0 VLVEGPLNNLR QPLWNHLLNYYKEQKVLVEGPLNNLRESLM KEQKVLVEGPLNNLRESLMQFSKPRKLVNT K V L L R E 0 1 2 0 0 0 1 1 0 0 3 0 0 0 1 0 0 0 0 2 0 0 11 0 1222.7034 Q92900 Q92900 908 918 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0029174 109.42 By MS/MS 3.5 0.5 1 1 2 600590 600590 0 14947 2077 15794 38251;38252 30628 30628 1 33022 0 VLVEQQQDR LAEALLSGDLEKFSRVLVEQQQDRARREQE LEKFSRVLVEQQQDRARREQERIRLFSADP R V L D R A 0 1 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 1113.5778 Q5TDH0 Q5TDH0 174 182 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0010691 133.13 By MS/MS 6.5 0.5 1 1 2 2138400 2138400 0 14948 1641 15795 38253;38254 30629 30629 1 16579 0 VLVFNPEEPDGGFPGLK LDSQRRPVVQVVDERVLVFNPEEPDGGFPG VFNPEEPDGGFPGLKWGGTHDGPKKKGKDL R V L L K W 0 0 1 1 0 0 2 3 0 0 2 1 0 2 3 0 0 0 0 2 0 0 17 0 1813.9251 Q86Y91 Q86Y91 37 53 KIF18B Kinesin-like protein KIF18B yes yes 2 0.0019604 109.6 By MS/MS 4 0 1 1 133110 133110 0 14949 1852 15796 38255 30630 30630 1 12527 0 VLVLGDSGVGK ______________________________ DRVKVLVLGDSGVGKSSLVHLLCQNQVLGN K V L G K S 0 0 0 1 0 0 0 3 0 0 2 1 0 0 0 1 0 0 0 3 0 0 11 0 1042.6023 Q5HYI8 Q5HYI8 9 19 RABL3 Rab-like protein 3 yes yes 2 0.00015115 147.4 By MS/MS 8 0 1 1 6252100 6252100 0 14950 1601 15797 38256 30631 30631 1 78932 0 VLVNDAQKVTEGQQER MAILQIMKELNKRGRVLVNDAQKVTEGQQE LVNDAQKVTEGQQERLERQHWTMTKIQKHQ R V L E R L 1 1 1 1 0 3 2 1 0 0 1 1 0 0 0 0 1 0 0 3 0 0 16 1 1812.933 Q13263 Q13263 312 327 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 1.1864E-16 269.88 By MS/MS 5.25 1.56 1 2 2 1 1 1 8 20643000 20643000 0 14951 1367 15798 38257;38258;38259;38260;38261;38262;38263;38264 30632;30633;30634;30635;30636 30632 5 1530100 0 VLVNDAQKVTEGQQERLER MAILQIMKELNKRGRVLVNDAQKVTEGQQE DAQKVTEGQQERLERQHWTMTKIQKHQEHI R V L E R Q 1 2 1 1 0 3 3 1 0 0 2 1 0 0 0 0 1 0 0 3 0 0 19 2 2211.1608 Q13263 Q13263 312 330 TRIM28 Transcription intermediary factor 1-beta yes yes 3 0.0095643 82.942 By MS/MS 4.5 0.5 1 1 2 3059200 3059200 0 14952 1367 15799 38265;38266 30637 30637 1 248080 0 VLVQNAAGSQEK EGILKTAKVLVEDTKVLVQNAAGSQEKLAQ DTKVLVQNAAGSQEKLAQAAQSSVATITRL K V L E K L 2 0 1 0 0 2 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1242.6568 Q9Y490 Q9Y490 2032 2043 TLN1 Talin-1 yes yes 2 6.3332E-13 242.49 By MS/MS By matching 2.83 1.34 1 2 1 1 1 5 1 5745300 5725500 19767 14953 2888 15800 38267;38268;38269;38270;38271;38272 30638;30639;30640;30641 30639 4 1470300 27954 VLVTETQVIR QHLYSSDPLYVPDDRVLVTETQVIRETLWL VPDDRVLVTETQVIRETLWLLSGVKKLFIF R V L I R E 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 2 0 0 3 0 0 10 0 1156.6816 Q96RT8 Q96RT8 263 272 TUBGCP5 Gamma-tubulin complex component 5 yes yes 2 4.9767E-05 157.34 By MS/MS 3.5 0.5 1 1 2 763540 763540 0 14954 2227 15801 38273;38274 30642 30642 1 51200 0 VLVVGDAAVGK ______________________________ HLFKVLVVGDAAVGKTSLVQRYSQDSFSKH K V L G K T 2 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 4 0 0 11 0 1026.6073 O14966 O14966 10 20 RAB29 Ras-related protein Rab-7L1 yes yes 2 0.0052661 94.309 By MS/MS 9 0 1 1 1360900 1360900 0 14955 150 15802 38275 30643 30643 1 26782 0 VLYAYGYYTGEPSK PRIASGLGLAWIVGRVLYAYGYYTGEPSKR RVLYAYGYYTGEPSKRSRGALGSIALLGLV R V L S K R 1 0 0 0 0 0 1 2 0 0 1 1 0 0 1 1 1 0 4 1 0 0 14 0 1609.7664 O14880 O14880 98 111 MGST3 Microsomal glutathione S-transferase 3 yes yes 2 1.345E-11 193.96 By MS/MS 10 0 1 1 0 0 0 14956 143 15803 38276 30644 30644 1 0 0 VLYDAEISQIHQSVTDTNVILSMDNSR QSKVDLLNQEIEFLKVLYDAEISQIHQSVT SVTDTNVILSMDNSRNLDLDSIIAEVKAQY K V L S R N 1 1 2 3 0 2 1 0 1 3 2 0 1 0 0 4 2 0 1 3 0 0 27 0 3047.487 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 315 341 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 1.0259E-14 158.35 By matching By MS/MS 3.5 0.5 1 1 1 1 196080 96555 99522 + 14957 55 15804 38277;38278 30645 30645 47 1 9086.5 12668 VLYNLEVLSSK ESLFRSFAPGMSTFRVLYNLEVLSSKLMPT STFRVLYNLEVLSSKLMPTADDDMARSCAK R V L S K L 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 1 2 0 0 11 0 1263.7075 Q9UPU5 Q9UPU5 1174 1184 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 1.6971E-05 166.69 By MS/MS 2 0 1 1 509390 509390 0 14958 2802 15805 38279 30646 30646 1 172290 0 VLYPNDNFFEGK IQAVLDRNLAENISRVLYPNDNFFEGKELR ISRVLYPNDNFFEGKELRLKQEYFVVAATL R V L G K E 0 0 2 1 0 0 1 1 0 0 1 1 0 2 1 0 0 0 1 1 0 0 12 0 1441.6878 P06737;P11216 P06737 279 290 PYGL;PYGB Glycogen phosphorylase, liver form;Glycogen phosphorylase, brain form no no 2 0.036784 76.332 By MS/MS 4 0 1 1 833500 833500 0 14959 501 15806 38280 30647 30647 1 78438 0 VLYYTGR ISAHIDSGKTTLTERVLYYTGRIAKMHEVK GKTTLTERVLYYTGRIAKMHEVKGKDGVGA R V L G R I 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 2 1 0 0 7 0 870.45995 Q96RP9 Q96RP9 66 72 GFM1 Elongation factor G, mitochondrial yes yes 2 0.035286 100.74 By MS/MS 5.5 0.5 1 1 2 5773500 5773500 0 14960 2223 15807 38281;38282 30648 30648 1 55256 0 VMAEGTAVLR ______________________________ ______________________________ M V M L R R 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 2 0 0 10 0 1045.559 Q9Y3A3 Q9Y3A3 2 11 MOB4 MOB-like protein phocein yes yes 2 0.012187 101.46 By MS/MS 9 0 1 1 0 0 0 14961 2861 15808 38283 30649 30649 1 0 0 VMEHFIK TNGDTHLGGEDFDQRVMEHFIKLYKKKTGK GGEDFDQRVMEHFIKLYKKKTGKDVRKDNR R V M I K L 0 0 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 7 0 902.46841 P11021 P11021 262 268 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.046563 85.359 By MS/MS 5 0 1 1 352430 352430 0 14962 571 15809 38284 30650 30650 257 1 3534.7 0 VMETNYFGPVALTK YRGTIMDTTVDVDKRVMETNYFGPVALTKA RVMETNYFGPVALTKALLPSMIKRRQGHIV R V M T K A 1 0 1 0 0 0 1 1 0 0 1 1 1 1 1 0 2 0 1 2 0 0 14 0 1568.7909 Q6IAN0 Q6IAN0 162 175 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 1.2739E-33 313.36 By MS/MS 8 0 2 2 1962700 1962700 0 14963 1681 15810;15811 38285;38286 30651;30652 30652 907 2 24779 0 VMGLVPAK LLGMEFSGRDASGKRVMGLVPAKGLATSVL RDASGKRVMGLVPAKGLATSVLLSPDFLWD R V M A K G 1 0 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 2 0 0 8 0 813.47825 P49327 P49327 1613 1620 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.01672 103.29 By MS/MS 2.5 0.5 1 1 2 5012700 5012700 0 14964 946 15812 38287;38288 30653;30654 30654 2 1488600 0 VMGNQVFPEVTR ASLLSNMSRHPLLHRVMGNQVFPEVTRLLT LHRVMGNQVFPEVTRLLTSHTGNTSNSEDI R V M T R L 0 1 1 0 0 1 1 1 0 0 0 0 1 1 1 0 1 0 0 3 0 0 12 0 1375.6918 Q13835 Q13835 631 642 PKP1 Plakophilin-1 yes yes 2 0.00071324 145.46 By MS/MS 10 0 1 1 142160 0 142160 14965 1410 15813 38289 30655 30655 805 1 0 182010 VMGSGPK RGRRFMCSGPDKVMKVMGSGPKESALKALN SGPDKVMKVMGSGPKESALKALNSDMPLYI K V M P K E 0 0 0 0 0 0 0 2 0 0 0 1 1 0 1 1 0 0 0 1 0 0 7 0 674.34215 Q8ND04 Q8ND04 870 876 SMG8 Protein SMG8 yes yes 2 0.041523 96.048 By MS/MS By matching 6 0.707 1 2 1 3 1 15221000 15188000 33635 14966 1954 15814 38290;38291;38292;38293 30656;30657 30657 2 136100 34466 VMGTFSTVTSTVK AVQLCESVANKLEGKVMGTFSTVTSTVKQA GKVMGTFSTVTSTVKQALQESLVQILQPQR K V M V K Q 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 2 4 0 0 3 0 0 13 0 1356.6959 P08240 P08240 374 386 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.00029295 152.04 By MS/MS 5 0 1 1 1473800 1473800 0 14967 522 15815 38294 30658 30658 225 1 14782 0 VMIPVPAGVEDGQTVR CVVCRGAGQAKQKKRVMIPVPAGVEDGQTV MIPVPAGVEDGQTVRMPVGKREIFITFRVQ R V M V R M 1 1 0 1 0 1 1 2 0 1 0 0 1 0 2 0 1 0 0 4 0 0 16 0 1666.8712 Q96EY1 Q96EY1 304 319 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 6.5366E-06 142.12 By MS/MS 7.33 0.471 2 1 3 8312100 8312100 0 14968 2150 15816;15817 38295;38296;38297 30659;30660 30660 1019 1 129490 0 VMLESFIDTQK LRDYVIEDDVNMAIRVMLESFIDTQKFSVM MAIRVMLESFIDTQKFSVMRSMRKTFARYL R V M Q K F 0 0 0 1 0 1 1 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 11 0 1309.6588 P49736 P49736 797 807 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00088583 123.86 By MS/MS 3.5 0.5 1 1 2 240640 240640 0 14969 958 15818 38298;38299 30661 30661 1 18787 0 VMLGETNPADSKPGTIR VAMVWEGLNVVKTGRVMLGETNPADSKPGT LGETNPADSKPGTIRGDFCIQVGRNIIHGS R V M I R G 1 1 1 1 0 0 1 2 0 1 1 1 1 0 2 1 2 0 0 1 0 0 17 1 1784.9091 P22392;O60361;P15531 P22392 89 105 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 2;3 0.0058852 182.72 By MS/MS 9.5 0.5 3 3 6 6924300 6924300 0 14970 692;625 15819;15820 38300;38301;38302;38303;38304;38305 30662;30663;30664;30665 30664 297 4 297260 0 VMPNAIVQSVGVSSGK LSNWTMEKVRREGVKVMPNAIVQSVGVSSG MPNAIVQSVGVSSGKLLIKLKDGRKVETDH K V M G K L 1 0 1 0 0 1 0 2 0 1 0 1 1 0 1 3 0 0 0 4 0 0 16 0 1571.8341 O95831 O95831 363 378 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.00026627 144.8 By MS/MS 5.75 0.829 2 1 1 4 11679000 11679000 0 14971 429 15821;15822 38306;38307;38308;38309 30666;30667 30666 164 2 115980 0 VMQEEIFGPILPIVPVK YIAPTVLTDVDPKTKVMQEEIFGPILPIVP QEEIFGPILPIVPVKNVDEAINFINEREKP K V M V K N 0 0 0 0 0 1 2 1 0 3 1 1 1 1 3 0 0 0 0 3 0 0 17 0 1908.0794 P51648 P51648 327 343 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2;3 0.00017365 179.46 By MS/MS 6 0 3 3 2233200 2233200 0 14972 1002 15823;15824 38310;38311;38312 30668;30669;30670;30671 30668 553 4 15352 0 VMQEQGTHPK ECWFPKATDKSFVEKVMQEQGTHPKFQKPK SFVEKVMQEQGTHPKFQKPKQLKDKADFCI K V M P K F 0 0 0 0 0 2 1 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1153.555 P35579 P35579 546 555 MYH9 Myosin-9 yes yes 2 4.3874E-05 157.75 By MS/MS 2 0 2 2 546310 546310 0 14973 824 15825;15826 38313;38314 30672;30673 30673 415 2 184790 0 VMQVLNADAIVVK PTANLDQKDKQFVAKVMQVLNADAIVVKLN AKVMQVLNADAIVVKLNSGDYKTIHLSSIR K V M V K L 2 0 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 4 0 0 13 0 1398.7905 Q7KZF4 Q7KZF4 347 359 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 3.2536E-05 180.66 By MS/MS By matching 4 0 3 2 1 3614300 3587900 26455 14974 1755 15827;15828 38315;38316;38317 30674;30675 30674 927 2 337640 56368 VMSDFAINQEQK ASAFSLPICEGLTQRVMSDFAINQEQKEAL TQRVMSDFAINQEQKEALSNLTALTSDSDT R V M Q K E 1 0 1 1 0 2 1 0 0 1 0 1 1 1 0 1 0 0 0 1 0 0 12 0 1408.6657 Q96EY7 Q96EY7 649 660 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 4.694E-13 244.01 By MS/MS By MS/MS 5 0 3 2 1 2620600 2581900 38710 14975 2151 15829;15830 38318;38319;38320 30676;30677;30678 30678 1021 3 25895 32508 VMSQEIQEQLHK LKKMVKDQQEAEKKKVMSQEIQEQLHKQQE KKKVMSQEIQEQLHKQQEVIADKQMSVKED K V M H K Q 0 0 0 0 0 3 2 0 1 1 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1468.7344 Q14204 Q14204 3255 3266 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.030908 76.655 By MS/MS 2 0.816 1 1 1 3 1122900 1122900 0 14976 1433 15831 38321;38322;38323 30679 30679 1 310570 0 VMTVNYNTHGELGEGAR QYLSQGNVVFKDSVKVMTVNYNTHGELGEG TVNYNTHGELGEGARKFVFFNIPQIQYKNP K V M A R K 1 1 2 0 0 0 2 3 1 0 1 0 1 0 0 0 2 0 1 2 0 0 17 0 1846.8632 P82663 P82663 29 45 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 3 0.0073396 88.992 By MS/MS 9 0 2 2 4461100 4461100 0 14977 1230 15832;15833 38324;38325 30680;30681 30680 741 2 87795 0 VMVELLGSYTEDNASQAR YEALVDCKKSDAASKVMVELLGSYTEDNAS ELLGSYTEDNASQARVDAHRCIVRALKDPN K V M A R V 2 1 1 1 0 1 2 1 0 0 2 0 1 0 0 2 1 0 1 2 0 0 18 0 1981.9415 Q7L2H7 Q7L2H7 184 201 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 3.0356E-11 236.05 By MS/MS 7 0 2 2 1529900 1529900 0 14978 1762 15834;15835 38326;38327 30682;30683 30682 933 2 24016 0 VMVQPINLIFR ______________________________ KVQKVMVQPINLIFRYLQNRSRIQVWLYEQ K V M F R Y 0 1 1 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 2 0 0 11 0 1328.7639 P62304 P62304 13 23 SNRPE Small nuclear ribonucleoprotein E yes yes 2 0.00049998 131.22 By MS/MS 10 0 1 1 380020 380020 0 14979 1153 15836 38328 30684 30684 657 1 20482 0 VMVTNVTSLLK VGDDPAVWQLKNSAKVMVTNVTSLLKTVKA NSAKVMVTNVTSLLKTVKAVEDEATKGTRA K V M L K T 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 1 2 0 0 3 0 0 11 0 1203.6897 Q9Y490;Q9Y4G6 Q9Y490 2120 2130 TLN1;TLN2 Talin-1;Talin-2 no no 2 1.6245E-05 166.86 By MS/MS 2 0 2 2 975550 975550 0 14980 2888;2895 15837;15838 38329;38330 30685;30686 30685 1204 2 329970 0 VNAELQAR KTGGLEIDSDFGGFRVNAELQARSNIWVAG SDFGGFRVNAELQARSNIWVAGDAACFYDI R V N A R S 2 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 899.48248 O95831 O95831 423 430 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.0039065 130.56 By MS/MS By matching 5.33 0.471 2 1 2 1 11282000 11233000 48734 14981 429 15839 38331;38332;38333 30687 30687 1 107800 40926 VNAGTLAVLQR AALEGKLVLLDGIHRVNAGTLAVLQRLIHD GIHRVNAGTLAVLQRLIHDRELSLYDGSRL R V N Q R L 2 1 1 0 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1140.6615 A3KMH1 A3KMH1 519 529 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 1.6317E-18 256.24 By MS/MS 3 0.816 1 1 1 3 1503000 1503000 0 14982 14 15840 38334;38335;38336 30688;30689 30688 2 295690 0 VNAIEHVIIPR SFVTLDEAIKITNRRVNAIEHVIIPRIERT TNRRVNAIEHVIIPRIERTLAYIITELDER R V N P R I 1 1 1 0 0 0 1 0 1 3 0 0 0 0 1 0 0 0 0 2 0 0 11 0 1259.735 Q9Y5K8 Q9Y5K8 169 179 ATP6V1D V-type proton ATPase subunit D yes yes 3 0.0035474 106.16 By MS/MS 8 0 1 1 688800 688800 0 14983 2914 15841 38337 30690 30690 1 8696 0 VNAVPRPIPEKK ILGRNLSGQPNFPCRVNAVPRPIPEKKWFM PCRVNAVPRPIPEKKWFMEPAVIVCLGGIL R V N K K W 1 1 1 0 0 0 1 0 0 1 0 2 0 0 3 0 0 0 0 2 0 0 12 2 1346.8034 Q9HD45 Q9HD45 430 441 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 3 0.028152 78.342 By MS/MS 2 0.816 1 1 1 3 728210 728210 0 14984 2519 15842 38338;38339;38340 30691 30691 1 189170 0 VNAVYLLPVPK TLSEDTLAGRLVMTKVNAVYLLPVPKQKLV VMTKVNAVYLLPVPKQKLVQTQGTKEKVYE K V N P K Q 1 0 1 0 0 0 0 0 0 0 2 1 0 0 2 0 0 0 1 3 0 0 11 0 1211.7278 P42694 P42694 531 541 HELZ Probable helicase with zinc finger domain yes yes 2 0.00013839 148.52 By MS/MS 2 0 1 1 102960 102960 0 14985 884 15843 38341 30692 30692 1 34826 0 VNDFETADILCPK SNLVTHLDSFLPICRVNDFETADILCPKAK CRVNDFETADILCPKAKRTSRFLSGIINFI R V N P K A 1 0 1 2 1 0 1 0 0 1 1 1 0 1 1 0 1 0 0 1 0 0 13 0 1520.7181 Q9BZD4 Q9BZD4 101 113 NUF2 Kinetochore protein Nuf2 yes yes 2 0.00024438 158.08 By MS/MS 6 0 1 1 1052800 1052800 0 14986 2375 15844 38342 30693 30693 1 7237.5 0 VNDTIQIDLETGK THDARTIRYPDPLIKVNDTIQIDLETGKIT IKVNDTIQIDLETGKITDFIKFDTGNLCMV K V N G K I 0 0 1 2 0 1 1 1 0 2 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1444.7409 P62701 P62701 156 168 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 2.4608E-06 241.35 By MS/MS 8.5 0.5 1 1 2 3660800 3660800 0 14987 1165 15845 38343;38344 30694 30694 1 47020 0 VNEAAPEKPQDDSGTAGGISSTSASVNR QLMGHRPQLENLLCKVNEAAPEKPQDDSGT GTAGGISSTSASVNRYILQLAQEYCGDCKN K V N N R Y 4 1 2 2 0 1 2 3 0 1 0 1 0 0 2 5 2 0 0 2 0 0 28 1 2744.2849 Q5T4S7 Q5T4S7 3767 3794 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 3.0227E-07 109.98 By MS/MS 2 0.816 1 1 1 3 636710 636710 0 14988 1633 15846 38345;38346;38347 30695 30695 1 135060 0 VNEAREELMR TQGLIFVVDSNDRERVNEAREELMRMLAED NDRERVNEAREELMRMLAEDELRDAVLLVF R V N M R M 1 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 1 1245.6136 P84077;P61204 P84077 100 109 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 0.039136 99.013 By MS/MS 9.5 0.5 1 1 2 2166700 2166700 0 14989 1116 15847 38348;38349 30696 30696 1 47918 0 VNEATAVLYAR LNCKSKRAVRDYLFRVNEATAVLYARHVLA YLFRVNEATAVLYARHVLASLLAEWPSHVP R V N A R H 3 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 11 0 1205.6404 O43149 O43149 2610 2620 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.00019872 143.24 By MS/MS 2 0.816 1 1 1 3 379960 379960 0 14990 191 15848 38350;38351;38352 30697;30698 30697 2 77649 0 VNEFGESYEEK VYLYQRWLYPVDKRRVNEFGESYEEKATRA DKRRVNEFGESYEEKATRAPHTD_______ R V N E K A 0 0 1 0 0 0 4 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1329.5725 Q96KA5 Q96KA5 520 530 CLPTM1L Cleft lip and palate transmembrane protein 1-like protein yes yes 2 0.00018375 144.55 By MS/MS 1.5 0.5 1 1 2 360210 360210 0 14991 2184 15849 38353;38354 30699 30699 1 98734 0 VNEISVEVDSDPR TRAKKKMVVMHPMPRVNEISVEVDSDPRAA PRVNEISVEVDSDPRAAYFRQAENGMYIRM R V N P R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 1 2 0 0 0 3 0 0 13 0 1457.6998 P27708 P27708 2188 2200 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 6.8104E-08 248.19 By MS/MS 1.5 0.5 1 1 2 2683200 2683200 0 14992 745 15850 38355;38356 30700 30700 1 805850 0 VNEIVETNRPDSK SRFIAAGRLHCKIDKVNEIVETNRPDSKNW DKVNEIVETNRPDSKNWQYQETIKKGDLLL K V N S K N 0 1 2 1 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 2 0 0 13 1 1499.758 Q15008 Q15008 350 362 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2;3 2.5442E-18 223.77 By MS/MS 7 0 2 2 2235800 2235800 0 14993 1471 15851 38357;38358 30701;30702 30702 2 35098 0 VNEMIVTGQYGR DPVEETRHHAEVVKKVNEMIVTGQYGRLFA VKKVNEMIVTGQYGRLFAVVHFASRQWKVT K V N G R L 0 1 1 0 0 1 1 2 0 1 0 0 1 0 0 0 1 0 1 2 0 0 12 0 1365.6711 Q7Z2W9 Q7Z2W9 83 94 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 2.3513E-12 225.93 By MS/MS 9 0 1 1 677060 677060 0 14994 1779 15852 38359 30703 30703 936 1 13325 0 VNFGTDFLTAIK KCRHPTGGSFIRPNKVNFGTDFLTAIKNRY PNKVNFGTDFLTAIKNRYVLEDGPEEDRKE K V N I K N 1 0 1 1 0 0 0 1 0 1 1 1 0 2 0 0 2 0 0 1 0 0 12 0 1324.7027 Q15813 Q15813 75 86 TBCE Tubulin-specific chaperone E yes yes 2 0.039392 77.288 By MS/MS 6 0 1 1 613990 613990 0 14995 1535 15853 38360 30704 30704 0 4220.7 0 VNFGTLLSSQK ______________________________ SFKRVNFGTLLSSQKEAEELLPALKEFLSN R V N Q K E 0 0 1 0 0 1 0 1 0 0 2 1 0 1 0 2 1 0 0 1 0 0 11 0 1192.6452 Q14674 Q14674 7 17 ESPL1 Separin yes yes 2 0.00074317 126.71 By MS/MS 2 0 1 1 82532 82532 0 14996 1449 15854 38361 30705 30705 1 27916 0 VNFPENGFLSPDK YRRPYEKGRLIIEFKVNFPENGFLSPDKLS FKVNFPENGFLSPDKLSLLEKLLPERKEVE K V N D K L 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 1 0 0 0 1 0 0 13 0 1462.7092 P31689 P31689 326 338 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.0065834 98.898 By MS/MS 6.5 0.5 1 1 2 1367700 1367700 0 14997 787 15855 38362;38363 30706;30707 30706 2 11866 0 VNFSEEGETEEDDQDSSHSSVTTVK PLRYPRYEATSVQQKVNFSEEGETEEDDQD EDDQDSSHSSVTTVKARSRDSDESGDKTTR K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 Q5JTV8 Q5JTV8 212 236 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 3 8.7386E-08 125.77 By MS/MS 6 0 1 1 1418400 1418400 0 14998 1611 15856 38364 30708 30708 1 9750.7 0 VNFTVDQIR ______________________________ ______________________________ M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 1.4895E-10 213.53 By MS/MS 4.6 2.06 1 1 1 1 1 5 53735000 53735000 0 14999 602 15857 38365;38366;38367;38368;38369 30709;30710;30711;30712 30710 4 4265400 0 VNGRPLEMIEPR ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQ LIKVNGRPLEMIEPRTLQYKLLEPVLLLGK K V N P R T 0 2 1 0 0 0 2 1 0 1 1 0 1 0 2 0 0 0 0 1 0 0 12 1 1409.7449 P62249 P62249 34 45 RPS16 40S ribosomal protein S16 yes yes 3 0.016213 117.23 By MS/MS 9.67 0.471 1 2 3 6761200 6761200 0 15000 1145 15858;15859 38370;38371;38372 30713;30714 30714 648 2 358930 0 VNGVDDAANFR RDFSRYNYLSLDSAKVNGVDDAANFRTVRN DSAKVNGVDDAANFRTVRNAMQIVGFMDHE K V N F R T 2 1 2 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 11 0 1176.5523 O43795 O43795 242 252 MYO1B Unconventional myosin-Ib yes yes 2 0.0027619 109.83 By MS/MS 3.5 0.5 1 1 2 1409500 1409500 0 15001 235 15860 38373;38374 30715 30715 1 64955 0 VNIDDLVK LTSLAAALDENKDGKVNIDDLVKVIELVDK DENKDGKVNIDDLVKVIELVDKEDVHISTS K V N V K V 0 0 1 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 914.5073 O95202 O95202 683 690 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.0030613 134.48 By MS/MS 5 0 1 1 914110 914110 0 15002 394 15861 38375 30716 30716 1 9168.1 0 VNIFGVESGKK SPDSQYLATGTHVGKVNIFGVESGKKEYSL HVGKVNIFGVESGKKEYSLDTRGKFILSIA K V N K K E 0 0 1 0 0 0 1 2 0 1 0 2 0 1 0 1 0 0 0 2 0 0 11 1 1176.6503 Q9GZS3 Q9GZS3 130 140 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2;3 0.03067 93.442 By MS/MS 8 0 2 2 2989000 2989000 0 15003 2397 15862 38376;38377 30717;30718 30718 2 37736 0 VNIGMIDQSR RVLGLLGALDPYKHKVNIGMIDQSRDASAV PYKHKVNIGMIDQSRDASAVSLSESKSSQD K V N S R D 0 1 1 1 0 1 0 1 0 2 0 0 1 0 0 1 0 0 0 1 0 0 10 0 1131.5706 P42345 P42345 901 910 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00033114 138.22 By MS/MS 2 0 1 1 497860 497860 0 15004 879 15863 38378 30719 30719 1 168400 0 VNIIPLIAK LKSLDLLTMKNLDSKVNIIPLIAKADTISK KNLDSKVNIIPLIAKADTISKNDLQTFKNK K V N A K A 1 0 1 0 0 0 0 0 0 3 1 1 0 0 1 0 0 0 0 1 0 0 9 0 979.643 Q6ZU15;Q16181 Q6ZU15 187 195 SEPT14;SEPT7 Septin-14;Septin-7 yes no 2 0.011095 98.523 By MS/MS 6.33 0.471 2 1 3 3592200 3592200 0 15005 1542 15864 38379;38380;38381 30720;30721;30722 30720 3 26360 0 VNIKPQVDR VEIDVKWLNENAVEKVNIKPQVDRYRLKNG ENAVEKVNIKPQVDRYRLKNGRRIILLAEG K V N D R Y 0 1 1 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1067.6087 P23526 P23526 319 327 AHCY Adenosylhomocysteinase yes yes 2 0.038847 104.2 By MS/MS 7 0 1 1 3329000 3329000 0 15006 706 15865 38382 30723;30724 30723 2 52259 0 VNILFDFVK VLTLSDDLERTIEERVNILFDFVKKKKEEG RTIEERVNILFDFVKKKKEEGVIDSSDKEI R V N V K K 0 0 1 1 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 2 0 0 9 0 1093.6172 P55010 P55010 240 248 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.010816 99.013 By MS/MS 6 0 1 1 584980 584980 0 15007 1050 15866 38383 30725 30725 1 4021.3 0 VNIVPVIAK LKPLDVAFMKAIHNKVNIVPVIAKADTLTL KAIHNKVNIVPVIAKADTLTLKERERLKKR K V N A K A 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 3 0 0 9 0 951.6117 Q15019 Q15019 175 183 SEPT2 Septin-2 yes yes 2 0.022722 87.754 By MS/MS 7 0 1 1 2108900 2108900 0 15008 1472 15867 38384 30726 30726 1 33105 0 VNKDDIQK EEAIVELVENGKKVKVNKDDIQKMNPPKFS ENGKKVKVNKDDIQKMNPPKFSKVEDMAEL K V N Q K M 0 0 1 2 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 8 1 958.50836 P35579 P35579 67 74 MYH9 Myosin-9 yes yes 2;3 0.0016897 153.04 By MS/MS By matching 2 0 3 2 1 536350 524990 11361 15009 824 15868 38385;38386;38387 30727;30728 30727 2 177570 16067 VNLAIWDTAGQER QASFLTKKLNIGGKRVNLAIWDTAGQERFH KRVNLAIWDTAGQERFHALGPIYYRDSNGA R V N E R F 2 1 1 1 0 1 1 1 0 1 1 0 0 0 0 0 1 1 0 1 0 0 13 0 1471.7419 Q9UL25 Q9UL25 68 80 RAB21 Ras-related protein Rab-21 yes yes 2 0.00019262 187.78 By MS/MS 8.5 0.5 1 1 2 726890 726890 0 15010 2769 15869 38388;38389 30729 30729 1 10555 0 VNLEESSGVENSPAGAR YQALVHDVLDFHLNRVNLEESSGVENSPAG LEESSGVENSPAGARPKRKNKKSYDLTPVD R V N A R P 2 1 2 0 0 0 3 2 0 0 1 0 0 0 1 3 0 0 0 2 0 0 17 0 1714.8122 Q8WVM8 Q8WVM8 292 308 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 4.7969E-24 272.77 By MS/MS 5 0 1 1 1614400 1614400 0 15011 2028 15870 38390 30730 30730 1 16191 0 VNLEESSGVENSPAGARPK YQALVHDVLDFHLNRVNLEESSGVENSPAG ESSGVENSPAGARPKRKNKKSYDLTPVDKF R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 2;3 1.5077E-11 238.88 By MS/MS 5.33 0.471 2 1 3 6576900 6576900 0 15012 2028 15871 38391;38392;38393 30731;30732 30732 2 63333 0 VNLFTDFDK KNADGYKLDKQHTFRVNLFTDFDKYMTISD KQHTFRVNLFTDFDKYMTISDEWDIPEKQP R V N D K Y 0 0 1 2 0 0 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 9 0 1097.5393 P55884 P55884 263 271 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 2.5078E-10 205.12 By MS/MS 4 1.87 1 1 1 2 1 1 1 8 6205300 6205300 0 15013 1065 15872 38394;38395;38396;38397;38398;38399;38400;38401 30733;30734;30735 30735 3 441480 0 VNLGAFR VAVVIDPTRTISAGKVNLGAFRTYPKGYKP TRTISAGKVNLGAFRTYPKGYKPPDEGPSE K V N F R T 1 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 775.43407 Q92905 Q92905 181 187 COPS5 COP9 signalosome complex subunit 5 yes yes 2 0.039466 97.596 By MS/MS 7.5 0.5 1 1 2 819520 819520 0 15014 2078 15873 38402;38403 30736 30736 1 12269 0 VNLNQIPLGR IQSTGIWGIGVATQKVNLNQIPLGRDMHSL VATQKVNLNQIPLGRDMHSLVMRNDGALYH K V N G R D 0 1 2 0 0 1 0 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1122.6509 Q5W111 Q5W111 86 95 SPRYD7 SPRY domain-containing protein 7 yes yes 2 0.00052732 132.76 By MS/MS 9 0 1 1 524660 524660 0 15015 1662 15874 38404 30737 30737 1 10325 0 VNLNVLR ______________________________ AAHLSYGRVNLNVLREAVRRELREFLDKCA R V N L R E 0 1 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 7 0 826.50249 Q96AX1 Q96AX1 10 16 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2 0.018013 114.59 By MS/MS 5 0 1 1 1388500 1388500 0 15016 2109 15875 38405 30738 30738 1 13926 0 VNNSSLIGVGYTQTLRPGVK AAKYQLDPTASISAKVNNSSLIGVGYTQTL LIGVGYTQTLRPGVKLTLSALVDGKSINAG K V N V K L 0 1 2 0 0 1 0 3 0 1 2 1 0 0 1 2 2 0 1 3 0 0 20 1 2102.1484 P45880 P45880 248 267 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 3 0.0034417 86.455 By MS/MS 8 0 1 1 3051400 3051400 0 15017 903 15876 38406 30739 30739 1 38523 0 VNPALAELNLR GLTEARCKDISSALRVNPALAELNLRSNEL SALRVNPALAELNLRSNELGDVGVHCVLQG R V N L R S 2 1 2 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1208.6877 P13489 P13489 54 64 RNH1 Ribonuclease inhibitor yes yes 2 0.00078779 122.69 By MS/MS 7.75 1.48 1 1 1 1 4 15113000 15113000 0 15018 601 15877 38407;38408;38409;38410 30740;30741;30742 30742 3 244930 0 VNPFRPGDSEPPPAPGAQR APQKKFGPVVAPKPKVNPFRPGDSEPPPAP RPGDSEPPPAPGAQRAQMGRVGEIPPPPPE K V N Q R A 2 2 1 1 0 1 1 2 0 0 0 0 0 1 6 1 0 0 0 1 0 0 19 1 1987.9864 Q15942 Q15942 36 54 ZYX Zyxin yes yes 3 0.0078941 81.651 By MS/MS 5 0 1 1 2590600 2590600 0 15019 1541 15878 38411 30743 30743 1 25983 0 VNPIQGLASK KEWVAKQTKRMLDMKVNPIQGLASKWDYEK MLDMKVNPIQGLASKWDYEKNEWKK_____ K V N S K W 1 0 1 0 0 1 0 1 0 1 1 1 0 0 1 1 0 0 0 1 0 0 10 0 1025.5869 P13073 P13073 150 159 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.050488 72.096 By MS/MS 10 0 1 1 3395900 3395900 0 15020 598 15879 38412 30744 30744 1 183020 0 VNPNTALTLLEK TYLADYGQPASKYLRVNPNTALTLLEKMKD YLRVNPNTALTLLEKMKDTSKKNNIFAQFR R V N E K M 1 0 2 0 0 0 1 0 0 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1311.7398 Q8TAG9 Q8TAG9 750 761 EXOC6 Exocyst complex component 6 yes yes 2 0.017263 88.155 By MS/MS 4 0 1 1 1787000 1787000 0 15021 1975 15880 38413 30745 30745 1 168170 0 VNPVTALTLLEK TYLADYGQPNCKYLRVNPVTALTLLEKMKD YLRVNPVTALTLLEKMKDTSRKNNMFAQFR R V N E K M 1 0 1 0 0 0 1 0 0 0 3 1 0 0 1 0 2 0 0 2 0 0 12 0 1296.7653 Q9Y2D4 Q9Y2D4 759 770 EXOC6B Exocyst complex component 6B yes yes 2 0.015491 87.641 By MS/MS 4 0 1 1 220230 220230 0 15022 2826 15881 38414 30746 30746 1 20725 0 VNQAIWLLCTGAR GTVRRQAVDVSPLRRVNQAIWLLCTGAREA RRVNQAIWLLCTGAREAAFRNIKTIAECLA R V N A R E 2 1 1 0 1 1 0 1 0 1 2 0 0 0 0 0 1 1 0 1 0 0 13 0 1500.7871 P46782 P46782 147 159 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 2.4629E-11 227.36 By MS/MS 9.33 0.471 2 1 3 5101600 5101600 0 15023 919 15882 38415;38416;38417 30747;30748;30749;30750;30751 30747 5 100400 0 VNQIGSVTESLQACK AKAVNEKSCNCLLLKVNQIGSVTESLQACK VNQIGSVTESLQACKLAQANGWGVMVSHRS K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 6.4633E-24 329.67 By MS/MS 6.5 0.5 1 1 2 12488000 12488000 0 15024 500 15883 38418;38419 30752 30752 1 88463 0 VNTDLGNDLYFVK EEPIPETRIEVEIPKVNTDLGNDLYFVKLP PKVNTDLGNDLYFVKLPNFLSVEPRPFDPQ K V N V K L 0 0 2 2 0 0 0 1 0 0 2 1 0 1 0 0 1 0 1 2 0 0 13 0 1496.7511 Q8WVC0 Q8WVC0 365 377 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.00024457 158.06 By MS/MS 4.5 0.5 1 1 2 434790 434790 0 15025 2023 15884 38420;38421 30753 30753 1 33035 0 VNTLIRPDGEK IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV DVAKVNTLIRPDGEKKAYVRLAPDYDALDV K V N E K K 0 1 1 1 0 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 1 1240.6776 P62750 P62750 124 134 RPL23A 60S ribosomal protein L23a yes yes 2 1.7208E-06 199.03 By MS/MS 9 0 1 1 1852100 1852100 0 15026 1168 15885 38422 30754 30754 1 36450 0 VNTLIRPDGEKK IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV VAKVNTLIRPDGEKKAYVRLAPDYDALDVA K V N K K A 0 1 1 1 0 0 1 1 0 1 1 2 0 0 1 0 1 0 0 1 0 0 12 2 1368.7725 P62750 P62750 124 135 RPL23A 60S ribosomal protein L23a yes yes 3 0.049797 67.08 By MS/MS By matching 9 0 2 1 1 2415500 2370800 44778 15027 1168 15886 38423;38424 30755 30755 1 46657 102110 VNTPTTTVYR MFKYNKFKCRILNEKVNTPTTTVYRCGPLI ILNEKVNTPTTTVYRCGPLIDLCRGPHVRH K V N Y R C 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 1 2 0 0 10 0 1150.5982 P26639 P26639 244 253 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 0.01001 94.309 By MS/MS 4.5 0.5 1 1 2 961130 961130 0 15028 734 15887 38425;38426 30756 30756 1 43702 0 VNTQSSSNSTLPER DSQEKDATCELPLQKVNTQSSSNSTLPERL KVNTQSSSNSTLPERLKASENSESEYSRSE K V N E R L 0 1 2 0 0 1 1 0 0 0 1 0 0 0 1 4 2 0 0 1 0 0 14 0 1518.7274 Q8IXW5 Q8IXW5 295 308 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 1.4446E-16 255.24 By MS/MS 5 0 1 1 1063600 1063600 0 15029 1879 15888 38427 30757 30757 1 10668 0 VNVGAGSHPNK MVSWGGVSIPNSPFRVNVGAGSHPNKVKVY SPFRVNVGAGSHPNKVKVYGPGVAKTGLKA R V N N K V 1 0 2 0 0 0 0 2 1 0 0 1 0 0 1 1 0 0 0 2 0 0 11 0 1078.552 P21333 P21333 761 771 FLNA Filamin-A yes yes 2 8.6106E-05 153.1 By MS/MS 2.5 1.12 1 1 1 1 4 1729400 1729400 0 15030 677 15889 38428;38429;38430;38431 30758;30759;30760 30758 3 421420 0 VNVTGIYR FAHNDLVDKVQPGDRVNVTGIYRAVPIRVN KVQPGDRVNVTGIYRAVPIRVNPRVSNVKS R V N Y R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 2 0 0 8 0 920.50797 P33991 P33991 388 395 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.025446 93.143 By MS/MS 4 0 1 1 1107200 1107200 0 15031 806 15890 38432 30761 30761 1 104200 0 VNWATTPSSQK LAAMNGRKILGKEVKVNWATTPSSQKKDTS KEVKVNWATTPSSQKKDTSNHFHVFVGDLS K V N Q K K 1 0 1 0 0 1 0 0 0 0 0 1 0 0 1 2 2 1 0 1 0 0 11 0 1217.6041 Q01085;P31483 Q01085 80 90 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 yes no 2 0.037911 76.282 By MS/MS 7 0 1 1 451340 451340 0 15032 1266 15891 38433 30762 30762 1 7085.3 0 VNYIGTK ASPPPSSNNKELFYRVNYIGTKNVIETCKE NNKELFYRVNYIGTKNVIETCKEAGVQKLI R V N T K N 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 7 0 793.4334 Q15738 Q15738 120 126 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.034089 101.64 By MS/MS 7 0 1 1 2443300 2443300 0 15033 1526 15892 38434 30763 30763 1 38356 0 VPAGNWVLIEGVDQPIVK RLWISVARYHIEVNRVPAGNWVLIEGVDQP GNWVLIEGVDQPIVKTATITEPRGNEEAQI R V P V K T 1 0 1 1 0 1 1 2 0 2 1 1 0 0 2 0 0 1 0 4 0 0 18 0 1933.0673 Q15029 Q15029 544 561 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0010261 111.79 By MS/MS 4 0 1 1 59714 59714 0 15034 1476 15893 38435 30764 30764 1 5619.5 0 VPAINVNDSVTK GVHNLYKMMANGILKVPAINVNDSVTKSKF ILKVPAINVNDSVTKSKFDNLYGCRESLID K V P T K S 1 0 2 1 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 3 0 0 12 0 1255.6772 P23526 P23526 175 186 AHCY Adenosylhomocysteinase yes yes 2 0.00041447 136.5 By MS/MS 7.5 0.5 1 1 2 6964200 6964200 0 15035 706 15894 38436;38437 30765;30766 30765 1 108190 0 VPALLENQVEER QTVTGLKKDLSGVQKVPALLENQVEERTCS VQKVPALLENQVEERTCSDSEDIGSSECSD K V P E R T 1 1 1 0 0 1 3 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 12 0 1395.7358 Q9BRS2 Q9BRS2 482 493 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 2 0.0014008 129 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 3069400 2918700 150640 15036 2299 15895 38438;38439;38440 30767;30768 30768 2 27360 126510 VPAPFKPITR INRSMDPKNMFAIWRVPAPFKPITRKSVGH FAIWRVPAPFKPITRKSVGHRMGGGKGAID R V P T R K 1 1 0 0 0 0 0 0 0 1 0 1 0 1 3 0 1 0 0 1 0 0 10 1 1124.6706 Q9NX20 Q9NX20 124 133 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 3 0.032478 97.565 By MS/MS 8 0 1 1 1987700 1987700 0 15037 2617 15896 38441 30769 30769 1 25095 0 VPATNLILGEGR NFHGGHFEIHFNQVRVPATNLILGEGRGFE QVRVPATNLILGEGRGFEISQGRLGPGRIH R V P G R G 1 1 1 0 0 0 1 2 0 1 2 0 0 0 1 0 1 0 0 1 0 0 12 0 1238.6983 Q709F0 Q709F0 608 619 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 3.6539E-05 171.67 By MS/MS 4.5 0.5 1 1 2 4235500 4235500 0 15038 1748 15897 38442;38443 30770;30771 30771 2 195220 0 VPAVPPGVR ALLERELQRRKEQLRVPAVPPGVRIKEEPV RKEQLRVPAVPPGVRIKEEPVSEEGEEDEE R V P V R I 1 1 0 0 0 0 0 1 0 0 0 0 0 0 3 0 0 0 0 3 0 0 9 0 890.53379 Q9NVU0 Q9NVU0 488 496 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.022088 88.029 By MS/MS 5.5 0.5 1 1 2 1187500 1187500 0 15039 2603 15898 38444;38445 30772 30772 1 10840 0 VPDCFQR RIDELQVVKTGGTPKVPDCFQRTPKKLCIP VKTGGTPKVPDCFQRTPKKLCIPEKTEILA K V P Q R T 0 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 7 0 920.41744 O95071 O95071 727 733 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.043702 94.407 By MS/MS 2.5 1.12 1 1 1 1 4 1688700 1688700 0 15040 384 15899 38446;38447;38448;38449 30773;30774 30774 2 298580 0 VPDHHPC ILRVDNIIKAAPRKRVPDHHPC________ IKAAPRKRVPDHHPC_______________ R V P P C - 0 0 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 1 0 0 7 0 860.35992 P78371 P78371 529 535 CCT2 T-complex protein 1 subunit beta yes yes 2 0.016877 117.54 By MS/MS By matching 6.33 0.471 2 1 2 1 5030300 5015700 14515 15041 1222 15900 38450;38451;38452 30775 30775 1 35683 14874 VPDNYGDEIAIELR GDLAPLWKGIGHVIKVPDNYGDEIAIELRS KVPDNYGDEIAIELRSSVGAPVEVTHNFQV K V P L R S 1 1 1 2 0 0 2 1 0 2 1 0 0 0 1 0 0 0 1 1 0 0 14 0 1602.789 Q92900 Q92900 394 407 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0037028 116.9 By MS/MS 3 0 1 1 147860 147860 0 15042 2077 15901 38453 30776 30776 1 2705.4 0 VPDVLVADPPIAR RFRIDELEPRRPRYRVPDVLVADPPIARLS YRVPDVLVADPPIARLSVSGRDENSVELTM R V P A R L 2 1 0 2 0 0 0 0 0 1 1 0 0 0 3 0 0 0 0 3 0 0 13 0 1360.7715 Q14697 Q14697 115 127 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0031325 109.16 By MS/MS 4 0 1 1 766750 766750 0 15043 1454 15902 38454 30777 30777 1 72156 0 VPEEDLKR ATQYFADRDMFCAGRVPEEDLKRTMMACGG DMFCAGRVPEEDLKRTMMACGGSIQTSVNA R V P K R T 0 1 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 8 1 984.52401 Q99832 Q99832 314 321 CCT7 T-complex protein 1 subunit eta yes yes 2 0.023084 117.4 By MS/MS 6 0 1 1 11139000 11139000 0 15044 2270 15903 38455 30778 30778 1 76574 0 VPEEEKDTNVQVLMVLGAGR YSQYQQAIYKCLLDRVPEEEKDTNVQVLMV KDTNVQVLMVLGAGRGPLVNASLRAAKQAD R V P G R G 1 1 1 1 0 1 3 2 0 0 2 1 1 0 1 0 1 0 0 4 0 0 20 1 2183.1256 O14744 O14744 349 368 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.0060034 88.565 By matching By MS/MS 5 0 2 1 1 371760 277080 94678 15045 137 15904 38456;38457 30779 30779 82 1 2779 79509 VPELFANR DLYTLGCGEQGQLGRVPELFANRGGRQGLE EQGQLGRVPELFANRGGRQGLERLLVPKCV R V P N R G 1 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 8 0 944.50797 P18754 P18754 207 214 RCC1 Regulator of chromosome condensation yes yes 2 0.021009 98.523 By MS/MS 7 0 1 1 876040 876040 0 15046 655 15905 38458 30780 30780 1 13752 0 VPEWVDTVK VRALAAFLKKSGKLKVPEWVDTVKLAKHKE KSGKLKVPEWVDTVKLAKHKELAPYDENWF K V P V K L 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 3 0 0 9 0 1071.5601 P39019 P39019 30 38 RPS19 40S ribosomal protein S19 yes yes 2 0.0022342 118.33 By MS/MS 10 0 1 1 9506200 9506200 0 15047 853 15906 38459 30781 30781 1 512350 0 VPEWVDTVKLAK VRALAAFLKKSGKLKVPEWVDTVKLAKHKE KLKVPEWVDTVKLAKHKELAPYDENWFYTR K V P A K H 1 0 0 1 0 0 1 0 0 0 1 2 0 0 1 0 1 1 0 3 0 0 12 1 1383.7762 P39019 P39019 30 41 RPS19 40S ribosomal protein S19 yes yes 3 0.050445 62.799 By MS/MS 10 0 1 1 148850 148850 0 15048 853 15907 38460 30782 30782 1 8022.6 0 VPFCPMVGSEVYSTEIK KTALALAIAQELGSKVPFCPMVGSEVYSTE FCPMVGSEVYSTEIKKTEVLMENFRRAIGL K V P I K K 0 0 0 0 1 0 2 1 0 1 0 1 1 1 2 2 1 0 1 3 0 0 17 0 1941.9216 Q9Y265 Q9Y265 91 107 RUVBL1 RuvB-like 1 yes yes 2 0.00053649 155.86 By MS/MS 6 0 1 1 2245400 2245400 0 15049 2815 15908 38461 30783 30783 1 15435 0 VPFLPGDSDLDQLTR DMWAVGCILAELLLRVPFLPGDSDLDQLTR VPFLPGDSDLDQLTRIFETLGTPTEEQWPD R V P T R I 0 1 0 3 0 1 0 1 0 0 3 0 0 1 2 1 1 0 0 1 0 0 15 0 1671.8468 P50613 P50613 210 224 CDK7 Cyclin-dependent kinase 7 yes yes 2 0.0003287 137.95 By MS/MS 7 0 1 1 0 0 0 15050 978 15909 38462 30784 30784 1 0 0 VPFLVLECPNLK ______________________________ LYRVPFLVLECPNLKLKKPPWLHMPSAMTV R V P L K L 0 0 1 0 1 0 1 0 0 0 3 1 0 1 2 0 0 0 0 2 0 0 12 0 1427.7847 Q9NRP0 Q9NRP0 7 18 OSTC Oligosaccharyltransferase complex subunit OSTC yes yes 2 0.00071804 130.41 By MS/MS 7.25 3.11 1 1 1 1 4 1382200 1382200 0 15051 2557 15910 38463;38464;38465;38466 30785;30786;30787 30787 3 79715 0 VPGQEETVK ALSMIIKSLKNLASRVPGQEETVKNLEIFR KNLASRVPGQEETVKNLEIFRLKMILRLLQ R V P V K N 0 0 0 0 0 1 2 1 0 0 0 1 0 0 1 0 1 0 0 2 0 0 9 0 985.50803 Q93008 Q93008 321 329 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.010114 100.25 By MS/MS 2.5 1.12 1 1 1 1 4 1897300 1897300 0 15052 2085 15911 38467;38468;38469;38470 30788 30788 1 469210 0 VPIDGPPIDIGR PMHGVPCPAGAAVCKVPIDGPPIDIGRVAG VCKVPIDGPPIDIGRVAGPPILNPIANEIY K V P G R V 0 1 0 2 0 0 0 2 0 3 0 0 0 0 3 0 0 0 0 1 0 0 12 0 1247.6874 P11717 P11717 1715 1726 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0063686 99.568 By MS/MS 1.5 0.5 1 1 2 443810 443810 0 15053 583 15912 38471;38472 30789;30790 30790 2 136230 0 VPINDVLAEDK AAKVRLKMPPVLEERVPINDVLAEDKILEG LEERVPINDVLAEDKILEGTETTKYVFTDI R V P D K I 1 0 1 2 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1211.6398 P82650 P82650 136 146 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.00024361 139.31 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 13884000 13633000 251240 15054 1229 15913 38473;38474;38475 30791;30792 30792 2 212850 452470 VPINDVLAEDKILEGTETTK AAKVRLKMPPVLEERVPINDVLAEDKILEG VLAEDKILEGTETTKYVFTDISYSIPHRER R V P T K Y 1 0 1 2 0 0 3 1 0 2 2 2 0 0 1 0 3 0 0 2 0 0 20 1 2184.1525 P82650 P82650 136 155 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 1.6431E-05 165.49 By MS/MS 7 0 1 1 3967900 3967900 0 15055 1229 15914 38476 30793 30793 1 62289 0 VPLAGEGR LSQNRGTVIVERWWKVPLAGEGRKPRLHRR IVERWWKVPLAGEGRKPRLHRRHRVYKLVE K V P G R K 1 1 0 0 0 0 1 2 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 797.43955 Q9BYD2 Q9BYD2 62 69 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.015673 104.45 By MS/MS By matching 7.25 0.829 1 1 2 1 3 3473000 3231800 241150 15056 2369 15915 38477;38478;38479;38480 30794 30794 1 40801 351640 VPLAIVNK TLSKEVRNLKWLGFRVPLAIVNKAHQANQL LKWLGFRVPLAIVNKAHQANQLYPFAISLI R V P N K A 1 0 1 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 8 0 852.54329 Q14204 Q14204 760 767 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0055431 122.98 By MS/MS 2.5 1.12 1 1 1 1 4 2169800 2169800 0 15057 1433 15916 38481;38482;38483;38484 30795;30796 30796 2 506930 0 VPLAPITDPQQLQLSPLK ______________________________ APITDPQQLQLSPLKGLSLVDKENTPPALS R V P L K G 1 0 0 1 0 3 0 0 0 1 4 1 0 0 4 1 1 0 0 1 0 0 18 0 1957.1248 P31350 P31350 6 23 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 2 0.00018542 141.34 By MS/MS 7 0 1 1 147840 147840 0 15058 786 15917 38485 30797;30798 30797 2 2320.9 0 VPLEQLCLR YNHQLLKQQLPEIQRVPLEQLCLRIKILEM LPEIQRVPLEQLCLRIKILEMFSAHNLQSV R V P L R I 0 1 0 0 1 1 1 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 9 0 1126.6169 Q6P158 Q6P158 997 1005 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.0213 88.37 By MS/MS 3 0 1 1 645660 645660 0 15059 1697 15918 38486 30799 30799 1 11814 0 VPLFSPNFSEK AEFIMLNHFSQRYAKVPLFSPNFSEKVGVA RYAKVPLFSPNFSEKVGVAFDHMKVCFGDF K V P E K V 0 0 1 0 0 0 1 0 0 0 1 1 0 2 2 2 0 0 0 1 0 0 11 0 1263.6499 Q9BQ52 Q9BQ52 732 742 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.00088116 123.96 By MS/MS 4 0 1 1 1482000 1482000 0 15060 2283 15919 38487 30800 30800 1 139470 0 VPLIGSLPEAR WHRRTEELPLGRELRVPLIGSLPEARLRRV RELRVPLIGSLPEARLRRVVGQLDPQRLWS R V P A R L 1 1 0 0 0 0 1 1 0 1 2 0 0 0 2 1 0 0 0 1 0 0 11 0 1150.671 Q9NXS2 Q9NXS2 70 80 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.00103 120.99 By MS/MS 7 0 1 1 670600 670600 0 15061 2628 15920 38488 30801 30801 1 10527 0 VPLILVGNK KPMRDQIVRVKRYEKVPLILVGNKVDLEPE VKRYEKVPLILVGNKVDLEPEREVMSSEGR K V P N K V 0 0 1 0 0 0 0 1 0 1 2 1 0 0 1 0 0 0 0 2 0 0 9 0 951.6117 Q9Y3L5 Q9Y3L5 109 117 RAP2C Ras-related protein Rap-2c yes yes 2 0.0092908 101.69 By MS/MS 5 0 1 1 2580800 2580800 0 15062 2880 15921 38489 30802 30802 1 25884 0 VPLLAEYR AQRVIHLAGQWEKHRVPLLAEYRHLRKLQD GQWEKHRVPLLAEYRHLRKLQDCRELESSR R V P Y R H 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 8 0 959.54402 O60826 O60826 426 433 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.04321 85.064 By MS/MS 5 0 1 1 721710 721710 0 15063 280 15922 38490 30803 30803 1 7238.4 0 VPLPSLSPTMQAGTIAR GSPGRRYYSLPPHQKVPLPSLSPTMQAGTI LPSLSPTMQAGTIARWEKKEGDKINEGDLI K V P A R W 2 1 0 0 0 1 0 1 0 1 2 0 1 0 3 2 2 0 0 1 0 0 17 0 1737.9447 P10515 P10515 94 110 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.00011467 186.51 By MS/MS 5 0 1 1 898620 898620 0 15064 561 15923 38491 30804 30804 1 9012.7 0 VPLSTVLLDPTR GTHNCRNRNSFKLSRVPLSTVLLDPTRSCT LSRVPLSTVLLDPTRSCTQPRGAFADGHVL R V P T R S 0 1 0 1 0 0 0 0 0 0 3 0 0 0 2 1 2 0 0 2 0 0 12 0 1309.7606 Q9Y2I1 Q9Y2I1 946 957 NISCH Nischarin yes yes 2 7.3188E-05 160.18 By MS/MS 1.5 0.5 1 1 2 576950 576950 0 15065 2829 15924 38492;38493 30805;30806;30807 30807 3 185680 0 VPLVAPEDLR NHIHTGHHSSMFWMRVPLVAPEDLRDDIIE MFWMRVPLVAPEDLRDDIIENAPTTHTEEY R V P L R D 1 1 0 1 0 0 1 0 0 0 2 0 0 0 2 0 0 0 0 2 0 0 10 0 1107.6288 O14744 O14744 155 164 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0072699 88.948 By MS/MS By MS/MS 5 0 2 1 1 6502700 4538300 1964500 15066 137 15925 38494;38495 30808;30809 30809 2 45516 1649800 VPPAINQFTQALDR IRLQRQRAILYKRLKVPPAINQFTQALDRQ KVPPAINQFTQALDRQTATQLLKLAHKYRP K V P D R Q 2 1 1 1 0 2 0 0 0 1 1 0 0 1 2 0 1 0 0 1 0 0 14 0 1568.8311 P62424 P62424 76 89 RPL7A 60S ribosomal protein L7a yes yes 2 9.5558E-05 179.6 By MS/MS 8 0 1 1 754490 754490 0 15067 1160 15926 38496 30810 30810 1 9525.3 0 VPPTAAVAQVFER AGRPSGSTPLGPLARVPPTAAVAQVFERGN ARVPPTAAVAQVFERGNMNSEPEEEDGGLE R V P E R G 3 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 1 0 0 3 0 0 13 0 1383.751 Q8IVW6 Q8IVW6 72 84 ARID3B AT-rich interactive domain-containing protein 3B yes yes 2 0.0046677 104.59 By MS/MS 5 0 1 1 1260400 1260400 0 15068 1864 15927 38497 30811 30811 1 12641 0 VPPVIVLENQGLR VLIMLDNQKLVPQPRVPPVIVLENQGLRWV PRVPPVIVLENQGLRWVPKDKNLVMWRDWE R V P L R W 0 1 1 0 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 3 0 0 13 0 1432.8402 Q9Y3B6 Q9Y3B6 127 139 EMC9 ER membrane protein complex subunit 9 yes yes 2 0.0012001 122.51 By MS/MS 8.5 0.5 1 1 2 1543500 1543500 0 15069 2865 15928 38498;38499 30812;30813;30814 30813 2 24025 0 VPPVQVSPLIK ______________________________ ______________________________ M V P I K L 0 0 0 0 0 1 0 0 0 1 1 1 0 0 3 1 0 0 0 3 0 0 11 0 1175.7278 P56385 P56385 2 12 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.0094198 92.239 By MS/MS 10 0 1 1 4338300 4338300 0 15070 1072 15929 38500 30815;30816 30815 2 233820 0 VPQFSFSR EPVGLMTGSGVVGVKVPQFSFSRLAGADVV SGVVGVKVPQFSFSRLAGADVVLGVEMTST K V P S R L 0 1 0 0 0 1 0 0 0 0 0 0 0 2 1 2 0 0 0 1 0 0 8 0 966.49232 P27708 P27708 1263 1270 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.020956 98.582 By MS/MS 2 0.816 1 1 1 3 1726200 1726200 0 15071 745 15930 38501;38502;38503 30817 30817 1 504840 0 VPQIEVETHK YEVSISGEWSPWQAKVPQIEVETHKVAAPD PWQAKVPQIEVETHKVAAPDVVVPTLDTVR K V P H K V 0 0 0 0 0 1 2 0 1 1 0 1 0 0 1 0 1 0 0 2 0 0 10 0 1178.6295 Q14204 Q14204 2552 2561 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0012939 114.89 By MS/MS By matching 2 1.07 3 2 1 1 6 1 6694700 6641300 53360 15072 1433 15931 38504;38505;38506;38507;38508;38509;38510 30818;30819;30820;30821 30818 4 1743900 53360 VPSGGYSSINNVQDPQKPEPR DWGWEILQSFSRFTRVPSGGYSSINNVQDP SSINNVQDPQKPEPRDKMESFFLGETLKYL R V P P R D 0 1 2 1 0 2 1 2 0 1 0 1 0 0 4 3 0 0 1 2 0 0 21 1 2268.1135 Q9UKM7 Q9UKM7 633 653 MAN1B1 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase yes yes 3 1.0575E-05 151.41 By MS/MS 4.5 0.5 1 1 2 879730 879730 0 15073 2761 15932 38511;38512 30822 30822 1 64079 0 VPSHAVVAR TRKPVDKFKDCHLARVPSHAVVARSVNGKE DCHLARVPSHAVVARSVNGKEDAIWNLLRQ R V P A R S 2 1 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 3 0 0 9 0 934.53485 P02788 P02788 269 277 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 2 0.0050136 123.98 By MS/MS 1 0 1 1 151660 0 151660 15074 459 15933 38513 30823 30823 1 0 151660 VPSKNQNDPLPGR SIEHFEGTVTKVIPKVPSKNQNDPLPGRIK PKVPSKNQNDPLPGRIKVDFVIPKELPFGD K V P G R I 0 1 2 1 0 1 0 1 0 0 1 1 0 0 3 1 0 0 0 1 0 0 13 1 1420.7423 O75534 O75534 274 286 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.026846 75.483 By MS/MS 4 0 1 1 1269700 1269700 0 15075 333 15934 38514 30824 30824 1 119490 0 VPTANVSVVDLTCR VIPELNGKLTGMAFRVPTANVSVVDLTCRL RVPTANVSVVDLTCRLEKPAKYDDIKKVVK R V P C R L 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 2 0 0 4 0 0 14 0 1529.7872 P04406 P04406 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 2.9275E-09 213.84 By MS/MS By MS/MS 7.33 2.21 1 2 1 1 1 4 2 21409000 21029000 379530 15076 473 15935 38515;38516;38517;38518;38519;38520 30825;30826;30827;30828;30829;30830 30826 6 336140 101610 VPTGLPFIK LIHFFGEEYLEYKKRVPTGLPFIKGVKVDL LEYKKRVPTGLPFIKGVKVDL_________ R V P I K G 0 0 0 0 0 0 0 1 0 1 1 1 0 1 2 0 1 0 0 1 0 0 9 0 970.58515 O60725 O60725 270 278 ICMT Protein-S-isoprenylcysteine O-methyltransferase yes yes 2 0.0093421 101.6 By MS/MS 1.5 0.5 1 1 2 734490 734490 0 15077 273 15936 38521;38522 30831;30832 30832 2 214100 0 VPTTEKPTVTVNFR SVAYANMCRCLMALKVPTTEKPTVTVNFRK KVPTTEKPTVTVNFRKLLLNRCQKEFEKDK K V P F R K 0 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 4 0 0 3 0 0 14 1 1587.8621 Q04637 Q04637 827 840 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0020162 153.74 By MS/MS 2.67 0.943 2 1 3 13661000 13661000 0 15078 1291 15937 38523;38524;38525 30833;30834;30835 30834 3 4364600 0 VPVASPSAHNISSSGGAPDR ESNCEVPRPSTAPQRVPVASPSAHNISSSG PSAHNISSSGGAPDRTNFPRGVSSRSTFHA R V P D R T 3 1 1 1 0 0 0 2 1 1 0 0 0 0 3 5 0 0 0 2 0 0 20 0 1904.9341 Q7KZI7 Q7KZI7 565 584 MARK2 Serine/threonine-protein kinase MARK2 yes yes 3 4.1608E-05 114.58 By MS/MS 4.5 0.5 1 1 2 826140 826140 0 15079 1756 15938 38526;38527 30836 30836 1 33782 0 VPVHDVTDASK NVTYGGHQVPGSPFKVPVHDVTDASKVKCS SPFKVPVHDVTDASKVKCSGPGLSPGMVRA K V P S K V 1 0 0 2 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 3 0 0 11 0 1166.5932 P21333 P21333 1440 1450 FLNA Filamin-A yes yes 2 0.0058328 112.71 By MS/MS 2 0 1 1 0 0 0 15080 677 15939 38528 30837 30837 1 0 0 VPVNELK FDVNMKPVVQEPNQKVPVNELKVKMKPKPW VVQEPNQKVPVNELKVKMKPKPWSKRWERP K V P L K V 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 7 0 797.4647 P49406 P49406 215 221 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.042447 95.352 By MS/MS 8 0 1 1 1915100 1915100 0 15081 948 15940 38529 30838 30838 1 24177 0 VPVNEVVIR YTYLISILKDMKQNRVPVNEVVIRQLEFAA DMKQNRVPVNEVVIRQLEFAAQYPPTFDRY R V P I R Q 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 4 0 0 9 0 1023.6077 O75127 O75127 618 626 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.011374 98.033 By MS/MS 5 0 1 1 2236500 2236500 0 15082 293 15941 38530 30839 30839 1 22430 0 VPVNLLNSPDCDVK LRQTNKTKQSCPFGRVPVNLLNSPDCDVKT RVPVNLLNSPDCDVKTDDSVVPCFMKRQTS R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 4.0846E-07 205.31 By MS/MS 4 0 1 1 953860 953860 0 15083 805 15942 38531 30840 30840 1 89764 0 VPVNLLR HACFRLFLTMEINPKVPVNLLRAGRIFVFE LTMEINPKVPVNLLRAGRIFVFEPPPGVKA K V P L R A 0 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 7 0 809.51232 Q14204 Q14204 4134 4140 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.047453 91.584 By MS/MS 3 1.41 1 1 1 1 1 5 4371800 4371800 0 15084 1433 15943 38532;38533;38534;38535;38536 30841 30841 1 850880 0 VPVPEDKYTAQVDAEEKEDVK AGLVDDFEKKFNALKVPVPEDKYTAQVDAE KYTAQVDAEEKEDVKSCAEWVSLSKARIVE K V P V K S 2 0 0 3 0 1 4 0 0 0 0 3 0 0 2 0 1 0 1 4 0 0 21 2 2388.1697 O75947 O75947 79 99 ATP5H ATP synthase subunit d, mitochondrial yes yes 3;4 1.9099E-05 121.77 By MS/MS 9 0 2 2 2323700 2323700 0 15085 356 15944 38537;38538 30842;30843 30843 2 45731 0 VPVVFVTNAGNILQHSK LKAFRRLVNSQGQLRVPVVFVTNAGNILQH VVFVTNAGNILQHSKAQELSALLGCEVDAD R V P S K A 1 0 2 0 0 1 0 1 1 1 1 1 0 1 1 1 1 0 0 4 0 0 17 0 1822.0101 Q9BXW7 Q9BXW7 83 99 CECR5 Cat eye syndrome critical region protein 5 yes yes 3 0.00018908 137.27 By MS/MS 7 0 1 1 1793000 1793000 0 15086 2361 15945 38539 30844 30844 1 28147 0 VQAGDVITIDK YDLGTKMIESLTKDKVQAGDVITIDKATGK TKDKVQAGDVITIDKATGKISKLGRSFTRA K V Q D K A 1 0 0 2 0 1 0 1 0 2 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1157.6292 Q9Y230 Q9Y230 187 197 RUVBL2 RuvB-like 2 yes yes 2 0.0012233 117.14 By MS/MS By matching 6 0 2 1 1 4159900 4115000 44879 15087 2810 15946 38540;38541 30845 30845 1 28287 45988 VQAHAAAALINFTEDCPK IAALLQTMEDQGNQRVQAHAAAALINFTED HAAAALINFTEDCPKSLLIPYLDNLVKHLH R V Q P K S 5 0 1 1 1 1 1 0 1 1 1 1 0 1 1 0 1 0 0 1 0 0 18 0 1954.9571 O00410 O00410 458 475 IPO5 Importin-5 yes yes 3 0.00058518 113.52 By MS/MS 4.5 0.5 1 1 2 2556500 2556500 0 15088 103 15947 38542;38543 30846 30846 1 199680 0 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1585.7584 P35527;CON__P35527 P35527 171 184 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.6275E-43 322.7 By MS/MS By MS/MS 3.92 2.2 2 2 2 2 2 2 1 7 6 24713000 15174000 9539100 + 15089 822 15948 38544;38545;38546;38547;38548;38549;38550;38551;38552;38553;38554;38555;38556 30847;30848;30849;30850;30851;30852;30853;30854;30855;30856;30857;30858;30859;30860;30861;30862;30863;30864;30865 30857 19 1202400 8954400 VQAMQPAFASK LPAHRQALGERLYPRVQAMQPAFASKITGM LYPRVQAMQPAFASKITGMLLELSPAQLLL R V Q S K I 3 0 0 0 0 2 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 11 0 1176.5961 O95071 O95071 2405 2415 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.002823 109.42 By MS/MS 1.67 0.471 1 2 3 838750 838750 0 15090 384 15949;15950 38557;38558;38559 30866;30867;30868 30867 153 3 273260 0 VQAQGHTLQVAGLR EVELSARRLRAWGARVQAQGHTLQVAGLRG RVQAQGHTLQVAGLRGPVLRLREPLGVLAV R V Q L R G 2 1 0 0 0 3 0 2 1 0 2 0 0 0 0 0 1 0 0 2 0 0 14 0 1476.8161 Q8IZ83 Q8IZ83 638 651 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2;3 0.0075696 99.669 By MS/MS 4.67 0.471 1 2 3 2777300 2777300 0 15091 1892 15951 38560;38561;38562 30869;30870 30870 2 84577 0 VQAQVIQETIVPK MQQQQQTTQQQLPQKVQAQVIQETIVPKEP QKVQAQVIQETIVPKEPPPEFEFIADPPSI K V Q P K E 1 0 0 0 0 3 1 0 0 2 0 1 0 0 1 0 1 0 0 3 0 0 13 0 1451.8348 Q15459 Q15459 132 144 SF3A1 Splicing factor 3A subunit 1 yes yes 2 1.6338E-07 205.07 By MS/MS 4 0 1 1 2417300 2417300 0 15092 1515 15952 38563 30871;30872 30871 2 227480 0 VQDAVQQHQQK ASEDGVLTEAMMDTRVQDAVQQHQQKMCWL MDTRVQDAVQQHQQKMCWLKAEGPGRGDEP R V Q Q K M 1 0 0 1 0 5 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 11 0 1307.6582 Q9NVI7 Q9NVI7 606 616 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 1.562E-06 183.72 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 5759900 5741300 18568 15093 2598 15953 38564;38565;38566 30873;30874 30874 2 55913 15593 VQDDEVGDGTTSVTVLAAELLR GVDNPAAKVLVDMSRVQDDEVGDGTTSVTV DGTTSVTVLAAELLREAESLIAKKIHPQTI R V Q L R E 2 1 0 3 0 1 2 2 0 0 3 0 0 0 0 1 3 0 0 4 0 0 22 0 2287.1543 P78371 P78371 90 111 CCT2 T-complex protein 1 subunit beta yes yes 2;3 3.29E-47 327.27 By MS/MS 6.75 0.829 2 1 1 4 15034000 15034000 0 15094 1222 15954 38567;38568;38569;38570 30875;30876;30877 30877 3 103960 0 VQDDIKESVR DIIDKLPEIWETLFRVQDDIKESVRKAAEL ETLFRVQDDIKESVRKAAELALKTLSKVCV R V Q V R K 0 1 0 2 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 2 0 0 10 1 1187.6146 Q5VYK3 Q5VYK3 1212 1221 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0075407 113.44 By MS/MS 2.5 0.5 1 1 2 556480 556480 0 15095 1656 15955 38571;38572 30878 30878 1 149890 0 VQDDIKESVRK DIIDKLPEIWETLFRVQDDIKESVRKAAEL TLFRVQDDIKESVRKAAELALKTLSKVCVK R V Q R K A 0 1 0 2 0 1 1 0 0 1 0 2 0 0 0 1 0 0 0 2 0 0 11 2 1315.7096 Q5VYK3 Q5VYK3 1212 1222 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 0.02753 79.23 By MS/MS 2.5 0.5 1 1 2 494180 494180 0 15096 1656 15956 38573;38574 30879 30879 1 133390 0 VQDLSAGGQGSLTDSGPER LCRALQTERNDLNKRVQDLSAGGQGSLTDS SAGGQGSLTDSGPERRPEGPGAQAPSSPRV R V Q E R R 1 1 0 2 0 2 1 4 0 0 2 0 0 0 1 3 1 0 0 1 0 0 19 0 1872.8813 P40222 P40222 485 503 TXLNA Alpha-taxilin yes yes 2 3.1844E-25 292.76 By MS/MS 5 0 1 1 4135000 4135000 0 15097 857 15957 38575 30880 30880 1 41472 0 VQDSAPVETPR SPSRAPGLRQRASNKVQDSAPVETPRGKPP ASNKVQDSAPVETPRGKPPLNTRSQAPLLR K V Q P R G 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 1 1 0 0 2 0 0 11 0 1197.599 P09601 P09601 244 254 HMOX1 Heme oxygenase 1 yes yes 2 0.028427 98.754 By MS/MS 8 0 1 1 524370 524370 0 15098 538 15958 38576 30881 30881 1 6620.1 0 VQEAIAEVAAELNPDGSAQQQSK MFATNVTENVLNSSRVQEAIAEVAAELNPD AAELNPDGSAQQQSKAVNKVKKKAKRILQE R V Q S K A 5 0 1 1 0 4 3 1 0 1 1 1 0 0 1 2 0 0 0 2 0 0 23 0 2382.1663 Q9HCL2 Q9HCL2 139 161 GPAM Glycerol-3-phosphate acyltransferase 1, mitochondrial yes yes 3 0.0064466 73.461 By MS/MS 4 0 1 1 296860 296860 0 15099 2514 15959 38577 30882 30882 1 27936 0 VQEAIIHFR QALLLKGAALRNMGRVQEAIIHFREAIRLA LRNMGRVQEAIIHFREAIRLAPCRLDCYEG R V Q F R E 1 1 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1111.6138 Q9UJX3 Q9UJX3 389 397 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2 0.0080696 117.31 By MS/MS 5 0 1 1 0 0 0 15100 2752 15960 38578 30883 30883 1 0 0 VQEAINSLGGSVFPK TATLTAPEFPEFATKVQEAINSLGGSVFPK VQEAINSLGGSVFPKLNWSAPRDAYWIAMN K V Q P K L 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 2 0 0 0 2 0 0 15 0 1544.8199 O75794 O75794 90 104 CDC123 Cell division cycle protein 123 homolog yes yes 2 0.00059567 156.6 By MS/MS 7 0 1 1 428810 428810 0 15101 346 15961 38579 30884 30884 1 6731.5 0 VQEIQVVK EGQGVEICFELYNPRVQEIQVVKLEKRLDD FELYNPRVQEIQVVKLEKRLDDSLLYLRDA R V Q V K L 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 3 0 0 8 0 941.55458 P49406 P49406 171 178 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.0069952 116.25 By MS/MS 8 0 1 1 2796100 2796100 0 15102 948 15962 38580 30885 30885 1 35301 0 VQEIQVVKLEK EGQGVEICFELYNPRVQEIQVVKLEKRLDD YNPRVQEIQVVKLEKRLDDSLLYLRDALPE R V Q E K R 0 0 0 0 0 2 2 0 0 1 1 2 0 0 0 0 0 0 0 3 0 0 11 1 1311.7762 P49406 P49406 171 181 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2;3 5.7793E-05 166.29 By MS/MS 8 0 2 2 4150000 4150000 0 15103 948 15963 38581;38582 30886;30887 30887 2 52393 0 VQELETSLAELR QVHTLREEKECSMSRVQELETSLAELRNQM MSRVQELETSLAELRNQMAEPPPPEPPAGP R V Q L R N 1 1 0 0 0 1 3 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1386.7355 Q08379 Q08379 432 443 GOLGA2 Golgin subfamily A member 2 yes yes 2 5.3221E-18 259.35 By MS/MS 3 0 1 1 250040 250040 0 15104 1308 15964 38583 30888 30888 1 4575 0 VQELGHGCAALVTK VAAENEEIGSHIKHRVQELGHGCAALVTKA RVQELGHGCAALVTKAGALQCSPSDAYTKK R V Q T K A 2 0 0 0 1 1 1 2 1 0 2 1 0 0 0 0 1 0 0 2 0 0 14 0 1481.766 Q9Y490 Q9Y490 1920 1933 TLN1 Talin-1 yes yes 2;3 0.00047359 126.32 By MS/MS 2.8 0.748 2 2 1 5 3854800 3854800 0 15105 2888 15965 38584;38585;38586;38587;38588 30889;30890 30890 2 1118400 0 VQELQQQSAR RQDEVLQARAQELQKVQELQQQSAREVGEL QELQKVQELQQQSAREVGELQGRVAQLEEE K V Q A R E 1 1 0 0 0 4 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1185.6102 Q7Z406 Q7Z406 881 890 MYH14 Myosin-14 yes yes 2 0.00050306 133.23 By MS/MS 2 0 1 1 327700 327700 0 15106 1788 15966 38589 30891 30891 1 110840 0 VQEMVESNEAK EKLFGEKGSDRFRQKVQEMVESNEAKLVAL FRQKVQEMVESNEAKLVALVNKFIGYLKQN K V Q A K L 1 0 1 0 0 1 3 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 11 0 1262.5813 Q14C86 Q14C86 247 257 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.017597 85.963 By MS/MS 2 0 1 1 0 0 0 15107 1466 15967 38590 30892 30892 862 1 0 0 VQENCIDLVGR LLPRLTPILKNRHEKVQENCIDLVGRIADR RHEKVQENCIDLVGRIADRGAEYVSAREWM K V Q G R I 0 1 1 1 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1301.6398 O75533 O75533 1031 1041 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00012915 149.33 By MS/MS By MS/MS 3.33 0.471 2 1 2 1 5060100 4933500 126640 15108 332 15968 38591;38592;38593 30893;30894 30894 2 143220 16120 VQEQELKSEFEQNLSEK RQAAAHTDHLRDVLRVQEQELKSEFEQNLS EQELKSEFEQNLSEKLSEQELQFRRLSQEQ R V Q E K L 0 0 1 0 0 3 5 0 0 0 2 2 0 1 0 2 0 0 0 1 0 0 17 1 2064.0011 Q16891 Q16891 500 516 IMMT MICOS complex subunit MIC60 yes yes 3 0.011563 113.28 By MS/MS 4 0 1 1 2075700 2075700 0 15109 1563 15969 38594 30895 30895 1 195340 0 VQEQELTR QKANSSATETINKLKVQEQELTRLRIDYER ETINKLKVQEQELTRLRIDYERVSQERTVK K V Q T R L 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 1001.5142 P15924 P15924 1530 1537 DSP Desmoplakin yes yes 2 0.0014398 156.35 By MS/MS By MS/MS 4.43 3.66 2 1 1 1 2 4 3 2047600 1179100 868480 15110 628 15970 38595;38596;38597;38598;38599;38600;38601 30896;30897;30898 30897 3 281090 290070 VQESADELQK TQGLIFVVDSNDRERVQESADELQKMLQED NDRERVQESADELQKMLQEDELRDAVLLVF R V Q Q K M 1 0 0 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1145.5564 P84085 P84085 100 109 ARF5 ADP-ribosylation factor 5 yes yes 2 4.2391E-08 198.72 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 9595700 9546700 48951 15111 1244 15971 38602;38603;38604 30899;30900;30901 30901 3 239810 111620 VQESLKKQEGLLK SVTELDRVYGGLTTKVQESLKKQEGLLKNI TKVQESLKKQEGLLKNIQVSHQEFSKMKQS K V Q L K N 0 0 0 0 0 2 2 1 0 0 3 3 0 0 0 1 0 0 0 1 0 0 13 2 1498.8719 Q8WUM4 Q8WUM4 615 627 PDCD6IP Programmed cell death 6-interacting protein yes yes 3 0.034987 73.082 By MS/MS 4 0 1 1 456940 456940 0 15112 2018 15972 38605 30902 30902 1 43001 0 VQFCPFEK AALARLGLRPVKQVRVQFCPFEKNVESTRT RPVKQVRVQFCPFEKNVESTRTFLQTVSSE R V Q E K N 0 0 0 0 1 1 1 0 0 0 0 1 0 2 1 0 0 0 0 1 0 0 8 0 1053.4954 Q96EL3 Q96EL3 18 25 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 0.0076078 113.41 By MS/MS By matching 10 0 2 1 1 4487900 4432400 55535 15113 2146 15973 38606;38607 30903 30903 1 238890 71100 VQFDGTNSAFK YNVSTTPYLQSVKKKVQFDGTNSAFKELKF VKKKVQFDGTNSAFKELKFLTPVRRSRRLQ K V Q F K E 1 0 1 1 0 1 0 1 0 0 0 1 0 2 0 1 1 0 0 1 0 0 11 0 1212.5775 Q8WWK9 Q8WWK9 607 617 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.02395 93.667 By MS/MS 4 0 1 1 0 0 0 15114 2035 15974 38608 30904 30904 1 0 0 VQGDYFETLLYK SCIAVPPLEGFVMNRVQGDYFETLLYKIFV MNRVQGDYFETLLYKIFVSIDEHTNVAELA R V Q Y K I 0 0 0 1 0 1 1 1 0 0 2 1 0 1 0 0 1 0 2 1 0 0 12 0 1474.7344 Q658Y4 Q658Y4 246 257 FAM91A1 Protein FAM91A1 yes yes 2 1.0129E-17 248.98 By MS/MS 4.5 0.5 1 1 2 652760 652760 0 15115 1668 15975 38609;38610 30905;30906 30905 2 52826 0 VQGGALEDSQLVAGVAFK MLDDLLQLKMIGIKKVQGGALEDSQLVAGV GALEDSQLVAGVAFKKTFSYAGFEMQPKKY K V Q F K K 3 0 0 1 0 2 1 3 0 0 2 1 0 1 0 1 0 0 0 3 0 0 18 0 1787.9418 Q99832 Q99832 200 217 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.4954E-07 219.95 By MS/MS 6 0 3 3 28376000 28376000 0 15116 2270 15976 38611;38612;38613 30907;30908;30909 30908 3 195060 0 VQGGALEDSQLVAGVAFKK MLDDLLQLKMIGIKKVQGGALEDSQLVAGV ALEDSQLVAGVAFKKTFSYAGFEMQPKKYH K V Q K K T 3 0 0 1 0 2 1 3 0 0 2 2 0 1 0 1 0 0 0 3 0 0 19 1 1916.0367 Q99832 Q99832 200 218 CCT7 T-complex protein 1 subunit eta yes yes 2;3 5.9091E-11 233.28 By MS/MS 6.33 0.471 2 1 3 47337000 47337000 0 15117 2270 15977 38614;38615;38616 30910;30911 30911 2 327400 0 VQGLLEEEAAAR LGGSGGAGGRLTRGRVQGLLEEEAAARGRL RGRVQGLLEEEAAARGRLERTRLGALALPR R V Q A R G 3 1 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1284.6674 Q6SPF0 Q6SPF0 273 284 SAMD1 Atherin yes yes 2 0.019952 105.13 By MS/MS 4.5 0.5 1 1 2 1158900 1158900 0 15118 1725 15978 38617;38618 30912 30912 1 66897 0 VQGSDSDEEVVVATTR KEKVEFGVLVSFAYKVQGSDSDEEVVVATT QGSDSDEEVVVATTRIETMLGDVAVAVHPK K V Q T R I 1 1 0 2 0 1 2 1 0 0 0 0 0 0 0 2 2 0 0 4 0 0 16 0 1690.801 P26640 P26640 522 537 VARS Valine--tRNA ligase yes yes 2 3.6207E-12 269.88 By MS/MS 3.5 0.5 1 1 2 3190000 3190000 0 15119 735 15979 38619;38620 30913 30913 1 141870 0 VQHITDATLAIVK TSSLSHTLFAESGNKVQHITDATLAIVKGE NKVQHITDATLAIVKGETVPLDVLQIKGEK K V Q V K G 2 0 0 1 0 1 0 0 1 2 1 1 0 0 0 0 2 0 0 2 0 0 13 0 1407.8086 Q53H12 Q53H12 172 184 AGK Acylglycerol kinase, mitochondrial yes yes 2;3 7.2725E-08 215.02 By MS/MS 7.2 0.748 1 2 2 5 10913000 10913000 0 15120 1589 15980 38621;38622;38623;38624;38625 30914;30915 30914 2 158620 0 VQIAVANAQELLQR GSGKLDPGLIMEQVKVQIAVANAQELLQRM KVQIAVANAQELLQRMTDKCFRKCIGKPGG K V Q Q R M 3 1 1 0 0 3 1 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 14 0 1551.8733 Q9Y5L4 Q9Y5L4 28 41 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 1.627E-33 312.69 By MS/MS 10 0 1 1 578600 578600 0 15121 2916 15981 38626 30916 30916 1 31184 0 VQIEHISSLIK LLEQNLIRVIEPFSRVQIEHISSLIKLSKA PFSRVQIEHISSLIKLSKADVERKLSQMIL R V Q I K L 0 0 0 0 0 1 1 0 1 3 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1265.7343 O00231 O00231 345 355 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2;3 0.00021416 141.89 By MS/MS 6.5 0.5 2 2 4 16921000 16921000 0 15122 93 15982 38627;38628;38629;38630 30917;30918 30917 2 248280 0 VQILKDYVR GIGHRVKSINNPDMRVQILKDYVRQHFPAT NNPDMRVQILKDYVRQHFPATPLLDYALEV R V Q V R Q 0 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 2 0 0 9 1 1132.6604 P53396 P53396 987 995 ACLY ATP-citrate synthase yes yes 2;3 0.0068003 120.31 By MS/MS 3.25 0.829 1 1 2 4 8574000 8574000 0 15123 1030 15983 38631;38632;38633;38634 30919;30920 30920 2 816720 0 VQISAVHSEEDIDR GFSYPVVPKGKARIRVQISAVHSEEDIDRC RVQISAVHSEEDIDRCVEAFVEVGRLHGAL R V Q D R C 1 1 0 2 0 1 2 0 1 2 0 0 0 0 0 2 0 0 0 2 0 0 14 0 1596.7744 O75600 O75600 390 403 GCAT 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes yes 2 0.0024002 114.76 By MS/MS 7 0 1 1 283510 283510 0 15124 336 15984 38635 30921 30921 0 4450.6 0 VQLDLAETDLSQGVAR SNSSFMSRERELLGKVQLDLAETDLSQGVA QLDLAETDLSQGVARWYDLMDNKDKGSS__ K V Q A R W 2 1 0 2 0 2 1 1 0 0 3 0 0 0 0 1 1 0 0 2 0 0 16 0 1713.8897 Q9BSJ8 Q9BSJ8 1076 1091 ESYT1 Extended synaptotagmin-1 yes yes 2 5.5904E-24 307.77 By MS/MS 5.33 3.2 1 1 1 1 1 1 6 2835500 2835500 0 15125 2308 15985 38636;38637;38638;38639;38640;38641 30922;30923;30924;30925;30926 30926 4 64776 0 VQLPAYLKR ______________________________ VARIVKVQLPAYLKRLPVPESITGFARLTV K V Q K R L 1 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 9 1 1086.655 Q8N5K1 Q8N5K1 12 20 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 3 0.032823 76.827 By MS/MS 10 0 1 1 335430 335430 0 15126 1923 15986 38642 30927 30927 1 18078 0 VQMLLSDR KGNNPKGYLPSHYERVQMLLSDRFLGFFMV LPSHYERVQMLLSDRFLGFFMVPAQSSWNY R V Q D R F 0 1 0 1 0 1 0 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 8 0 960.50625 Q6P2Q9 Q6P2Q9 2259 2266 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.025824 93.178 By MS/MS 2 0 1 1 527870 527870 0 15127 1708 15987 38643 30928 30928 1 178550 0 VQNATLAVANITNADSATR KDSVTISVDGVVYYRVQNATLAVANITNAD TLAVANITNADSATRLLAQTTLRNVLGTKN R V Q T R L 5 1 3 1 0 1 0 0 0 1 1 0 0 0 0 1 3 0 0 2 0 0 19 0 1928.9916 P27105 P27105 126 144 STOM Erythrocyte band 7 integral membrane protein yes yes 2 5.1394E-34 304.03 By MS/MS 8 0 1 1 1956100 1956100 0 15128 737 15988 38644 30929 30929 1 24696 0 VQNMALYADVGGK ETVFIVEISLTCKNRVQNMALYADVGGKQF NRVQNMALYADVGGKQFPVTRGQDVGRYQV R V Q G K Q 2 0 1 1 0 1 0 2 0 0 1 1 1 0 0 0 0 0 1 2 0 0 13 0 1364.6758 P51571 P51571 61 73 SSR4 Translocon-associated protein subunit delta yes yes 2 2.6441E-12 246.08 By MS/MS 9.5 0.5 2 2 4 14141000 14141000 0 15129 998 15989;15990 38645;38646;38647;38648 30930;30931;30932;30933;30934;30935 30935 552 6 462730 0 VQPVIGENGGDAR FALLGTWDEKMECFKVQPVIGENGGDARQR FKVQPVIGENGGDARQRGHEAEESRVMLWK K V Q A R Q 1 1 1 1 0 1 1 3 0 1 0 0 0 0 1 0 0 0 0 2 0 0 13 0 1310.6579 P22059 P22059 655 667 OSBP Oxysterol-binding protein 1 yes yes 2 0.0078059 97.163 By MS/MS 4 0 1 1 591950 591950 0 15130 686 15991 38649 30936 30936 1 55706 0 VQQLMAK IHKEAEMEEHREHIKVQQLMAKGSDKRRGG EEHREHIKVQQLMAKGSDKRRGGPPGPPIS K V Q A K G 1 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 816.45276 Q04637 Q04637 1020 1026 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.03963 97.473 By MS/MS 2 0 1 1 3178700 3178700 0 15131 1291 15992 38650 30937 30937 1 1075200 0 VQQLVAK VHRQLGEANEEFALRVQQLVAKELGQTGTR ANEEFALRVQQLVAKELGQTGTRLTPADKA R V Q A K E 1 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 784.48069 Q9Y679 Q9Y679 244 250 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.0091833 138.48 By MS/MS By matching 7 0 2 1 1 7448700 7416200 32542 15132 2934 15993 38651;38652 30938 30938 1 116420 58607 VQQQEDEITVLK STSDVQDRLSALESRVQQQEDEITVLKAAL ESRVQQQEDEITVLKAALADVLRRLAISED R V Q L K A 0 0 0 1 0 3 2 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1428.746 Q9HC35 Q9HC35 31 42 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 2.4333E-05 175.49 By MS/MS 2 0.816 1 1 1 3 866260 866260 0 15133 2510 15994 38653;38654;38655 30939;30940 30939 2 193250 0 VQQTVQDLFGR IGEVILVGGMTRMPKVQQTVQDLFGRAPSK RMPKVQQTVQDLFGRAPSKAVNPDEAVAIG K V Q G R A 0 1 0 1 0 3 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1289.6728 P38646 P38646 395 405 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.6055E-09 219.03 By MS/MS By MS/MS 5.4 1.02 1 2 1 1 4 1 100350000 100080000 264990 15134 850 15995 38656;38657;38658;38659;38660 30941;30942;30943;30944;30945;30946 30945 6 1049500 222540 VQQTVQDLFGRAPSK IGEVILVGGMTRMPKVQQTVQDLFGRAPSK VQQTVQDLFGRAPSKAVNPDEAVAIGAAIQ K V Q S K A 1 1 0 1 0 3 0 1 0 0 1 1 0 1 1 1 1 0 0 2 0 0 15 1 1672.8897 P38646 P38646 395 409 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 5.4881E-09 167.22 By MS/MS 5.33 0.471 2 1 3 11046000 11046000 0 15135 850 15996 38661;38662;38663 30947;30948 30948 1 109260 0 VQSAAPAR FYPSRAQPPSSAASRVQSAAPARPGPAAHV PSSAASRVQSAAPARPGPAAHVYPAGSQVM R V Q A R P 3 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 8 0 798.4348 Q04637 Q04637 66 73 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0057163 122.18 By MS/MS 2 0 1 1 2034000 2034000 0 15136 1291 15997 38664 30949 30949 1 687970 0 VQSGNINAAK VLVLSQNTKRESGRKVQSGNINAAKTIADI ESGRKVQSGNINAAKTIADIIRTCLGPKSM K V Q A K T 2 0 2 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 0 1000.5302 P49368 P49368 22 31 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.7483E-06 178.55 By MS/MS By matching 6.71 1.67 2 2 1 1 1 5 2 54012000 53884000 127940 15137 947 15998 38665;38666;38667;38668;38669;38670;38671 30950;30951;30952;30953 30951 4 471390 124910 VQSSIAFLCGK FNTTVSCDQQGTNHRVQSSIAFLCGKTLGT TNHRVQSSIAFLCGKTLGTPEFVTATECVH R V Q G K T 1 0 0 0 1 1 0 1 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1208.6223 P11717 P11717 126 136 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.005702 102.06 By MS/MS 1.5 0.5 1 1 2 268400 268400 0 15138 583 15999 38672;38673 30954 30954 1 79182 0 VQSVEQIREVASGAAR RRATWLHQALREGTRVQSVEQIREVASGAA QSVEQIREVASGAARIRGETLGIIGLGRVG R V Q A R I 3 2 0 0 0 2 2 1 0 1 0 0 0 0 0 2 0 0 0 3 0 0 16 1 1698.9013 P56545;Q13363 Q13363 156 171 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 3 0.041296 63.29 By MS/MS 7 0 1 1 1320000 1320000 0 15139 1374;1073 16000 38674 30955 30955 1 20721 0 VQTESSTGSVGSNR LVQVGDSLRASTIRKVQTESSTGSVGSNRV KVQTESSTGSVGSNRVRTTLTLCVEAIDFD K V Q N R V 0 1 1 0 0 1 1 2 0 0 0 0 0 0 0 4 2 0 0 2 0 0 14 0 1407.659 Q9BRX2 Q9BRX2 47 60 PELO Protein pelota homolog yes yes 2 2.1266E-11 241.35 By MS/MS 7 0 1 1 1575600 1575600 0 15140 2301 16001 38675 30956 30956 1 24735 0 VQTFPFLGR NFDLPYLISRAQTLKVQTFPFLGRVAGLCS RAQTLKVQTFPFLGRVAGLCSNIRDSSFQS K V Q G R V 0 1 0 0 0 1 0 1 0 0 1 0 0 2 1 0 1 0 0 1 0 0 9 0 1063.5815 P28340 P28340 415 423 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.012583 95.909 By MS/MS 4 0.816 1 1 1 3 400750 400750 0 15141 754 16002 38676;38677;38678 30957;30958 30957 2 22803 0 VQVALEELQDLK LELTDTGLLSGSEERVQVALEELQDLKGVW EERVQVALEELQDLKGVWSELSKVWEQIDQ R V Q L K G 1 0 0 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1383.7609 Q14204 Q14204 1319 1330 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00024544 164.48 By MS/MS 2 0.816 1 1 1 3 1221000 1221000 0 15142 1433 16003 38679;38680;38681 30959;30960 30959 2 326890 0 VQVEYKGETK KHWPFMVVNDAGRPKVQVEYKGETKSFYPE AGRPKVQVEYKGETKSFYPEEVSSMVLTKM K V Q T K S 0 0 0 0 0 1 2 1 0 0 0 2 0 0 0 0 1 0 1 2 0 0 10 1 1179.6136 P11142;P54652 P11142 103 112 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 3.3243E-05 176.6 By MS/MS By MS/MS 5.86 1.12 4 1 1 1 5 2 56336000 55660000 675050 15143 572 16004 38682;38683;38684;38685;38686;38687;38688 30961;30962;30963;30964;30965;30966 30963 6 559930 566900 VQVNHEK FIALDLGGSSFRILRVQVNHEKNQNVHMES GSSFRILRVQVNHEKNQNVHMESEVYDTPE R V Q E K N 0 0 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 7 0 852.44537 P19367 P19367 95 101 HK1 Hexokinase-1 yes yes 2 0.034509 101.33 By MS/MS 4 0 1 1 267630 267630 0 15144 660 16005 38689 30967 30967 1 25186 0 VQVQDNEGCPVEALVK EFTVDAKHGGKAPLRVQVQDNEGCPVEALV QVQDNEGCPVEALVKDNGNGTYSCSYVPRK R V Q V K D 1 0 1 1 1 2 2 1 0 0 1 1 0 0 1 0 0 0 0 4 0 0 16 0 1783.8774 P21333 P21333 709 724 FLNA Filamin-A yes yes 2 1.6892E-11 234.04 By MS/MS 2.5 1.12 1 1 1 1 4 4203700 4203700 0 15145 677 16006 38690;38691;38692;38693 30968;30969;30970;30971;30972 30970 5 949350 0 VQVSYKGETK KHWPFQVINDGDKPKVQVSYKGETKAFYPE GDKPKVQVSYKGETKAFYPEEISSMVLTKM K V Q T K A 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 1 1 0 1 2 0 0 10 1 1137.603 P0DMV9;P0DMV8 P0DMV9 103 112 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 4.8557E-05 176.6 By MS/MS By matching 6.12 1.05 3 2 2 1 7 1 46244000 46189000 54628 15146 550 16007 38694;38695;38696;38697;38698;38699;38700;38701 30973;30974 30973 2 461430 45876 VQVVGTYR ILDDDLVDKAKPGDRVQVVGTYRCLPGKKG KAKPGDRVQVVGTYRCLPGKKGGYTSGTFR R V Q Y R C 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 3 0 0 8 0 920.50797 P25205 P25205 235 242 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.011474 95.909 By MS/MS 4 0 1 1 1913700 1913700 0 15147 719 16008 38702 30975 30975 1 180090 0 VQYPQSQACK QRVKDDIESLHDKFKVQYPQSQACKMSHVR HDKFKVQYPQSQACKMSHVRDLPPVSGSII K V Q C K M 1 0 0 0 1 3 0 0 0 0 0 1 0 0 1 1 0 0 1 1 0 0 10 0 1207.5656 Q14204 Q14204 625 634 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.5966E-07 185.81 By MS/MS 1.5 0.5 1 1 2 1963700 1963700 0 15148 1433 16009 38703;38704 30976;30977 30976 2 595740 0 VRAEEREQIK LLTPLNLQIDPAIQRVRAEEREQIKTLNNK PAIQRVRAEEREQIKTLNNKFASFIDKVRF R V R I K T 1 2 0 0 0 1 3 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 2 1256.6837 CON__P02538;P02538;CON__O95678;O95678;CON__P04259;CON__P48668;P48668 CON__P04259 159 168 KRT6A;KRT75;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C no no 2;3 0.013153 109.44 By MS/MS By MS/MS 4.44 2.71 1 2 1 1 1 1 1 1 6 3 4526600 3443000 1083600 + 15149 44;56;40 16010 38705;38706;38707;38708;38709;38710;38711;38712;38713 30978;30979 30979 2 188030 1366300 VRALEESNYELEGK TMQNLNDRLASYLDKVRALEESNYELEGKI KVRALEESNYELEGKIKEWYEKHGNSHQGE K V R G K I 1 1 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 14 1 1635.8104 CON__P13645;P13645;CON__P02535-1 CON__P13645 164 177 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 4.8E-06 162.48 By matching By MS/MS 3.33 0.471 2 1 1 2 3465400 499860 2965500 + 15150 50 16011 38714;38715;38716 30980;30981 30981 2 47040 377470 VRDALTAEK LEEVKVLLEKATRKRVRDALTAEKSKIETE KATRKRVRDALTAEKSKIETEIKNKMQQKS R V R E K S 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 1001.5506 Q9HB71 Q9HB71 25 33 CACYBP Calcyclin-binding protein yes yes 2 0.039276 104.05 By MS/MS 8 0 1 1 2708200 2708200 0 15151 2501 16012 38717 30982 30982 1 34191 0 VRDIAIATR DVLEGVVLSPSLEARVRDIAIATRNTKKNR PSLEARVRDIAIATRNTKKNRGLYRHILLY R V R T R N 2 2 0 1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 9 1 1013.5982 Q9NVI7;Q5T9A4 Q5T9A4 328 336 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 0.012378 114.89 By MS/MS By matching 5.75 0.829 2 1 1 3 1 17252000 17186000 65560 15152 2598;1638 16013 38718;38719;38720;38721 30983;30984 30983 2 169880 55056 VRDKLNNLVLFDK KSGGKAKKKKWSKGKVRDKLNNLVLFDKAT GKVRDKLNNLVLFDKATYDKLCKEVPNYKL K V R D K A 0 1 2 2 0 0 0 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 13 2 1572.8988 P62851 P62851 40 52 RPS25 40S ribosomal protein S25 yes yes 3 0.0057774 98.337 By MS/MS 9.5 0.5 1 1 2 3714200 3714200 0 15153 1176 16014 38722;38723 30985;30986 30985 2 99794 0 VRDLFALAR GSEFLEMFVGVGPARVRDLFALARKNAPCI GVGPARVRDLFALARKNAPCILFIDEIDAV R V R A R K 2 2 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 1 1059.6189 Q9Y4W6 Q9Y4W6 389 397 AFG3L2 AFG3-like protein 2 yes yes 2 0.036312 105.1 By MS/MS 5 0 1 1 1174600 1174600 0 15154 2902 16015 38724 30987 30987 1 11781 0 VRDLLAEQR RLPCAVLRARLLQPRVRDLLAEQRFPGRVL RLLQPRVRDLLAEQRFPGRVLPSDLDLLLH R V R Q R F 1 2 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 1 1098.6146 Q8WUY1 Q8WUY1 41 49 THEM6 Protein THEM6 yes yes 2 0.030391 107.21 By MS/MS 9 0 1 1 770740 770740 0 15155 2019 16016 38725 30988 30988 1 15168 0 VRDNICGALAR LGLLFPLLARERHDRVRDNICGALARLLMA RHDRVRDNICGALARLLMASPTRKPEPQVL R V R A R L 2 2 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 1 1243.6455 Q8TEX9 Q8TEX9 957 967 IPO4 Importin-4 yes yes 2;3 0.0029467 112.71 By MS/MS By matching 3 0 3 2 1 1063600 976550 87030 15156 2005 16017 38726;38727;38728 30989;30990 30990 2 17868 11078 VRDVLDFYNVPIQDR LGHVVPNSRLHQMCRVRDVLDFYNVPIQDR VRDVLDFYNVPIQDRSKFDELSASNLPPNL R V R D R S 0 2 1 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 3 0 0 15 1 1847.953 Q8N5N7 Q8N5N7 123 137 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 3 0.02106 74.966 By MS/MS 10 0 1 1 125920 125920 0 15157 1925 16018 38729 30991 30991 1 6786.4 0 VREAAEKAK ETGVDLTKDNMALQRVREAAEKAKCELSSS NMALQRVREAAEKAKCELSSSVQTDINLPY R V R A K C 3 1 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 2 1000.5665 P38646 P38646 308 316 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.010675 122.96 By MS/MS 4.5 0.5 1 1 2 171760 171760 0 15158 850 16019 38730;38731 30992 30992 1 4029.9 0 VREELIDKK QDKDTLSIHYLMLPRVREELIDKKTESAVS YLMLPRVREELIDKKTESAVSQMQSVIELG R V R K K T 0 1 0 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 2 1128.6503 P41252 P41252 809 817 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.03377 86.882 By MS/MS 3 0 1 1 5612400 5612400 0 15159 871 16020 38732 30993 30993 1 102690 0 VREEVPLELVEAHVK VASAAAKAALEEFSRVREEVPLELVEAHVK VREEVPLELVEAHVKKVQEAARASGKVDPT R V R V K K 1 1 0 0 0 0 4 0 1 0 2 1 0 0 1 0 0 0 0 4 0 0 15 1 1745.9676 Q92922 Q92922 725 739 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.0038913 100.18 By MS/MS 3 0 1 1 124830 124830 0 15160 2079 16021 38733 30994 30994 1 2284 0 VRELISDNQYR DFLDDEEDQGIYQSKVRELISDNQYRLIVN YQSKVRELISDNQYRLIVNVNDLRRKNEKR K V R Y R L 0 2 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 11 1 1391.7157 P25205 P25205 36 46 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0063199 136.96 By MS/MS 4 0 1 1 886050 886050 0 15161 719 16022 38734 30995 30995 1 83383 0 VRELYAAAR SQVVGMGRGLLNYPRVRELYAAARRVLGYD LLNYPRVRELYAAARRVLGYDLLELSLHGP R V R A R R 3 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 1 1047.5825 Q8IVS2 Q8IVS2 87 95 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.029017 107.69 By MS/MS 7 0 1 1 432760 432760 0 15162 1863 16023 38735 30996 30996 1 6793.6 0 VREYELR VRGAKAEEILEKGLKVREYELRKNNFSDTG EILEKGLKVREYELRKNNFSDTGNFGFGIQ K V R L R K 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 1 963.51378 P62913 P62913 89 95 RPL11 60S ribosomal protein L11 yes yes 3 0.0044384 153.71 By MS/MS 9 0 1 1 1621400 1621400 0 15163 1186 16024 38736 30997 30997 1 31909 0 VREYELRK VRGAKAEEILEKGLKVREYELRKNNFSDTG ILEKGLKVREYELRKNNFSDTGNFGFGIQE K V R R K N 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 8 2 1091.6087 P62913 P62913 89 96 RPL11 60S ribosomal protein L11 yes yes 3 0.022057 104.01 By MS/MS 9 0 1 1 2635600 2635600 0 15164 1186 16025 38737 30998 30998 1 51870 0 VRLGDVISIQPCPDVK DEKIRMNRVVRNNLRVRLGDVISIQPCPDV RLGDVISIQPCPDVKYGKRIHVLPIDDTVE R V R V K Y 0 1 0 2 1 1 0 1 0 2 1 1 0 0 2 1 0 0 0 3 0 0 16 1 1794.9662 P55072 P55072 94 109 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.017651 77.24 By MS/MS 4 0 1 1 994580 994580 0 15165 1054 16026 38738 30999 30999 1 93597 0 VRMNVLADALK ______________________________ ______________________________ M V R L K S 2 1 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 11 1 1228.6962 P62244 P62244 2 12 RPS15A 40S ribosomal protein S15a yes yes 2;3 0.022371 105.17 By MS/MS 10 0 2 2 6723600 6723600 0 15166 1144 16027;16028 38739;38740 31000;31001 31001 647 2 362380 0 VRNATDAVGIVLK KGSPLGEVVEQGITRVRNATDAVGIVLKEL TRVRNATDAVGIVLKELKRQSSLGMFHLLV R V R L K E 2 1 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 3 0 0 13 1 1354.7932 P51398 P51398 233 245 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2;3 0.021214 136.27 By MS/MS 7.33 0.471 2 1 3 4909700 4909700 0 15167 993 16029 38741;38742;38743 31002;31003 31003 2 76066 0 VRNLFNVVDCK ARVTLMQLPTRQEIRVRNLFNVVDCKLHWQ QEIRVRNLFNVVDCKLHWQKNGDYLCVKVD R V R C K L 0 1 2 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 3 0 0 11 1 1362.7078 P55884 P55884 506 516 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0013115 164.66 By MS/MS 5 0.816 1 1 1 3 5690900 5690900 0 15168 1065 16030 38744;38745;38746 31004 31004 1 355180 0 VRPCVVYGGADIGQQIR VQIYEEARKFSYRSRVRPCVVYGGADIGQQ PCVVYGGADIGQQIRDLERGCHLLVATPGR R V R I R D 1 2 0 1 1 2 0 3 0 2 0 0 0 0 1 0 0 0 1 3 0 0 17 1 1886.9785 O00571;O15523 O00571 295 311 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 2.7303E-16 207.4 By MS/MS 6 0.894 2 1 2 5 8779100 8779100 0 15169 116 16031 38747;38748;38749;38750;38751 31005;31006;31007 31006 3 85790 0 VRPDYTAQNLDHGK WLWQHDEPCYWRLTRVRPDYTAQNLDHGKA RVRPDYTAQNLDHGKAWGILTFKGKTESEA R V R G K A 1 1 1 2 0 1 0 1 1 0 1 1 0 0 1 0 1 0 1 1 0 0 14 1 1612.7958 P82930 P82930 100 113 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 3;4 0.00028616 152.88 By MS/MS 8.33 0.471 2 1 3 7246800 7246800 0 15170 1237 16032 38752;38753;38754 31008;31009;31010 31010 3 93867 0 VRPSTGNSASTPQSQCLPSEIEVK TMALQQKKALSKTSKVRPSTGNSASTPQSQ STPQSQCLPSEIEVKYKMAECYTMLKQDKD K V R V K Y 1 1 1 0 1 2 2 1 0 1 1 1 0 0 3 5 2 0 0 2 0 0 24 1 2571.2599 Q9UJX3 Q9UJX3 116 139 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 3 9.4167E-09 176.88 By MS/MS 5 0 1 1 1851400 1851400 0 15171 2752 16033 38755 31011 31011 1 18569 0 VRQQAADLISR ICGTVLWRLNNKSAKVRQQAADLISRTAVV KSAKVRQQAADLISRTAVVMKTCQEEKLMG K V R S R T 2 2 0 1 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 1 1255.6997 O75533 O75533 947 957 SF3B1 Splicing factor 3B subunit 1 yes yes 2 7.729E-05 167.93 By MS/MS 3 0 1 1 351650 351650 0 15172 332 16034 38756 31012 31012 1 6434.1 0 VRQTQVNEATK LGFSLGHLGKSGSGRVRQTQVNEATKARIS GSGRVRQTQVNEATKARISKTLQRTLQKQS R V R T K A 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 2 0 0 2 0 0 11 1 1272.6786 Q8WWY3 Q8WWY3 407 417 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.0044379 123.62 By MS/MS By matching 6 0 2 1 1 385970 341360 44615 15173 2037 16035 38757;38758 31013 31013 1 2346.6 45718 VRTEEREQIK LLTPLNLQIDPSIQRVRTEEREQIKTLNNK PSIQRVRTEEREQIKTLNNKFASFIDKVRF R V R I K T 0 2 0 0 0 1 3 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 10 2 1286.6943 CON__P13647;P13647;CON__Q922U2 CON__P13647 164 173 KRT5 Keratin, type II cytoskeletal 5 no no 2;3;4 3.4857E-08 163.16 By MS/MS By MS/MS 5.19 2.74 3 2 3 4 3 4 2 2 1 3 10 17 44994000 15319000 29675000 + 15174 52;74 16036 38759;38760;38761;38762;38763;38764;38765;38766;38767;38768;38769;38770;38771;38772;38773;38774;38775;38776;38777;38778;38779;38780;38781;38782;38783;38784;38785 31014;31015;31016;31017;31018;31019;31020;31021;31022;31023;31024;31025;31026;31027;31028;31029;31030;31031;31032;31033;31034;31035 31019 22 1030700 11243000 VRVDSTAK NTGMDTDKIKIFGSRVRVDSTAKVAEIEHA IKIFGSRVRVDSTAKVAEIEHAEKEKMKEK R V R A K V 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 8 1 874.48723 P78371 P78371 256 263 CCT2 T-complex protein 1 subunit beta yes yes 2 0.050921 110.41 By MS/MS 6.5 1.12 1 1 1 1 4 32407000 32407000 0 15175 1222 16037 38786;38787;38788;38789 31036 31036 1 243900 0 VRYSLDPENPTK ______________________________ ______________________________ M V R T K S 0 1 1 1 0 0 1 0 0 0 1 1 0 0 2 1 1 0 1 1 0 0 12 1 1417.7201 P18621 P18621 2 13 RPL17 60S ribosomal protein L17 yes yes 2 0.0058984 145.28 By MS/MS 9 0 1 1 1788500 1788500 0 15176 654 16038 38790 31037 31037 1 35197 0 VSADNTVGR LSTVLQYAEDVLSGKVSADNTVGRFLMSLV DVLSGKVSADNTVGRFLMSLVNQVPKIVPD K V S G R F 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 9 0 917.45666 O00303 O00303 298 306 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 6.7206E-07 187.22 By MS/MS By MS/MS 6.8 0.748 2 2 1 3 2 55087000 54943000 143960 15177 99 16039 38791;38792;38793;38794;38795 31038;31039;31040;31041 31040 4 585640 191590 VSAEAVTTTLHQVTR HQLSQVLHRLSLLERVSAEAVTTTLHQVTR VSAEAVTTTLHQVTRERMEDRCRGEYERSF R V S T R E 2 1 0 0 0 1 1 0 1 0 1 0 0 0 0 1 4 0 0 3 0 0 15 0 1611.858 Q9UJX6 Q9UJX6 256 270 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2;3 0.00046494 149.41 By MS/MS 4 0 2 2 2767100 2767100 0 15178 2754 16040 38796;38797 31042;31043 31043 2 260410 0 VSAEKVNK GDMVEYSLSKGKGNKVSAEKVNKTHSVNGI SKGKGNKVSAEKVNKTHSVNGITEEADPTI K V S N K T 1 0 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 0 2 0 0 8 1 873.49198 O75534 O75534 574 581 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.014732 129.68 By MS/MS 4 0 1 1 0 0 0 15179 333 16041 38798 31044 31044 1 0 0 VSALDLAVLDQVEAR QGACLMETVELLQAKVSALDLAVLDQVEAR VSALDLAVLDQVEARLQSVLGKVNEIAKHK K V S A R L 3 1 0 2 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 3 0 0 15 0 1597.8675 Q13561 Q13561 268 282 DCTN2 Dynactin subunit 2 yes yes 2;3 7.5386E-24 279.75 By MS/MS 6.75 0.829 2 1 1 4 12089000 12089000 0 15180 1397 16042 38799;38800;38801;38802 31045;31046 31045 2 84038 0 VSALNSVHCEHVEDEGESR KGYRYLYLTPQDYKRVSALNSVHCEHVEDE NSVHCEHVEDEGESRYKITDIIGKEEGIGP R V S S R Y 1 1 1 1 1 0 4 1 2 0 1 0 0 0 0 3 0 0 0 3 0 0 19 0 2152.9444 Q13085 Q13085 1761 1779 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 3 0.040691 63.546 By MS/MS 1 0 1 1 80884 80884 0 15181 1351 16043 38803 31047 31047 1 19490 0 VSALNVLR KIRLQVAGEITTGPRVSALNVLRDLGIFGL EITTGPRVSALNVLRDLGIFGLYKGAKACF R V S L R D 1 1 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 8 0 870.5287 O75746 O75746 466 473 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0021885 141.39 By MS/MS 5 0 1 1 4312500 4312500 0 15182 344 16044 38804 31048 31048 1 43252 0 VSALPVVDEK TTPVYVALGIFVQHRVSALPVVDEKGRVVD FVQHRVSALPVVDEKGRVVDIYSKFDVINL R V S E K G 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 3 0 0 10 0 1055.5863 P54619 P54619 225 234 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 0.050012 72.325 By MS/MS 7 0 1 1 2674900 2674900 0 15183 1044 16045 38805 31049 31049 1 41991 0 VSALSVVR KIRLQVAGEITTGPRVSALSVVRDLGFFGI EITTGPRVSALSVVRDLGFFGIYKGAKACF R V S V R D 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 3 0 0 8 0 829.50215 Q9UJS0 Q9UJS0 468 475 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00022938 169.06 By MS/MS 6.5 1.5 1 1 2 26746000 26746000 0 15184 2748 16046 38806;38807 31050;31051 31050 2 273080 0 VSAPGVLTAQDR GQEEMEASSSQDQSKVSAPGVLTAQDRVVG QSKVSAPGVLTAQDRVVGKPAQLGTQRSQE K V S D R V 2 1 0 1 0 1 0 1 0 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1212.6463 Q9C0C2 Q9C0C2 812 823 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0056346 101.71 By MS/MS 2 0 1 1 655780 655780 0 15185 2390 16047 38808 31052 31052 1 221810 0 VSASPLLYTLIEK YINLDKAVLGTSNFKVSASPLLYTLIEKTM FKVSASPLLYTLIEKTMQNVKHPVTGQFLY K V S E K T 1 0 0 0 0 0 1 0 0 1 3 1 0 0 1 2 1 0 1 1 0 0 13 0 1432.8177 P02786 P02786 496 508 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 6.3226E-07 203.03 By MS/MS 5.5 1.12 1 1 1 1 4 1723900 1723900 0 15186 458 16048 38809;38810;38811;38812 31053;31054;31055;31056;31057 31053 4 116190 0 VSAWEEVQQR CGLRILFRMYMDESRVSAWEEVQQRLLNVC MDESRVSAWEEVQQRLLNVCSEALSYFLTL R V S Q R L 1 1 0 0 0 2 2 0 0 0 0 0 0 0 0 1 0 1 0 2 0 0 10 0 1230.5993 Q9Y6D6 Q9Y6D6 1744 1753 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.00046342 133.99 By MS/MS 2 0 1 1 281350 281350 0 15187 2941 16049 38813 31058 31058 1 95163 0 VSCLETVWVSR DSGLHKEERYDLKTKVSCLETVWVSRANVI LKTKVSCLETVWVSRANVIQRRGRAGRCQS K V S S R A 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 0 3 0 0 11 0 1334.6653 Q7L2E3 Q7L2E3 763 773 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 4.7537E-05 156.48 By MS/MS 4 0.816 1 1 1 3 1022700 1022700 0 15188 1761 16050 38814;38815;38816 31059 31059 1 40249 0 VSDGGSSSTDFK VSISPTTKGSKSPAKVSDGGSSSTDFKMVS PAKVSDGGSSSTDFKMVSSGLTENQLQLSV K V S F K M 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 4 1 0 0 1 0 0 12 0 1185.515 Q7Z6Z7 Q7Z6Z7 3559 3570 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0026656 110.38 By MS/MS 1 0 1 1 94301 94301 0 15189 1802 16051 38817 31060 31060 1 22724 0 VSDSLTDLALK LNVTQASLSAQVNTKVSDSLTDLALK____ VNTKVSDSLTDLALK_______________ K V S L K - 1 0 0 2 0 0 0 0 0 0 3 1 0 0 0 2 1 0 0 1 0 0 11 0 1160.6289 Q8N3C0 Q8N3C0 2192 2202 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 8.2167E-06 174.86 By MS/MS 1.5 0.5 1 1 2 370790 370790 0 15190 1911 16052 38818;38819 31061;31062 31061 2 89349 0 VSEAEFLAR GQTQIPNPLLKDILRVSEAEFLARTACTSV LKDILRVSEAEFLARTACTSVEEFQVFKKL R V S A R T 2 1 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 9 0 1020.524 Q7Z6M4 Q7Z6M4 296 304 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 1.4026E-10 214.25 By MS/MS 7 0 1 1 1771900 1771900 0 15191 1801 16053 38820 31063 31063 1 27815 0 VSEAYENLVK EKVARLQKVETEIQRVSEAYENLVKSSSKR TEIQRVSEAYENLVKSSSKREALEKAMRNK R V S V K S 1 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1150.587 Q4VCS5 Q4VCS5 472 481 AMOT Angiomotin yes yes 2 0.0047276 106.2 By MS/MS 3.5 0.5 1 1 2 1057700 1057700 0 15192 1584 16054 38821;38822 31064;31065 31064 2 58436 0 VSEEGPAAR STPYKGDDEGIFISRVSEEGPAARAGVRVG GIFISRVSEEGPAARAGVRVGDKLLEVNGV R V S A R A 2 1 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 914.44576 Q14160 Q14160 763 771 SCRIB Protein scribble homolog yes yes 2 0.00078147 122.18 By MS/MS 2 0 1 1 215120 215120 0 15193 1425 16055 38823 31066 31066 1 72762 0 VSEEIEDIIK QEKLKAIEPNDYTGKVSEEIEDIIKKGETQ DYTGKVSEEIEDIIKKGETQTL________ K V S I K K 0 0 0 1 0 0 3 0 0 3 0 1 0 0 0 1 0 0 0 1 0 0 10 0 1173.6129 O75223 O75223 172 181 GGCT Gamma-glutamylcyclotransferase yes yes 2 0.0044199 120.31 By matching By MS/MS 7 2.83 1 2 1 2 332960 184110 148850 15194 306 16056 38824;38825;38826 31067;31068 31068 2 3623.4 178030 VSEEIFFGR KEQLLDRMCMTLGGRVSEEIFFGRITTGAQ MTLGGRVSEEIFFGRITTGAQDDLRKVTQS R V S G R I 0 1 0 0 0 0 2 1 0 1 0 0 0 2 0 1 0 0 0 1 0 0 9 0 1082.5397 Q9Y4W6 Q9Y4W6 633 641 AFG3L2 AFG3-like protein 2 yes yes 2 7.4142E-07 185.55 By MS/MS 6.67 1.25 1 1 1 3 5333500 5333500 0 15195 2902 16057 38827;38828;38829 31069;31070 31069 2 56067 0 VSEKEKESIAR DFSAALNNFQAVQRRVSEKEKESIARARAG VQRRVSEKEKESIARARAGSRLSAEERQRE R V S A R A 1 1 0 0 0 0 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 11 2 1274.683 Q86Y82 Q86Y82 124 134 STX12 Syntaxin-12 yes yes 3 0.019238 84.31 By MS/MS By matching 7 0 2 1 1 977290 965110 12176 15196 1851 16058 38830;38831 31071 31071 1 15151 21929 VSEQGLIEILK NYLIQMARYGQLSEKVSEQGLIEILKKVSQ LSEKVSEQGLIEILKKVSQQTEKTTTVKFN K V S L K K 0 0 0 0 0 1 2 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1227.7075 O14737 O14737 87 97 PDCD5 Programmed cell death protein 5 yes yes 2 2.6192E-06 180.09 By MS/MS 10 0 1 1 296320 296320 0 15197 136 16059 38832 31072 31072 1 15970 0 VSFELFADK TVFFDIAVDGEPLGRVSFELFADKVPKTAE GEPLGRVSFELFADKVPKTAENFRALSTGE R V S D K V 1 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 1054.5335 P62937 P62937 20 28 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00049743 146.79 By MS/MS 10 0 1 1 358060 358060 0 15198 1188 16060 38833 31073 31073 1 19298 0 VSFELFADKVPK TVFFDIAVDGEPLGRVSFELFADKVPKTAE LGRVSFELFADKVPKTAENFRALSTGEKGF R V S P K T 1 0 0 1 0 0 1 0 0 0 1 2 0 2 1 1 0 0 0 2 0 0 12 1 1378.7497 P62937 P62937 20 31 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2;3 0.0013426 144.55 By MS/MS 10 0 2 2 3104400 3104400 0 15199 1188 16061 38834;38835 31074;31075 31074 2 167320 0 VSGDDVIIGK YDKLDDDGLIAPGVRVSGDDVIIGKTVTLP APGVRVSGDDVIIGKTVTLPENEDELESTN R V S G K T 0 0 0 2 0 0 0 2 0 2 0 1 0 0 0 1 0 0 0 2 0 0 10 0 1001.5393 P30876 P30876 860 869 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00030328 140.11 By MS/MS 3.5 0.5 1 1 2 3041600 3041600 0 15200 781 16062 38836;38837 31076 31076 1 114330 0 VSGGPSLEQR LILYKELYYRHIYAKVSGGPSLEQRFESYY HIYAKVSGGPSLEQRFESYYNYCNLFNYIL K V S Q R F 0 1 0 0 0 1 1 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1028.5251 Q9Y262 Q9Y262 144 153 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 1.6047E-05 170.5 By MS/MS By MS/MS 4.7 2.1 1 1 1 1 2 2 1 1 8 2 78718000 78099000 618780 15201 2814 16063 38838;38839;38840;38841;38842;38843;38844;38845;38846;38847 31077;31078;31079;31080;31081;31082;31083;31084;31085;31086 31083 10 1105700 565740 VSGHVITDIVEGK QGGTSVVIANGTHPKVSGHVITDIVEGKKV PKVSGHVITDIVEGKKVGTFFSEVKPAGPT K V S G K K 0 0 0 1 0 0 1 2 1 2 0 1 0 0 0 1 1 0 0 3 0 0 13 0 1352.73 P54886 P54886 335 347 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.0001834 161.25 By MS/MS By matching 4.75 0.433 1 3 3 1 31881000 31838000 42607 15202 1048 16064 38848;38849;38850;38851 31087;31088 31088 2 375190 35780 VSGHVITDIVEGKK QGGTSVVIANGTHPKVSGHVITDIVEGKKV KVSGHVITDIVEGKKVGTFFSEVKPAGPTV K V S K K V 0 0 0 1 0 0 1 2 1 2 0 2 0 0 0 1 1 0 0 3 0 0 14 1 1480.8249 P54886 P54886 335 348 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.00033506 157.33 By MS/MS 5 0 1 1 5252800 5252800 0 15203 1048 16065 38852 31089 31089 1 52682 0 VSGISFPTTELLR SSLWRSSGAPETLQRVSGISFPTTELLRVW QRVSGISFPTTELLRVWEAWREEAELRDHR R V S L R V 0 1 0 0 0 0 1 1 0 1 2 0 0 1 1 2 2 0 0 1 0 0 13 0 1418.7769 Q9BW92 Q9BW92 276 288 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 1.5776E-11 234.9 By MS/MS 5.5 1.12 1 1 1 1 4 9164100 9164100 0 15204 2346 16066 38853;38854;38855;38856 31090;31091;31092;31093;31094 31092 5 110610 0 VSGNVEKK FGMVLEKIIIPEIQKVSGNVEKKICAVGIT IIPEIQKVSGNVEKKICAVGITKLLTECPP K V S K K I 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 2 0 0 8 1 859.47633 P55060 P55060 833 840 CSE1L Exportin-2 yes yes 2 0.010228 134.81 By MS/MS 4 0 1 1 382970 382970 0 15205 1053 16067 38857 31095 31095 1 36040 0 VSGQVQALQNHYR LSARTFSRHVVQRQRVSGQVQALQNHYRKY QRVSGQVQALQNHYRKYLCLLASDAEVPEP R V S Y R K 1 1 1 0 0 3 0 1 1 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1498.7641 O00411 O00411 519 531 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.036246 72.289 By MS/MS 3 0 1 1 663380 663380 0 15206 104 16068 38858 31096 31096 1 12138 0 VSGSELVQK LARAVAHHTDCTFIRVSGSELVQKFIGEGA DCTFIRVSGSELVQKFIGEGARMVRELFVM R V S Q K F 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 9 0 945.51311 P62195 P62195 214 222 PSMC5 26S protease regulatory subunit 8 yes yes 2 5.3639E-06 180.03 By MS/MS By matching 7.33 0.471 2 1 2 1 11179000 11150000 28744 15207 1142 16069 38859;38860;38861 31097 31097 1 168590 51767 VSGSINMLSLTQGLFR ITICRLIGIKDMYAKVSGSINMLSLTQGLF SGSINMLSLTQGLFRGLSRQETHQQLADKK K V S F R G 0 1 1 0 0 1 0 2 0 1 3 0 1 1 0 3 1 0 0 1 0 0 16 0 1721.9134 P82675 P82675 336 351 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.00037532 143.94 By MS/MS 7 0 1 1 97016 97016 0 15208 1233 16070 38862 31098 31098 744 1 1523 0 VSGVDGYETEGIR SKLSTPGARAETNSRVSGVDGYETEGIRGL SRVSGVDGYETEGIRGLRALGVRDLSYRLV R V S I R G 0 1 0 1 0 0 2 3 0 1 0 0 0 0 0 1 1 0 1 2 0 0 13 0 1380.6521 Q14566 Q14566 270 282 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.000323 149.94 By MS/MS 4 0 1 1 2333800 2333800 0 15209 1444 16071 38863 31099 31099 1 219620 0 VSHELGPSLR ITQPRRISAVSVAQRVSHELGPSLRRNVGF SVAQRVSHELGPSLRRNVGFQVRLESKPPS R V S L R R 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 2 0 0 0 1 0 0 10 0 1093.588 Q7L2E3 Q7L2E3 503 512 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 0.008995 84.817 By MS/MS 3 0 1 1 474720 474720 0 15210 1761 16072 38864 31100 31100 1 8686 0 VSHLLGINVTDFTR NTDQASMPDNTAAQKVSHLLGINVTDFTRG KVSHLLGINVTDFTRGILTPRIKVGRDYVQ K V S T R G 0 1 1 1 0 0 0 1 1 1 2 0 0 1 0 1 2 0 0 2 0 0 14 0 1570.8467 P35579 P35579 374 387 MYH9 Myosin-9 yes yes 3 0.016015 85.287 By MS/MS 2 0 1 1 156230 156230 0 15211 824 16073 38865 31101 31101 1 52844 0 VSIAPSQR KPSEDMESNTFFDPRVSIAPSQRQRRTFKF NTFFDPRVSIAPSQRQRRTFKFHDKGKFEK R V S Q R Q 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 8 0 856.47667 O43395 O43395 315 322 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.048086 83.206 By MS/MS 3.5 0.5 1 1 2 1274200 1274200 0 15212 206 16074 38866;38867 31102 31102 1 95805 0 VSILESLDK STLRKRKMYEEFLSKVSILESLDKWERLTV EEFLSKVSILESLDKWERLTVADALEPVQF K V S D K W 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 1 0 0 9 0 1002.5597 P10644 P10644 253 261 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 0.00094065 134.77 By MS/MS 6 0 1 1 937050 937050 0 15213 567 16075 38868 31103 31103 1 6441.5 0 VSILESLDKWER STLRKRKMYEEFLSKVSILESLDKWERLTV LSKVSILESLDKWERLTVADALEPVQFEDG K V S E R L 0 1 0 1 0 0 2 0 0 1 2 1 0 0 0 2 0 1 0 1 0 0 12 1 1473.7827 P10644 P10644 253 264 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2;3 0.00043047 131.12 By MS/MS 6 0 2 2 4249200 4249200 0 15214 567 16076 38869;38870 31104;31105 31104 2 29210 0 VSILPDVVFDSPLH FKLPKEYSWPEKKLKVSILPDVVFDSPLH_ KVSILPDVVFDSPLH_______________ K V S L H - 0 0 0 2 0 0 0 0 1 1 2 0 0 1 2 2 0 0 0 3 0 0 14 0 1536.8188 Q9UMX1 Q9UMX1 471 484 SUFU Suppressor of fused homolog yes yes 2 0.0007106 130.41 By MS/MS 6 0 1 1 190000 190000 0 15215 2783 16077 38871 31106 31106 1 1306.1 0 VSIQFER LLEMLIQLPANSVTKVSIQFERALLKWTEY LPANSVTKVSIQFERALLKWTEYTPDPNHG K V S E R A 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 7 0 877.46577 Q969N2 Q969N2 442 448 PIGT GPI transamidase component PIG-T yes yes 2 0.016414 118.74 By MS/MS 6 0.816 1 1 1 3 6450300 6450300 0 15216 2093 16078 38872;38873;38874 31107 31107 1 62810 0 VSISEGDDKIEYR TKNLVPGESVYGEKRVSISEGDDKIEYRAW KRVSISEGDDKIEYRAWNPFRSKLAAAILG R V S Y R A 0 1 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 13 1 1509.7311 P22087 P22087 123 135 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3 0.020866 77.597 By MS/MS 7 0 1 1 1616100 1616100 0 15217 687 16079 38875 31108 31108 1 25369 0 VSKPTDSKAER PDSVPPEELKPYHIRVSKPTDSKAERAH__ YHIRVSKPTDSKAERAH_____________ R V S E R A 1 1 0 1 0 0 1 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 11 2 1216.6412 Q6PI48 Q6PI48 633 643 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2;3 0.0032972 115.91 By MS/MS 5 0 2 2 907490 907490 0 15218 1717 16080 38876;38877 31109;31110 31110 2 9101.7 0 VSLAGACGVGGYGSR SVSRSGGGGGGGFGRVSLAGACGVGGYGSR VSLAGACGVGGYGSRSLYNLGGSKRISIST R V S S R S 2 1 0 0 1 0 0 5 0 0 1 0 0 0 0 2 0 0 1 2 0 0 15 0 1409.6721 CON__P13647;P13647 CON__P13647 49 63 KRT5 Keratin, type II cytoskeletal 5 yes no 2 1.7097E-15 221.09 By MS/MS By MS/MS 5.31 2.95 2 2 1 2 1 2 2 1 1 2 9 7 48542000 25510000 23032000 + 15219 52 16081 38878;38879;38880;38881;38882;38883;38884;38885;38886;38887;38888;38889;38890;38891;38892;38893 31111;31112;31113;31114;31115;31116;31117;31118;31119;31120;31121;31122;31123;31124;31125;31126;31127;31128;31129 31112 19 1470900 30474000 VSLANLKPNPGSK GGGARALDLLRGLPRVSLANLKPNPGSKKP PRVSLANLKPNPGSKKPERRPRGRRRGRKC R V S S K K 1 0 2 0 0 0 0 1 0 0 2 2 0 0 2 2 0 0 0 1 0 0 13 1 1323.751 Q9P015 Q9P015 22 34 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.0043279 128.36 By MS/MS 8 0 1 1 1485100 1485100 0 15220 2659 16082 38894 31130 31130 1 18750 0 VSLDVNHFAPDELTVK SSGVSEIRHTADRWRVSLDVNHFAPDELTV SLDVNHFAPDELTVKTKDGVVEITGKHEER R V S V K T 1 0 1 2 0 0 1 0 1 0 2 1 0 1 1 1 1 0 0 3 0 0 16 0 1782.9152 P04792 P04792 97 112 HSPB1 Heat shock protein beta-1 yes yes 3 0.020903 79.652 By MS/MS 8 0 1 1 393830 393830 0 15221 477 16083 38895 31131 31131 1 4972 0 VSLEDLYNGK RNGRRRGEDMMHPLKVSLEDLYNGKTTKLQ MHPLKVSLEDLYNGKTTKLQLSKNVLCSAC K V S G K T 0 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1136.5714 O60884 O60884 122 131 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 1.9971E-07 181.41 By MS/MS 7 0 1 1 2041000 2041000 0 15222 285 16084 38896 31132 31132 1 32040 0 VSLEEIYSGCTK PARKKQDPPVTHDLRVSLEEIYSGCTKKMK DLRVSLEEIYSGCTKKMKISHKRLNPDGKS R V S T K K 0 0 0 0 1 0 2 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 12 0 1384.6544 P25685;Q9UDY4 P25685 170 181 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 1;DnaJ homolog subfamily B member 4 yes no 2 5.2413E-05 166.69 By MS/MS 7 0 1 1 1405300 1405300 0 15223 722 16085 38897 31133;31134 31134 2 22060 0 VSLGLDENVSK IADPSPQNSTADTSKVSLGLDENVSKRIEP DTSKVSLGLDENVSKRIEPSVSLWQFYLSK K V S S K R 0 0 1 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 2 0 0 11 0 1159.6085 P04035 P04035 289 299 HMGCR 3-hydroxy-3-methylglutaryl-coenzyme A reductase yes yes 2 0.052559 68.626 By MS/MS 1 0 1 1 134830 134830 0 15224 463 16086 38898 31135 31135 1 32490 0 VSLVGADDLR ELEVRVPQAEGPPKRVSLVGADDLRKMQEE GPPKRVSLVGADDLRKMQEEEARKLQQKRA R V S L R K 1 1 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 10 0 1043.5611 Q14160 Q14160 1377 1386 SCRIB Protein scribble homolog yes yes 2 0.011221 91.584 By MS/MS 2 0 1 1 345370 345370 0 15225 1425 16087 38899 31136 31136 1 116820 0 VSNRFSGVPDR LQQRPGQPPRLLIYKVSNRFSGVPDRFSGS LIYKVSNRFSGVPDRFSGSGAGTDFTLKIS K V S D R F 0 2 1 1 0 0 0 1 0 0 0 0 0 1 1 2 0 0 0 2 0 0 11 1 1232.6262 A0A075B6R9 A0A075B6R9 76 86 IGKV2D-24 yes yes 2;3 1.8525E-05 158.08 By MS/MS By MS/MS 8.69 0.821 1 4 6 2 12 1 142650000 142310000 336320 15226 0 16088 38900;38901;38902;38903;38904;38905;38906;38907;38908;38909;38910;38911;38912 31137;31138;31139;31140;31141;31142;31143;31144;31145;31146;31147;31148 31138 12 2434300 766910 VSNSGITR IDDCELVEGLVLTQKVSNSGITRVEKAKIG GLVLTQKVSNSGITRVEKAKIGLIQFCLSA K V S T R V 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 2 1 0 0 1 0 0 8 0 832.44028 P50991 P50991 233 240 CCT4 T-complex protein 1 subunit delta yes yes 2 1.6801E-06 195.05 By MS/MS 6.5 1.12 1 1 1 1 4 43843000 43843000 0 15227 985 16089 38913;38914;38915;38916 31149;31150;31151 31149 3 344120 0 VSNSGITRVEK IDDCELVEGLVLTQKVSNSGITRVEKAKIG LTQKVSNSGITRVEKAKIGLIQFCLSAPKT K V S E K A 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 2 1 0 0 2 0 0 11 1 1188.6463 P50991 P50991 233 243 CCT4 T-complex protein 1 subunit delta yes yes 2 7.6672E-06 183.85 By MS/MS 6.75 0.829 2 1 1 4 22340000 22340000 0 15228 985 16090 38917;38918;38919;38920 31152;31153;31154 31152 3 178270 0 VSNTLESR IAGGVEIYNGDRKIKVSNTLESRLDLIAQQ NGDRKIKVSNTLESRLDLIAQQMMPEVRGA K V S S R L 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 8 0 904.46141 P36543;Q96A05 P36543 192 199 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 2 0.043857 93.598 By MS/MS 8 0 1 1 1189200 1189200 0 15229 836 16091 38921 31155 31155 1 15013 0 VSNVDHNKR RQMQVLETCVATVGRVSNVDHNKRVIGKAG VATVGRVSNVDHNKRVIGKAGRNRWLGKRP R V S K R V 0 1 2 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 9 1 1067.5472 Q5T653 Q5T653 247 255 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 2 0.0023709 123.86 By MS/MS 8.5 0.5 1 1 2 568350 568350 0 15230 1634 16092 38922;38923 31156 31156 1 7279.8 0 VSPDMAIFITMNPGYAGR TSAPITCELLNKQVKVSPDMAIFITMNPGY DMAIFITMNPGYAGRSNLPDNLKKLFRSLA K V S G R S 2 1 1 1 0 0 0 2 0 2 0 0 2 1 2 1 1 0 1 1 0 0 18 0 1938.9332 Q14204 Q14204 2008 2025 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00081164 108.66 By MS/MS 1.5 0.5 1 1 2 274610 274610 0 15231 1433 16093 38924;38925 31157 31157 844;845 1 76530 0 VSQAAADLK VVQQLRLEAGLNRVKVSQAAADLKQFCLQN GLNRVKVSQAAADLKQFCLQNAQHDPLLTG K V S L K Q 3 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 901.4869 P63218 P63218 28 36 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 2 0.010114 100.25 By MS/MS 10 0 1 1 191020 191020 0 15232 1199 16094 38926 31158 31158 1 10295 0 VSQSPSKDSEENPATEERPEK PEPNTKTRESTSSEKVSQSPSKDSEENPAT KDSEENPATEERPEKILAETQPELGTWGDG K V S E K I 1 1 1 1 0 1 5 0 0 0 0 2 0 0 3 4 1 0 0 1 0 0 21 2 2343.0826 Q9P2W9 Q9P2W9 186 206 STX18 Syntaxin-18 yes yes 3;4 8.2913E-06 174.7 By MS/MS 7 0 2 2 4097600 4097600 0 15233 2691 16095 38927;38928 31159;31160;31161 31161 3 64325 0 VSQWWER YKLTQRQVNITVQKKVSQWWERLTKQEKRP VNITVQKKVSQWWERLTKQEKRPLFLAPDF K V S E R L 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 2 0 1 0 0 7 0 989.47191 Q9P035 Q9P035 86 92 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0068404 148.04 By MS/MS 2 0.816 1 1 1 3 950400 950400 0 15234 2661 16096 38929;38930;38931 31162;31163;31164 31162 3 238550 0 VSSDEDLKLTELLR KVAELFEKLRKVEGRVSSDEDLKLTELLRY RVSSDEDLKLTELLRYYMLNIEAAKDLLYR R V S L R Y 0 1 0 2 0 0 2 0 0 0 4 1 0 0 0 2 1 0 0 1 0 0 14 1 1616.8621 Q9Y5X3 Q9Y5X3 283 296 SNX5 Sorting nexin-5 yes yes 3 0.023543 73.881 By MS/MS 6 0 1 1 870680 870680 0 15235 2927 16097 38932 31165 31165 1 5985.2 0 VSSDNVADLHEK GAVNLYHVREDGWIRVSSDNVADLHEKYSG WIRVSSDNVADLHEKYSGSTP_________ R V S E K Y 1 0 1 2 0 0 1 0 1 0 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1312.6259 P28074 P28074 246 257 PSMB5 Proteasome subunit beta type-5 yes yes 2 3.8466E-06 191.33 By MS/MS 9.5 0.5 1 1 2 2334400 2334400 0 15236 751 16098 38933;38934 31166 31166 1 52115 0 VSSDNVADLHEKYSGSTP GAVNLYHVREDGWIRVSSDNVADLHEKYSG DNVADLHEKYSGSTP_______________ R V S T P - 1 0 1 2 0 0 1 1 1 0 1 1 0 0 1 4 1 0 1 2 0 0 18 1 1904.8752 P28074 P28074 246 263 PSMB5 Proteasome subunit beta type-5 yes yes 2;3 0.00041932 183.06 By MS/MS 9.33 0.471 2 1 3 3686400 3686400 0 15237 751 16099 38935;38936;38937 31167;31168;31169 31169 3 78481 0 VSSDVIDQK SDLIDQKVYELQASRVSSDVIDQKVYEIQD ELQASRVSSDVIDQKVYEIQDIYENSWTKL R V S Q K V 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 2 0 0 9 0 989.50294 Q9Y262 Q9Y262 79 87 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 7.344E-07 185.72 By MS/MS By MS/MS 6 2 1 2 2 1 1 1 6 2 19523000 18636000 886980 15238 2814 16100 38938;38939;38940;38941;38942;38943;38944;38945 31170;31171;31172;31173;31174;31175 31175 6 180300 815620 VSSGYVPPPVATPFSSK SLLDDMTKNDPFKARVSSGYVPPPVATPFS SGYVPPPVATPFSSKSSTKPAAGGTAPLPP R V S S K S 1 0 0 0 0 0 0 1 0 0 0 1 0 1 4 4 1 0 1 3 0 0 17 0 1718.8879 Q15942 Q15942 168 184 ZYX Zyxin yes yes 2 0.0024207 108.72 By MS/MS 5 0 1 1 3248000 3248000 0 15239 1541 16101 38946 31176 31176 1 32576 0 VSSLQAEPLPR LQTLLHSKGNTQTSKVSSLQAEPLPRLSVK QTSKVSSLQAEPLPRLSVKKLLEGGKGGIA K V S P R L 1 1 0 0 0 1 1 0 0 0 2 0 0 0 2 2 0 0 0 1 0 0 11 0 1195.6561 Q9H2M9 Q9H2M9 914 924 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 2.1225E-09 199.68 By MS/MS 3 0 1 1 2325300 2325300 0 15240 2431 16102 38947 31177 31177 1 42547 0 VSSQNLVAIPVYVK SFIPPDGNFRLISYRVSSQNLVAIPVYVKH RVSSQNLVAIPVYVKHSISFKENSSCGRFD R V S V K H 1 0 1 0 0 1 0 0 0 1 1 1 0 0 1 2 0 0 1 4 0 0 14 0 1515.8661 Q9Y2T2 Q9Y2T2 264 277 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.00046893 172.13 By MS/MS 7 0 1 1 1686800 1686800 0 15241 2843 16103 38948 31178 31178 1 26479 0 VSSTATTQDVIETLAEK FQDKAAGNFATKCIRVSSTATTQDVIETLA STATTQDVIETLAEKFRPDMRMLSSPKYSL R V S E K F 2 0 0 1 0 1 2 0 0 1 1 1 0 0 0 2 4 0 0 2 0 0 17 0 1791.9102 P55196 P55196 62 78 MLLT4 Afadin yes yes 2 2.6548E-11 241.76 By MS/MS 3 1 1 1 2 209140 209140 0 15242 1057 16104 38949;38950 31179;31180 31179 2 70740 0 VSSVFKDEATVR TDTSDPEKVVSAFLKVSSVFKDEATVRMAV FLKVSSVFKDEATVRMAVQDAVDALMQKAF K V S V R M 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 2 1 0 0 3 0 0 12 1 1336.6987 P46060 P46060 476 487 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.000251 167.2 By MS/MS 5.5 1.12 1 1 1 1 4 4231600 4231600 0 15243 908 16105 38951;38952;38953;38954 31181 31181 1 99841 0 VSTAVLSITAK YPAPLEVPKEKEKEKVSTAVLSITAKAKKK EKEKVSTAVLSITAKAKKKEKEKEKKEEEK K V S A K A 2 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 2 0 0 2 0 0 11 0 1088.6441 Q99460 Q99460 828 838 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 6.3942E-07 195.36 By MS/MS 4.5 0.5 1 1 2 5107300 5107300 0 15244 2246 16106 38955;38956 31182 31182 1 469110 0 VSTVFWK KKPPKPQLMANYYNKVSTVFWKSGNALFHA LMANYYNKVSTVFWKSGNALFHASTLHRLY K V S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 1 0 2 0 0 7 0 865.46979 Q14152 Q14152 279 285 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.017677 115.46 By MS/MS 3 1.41 1 1 1 1 1 5 13073000 13073000 0 15245 1422 16107 38957;38958;38959;38960;38961 31183;31184 31183 2 447810 0 VSVADHSLHLSK HFYAGGQVYPGEASRVSVADHSLHLSKAKI ASRVSVADHSLHLSKAKISKPAPYWEGTAV R V S S K A 1 0 0 1 0 0 0 0 2 0 2 1 0 0 0 3 0 0 0 2 0 0 12 0 1291.6884 Q13162 Q13162 67 78 PRDX4 Peroxiredoxin-4 yes yes 3 0.039618 71.241 By MS/MS 8 0 1 1 1148700 1148700 0 15246 1361 16108 38962 31185 31185 1 14502 0 VSVELTNSLFK LFRISEDKNPDYRKRVSVELTNSLFKHDPA YRKRVSVELTNSLFKHDPAAWEAAQSMIPI R V S F K H 0 0 1 0 0 0 1 0 0 0 2 1 0 1 0 2 1 0 0 2 0 0 11 0 1235.6762 P14923 P14923 664 674 JUP Junction plakoglobin yes yes 2 8.4819E-21 250.92 By MS/MS 3 0 1 1 869090 0 869090 15247 621 16109 38963 31186 31186 1 0 110620 VSVGEFVGEGEGK ARESGPPHMKNFVTKVSVGEFVGEGEGKSK TKVSVGEFVGEGEGKSKKISKKNAAIAVLE K V S G K S 0 0 0 0 0 0 3 4 0 0 0 1 0 1 0 1 0 0 0 3 0 0 13 0 1292.6248 O95793 O95793 220 232 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 0.00014383 168.85 By MS/MS 5.5 0.5 1 1 2 2054800 2054800 0 15248 426 16110 38964;38965 31187 31187 1 15231 0 VSVHVIEGDHR DLGADYNLSQVCDGKVSVHVIEGDHRTLLE CDGKVSVHVIEGDHRTLLEGSGLESIISII K V S H R T 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 1 0 0 0 3 0 0 11 0 1246.6418 P49327 P49327 2472 2482 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.025188 97.734 By MS/MS 2.5 0.5 2 2 4 2762800 2762800 0 15249 946 16111 38966;38967;38968;38969 31188;31189;31190 31189 3 416550 0 VSVIQDFVK LTASLQCNSTAQTEKVSVIQDFVKMCLEAN TAQTEKVSVIQDFVKMCLEANIPLEKADHP K V S V K M 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 3 0 0 9 0 1033.5808 Q9UFW8 Q9UFW8 101 109 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.037112 81.525 By MS/MS 9 0 1 1 319960 319960 0 15250 2716 16112 38970 31191 31191 1 6296.9 0 VSVQRTQAPAVATT PYQEFTDHLVKTHTRVSVQRTQAPAVATT_ RVSVQRTQAPAVATT_______________ R V S T T - 3 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 3 0 0 3 0 0 14 1 1427.7732 P15880 P15880 280 293 RPS2 40S ribosomal protein S2 yes yes 2 0.038124 96.334 By MS/MS 8 0 1 1 755050 755050 0 15251 627 16113 38971 31192 31192 1 9532.4 0 VSWRPPADDGGADILGYILER EGPLEYDDIQVRSVRVSWRPPADDGGADIL ADDGGADILGYILERREVPKAAWYTIDSRV R V S E R R 2 2 0 3 0 0 1 3 0 2 2 0 0 0 2 1 0 1 1 1 0 0 21 1 2299.1597 Q8WZ42 Q8WZ42 31174 31194 TTN Titin yes yes 3 0.033863 59.512 By MS/MS 2 0 1 1 210670 0 210670 15252 2044 16114 38972 31193 31193 1 0 297930 VSYIPDEQIAQGPENGR IMKLNGHQLENHALKVSYIPDEQIAQGPEN YIPDEQIAQGPENGRRGGFGSRGQPRQGSP K V S G R R 1 1 1 1 0 2 2 2 0 2 0 0 0 0 2 1 0 0 1 1 0 0 17 0 1871.9014 Q9NZI8 Q9NZI8 151 167 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.00011467 186.51 By MS/MS 5 0 1 1 1300100 1300100 0 15253 2649 16115 38973 31194 31194 1 13040 0 VSYLPFTEAFDR EAARRLEVAMYPFKKVSYLPFTEAFDRAKA FKKVSYLPFTEAFDRAKAENKLVHSILLWG K V S D R A 1 1 0 1 0 0 1 0 0 0 1 0 0 2 1 1 1 0 1 1 0 0 12 0 1443.7034 Q9NZV5 Q9NZV5 428 439 SEPN1 Selenoprotein N yes yes 2 0.0081512 94.363 By MS/MS 5 0 1 1 173020 173020 0 15254 2656 16116 38974 31195 31195 1 1735.3 0 VTAADAFLDLIR KGTKENMHREGKIVRVTAADAFLDLIRNMF IVRVTAADAFLDLIRNMFPPNLVEACFKQF R V T I R N 3 1 0 2 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 0 12 0 1303.7136 P43003 P43003 164 175 SLC1A3 Excitatory amino acid transporter 1 yes yes 2 0.0038146 107.03 By MS/MS 5.5 0.5 1 1 2 223820 223820 0 15255 892 16117 38975;38976 31196 31196 1 1675.1 0 VTADGVIALTR VKLVVLGSSQESNSKVTADGVIALTRAFLA SNSKVTADGVIALTRAFLAAGAQCVLVSLW K V T T R A 2 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 2 0 0 2 0 0 11 0 1114.6346 Q96AY4 Q96AY4 1633 1643 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 2.5777E-05 158.47 By MS/MS 3.5 1.12 1 1 1 1 4 750770 750770 0 15256 2110 16118 38977;38978;38979;38980 31197 31197 1 92842 0 VTADVINAAEK ELQDCEGLIVRSATKVTADVINAAEKLQVV SATKVTADVINAAEKLQVVGRAGTGVDNVD K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1129.5979 O43175 O43175 59 69 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00025619 152.69 By MS/MS By matching 6 0 2 1 1 10719000 10603000 115740 15257 195 16119 38981;38982 31198 31198 1 72888 118600 VTADVINAAEKLQVVGR ELQDCEGLIVRSATKVTADVINAAEKLQVV ADVINAAEKLQVVGRAGTGVDNVDLEAATR K V T G R A 3 1 1 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 4 0 0 17 1 1781.9999 O43175 O43175 59 75 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 0.0017485 170.26 By MS/MS 6 0 2 2 10839000 10839000 0 15258 195 16120 38983;38984 31199;31200 31200 2 74511 0 VTAEDKGTGNK QIEVTFEIDVNGILRVTAEDKGTGNKNKIT GILRVTAEDKGTGNKNKITITNDQNRLTPE R V T N K N 1 0 1 1 0 0 1 2 0 0 0 2 0 0 0 0 2 0 0 1 0 0 11 1 1118.5568 P11021 P11021 511 521 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 5.0506E-06 169.93 By MS/MS 5 0 2 2 607050 607050 0 15259 571 16121 38985;38986 31201;31202 31201 2 6088.4 0 VTAEDKGTGNKNK QIEVTFEIDVNGILRVTAEDKGTGNKNKIT LRVTAEDKGTGNKNKITITNDQNRLTPEEI R V T N K I 1 0 2 1 0 0 1 2 0 0 0 3 0 0 0 0 2 0 0 1 0 0 13 2 1360.6947 P11021 P11021 511 523 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0034038 136.96 By MS/MS 5.5 0.5 1 1 2 268870 268870 0 15260 571 16122 38987;38988 31203 31203 1 2637.8 0 VTAEVVLAHLGGGSTSR EDVKRTVDLSSHLAKVTAEVVLAHLGGGST AEVVLAHLGGGSTSRATSFLLALEPELEAR K V T S R A 2 1 0 0 0 0 1 3 1 0 2 0 0 0 0 2 2 0 0 3 0 0 17 0 1652.8846 P04843 P04843 49 65 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.0046117 151.38 By MS/MS 5 0 1 1 5628700 5628700 0 15261 478 16123 38989 31204 31204 1 56453 0 VTAIDFR AKQAFVQRDNARTGRVTAIDFRDIMVTIRP RDNARTGRVTAIDFRDIMVTIRPHVLTPFV R V T F R D 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 7 0 820.4443 Q9UJS0 Q9UJS0 178 184 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.03068 104.21 By MS/MS By matching 5 0 2 1 1 11941000 11897000 44443 15262 2748 16124 38990;38991 31205 31205 1 119320 37323 VTAIHIDPATHR SILGSAKHGLYLPTRVTAIHIDPATHRQKL PTRVTAIHIDPATHRQKLYTLQDKAQVADV R V T H R Q 2 1 0 1 0 0 0 0 2 2 0 0 0 0 1 0 2 0 0 1 0 0 12 0 1329.7153 P49327 P49327 1052 1063 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00024879 147.3 By MS/MS 2.5 0.957 1 2 2 1 6 23734000 23734000 0 15263 946 16125 38992;38993;38994;38995;38996;38997 31206;31207;31208;31209 31206 4 4739300 0 VTALQEECR SAEQHQRTLSAYQQRVTALQEECRAAKAEQ SAYQQRVTALQEECRAAKAEQATVTSEFES R V T C R A 1 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1104.5234 Q8IWJ2 Q8IWJ2 1299 1307 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 2 0.0018717 122.94 By MS/MS 1.5 0.5 1 1 2 248820 248820 0 15264 1868 16126 38998;38999 31210 31210 1 76521 0 VTAQGPGLEPSGNIANK PFEVYVDKSQGDASKVTAQGPGLEPSGNIA AQGPGLEPSGNIANKTTYFEIFTAGAGTGE K V T N K T 2 0 2 0 0 1 1 3 0 1 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1651.8529 P21333 P21333 384 400 FLNA Filamin-A yes yes 2 5.1989E-24 271.04 By MS/MS By matching 3.29 1.67 1 2 1 1 1 1 6 1 7620500 7565800 54736 15265 677 16127 39000;39001;39002;39003;39004;39005;39006 31211;31212;31213;31214;31215 31212 5 1413900 77407 VTASPQSLCALR FSPGQSFPASQAHLRVTASPQSLCALRAVD HLRVTASPQSLCALRAVDQSVLLMRPEAEL R V T L R A 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 2 1 0 0 1 0 0 12 0 1301.6762 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 587 598 yes yes 2 0.0031718 108.9 By MS/MS 1.5 0.5 1 1 2 332440 332440 0 + 15266 32 16128 39007;39008 31216;31217 31216 1 92577 0 VTATDLDEPDTLHTR FTVPENCRSGTSVGKVTATDLDEPDTLHTR VTATDLDEPDTLHTRLKYKILQQIPDHPKH K V T T R L 1 1 0 3 0 0 1 0 1 0 2 0 0 0 1 0 4 0 0 1 0 0 15 0 1682.8111 Q08554 Q08554 264 278 DSC1 Desmocollin-1 yes yes 2;3 8.0483E-31 281.17 By matching By MS/MS 4.3 3.1 2 1 2 2 1 2 3 7 8119900 1472000 6647900 15267 1311 16129 39009;39010;39011;39012;39013;39014;39015;39016;39017;39018 31218;31219;31220;31221;31222 31219 5 104570 1603300 VTAVIPCFPYAR LLIMINACKIASASRVTAVIPCFPYARQDK ASRVTAVIPCFPYARQDKKDKSRAPISAKL R V T A R Q 2 1 0 0 1 0 0 0 0 1 0 0 0 1 2 0 1 0 1 2 0 0 12 0 1392.7224 P60891;P21108;P11908 P60891 85 96 PRPS1;PRPS1L1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 3;Ribose-phosphate pyrophosphokinase 2 yes no 2 0.0091028 91.584 By MS/MS 7.5 0.5 1 1 2 1589000 1589000 0 15268 585 16130 39019;39020 31223;31224 31224 2 20979 0 VTAVPTLLK PYWKDPNNDFRKNLKVTAVPTLLKYGTPQK FRKNLKVTAVPTLLKYGTPQKLVESECLQA K V T L K Y 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 0 2 0 0 2 0 0 9 0 940.59572 Q9BRA2 Q9BRA2 90 98 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 2 0.0082245 103.56 By MS/MS 10 0 1 1 364470 364470 0 15269 2294 16131 39021 31225 31225 1 19643 0 VTCIDPNPNFEK CGTGANFKFYPPGCRVTCIDPNPNFEKFLI GCRVTCIDPNPNFEKFLIKSIAENRHLQFE R V T E K F 0 0 2 1 1 0 1 0 0 1 0 1 0 1 2 0 1 0 0 1 0 0 12 0 1432.6657 Q9H8H3 Q9H8H3 94 105 METTL7A Methyltransferase-like protein 7A yes yes 2 0.0026636 110.39 By MS/MS 9 0 1 1 535790 535790 0 15270 2476 16132 39022 31226 31226 1 10544 0 VTCLESGLR TQAATQVVLNVPETRVTCLESGLRVASEDS NVPETRVTCLESGLRVASEDSGLSTCTVGL R V T L R V 0 1 0 0 1 0 1 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 1033.5226 O75439 O75439 60 68 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.0022692 117.89 By MS/MS 7 0 1 1 2347400 2347400 0 15271 329 16133 39023 31227 31227 1 36850 0 VTDALNATR VGGTSDVEVNEKKDRVTDALNATRAAVEEG NEKKDRVTDALNATRAAVEEGIVLGGGCAL R V T T R A 2 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 959.50361 P10809 P10809 421 429 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 2.4355E-05 182.39 By MS/MS By MS/MS 6.11 2.69 1 1 1 2 1 1 1 1 8 1 133040000 131540000 1500400 15272 569 16134 39024;39025;39026;39027;39028;39029;39030;39031;39032 31228;31229;31230;31231;31232;31233;31234;31235 31228 8 1027400 1537500 VTDDLVCLVYK VVLKYRHSDGNLCVKVTDDLVCLVYKTDQA LCVKVTDDLVCLVYKTDQAQDVKKIEKFHS K V T Y K T 0 0 0 2 1 0 0 0 0 0 2 1 0 0 0 0 1 0 1 3 0 0 11 0 1323.6744 P49458 P49458 42 52 SRP9 Signal recognition particle 9 kDa protein yes yes 2 6.2234E-07 195.57 By MS/MS 10 0 1 1 536370 536370 0 15273 950 16135 39033 31236 31236 1 28908 0 VTDKLTPIHDR GADSRTTTGSYIANRVTDKLTPIHDRIFCC IANRVTDKLTPIHDRIFCCRSGSAADTQAV R V T D R I 0 1 0 2 0 0 0 0 1 1 1 1 0 0 1 0 2 0 0 1 0 0 11 1 1293.7041 P28072 P28072 64 74 PSMB6 Proteasome subunit beta type-6 yes yes 2;3 5.9694E-05 156.58 By MS/MS 9.5 0.5 2 2 4 4755400 4755400 0 15274 750 16136 39034;39035;39036;39037 31237;31238;31239 31238 3 99967 0 VTDLLGGLFSK SDNAFIRASRALTDKVTDLLGGLFSKTEMS LTDKVTDLLGGLFSKTEMSEVLTEILRVDP K V T S K T 0 0 0 1 0 0 0 2 0 0 3 1 0 1 0 1 1 0 0 1 0 0 11 0 1148.6441 O43615 O43615 283 293 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0044946 115.7 By MS/MS 7.5 0.5 1 1 2 255610 255610 0 15275 221 16137 39038;39039 31240 31240 1 3938 0 VTDYIAEK HIEQQIQTYQRSWLKVTDYIAEKNLPVFQP YQRSWLKVTDYIAEKNLPVFQPGVKLRDKE K V T E K N 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 8 0 937.47566 Q9UPT5 Q9UPT5 626 633 EXOC7 Exocyst complex component 7 yes yes 2 0.017415 102.51 By MS/MS 5 0 1 1 1316000 1316000 0 15276 2801 16138 39040 31241 31241 1 13199 0 VTEAPCYPGAPSTEASGQTGPQEPTSARA RRPEGPGAQAPSSPRVTEAPCYPGAPSTEA ASGQTGPQEPTSARA_______________ R V T R A - 5 1 0 0 1 2 3 3 0 0 0 0 0 0 5 3 4 0 1 1 0 0 29 1 2916.3196 P40222 P40222 518 546 TXLNA Alpha-taxilin yes yes 3 7.1541E-06 90.601 By MS/MS 5 0 1 1 2494900 2494900 0 15277 857 16139 39041 31242;31243 31243 2 25023 0 VTEDALIR PGTCTFDHRHLYTKKVTEDALIRTVSYNIL RHLYTKKVTEDALIRTVSYNILADTYAQTE K V T I R T 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 915.50255 Q6L8Q7 Q6L8Q7 289 296 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.00038996 149.4 By MS/MS 4.5 0.5 1 1 2 2981500 2981500 0 15278 1686 16140 39042;39043 31244 31244 1 54669 0 VTEEGTELSQR SGSDMPRNDINMWSKVTEEGTELSQRLVRS MWSKVTEEGTELSQRLVRSGFAGTEIDPEN K V T Q R L 0 1 0 0 0 1 3 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 11 0 1247.5994 Q99996 Q99996 1814 1824 AKAP9 A-kinase anchor protein 9 yes yes 2 1.4124E-06 185.61 By MS/MS 1 0 1 1 120260 120260 0 15279 2276 16141 39044 31245 31245 1 28979 0 VTEELLTDNR LNFKMGNRHKFTGKKVTEELLTDNRYLLLV FTGKKVTEELLTDNRYLLLVLMDAERAWSY K V T N R Y 0 1 1 1 0 0 2 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 10 0 1188.5986 Q9UHB9 Q9UHB9 113 122 SRP68 Signal recognition particle subunit SRP68 yes yes 2 2.1211E-05 167.12 By MS/MS 5 0 1 1 2832900 2832900 0 15280 2728 16142 39045 31246 31246 1 28413 0 VTEFLQQK QHLFMILASPRYVDRVTEFLQQKLKQSQLL SPRYVDRVTEFLQQKLKQSQLLALKKELMV R V T Q K L 0 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 0 991.53385 Q96JB5 Q96JB5 433 440 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 8.9402E-05 176.41 By MS/MS 5 0 1 1 1070900 1070900 0 15281 2177 16143 39046 31247 31247 1 10741 0 VTEGGEPYR HVYGIPEHADNLRLKVTEGGEPYRLYNLDV DNLRLKVTEGGEPYRLYNLDVFQYELYNPM K V T Y R L 0 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 0 1 1 0 0 9 0 1006.472 Q14697 Q14697 270 278 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0038941 111.17 By MS/MS 4 0 1 1 1265100 1265100 0 15282 1454 16144 39047 31248 31248 1 119060 0 VTEGQQER ELNKRGRVLVNDAQKVTEGQQERLERQHWT LVNDAQKVTEGQQERLERQHWTMTKIQKHQ K V T E R L 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 8 0 945.45157 Q13263 Q13263 320 327 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.020956 98.582 By MS/MS 5.5 1.5 1 1 2 1244700 1244700 0 15283 1367 16145 39048;39049 31249;31250 31250 2 33155 0 VTELALTASDR REMKPVIFLDVFLPRVTELALTASDRQTKV FLPRVTELALTASDRQTKVAACELLHSMVM R V T D R Q 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 2 0 0 1 0 0 11 0 1174.6194 P78527 P78527 914 924 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.5313E-13 242.59 By MS/MS By MS/MS 2.6 1.62 2 1 1 1 4 1 15303000 15303000 0 15284 1225 16146 39050;39051;39052;39053;39054 31251;31252;31253;31254 31252 4 3697300 0 VTFKDEPGEGSGVAR GRRCATTPMAVHRVKVTFKDEPGEGSGVAR VTFKDEPGEGSGVARSFYTAIAQAFLSNEK K V T A R S 1 1 0 1 0 0 2 3 0 0 0 1 0 1 1 1 1 0 0 2 0 0 15 1 1547.758 O95071 O95071 2279 2293 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.017878 134.4 By MS/MS 2 0.816 1 1 1 3 1467500 1467500 0 15285 384 16147 39055;39056;39057 31255;31256 31256 2 340550 0 VTFVNFTVTR TRDPTVEFPPDLCSRVTFVNFTVTRSSLQS DLCSRVTFVNFTVTRSSLQSQCLNEVLKAE R V T T R S 0 1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 3 0 0 10 0 1182.6397 Q14204 Q14204 3696 3705 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.1914E-09 219.72 By MS/MS 2 0 1 1 323150 323150 0 15286 1433 16148 39058 31257 31257 1 109300 0 VTGAALIPPPGGTSLTSLGQAAQ PNACATFNFLCHEGRVTGAALIPPPGGTSL PPGGTSLTSLGQAAQ_______________ R V T A Q - 4 0 0 0 0 2 0 4 0 1 3 0 0 0 3 2 3 0 0 1 0 0 23 0 2106.1321 Q9BU61 Q9BU61 162 184 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 0.006575 75.764 By MS/MS 10 0 1 1 237830 237830 0 15287 2321 16149 39059 31258 31258 1 12818 0 VTGADVPMPYAK MEGPAFNFLDAPAVRVTGADVPMPYAKILE AVRVTGADVPMPYAKILEDNSIPQVKDIIF R V T A K I 2 0 0 1 0 0 0 1 0 0 0 1 1 0 2 0 1 0 1 2 0 0 12 0 1247.622 P11177 P11177 325 336 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 9.633E-05 157.24 By MS/MS By MS/MS 7.38 0.484 5 3 6 2 9442800 9334500 108300 15288 575 16150;16151 39060;39061;39062;39063;39064;39065;39066;39067 31259;31260;31261;31262;31263;31264 31263 268 6 139780 195040 VTGELAFDTSSADVR WEMMPPTILIDLLKKVTGELAFDTSSADVR VTGELAFDTSSADVRCSVFKCLPMILDNKL K V T V R C 2 1 0 2 0 0 1 1 0 0 1 0 0 1 0 2 2 0 0 2 0 0 15 0 1566.7526 Q86XI2 Q86XI2 423 437 NCAPG2 Condensin-2 complex subunit G2 yes yes 2 4.7268E-07 239.48 By MS/MS 3.5 0.5 1 1 2 680310 680310 0 15289 1842 16152 39068;39069 31265 31265 1 42396 0 VTGQNQEQFLLLAK ______________________________ KVTGQNQEQFLLLAKSAKGAALATLIHQVL K V T A K S 1 0 1 0 0 3 1 1 0 0 3 1 0 1 0 0 1 0 0 1 0 0 14 0 1587.8621 Q9UBW8 Q9UBW8 7 20 COPS7A COP9 signalosome complex subunit 7a yes yes 2 8.0029E-33 272.1 By MS/MS 8 0 1 1 1694000 1694000 0 15290 2708 16153 39070 31266 31266 1 21387 0 VTGTLETK VEFSTSGSSNTDTGKVTGTLETKYKWCEYG SNTDTGKVTGTLETKYKWCEYGLTFTEKWN K V T T K Y 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 1 0 0 8 0 847.4651 P45880 P45880 65 72 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.030906 89.752 By MS/MS 8 0 1 1 4302200 4302200 0 15291 903 16154 39071 31267 31267 1 54315 0 VTHAVVTVPAYFNDAQR LTKMKETAEAYLGKKVTHAVVTVPAYFNDA HAVVTVPAYFNDAQRQATKDAGTIAGLNVM K V T Q R Q 3 1 1 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 1 4 0 0 17 0 1886.9639 P11021 P11021 165 181 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00017945 179.46 By MS/MS 5 0 1 1 5466000 5466000 0 15292 571 16155 39072 31268 31268 1 54821 0 VTIFTVPENCR KIEDDNDNAPYFEHRVTIFTVPENCRSGTS FEHRVTIFTVPENCRSGTSVGKVTATDLDE R V T C R S 0 1 1 0 1 0 1 0 0 1 0 0 0 1 1 0 2 0 0 2 0 0 11 0 1334.6653 Q08554 Q08554 246 256 DSC1 Desmocollin-1 yes yes 2 0.020668 98.044 By matching By MS/MS 5.78 2.97 1 1 1 1 1 2 2 2 7 1108600 445020 663540 15293 1311 16156 39073;39074;39075;39076;39077;39078;39079;39080;39081 31269;31270;31271 31270 3 9286 926610 VTKDGVTVAK KGRTVIIEQSWGSPKVTKDGVTVAKSIDLK WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL K V T A K S 1 0 0 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0 0 3 0 0 10 1 1016.5866 P10809 P10809 73 82 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.1791E-05 158.47 By MS/MS By matching 6.25 1.01 3 5 2 2 11 1 38661000 38633000 28276 15294 569 16157 39082;39083;39084;39085;39086;39087;39088;39089;39090;39091;39092;39093 31272;31273;31274;31275;31276 31274 5 275170 28975 VTLAQTAVPVLCGSALK FDLLPAEKLQTAIHRVTLAQTAVPVLCGSA LAQTAVPVLCGSALKNKGIQPLLDAVTMYL R V T L K N 3 0 0 0 1 1 0 1 0 0 3 1 0 0 1 1 2 0 0 3 0 0 17 0 1726.9651 Q969S9 Q969S9 318 334 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 4.2805E-07 215.09 By MS/MS 4.5 0.5 1 1 2 1541800 1541800 0 15295 2095 16158 39094;39095 31277;31278 31278 2 88670 0 VTLATLK IVEAEAMNYEGSPIKVTLATLKMSVQPTVS NYEGSPIKVTLATLKMSVQPTVSLGGFEIT K V T L K M 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 7 0 744.47454 P06748 P06748 74 80 NPM1 Nucleophosmin yes yes 2 0.038374 98.418 By MS/MS 7 0 1 1 1357400 1357400 0 15296 503 16159 39096 31279 31279 1 21309 0 VTLEYRPVIDK WRKHTLSYVDVGTGKVTLEYRPVIDKTLNE GTGKVTLEYRPVIDKTLNEADCATVPPAIR K V T D K T 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 1 0 1 2 0 0 11 1 1331.7449 P31040 P31040 637 647 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.00042548 153.1 By MS/MS 5 0 1 1 3659100 3659100 0 15297 783 16160 39097 31280 31280 1 36698 0 VTLGTQPTVLR FGLNIETGLLSDRKKVTLGTQPTVLRTFRS DRKKVTLGTQPTVLRTFRSLSTTNVFACSD K V T L R T 0 1 0 0 0 1 0 1 0 0 2 0 0 0 1 0 3 0 0 2 0 0 11 0 1183.6925 Q16531 Q16531 629 639 DDB1 DNA damage-binding protein 1 yes yes 2 0.0013605 114.4 By MS/MS 2.5 1.12 1 1 1 1 4 1691400 1691400 0 15298 1549 16161 39098;39099;39100;39101 31281;31282 31281 2 247770 0 VTLLDLMIAK ELVQAMFPKLNNQERVTLLDLMIAKITSDE NNQERVTLLDLMIAKITSDEPLTKDDIPVF R V T A K I 1 0 0 1 0 0 0 0 0 1 3 1 1 0 0 0 1 0 0 1 0 0 10 0 1115.6624 Q9UBB4 Q9UBB4 244 253 ATXN10 Ataxin-10 yes yes 2 0.00084506 126.07 By MS/MS 6.67 0.471 1 2 3 516910 516910 0 15299 2693 16162;16163 39102;39103;39104 31283;31284;31285 31285 1143 3 7202.7 0 VTLLEGDHVR IPKELPFGDKDTKSKVTLLEGDHVRFNIST DTKSKVTLLEGDHVRFNISTDRRDKLERAT K V T V R F 0 1 0 1 0 0 1 1 1 0 2 0 0 0 0 0 1 0 0 2 0 0 10 0 1137.6142 O75534 O75534 308 317 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 0.00016765 125.57 By MS/MS 4.8 0.748 2 2 1 5 9387600 9387600 0 15300 333 16164 39105;39106;39107;39108;39109 31286;31287 31286 2 635420 0 VTLMQLPTR IIAFWVPEDKDIPARVTLMQLPTRQEIRVR KDIPARVTLMQLPTRQEIRVRNLFNVVDCK R V T T R Q 0 1 0 0 0 1 0 0 0 0 2 0 1 0 1 0 2 0 0 1 0 0 9 0 1057.5954 P55884 P55884 493 501 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 5.8492E-05 166.07 By MS/MS 3 1.22 1 2 2 2 1 8 23384000 23384000 0 15301 1065 16165;16166 39110;39111;39112;39113;39114;39115;39116;39117 31288;31289;31290;31291;31292;31293;31294 31294 597 7 2151300 0 VTLSTDKNK KSLEKYIIEELNVRKVTLSTDKNKYGIRLR ELNVRKVTLSTDKNKYGIRLRAEPDHMVLG K V T N K Y 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 9 1 1004.5502 P41252 P41252 879 887 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3 0.0030616 133.86 By MS/MS 3 0 2 2 1630300 1630300 0 15302 871 16167 39118;39119 31295;31296 31295 2 29830 0 VTLTSEEEAR VPCILGQNGISDLVKVTLTSEEEARLKKSA SDLVKVTLTSEEEARLKKSADTLWGIQKEL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 1.6661E-10 214.96 By MS/MS By matching 8.4 1.02 1 2 1 1 4 1 50414000 50357000 57543 15303 440 16168 39120;39121;39122;39123;39124 31297;31298;31299 31297 3 850750 77651 VTMQNLNDR GGFGGDGGLLSGNEKVTMQNLNDRLASYLD LSGNEKVTMQNLNDRLASYLDKVRALEESN K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1089.5237 CON__P13645;P13645;CON__P02535-1;CON__Q7Z3Y7;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y8;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9;CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q7Z3Z0;Q7Z3Z0 CON__P13645 148 156 KRT10;KRT28;KRT27;KRT26;KRT14;KRT16;KRT25 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 25 no no 2 2.6452E-07 196.79 By MS/MS By MS/MS 5.69 2.78 3 4 4 2 4 7 3 4 4 4 15 24 184940000 54357000 130580000 + 15304 50;39;47;71 16169;16170 39125;39126;39127;39128;39129;39130;39131;39132;39133;39134;39135;39136;39137;39138;39139;39140;39141;39142;39143;39144;39145;39146;39147;39148;39149;39150;39151;39152;39153;39154;39155;39156;39157;39158;39159;39160;39161;39162;39163 31300;31301;31302;31303;31304;31305;31306;31307;31308;31309;31310;31311;31312;31313;31314;31315;31316;31317;31318;31319;31320;31321;31322;31323;31324;31325;31326;31327;31328;31329;31330;31331;31332;31333;31334 31320 25 35 3993700 70329000 VTNEFVHINNLK WAISPRGAGWLFGAKVTNEFVHINNLKLIC GAKVTNEFVHINNLKLICRAHQLVHEGYKF K V T L K L 0 0 3 0 0 0 1 0 1 1 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1426.7569 O00743 O00743 220 231 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.00039308 137.89 By MS/MS 8 0 1 1 1336900 1336900 0 15305 117 16171 39164 31335 31335 1 16878 0 VTNLSEDTR SMQPNRRADDNATIRVTNLSEDTRETDLQE DNATIRVTNLSEDTRETDLQELFRPFGSIS R V T T R E 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 9 0 1033.504 O75821 O75821 243 251 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 1.3164E-10 214.96 By MS/MS By MS/MS 8 1.22 1 2 2 2 1 4 4 47800000 47017000 782980 15306 348 16172 39165;39166;39167;39168;39169;39170;39171;39172 31336;31337;31338;31339;31340 31339 5 769450 1357000 VTNPNAR NRKAIVERAAQLAIRVTNPNARLRSEENE_ RAAQLAIRVTNPNARLRSEENE________ R V T A R L 1 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 7 0 770.4035 P62910 P62910 122 128 RPL32 60S ribosomal protein L32 yes yes 2 0.035286 100.74 By MS/MS 8 1.41 1 1 1 1 1 5 6792400 6792400 0 15307 1185 16173 39173;39174;39175;39176;39177 31341 31341 1 105520 0 VTNYIFDSLR IKKDPYTATMIGFSKVTNYIFDSLRGSDPS IGFSKVTNYIFDSLRGSDPSTHQRPPSEMA K V T L R G 0 1 1 1 0 0 0 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 10 0 1226.6295 Q8TC07 Q8TC07 253 262 TBC1D15 TBC1 domain family member 15 yes yes 2 0.00015719 150.04 By MS/MS 5 0 1 1 1235500 1235500 0 15308 1987 16174 39178 31342 31342 1 12391 0 VTPPEGYEVVTVFPK FVEDQIYCEKHARERVTPPEGYEVVTVFPK VTPPEGYEVVTVFPK_______________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.027384 78.903 By MS/MS 7 0 1 1 2268900 2268900 0 15309 84 16175 39179 31343 31343 1 35618 0 VTPTRTEIIILATR TRELAEDGYSGVEVRVTPTRTEIIILATRT RVTPTRTEIIILATRTQNVLGEKGRRIREL R V T T R T 1 2 0 0 0 0 1 0 0 3 1 0 0 0 1 0 4 0 0 1 0 0 14 1 1582.9406 P23396 P23396 41 54 RPS3 40S ribosomal protein S3 yes yes 2;3 0.003505 130.44 By MS/MS 8.44 1.07 2 3 2 2 9 56650000 56650000 0 15310 703 16176 39180;39181;39182;39183;39184;39185;39186;39187;39188 31344;31345;31346;31347;31348;31349;31350;31351 31351 8 786480 0 VTQDSLAQATQLAEER IIAVIYGRYLRKLTKVTQDSLAQATQLAEE TQDSLAQATQLAEERIGNVRTVRAFGKEMT K V T E R I 3 1 0 1 0 3 2 0 0 0 2 0 0 0 0 1 2 0 0 1 0 0 16 0 1758.8748 Q9NRK6 Q9NRK6 342 357 ABCB10 ATP-binding cassette sub-family B member 10, mitochondrial yes yes 2 0.008623 91.845 By MS/MS 1 0 1 1 75185 75185 0 15311 2553 16177 39189 31352 31352 0 18117 0 VTQLTDR QYPLYDLDLGKFGEKVTQLTDRWQRIDKQI DLGKFGEKVTQLTDRWQRIDKQIDFRLWDL K V T D R W 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 7 0 831.44503 P15924 P15924 860 866 DSP Desmoplakin yes yes 2 0.026311 136.75 By MS/MS 3 0 1 1 570830 0 570830 15312 628 16178 39190 31353 31353 1 0 72658 VTQLYVPASR PNHWLSEQEDIKADKVTQLYVPASRHVWRF IKADKVTQLYVPASRHVWRFRRMGRIGPLQ K V T S R H 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 2 0 0 10 0 1132.6241 Q15386 Q15386 639 648 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.021767 85.963 By MS/MS 4 0 1 1 510360 510360 0 15313 1505 16179 39191 31354 31354 1 48028 0 VTQQGLK ELQLCKGLVQALQTKVTQQGLKMVVPGLDG LVQALQTKVTQQGLKMVVPGLDGAQIPRDP K V T L K M 0 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 7 0 772.4443 P49327 P49327 1152 1158 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.014163 124.59 By MS/MS By matching 2.33 0.471 2 1 2 1 8625200 8585200 40007 15314 946 16180 39192;39193;39194 31355;31356 31356 2 1681400 56578 VTQSNFAVGYK WLAGYQMNFETAKSRVTQSNFAVGYKTDEF AKSRVTQSNFAVGYKTDEFQLHTNVNDGTE R V T Y K T 1 0 1 0 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 11 0 1212.6139 P21796 P21796 164 174 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 2.105E-09 228.84 By MS/MS 8 0 1 1 2263000 2263000 0 15315 681 16181 39195 31357 31357 1 28570 0 VTQSYAR KELWSSCTTPDEWWRVTQSYARSTAVMSMV TTPDEWWRVTQSYARSTAVMSMVGYIIGLG R V T A R S 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 7 0 823.41882 Q96Q15 Q96Q15 2313 2319 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.032587 102.77 By MS/MS 1.5 0.5 1 1 2 148210 148210 0 15316 2213 16182 39196;39197 31358 31358 1 40991 0 VTQVDGHSSK TAEEKAIVQQWLEYRVTQVDGHSSKNDIHT WLEYRVTQVDGHSSKNDIHTLLKDLNSYLE R V T S K N 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 2 1 0 0 2 0 0 10 0 1056.52 O43324 O43324 79 88 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 7.6739E-08 194.94 By MS/MS 9.5 0.5 1 1 2 2450400 2450400 0 15317 204 16183 39198;39199 31359;31360 31359 2 56643 0 VTQVDGHSSKNDIHTLLK TAEEKAIVQQWLEYRVTQVDGHSSKNDIHT VDGHSSKNDIHTLLKDLNSYLEDKVYLTGY R V T L K D 0 0 1 2 0 1 0 1 2 1 2 2 0 0 0 2 2 0 0 2 0 0 18 1 1991.0436 O43324 O43324 79 96 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 3 0.027218 65.949 By MS/MS 9 0 1 1 460370 460370 0 15318 204 16184 39200 31361 31361 1 9060.2 0 VTQVDGNSPVR SFVSKKNYCNIQVTKVTQVDGNSPVRFSTE QVTKVTQVDGNSPVRFSTETTFLVDKYEIL K V T V R F 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 1 1 0 0 3 0 0 11 0 1170.5993 P48444 P48444 486 496 ARCN1 Coatomer subunit delta yes yes 2 5.1969E-13 228.84 By MS/MS By MS/MS 5 2.35 1 2 1 3 1 11372000 11309000 63036 15319 934 16185 39201;39202;39203;39204 31362;31363;31364 31364 3 106210 64594 VTSAHKGPDETLR IKKACGNFGIPCELRVTSAHKGPDETLRIK LRVTSAHKGPDETLRIKAEYEGDGIPTVFV R V T L R I 1 1 0 1 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 1 0 0 13 1 1409.7263 P22234 P22234 299 311 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2;4 0.013568 110.31 By MS/MS 7 0 2 2 1960400 1960400 0 15320 689 16186 39205;39206 31365;31366 31366 2 30775 0 VTSAVEALLSADSASR ARDGLGGLPDIVRDRVTSAVEALLSADSAS TSAVEALLSADSASRKQEVQAWDGEVRQVS R V T S R K 4 1 0 1 0 0 1 0 0 0 2 0 0 0 0 4 1 0 0 2 0 0 16 0 1575.8104 P45974 P45974 147 162 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.00025993 174.72 By MS/MS 3.5 0.5 1 1 2 552230 552230 0 15321 906 16187 39207;39208 31367 31367 1 47859 0 VTSGGVSESPSGFSK RWYNKPLKKGAKRPRVTSGGVSESPSGFSK VTSGGVSESPSGFSKHIQSNLDFSPVNSAS R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 O14757 O14757 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 2 9.8769E-05 182.23 By MS/MS 6 0 1 1 490910 490910 0 15322 138 16188 39209 31368 31368 1 3374.7 0 VTSLILIR MKRVGVVFTPADYGKVTSLILIRNNLTVID TPADYGKVTSLILIRNNLTVIDMIGVEGFG K V T I R N 0 1 0 0 0 0 0 0 0 2 2 0 0 0 0 1 1 0 0 1 0 0 8 0 913.59605 A2VDJ0 A2VDJ0 700 707 KIAA0922 Transmembrane protein 131-like yes yes 2 0.0033553 133.12 By MS/MS 2 0 1 1 179750 179750 0 15323 13 16189 39210 31369 31369 1 60799 0 VTSLPDNHK EELVAKEVLHALKEKVTSLPDNHKNALAAN HALKEKVTSLPDNHKNALAANIDEIVFTST K V T H K N 0 0 1 1 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 1 0 0 9 0 1009.5193 Q8WWC4 Q8WWC4 183 191 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00066887 141.52 By MS/MS 9 0 1 1 985630 985630 0 15324 2034 16190 39211 31370 31370 1 19397 0 VTSSEPPNPASSSK NFLFSNPPPTQTSVRVTSSEPPNPASSSKS RVTSSEPPNPASSSKSEKREPVRKRVLEKR R V T S K S 1 0 1 0 0 0 1 0 0 0 0 1 0 0 3 5 1 0 0 1 0 0 14 0 1386.6627 Q92575 Q92575 446 459 UBXN4 UBX domain-containing protein 4 yes yes 2 0.0081197 96.334 By MS/MS 6 0.816 1 1 1 3 3662000 3662000 0 15325 2058 16191 39212;39213;39214 31371;31372 31371 2 34224 0 VTTADPYASGK KVLHIPEFYVGSILRVTTADPYASGKISQF SILRVTTADPYASGKISQFLGICIQRSGRG R V T G K I 2 0 0 1 0 0 0 1 0 0 0 1 0 0 1 1 2 0 1 1 0 0 11 0 1108.5401 P49406 P49406 119 129 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.0093064 92.538 By MS/MS 8 0 1 1 3803900 3803900 0 15326 948 16192 39215 31373 31373 1 48023 0 VTTEQYQK EQLARLEERSSEFYRVTTEQYQKAAEEVEA RSSEFYRVTTEQYQKAAEEVEAKFKRYESH R V T Q K A 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 2 0 1 1 0 0 8 0 995.49238 Q9NX63 Q9NX63 158 165 CHCHD3 MICOS complex subunit MIC19 yes yes 2 0.018237 101.6 By MS/MS 8 0 1 1 1993300 1993300 0 15327 2621 16193 39216 31374 31374 1 25165 0 VTTPQEGYISR KMCFETLLQFSFSNKVTTPQEGYISRMALS FSNKVTTPQEGYISRMALSVLLKRSQDVLH K V T S R M 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 1 2 0 1 1 0 0 11 0 1249.6303 Q7Z3U7 Q7Z3U7 1595 1605 MON2 Protein MON2 homolog yes yes 2 0.04555 72.289 By MS/MS 2 0 1 1 613820 613820 0 15328 1787 16194 39217 31375 31375 1 207620 0 VTTQTSLPLFR PEKIGDGMNAYVAYKVTTQTSLPLFRSKQF VAYKVTTQTSLPLFRSKQFAVKRRFSDFLG K V T F R S 0 1 0 0 0 1 0 0 0 0 2 0 0 1 1 1 3 0 0 1 0 0 11 0 1261.703 Q13596 Q13596 167 177 SNX1 Sorting nexin-1 yes yes 2 0.039116 75.652 By MS/MS 5 0 1 1 514980 514980 0 15329 1401 16195 39218 31376 31376 1 5165 0 VTVCQALR ARTLGMAISERPDLRVTVCQALRTLITKGC SERPDLRVTVCQALRTLITKGCQAEADRAE R V T L R T 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 945.50659 Q5JTH9 Q5JTH9 659 666 RRP12 RRP12-like protein yes yes 2 0.021068 98.458 By MS/MS 3 0 1 1 782590 782590 0 15330 1610 16196 39219 31377 31377 1 14319 0 VTVDTGVIPASEEK KESQRKFEEETVKSKVTVDTGVIPASEEKA KVTVDTGVIPASEEKAETPTAAEDDNEGDK K V T E K A 1 0 0 1 0 0 2 1 0 1 0 1 0 0 1 1 2 0 0 3 0 0 14 0 1443.7457 O60841 O60841 285 298 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 4.8355E-05 188.27 By MS/MS 2.5 0.5 1 1 2 2421900 2421900 0 15331 283 16197 39220;39221 31378;31379 31379 2 339940 0 VTVGVDGTLYK VVDRIRENRGLDALKVTVGVDGTLYKLHPH DALKVTVGVDGTLYKLHPHFAKVMHETVKD K V T Y K L 0 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 2 0 1 3 0 0 11 0 1150.6234 P52789 P52789 856 866 HK2 Hexokinase-2 yes yes 2 0.029387 81.525 By MS/MS 4 0 1 1 694510 694510 0 15332 1023 16198 39222 31380 31380 1 65358 0 VTVLFAGQHIAK TFSVWYVPEVTGTHKVTVLFAGQHIAKSPF THKVTVLFAGQHIAKSPFEVYVDKSQGDAS K V T A K S 2 0 0 0 0 1 0 1 1 1 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1282.7398 P21333 P21333 356 367 FLNA Filamin-A yes yes 2 0.0029952 109.42 By MS/MS 1.5 0.5 1 1 2 523460 523460 0 15333 677 16199 39223;39224 31381 31381 1 166790 0 VTVMASLR PLPEYHVRIAGFDERVTVMASLRRPKRIII IAGFDERVTVMASLRRPKRIIIRGHDEREH R V T L R R 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 2 0 0 8 0 875.48987 P78527 P78527 3726 3733 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.012059 108.46 By MS/MS 1.5 0.5 1 1 2 401930 401930 0 15334 1225 16200 39225;39226 31382;31383 31383 2 119170 0 VTVNPGLLVPLDVK SRSLTGCWSAGTISKVTVNPGLLVPLDVKL KVTVNPGLLVPLDVKLDPAVQQLKNQEKEE K V T V K L 0 0 1 1 0 0 0 1 0 0 3 1 0 0 2 0 1 0 0 4 0 0 14 0 1462.8759 CON__Q6KB66-1;Q6KB66 CON__Q6KB66-1 58 71 KRT80 Keratin, type II cytoskeletal 80 yes no 2 0.002112 126.83 By matching By MS/MS 3.5 0.5 1 1 1 1 112430 50543 61886 + 15335 69 16201 39227;39228 31384 31384 1 4756.4 7877.2 VTYCPTEPGNYIINIK KVDINTEDLEDGTCRVTYCPTEPGNYIINI TYCPTEPGNYIINIKFADQHVPGSPFSVKV R V T I K F 0 0 2 0 1 0 1 1 0 3 0 1 0 0 2 0 2 0 2 1 0 0 16 0 1880.9342 P21333 P21333 2104 2119 FLNA Filamin-A yes yes 2 0.00012875 181.31 By MS/MS 2 0 1 1 120020 120020 0 15336 677 16202 39229 31385 31385 1 40597 0 VTYDSDATSSACR IFHAISPIPHFIAKRVTYDSDATSSACREL KRVTYDSDATSSACRELAYFFTTGIVVSAF R V T C R E 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 3 2 0 1 1 0 0 13 0 1431.5936 O15243 O15243 55 67 LEPROT Leptin receptor gene-related protein yes yes 2 0.00044851 136.96 By MS/MS 2 0.816 1 1 1 3 554110 554110 0 15337 174 16203 39230;39231;39232 31386 31386 1 125150 0 VVACNLYPFVK EDNADMARLDFNLIRVVACNLYPFVKTVAS NLIRVVACNLYPFVKTVASPGVTVEEAVEQ R V V V K T 1 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 0 0 1 3 0 0 11 0 1308.69 P31939 P31939 98 108 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.0080941 95.741 By MS/MS 5.5 0.5 1 1 2 1058900 1058900 0 15338 789 16204 39233;39234 31387 31387 1 8224.1 0 VVAEPVELAQEFR LSGYVELRYDDEVKRVVAEPVELAQEFRKF KRVVAEPVELAQEFRKFDLNSPWEAFPVYR R V V F R K 2 1 0 0 0 1 3 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 13 0 1485.7827 O75489 O75489 219 231 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2;3 0.00038468 132.56 By MS/MS 8.4 1.02 1 2 1 1 5 18782000 18782000 0 15339 330 16205 39235;39236;39237;39238;39239 31388;31389;31390;31391;31392;31393 31388 6 242960 0 VVAEPVELAQEFRK LSGYVELRYDDEVKRVVAEPVELAQEFRKF RVVAEPVELAQEFRKFDLNSPWEAFPVYRQ R V V R K F 2 1 0 0 0 1 3 0 0 0 1 1 0 1 1 0 0 0 0 3 0 0 14 1 1613.8777 O75489 O75489 219 232 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.0021022 132.14 By MS/MS 8 0 1 1 1341100 1341100 0 15340 330 16206 39240 31394 31394 1 16931 0 VVAEYLNGAVR GVVIYVNSRPCCVPRVVAEYLNGAVREESI CVPRVVAEYLNGAVREESIHCKSVEEISTL R V V V R E 2 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 3 0 0 11 0 1189.6455 Q8N983 Q8N983 75 85 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 7.0716E-06 175.93 By MS/MS 9.5 0.5 1 1 2 1732900 1732900 0 15341 1933 16207 39241;39242 31395;31396 31395 2 57247 0 VVAIVLHPFS AGGVGITCWILVCNKVVAIVLHPFS_____ LVCNKVVAIVLHPFS_______________ K V V F S - 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 0 3 0 0 10 0 1080.6332 O00258 O00258 165 174 WRB Tail-anchored protein insertion receptor WRB yes yes 2 2.5179E-05 164.53 By MS/MS 9 0 1 1 268150 268150 0 15342 95 16208 39243 31397 31397 1 5277.3 0 VVANSKESYELR TKKYLKKNNLRDWLRVVANSKESYELRYFQ WLRVVANSKESYELRYFQINQDEEEEEDED R V V L R Y 1 1 1 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 1 2 0 0 12 1 1393.7201 P35268 P35268 102 113 RPL22 60S ribosomal protein L22 yes yes 2;3 1.1241E-11 227.36 By MS/MS 9.67 0.471 1 2 3 1709100 1709100 0 15343 819 16209 39244;39245;39246 31398;31399 31399 2 89969 0 VVAPTISSPVCQEQLVEAGR TQCALSTSQLVACTKVVAPTISSPVCQEQL ISSPVCQEQLVEAGRLVAKAVEGCVSASQA K V V G R L 2 1 0 0 1 2 2 1 0 1 1 0 0 0 2 2 1 0 0 4 0 0 20 0 2139.0994 Q9Y490 Q9Y490 722 741 TLN1 Talin-1 yes yes 2 6.5363E-06 183.31 By MS/MS 3 0.816 1 1 1 3 1489900 1489900 0 15344 2888 16210 39247;39248;39249 31400 31400 1 343940 0 VVAQYAQR HSNPGDPALWSLLSRVVAQYAQRNAKGGVV LWSLLSRVVAQYAQRNAKGGVVAGNVAHIL R V V Q R N 2 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 8 0 933.50321 Q6PGP7 Q6PGP7 1202 1209 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.003804 131.04 By MS/MS 3 0 1 1 1366200 1366200 0 15345 1716 16211 39250 31401 31401 1 24997 0 VVASDKETYELR TKKYLKKNNLRDWLRVVASDKETYELRYFQ WLRVVASDKETYELRYFQISQDEDESESED R V V L R Y 1 1 0 1 0 0 2 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 12 1 1408.7198 Q6P5R6 Q6P5R6 96 107 RPL22L1 60S ribosomal protein L22-like 1 yes yes 2 1.4051E-05 194.48 By MS/MS 10 0 1 1 960880 960880 0 15346 1713 16212 39251 31402 31402 1 51788 0 VVDALGNAIDGK GAIVDVPVGEELLGRVVDALGNAIDGKGPI LGRVVDALGNAIDGKGPIGSKTRRRVGLKA R V V G K G 2 0 1 2 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1170.6245 P25705 P25705 150 161 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.3527E-05 175.74 By MS/MS By MS/MS 6.2 0.4 4 1 3 2 27326000 26646000 679880 15347 723 16213 39252;39253;39254;39255;39256 31403;31404;31405;31406;31407;31408 31407 6 193190 696690 VVDALGNAIDGKGPIGSK GAIVDVPVGEELLGRVVDALGNAIDGKGPI ALGNAIDGKGPIGSKTRRRVGLKAPGIIPR R V V S K T 2 0 1 2 0 0 0 4 0 2 1 2 0 0 1 1 0 0 0 2 0 0 18 1 1709.9312 P25705 P25705 150 167 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.0827E-06 209.22 By MS/MS By matching 7 1.05 4 2 2 1 7 2 65029000 64879000 150220 15348 723 16214 39257;39258;39259;39260;39261;39262;39263;39264;39265 31409;31410;31411;31412 31412 4 472540 153930 VVDDEIYYFR MKKFKGLKRFSLSAKVVDDEIYYFRKPIVP SLSAKVVDDEIYYFRKPIVPQKEPSPLLEK K V V F R K 0 1 0 2 0 0 1 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 10 0 1317.6241 Q86U86 Q86U86 1283 1292 PBRM1 Protein polybromo-1 yes yes 2 0.0007648 134.77 By MS/MS 2 0 1 1 260870 260870 0 15349 1817 16215 39266 31413 31413 1 88237 0 VVDLAPLHLDAR KALGYMERAAESYGKVVDLAPLHLDARISL YGKVVDLAPLHLDARISLSTLQQQLGQPEK K V V A R I 2 1 0 2 0 0 0 0 1 0 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1317.7405 Q9Y5Q9 Q9Y5Q9 482 493 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2;3 0.0032506 107.06 By MS/MS 4.33 0.471 2 1 3 1941500 1941500 0 15350 2920 16216 39267;39268;39269 31414;31415 31414 2 166320 0 VVDLLAPYAK MEMSVEQEILVTGIKVVDLLAPYAKGGKIG VTGIKVVDLLAPYAKGGKIGLFGGAGVGKT K V V A K G 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1087.6277 P06576 P06576 189 198 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.00035984 136.27 By MS/MS By MS/MS 6.6 1.02 1 1 2 1 4 1 135900000 135900000 0 15351 497 16217 39270;39271;39272;39273;39274 31416;31417;31418;31419;31420 31420 5 1116700 0 VVDLLAQDADIVCR TVVLGAQWGDEGKGKVVDLLAQDADIVCRC KVVDLLAQDADIVCRCQGGNNAGHTVVVDS K V V C R C 2 1 0 3 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 14 0 1585.8134 P30520 P30520 46 59 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 4.2812E-07 204.32 By MS/MS 7 0 1 1 2831100 2831100 0 15352 774 16218 39275 31421 31421 1 44443 0 VVDLLVIK VREMFMKNAHVTDPRVVDLLVIKGKIELEE AHVTDPRVVDLLVIKGKIELEETIKVWKQR R V V I K G 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 3 0 0 8 0 897.5899 P56556 P56556 78 85 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 2 0.021662 97.798 By MS/MS 10 0 1 1 1790400 1790400 0 15353 1074 16219 39276 31422 31422 1 96495 0 VVDNASQGEGVR SWAALASWAYRWGRKVVDNASQGEGVRLLP GRKVVDNASQGEGVRLLPREKSEVQNLLPD K V V V R L 1 1 1 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1229.6 Q96Q15 Q96Q15 1633 1644 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 2.2216E-06 196.44 By MS/MS 1.5 0.5 1 1 2 120860 120860 0 15354 2213 16220 39277;39278 31423;31424 31423 2 29124 0 VVDNSALGNSPYHR TTGSLSAIQKMTRVRVVDNSALGNSPYHRA RVVDNSALGNSPYHRAPRCIHVYKKNGVGK R V V H R A 1 1 2 1 0 0 0 1 1 0 1 0 0 0 1 2 0 0 1 2 0 0 14 0 1527.743 Q6P1L8 Q6P1L8 40 53 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 0.00043055 142.12 By MS/MS 10 0 1 1 571150 571150 0 15355 1699 16221 39279 31425;31426 31425 2 30783 0 VVDPFSKK NKRLTKGGKKGAKKKVVDPFSKKDWYDVKA KKGAKKKVVDPFSKKDWYDVKAPAMFNIRN K V V K K D 0 0 0 1 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 2 0 0 8 1 918.51747 P61247 P61247 21 28 RPS3A 40S ribosomal protein S3a yes yes 2;3 0.016331 118.74 By MS/MS 7.67 0.471 1 2 3 7967100 7967100 0 15356 1118 16222 39280;39281;39282 31427;31428 31427 2 101990 0 VVDPTPEQFQAFR YKGKWHGDVAVKILKVVDPTPEQFQAFRNE LKVVDPTPEQFQAFRNEVAVLRKTRHVNIL K V V F R N 1 1 0 1 0 2 1 0 0 0 0 0 0 2 2 0 1 0 0 2 0 0 13 0 1532.7623 P04049 P04049 379 391 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 2 0.00025886 156.58 By MS/MS 5 0 1 1 977220 977220 0 15357 465 16223 39283 31429 31429 1 9801 0 VVDQLHQELMQK V V Q K 0 0 0 1 0 3 1 0 1 0 2 1 1 0 0 0 0 0 0 2 0 0 12 0 1466.7551 REV__P40763 yes yes 2 0.0081241 93.649 By MS/MS 6 0 1 1 377780 377780 0 + 15358 2959 16224 39284 31430 31430 1220 1 2597 0 VVDRDSEEAEIIR DPIDVNYEKLKTDIKVVDRDSEEAEIIRKY IKVVDRDSEEAEIIRKYVKNTHATTHNAYD K V V I R K 1 2 0 2 0 0 3 0 0 2 0 0 0 0 0 1 0 0 0 2 0 0 13 1 1529.7686 P09874 P09874 803 815 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.00018897 152.47 By MS/MS By matching 3.6 0.49 2 3 4 1 8046900 8011100 35733 15359 543 16225 39285;39286;39287;39288;39289 31431;31432;31433 31432 3 619890 76135 VVDSLYNK KTYEAALETIQNMSKVVDSLYNKAKKLT__ TIQNMSKVVDSLYNKAKKLT__________ K V V N K A 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 8 0 936.49165 O00231 O00231 410 417 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.023363 95.909 By MS/MS 6.5 0.5 1 1 2 6252900 6252900 0 15360 93 16226 39290;39291 31434 31434 1 92628 0 VVDSMDALDK KRQRLPMPSPERLDKVVDSMDALDKVVQER ERLDKVVDSMDALDKVVQEREDALRLLQTG K V V D K V 1 0 0 3 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 2 0 0 10 0 1091.5169 Q9HD33 Q9HD33 135 144 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 0.001945 126.31 By MS/MS 9 0 2 2 249250 249250 0 15361 2518 16227;16228 39292;39293 31435;31436 31436 1107 2 4905.3 0 VVEDIEYLK EVLQYSAREAQDSKKVVEDIEYLKFDKGPW AQDSKKVVEDIEYLKFDKGPWLKQDNRTLY K V V L K F 0 0 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 1 2 0 0 9 0 1106.5859 O95299 O95299 269 277 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.0036437 113.26 By MS/MS 7.5 0.5 1 1 2 2156900 2156900 0 15362 404 16229 39294;39295 31437 31437 1 32561 0 VVEEIKK RLFVEESIHDEFVTRVVEEIKKMKIGDPLD IHDEFVTRVVEEIKKMKIGDPLDRSTDHGP R V V K K M 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 2 0 0 7 1 843.50657 Q3SY69 Q3SY69 748 754 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 2 0.031617 138.24 By MS/MS 4 0 1 1 1226200 1226200 0 15363 1578 16230 39296 31438 31438 1 115390 0 VVEEPYTVR ELRSVEGLQEGSVLRVVEEPYTVREARIHV EGSVLRVVEEPYTVREARIHVRHVRDLLKS R V V V R E 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 1 0 1 3 0 0 9 0 1090.5659 O75153 O75153 118 126 CLUH Clustered mitochondria protein homolog yes yes 2 0.020263 88.819 By MS/MS 3 0 1 1 479680 479680 0 15364 300 16231 39297 31439 31439 1 8776.8 0 VVEGTPLIDGR WFLIQVLFYLLPIGKVVEGTPLIDGRRLKY PIGKVVEGTPLIDGRRLKYRLNGFYAFILT K V V G R R 0 1 0 1 0 0 1 2 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1154.6295 Q14739 Q14739 280 290 LBR Lamin-B receptor yes yes 2 7.0944E-06 175.91 By MS/MS 2 1 1 1 2 1105500 1105500 0 15365 1456 16232 39298;39299 31440;31441 31440 2 197290 0 VVEHNIR STEEGEKRWKDLKNRVVEHNIRIMAKYYTR RWKDLKNRVVEHNIRIMAKYYTRITMKRMA R V V I R I 0 1 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 865.477 O00232 O00232 358 364 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.042447 95.352 By MS/MS 6 0 1 1 3294200 3294200 0 15366 94 16233 39300 31442 31442 1 22645 0 VVEIVDEK TTDISLIFAALKDSKVVEIVDEKVRRREEP AALKDSKVVEIVDEKVRRREEPEKWPLPPI K V V E K V 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 3 0 0 8 0 929.50696 Q6PKG0 Q6PKG0 466 473 LARP1 La-related protein 1 yes yes 2 0.0024824 138.54 By MS/MS 3.5 0.5 1 1 2 2223500 2223500 0 15367 1722 16234 39301;39302 31443 31443 1 70196 0 VVEIVDEKVR TTDISLIFAALKDSKVVEIVDEKVRRREEP LKDSKVVEIVDEKVRRREEPEKWPLPPIVD K V V V R R 0 1 0 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 4 0 0 10 1 1184.6765 Q6PKG0 Q6PKG0 466 475 LARP1 La-related protein 1 yes yes 2 0.0072964 114.4 By MS/MS 3 0.816 1 1 1 3 1643300 1643300 0 15368 1722 16235 39303;39304;39305 31444 31444 1 125150 0 VVEKEAETER ESEKTKLLIAAQKQKVVEKEAETERKKALI AQKQKVVEKEAETERKKALIEAEKVAQVAE K V V E R K 1 1 0 0 0 0 4 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 10 1 1188.5986 O94905;O75477 O94905 202 211 ERLIN2;ERLIN1 Erlin-2;Erlin-1 yes no 2 6.3747E-05 172.56 By MS/MS 7 0 1 1 1072300 1072300 0 15369 375 16236 39306 31445 31445 1 16834 0 VVEVLAGHGHLYSR CLDTAVENMPSLKMKVVEVLAGHGHLYSRI KVVEVLAGHGHLYSRIPGLLSPHPLLQLSY K V V S R I 1 1 0 0 0 0 1 2 2 0 2 0 0 0 0 1 0 0 1 3 0 0 14 0 1535.8209 P49327 P49327 1242 1255 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.0041328 92.295 By MS/MS 1.67 0.471 1 2 3 3745900 3745900 0 15370 946 16237 39307;39308;39309 31446;31447 31447 2 1260900 0 VVFLTGAR LGVAVNRTLGHRLERVVFLTGARGRRAPPG LGHRLERVVFLTGARGRRAPPGMAVVTLGE R V V A R G 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 861.50724 Q8IZ52 Q8IZ52 148 155 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.03615 87.754 By MS/MS 4 0 1 1 684580 684580 0 15371 1890 16238 39310 31448 31448 1 64424 0 VVFPSGEVVEQK DARRWVRALRRSPVKVVFPSGEVVEQKRAP PVKVVFPSGEVVEQKRAPGKQPRKAPSEAS K V V Q K R 0 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 4 0 0 12 0 1316.6976 Q9HC36 Q9HC36 40 51 RNMTL1 rRNA methyltransferase 3, mitochondrial yes yes 2 0.0010887 123.51 By MS/MS 6 0 1 1 2120500 2120500 0 15372 2511 16239 39311 31449 31449 1 14577 0 VVFSTGPQSTK AGYFDIYFEKNCHNRVVFSTGPQSTKTHWK CHNRVVFSTGPQSTKTHWKQTVFLLEKPFS R V V T K T 0 0 0 0 0 1 0 1 0 0 0 1 0 1 1 2 2 0 0 2 0 0 11 0 1149.603 O60678 O60678 467 477 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.0072241 98.04 By MS/MS 5.5 0.5 1 1 2 1738400 1738400 0 15373 269 16240 39312;39313 31450 31450 1 15547 0 VVGAMQLYSVDR QKWLLLTGISAQQNRVVGAMQLYSVDRKVS QNRVVGAMQLYSVDRKVSQPIEGHAASFAQ R V V D R K 1 1 0 1 0 1 0 1 0 0 1 0 1 0 0 1 0 0 1 3 0 0 12 0 1336.6809 Q00610;P53675 Q00610 177 188 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.00013071 155 By MS/MS 1.8 0.748 2 2 1 5 977670 977670 0 15374 1262 16241;16242 39314;39315;39316;39317;39318 31451;31452;31453;31454;31455;31456 31455 757 6 234870 0 VVGAVIDQGLITR KRRRVLNRERRLRHRVVGAVIDQGLITRHH HRVVGAVIDQGLITRHHLKKRASSARANIT R V V T R H 1 1 0 1 0 1 0 2 0 2 1 0 0 0 0 0 1 0 0 3 0 0 13 0 1339.7823 E9PRG8 E9PRG8 36 48 C11orf98 Uncharacterized protein C11orf98 yes yes 2 0.00039112 142.89 By MS/MS 9 0 1 1 244410 244410 0 15375 76 16243 39319 31457 31457 1 4810 0 VVGAYNQCPVVR DRASLTRCRLGDVVRVVGAYNQCPVVRFIC VVRVVGAYNQCPVVRFICRLDQTLSVRGED R V V V R F 1 1 1 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 4 0 0 12 0 1360.6922 Q8N2G8 Q8N2G8 370 381 GHDC GH3 domain-containing protein yes yes 2 1.9906E-08 204.62 By MS/MS 6 0 1 1 4910100 4910100 0 15376 1908 16244 39320 31458 31458 1 33753 0 VVGCSCVVVK WVGLCKIDREGKPRKVVGCSCVVVKDYGKE GKPRKVVGCSCVVVKDYGKESQAKDVIEEY K V V V K D 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 1 0 0 0 5 0 0 10 0 1105.5624 P25398 P25398 103 112 RPS12 40S ribosomal protein S12 yes yes 2 0.00050267 133.23 By MS/MS 10 0 1 1 4700400 4700400 0 15377 721 16245 39321 31459 31459 1 253340 0 VVGCSCVVVKDYGK WVGLCKIDREGKPRKVVGCSCVVVKDYGKE KVVGCSCVVVKDYGKESQAKDVIEEYFKCK K V V G K E 0 0 0 1 2 0 0 2 0 0 0 2 0 0 0 1 0 0 1 5 0 0 14 1 1568.7691 P25398 P25398 103 116 RPS12 40S ribosomal protein S12 yes yes 2 0.0020418 160.72 By MS/MS 10 0 1 1 350530 350530 0 15378 721 16246 39322 31460 31460 1 18892 0 VVGDVAYDEAK GINYVPDDKKPNGRKVVGDVAYDEAKERAS NGRKVVGDVAYDEAKERASFITPVPGGVGP K V V A K E 2 0 0 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 11 0 1164.5663 P11586 P11586 252 262 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00014717 147.75 By MS/MS 4.5 0.5 1 1 2 677050 677050 0 15379 582 16247 39323;39324 31461 31461 1 58639 0 VVGDVAYDEAKER GINYVPDDKKPNGRKVVGDVAYDEAKERAS RKVVGDVAYDEAKERASFITPVPGGVGPMT K V V E R A 2 1 0 2 0 0 2 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 13 1 1449.71 P11586 P11586 252 264 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.0035093 113.61 By MS/MS 4.33 0.471 2 1 3 8699100 8699100 0 15380 582 16248 39325;39326;39327 31462;31463;31464 31463 3 782030 0 VVGNPCPICR VPPQRTRKTCIRRNKVVGNPCPICRDHKLH IRRNKVVGNPCPICRDHKLHVDFRNVKLLE K V V C R D 0 1 1 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 2 0 0 10 0 1170.5638 Q9Y676 Q9Y676 100 109 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 1.8247E-05 169.06 By MS/MS 8.5 0.5 1 1 2 5967300 5967300 0 15381 2932 16249 39328;39329 31465;31466 31465 2 76741 0 VVGPQQLHSETNER DINDDEFLHLPAHLRVVGPQQLHSETNERL RVVGPQQLHSETNERLFDEKYKPVVLTDDQ R V V E R L 0 1 1 0 0 2 2 1 1 0 1 0 0 0 1 1 1 0 0 2 0 0 14 0 1592.7907 Q9BSF4 Q9BSF4 198 211 C19orf52 Uncharacterized protein C19orf52 yes yes 2 3.6808E-07 207.34 By MS/MS 8 0 1 1 767450 767450 0 15382 2305 16250 39330 31467;31468 31468 2 9689 0 VVGSEFVQK LAKAVAHHTTAAFIRVVGSEFVQKYLGEGP TAAFIRVVGSEFVQKYLGEGPRMVRDVFRL R V V Q K Y 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 3 0 0 9 0 991.53385 P43686 P43686 230 238 PSMC4 26S protease regulatory subunit 6B yes yes 2 1.3339E-07 200.16 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 12335000 12296000 39742 15383 900 16251 39331;39332;39333;39334;39335 31469 31469 1 101860 40724 VVGSELIQK LAKAVANQTSATFLRVVGSELIQKYLGDGP SATFLRVVGSELIQKYLGDGPKLVRELFRV R V V Q K Y 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 9 0 971.56515 P62191 P62191 250 258 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0017819 124.08 By MS/MS By matching 6.75 0.829 2 1 1 3 1 22810000 22745000 64515 15384 1141 16252 39336;39337;39338;39339 31470 31470 1 232540 66110 VVGVFTVPDKDGK FGQEVYSHLRKEGHRVVGVFTVPDKDGKAD HRVVGVFTVPDKDGKADPLALAAEKDGTPV R V V G K A 0 0 0 2 0 0 0 2 0 0 0 2 0 1 1 0 1 0 0 4 0 0 13 1 1359.7398 Q3SY69 Q3SY69 48 60 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 3 0.027607 99.752 By MS/MS 4 0 1 1 555790 555790 0 15385 1578 16253 39340 31471 31471 1 52303 0 VVGVLLGSWQK VDHFNRIGKVGNQKRVVGVLLGSWQKKVLD NQKRVVGVLLGSWQKKVLDVSNSFAVPFDE R V V Q K K 0 0 0 0 0 1 0 2 0 0 2 1 0 0 0 1 0 1 0 3 0 0 11 0 1184.6917 P51665 P51665 35 45 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 1.2898E-06 213.85 By MS/MS 7 0 1 1 1214900 1214900 0 15386 1005 16254 39341 31472 31472 1 19072 0 VVHQNHGER PVGGHILSYLLEKSRVVHQNHGERNFHIFY LLEKSRVVHQNHGERNFHIFYQLLEGGEEE R V V E R N 0 1 1 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 2 0 0 9 0 1074.5319 O00159 O00159 227 235 MYO1C Unconventional myosin-Ic yes yes 2 0.0014985 127.68 By MS/MS 4.5 0.5 1 1 2 755250 755250 0 15387 85 16255 39342;39343 31473 31473 1 69937 0 VVILMELEVLK QIHRFIVNTLKDGRRVVILMELEVLKSAEA DGRRVVILMELEVLKSAEAVGVKIGNPVPY R V V L K S 0 0 0 0 0 0 2 0 0 1 3 1 1 0 0 0 0 0 0 3 0 0 11 0 1284.7727 P27694 P27694 93 103 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.0057579 117.89 By MS/MS 5 0 1 1 33484 33484 0 15388 744 16256 39344 31474 31474 371 0 335.82 0 VVIQSNDDIASR MMDDLELIGLDYLWRVVIQSNDDIASRAID LWRVVIQSNDDIASRAIDLLKEIYTNLGPR R V V S R A 1 1 1 2 0 1 0 0 0 2 0 0 0 0 0 2 0 0 0 2 0 0 12 0 1315.6732 Q93008 Q93008 777 788 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 1.1518E-06 199.8 By MS/MS 2.83 1.34 1 2 1 1 1 6 11346000 11346000 0 15389 2085 16257 39345;39346;39347;39348;39349;39350 31475;31476;31477;31478 31476 3 2669300 0 VVKDLSSEELAAFQK VVRSIIGSARSLGIRVVKDLSSEELAAFQK VVKDLSSEELAAFQKERAIFLAAQKEADLA R V V Q K E 2 0 0 1 0 1 2 0 0 0 2 2 0 1 0 2 0 0 0 2 0 0 15 1 1662.8829 Q9Y3B7 Q9Y3B7 155 169 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 0.0001897 203.29 By MS/MS 9 0 2 2 4467700 4467700 0 15390 2866 16258 39351;39352 31479;31480 31480 2 87926 0 VVLASQPDLECGFSR LCHGLSDLARVPSPKVVLASQPDLECGFSR VVLASQPDLECGFSRDLFIQWCQDPKNSII K V V S R D 1 1 0 1 1 1 1 1 0 0 2 0 0 1 1 2 0 0 0 2 0 0 15 0 1676.8192 Q9P2I0 Q9P2I0 325 339 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 2 9.8704E-05 182.25 By MS/MS 4 0 1 1 1006100 1006100 0 15391 2683 16259 39353 31481;31482;31483 31481 3 94682 0 VVLAYEPVWAIGTGK EQTKVIADNVKDWSKVVLAYEPVWAIGTGK VVLAYEPVWAIGTGKTATPQQAQEVHEKLR K V V G K T 2 0 0 0 0 0 1 2 0 1 1 1 0 0 1 0 1 1 1 3 0 0 15 0 1601.8817 P60174 P60174 161 175 TPI1 Triosephosphate isomerase yes yes 2 0.0063884 99.5 By MS/MS 8 0 1 1 90702 90702 0 15392 1089 16260 39354 31484 31484 1 1145.1 0 VVLDDKDYFLFR KVGDKVLLPEYGGTKVVLDDKDYFLFRDGD GTKVVLDDKDYFLFRDGDILGKYVD_____ K V V F R D 0 1 0 3 0 0 0 0 0 0 2 1 0 2 0 0 0 0 1 2 0 0 12 1 1528.7926 P61604 P61604 81 92 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.030362 66.267 By MS/MS 10 0 1 1 51989 51989 0 15393 1126 16261 39355 31485 31485 1 2802 0 VVLEHEEVR KTTNPSKYIRFIYNRVVLEHEEVRAGAVSA RFIYNRVVLEHEEVRAGAVSALAKFGAQNE R V V V R A 0 1 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 1108.5877 Q9Y678 Q9Y678 480 488 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0020347 120.87 By MS/MS 5 0.816 1 1 1 3 4541100 4541100 0 15394 2933 16262 39356;39357;39358 31486;31487 31487 2 310160 0 VVLEHEEVRAGAVSALAK KTTNPSKYIRFIYNRVVLEHEEVRAGAVSA EHEEVRAGAVSALAKFGAQNEEMLPSILVL R V V A K F 4 1 0 0 0 0 3 1 1 0 2 1 0 0 0 1 0 0 0 4 0 0 18 1 1877.0371 Q9Y678 Q9Y678 480 497 COPG1 Coatomer subunit gamma-1 yes yes 3 0.0027763 95.822 By MS/MS 4.5 0.5 1 1 2 4809300 4809300 0 15395 2933 16263 39359;39360 31488 31488 1 364560 0 VVLENEAVR RTPVPSKYIRFIFNRVVLENEAVRAAAVSA RFIFNRVVLENEAVRAAAVSALAKFGAQNE R V V V R A 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 1027.5662 Q9UBF2 Q9UBF2 480 488 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00059779 143.7 By MS/MS 4.5 0.5 1 1 2 14049000 14049000 0 15396 2697 16264 39361;39362 31489;31490;31491 31489 3 1138700 0 VVLFEMEAR KGSITISAEEIKDNRVVLFEMEARKLDNKD EIKDNRVVLFEMEARKLDNKDLFGKSDPYL R V V A R K 1 1 0 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 2 0 0 9 0 1092.5638 O75131 O75131 140 148 CPNE3 Copine-3 yes yes 2 0.0040624 110.87 By MS/MS 6 0 1 1 1474600 1474600 0 15397 294 16265 39363 31492 31492 1 10137 0 VVLGEFGVR ______________________________ EEMRSRVVLGEFGVRNVHTTDFPGNYSGYD R V V V R N 0 1 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 9 0 974.55492 O15160 O15160 14 22 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0025533 114.28 By MS/MS 7 0 1 1 4571000 4571000 0 15398 166 16266 39364 31493 31493 1 71756 0 VVLIGDSGVGK ______________________________ YLFKVVLIGDSGVGKSNLLSRFTRNEFNLE K V V G K S 0 0 0 1 0 0 0 3 0 1 1 1 0 0 0 1 0 0 0 3 0 0 11 0 1042.6023 P62491;Q15907 P62491 14 24 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0024112 110.76 By MS/MS 8.5 0.5 1 1 2 3057500 3057500 0 15399 1161 16267 39365;39366 31494;31495 31495 2 52034 0 VVLIVGETGSGK FEKQEEIVKIIKENKVVLIVGETGSGKTTQ ENKVVLIVGETGSGKTTQIPQFLLDDCFKN K V V G K T 0 0 0 0 0 0 1 3 0 1 1 1 0 0 0 1 1 0 0 3 0 0 12 0 1157.6656 Q9H6S0 Q9H6S0 211 222 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.00084578 128.03 By MS/MS 3 0 1 1 677980 677980 0 15400 2458 16268 39367 31496 31496 1 12405 0 VVLLEDLASQVGLR QSFLTEFINYIKQSKVVLLEDLASQVGLRT KVVLLEDLASQVGLRTQDTINRIQDLLAEG K V V L R T 1 1 0 1 0 1 1 1 0 0 4 0 0 0 0 1 0 0 0 3 0 0 14 0 1510.8719 Q96HY6 Q96HY6 228 241 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 4.1325E-07 205.07 By MS/MS 7 0 1 1 45564 45564 0 15401 2169 16269 39368 31497;31498 31498 2 715.27 0 VVLLGAPNAGK LVHHPDMPENSRVLRVVLLGAPNAGKSTLS RVLRVVLLGAPNAGKSTLSNQLLGRKVFPV R V V G K S 2 0 1 0 0 0 0 2 0 0 2 1 0 0 1 0 0 0 0 2 0 0 11 0 1037.6233 O75616 O75616 116 126 ERAL1 GTPase Era, mitochondrial yes yes 2 0.0080662 95.815 By MS/MS 8 0.816 1 1 1 3 8396400 8396400 0 15402 339 16270 39369;39370;39371 31499 31499 1 131680 0 VVLLGEGCVGK GGGGAAAAGRAYSFKVVLLGEGCVGKTSLV YSFKVVLLGEGCVGKTSLVLRYCENKFNDK K V V G K T 0 0 0 0 1 0 1 3 0 0 2 1 0 0 0 0 0 0 0 3 0 0 11 0 1129.6165 Q9UL25 Q9UL25 22 32 RAB21 Ras-related protein Rab-21 yes yes 2 0.0013953 113.71 By MS/MS 8.5 0.5 1 1 2 2012000 2012000 0 15403 2769 16271 39372;39373 31500;31501 31501 2 29940 0 VVLLTEVDKLTK AQSQQLETNSQRDFKVVLLTEVDKLTKDAQ DFKVVLLTEVDKLTKDAQHALRRTMEKYMS K V V T K D 0 0 0 1 0 0 1 0 0 0 3 2 0 0 0 0 2 0 0 3 0 0 12 1 1356.8228 P40938 P40938 131 142 RFC3 Replication factor C subunit 3 yes yes 2;3 0.0020153 108.9 By MS/MS 7 0 2 2 2408500 2408500 0 15404 864 16272 39374;39375 31502;31503 31503 2 37809 0 VVLLTGETSTDLK YMDWYEKFQDRLNKKVVLLTGETSTDLKLL KKVVLLTGETSTDLKLLGKGNIIISTPEKW K V V L K L 0 0 0 1 0 0 1 1 0 0 3 1 0 0 0 1 3 0 0 2 0 0 13 0 1374.7606 O75643 O75643 1405 1417 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.337E-07 208.84 By MS/MS 1.5 0.5 1 1 2 1867500 1867500 0 15405 340 16273 39376;39377 31504;31505 31505 2 558150 0 VVLPCNLLR DREVLRVIFPTGDSKVVLPCNLLRMIWNAQ PTGDSKVVLPCNLLRMIWNAQKIFHINPRL K V V L R M 0 1 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 9 0 1082.627 P24928 P24928 977 985 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.011924 97.068 By MS/MS 2 0 1 1 399630 399630 0 15406 717 16274 39378 31506 31506 1 135170 0 VVLPIEAPIR FLEPGDLRLLDVDNRVVLPIEAPIRMMITS DVDNRVVLPIEAPIRMMITSQDVLHSWAVP R V V I R M 1 1 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 0 2 0 0 10 0 1105.6859 P00403 P00403 142 151 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 0.025941 83.948 By MS/MS 9.5 0.5 1 1 2 6927600 6927600 0 15407 444 16275 39379;39380 31507 31507 1 148500 0 VVLPTFILEPR WTLLKQVRPGMDLSKVVLPTFILEPRSFLD DLSKVVLPTFILEPRSFLDKLSDYYYHADF K V V P R S 0 1 0 0 0 0 1 0 0 1 2 0 0 1 2 0 1 0 0 2 0 0 11 0 1282.7649 Q9BZF1 Q9BZF1 423 433 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 0.0044399 105.4 By MS/MS 4.5 0.5 1 1 2 713070 713070 0 15408 2377 16276 39381;39382 31508;31509 31508 2 59751 0 VVLPTFILER MHLLSQVRLGMDLTKVVLPTFILERRSLLE MDLTKVVLPTFILERRSLLEMYADFFAHPD K V V E R R 0 1 0 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 0 2 0 0 10 0 1185.7121 Q96SU4 Q96SU4 391 400 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 0.0008733 126.07 By MS/MS 5 0.816 1 1 1 3 540590 540590 0 15409 2236 16277 39383;39384;39385 31510 31510 1 32290 0 VVLPYLVPK FALDGLKQVMAIKSRVVLPYLVPKLTTPPV MAIKSRVVLPYLVPKLTTPPVNTRVLAFLS R V V P K L 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 0 0 1 3 0 0 9 0 1026.6478 Q92616 Q92616 2075 2083 GCN1L1 Translational activator GCN1 yes yes 2 0.028254 85.359 By MS/MS 3 1.41 1 1 1 1 1 5 3626300 3626300 0 15410 2064 16278 39386;39387;39388;39389;39390 31511 31511 1 958440 0 VVLVLAGR ______________________________ KFMKPGKVVLVLAGRYSGRKAVIVKNIDDG K V V G R Y 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 3 0 0 8 0 825.54362 P61353 P61353 10 17 RPL27 60S ribosomal protein L27 yes yes 2 0.010939 109.7 By MS/MS By matching 9.33 0.471 2 1 2 1 7562300 7507200 55133 15411 1122 16279 39391;39392;39393 31512;31513 31512 2 264700 125720 VVLVNNILQNAQER DLDPYVKKLLNARRRVVLVNNILQNAQERL RVVLVNNILQNAQERLRRLNHSVAKETARR R V V E R L 1 1 3 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 14 0 1608.8948 O95295 O95295 92 105 SNAPIN SNARE-associated protein Snapin yes yes 2 1.5791E-33 312.78 By MS/MS 10 0 1 1 255310 255310 0 15412 402 16280 39394 31514 31514 1 13760 0 VVMALGDYMGASCHACIGGTNVR LVLAPTRELAQQIQKVVMALGDYMGASCHA MGASCHACIGGTNVRAEVQKLQMEAPHIIV K V V V R A 3 1 1 1 2 0 0 4 1 1 1 0 2 0 0 1 1 0 1 3 0 0 23 0 2438.0963 P60842 P60842 119 141 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 3 1.183E-05 111.65 By MS/MS 6 0.707 1 2 1 4 24365000 24365000 0 15413 1097 16281;16282 39395;39396;39397;39398 31515;31516;31517 31517 629;630 2 179710 0 VVNEINIEDLCLTK KDSLINLKIQKENPKVVNEINIEDLCLTKA KVVNEINIEDLCLTKAAYCRCWRSKTFPAC K V V T K A 0 0 2 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 2 0 0 14 0 1658.8549 Q8N5K1 Q8N5K1 82 95 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 3.4807E-17 296.28 By MS/MS 10 0 1 1 1310000 1310000 0 15414 1923 16283 39399 31518 31518 1 70604 0 VVNGAAASQPPSK IRQQLAEKAKAGELKVVNGAAASQPPSKRK LKVVNGAAASQPPSKRKRRWDQTADQTPGA K V V S K R 3 0 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 13 0 1224.6463 O75533 O75533 183 195 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0067487 98.407 By MS/MS 3 0 1 1 155750 155750 0 15415 332 16284 39400 31519 31519 1 2849.8 0 VVNGPEILNK LARQIGKMLNAREPKVVNGPEILNKYVGES AREPKVVNGPEILNKYVGESEANIRKLFAD K V V N K Y 0 0 2 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 0 1081.6132 P46459 P46459 284 293 NSF Vesicle-fusing ATPase yes yes 2 0.0079202 99.013 By MS/MS 5 0 1 1 3536200 3536200 0 15416 912 16285 39401 31520 31520 1 35467 0 VVNIVPVIAK SLRPLDIEFMKRLSKVVNIVPVIAKADTLT KRLSKVVNIVPVIAKADTLTLEERVHFKQR K V V A K A 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 4 0 0 10 0 1050.6801 Q9UHD8 Q9UHD8 436 445 SEPT9 Septin-9 yes yes 2 0.010505 93.195 By MS/MS 5 0 1 1 970990 970990 0 15417 2730 16286 39402 31521 31521 1 9738.5 0 VVNQLAAAYEQDLLPGGCTLR VHYGARSIKHEVERRVVNQLAAAYEQDLLP AAYEQDLLPGGCTLRITVEDSDKQLLKSPE R V V L R I 3 1 1 1 1 2 1 2 0 0 4 0 0 0 1 0 1 0 1 2 0 0 21 0 2287.1631 Q9H078 Q9H078 630 650 CLPB Caseinolytic peptidase B protein homolog yes yes 2;3 1.6192E-08 209.6 By MS/MS 6 0 2 2 3960600 3960600 0 15418 2402 16287 39403;39404 31522;31523 31522 2 27226 0 VVNSCHR TEPLIQTAKTTLGSKVVNSCHRQMAEIAVN AKTTLGSKVVNSCHRQMAEIAVNAVLTVAD K V V H R Q 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 2 0 0 7 0 870.41302 P48643 P48643 177 183 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0043724 158.12 By MS/MS 5 1.41 1 1 1 1 1 5 6924400 6924400 0 15419 940 16288 39405;39406;39407;39408;39409 31524;31525;31526 31525 3 53393 0 VVNTSDPDMR MMMVLPLLIFVLLPKVVNTSDPDMRREMEQ VLLPKVVNTSDPDMRREMEQSMNMLNSNHE K V V M R R 0 1 1 2 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 0 0 10 0 1132.5183 Q9NPA0 Q9NPA0 182 191 EMC7 ER membrane protein complex subunit 7 yes yes 2 0.0041253 107.55 By MS/MS 9 0 1 1 374630 374630 0 15420 2529 16289 39410 31527 31527 1 7372.8 0 VVPIASLTPYQSK AGPSLSHTSGGTQSKVVPIASLTPYQSKWT SKVVPIASLTPYQSKWTICARVTNKSQIRT K V V S K W 1 0 0 0 0 1 0 0 0 1 1 1 0 0 2 2 1 0 1 2 0 0 13 0 1401.7868 P27694 P27694 184 196 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.0010916 133.42 By MS/MS 5 0 1 1 4108400 4108400 0 15421 744 16290 39411 31528 31528 1 41206 0 VVPSYMQAVNR PSEPNTAALQAALARVVPSYMQAVNRERER ALARVVPSYMQAVNRERERQVVMAVLEALT R V V N R E 1 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 3 0 0 11 0 1262.6441 Q8TEX9 Q8TEX9 751 761 IPO4 Importin-4 yes yes 2 0.0078669 96.342 By MS/MS 3 0 1 1 333950 333950 0 15422 2005 16291 39412 31529 31529 1 6110.3 0 VVQAASATLPTVPQK AEQQQVVQIPQQALRVVQAASATLPTVPQK VVQAASATLPTVPQKPSQNFQIQAAEPTPT R V V Q K P 3 0 0 0 0 2 0 0 0 0 1 1 0 0 2 1 2 0 0 3 0 0 15 0 1508.8562 Q02086 Q02086 323 337 SP2 Transcription factor Sp2 yes yes 2 0.0038965 107.83 By MS/MS By MS/MS 5 2.74 2 2 2 2 2 1 2 2 1 1 9 8 29609000 17576000 12033000 15423 1274 16292 39413;39414;39415;39416;39417;39418;39419;39420;39421;39422;39423;39424;39425;39426;39427;39428;39429 31530;31531;31532;31533;31534;31535;31536;31537;31538;31539;31540 31538 11 2627800 14254000 VVQGSPEVPGITVR VALALQQALGQELARVVQGSPEVPGITVRV RVVQGSPEVPGITVRVLQALATLLSSPHGG R V V V R V 0 1 0 0 0 1 1 2 0 1 0 0 0 0 2 1 1 0 0 4 0 0 14 0 1436.7987 Q8N201 Q8N201 1391 1404 INTS1 Integrator complex subunit 1 yes yes 2 0.030134 92.906 By MS/MS 2 0 1 1 541670 541670 0 15424 1907 16293 39430 31541 31541 1 183210 0 VVQHLCQR LLRFRQHLLGTSPERVVQHLCQRRVEPPEL LGTSPERVVQHLCQRRVEPPELPADLQHWI R V V Q R R 0 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 1038.5393 Q8WUY1 Q8WUY1 163 170 THEM6 Protein THEM6 yes yes 2 0.0018107 145.04 By MS/MS 9 0 1 1 2621200 2621200 0 15425 2019 16294 39431 31542 31542 1 51585 0 VVQLDVR PHIENGGVAVLTGKKVVQLDVRDNMVKLND VAVLTGKKVVQLDVRDNMVKLNDGSQITYE K V V V R D 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 7 0 827.4865 O95831 O95831 233 239 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.040933 96.492 By MS/MS By matching 5.33 0.471 2 1 2 1 11822000 11753000 69090 15426 429 16295 39432;39433;39434 31543 31543 1 114140 58021 VVQMLGSLGGQINK LSSNEAISLEEIRIRVVQMLGSLGGQINKN RVVQMLGSLGGQINKNLLTVTSSDEMMKSY R V V N K N 0 0 1 0 0 2 0 3 0 1 2 1 1 0 0 1 0 0 0 2 0 0 14 0 1442.7915 P78527 P78527 855 868 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.9591E-16 248.98 By MS/MS 2.4 1.02 1 2 1 1 5 3279100 3279100 0 15427 1225 16296;16297 39435;39436;39437;39438;39439 31544;31545;31546 31544 735 3 908140 0 VVQNVFQFR LIQPKIEQPFKLVEKVVQNVFQFRRKYCHR FKLVEKVVQNVFQFRRKYCHRGLRMLFPEA K V V F R R 0 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 9 0 1135.6138 Q8WVM0 Q8WVM0 248 256 TFB1M Dimethyladenosine transferase 1, mitochondrial yes yes 2 6.0565E-07 188.81 By MS/MS 7 0 1 1 844750 844750 0 15428 2027 16298 39440 31547 31547 1 13261 0 VVRDPQGIR LLQDNIADAVACAKRVVRDPQGIRAWVAWR VACAKRVVRDPQGIRAWVAWRNRCQNRDVR R V V I R A 0 2 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 2 0 0 9 1 1038.5934 P61626 P61626 117 125 LYZ Lysozyme C yes yes 3 0.050965 66.692 By MS/MS 2 0.816 1 1 1 3 319670 0 319670 15429 1128 16299 39441;39442;39443 31548 31548 1 0 259200 VVSAAVQAQHSATK MDPNFISVRQQFLLKVVSAAVQAQHSATKV KVVSAAVQAQHSATKVKDPTEEATPTPFGK K V V T K V 4 0 0 0 0 2 0 0 1 0 0 1 0 0 0 2 1 0 0 3 0 0 14 0 1395.747 Q9H2M9 Q9H2M9 1220 1233 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 6.1917E-05 171.62 By MS/MS 3 0 1 1 355500 355500 0 15430 2431 16300 39444 31549 31549 1 6504.7 0 VVSEDFLQDVSASTK KMNKKMEEVKEANIRVVSEDFLQDVSASTK VVSEDFLQDVSASTKSLQELFLAHILSPWG R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.3634E-43 355.26 By MS/MS 3.57 1.59 1 1 1 2 1 1 7 45931000 45931000 0 15431 543 16301 39445;39446;39447;39448;39449;39450;39451 31550;31551;31552;31553;31554;31555;31556 31553 7 3808300 0 VVSGAANVIGPK CGLPQPCPEEHLAFRVVSGAANVIGPKICL AFRVVSGAANVIGPKICLEDKMLMSSVKDN R V V P K I 2 0 1 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 0 3 0 0 12 0 1110.6397 P98173 P98173 74 85 FAM3A Protein FAM3A yes yes 2 0.0018218 112.85 By MS/MS 8 0.816 1 1 1 3 1413900 1413900 0 15432 1251 16302 39452;39453;39454 31557 31557 1 21442 0 VVSPWNSEDAK SQCFAAWYGHCPGLKVVSPWNSEDAKGLIK PGLKVVSPWNSEDAKGLIKSAIRDNNPVVV K V V A K G 1 0 1 1 0 0 1 0 0 0 0 1 0 0 1 2 0 1 0 2 0 0 11 0 1230.5881 P11177 P11177 174 184 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.001048 120.63 By MS/MS 7.5 0.5 1 1 2 15024000 15024000 0 15433 575 16303 39455;39456 31558;31559 31558 2 227580 0 VVSQYHELVVQAR DNVVKKVQAAQSEAKVVSQYHELVVQARDD AKVVSQYHELVVQARDDFKRELDSITPEVL K V V A R D 1 1 0 0 0 2 1 0 1 0 1 0 0 0 0 1 0 0 1 4 0 0 13 0 1526.8205 Q16891 Q16891 354 366 IMMT MICOS complex subunit MIC60 yes yes 2;3 0.00045644 118.76 By MS/MS 4.33 0.471 2 1 3 5351100 5351100 0 15434 1563 16304 39457;39458;39459 31560;31561 31561 2 481090 0 VVSSIEQK VAYKNVVGARRSSWRVVSSIEQKTEGAEKK ARRSSWRVVSSIEQKTEGAEKKQQMAREYR R V V Q K T 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 2 0 0 8 0 888.49165 P63104 P63104 61 68 YWHAZ 14-3-3 protein zeta/delta yes yes 2 0.018237 101.6 By MS/MS 7 0.816 1 1 1 3 8559700 8559700 0 15435 1195 16305 39460;39461;39462 31562 31562 1 96776 0 VVSSIEQKTEGAEK VAYKNVVGARRSSWRVVSSIEQKTEGAEKK RVVSSIEQKTEGAEKKQQMAREYREKIETE R V V E K K 1 0 0 0 0 1 3 1 0 1 0 2 0 0 0 2 1 0 0 2 0 0 14 1 1503.7781 P63104 P63104 61 74 YWHAZ 14-3-3 protein zeta/delta yes yes 2 8.8649E-07 216.83 By MS/MS 8 0 1 1 1030100 1030100 0 15436 1195 16306 39463 31563 31563 1 13005 0 VVSSIEQKTEGAEKK VAYKNVVGARRSSWRVVSSIEQKTEGAEKK VVSSIEQKTEGAEKKQQMAREYREKIETEL R V V K K Q 1 0 0 0 0 1 3 1 0 1 0 3 0 0 0 2 1 0 0 2 0 0 15 2 1631.873 P63104 P63104 61 75 YWHAZ 14-3-3 protein zeta/delta yes yes 3 0.0026216 108.97 By MS/MS 8 0 1 1 1312500 1312500 0 15437 1195 16307 39464 31564 31564 1 16570 0 VVSSSIVDKYIGESAR LARAVASQLDCNFLKVVSSSIVDKYIGESA VSSSIVDKYIGESARLIREMFNYARDHQPC K V V A R L 1 1 0 1 0 0 1 1 0 2 0 1 0 0 0 4 0 0 1 3 0 0 16 1 1708.8996 P62333 P62333 198 213 PSMC6 26S protease regulatory subunit 10B yes yes 2;3 0.00037057 190.57 By MS/MS 7.5 0.5 2 2 4 13736000 13736000 0 15438 1159 16308 39465;39466;39467;39468 31565;31566;31567 31566 3 209800 0 VVSTSLDCLQK YFLPFELACQSKSPRVVSTSLDCLQKLIAY KSPRVVSTSLDCLQKLIAYGHITGNAPDSG R V V Q K L 0 0 0 1 1 1 0 0 0 0 2 1 0 0 0 2 1 0 0 2 0 0 11 0 1248.6384 Q9Y6D5 Q9Y6D5 83 93 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 1.2621E-06 187.5 By MS/MS 2 0 1 1 829190 829190 0 15439 2940 16309 39469 31568 31568 1 280460 0 VVSWLVSSDNPQPEMAPPVHEPR EISDDNARLPCFNGRVVSWLVSSDNPQPEM DNPQPEMAPPVHEPRAELAPPAPPLPPLPP R V V P R A 1 1 1 1 0 1 2 0 1 0 1 0 1 0 5 3 0 1 0 4 0 0 23 0 2570.2588 O14641 O14641 85 107 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 6 0.054808 19.039 By MS/MS 9 0 1 1 241260 0 241260 15440 128 16310 39470 31569 31569 0 0 550160 VVTCSLLALK PQTVPEEEREAKFYRVVTCSLLALKRLLCL AKFYRVVTCSLLALKRLLCLLPDNELDSLE R V V L K R 1 0 0 0 1 0 0 0 0 0 3 1 0 0 0 1 1 0 0 2 0 0 10 0 1102.642 O94822 O94822 224 233 LTN1 E3 ubiquitin-protein ligase listerin yes yes 2 0.010549 96.668 By MS/MS 2 0 1 1 90321 90321 0 15441 368 16311 39471 31570 31570 1 30550 0 VVTDTDETELAR IEEKRGVFNVQMEPKVVTDTDETELARQME EPKVVTDTDETELARQMERLERENAEVDGD K V V A R Q 1 1 0 2 0 0 2 0 0 0 1 0 0 0 0 0 3 0 0 2 0 0 12 0 1347.6518 P05198 P05198 277 288 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 3.517E-25 300.43 By MS/MS By MS/MS 7.14 2.7 1 2 2 1 1 5 2 50750000 50006000 743710 15442 489 16312 39472;39473;39474;39475;39476;39477;39478 31571;31572;31573;31574;31575;31576;31577;31578;31579 31575 9 899350 1298300 VVTLLSDPENIVK YDTELQALHEMVQQKVVTLLSDPENIVKQT QKVVTLLSDPENIVKQTLMENGITRLCVFF K V V V K Q 0 0 1 1 0 0 1 0 0 1 2 1 0 0 1 1 1 0 0 3 0 0 13 0 1425.8079 Q99570 Q99570 541 553 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 2 2.455E-05 185.96 By MS/MS 4 0.816 1 1 1 3 737760 737760 0 15443 2251 16313 39479;39480;39481 31580;31581;31582 31582 3 36607 0 VVTNCQER LRAPDVARLREEQEKVVTNCQERIQHWKKV LREEQEKVVTNCQERIQHWKKVDNDYNALR K V V E R I 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 8 0 1004.4709 O94763 O94763 40 47 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 2 0.049281 82.75 By MS/MS 5 0 1 1 294060 294060 0 15444 363 16314 39482 31583 31583 1 2949.3 0 VVTQNICQYR GIRLSAEQAKQLVSRVVTQNICQYRSLQYS QLVSRVVTQNICQYRSLQYSRQEGLDGGLP R V V Y R S 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 0 1 0 1 2 0 0 10 0 1279.6343 Q8N163 Q8N163 748 757 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 1.6047E-05 170.5 By MS/MS 3.5 0.5 1 1 2 1636100 1636100 0 15445 1901 16315 39483;39484 31584;31585 31584 2 62076 0 VVTSEDQVQEGTK YKQENEMLSSSRDQRVVTSEDQVQEGTKVL QRVVTSEDQVQEGTKVLKLKTKMADKENMK R V V T K V 0 0 0 1 0 2 2 1 0 0 0 1 0 0 0 1 2 0 0 3 0 0 13 0 1418.6889 Q8WWK9 Q8WWK9 58 70 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 4.4876E-24 272.1 By MS/MS 4.5 0.5 1 1 2 4913400 4913400 0 15446 2035 16316 39485;39486 31586;31587 31586 2 266540 0 VVTVGQFK VRGDFDENLNYPEQKVVTVGQFKIGLIHGH LNYPEQKVVTVGQFKIGLIHGHQVIPWGDM K V V F K I 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 3 0 0 8 0 876.5069 Q9UBQ0 Q9UBQ0 74 81 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 2 0.030906 89.752 By MS/MS 9 0 1 1 1549600 1549600 0 15447 2702 16317 39487 31588 31588 1 30497 0 VVVCDNGTGFVK ______________________________ GRKVVVCDNGTGFVKCGYAGSNFPEHIFPA K V V V K C 0 0 1 1 1 0 0 2 0 0 0 1 0 1 0 0 1 0 0 4 0 0 12 0 1293.6387 P61160 P61160 8 19 ACTR2 Actin-related protein 2 yes yes 2 0.019197 87.789 By MS/MS 7.5 0.5 1 1 2 1255500 1255500 0 15448 1112 16318 39488;39489 31589 31589 1 18414 0 VVVDALSGLK LPPACTRAERREVERVVVDALSGLKGDLAG REVERVVVDALSGLKGDLAGRYYRLSEMTE R V V L K G 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 3 0 0 10 0 999.59645 P12532 P12532 190 199 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.0043033 107.15 By MS/MS 8 0.816 1 1 1 3 2668600 2668600 0 15449 593 16319 39490;39491;39492 31590 31590 1 41585 0 VVVDALSGLKGDLAGR LPPACTRAERREVERVVVDALSGLKGDLAG VVDALSGLKGDLAGRYYRLSEMTEAEQQQL R V V G R Y 2 1 0 2 0 0 0 3 0 0 3 1 0 0 0 1 0 0 0 3 0 0 16 1 1568.8886 P12532 P12532 190 205 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.0019428 133.16 By MS/MS 7 0 1 1 1047600 1047600 0 15450 593 16320 39493 31591 31591 1 16446 0 VVVEPVGPVGFKPETFRK LLYQHFWCLPVIKKRVVVEPVGPVGFKPET EPVGPVGFKPETFRKFLALYLHGAA_____ R V V R K F 0 1 0 0 0 0 2 2 0 0 0 2 0 2 3 0 1 0 0 5 0 0 18 2 1984.1146 Q9BZE1 Q9BZE1 396 413 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 4 0.046156 50.158 By MS/MS 7 0 1 1 1148000 1148000 0 15451 2376 16321 39494 31592 31592 1 18022 0 VVVQGIPEVSR SMYYVLQFLKEDLPKVVVQGIPEVSRAVIH DLPKVVVQGIPEVSRAVIHIDEQSGKEKYK K V V S R A 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 4 0 0 11 0 1181.6768 O14802 O14802 1199 1209 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0064925 99.973 By MS/MS 3.5 0.5 1 1 2 1836600 1836600 0 15452 139 16322 39495;39496 31593 31593 1 52439 0 VVVQVLAEEPEAVLK EDAFRYMAQGKHIGKVVVQVLAEEPEAVLK VVVQVLAEEPEAVLKGAKPKLMSAISKTFC K V V L K G 2 0 0 0 0 1 3 0 0 0 2 1 0 0 1 0 0 0 0 5 0 0 15 0 1621.9291 P49327 P49327 1852 1866 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 2.8524E-07 239.48 By MS/MS 3.1 1.58 2 2 2 2 1 1 10 15044000 15044000 0 15453 946 16323 39497;39498;39499;39500;39501;39502;39503;39504;39505;39506 31594;31595;31596;31597;31598;31599;31600 31599 7 2381500 0 VVVSASTR TQHHVEALVEHQNGKVVVSASTREWAIKKH VEHQNGKVVVSASTREWAIKKHLYSTRNVV K V V T R E 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 3 0 0 8 0 817.46577 Q9H0U6 Q9H0U6 101 108 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 0.023448 95.815 By MS/MS 9 0 1 1 2573000 2573000 0 15454 2417 16324 39507 31601 31601 1 50636 0 VVVSHSTHR RTKMVYCKIDQTQRKVVVSHSTHRTFGKQQ DQTQRKVVVSHSTHRTFGKQQWQQLYDTLN K V V H R T 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 2 1 0 0 3 0 0 9 0 1020.5465 Q7L2H7 Q7L2H7 332 340 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 1.9362E-10 209.84 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 8330300 8330300 0 15455 1762 16325 39508;39509;39510;39511;39512 31602;31603;31604;31605 31603 4 136400 0 VVVTVEQTEEELER YLEKEEKCLPPPSIRVVVTVEQTEEELERA RVVVTVEQTEEELERAASTIKEVAQAVLL_ R V V E R A 0 1 0 0 0 1 5 0 0 0 1 0 0 0 0 0 2 0 0 4 0 0 14 0 1658.8363 O15269 O15269 446 459 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 6.0119E-44 332.53 By MS/MS 6 0 1 1 37907000 37907000 0 15456 177 16326 39513 31606 31606 1 260580 0 VVVVDCKK HHVKDISCLNRDPARVVVVDCKKEAFRLQP LNRDPARVVVVDCKKEAFRLQPYNGVALRP R V V K K E 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 4 0 0 8 1 945.53174 Q3ZCQ8 Q3ZCQ8 244 251 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.018109 104.37 By MS/MS 10 0 1 1 144400 144400 0 15457 1580 16327 39514 31607 31607 1 7782.4 0 VVVVGDQSAGK SDYDASYNTQDHLPRVVVVGDQSAGKTSVL HLPRVVVVGDQSAGKTSVLEMIAQARIFPR R V V G K T 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 0 4 0 0 11 0 1057.5768 O60313 O60313 291 301 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.026174 82.417 By MS/MS 4.5 0.5 1 1 2 1022600 1022600 0 15458 254 16328 39515;39516 31608 31608 1 70494 0 VVVVQAISALCQK KQISSFMSEISDEFKVVVVQAISALCQKYP FKVVVVQAISALCQKYPRKHAVLMNFLFTM K V V Q K Y 2 0 0 0 1 2 0 0 0 1 1 1 0 0 0 1 0 0 0 4 0 0 13 0 1413.8014 Q9Y678;Q9UBF2 Q9Y678 377 389 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 6.824E-05 176.95 By MS/MS 4 0 1 1 957630 957630 0 15459 2933;2697 16329 39517 31609 31609 1 90120 0 VVVVTGANTGIGKETAK LSSGVCTSTVQLPGKVVVVTGANTGIGKET VVTGANTGIGKETAKELAQRGARVYLACRD K V V A K E 2 0 1 0 0 0 1 3 0 1 0 2 0 0 0 0 3 0 0 4 0 0 17 1 1642.9254 Q8TC12 Q8TC12 43 59 RDH11 Retinol dehydrogenase 11 yes yes 3 0.051128 59.513 By MS/MS 8 0 1 1 1113300 1113300 0 15460 1988 16330 39518 31610 31610 1 14055 0 VVWVEESDKR AVGRVGSTSENITQKVVWVEESDKRSFLLD NITQKVVWVEESDKRSFLLDLLNATGKDSL K V V K R S 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 3 0 0 10 1 1245.6354 O00571 O00571 419 428 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.00010318 161.27 By MS/MS 5 0 1 1 11718000 11718000 0 15461 116 16331 39519 31611 31611 1 117520 0 VVYGGGAAEISCALAVSQEADK HDALCVIRNLIRDNRVVYGGGAAEISCALA AEISCALAVSQEADKCPTLEQYAMRAFADA R V V D K C 5 0 0 1 1 1 2 3 0 1 1 1 0 0 0 2 0 0 1 3 0 0 22 0 2194.0576 P48643 P48643 418 439 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 6.7849E-09 262.73 By MS/MS 6 0 2 2 3230300 3230300 0 15462 940 16332 39520;39521 31612;31613;31614 31612 3 22206 0 VVYQPGYPK KRKMGARETRRLLERVVYQPGYPKSIASTA RRLLERVVYQPGYPKSIASTARWYLLRHLY R V V P K S 0 0 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 2 2 0 0 9 0 1049.5546 Q6PGP7 Q6PGP7 1508 1516 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.040106 80.229 By MS/MS 3 0 1 1 619760 619760 0 15463 1716 16333 39522 31615 31615 1 11340 0 VWDISGLR TEDLVVSASLDQTVRVWDISGLRKKNLSPG SLDQTVRVWDISGLRKKNLSPGAVESDVRG R V W L R K 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 1 0 1 0 0 8 0 944.50797 P53621 P53621 161 168 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0076078 113.41 By MS/MS 2 0.816 1 1 1 3 938640 938640 0 15464 1034 16334 39523;39524;39525 31616;31617;31618 31616 3 96974 0 VWDLFPEADK KTCHSFIINEKMNGKVWDLFPEADKVRTML KMNGKVWDLFPEADKVRTMLVRKIQEESLR K V W D K V 1 0 0 2 0 0 1 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 10 0 1218.5921 Q99613;B5ME19 Q99613 765 774 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.010395 91.265 By MS/MS 6 1.41 1 1 1 1 1 5 2906800 2906800 0 15465 2252 16335 39526;39527;39528;39529;39530 31619;31620;31621;31622 31622 4 201930 0 VWELGGCANK TKSDAPKEKGKKAPRVWELGGCANKEVLDY KKAPRVWELGGCANKEVLDYSTPTTNGTPE R V W N K E 1 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1132.5335 P08240 P08240 247 256 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.052298 84.615 By MS/MS 5 0 1 1 702230 702230 0 15466 522 16336 39531 31623 31623 1 7043 0 VWLDPNETNEIANANSR QKRLASSVLRCGKKKVWLDPNETNEIANAN LDPNETNEIANANSRQQIRKLIKDGLIIRK K V W S R Q 2 1 4 1 0 0 2 0 0 1 1 0 0 0 1 1 1 1 0 1 0 0 17 0 1941.9181 P84098 P84098 22 38 RPL19 60S ribosomal protein L19 yes yes 2 2.5327E-08 225.21 By MS/MS 8 0 1 1 4484500 4484500 0 15467 1247 16337 39532 31624 31624 1 56616 0 VWNLANCK SNPIIVSCGWDKLVKVWNLANCKLKTNHIG GWDKLVKVWNLANCKLKTNHIGHTGYLNTV K V W C K L 1 0 2 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 8 0 1003.4909 P63244 P63244 176 183 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.0067988 117.16 By MS/MS 8.5 0.5 1 1 2 13481000 13481000 0 15468 1202 16338 39533;39534 31625 31625 1 171820 0 VWQVTIGTR DGQTLFAGYTDNLVRVWQVTIGTR______ TDNLVRVWQVTIGTR_______________ R V W T R - 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 2 1 0 2 0 0 9 0 1058.5873 P63244 P63244 309 317 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 3.242E-07 195.57 By MS/MS 9 1 1 1 2 7589000 7589000 0 15469 1202 16339 39535;39536 31626;31627 31626 2 105710 0 VYAEVNSLR ______________________________ AGSRARVYAEVNSLRSREYWDYEAHVPSWG R V Y L R S 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 9 0 1049.5506 P19784 P19784 12 20 CSNK2A2 Casein kinase II subunit alpha yes yes 2 0.019778 89.029 By MS/MS 7 0 1 1 1718400 1718400 0 15470 665 16340 39537 31628 31628 1 26976 0 VYATILNAGTNTDGFK GVVAVLLTKKSLARRVYATILNAGTNTDGF YATILNAGTNTDGFKEQGVTFPSGDIQEQL R V Y F K E 2 0 2 1 0 0 0 2 0 1 1 1 0 1 0 0 3 0 1 1 0 0 16 0 1683.8468 P49327 P49327 242 257 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.5727E-11 265.53 By MS/MS 3 1 1 1 2 2002500 2002500 0 15471 946 16341 39538;39539 31629;31630 31629 2 392850 0 VYCHYFVK RIRYHGRGRFGIMEKVYCHYFVKLVEGPPP RFGIMEKVYCHYFVKLVEGPPPPPEPPKTA K V Y V K L 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 2 2 0 0 8 0 1114.527 Q9NWU5 Q9NWU5 164 171 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.02545 93.593 By MS/MS 9 0 1 1 849150 849150 0 15472 2614 16342 39540 31631 31631 1 16711 0 VYDQMPEPR VAGTLTNKMAPALRKVYDQMPEPRYVVSMG APALRKVYDQMPEPRYVVSMGSCANGGGYY K V Y P R Y 0 1 0 1 0 1 1 0 0 0 0 0 1 0 2 0 0 0 1 1 0 0 9 0 1133.5175 O75251 O75251 137 145 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 0.0018717 122.94 By MS/MS 9 0 2 2 1012100 1012100 0 15473 307 16343;16344 39541;39542 31632;31633 31633 130 2 19918 0 VYDQTNPYTDVR ETLEYECFGGEYRPKVYDQTNPYTDVRRRY RPKVYDQTNPYTDVRRRYWNAYMLFYQRVS K V Y V R R 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 2 0 2 2 0 0 12 0 1469.6787 Q9UPU5 Q9UPU5 2017 2028 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 2.7267E-05 174.57 By MS/MS 2.5 1.12 1 1 1 1 4 1209500 1209500 0 15474 2802 16345 39543;39544;39545;39546 31634 31634 1 256280 0 VYEAVELLK DQYVKAASHLLSIHKVYEAVELLKSNHFYR LLSIHKVYEAVELLKSNHFYREAIAIAKAR K V Y L K S 1 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 2 0 0 9 0 1062.5961 Q8TEQ6 Q8TEQ6 991 999 GEMIN5 Gem-associated protein 5 yes yes 2 0.00078032 138.1 By MS/MS 3.5 1.12 1 1 1 1 4 1747000 1747000 0 15475 2002 16346 39547;39548;39549;39550 31635 31635 1 92216 0 VYEEVLSVTPNDGFAK GVGYLLIGDNDNAKKVYEEVLSVTPNDGFA YEEVLSVTPNDGFAKVHYGFILKAQNKIAE K V Y A K V 1 0 1 1 0 0 2 1 0 0 1 1 0 1 1 1 1 0 1 3 0 0 16 0 1766.8727 Q12797 Q12797 476 491 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.00021492 176.87 By MS/MS 4 0 1 1 744790 744790 0 15476 1329 16347 39551 31636 31636 1 70090 0 VYEFLDKLDVVR ALDLVAAKCYYYHARVYEFLDKLDVVRSFL HARVYEFLDKLDVVRSFLHARLRTATLRHD R V Y V R S 0 1 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 1 3 0 0 12 1 1494.8082 O43242 O43242 217 228 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 2.8053E-05 161.19 By MS/MS 6 0 1 1 3823200 3823200 0 15477 198 16348 39552 31637 31637 1 26282 0 VYEGERPLTK IFSTASDNQPTVTIKVYEGERPLTKDNHLL TVTIKVYEGERPLTKDNHLLGTFDLTGIPP K V Y T K D 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 0 1 0 1 1 0 0 10 1 1190.6295 P11021 P11021 465 474 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0065976 104.42 By MS/MS By matching 6.57 2.44 1 2 1 1 2 4 3 10278000 10098000 180390 15478 571 16349 39553;39554;39555;39556;39557;39558;39559 31638;31639 31638 2 107960 132560 VYEIPGLEPITFAGK GVRSTRKSEPPPLDRVYEIPGLEPITFAGK VYEIPGLEPITFAGKMHFVPWLARPIFPPW R V Y G K M 1 0 0 0 0 0 2 2 0 2 1 1 0 1 2 0 1 0 1 1 0 0 15 0 1632.8763 Q9BZE1 Q9BZE1 49 63 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 0.005373 102.4 By MS/MS 7 0 1 1 469510 469510 0 15479 2376 16350 39560 31640;31641 31641 2 7370.4 0 VYEIQDIYENSWTK ELQASRVSSDVIDQKVYEIQDIYENSWTKL KVYEIQDIYENSWTKLTERFFKNTPWPEAE K V Y T K L 0 0 1 1 0 1 2 0 0 2 0 1 0 0 0 1 1 1 2 1 0 0 14 0 1786.8414 Q9Y262 Q9Y262 88 101 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 4.704E-17 265.75 By MS/MS 6 0.816 1 1 1 3 9193900 9193900 0 15480 2814 16351 39561;39562;39563 31642;31643 31642 2 72046 0 VYELQASR IQYFHKTVSDLIDQKVYELQASRVSSDVID SDLIDQKVYELQASRVSSDVIDQKVYEIQD K V Y S R V 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 964.49779 Q9Y262 Q9Y262 71 78 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0015645 154.12 By MS/MS By MS/MS 5.38 2.6 1 1 2 1 1 1 1 7 1 53615000 53278000 336860 15481 2814 16352 39564;39565;39566;39567;39568;39569;39570;39571 31644;31645;31646;31647;31648;31649;31650;31651 31644 8 756730 282890 VYGTVLSR PHELKEVSQTGDLRKVYGTVLSRHHHLVRK QTGDLRKVYGTVLSRHHHLVRKTDAVYDPA K V Y S R H 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 8 0 893.49707 Q9UDR5 Q9UDR5 260 267 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.0076078 113.41 By MS/MS 4 0 1 1 638940 638940 0 15482 2710 16353 39572 31652 31652 1 60128 0 VYIEDSLGER AAYEEDENWPEIFVKVYIEDSLGERIWVDS EIFVKVYIEDSLGERIWVDSPHCKTFVDNI K V Y E R I 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1179.5772 Q8N201 Q8N201 229 238 INTS1 Integrator complex subunit 1 yes yes 2 0.02414 84.817 By MS/MS By matching 2.33 1.25 1 1 1 2 1 1318700 1268200 50558 15483 1907 16354 39573;39574;39575 31653 31653 1 211980 50558 VYIPCIYVLNK DATADDLIDVVEGNRVYIPCIYVLNKIDQI EGNRVYIPCIYVLNKIDQISIEELDIIYKV R V Y N K I 0 0 1 0 1 0 0 0 0 2 1 1 0 0 1 0 0 0 2 2 0 0 11 0 1380.7475 Q9Y295 Q9Y295 239 249 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 0.038951 75.738 By MS/MS 7 0 1 1 91176 91176 0 15484 2822 16355 39576 31654 31654 1 1431.3 0 VYISNGQVLDSR ______________________________ ______________________________ M V Y S R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 0 2 0 0 1 2 0 0 12 0 1349.6939 Q9Y6D0 Q9Y6D0 2 13 SELK Selenoprotein K yes yes 2 1.7705E-05 177.57 By MS/MS 10 0 1 1 1231200 1231200 0 15485 2939 16356 39577 31655 31655 1 66356 0 VYLACRDVEKGELVAK IGKETAKELAQRGARVYLACRDVEKGELVA YLACRDVEKGELVAKEIQTTTGNQQVLVRK R V Y A K E 2 1 0 1 1 0 2 1 0 0 2 2 0 0 0 0 0 0 1 3 0 0 16 2 1848.9768 Q8TC12 Q8TC12 68 83 RDH11 Retinol dehydrogenase 11 yes yes 3 0.028407 107.35 By MS/MS 8 0 1 1 4472000 4472000 0 15486 1988 16357 39578 31656 31656 1 56458 0 VYLGDIPLK LIDWNNPAIINKMYKVYLGDIPLKTKEGAV INKMYKVYLGDIPLKTKEGAVLKPELKRDP K V Y L K T 0 0 0 1 0 0 0 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 9 0 1016.5906 Q5VYK3 Q5VYK3 305 313 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0088222 102.51 By MS/MS 2.5 0.5 1 1 2 1718200 1718200 0 15487 1656 16358 39579;39580 31657 31657 1 517480 0 VYLQNEYK LGAVYDVSHYNALLKVYLQNEYKFSPTDFL HYNALLKVYLQNEYKFSPTDFLAKMEEANI K V Y Y K F 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 8 0 1055.5288 P42704 P42704 171 178 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0038052 131.03 By MS/MS By matching 3.75 0.829 2 1 1 3 1 11664000 11491000 172830 15488 886 16359 39581;39582;39583;39584 31658 31658 1 295350 21998 VYNALVAFIR ELSPGSCFFLPRGTRVYNALVAFIRAEYAH PRGTRVYNALVAFIRAEYAHRGFSEVKTPT R V Y I R A 2 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 10 0 1164.6655 Q9BW92 Q9BW92 331 340 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 1.8265E-06 206.09 By MS/MS 5.5 0.5 1 1 2 625410 625410 0 15489 2346 16360 39585;39586 31659;31660 31659 2 5966.9 0 VYNEVPTFQLEVPK SDHAKELIVGEIFVRVYNEVPTFQLEVPKA RVYNEVPTFQLEVPKAFAASLLDYIGSQAQ R V Y P K A 0 0 1 0 0 1 2 0 0 0 1 1 0 1 2 0 1 0 1 3 0 0 14 0 1661.8665 O75165 O75165 1695 1708 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00044212 164.9 By MS/MS 2 0 1 1 124470 124470 0 15490 302 16361 39587 31661;31662 31662 2 42102 0 VYNVTQHAVGIVVNK QKGMPHKCYHGKTGRVYNVTQHAVGIVVNK VYNVTQHAVGIVVNKQVKGKILAKRINVRI R V Y N K Q 1 0 2 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 1 5 0 0 15 0 1639.9046 P46778 P46778 64 78 RPL21 60S ribosomal protein L21 yes yes 2;3 6.2623E-07 183.06 By MS/MS 9 0 2 2 4752900 4752900 0 15491 916 16362 39588;39589 31663;31664 31664 2 93537 0 VYNYNHLMPTR KKKIAKRSKIKSFVKVYNYNHLMPTRYSVD SFVKVYNYNHLMPTRYSVDIPLDKTVVNKD K V Y T R Y 0 1 2 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 2 1 0 0 11 0 1406.6765 P61353 P61353 74 84 RPL27 60S ribosomal protein L27 yes yes 2;3 0.0018384 112.11 By MS/MS By matching 9.4 0.49 3 2 4 1 3194100 3167400 26623 15492 1122 16363 39590;39591;39592;39593;39594 31665;31666 31666 638 2 112490 60708 VYQETSEMR STVISYSNTGDGAPKVYQETSEMRSAPGGI GDGAPKVYQETSEMRSAPGGIRETRRTVRD K V Y M R S 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 1141.5074 Q15773 Q15773 120 128 MLF2 Myeloid leukemia factor 2 yes yes 2 0.020111 111.06 By MS/MS 8 0 1 1 280160 280160 0 15493 1531 16364 39595 31667 31667 0 3537 0 VYQGLYCVAIR LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQ NRLKVYQGLYCVAIRDFKQAAELFLDTVST K V Y I R D 1 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 2 0 0 11 0 1340.6911 Q15008 Q15008 182 192 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00025782 138.06 By MS/MS 7 0 1 1 612420 612420 0 15494 1471 16365 39596 31668 31668 1 9613.8 0 VYQVTEQQISEK FAIFLWRTVLVVKDRVYQVTEQQISEKLKT KDRVYQVTEQQISEKLKTIMKENTELVQKL R V Y E K L 0 0 0 0 0 3 2 0 0 1 0 1 0 0 0 1 1 0 1 2 0 0 12 0 1450.7304 Q5JRA6 Q5JRA6 1208 1219 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 0.00040977 136.81 By MS/MS By matching 2.75 1.09 1 2 1 3 1 1590000 1167000 422960 15495 1606 16366 39597;39598;39599;39600 31669;31670;31671 31669 3 156480 53837 VYQWDDPDPR AFEVSENGNLVVSGKVYQWDDPDPRLFDHP VVSGKVYQWDDPDPRLFDHPESPTPNPTEP K V Y P R L 0 1 0 3 0 1 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 10 0 1289.5677 P49327 P49327 958 967 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00075537 128.35 By MS/MS 2.5 1.12 1 1 1 1 4 11713000 11713000 0 15496 946 16367 39601;39602;39603;39604 31672;31673 31672 2 2747800 0 VYRIEGDETSTEAATR RPSRADQFEYVMYGKVYRIEGDETSTEAAT YRIEGDETSTEAATRLSAYVSYGGLLMRLQ K V Y T R L 2 2 0 1 0 0 3 1 0 1 0 0 0 0 0 1 3 0 1 1 0 0 16 1 1796.8541 P52434 P52434 96 111 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2;3 3.4441E-10 249.19 By MS/MS 10 0 2 2 2406000 2406000 0 15497 1016 16368 39605;39606 31674;31675 31675 2 129670 0 VYSLFLDESR RKRKGTEVQVDDIKRVYSLFLDESRSTQYM DDIKRVYSLFLDESRSTQYMKEYQDAFLFN R V Y S R S 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 2 0 0 1 1 0 0 10 0 1227.6136 Q9Y230 Q9Y230 429 438 RUVBL2 RuvB-like 2 yes yes 2 3.0215E-10 203.35 By MS/MS By MS/MS 7.43 1.5 3 1 1 1 1 6 1 32044000 31958000 85674 15498 2810 16369 39607;39608;39609;39610;39611;39612;39613 31676;31677;31678;31679;31680;31681;31682 31677 6 240420 87791 VYSSHTGYPGGFR NTRHIAFSGNKWEQKVYSSHTGYPGGFRQV QKVYSSHTGYPGGFRQVTAAQLHLRDPVAI K V Y F R Q 0 1 0 0 0 0 0 3 1 0 0 0 0 1 1 2 1 0 2 1 0 0 13 0 1426.663 Q9BYD1 Q9BYD1 76 88 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 1.1971E-05 194.94 By MS/MS 9 0 1 1 594640 594640 0 15499 2368 16370 39614 31683 31683 1 11703 0 VYTENVDKR KVDVGQQPLRINGVKVYTENVDKRQIILDL RINGVKVYTENVDKRQIILDLQISFVGNCE K V Y K R Q 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 2 0 0 9 1 1122.5669 A0FGR8 A0FGR8 254 262 ESYT2 Extended synaptotagmin-2 yes yes 2 0.035922 91.265 By MS/MS 4 0 1 1 559770 559770 0 15500 6 16371 39615 31684 31684 1 52678 0 VYTISDTIAR MFPYPSGKLHMGHVRVYTISDTIARFQKMR MGHVRVYTISDTIARFQKMRGMQVINPMGW R V Y A R F 1 1 0 1 0 0 0 0 0 2 0 0 0 0 0 1 2 0 1 1 0 0 10 0 1137.603 Q15031 Q15031 104 113 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.00023479 159.28 By MS/MS 6.5 2.06 1 1 1 1 4 5218400 5218400 0 15501 1477 16372 39616;39617;39618;39619 31685;31686 31685 2 407980 0 VYTLSVSGDR PRTPCNAGTFSQPEKVYTLSVSGDRLIVGT SQPEKVYTLSVSGDRLIVGTAGRRVLVWDL K V Y D R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 1 0 1 2 0 0 10 0 1095.556 O43684 O43684 140 149 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.00055002 136.57 By MS/MS 7.5 0.5 1 1 2 2495200 2495200 0 15502 228 16373 39620;39621 31687 31687 1 37308 0 VYTPSNADIGLR SSPSSSWTETDVEERVYTPSNADIGLRLKL EERVYTPSNADIGLRLKLHCTPGDGQRFGH R V Y L R L 1 1 1 1 0 0 0 1 0 1 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1304.6725 Q6L8Q7 Q6L8Q7 234 245 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.00024388 147.62 By MS/MS By matching 5.75 0.829 2 1 1 3 1 9617000 9580300 36705 15503 1686 16374 39622;39623;39624;39625 31688 31688 1 92338 30825 VYTQVEFKR PNYQPPEGRYNDITKVYTQVEFKR______ YNDITKVYTQVEFKR_______________ K V Y K R - 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 1 2 0 0 9 1 1168.6241 Q9NQ50 Q9NQ50 198 206 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2;3 1.0264E-10 209.19 By MS/MS 9 0 2 2 1656300 1656300 0 15504 2536 16375 39626;39627 31689;31690 31689 2 32596 0 VYTSMSDCLIK DLAKTRLQNQQNGQRVYTSMSDCLIKTVRS NGQRVYTSMSDCLIKTVRSEGYFGMYRGAA R V Y I K T 0 0 0 1 1 0 0 0 0 1 1 1 1 0 0 2 1 0 1 1 0 0 11 0 1315.6152 Q9H936 Q9H936 45 55 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 0.00011752 150.35 By MS/MS 8 0 1 1 1224700 1224700 0 15505 2480 16376 39628 31691 31691 1 15462 0 VYVIGSFVDK TADSPNVMTTFRHDKVYVIGSFVDKSMQPG FRHDKVYVIGSFVDKSMQPGTSLAKAKRLN K V Y D K S 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 1 3 0 0 10 0 1125.607 Q7L0Y3 Q7L0Y3 306 315 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0046868 107.15 By MS/MS 8 0.816 1 1 1 3 4786900 4786900 0 15506 1759 16377 39629;39630;39631 31692;31693 31692 2 74069 0 WALSQSNPSALR AEVMNSLAVTMDDFRWALSQSNPSALRETV DFRWALSQSNPSALRETVVEVPQVTWEDIG R W A L R E 2 1 1 0 0 1 0 0 0 0 2 0 0 0 1 3 0 1 0 0 0 0 12 0 1328.6837 P55072 P55072 454 465 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00011719 178.54 By MS/MS 4.5 0.5 1 1 2 3586800 3586800 0 15507 1054 16378 39632;39633 31694 31694 1 250300 0 WDNFLAFER GLATAQTLKHPQTAKWDNFLAFERLLLQSI HPQTAKWDNFLAFERLLLQSIGESAMSVVL K W D E R L 1 1 1 1 0 0 1 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 9 0 1196.5615 Q8WU76 Q8WU76 425 433 SCFD2 Sec1 family domain-containing protein 2 yes yes 2 0.0023375 117.02 By MS/MS 5 0 1 1 176430 176430 0 15508 2011 16379 39634 31695 31695 1 1769.5 0 WDPTANEDPEWILVEK GDGFVSLEEFLGDYRWDPTANEDPEWILVE DPTANEDPEWILVEKDRFVNDYDKDNDGRL R W D E K D 1 0 1 2 0 0 3 0 0 1 1 1 0 0 2 0 1 2 0 1 0 0 16 0 1940.9156 Q14257 Q14257 217 232 RCN2 Reticulocalbin-2 yes yes 2 0.00042422 166.86 By MS/MS 6 0 1 1 1524500 1524500 0 15509 1436 16380 39635 31696 31696 1 10480 0 WDPTANEDPEWILVEKDR GDGFVSLEEFLGDYRWDPTANEDPEWILVE TANEDPEWILVEKDRFVNDYDKDNDGRLDP R W D D R F 1 1 1 3 0 0 3 0 0 1 1 1 0 0 2 0 1 2 0 1 0 0 18 1 2212.0437 Q14257 Q14257 217 234 RCN2 Reticulocalbin-2 yes yes 3 0.01189 79.346 By MS/MS 6 0 1 1 5436200 5436200 0 15510 1436 16381 39636 31697 31697 1 37370 0 WDQSTFLGR ______________________________ NIQEPRWDQSTFLGRARHFFTVTDPRNLLL R W D G R A 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 1 0 0 0 0 9 0 1108.5302 Q9BWM7 Q9BWM7 15 23 SFXN3 Sideroflexin-3 yes yes 2 0.0064478 106.68 By MS/MS 8 0 1 1 1843600 1843600 0 15511 2352 16382 39637 31698 31698 1 23275 0 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1474.7416 CON__P04264;P04264 P04264 212 223 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.3242E-15 229 By MS/MS By MS/MS 3.38 1.65 2 2 2 1 1 6 2 26925000 22703000 4221600 + 15512 471;45 16383 39638;39639;39640;39641;39642;39643;39644;39645 31699;31700;31701;31702;31703;31704;31705 31700 7 1447200 735670 WFVLDAETR HPSGTVVAIGTHSGRWFVLDAETRDLVSIH GTHSGRWFVLDAETRDLVSIHTDGNEQLSV R W F T R D 1 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 9 0 1135.5662 Q9HC35 Q9HC35 657 665 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.051694 75.213 By MS/MS 8 0 1 1 562180 562180 0 15513 2510 16384 39646 31706 31706 1 7097.5 0 WHVVASMSTR AIHGDCEAYDTRTDRWHVVASMSTRRARVG TRTDRWHVVASMSTRRARVGVAAVGNRLYA R W H T R R 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 2 1 1 0 2 0 0 10 0 1172.5761 Q6TDP4 Q6TDP4 369 378 KLHL17 Kelch-like protein 17 yes yes 2 0.03337 87.754 By MS/MS 4.4 2.15 1 1 1 1 1 5 1192300 0 1192300 15514 1727 16385 39647;39648;39649;39650;39651 31707 31707 918 1 0 737710 WIVNLIR MLADKLNMTPEEAERWIVNLIRNARLDAKI MTPEEAERWIVNLIRNARLDAKIDSKLGHV R W I I R N 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 1 0 0 7 0 912.55452 P60228 P60228 370 376 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.009438 137.44 By MS/MS 7 0.816 1 1 1 3 4865100 4865100 0 15515 1090 16386 39652;39653;39654 31708;31709 31708 2 37187 0 WMEVVVITHKGGQR FNDKFCDQMMQHLRKWMEVVVITHKGGQRS KWMEVVVITHKGGQRSDGNESISECGRCPL K W M Q R S 0 1 0 0 0 1 1 2 1 1 0 1 1 0 0 0 1 1 0 3 0 0 14 1 1638.8664 Q9Y4A5 Q9Y4A5 1474 1487 TRRAP Transformation/transcription domain-associated protein yes yes 3 0.036377 68.809 By MS/MS 6.5 0.5 1 1 2 5372400 5372400 0 15516 2890 16387 39655;39656 31710 31710 1205 1 39051 0 WPDLLTEMVNR SDAISIIGREDFPQKWPDLLTEMVNRFQSG FPQKWPDLLTEMVNRFQSGDFHVINGVLRT K W P N R F 0 1 1 1 0 0 1 0 0 0 2 0 1 0 1 0 1 1 0 1 0 0 11 0 1372.6809 P55060 P55060 127 137 CSE1L Exportin-2 yes yes 3 0.027686 76.143 By MS/MS 7.5 0.5 1 1 2 6980800 6980800 0 15517 1053 16388 39657;39658 31711 31711 586 1 107320 0 WSEALVLYDR YRCFFIAQSYVLVKKWSEALVLYDRVLKYA VLVKKWSEALVLYDRVLKYANEVNSDAGAF K W S D R V 1 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 1 1 1 0 0 10 0 1250.6295 Q9UHB9 Q9UHB9 479 488 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0013375 133.23 By MS/MS 5 0 1 1 410500 410500 0 15518 2728 16389 39659 31712 31712 1 4117.1 0 WSSLACNIALDAVK LNIINSSITTKAISRWSSLACNIALDAVKM RWSSLACNIALDAVKMVQFEENGRKEIDIK R W S V K M 3 0 1 1 1 0 0 0 0 1 2 1 0 0 0 2 0 1 0 1 0 0 14 0 1546.7814 P49368 P49368 168 181 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.00045604 148.68 By MS/MS 6 0 1 1 12801000 12801000 0 15519 947 16390 39660 31713 31713 1 87996 0 WTDENIDTVALK LRLFQDRLVEDEERRWTDENIDTVALKHFP ERRWTDENIDTVALKHFPNIDREKAMSRPI R W T L K H 1 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 2 1 0 1 0 0 12 0 1403.6933 Q14204 Q14204 2845 2856 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0013104 119.39 By MS/MS 1 0 1 1 171140 171140 0 15520 1433 16391 39661 31714 31714 1 41240 0 WTLLQEQGTK KVRFLEQQNKVLDTKWTLLQEQGTKTVRQN VLDTKWTLLQEQGTKTVRQNLEPLFEQYIN K W T T K T 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1202.6295 CON__P13647;P13647;CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P13647 200 209 KRT5;KRT6A;KRT6C Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 9.775E-12 210.64 By MS/MS By MS/MS 3.29 1.75 2 2 1 1 1 5 2 8513100 5776000 2737100 + 15521 52;44;56;40 16392 39662;39663;39664;39665;39666;39667;39668 31715;31716;31717;31718;31719;31720 31716 6 360020 514570 WVFKEEGVLR YSQTGNYELAVALSRWVFKEEGVLRVGPVS VALSRWVFKEEGVLRVGPVSHHRVGETAPP R W V L R V 0 1 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 1 0 2 0 0 10 1 1261.6819 P39656 P39656 298 307 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 3 0.002545 107.79 By MS/MS 6 0 1 1 2175800 2175800 0 15522 855 16393 39669 31721 31721 1 14957 0 WVGGPEIELIAIATGGR EANHLLLQNNLPAVRWVGGPEIELIAIATG GGPEIELIAIATGGRIVPRFSELTAEKLGF R W V G R I 2 1 0 0 0 0 2 4 0 3 1 0 0 0 1 0 1 1 0 1 0 0 17 0 1737.9414 P48643 P48643 324 340 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00027616 166.62 By MS/MS 6 0 1 1 124160 124160 0 15523 940 16394 39670 31722;31723 31722 2 853.47 0 YAADINSR TVCQFITATEMTLQRYAADINSRLIRQVER TEMTLQRYAADINSRLIRQVERLKQEAVTV R Y A S R L 2 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 8 0 908.43519 Q96Q15 Q96Q15 2713 2720 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.050133 82.426 By MS/MS 1.5 0.5 1 1 2 376420 376420 0 15524 2213 16395 39671;39672 31724 31724 1 108880 0 YAALSVDGEDENEGEDYAE KPEENPASKFSSASKYAALSVDGEDENEGE SVDGEDENEGEDYAE_______________ K Y A A E - 3 0 1 3 0 0 5 2 0 0 1 0 0 0 0 1 0 0 2 1 0 0 19 0 2074.8127 P23588 P23588 593 611 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 6.5612E-45 324.41 By MS/MS By MS/MS 5 0 2 1 1 5766500 5591200 175270 15525 708 16396 39673;39674 31725;31726;31727 31726 3 56077 147190 YAALYQPLFDK IEAKFYEEVHDLERKYAALYQPLFDKRREF LERKYAALYQPLFDKRREFITGDVEPTDAE K Y A D K R 2 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 0 0 0 11 0 1327.6812 Q99733 Q99733 95 105 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 2 5.9637E-05 155.42 By MS/MS 6 0 1 1 826060 826060 0 15526 2264 16397 39675 31728 31728 1 5678.5 0 YADLLLEKETLK DVQRQQEREKELQHRYADLLLEKETLKSKF QHRYADLLLEKETLKSKF____________ R Y A L K S 1 0 0 1 0 0 2 0 0 0 4 2 0 0 0 0 1 0 1 0 0 0 12 1 1434.797 Q99459 Q99459 788 799 CDC5L Cell division cycle 5-like protein yes yes 2;3 7.8294E-05 178.67 By MS/MS 4.33 0.471 2 1 3 2834300 2834300 0 15527 2245 16398 39676;39677;39678 31729;31730 31730 2 250830 0 YADLPGIAR ______________________________ ______________________________ K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 Q13561 Q13561 6 14 DCTN2 Dynactin subunit 2 yes yes 2 0.0082245 103.56 By MS/MS By MS/MS 7 1.41 2 1 2 1 9082800 8987500 95278 15528 1397 16399 39679;39680;39681 31731;31732;31733 31732 3 66963 97633 YADLSHNR ELNAAQTSVAYGCIKYADLSHNRLNDYIFS VAYGCIKYADLSHNRLNDYIFSFDKMLDDR K Y A N R L 1 1 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 8 0 974.45699 P54136 P54136 505 512 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.036301 87.696 By MS/MS 5 0 1 1 2683200 2683200 0 15529 1043 16400 39682 31734 31734 1 26912 0 YADVIIPR FVKPAFEEFCLPTKKYADVIIPRGADNLVA FCLPTKKYADVIIPRGADNLVAINLIVQHI K Y A P R G 1 1 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 8 0 945.52837 Q9BZX2;Q9HA47 Q9BZX2 203 210 UCK2;UCK1 Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 yes no 2 0.018199 109.86 By MS/MS 8 0 1 1 2174600 2174600 0 15530 2385 16401 39683 31735 31735 1 27454 0 YADVIVHR LASPIYTHFTSPIRRYADVIVHRLLAVAIG FTSPIRRYADVIVHRLLAVAIGADCTYPEL R Y A H R L 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 2 0 0 8 0 971.51886 Q9Y2L1 Q9Y2L1 782 789 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.012059 108.46 By MS/MS 4 0 1 1 1526600 1526600 0 15531 2834 16402 39684 31736 31736 1 143670 0 YAEAVQLLGR GEFTALVYRLIRDARYAEAVQLLGRELQRS IRDARYAEAVQLLGRELQRSPRSRAGLSLL R Y A G R E 2 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 1 1 0 0 10 0 1118.6084 Q86WT1 Q86WT1 27 36 TTC30A Tetratricopeptide repeat protein 30A yes yes 2 0.0038452 125.71 By MS/MS 5 0 1 1 736680 736680 0 15532 1840 16403 39685 31737 31737 0 7388.5 0 YAEEDRR LSKDDIENMVKNAEKYAEEDRRKKERVEAV NMVKNAEKYAEEDRRKKERVEAVNMAEGII K Y A R R K 1 2 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 1 937.42536 P38646 P38646 568 574 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.031962 137.83 By MS/MS 5 0 1 1 602160 602160 0 15533 850 16404 39686 31738 31738 1 6039.3 0 YAEERDRAEAEAR KFDQLLAEEKTISAKYAEERDRAEAEAREK AKYAEERDRAEAEAREKETKALSLARALEE K Y A A R E 4 3 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 13 2 1564.723 P35580;P35579 P35579 1460 1472 MYH10;MYH9 Myosin-10;Myosin-9 no no 2;3 0.00016862 158.05 By MS/MS 3.67 1.49 2 1 1 1 1 6 7544300 7544300 0 15534 824;825 16405 39687;39688;39689;39690;39691;39692 31739;31740;31741;31742 31740 3 1359700 0 YAEKLIQEGK DQFTYTSDHFETIMKYAEKLIQEGKAYVDD ETIMKYAEKLIQEGKAYVDDTPAEQMKAER K Y A G K A 1 0 0 0 0 1 2 1 0 1 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1177.6343 P07814 P07814 279 288 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 8.2113E-05 166.66 By MS/MS 3 0 1 1 0 0 0 15535 512 16406 39693 31743 31743 1 0 0 YAELLLIPK LGAMKSLSALLGCSKYAELLLIPKVLAENG LLGCSKYAELLLIPKVLAENGHNSDCASSP K Y A P K V 1 0 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 9 0 1058.6376 Q15751 Q15751 2528 2536 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 0.0080709 103.83 By MS/MS 1.5 0.5 1 1 2 134290 134290 0 15536 1529 16407 39694;39695 31744 31744 1 37414 0 YAHQSGFHVDR YGHILAGTIKDIVTRYAHQSGFHVDRRFGW IVTRYAHQSGFHVDRRFGWDCHGLPVEYEI R Y A D R R 1 1 0 1 0 1 0 1 2 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1315.6058 P41252 P41252 71 81 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.0076904 93.345 By MS/MS 3 0 1 1 1732200 1732200 0 15537 871 16408 39696 31745 31745 1 31695 0 YAHQSGFHVDRR YGHILAGTIKDIVTRYAHQSGFHVDRRFGW VTRYAHQSGFHVDRRFGWDCHGLPVEYEID R Y A R R F 1 2 0 1 0 1 0 1 2 0 0 0 0 1 0 1 0 0 1 1 0 0 12 1 1471.7069 P41252 P41252 71 82 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3;4 0.0055538 94.465 By MS/MS 3 0 2 2 1093900 1093900 0 15538 871 16409 39697;39698 31746;31747 31746 1 20015 0 YAHVVLR KIAFAITAIKGVGRRYAHVVLRKADIDLTK AIKGVGRRYAHVVLRKADIDLTKRAGELTE R Y A L R K 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 7 0 856.49192 P62269 P62269 40 46 RPS18 40S ribosomal protein S18 yes yes 2 0.017982 114.67 By MS/MS By matching 9.33 0.471 2 1 2 1 21926000 21800000 125730 15539 1149 16410 39699;39700;39701 31748;31749;31750 31750 3 592310 286700 YAHVVLRK KIAFAITAIKGVGRRYAHVVLRKADIDLTK IKGVGRRYAHVVLRKADIDLTKRAGELTED R Y A R K A 1 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 2 0 0 8 1 984.58688 P62269 P62269 40 47 RPS18 40S ribosomal protein S18 yes yes 2;3 0.011442 128.48 By MS/MS 9.5 0.5 2 2 4 15815000 15815000 0 15540 1149 16411 39702;39703;39704;39705 31751;31752;31753 31752 3 390320 0 YAIGSLNEGR VPEANILGQIGHGYKYAIGSLNEGRIGIAA GHGYKYAIGSLNEGRIGIAAQMLGLAQGCF K Y A G R I 1 1 1 0 0 0 1 2 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1078.5407 P45954 P45954 285 294 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.019831 86.898 By MS/MS 7 0 1 1 1862200 1862200 0 15541 904 16412 39706 31754 31754 1 29234 0 YAILNEPFKGEMNR NHGYARWQDIQNDPRYAILNEPFKGEMNRG RYAILNEPFKGEMNRGNFLEIKNKFLARRF R Y A N R G 1 1 2 0 0 0 2 1 0 1 1 1 1 1 1 0 0 0 1 0 0 0 14 1 1680.8294 Q14839 Q14839 1758 1771 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 3 0.048053 65.563 By MS/MS 2 0 1 1 458420 458420 0 15542 1459 16413 39707 31755 31755 857 1 155060 0 YALTGDEVK RECLPLIIFLRNRLKYALTGDEVKKICMQR LRNRLKYALTGDEVKKICMQRFIKIDGKVR K Y A V K K 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 994.49713 P62701;Q8TD47;P22090 P62701 54 62 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.030245 84.498 By MS/MS By matching 8.33 0.471 2 1 2 1 10559000 10469000 90290 15543 1165 16414 39708;39709;39710 31756 31756 1 136340 121840 YALTGDEVKK RECLPLIIFLRNRLKYALTGDEVKKICMQR RNRLKYALTGDEVKKICMQRFIKIDGKVRT K Y A K K I 1 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 1 0 0 10 1 1122.5921 P62701;Q8TD47;P22090 P62701 54 63 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.0022953 112.11 By MS/MS By matching 8.86 0.833 3 2 2 6 1 18065000 18034000 30469 15544 1165 16415 39711;39712;39713;39714;39715;39716;39717 31757;31758;31759 31758 3 242190 41117 YALYDATYETK PYATFVKMLPDKDCRYALYDATYETKESKK KDCRYALYDATYETKESKKEDLVFIFWAPE R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 P23528;Q9Y281 P23528 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 4.7173E-09 205.83 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 7640800 7566500 74345 15545 707 16416 39718;39719;39720 31760;31761;31762;31763 31763 4 228560 169530 YANEVNSDAGAFK KKWSEALVLYDRVLKYANEVNSDAGAFKNS LKYANEVNSDAGAFKNSLKDLPDVQELITQ K Y A F K N 3 0 2 1 0 0 1 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 13 0 1384.6259 Q9UHB9 Q9UHB9 492 504 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00028829 153.54 By MS/MS By matching 5.33 0.471 2 1 2 1 9952700 9922900 29800 15546 2728 16417 39721;39722;39723 31764 31764 1 98052 25026 YAQAGFEGFK FGSEEQLLPVEKLPKYAQAGFEGFKTLNRI EKLPKYAQAGFEGFKTLNRIQSKLYRAALE K Y A F K T 2 0 0 0 0 1 1 2 0 0 0 1 0 2 0 0 0 0 1 0 0 0 10 0 1116.524 O75643 O75643 470 479 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0014766 114.4 By MS/MS 1.5 0.5 1 1 2 1390200 1390200 0 15547 340 16418 39724;39725 31765 31765 1 422730 0 YAQTQGTGGKK LIWNKDPEATEKLLRYAQTQGTGGKKVIQT KLLRYAQTQGTGGKKVIQTDEWRNGPVEER R Y A K K V 1 0 0 0 0 2 0 3 0 0 0 2 0 0 0 0 2 0 1 0 0 0 11 1 1137.5778 Q99707 Q99707 649 659 MTR Methionine synthase yes yes 2 0.001865 130.66 By MS/MS 3 0 1 1 79138 79138 0 15548 2260 16419 39726 31766 31766 1 1448 0 YASENVNK ESFNNVKQWLQEIDRYASENVNKLLVGNKC WLQEIDRYASENVNKLLVGNKCDLTTKKVV R Y A N K L 1 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 8 0 923.43486 P62820;Q9H0U4 P62820 112 119 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 2 0.0015009 148.04 By MS/MS 8.5 0.5 1 1 2 2169100 2169100 0 15549 1171;2416 16420 39727;39728 31767;31768;31769 31767 3 39670 0 YASWAASQINR SNPKASAKTKKDNMKYASWAASQINRAYQF DNMKYASWAASQINRAYQFAGRSKKETKYS K Y A N R A 3 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 0 11 0 1265.6153 Q15006 Q15006 256 266 EMC2 ER membrane protein complex subunit 2 yes yes 2 2.1833E-14 247.51 By MS/MS 8 0 1 1 1105000 1105000 0 15550 1470 16421 39729 31770 31770 1 13950 0 YATALYSAASK KLVRPPVQVYGIEGRYATALYSAASKQNKL IEGRYATALYSAASKQNKLEQVEKELLRVA R Y A S K Q 4 0 0 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 11 0 1144.5764 P48047 P48047 41 51 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 8.4061E-10 222.28 By MS/MS By MS/MS 9 0.707 1 2 1 3 1 60618000 60397000 221150 15551 932 16422 39730;39731;39732;39733 31771;31772;31773;31774;31775 31775 5 1169400 504290 YATDLLSVALNR DFQHSKGKEPYSSSKYATDLLSVALNRNFN SSKYATDLLSVALNRNFNQQGLYSNVACPG K Y A N R N 2 1 1 1 0 0 0 0 0 0 3 0 0 0 0 1 1 0 1 1 0 0 12 0 1334.7194 P56937 P56937 198 209 HSD17B7 3-keto-steroid reductase yes yes 2 1.7933E-08 206.73 By MS/MS 8 0 1 1 457740 457740 0 15552 1076 16423 39734 31776 31776 1 5779 0 YATGENTVFVDTK FCSIEGEWNGVMYAKYATGENTVFVDTKKL AKYATGENTVFVDTKKLPIIKKKVRKLEDQ K Y A T K K 1 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 3 0 1 2 0 0 13 0 1443.6882 Q96SU4 Q96SU4 633 645 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 1.5321E-07 206.36 By MS/MS 4 0 1 1 2129900 2129900 0 15553 2236 16424 39735 31777 31777 1 200430 0 YATLATVSR LPPNVRIMFEVQDLKYATLATVSRCGMVWF EVQDLKYATLATVSRCGMVWFSEDVLSTDM K Y A S R C 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 1 1 0 0 9 0 980.5291 Q14204 Q14204 2350 2358 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.9268E-05 175.51 By MS/MS By matching 1.75 0.829 2 1 1 3 1 3180400 3148000 32450 15554 1433 16425 39736;39737;39738;39739 31778;31779 31778 2 781100 32450 YATLSLFNTYK SEKSGQSTKAKDGKKYATLSLFNTYKGKSL DGKKYATLSLFNTYKGKSLETQKTTARHGL K Y A Y K G 1 0 1 0 0 0 0 0 0 0 2 1 0 1 0 1 2 0 2 0 0 0 11 0 1319.6762 Q9Y520 Q9Y520 17 27 PRRC2C Protein PRRC2C yes yes 2 0.0049503 104.05 By MS/MS 2 0 1 1 38705 38705 0 15555 2905 16426 39740 31780 31780 1 13092 0 YAVLYQPLFDK IEAKFYEEVHDLERKYAVLYQPLFDKRFEI LERKYAVLYQPLFDKRFEIINAIYEPTEEE K Y A D K R 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 1 0 0 11 0 1355.7125 P55209 P55209 106 116 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 0.0010957 119.68 By MS/MS 7 0.816 1 1 1 3 2073600 2073600 0 15556 1058 16427 39741;39742;39743 31781 31781 1 15417 0 YAVLYQPLFDKR IEAKFYEEVHDLERKYAVLYQPLFDKRFEI ERKYAVLYQPLFDKRFEIINAIYEPTEEEC K Y A K R F 1 1 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 1 0 0 12 1 1511.8136 P55209 P55209 106 117 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 0.0094869 107.4 By MS/MS 6 0 1 1 1687800 1687800 0 15557 1058 16428 39744 31782 31782 1 11603 0 YAVTTGDHGIIR DESGVFIYTTSNHIKYAVTTGDHGIIRTLD HIKYAVTTGDHGIIRTLDLPIYVTRVKGNN K Y A I R T 1 1 0 1 0 0 0 2 1 2 0 0 0 0 0 0 2 0 1 1 0 0 12 0 1301.6728 P53621 P53621 551 562 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 1.1518E-06 192.64 By MS/MS 3.33 1.49 1 2 2 2 1 1 9 9049200 9049200 0 15558 1034 16429 39745;39746;39747;39748;39749;39750;39751;39752;39753 31783;31784;31785;31786;31787 31786 5 735020 0 YAYTGECR MATNTVYVFAKKDSKYAYTGECRSCLENSS FAKKDSKYAYTGECRSCLENSSRPTSTIWV K Y A C R S 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 2 0 0 0 8 0 1018.4178 P30876 P30876 215 222 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.030906 89.752 By MS/MS 3 0 1 1 459390 459390 0 15559 781 16430 39754 31788 31788 1 8405.5 0 YAYYDTER PGRTMGVMFTPLTVKYAYYDTERIGVDLIM FTPLTVKYAYYDTERIGVDLIMKTCFSPNR K Y A E R I 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 8 0 1079.456 O00303 O00303 239 246 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.0029896 134.81 By MS/MS By matching 7.57 1.4 2 2 1 1 1 5 2 71829000 71391000 438470 15560 99 16431 39755;39756;39757;39758;39759;39760;39761 31789;31790 31789 2 684370 582900 YCALLLPLLK EFPLQQMDSPLDSSRYCALLLPLLKAWSPV LDSSRYCALLLPLLKAWSPVFRNYIKRAAD R Y C L K A 1 0 0 0 1 0 0 0 0 0 5 1 0 0 1 0 0 0 1 0 0 0 10 0 1202.7097 Q13144 Q13144 617 626 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 2 0.0040792 107.66 By MS/MS 5 0 1 1 31655 31655 0 15561 1357 16432 39762 31791 31791 1 317.48 0 YCAQDAFFQVK CIGGGVDLVTACDIRYCAQDAFFQVKEVDV CDIRYCAQDAFFQVKEVDVGLAADVGTLQR R Y C V K E 2 0 0 1 1 2 0 0 0 0 0 1 0 2 0 0 0 0 1 1 0 0 11 0 1375.6231 Q13011 Q13011 186 196 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 2.3332E-05 160.75 By MS/MS 8 0 1 1 1483600 1483600 0 15562 1345 16433 39763 31792 31792 1 18730 0 YCDPVVLTYQAER TEFELRKHARQEGRRYCDPVVLTYQAERMP RRYCDPVVLTYQAERMPEQIRLKVGGVDPK R Y C E R M 1 1 0 1 1 1 1 0 0 0 1 0 0 0 1 0 1 0 2 2 0 0 13 0 1612.7555 A5YKK6 A5YKK6 1540 1552 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 7.2713E-06 214.04 By MS/MS 2.5 0.5 1 1 2 573980 573980 0 15563 19 16434 39764;39765 31793;31794 31793 1 161580 0 YCDSLLKK KMAQSSSKSPELLARYCDSLLKKSSKNPEE SPELLARYCDSLLKKSSKNPEEAELEDTLN R Y C K K S 0 0 0 1 1 0 0 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 8 1 1025.5216 Q13616 Q13616 425 432 CUL1 Cullin-1 yes yes 2 0.018439 123.69 By MS/MS 4 0 1 1 1041800 1041800 0 15564 1402 16435 39766 31795 31795 1 98038 0 YCFPNYVGRPK SGVIKAGFAGDQIPKYCFPNYVGRPKHVRV QIPKYCFPNYVGRPKHVRVMAGALEGDIFI K Y C P K H 0 1 1 0 1 0 0 1 0 0 0 1 0 1 2 0 0 0 2 1 0 0 11 1 1399.6707 P61163 P61163 33 43 ACTR1A Alpha-centractin no no 2;3 0.0003911 153.71 By MS/MS 7 0 2 2 3849500 3849500 0 15565 1113 16436 39767;39768 31796;31797 31797 2 60430 0 YCIFDLATGK SKGVHAVLKTGNWVRYCIFDLATGKAEQEN GNWVRYCIFDLATGKAEQENNFPTSSIAFL R Y C G K A 1 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 1 0 1 0 0 0 10 0 1186.5692 O95071 O95071 768 777 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.00058636 131.62 By MS/MS 3 1.41 1 1 1 1 1 5 911860 911860 0 15566 384 16437 39769;39770;39771;39772;39773 31798;31799;31800 31798 2 175790 0 YCILGLAR TQGIPYQDYFYTAHRYCILGLARNKARLRV YFYTAHRYCILGLARNKARLRVSSEIRYRK R Y C A R N 1 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 0 8 0 964.51642 Q96CP6 Q96CP6 479 486 GRAMD1A GRAM domain-containing protein 1A yes yes 2 0.037684 111.69 By MS/MS 4 0 1 1 423030 423030 0 15567 2123 16438 39774 31801 31801 0 39810 0 YCVLASLDER KLLVVGITDPDPDIRYCVLASLDERFDAHL DPDIRYCVLASLDERFDAHLAQAENLQALF R Y C E R F 1 1 0 1 1 0 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1224.5809 P42345 P42345 673 682 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00063603 130.66 By MS/MS 2 0 1 1 323970 323970 0 15568 879 16439 39775 31802 31802 1 109580 0 YDAFLASESLIK KLNKNKKLVKKLAKKYDAFLASESLIKQIP AKKYDAFLASESLIKQIPRILGPGLNKAGK K Y D I K Q 2 0 0 1 0 0 1 0 0 1 2 1 0 1 0 2 0 0 1 0 0 0 12 0 1355.6973 P62906 P62906 107 118 RPL10A 60S ribosomal protein L10a yes yes 2 6.7933E-09 218.6 By MS/MS 8 0 1 1 348860 348860 0 15569 1184 16440 39776 31803 31803 1 4404.3 0 YDDAIQLYDR RVKRLTGMRFEAMERYDDAIQLYDRILQED EAMERYDDAIQLYDRILQEDPTNTAARKRK R Y D D R I 1 1 0 3 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 0 10 0 1270.583 Q15006 Q15006 103 112 EMC2 ER membrane protein complex subunit 2 yes yes 2 2.497E-05 164.66 By MS/MS 9 1 1 1 2 4606500 4606500 0 15570 1470 16441 39777;39778 31804;31805;31806 31804 3 64465 0 YDDGRGPPGNPPR DVKKRRSYGNSSDSRYDDGRGPPGNPPRRM SRYDDGRGPPGNPPRRMGRINHLRGPSPPP R Y D P R R 0 2 1 2 0 0 0 3 0 0 0 0 0 0 4 0 0 0 1 0 0 0 13 1 1396.6484 Q9Y6D0 Q9Y6D0 60 72 SELK Selenoprotein K yes yes 3 0.0032475 103.21 By MS/MS 10 0 1 1 350440 350440 0 15571 2939 16442 39779 31807 31807 1 18887 0 YDDPEVQKDIK PNNTFYATKRLIGRRYDDPEVQKDIKNVPF IGRRYDDPEVQKDIKNVPFKIVRASNGDAW R Y D I K N 0 0 0 3 0 1 1 0 0 1 0 2 0 0 1 0 0 0 1 1 0 0 11 1 1348.6511 P38646 P38646 128 138 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 0.00079776 130.01 By MS/MS By matching 5 0 3 2 1 8510000 8474800 35215 15572 850 16443 39780;39781;39782 31808;31809 31808 2 84998 29573 YDEAIDCYTK LVLKEKGNKYFKQGKYDEAIDCYTKGMDAD FKQGKYDEAIDCYTKGMDADPYNPVLPTNR K Y D T K G 1 0 0 2 1 0 1 0 0 1 0 1 0 0 0 0 1 0 2 0 0 0 10 0 1276.5282 Q9H6T3 Q9H6T3 149 158 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.019002 87.298 By MS/MS 5 0 1 1 766730 766730 0 15573 2459 16444 39783 31810 31810 1 7689.9 0 YDECLAVYR KLKELYGQVLYRLERYDECLAVYRDLVRNS LYRLERYDECLAVYRDLVRNSQDDYDEERK R Y D Y R D 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 9 0 1187.5281 O76094 O76094 125 133 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.00069119 146.58 By MS/MS 5 0 1 1 4407400 4407400 0 15574 362 16445 39784 31811 31811 1 44204 0 YDEEFQR LKSQICDNAALYAQKYDEEFQRYLPRFVTA NAALYAQKYDEEFQRYLPRFVTAIWNLLVT K Y D Q R Y 0 1 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 7 0 985.41412 P55060 P55060 282 288 CSE1L Exportin-2 yes yes 2 0.012068 130.04 By MS/MS 4.5 0.5 1 1 2 1998100 1998100 0 15575 1053 16446 39785;39786 31812 31812 1 176070 0 YDESDNAFIR ENNVVFNRFFEMKMKYDESDNAFIRASRAL EMKMKYDESDNAFIRASRALTDKVTDLLGG K Y D I R A 1 1 1 2 0 0 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 10 0 1228.536 O43615 O43615 265 274 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0069062 120.31 By MS/MS 7.5 0.5 1 1 2 3206900 3206900 0 15576 221 16447 39787;39788 31813 31813 1 49378 0 YDFTSSR YLLFYFRVPFIYGHKYDFTSSRHTVVHLAC VPFIYGHKYDFTSSRHTVVHLACICHSFHY K Y D S R H 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 2 1 0 1 0 0 0 7 0 874.3821 Q9NZ01 Q9NZ01 117 123 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.03068 104.21 By MS/MS 2 0.816 1 1 1 3 1221400 1221400 0 15577 2642 16448 39789;39790;39791 31814;31815 31815 2 295660 0 YDGEDLAYTVK LEMEEETSGYGFKPKYDGEDLAYTVKNLRR FKPKYDGEDLAYTVKNLRRSTKYKFKVIAY K Y D V K N 1 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 1 0 2 1 0 0 11 0 1272.5874 Q9Y2H6 Q9Y2H6 518 528 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 6.3598E-06 176.6 By MS/MS 3.5 0.5 1 1 2 1559800 1559800 0 15578 2828 16449 39792;39793 31816 31816 1 69861 0 YDGIILPGK HRISKEEAMRWFQQKYDGIILPGK______ RWFQQKYDGIILPGK_______________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 9 0 974.54368 P62913 P62913 170 178 RPL11 60S ribosomal protein L11 yes yes 2 0.00071547 140.09 By MS/MS By MS/MS 9.25 0.433 3 1 3 1 8367400 8284300 83100 15579 1186 16450 39794;39795;39796;39797 31817;31818;31819 31818 3 165990 189490 YDGQVAVFGSDLQEK KEVLTEDKCLQRQNRYDGQVAVFGSDLQEK YDGQVAVFGSDLQEKLGKQKYFLVGAGAIG R Y D E K L 1 0 0 2 0 2 1 2 0 0 1 1 0 1 0 1 0 0 1 2 0 0 15 0 1654.7839 P22314 P22314 451 465 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 1.0177E-05 201.3 By MS/MS 4 0 1 1 1047300 1047300 0 15580 691 16451 39798 31820 31820 1 98556 0 YDKKIVQDK Y D D K 0 0 0 2 0 1 0 0 0 1 0 3 0 0 0 0 0 0 1 1 0 0 9 2 1135.6237 REV__P19367 yes yes 3 0.012406 122.19 By MS/MS 3 0 1 1 909750 909750 0 + 15581 2956 16452 39799 31821 31821 1 16646 0 YDLSALVR EKEDLLCGATDGKKRYDLSALVRHAEPEQN ATDGKKRYDLSALVRHAEPEQNWEAVDGSQ R Y D V R H 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 8 0 935.50763 P11717 P11717 484 491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0055942 122.74 By MS/MS 2 0.816 1 1 1 3 537820 537820 0 15582 583 16453 39800;39801;39802 31822;31823 31822 2 135320 0 YDPEGDNTGEQVAVK RDLGEGHFGKVELCRYDPEGDNTGEQVAVK YDPEGDNTGEQVAVKSLKPESGGNHIADLK R Y D V K S 1 0 1 2 0 1 2 2 0 0 0 1 0 0 1 0 1 0 1 2 0 0 15 0 1620.7267 P23458 P23458 894 908 JAK1 Tyrosine-protein kinase JAK1 yes yes 2 0.00053287 173.06 By MS/MS 3 0 1 1 239140 239140 0 15583 704 16454 39803 31824 31824 1 4375.6 0 YDVLICR MVNKVLVRHRINHQRYDVLICRIVKGYTLA RHRINHQRYDVLICRIVKGYTLADEEEDPL R Y D C R I 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 7 0 937.46914 P42345 P42345 1209 1215 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.029475 105.12 By MS/MS 2.5 0.5 1 1 2 1285700 1285700 0 15584 879 16455 39804;39805 31825 31825 1 289950 0 YDWDLLAAR ITWNRKKLGEFFQTKYDWDLLAARSIWAFG EFFQTKYDWDLLAARSIWAFGPDATGPNIL K Y D A R S 2 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 9 0 1121.5506 Q15029 Q15029 722 730 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0022215 118.5 By MS/MS 4.5 1.12 1 1 1 1 4 591470 591470 0 15585 1476 16456 39806;39807;39808;39809 31826 31826 1 20083 0 YDYLEFTDAR YFEVEFDDRCETEKRYDYLEFTDARGRKTR ETEKRYDYLEFTDARGRKTRYDTKVGTDKW R Y D A R G 1 1 0 2 0 0 1 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 10 0 1291.5721 O43149 O43149 1135 1144 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.00046342 133.99 By MS/MS 1.5 0.5 1 1 2 69016 69016 0 15586 191 16457 39810;39811 31827;31828 31828 2 23344 0 YDYNSGEELESYK KEFLVAGGEDFKLYKYDYNSGEELESYKGH YKYDYNSGEELESYKGHFGPIHCVRFSPDG K Y D Y K G 0 0 1 1 0 0 3 1 0 0 1 1 0 0 0 2 0 0 3 0 0 0 13 0 1595.6627 Q9Y3F4 Q9Y3F4 250 262 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 3.4198E-24 277.15 By MS/MS 7 0 1 1 1244300 1244300 0 15587 2877 16458 39812 31829 31829 1 19533 0 YDYQRQPDSGISSIR DLKHTGAVLKGPFSRYDYQRQPDSGISSIR YDYQRQPDSGISSIRSFKTILPAAAQDVYY R Y D I R S 0 2 0 2 0 2 0 1 0 2 0 0 0 0 1 3 0 0 2 0 0 0 15 1 1783.8489 P04843 P04843 264 278 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.00029302 151.16 By MS/MS 4.8 2.04 1 2 1 1 5 12652000 12652000 0 15588 478 16459 39813;39814;39815;39816;39817 31830;31831;31832 31831 3 166810 0 YEAAGTLVTLSSAPTAIK RCIYNLLQSSSPAVKYEAAGTLVTLSSAPT AGTLVTLSSAPTAIKAAAQCYIDLIIKESD K Y E I K A 4 0 0 0 0 0 1 1 0 1 2 1 0 0 1 2 3 0 1 1 0 0 18 0 1791.9618 P53618 P53618 262 279 COPB1 Coatomer subunit beta yes yes 2;3 1.4015E-44 325.57 By MS/MS 3.86 1.64 1 1 2 2 1 7 29070000 29070000 0 15589 1033 16460 39818;39819;39820;39821;39822;39823;39824 31833;31834;31835;31836 31834 4 2277800 0 YEAAIQR LEERQRQKLEKNKERYEAAIQRSVKKTWAE KLEKNKERYEAAIQRSVKKTWAEIRQQRWS R Y E Q R S 2 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 7 0 849.43447 Q3KQU3 Q3KQU3 211 217 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.017261 116.54 By MS/MS 3.5 0.5 1 1 2 1530300 1530300 0 15590 1575 16461 39825;39826 31837 31837 1 59283 0 YEATSVQQK DLVIRLRRPPLRYPRYEATSVQQKVNFSEE PLRYPRYEATSVQQKVNFSEEGETEEDDQD R Y E Q K V 1 0 0 0 0 2 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 9 0 1052.5138 Q5JTV8 Q5JTV8 203 211 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 7.3126E-05 167.23 By MS/MS 6 0 1 1 2633400 2633400 0 15591 1611 16462 39827 31838 31838 1 18102 0 YEDEINKR ELNNMQDLVEDYKKKYEDEINKRTAAENDF VEDYKKKYEDEINKRTAAENDFVTLKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1065.5091 CON__P04264;CON__H-INV:HIT000016045;P04264;CON__P13647;P13647;CON__P05787;P05787;CON__Q922U2;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P04259;CON__P48668;P48668;CON__P12035;P12035;CON__Q3TTY5;CON__ENSEMBL:ENSBTAP00000038253;CON__Q7Z794;Q7Z794 CON__P35908v2 268 275 KRT1;KRT5;KRT8;KRT2;KRT6A;KRT75;KRT6C;KRT3;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 1b no no 2;3 0.0049726 134.81 By MS/MS By MS/MS 4.09 2.61 4 6 7 5 2 3 1 2 2 15 17 64029000 26784000 37245000 + 15592 55;471;45;52;44;56;40;74;48;65;34;72 16463 39828;39829;39830;39831;39832;39833;39834;39835;39836;39837;39838;39839;39840;39841;39842;39843;39844;39845;39846;39847;39848;39849;39850;39851;39852;39853;39854;39855;39856;39857;39858;39859 31839;31840;31841;31842;31843;31844;31845;31846;31847;31848;31849;31850;31851;31852;31853;31854;31855;31856;31857;31858;31859 31840 21 2619500 21004000 YEDFGPLFTAK KYVEFMKDNYPPSFKYEDFGPLFTAKFFNA PSFKYEDFGPLFTAKFFNANQWADIFQASG K Y E A K F 1 0 0 1 0 0 1 1 0 0 1 1 0 2 1 0 1 0 1 0 0 0 11 0 1286.6183 Q9BTY2 Q9BTY2 100 110 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.0002588 137.98 By MS/MS 6 0 1 1 1128200 1128200 0 15593 2320 16464 39860 31860 31860 1 7755.4 0 YEDFSNLGTTHLLR SPVSRIGLFIKAGSRYEDFSNLGTTHLLRL RYEDFSNLGTTHLLRLTSSLTTKGASSFKI R Y E L R L 0 1 1 1 0 0 1 1 1 0 3 0 0 1 0 1 2 0 1 0 0 0 14 0 1664.8158 P22695 P22695 71 84 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 1.7226E-07 218.94 By MS/MS 7 0 2 2 6168700 6168700 0 15594 696 16465 39861;39862 31861;31862 31862 2 96838 0 YEDICPSTHNMDVPNIK AKVHLVGIDIFTGKKYEDICPSTHNMDVPN DICPSTHNMDVPNIKRNDFQLIGIQDGYLS K Y E I K R 0 0 2 2 1 0 1 0 1 2 0 1 1 0 2 1 1 0 1 1 0 0 17 0 2031.903 P63241;Q6IS14;Q9GZV4 P63241 69 85 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 3 0.012893 83.292 By MS/MS 9.5 0.5 1 1 2 1966000 1966000 0 15595 1201 16466 39863;39864 31863 31863 699 1 89608 0 YEDQELTGK RREKEMLERLEKQKRYEDQELTGKNLPAFR LEKQKRYEDQELTGKNLPAFRLVDTPEGLP R Y E G K N 0 0 0 1 0 1 2 1 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 1081.4928 Q9UIG0 Q9UIG0 580 588 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.00049743 146.79 By MS/MS 2 0 1 1 391440 391440 0 15596 2742 16467 39865 31864 31864 1 132400 0 YEDQLKQQQLLNEENLR HQARAQYQDKLARQRYEDQLKQQQLLNEEN DQLKQQQLLNEENLRKQEESVQKQEAMRRA R Y E L R K 0 1 2 1 0 4 3 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 17 1 2160.0811 Q9NVI7;Q5T9A4 Q5T9A4 141 157 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B no no 2 8.1911E-11 244.23 By MS/MS 5 0 1 1 1568900 1568900 0 15597 2598;1638 16468 39866 31865 31865 1 15735 0 YEEEVSLR ELNHVQEVLEGYKKKYEEEVSLRATAENEF LEGYKKKYEEEVSLRATAENEFVALKKDVD K Y E L R A 0 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 1023.4873 CON__O43790;CON__Q14533;O43790;Q14533 CON__O43790 194 201 KRT86;KRT81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 yes no 2 0.013567 116.25 By MS/MS 10 0 1 1 158500 0 158500 + 15598 35 16469 39867 31866 31866 1 0 202930 YEEIDNAPEER ITKILAEGGGAKFKKYEEIDNAPEERARGI KFKKYEEIDNAPEERARGITINAAHVEYST K Y E E R A 1 1 1 1 0 0 4 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 11 0 1363.5892 P49411 P49411 92 102 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.1367E-05 171.92 By MS/MS 8.67 1.25 1 1 1 3 17071000 17071000 0 15599 949 16470 39868;39869;39870 31867;31868;31869 31867 3 316780 0 YEEIVKEVSTYIK VNKMDSTEPPYSQKRYEEIVKEVSTYIKKI KRYEEIVKEVSTYIKKIGYNPDTVAFVPIS R Y E I K K 0 0 0 0 0 0 3 0 0 2 0 2 0 0 0 1 1 0 2 2 0 0 13 1 1599.8396 Q5VTE0;P68104 Q5VTE0 167 179 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 5.1987E-11 219.92 By MS/MS 6.8 0.748 2 2 1 5 6935500 6935500 0 15600 1209 16471 39871;39872;39873;39874;39875 31870;31871;31872 31872 3 76630 0 YEEIVKEVSTYIKK VNKMDSTEPPYSQKRYEEIVKEVSTYIKKI RYEEIVKEVSTYIKKIGYNPDTVAFVPISG R Y E K K I 0 0 0 0 0 0 3 0 0 2 0 3 0 0 0 1 1 0 2 2 0 0 14 2 1727.9346 Q5VTE0;P68104 Q5VTE0 167 180 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3 0.0010981 172.58 By MS/MS 6.5 0.5 1 1 2 2909900 2909900 0 15601 1209 16472 39876;39877 31873 31873 1 32196 0 YEELFPAFSDSR HFCIDMLNAKLAVQKYEELFPAFSDSRECK VQKYEELFPAFSDSRECKLMKKLLEAHEEQ K Y E S R E 1 1 0 1 0 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 0 12 0 1459.662 P54920 P54920 228 239 NAPA Alpha-soluble NSF attachment protein yes yes 2 0.014463 88.187 By MS/MS 8 0 1 1 470250 470250 0 15602 1049 16473 39878 31874 31874 1 5936.9 0 YEELQITAGR AQKSKAEAESLYQSKYEELQITAGRHGDSV LYQSKYEELQITAGRHGDSVRNSKIEISEL K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1178.5932 CON__P04264;P04264 P04264 377 386 KRT1 Keratin, type II cytoskeletal 1 no no 2 8.3891E-09 201.61 By MS/MS By MS/MS 5.21 2.78 3 2 2 3 4 2 2 2 2 2 13 11 542850000 274280000 268560000 + 15603 471;45 16474 39879;39880;39881;39882;39883;39884;39885;39886;39887;39888;39889;39890;39891;39892;39893;39894;39895;39896;39897;39898;39899;39900;39901;39902 31875;31876;31877;31878;31879;31880;31881;31882;31883;31884;31885;31886;31887;31888;31889;31890;31891;31892;31893;31894;31895;31896;31897;31898;31899;31900;31901;31902;31903;31904;31905;31906;31907 31878 32 20885000 119410000 YEELQQTAGR ANRSRTEAESWYQTKYEELQQTAGRHGDDL WYQTKYEELQQTAGRHGDDLRNTKHEISEM K Y E G R H 1 1 0 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1193.5677 CON__P13647;P13647;CON__Q922U2 CON__P13647 365 374 KRT5 Keratin, type II cytoskeletal 5 no no 2 5.0343E-17 242.12 By MS/MS By MS/MS 5.06 2.79 2 2 1 2 2 2 2 1 2 8 8 20851000 15286000 5564700 + 15604 52;74 16475 39903;39904;39905;39906;39907;39908;39909;39910;39911;39912;39913;39914;39915;39916;39917;39918 31908;31909;31910;31911;31912;31913;31914;31915;31916;31917;31918;31919;31920;31921;31922 31914 15 1214900 7300800 YEELQVTAGR AQRSRAEAESWYQTKYEELQVTAGRHGDDL WYQTKYEELQVTAGRHGDDLRNTKQEIAEI K Y E G R H 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1164.5775 CON__P02538;P02538;CON__O95678;O95678;CON__P04259;CON__P48668;P48668 CON__P04259 360 369 KRT6A;KRT75;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C no no 2 0.00072957 134.57 By MS/MS By MS/MS 4.83 3.02 2 2 1 1 1 1 1 1 1 1 5 7 6565600 5116800 1448800 + 15605 44;56;40 16476 39919;39920;39921;39922;39923;39924;39925;39926;39927;39928;39929;39930 31923;31924;31925;31926;31927;31928;31929;31930;31931;31932;31933 31932 10 355820 1830400 YEELQVTVGR AQRSKEEAEALYHSKYEELQVTVGRHGDSL LYHSKYEELQVTVGRHGDSLKEIKIEISEL K Y E G R H 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 2 0 0 10 0 1192.6088 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 375 384 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.9176E-09 204.34 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 68613000 23035000 45578000 + 15606 55 16477 39931;39932;39933;39934;39935;39936;39937;39938;39939;39940;39941;39942;39943;39944;39945;39946;39947;39948;39949 31934;31935;31936;31937;31938;31939;31940;31941;31942;31943;31944;31945;31946;31947;31948;31949;31950;31951;31952 31938 19 1844800 13355000 YEFGESDLR IQERLRYAPLGWSKKYEFGESDLRSACDTV LGWSKKYEFGESDLRSACDTVDTWLDDTAK K Y E L R S 0 1 0 1 0 0 2 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 9 0 1114.4931 Q14204 Q14204 4205 4213 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.012343 96.331 By MS/MS 1.5 0.5 1 1 2 719690 719690 0 15607 1433 16478 39950;39951 31953 31953 1 206240 0 YEGFFGLYR LMYKNSFDCFKKVLRYEGFFGLYRGLLPQL FKKVLRYEGFFGLYRGLLPQLLGVAPEKAI R Y E Y R G 0 1 0 0 0 0 1 2 0 0 1 0 0 2 0 0 0 0 2 0 0 0 9 0 1150.5447 Q9UJS0;O75746 Q9UJS0 384 392 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.00082268 136.8 By MS/MS 6.5 1.12 1 1 1 1 4 8729700 8729700 0 15608 2748;344 16479 39952;39953;39954;39955 31954;31955;31956;31957;31958 31954 5 86173 0 YEGGYPALTEVMNK NTWYGEQDQAVHLWRYEGGYPALTEVMNKL RYEGGYPALTEVMNKLRENKEFLEFRKARS R Y E N K L 1 0 1 0 0 0 2 2 0 0 1 1 1 0 1 0 1 0 2 1 0 0 14 0 1570.7337 O75323 O75323 130 143 GBAS Protein NipSnap homolog 2 yes yes 2 3.9891E-07 205.12 By MS/MS 8 0 2 2 1842700 1842700 0 15609 310 16480;16481 39956;39957 31959;31960;31961;31962 31959 133 4 23264 0 YEIKDIHVPPR AINQAADCWGIRCLRYEIKDIHVPPRVKES RCLRYEIKDIHVPPRVKESMQMQVEAERRK R Y E P R V 0 1 0 1 0 0 1 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 11 1 1365.7405 Q9UJZ1 Q9UJZ1 175 185 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 0.051242 83.397 By MS/MS 7 0 1 1 2130700 2130700 0 15610 2755 16482 39958 31963 31963 1 33448 0 YEILTPNAIPK QGFPNRIVFQEFRQRYEILTPNAIPKGFMD FRQRYEILTPNAIPKGFMDGKQACERMIRA R Y E P K G 1 0 1 0 0 0 1 0 0 2 1 1 0 0 2 0 1 0 1 0 0 0 11 0 1257.6969 P35580;Q7Z406 P35580 728 738 MYH10;MYH14 Myosin-10;Myosin-14 no no 2 2.3417E-05 163.38 By MS/MS 2.5 0.5 1 1 2 734610 734610 0 15611 825;1788 16483 39959;39960 31964;31965 31964 1 197590 0 YEILTPNSIPK QGFPNRVVFQEFRQRYEILTPNSIPKGFMD FRQRYEILTPNSIPKGFMDGKQACVLMIKA R Y E P K G 0 0 1 0 0 0 1 0 0 2 1 1 0 0 2 1 1 0 1 0 0 0 11 0 1273.6918 P35579 P35579 721 731 MYH9 Myosin-9 yes yes 2 0.00037769 133.99 By MS/MS 2 0 1 1 910890 910890 0 15612 824 16484 39961 31966 31966 1 308100 0 YEKDIAAYR DKQPYEKKAAKLKEKYEKDIAAYRAKGKPD AKLKEKYEKDIAAYRAKGKPDAAKKGVVKA K Y E Y R A 2 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 9 1 1127.5611 P09429;P26583 P09429 155 163 HMGB1;HMGB2 High mobility group protein B1;High mobility group protein B2 yes no 3 0.01817 101.46 By MS/MS 8.5 0.5 1 1 2 845380 845380 0 15613 535 16485 39962;39963 31967 31967 1 11039 0 YEKEKFEEMIQQIK KLDVTSVEDYKALQKYEKEKFEEMIQQIKE KYEKEKFEEMIQQIKETGANLAICQWGFDD K Y E I K E 0 0 0 0 0 2 4 0 0 2 0 3 1 1 0 0 0 0 1 0 0 0 14 2 1841.9233 P48643 P48643 280 293 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.00062548 193.28 By MS/MS 6 0 1 1 5988100 5988100 0 15614 940 16486 39964 31968 31968 1 41164 0 YELALILK ______________________________ ______________________________ R Y E L K A 1 0 0 0 0 0 1 0 0 1 3 1 0 0 0 0 0 0 1 0 0 0 8 0 961.58482 P82932 P82932 4 11 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.039514 86.472 By MS/MS 10 0 1 1 128820 128820 0 15615 1238 16487 39965 31969 31969 1 6943.1 0 YELGRPAANTK RKTGGKRKPYHKKRKYELGRPAANTKIGPR KKRKYELGRPAANTKIGPRRIHTVRVRGGN K Y E T K I 2 1 1 0 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 11 1 1218.6357 P62241 P62241 27 37 RPS8 40S ribosomal protein S8 yes yes 2 0.00059191 150.15 By MS/MS 9 0.816 1 1 1 3 9272600 9272600 0 15616 1143 16488 39966;39967;39968 31970;31971 31970 2 128230 0 YELQLANPK WNYNFMGVRHDPNMKYELQLANPKEFYHEV HDPNMKYELQLANPKEFYHEVHRPSHFLNF K Y E P K E 1 0 1 0 0 1 1 0 0 0 2 1 0 0 1 0 0 0 1 0 0 0 9 0 1074.571 Q6P2Q9 Q6P2Q9 2294 2302 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.023754 87.308 By MS/MS 1.5 0.5 1 1 2 434140 434140 0 15617 1708 16489 39969;39970 31972 31972 1 143800 0 YELQQLEGSSDR SEILSKKQNELKNVKYELQQLEGSSDRILE NVKYELQQLEGSSDRILELDQELIKAEREL K Y E D R I 0 1 0 1 0 2 2 1 0 0 2 0 0 0 0 2 0 0 1 0 0 0 12 0 1423.6579 Q92878 Q92878 462 473 RAD50 DNA repair protein RAD50 yes yes 2 1.1457E-08 213.63 By MS/MS 3 0 1 1 686250 686250 0 15618 2074 16490 39971 31973 31973 1 12556 0 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 992.49271 CON__P13645;P13645 CON__P13645 238 245 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.000873 154.12 By MS/MS By MS/MS 5.33 2.9 2 3 2 2 2 2 2 2 2 2 10 11 56498000 33900000 22597000 + 15619 50 16491 39972;39973;39974;39975;39976;39977;39978;39979;39980;39981;39982;39983;39984;39985;39986;39987;39988;39989;39990;39991;39992 31974;31975;31976;31977;31978;31979;31980;31981;31982;31983;31984;31985;31986;31987;31988;31989;31990;31991;31992 31987 18 2596400 26231000 YEREQYADR QASAAARNSLYDMARYEREQYADRARYSAF LYDMARYEREQYADRARYSAF_________ R Y E D R A 1 2 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 9 1 1228.5473 Q9BWF3 Q9BWF3 350 358 RBM4 RNA-binding protein 4 yes yes 3 0.036934 72.325 By MS/MS 7 0 1 1 716570 716570 0 15620 2347 16492 39993 31993 31993 1 11249 0 YESGDHVAVYPANDSALVNQLGK HLMHLELDISDSKIRYESGDHVAVYPANDS VYPANDSALVNQLGKILGADLDVVMSLNNL R Y E G K I 3 0 2 2 0 1 1 2 1 0 2 1 0 0 1 2 0 0 2 3 0 0 23 0 2446.1765 P16435 P16435 314 336 POR NADPH--cytochrome P450 reductase yes yes 3 1.5044E-07 140.35 By MS/MS 5.5 0.5 1 1 2 2227500 2227500 0 15621 634 16493 39994;39995 31994 31994 1 20763 0 YESHPVCADLQAK QYQKAAEEVEAKFKRYESHPVCADLQAKIL KRYESHPVCADLQAKILQCYRENTHQTLKC R Y E A K I 2 0 0 1 1 1 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 13 0 1516.698 Q9NX63 Q9NX63 177 189 CHCHD3 MICOS complex subunit MIC19 yes yes 3 0.0050727 128.57 By MS/MS 8 0 1 1 1253900 1253900 0 15622 2621 16494 39996 31995 31995 1 15830 0 YESLTDPSK RELISNASDALDKIRYESLTDPSKLDSGKE ALDKIRYESLTDPSKLDSGKELKIDIIPNP R Y E S K L 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 2 1 0 1 0 0 0 9 0 1038.487 P07900;Q58FF6;P08238;Q58FF7;Q58FF8 P08238 56 64 HSP90AA1;HSP90AB4P;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 2 0.00086619 135.71 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 5780500 5715800 64678 15623 521;513 16495 39997;39998;39999;40000;40001 31996 31996 1 452550 137810 YESLTDPSKLDSGK RELISNASDALDKIRYESLTDPSKLDSGKE RYESLTDPSKLDSGKELKIDIIPNPQERTL R Y E G K E 0 0 0 2 0 0 1 1 0 0 2 2 0 0 1 3 1 0 1 0 0 0 14 1 1538.7464 P07900;P08238;Q58FF7;Q58FF8 P08238 56 69 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 2 9.4188E-16 250.26 By MS/MS 4.5 0.5 1 1 2 6610600 6610600 0 15624 521;513 16496 40002;40003 31997 31997 1 594530 0 YESLTDPSKLDSGKELK RELISNASDALDKIRYESLTDPSKLDSGKE SLTDPSKLDSGKELKIDIIPNPQERTLTLV R Y E L K I 0 0 0 2 0 0 2 1 0 0 3 3 0 0 1 3 1 0 1 0 0 0 17 2 1908.968 P08238;Q58FF7;Q58FF8 P08238 56 72 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 yes no 3;4 0.00065536 121.24 By MS/MS 4 0 2 2 9082600 9082600 0 15625 521 16497 40004;40005 31998;31999 31998 2 854740 0 YESSALPSGQLTSLSEYASR ATEQEVKEDIAKLLRYESSALPSGQLTSLS LPSGQLTSLSEYASRMRAGTRNIYYLCAPN R Y E S R M 2 1 0 0 0 1 2 1 0 0 3 0 0 0 1 6 1 0 2 0 0 0 20 0 2145.0226 Q12931 Q12931 470 489 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 1.7212E-18 292.76 By MS/MS 6 0.816 1 1 1 3 3626900 3626900 0 15626 1340 16498 40006;40007;40008 32000 32000 1 35163 0 YESSTASALVA ARYYKTKRVLPPNWKYESSTASALVA____ PNWKYESSTASALVA_______________ K Y E V A - 3 0 0 0 0 0 1 0 0 0 1 0 0 0 0 3 1 0 1 1 0 0 11 0 1097.5241 P62277 P62277 141 151 RPS13 40S ribosomal protein S13 yes yes 2 0.0026521 110.12 By MS/MS By matching 9.33 0.471 2 1 2 1 7960400 7930900 29469 15627 1151 16499 40009;40010;40011 32001;32002 32001 2 195190 67199 YETFISDVLQR PKRRAVEATGEKVLRYETFISDVLQRDLRK KVLRYETFISDVLQRDLRKVLDHRDKVYEQ R Y E Q R D 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 11 0 1369.6878 Q9UBK9 Q9UBK9 20 30 UXT Protein UXT yes yes 2 9.9431E-07 190.88 By MS/MS 9.5 0.5 1 1 2 323900 323900 0 15628 2700 16500 40012;40013 32003;32004;32005 32005 3 11924 0 YETGPGGTSR EQKGNRVDGSKPIWKYETGPGGTSRGKPAV KPIWKYETGPGGTSRGKPAVGDMLRKSSDS K Y E S R G 0 1 0 0 0 0 1 3 0 0 0 0 0 0 1 1 2 0 1 0 0 0 10 0 1023.4621 Q7Z417 Q7Z417 282 291 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0052152 105.1 By MS/MS 4.5 0.5 1 1 2 585590 585590 0 15629 1789 16501 40014;40015 32006 32006 1 14337 0 YEVAVPLCK RTLHNLVIQYASQGRYEVAVPLCKQALEDL YASQGRYEVAVPLCKQALEDLEKTSGHDHP R Y E C K Q 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 1 2 0 0 9 0 1077.5529 Q07866;Q9H0B6;Q9NSK0 Q9H0B6 214 222 KLC1;KLC2;KLC4 Kinesin light chain 1;Kinesin light chain 2;Kinesin light chain 4 no no 2 0.033093 83.265 By MS/MS 5 0 1 1 2052600 2052600 0 15630 2405;2572;1303 16502 40016 32007 32007 1 20586 0 YEVTSGGGGTSR TLGRMIRAESGPDLRYEVTSGGGGTSRMYY DLRYEVTSGGGGTSRMYYSRRGVITDQNSD R Y E S R M 0 1 0 0 0 0 1 4 0 0 0 0 0 0 0 2 2 0 1 1 0 0 12 0 1169.5313 P15924 P15924 28 39 DSP Desmoplakin yes yes 2 1.2173E-19 229.82 By MS/MS By MS/MS 4.92 3.3 2 2 2 1 1 2 2 6 6 4440100 2547200 1892900 15631 628 16503 40017;40018;40019;40020;40021;40022;40023;40024;40025;40026;40027;40028 32008;32009;32010;32011;32012;32013;32014 32009 7 450600 1044600 YEWDVAEAR ARQELKQRARYLAEKYEWDVAEARKIWCFG RYLAEKYEWDVAEARKIWCFGPDGTGPNIL K Y E A R K 2 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 9 0 1137.5091 P13639 P13639 639 647 EEF2 Elongation factor 2 yes yes 2 0.0012025 131.44 By MS/MS 4.5 0.5 1 1 2 3606800 3606800 0 15632 602 16504 40029;40030 32015 32015 1 285830 0 YFDLGLPNR IKEKLILPHVDIQLKYFDLGLPNRDQTDDQ VDIQLKYFDLGLPNRDQTDDQVTIDSALAT K Y F N R D 0 1 1 1 0 0 0 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 9 0 1093.5556 P48735 P48735 81 89 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.0093177 101.64 By MS/MS 7 0 1 1 396260 396260 0 15633 942 16505 40031 32016 32016 1 6220.6 0 YFDTAVSRPGR GLALTETWACSHSMRYFDTAVSRPGRGEPR HSMRYFDTAVSRPGRGEPRFISVGYVDDTQ R Y F G R G 1 2 0 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 1 1 0 0 11 1 1267.6309 P10321 P10321 31 41 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 0.0054298 119.62 By MS/MS 7 0 1 1 665170 665170 0 15634 558 16506 40032 32017 32017 1 10442 0 YFDWILISR LHGFITMHSCSINGKYFDWILISRRSCFRA CSINGKYFDWILISRRSCFRAGVRYYVRGI K Y F S R R 0 1 0 1 0 0 0 0 0 2 1 0 0 1 0 1 0 1 1 0 0 0 9 0 1211.6339 Q9NTJ5 Q9NTJ5 205 213 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0016451 125.82 By MS/MS 6 0 1 1 54402 54402 0 15635 2576 16507 40033 32018 32018 1 373.98 0 YFEGVSPK YKLLSITVRNAKKIKYFEGVSPKSLKHSPE RNAKKIKYFEGVSPKSLKHSPEDPEKYSCF K Y F P K S 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 8 0 925.45453 P78527 P78527 682 689 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.018484 101.33 By MS/MS 2.5 1.12 1 1 1 1 4 4292000 4292000 0 15636 1225 16508 40034;40035;40036;40037 32019;32020;32021 32020 3 939510 0 YFFFDDGNGLK RGDNPKLLLKDMKTKYFFFDDGNGLKGNRN MKTKYFFFDDGNGLKGNRNVTLTLSWNVVP K Y F L K G 0 0 1 2 0 0 0 2 0 0 1 1 0 3 0 0 0 0 1 0 0 0 11 0 1321.5979 P61009 P61009 127 137 SPCS3 Signal peptidase complex subunit 3 yes yes 2 0.0077445 96.665 By MS/MS 9 0 1 1 124250 124250 0 15637 1103 16509 40038 32022 32022 1 2445.2 0 YFGGCPVIK LVLMSATGDNERFSRYFGGCPVIKVPGFMY NERFSRYFGGCPVIKVPGFMYPVKEHYLED R Y F I K V 0 0 0 0 1 0 0 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 9 0 1039.5161 Q7L2E3 Q7L2E3 602 610 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.011693 97.473 By MS/MS 3 0 1 1 829710 829710 0 15638 1761 16510 40039 32023 32023 1 15181 0 YFGRDPADGR PTALGLEVGQEIQVKYFGRDPADGRMRLSR EIQVKYFGRDPADGRMRLSRKVLQSPATTV K Y F G R M 1 2 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 1 0 0 0 10 1 1152.5312 Q8TCS8 Q8TCS8 735 744 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 3 0.025105 89.029 By MS/MS 5 0 1 1 703380 703380 0 15639 1992 16511 40040 32024 32024 1 7054.5 0 YFLHQSHEER YYFDRDDVALKNFAKYFLHQSHEEREHAEK KNFAKYFLHQSHEEREHAEKLMKLQNQRGG K Y F E R E 0 1 0 0 0 1 2 0 2 0 1 0 0 1 0 1 0 0 1 0 0 0 10 0 1344.6211 P02794 P02794 55 64 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 3 0.045868 70.552 By MS/MS 9.5 0.5 1 1 2 359440 359440 0 15640 461 16512 40041;40042 32025 32025 1 9604.6 0 YFNSYTLTGR GPESDAQYQFTGIKKYFNSYTLTGRMNCVL TGIKKYFNSYTLTGRMNCVLATYGSIALIV K Y F G R M 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 2 0 2 0 0 0 10 0 1220.5826 Q96IX5 Q96IX5 18 27 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2 7.6739E-08 194.94 By MS/MS 10 0 1 1 3849700 3849700 0 15641 2175 16513 40043 32026 32026 1 207480 0 YFPTQALNFAFK GVLSFWRGNLANVIRYFPTQALNFAFKDKY VIRYFPTQALNFAFKDKYKQIFLGGVDKRT R Y F F K D 2 0 1 0 0 1 0 0 0 0 1 1 0 3 1 0 1 0 1 0 0 0 12 0 1445.7343 P05141;Q9H0C2;P12235;P12236 P05141 81 92 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0005155 131.09 By MS/MS 5.78 2.9 1 1 1 1 1 1 1 1 1 9 3358200 3358200 0 15642 487;589;588 16514 40044;40045;40046;40047;40048;40049;40050;40051;40052 32027;32028;32029;32030;32031;32032;32033;32034;32035;32036;32037;32038 32034 12 137920 0 YFQINQDEEEEEDED WLRVVANSKESYELRYFQINQDEEEEEDED YFQINQDEEEEEDED_______________ R Y F E D - 0 0 1 3 0 2 6 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 15 0 1930.7228 P35268 P35268 114 128 RPL22 60S ribosomal protein L22 yes yes 2 8.5005E-56 341.35 By MS/MS 10 0 1 1 774420 774420 0 15643 819 16515 40053 32039 32039 1 41738 0 YFSLPFCVGSK MNTVGPYHNRQETYKYFSLPFCVGSKKSIS ETYKYFSLPFCVGSKKSISHYHETLGEALQ K Y F S K K 0 0 0 0 1 0 0 1 0 0 1 1 0 2 1 2 0 0 1 1 0 0 11 0 1303.6271 Q9HD45 Q9HD45 60 70 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.045638 72.243 By MS/MS 2 0 1 1 70453 70453 0 15644 2519 16516 40054 32040 32040 1 23830 0 YFVEAGAMAVR NVILTTGGIDDMCLKYFVEAGAMAVRRVLK MCLKYFVEAGAMAVRRVLKRDLKRIAKASG K Y F V R R 3 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 2 0 0 11 0 1212.5961 P17987 P17987 299 309 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00012068 149.72 By MS/MS 6 0.707 1 2 1 4 11199000 11199000 0 15645 648 16517;16518 40055;40056;40057;40058 32041;32042 32041 320 2 81163 0 YGALVICETSEQK GAMQSPSLHKLVLGKYGALVICETSEQKTN GKYGALVICETSEQKTNLEDVGRRLGQHVV K Y G Q K T 1 0 0 0 1 1 2 1 0 1 1 1 0 0 0 1 1 0 1 1 0 0 13 0 1496.7181 P43897 P43897 234 246 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.00040241 175.49 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 16563000 16516000 47551 15646 901 16519 40059;40060;40061;40062 32043;32044 32044 2 212810 64167 YGDFFIR DKDMIHIADTKVARRYGDFFIRQIHKFEEL ADTKVARRYGDFFIRQIHKFEELNRTLKKM R Y G I R Q 0 1 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 1 0 0 0 7 0 916.4443 Q9Y262 Q9Y262 539 545 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.043896 94.262 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 31251000 31251000 0 15647 2814 16520 40063;40064;40065;40066;40067;40068;40069;40070;40071;40072 32045;32046;32047;32048;32049 32045 5 536770 0 YGDFQYCEQAK GFATTVDRDGRRSVRYGDFQYCEQAKSVIV RSVRYGDFQYCEQAKSVIVRNTSRQTKPLK R Y G A K S 1 0 0 1 1 2 1 1 0 0 0 1 0 1 0 0 0 0 2 0 0 0 11 0 1407.5765 Q8IWV8 Q8IWV8 274 284 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 2 0.00040648 133.42 By MS/MS 2 0 1 1 304520 304520 0 15648 1870 16521 40073 32050 32050 1 103000 0 YGDFRADDADEFGYSR NAQESAKSARLNLWRYGDFRADDADEFGYS GDFRADDADEFGYSR_______________ R Y G S R - 2 2 0 4 0 0 1 2 0 0 0 0 0 2 0 1 0 0 2 0 0 0 16 1 1882.7758 Q7KZF4 Q7KZF4 895 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.00035263 155.37 By MS/MS 4 0 1 1 1507200 1507200 0 15649 1755 16522 40074 32051 32051 1 141840 0 YGDGIQLTR DCLMRAELIVQPELKYGDGIQLTRSRELDE VQPELKYGDGIQLTRSRELDECFAQANDQM K Y G T R S 0 1 0 1 0 1 0 2 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1021.5193 P15924 P15924 95 103 DSP Desmoplakin yes yes 2 5.7951E-06 191.17 By MS/MS By MS/MS 3.83 2.91 1 1 2 1 1 4 2 4763400 2631800 2131600 15650 628 16523 40075;40076;40077;40078;40079;40080 32052;32053;32054;32055;32056 32052 5 586050 271330 YGDINFDDLNSEQSYNK SAPSRIVVVSSKLYKYGDINFDDLNSEQSY DINFDDLNSEQSYNKSFCYSRSKLANILFT K Y G N K S 0 0 3 3 0 1 1 1 0 1 1 1 0 1 0 2 0 0 2 0 0 0 17 0 2020.865 Q9HBH5 Q9HBH5 197 213 RDH14 Retinol dehydrogenase 14 yes yes 2 3.9474E-45 336.06 By MS/MS 8 0 1 1 943440 943440 0 15651 2505 16524 40081 32057 32057 1 11911 0 YGDIVER FLKYGNREKMAQELKYGDIVERHLIDGDVV EKMAQELKYGDIVERHLIDGDVVLFNRQPS K Y G E R H 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 7 0 850.41848 O14802 O14802 446 452 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.039197 97.798 By MS/MS 3 0 1 1 534290 534290 0 15652 139 16525 40082 32058 32058 1 9776 0 YGEGDSLTLQQLK PAISAASFLQDLIHRYGEGDSLTLQQLKAL HRYGEGDSLTLQQLKALLNHLDVGVGRGNV R Y G L K A 0 0 0 1 0 2 1 2 0 0 3 1 0 0 0 1 1 0 1 0 0 0 13 0 1450.7304 Q15043 Q15043 51 63 SLC39A14 Zinc transporter ZIP14 yes yes 2 1.9865E-11 231.42 By MS/MS 1 0 1 1 190600 190600 0 15653 1480 16526 40083 32059 32059 1 45929 0 YGEGLIFLMMLQK TSSKTLYGLYWYKQKYGEGLIFLMMLQKGG QKYGEGLIFLMMLQKGGEEKSHEKITAKLD K Y G Q K G 0 0 0 0 0 1 1 2 0 1 3 1 2 1 0 0 0 0 1 0 0 0 13 0 1541.7986 A0A0B4J273 A0A0B4J273 59 71 TRAV34 yes yes 2 0.0079194 89.08 By MS/MS 2 0 1 1 0 0 0 15654 3 16527 40084 32060 32060 0;1 1 0 0 YGEICGFSDTNLQK RPSAIGRIPSKYVGRYGEICGFSDTNLQKL RYGEICGFSDTNLQKLYFQLRLNQPYCGYA R Y G Q K L 0 0 1 1 1 1 1 2 0 1 1 1 0 1 0 1 1 0 1 0 0 0 14 0 1630.7297 Q86UT6 Q86UT6 306 319 NLRX1 NLR family member X1 yes yes 2 1.7629E-16 251.81 By MS/MS 4 0 1 1 2577300 2577300 0 15655 1825 16528 40085 32061 32061 1 242540 0 YGEIPAELR ERAIYFDGDFGQIVRYGEIPAELRAAATDH FGQIVRYGEIPAELRAAATDHRQELIECVA R Y G L R A 1 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 1046.5397 Q96RP9 Q96RP9 235 243 GFM1 Elongation factor G, mitochondrial yes yes 2 0.040851 79.906 By MS/MS 5.5 1.12 1 1 1 1 4 17754000 17754000 0 15656 2223 16529 40086;40087;40088;40089 32062 32062 1 213400 0 YGELEPYVYFNK VSYLEPKLQDTIKAKYGELEPYVYFNKGL_ KAKYGELEPYVYFNKGL_____________ K Y G N K G 0 0 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 3 1 0 0 12 0 1520.7187 Q96NB2 Q96NB2 309 320 SFXN2 Sideroflexin-2 yes yes 2 5.7662E-06 185.29 By MS/MS 7.5 0.5 1 1 2 5183700 5183700 0 15657 2202 16530 40090;40091 32063;32064 32064 2 66017 0 YGEPGEVFINK PADITEDEFKRLFAKYGEPGEVFINKGKGF LFAKYGEPGEVFINKGKGFGFIKLESRALA K Y G N K G 0 0 1 0 0 0 2 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 11 0 1251.6136 P23246 P23246 320 330 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0019324 135.43 By MS/MS 4 0 1 1 0 0 0 15658 700 16531 40092 32065 32065 1 0 0 YGEQGLR YEVLSNPEKRELYDRYGEQGLREGSGGGGG EKRELYDRYGEQGLREGSGGGGGMDDIFSH R Y G L R E 0 1 0 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 821.40317 O60884 O60884 69 75 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.030006 128.86 By MS/MS 7 0 1 1 0 0 0 15659 285 16532 40093 32066 32066 1 0 0 YGEYFPGTGDLR AFYTTDRVMTVSFHKYGEYFPGTGDLRDIG FHKYGEYFPGTGDLRDIGAGKGKYYAVNFP K Y G L R D 0 1 0 1 0 0 1 3 0 0 1 0 0 1 1 0 1 0 2 0 0 0 12 0 1373.6252 Q92769;Q13547 Q92769 202 213 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 yes no 2 0.0087759 92.538 By MS/MS 6 0.816 1 1 1 3 12375000 12375000 0 15660 2069 16533 40094;40095;40096 32067 32067 1 96244 0 YGFEPTQEGK KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY DNLEKYGFEPTQEGKLFQLYPRNFLR____ K Y G G K L 0 0 0 0 0 1 2 2 0 0 0 1 0 1 1 0 1 0 1 0 0 0 10 0 1154.5244 Q8IXM3 Q8IXM3 117 126 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.00074222 128.6 By MS/MS By matching 10 0 2 1 1 3487400 3452900 34493 15661 1878 16534 40097;40098 32068 32068 1 186100 44161 YGGDEIPFSPYR AYVPDVTGRYTILIKYGGDEIPFSPYRVRA LIKYGGDEIPFSPYRVRAVPTGDASKCTVT K Y G Y R V 0 1 0 1 0 0 1 2 0 1 0 0 0 1 2 1 0 0 2 0 0 0 12 0 1399.6408 P21333 P21333 1622 1633 FLNA Filamin-A yes yes 2 0.0012726 120.09 By MS/MS 3 1.41 1 1 1 1 1 5 3240200 3240200 0 15662 677 16535 40099;40100;40101;40102;40103 32069;32070;32071 32069 3 768490 0 YGGQPVPNFPSK TYIPLCPGAYTVTIKYGGQPVPNFPSKLQV TIKYGGQPVPNFPSKLQVEPAVDTSGVQCY K Y G S K L 0 0 1 0 0 1 0 2 0 0 0 1 0 1 3 1 0 0 1 1 0 0 12 0 1289.6404 P21333 P21333 1235 1246 FLNA Filamin-A yes yes 2 0.046933 70.942 By MS/MS 1.5 0.5 1 1 2 1218400 1218400 0 15663 677 16536 40104;40105 32072 32072 1 392010 0 YGGSPRDPVLTLR LWSPDQTAEASHVSRYGGSPRDPVLTLRAF SRYGGSPRDPVLTLRAFAGPLSPAKAEDFR R Y G L R A 0 2 0 1 0 0 0 2 0 0 2 0 0 0 2 1 1 0 1 1 0 0 13 1 1429.7678 Q86XL3 Q86XL3 509 521 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.0093838 126.12 By MS/MS 4 0.816 1 1 1 3 5058100 5058100 0 15664 1845 16537 40106;40107;40108 32073;32074;32075 32073 3 391380 0 YGGSTIAAGVVTEIKE ELYKDFKELGRFMLRYGGSTIAAGVVTEIK GGSTIAAGVVTEIKE_______________ R Y G K E - 2 0 0 0 0 0 2 3 0 2 0 1 0 0 0 1 2 0 1 2 0 0 16 1 1593.825 Q9Y450 Q9Y450 669 684 HBS1L HBS1-like protein yes yes 2 0.037342 89.189 By MS/MS 1 0 1 1 87105 87105 0 15665 2887 16538 40109 32076 32076 1 20990 0 YGISSMIQSQEKPDR PREIMDAAEDYAKERYGISSMIQSQEKPDR YGISSMIQSQEKPDRVLVRVRDLTIQKADE R Y G D R V 0 1 0 1 0 2 1 1 0 2 0 1 1 0 1 3 0 0 1 0 0 0 15 1 1737.8356 P14868 P14868 29 43 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.014592 81.789 By MS/MS 6 0 2 2 5693700 5693700 0 15666 620 16539;16540 40110;40111 32077;32078 32077 293 1 39140 0 YGLECLFR EFKQLALEDAKEGYRYGLECLFRYYSYGLE DAKEGYRYGLECLFRYYSYGLEKKFRLDIF R Y G F R Y 0 1 0 0 1 0 1 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1056.5063 Q6PKG0;Q659C4 Q6PKG0 949 956 LARP1;LARP1B La-related protein 1;La-related protein 1B yes no 2 0.0053896 123.69 By MS/MS 4 0.816 1 1 1 3 192440 192440 0 15667 1722 16541 40112;40113;40114 32079;32080 32079 2 9872.3 0 YGLIGLNGIGK ELLSDTKLELNSGRRYGLIGLNGIGKSMLL SGRRYGLIGLNGIGKSMLLSAIGKREVPIP R Y G G K S 0 0 1 0 0 0 0 4 0 2 2 1 0 0 0 0 0 0 1 0 0 0 11 0 1103.6339 Q9UG63 Q9UG63 114 124 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0012677 116.25 By MS/MS 5 0 1 1 992210 992210 0 15668 2719 16542 40115 32081 32081 1 9951.4 0 YGLKPPTL SLCDAAHAQTEVAKKYGLKPPTL_______ QTEVAKKYGLKPPTL_______________ K Y G T L - 0 0 0 0 0 0 0 1 0 0 2 1 0 0 2 0 1 0 1 0 0 0 8 1 887.51165 O94826 O94826 601 608 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.015577 134.06 By MS/MS 5 0 1 1 1952400 1952400 0 15669 369 16543 40116 32082 32082 1 19582 0 YGLNMCR RSCRVCSNRHGLIRKYGLNMCRQCFRQYAK NRHGLIRKYGLNMCRQCFRQYAKDIGFIKL K Y G C R Q 0 1 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 7 0 912.39459 P62273 P62273 34 40 RPS29 40S ribosomal protein S29 yes yes 2 0.009438 137.44 By MS/MS 10 0 2 2 3257900 3257900 0 15670 1150 16544;16545 40117;40118 32083;32084 32084 654 2 175590 0 YGMGTSVER ALWKLPCIFICENNRYGMGTSVERAAASTD ICENNRYGMGTSVERAAASTDYYKRGDFIP R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.023268 87.181 By MS/MS By matching 7 0 2 1 1 1419000 1349100 69878 15671 524 16546 40119;40120 32085 32085 228 1 21179 125850 YGNQLVR QEFYQDDELGKKQFKYGNQLVRLAHREQVA ELGKKQFKYGNQLVRLAHREQVALYVDLDD K Y G V R L 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 848.45045 P33993 P33993 33 39 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.0054759 153.61 By MS/MS 4.5 0.5 1 1 2 2762600 2762600 0 15672 808 16547 40121;40122 32086;32087 32087 2 130950 0 YGPEGEAVPVAIPEER PPKPPAWAWAEGWTRYGPEGEAVPVAIPEE GPEGEAVPVAIPEERALVFDVEVCLAEGTC R Y G E R A 2 1 0 0 0 0 4 2 0 1 0 0 0 0 3 0 0 0 1 2 0 0 16 0 1711.8417 P54098 P54098 178 193 POLG DNA polymerase subunit gamma-1 yes yes 2 0.00037044 142.76 By MS/MS 3.5 0.5 1 1 2 554750 554750 0 15673 1041 16548 40123;40124 32088 32088 1 31018 0 YGPFVADFADK TALSVLGVMVYGIKKYGPFVADFADKLNEQ GIKKYGPFVADFADKLNEQKLAQLEEAKQA K Y G D K L 2 0 0 2 0 0 0 1 0 0 0 1 0 2 1 0 0 0 1 1 0 0 11 0 1228.5764 P24539 P24539 116 126 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 8.7579E-05 152.97 By MS/MS 8.5 0.5 1 1 2 8163600 8163600 0 15674 714 16549 40125;40126 32089;32090 32090 2 121170 0 YGPFVADFADKLNEQK TALSVLGVMVYGIKKYGPFVADFADKLNEQ GPFVADFADKLNEQKLAQLEEAKQASIQHI K Y G Q K L 2 0 1 2 0 1 1 1 0 0 1 2 0 2 1 0 0 0 1 1 0 0 16 1 1840.8996 P24539 P24539 116 131 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 3 0.017985 76.868 By MS/MS 8.5 0.5 1 1 2 996550 996550 0 15675 714 16550 40127;40128 32091 32091 1 13852 0 YGQGAGEGSTR PRGDPGLGERDWTSKYGQGAGEGSTREWAS WTSKYGQGAGEGSTREWASRCGIGQEEMEA K Y G T R E 1 1 0 0 0 1 1 4 0 0 0 0 0 0 0 1 1 0 1 0 0 0 11 0 1081.4789 Q9C0C2 Q9C0C2 778 788 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0081919 95.483 By MS/MS 2 0 1 1 144210 144210 0 15676 2390 16551 40129 32092 32092 1 48778 0 YGQHGSGSR SRGERHRSSSGSSSSYGQHGSGSRQSLGHG SGSSSSYGQHGSGSRQSLGHGRQGSGSRQS S Y G S R Q 0 1 0 0 0 1 0 3 1 0 0 0 0 0 0 2 0 0 1 0 0 0 9 0 947.42094 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 283 291 HRNR Hornerin yes no 2 0.0015712 120.31 By MS/MS By MS/MS 5.43 2.82 2 2 2 3 2 2 2 2 2 2 10 11 6858800 2918100 3940700 + 15677 73 16552 40130;40131;40132;40133;40134;40135;40136;40137;40138;40139;40140;40141;40142;40143;40144;40145;40146;40147;40148;40149;40150 32093;32094;32095;32096;32097;32098;32099;32100;32101;32102;32103;32104;32105;32106;32107;32108;32109 32096 17 259490 3988600 YGQLSEK EKTKAVENYLIQMARYGQLSEKVSEQGLIE NYLIQMARYGQLSEKVSEQGLIEILKKVSQ R Y G E K V 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 7 0 823.40758 O14737 O14737 80 86 PDCD5 Programmed cell death protein 5 yes yes 2 0.010617 133.81 By MS/MS By matching 9.5 0.5 1 1 1 1 1136600 1054800 81791 15678 136 16553 40151;40152 32110 32110 1 56852 186510 YGQNGDFTR SGGVSVPALWSEVNRYGQNGDFTRALKTVN WSEVNRYGQNGDFTRALKTVNKILQINKDD R Y G T R A 0 1 1 1 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 9 0 1056.4625 O76094 O76094 21 29 SRP72 Signal recognition particle subunit SRP72 yes yes 2 4.05E-05 173.39 By MS/MS 5.5 0.5 1 1 2 1591300 1591300 0 15679 362 16554 40153;40154 32111 32111 1 15204 0 YGQQGSGSGQSPSR SSHGQHGSGSSQSSRYGQQGSGSGQSPSRG RYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ R Y G S R G 0 1 0 0 0 3 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 14 0 1394.6175 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 649 662 HRNR Hornerin yes no 2 6.8497E-29 256.95 By MS/MS By MS/MS 5.5 3 2 1 2 2 1 2 1 1 2 2 6 10 11266000 2903600 8362300 + 15680 73 16555 40155;40156;40157;40158;40159;40160;40161;40162;40163;40164;40165;40166;40167;40168;40169;40170 32112;32113;32114;32115;32116;32117;32118;32119;32120;32121;32122;32123;32124;32125;32126;32127 32114 16 169680 5305500 YGSGGGSKGGSISGGGYGSGGGK ISGGGYGSGGGSGGRYGSGGGSKGGSISGG GGSISGGGYGSGGGKHSSGGGSRGGSSSGG R Y G G K H 0 0 0 0 0 0 0 13 0 1 0 2 0 0 0 5 0 0 2 0 0 0 23 1 1889.8504 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 573 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 3.3533E-24 224.99 By MS/MS By MS/MS 4.56 2.76 2 3 2 2 1 2 1 1 1 1 2 14 11083000 1157500 9925100 + 15681 55 16556 40171;40172;40173;40174;40175;40176;40177;40178;40179;40180;40181;40182;40183;40184;40185;40186 32128;32129;32130;32131;32132;32133;32134;32135;32136;32137;32138;32139;32140;32141;32142 32132 15 7957.1 6559200 YGSGGGSKGGSISGGGYGSGGGKHSSGGGSR ISGGGYGSGGGSGGRYGSGGGSKGGSISGG YGSGGGKHSSGGGSRGGSSSGGGYGSGGGG R Y G S R G 0 1 0 0 0 0 0 16 1 1 0 2 0 0 0 8 0 0 2 0 0 0 31 2 2615.1709 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 573 603 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4;5 1.8607E-06 86.604 By MS/MS By MS/MS 3 1.91 2 1 1 1 1 3 3 1640100 809250 830860 + 15682 55 16557 40187;40188;40189;40190;40191;40192 32143;32144;32145;32146;32147 32143 5 74146 538200 YGSRPVWADYR DEPWKYLESEEYQERYGSRPVWADYRRNHK YQERYGSRPVWADYRRNHKGGVPPQRTRKT R Y G Y R R 1 2 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 1 2 1 0 0 11 1 1368.6575 Q9Y676 Q9Y676 68 78 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 0.026874 73.9 By MS/MS 8 0 1 1 2760400 2760400 0 15683 2932 16558 40193 32148 32148 1 34850 0 YGTCIYQGR DCYCRIPACIAGERRYGTCIYQGRLWAFCC IAGERRYGTCIYQGRLWAFCC_________ R Y G G R L 0 1 0 0 1 1 0 2 0 1 0 0 0 0 0 0 1 0 2 0 0 0 9 0 1116.5022 P59666;P59665 P59666 80 88 DEFA3;DEFA1 Neutrophil defensin 3;HP 3-56;Neutrophil defensin 2;Neutrophil defensin 1;HP 1-56;Neutrophil defensin 2 yes no 2 0.0024724 133.23 By matching By MS/MS 3.5 3.77 2 1 1 2 2 4926400 187040 4739300 15684 1087 16559 40194;40195;40196;40197 32149;32150 32149 2 53992 4865200 YGTDLSR SMDDHKLSLDELHRKYGTDLSRGLTSARAA SLDELHRKYGTDLSRGLTSARAAEILARDG K Y G S R G 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 7 0 810.38718 P05023 P05023 55 61 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.047033 91.9 By MS/MS 1 0 1 1 1718500 1718500 0 15685 481 16560 40198 32151 32151 1 414090 0 YGVGTCGPR DNPRVKAAALASLKKYGVGTCGPRGFYGTF LASLKKYGVGTCGPRGFYGTFDVHLDLEDR K Y G P R G 0 1 0 0 1 0 0 3 0 0 0 0 0 0 1 0 1 0 1 1 0 0 9 0 965.4389 O15269 O15269 128 136 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.014542 92.47 By MS/MS 6.5 0.5 1 1 2 11641000 11641000 0 15686 177 16561 40199;40200 32152 32152 1 82633 0 YGVIILDEAHER GMLLREAMNDPLLERYGVIILDEAHERTLA LERYGVIILDEAHERTLATDILMGVLKEVV R Y G E R T 1 1 0 1 0 0 2 1 1 2 1 0 0 0 0 0 0 0 1 1 0 0 12 0 1413.7252 O43143 O43143 254 265 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 3 0.050374 100.69 By MS/MS 4.5 0.5 1 1 2 1385300 1385300 0 15687 190 16562 40201;40202 32153 32153 1 105460 0 YGVIIVGNPK LNDPRRLNVALTRARYGVIIVGNPKALSKQ LTRARYGVIIVGNPKALSKQPLWNHLLNYY R Y G P K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 1 0 0 0 1 2 0 0 10 0 1058.6124 Q92900 Q92900 879 888 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00016053 151.29 By MS/MS 3.5 0.5 1 1 2 913040 913040 0 15688 2077 16563 40203;40204 32154 32154 1 37918 0 YGVMDTTTAQGR HTNLSVNAITADGSRYGVMDTTTAQGRSPV GSRYGVMDTTTAQGRSPVEVAQDVLAAVGK R Y G G R S 1 1 0 1 0 1 0 2 0 0 0 0 1 0 0 0 3 0 1 1 0 0 12 0 1298.5925 Q6IAN0 Q6IAN0 256 267 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 1.4265E-08 210.64 By MS/MS 8 0 1 1 448710 448710 0 15689 1681 16564 40205 32155 32155 1 5664.9 0 YGVNPGPIVGTTR VTELTNEDLLDQLVKYGVNPGPIVGTTRKL VKYGVNPGPIVGTTRKLYEKKLLKLREQGT K Y G T R K 0 1 1 0 0 0 0 3 0 1 0 0 0 0 2 0 2 0 1 2 0 0 13 0 1329.7041 P42166;P42167 P42166 127 139 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0010157 113.67 By MS/MS By matching 6 0.707 1 2 1 3 1 16343000 16230000 113170 15690 875;876 16565 40206;40207;40208;40209 32156;32157;32158 32158 3 136880 115970 YGYTDIDLLSAAK CGQESTRRIGDYKVKYGYTDIDLLSAAKSK VKYGYTDIDLLSAAKSKPIIAEPEIHGAQP K Y G A K S 2 0 0 2 0 0 0 1 0 1 2 1 0 0 0 1 1 0 2 0 0 0 13 0 1428.7137 Q15750 Q15750 250 262 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 1.2915E-06 202.56 By MS/MS 6 0 1 1 3179100 3179100 0 15691 1528 16566 40210 32159 32159 1 21854 0 YHAASAEEQATIER MIQTLEAVKRKQFEKYHAASAEEQATIERN KYHAASAEEQATIERNPYTIFHQALKNCEP K Y H E R N 4 1 0 0 0 1 3 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1574.7325 Q9Y2R9 Q9Y2R9 126 139 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2;3 1.9255E-16 294.49 By MS/MS 8.5 0.5 2 2 4 7425900 7425900 0 15692 2841 16567 40211;40212;40213;40214 32160;32161 32161 2 96553 0 YHDEADQSALQR KKKGEFPGEKSKRLRYHDEADQSALQRMTR RLRYHDEADQSALQRMTRLRVTWSMQEDGL R Y H Q R M 2 1 0 2 0 2 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 12 0 1431.6379 Q12789 Q12789 1246 1257 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2;3 7.0858E-05 160.91 By MS/MS 2 0 2 2 539410 539410 0 15693 1328 16568 40215;40216 32162;32163 32162 2 182450 0 YHGNVMLLR YYKLRAAEQYTPKAKYHGNVMLLRAKTGGA YTPKAKYHGNVMLLRAKTGGAYGEDLGADY K Y H L R A 0 1 1 0 0 0 0 1 1 0 2 0 1 0 0 0 0 0 1 1 0 0 9 0 1101.5753 P49327 P49327 2439 2447 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.048087 76.774 By MS/MS 2 0 1 1 429240 429240 0 15694 946 16569 40217 32164 32164 1 145190 0 YHPDKNPNEGEK TQEELKKAYRKLALKYHPDKNPNEGEKFKQ ALKYHPDKNPNEGEKFKQISQAYEVLSDAK K Y H E K F 0 0 2 1 0 0 2 1 1 0 0 2 0 0 2 0 0 0 1 0 0 0 12 1 1426.6477 P31689 P31689 33 44 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.00093682 149.94 By MS/MS 7.57 1.4 2 2 1 1 1 7 13266000 13266000 0 15695 787 16570 40218;40219;40220;40221;40222;40223;40224 32165;32166;32167;32168 32166 4 134710 0 YHSDEYIK EIYRPHKATAEEMTKYHSDEYIKFLRSIRP TAEEMTKYHSDEYIKFLRSIRPDNMSEYSK K Y H I K F 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 1 0 0 2 0 0 0 8 0 1053.4767 Q92769 Q92769 68 75 HDAC2 Histone deacetylase 2 yes yes 2 0.053375 81.191 By MS/MS 6.5 0.5 1 1 2 3414700 3414700 0 15696 2069 16571 40225;40226 32169 32169 1 25326 0 YHTEIVFAR DLKDMTSEQLDDILKYHTEIVFARTSPQQK LDDILKYHTEIVFARTSPQQKLIIVEGCQR K Y H A R T 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 9 0 1134.5822 P05023 P05023 684 692 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0026023 119.41 By MS/MS 3 1 1 1 2 1922200 1922200 0 15697 481 16572 40227;40228 32170;32171 32170 2 399290 0 YHTSQSGDEMTSLSEYVSR HEDSTNRRRLSELLRYHTSQSGDEMTSLSE QSGDEMTSLSEYVSRMKETQKSIYYITGES R Y H S R M 0 1 0 1 0 1 2 1 1 0 1 0 1 0 0 5 2 0 2 1 0 0 19 0 2175.9379 P08238 P08238 457 475 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 5.7638E-34 302.15 By MS/MS 4.4 0.49 3 2 5 17813000 17813000 0 15698 521 16573;16574 40229;40230;40231;40232;40233 32172;32173;32174;32175 32173 222 4 1452000 0 YHVKDSSR LLAGSEYLKLGYVSRYHVKDSSRHVILGTQ KLGYVSRYHVKDSSRHVILGTQQFKPNEFA R Y H S R H 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 1 1 0 0 8 1 990.48829 O15371 O15371 455 462 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.035372 115.49 By MS/MS 5 0 1 1 1477800 1477800 0 15699 185 16575 40234 32176 32176 1 14821 0 YIANTVELR SGYYDFLVEVEGDNRYIANTVELRVKISTE VEGDNRYIANTVELRVKISTEVGITNVDLS R Y I L R V 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 1 1 0 0 9 0 1077.5819 P04844 P04844 358 366 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.0014431 128.38 By MS/MS 1.5 0.5 1 1 2 994530 994530 0 15700 479 16576 40235;40236 32177;32178 32177 2 285400 0 YIASVQGSTPSPR ______________________________ ERYIASVQGSTPSPRQKSMKGFYFAKLYYE R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0025668 110.84 By MS/MS 1.5 0.5 1 1 2 115640 115640 0 15701 964 16577 40237;40238 32179 32179 1 35452 0 YICDNQDTISSK GDLLECADDRADLAKYICDNQDTISSKLKE LAKYICDNQDTISSKLKECCDKPLLEKSHC K Y I S K L 0 0 1 2 1 1 0 0 0 2 0 1 0 0 0 2 1 0 1 0 0 0 12 0 1442.6348 CON__P02769 CON__P02769 286 297 yes yes 2 1.3474E-06 199.19 By MS/MS 6.5 1.12 1 1 1 1 4 5040200 5040200 0 + 15702 43 16578 40239;40240;40241;40242 32180;32181 32180 2 45149 0 YICENQDSISSK GDLLECADDRADLAKYICENQDSISSKLKE LAKYICENQDSISSKLKECCEKPLLEKSHC K Y I S K L 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 3 0 0 1 0 0 0 12 0 1442.6348 CON__P02768-1;P02768 CON__P02768-1 287 298 ALB Serum albumin yes no 2 2.0949E-05 169.52 By matching By MS/MS 3.88 2.89 2 2 1 1 1 1 2 6 820900 106480 714430 + 15703 42 16579 40243;40244;40245;40246;40247;40248;40249;40250 32182;32183;32184;32185;32186;32187;32188 32182 7 32459 848130 YIDQEELNK SGKDKKKKTKKIKEKYIDQEELNKTKPIWT KKIKEKYIDQEELNKTKPIWTRNPDDITQE K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P07900;Q14568;P08238;Q58FF8 P08238 276 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 6.9084E-07 186.76 By MS/MS By MS/MS 4.5 1.5 1 1 2 2 1 1 6 2 88921000 88501000 420130 15704 521;513 16580 40251;40252;40253;40254;40255;40256;40257;40258 32189;32190;32191;32192;32193;32194;32195 32194 7 7251200 794160 YIDSADLEPITSQEEPVR LEHSALAINHKLEIKYIDSADLEPITSQEE SADLEPITSQEEPVRYHEAWQKLCSAHGVL K Y I V R Y 1 1 0 2 0 1 3 0 0 2 1 0 0 0 2 2 1 0 1 1 0 0 18 0 2060.9902 P17812 P17812 336 353 CTPS1 CTP synthase 1 yes yes 2 7.7475E-05 241.76 By MS/MS 5 0 1 1 941820 941820 0 15705 645 16581 40259 32196 32196 1 9446 0 YIEDKDVFQK AELEDTLNQVMVVFKYIEDKDVFQKFYAKM MVVFKYIEDKDVFQKFYAKMLAKRLVHQNS K Y I Q K F 0 0 0 2 0 1 1 0 0 1 0 2 0 1 0 0 0 0 1 1 0 0 10 1 1283.6398 Q13616 Q13616 455 464 CUL1 Cullin-1 yes yes 2;3 0.0014986 140.11 By MS/MS 4.33 0.471 2 1 3 3577600 3577600 0 15706 1402 16582 40260;40261;40262 32197;32198 32197 2 323000 0 YIEIFPSR ANQALLKHREEIGNRYIEIFPSRRNEVRTH REEIGNRYIEIFPSRRNEVRTHVGSYKGKK R Y I S R R 0 1 0 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 0 8 0 1023.5389 Q12849 Q12849 318 325 GRSF1 G-rich sequence factor 1 yes yes 2 0.028533 90.657 By MS/MS 6 0 1 1 962710 962710 0 15707 1334 16583 40263 32199 32199 1 6617.9 0 YIEIYVQK VHDLVLYLYRNNLQKYIEIYVQKVNPSRLP YRNNLQKYIEIYVQKVNPSRLPVVIGGLLD K Y I Q K V 0 0 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 8 0 1054.5699 Q00610;P53675 Q00610 799 806 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.021009 98.523 By MS/MS 3.5 0.5 1 1 2 620280 620280 0 15708 1262 16584 40264;40265 32200 32200 1 32735 0 YIELFLNSCPK AVAAMLKDRSHVHHRYIELFLNSCPKGK__ VHHRYIELFLNSCPKGK_____________ R Y I P K G 0 0 1 0 1 0 1 0 0 1 2 1 0 1 1 1 0 0 1 0 0 0 11 0 1382.6904 Q12849 Q12849 468 478 GRSF1 G-rich sequence factor 1 yes yes 2 5.9733E-10 223.31 By MS/MS 6 0 1 1 1057000 1057000 0 15709 1334 16585 40266 32201 32201 1 7265.7 0 YIELLTR PSGVILQEAADVHARYIELLTRSGDYYRFL EAADVHARYIELLTRSGDYYRFLSEMLKSL R Y I T R S 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 1 0 1 0 0 0 7 0 906.51747 P15924 P15924 1003 1009 DSP Desmoplakin yes yes 2 0.016203 125.25 By MS/MS By matching 2.88 1.36 2 1 2 2 1 7 1 4408100 4278100 130000 15710 628 16586 40267;40268;40269;40270;40271;40272;40273;40274 32202;32203;32204;32205;32206 32206 5 761620 130000 YIESPVLFLR SIIRHRESTPKVVSKYIESPVLFLREDVGK KVVSKYIESPVLFLREDVGKVKFDIRYIVL K Y I L R E 0 1 0 0 0 0 1 0 0 1 2 0 0 1 1 1 0 0 1 1 0 0 10 0 1235.6914 Q14166 Q14166 452 461 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 2 0.00050267 133.23 By MS/MS 5 0 1 1 252290 252290 0 15711 1427 16587 40275 32207 32207 1 2530.4 0 YIETSELCGGAR KFATEYCNTIEGTAKYIETSELCGGARICY TAKYIETSELCGGARICYIFHETFGRTLES K Y I A R I 1 1 0 0 1 0 2 2 0 1 1 0 0 0 0 1 1 0 1 0 0 0 12 0 1354.6187 O00429 O00429 354 365 DNM1L Dynamin-1-like protein yes yes 2 3.824E-06 191.4 By MS/MS 5 0 1 1 1894200 1894200 0 15712 105 16588 40276 32208 32208 1 18998 0 YIFDAECALEK EYSDKSLYTQLCFYRYIFDAECALEKLTTD CFYRYIFDAECALEKLTTDHEKDKLKKQFF R Y I E K L 2 0 0 1 1 0 2 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 11 0 1357.6224 P09884 P09884 1397 1407 POLA1 DNA polymerase alpha catalytic subunit yes yes 2 0.00020342 142.83 By MS/MS 2 0 1 1 173160 173160 0 15713 544 16589 40277 32209 32209 1 58569 0 YIHSANVLHR DHICYFLYQILRGLKYIHSANVLHRDLKPS LRGLKYIHSANVLHRDLKPSNLLINTTCDL K Y I H R D 1 1 1 0 0 0 0 0 2 1 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1208.6414 P27361;P28482;P31152;Q16659 P27361 156 165 MAPK3;MAPK1;MAPK4;MAPK6 Mitogen-activated protein kinase 3;Mitogen-activated protein kinase 1;Mitogen-activated protein kinase 4;Mitogen-activated protein kinase 6 yes no 3 0.0071645 97.965 By MS/MS 7 0 1 1 333190 333190 0 15714 740 16590 40278 32210 32210 1 5230.5 0 YIIEELNVR HQDPEALKDIKSLEKYIIEELNVRKVTLST IKSLEKYIIEELNVRKVTLSTDKNKYGIRL K Y I V R K 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1147.6237 P41252 P41252 869 877 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00058524 144.09 By MS/MS By MS/MS 4.25 1.3 2 1 1 3 1 5626400 5500000 126430 15715 871 16591 40279;40280;40281;40282 32211;32212;32213;32214 32213 4 77184 16093 YIIEELNVRK HQDPEALKDIKSLEKYIIEELNVRKVTLST KSLEKYIIEELNVRKVTLSTDKNKYGIRLR K Y I R K V 0 1 1 0 0 0 2 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 10 1 1275.7187 P41252 P41252 869 878 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00064234 131.22 By MS/MS 3 0 1 1 0 0 0 15716 871 16592 40283 32215 32215 1 0 0 YIIIGDTGVGK ______________________________ YLFKYIIIGDTGVGKSCLLLQFTDKRFQPV K Y I G K S 0 0 0 1 0 0 0 3 0 3 0 1 0 0 0 0 1 0 1 1 0 0 11 0 1134.6285 P61019;Q8WUD1 P61019 9 19 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 0.00050258 131.5 By MS/MS 9 0 1 1 954240 954240 0 15717 1105 16593 40284 32216 32216 1 18780 0 YILEIENVR CYEILGEFSGEIKKKYILEIENVREVQRAG GEIKKKYILEIENVREVQRAGILFFRIMLL K Y I V R E 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1147.6237 A4FU69 A4FU69 1310 1318 EFCAB5 EF-hand calcium-binding domain-containing protein 5 yes yes 2 0.0022215 118.5 By MS/MS 4 0 1 1 1497800 1497800 0 15718 18 16594 40285 32217 32217 1 140950 0 YINENLIVNTDELGR SVISGYRLACKEAVRYINENLIVNTDELGR YINENLIVNTDELGRDCLINAAKTSMSSKI R Y I G R D 0 1 3 1 0 0 2 1 0 2 2 0 0 0 0 0 1 0 1 1 0 0 15 0 1761.8897 P17987 P17987 131 145 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.8798E-17 269.14 By MS/MS 4 2.16 1 1 1 3 20890000 20890000 0 15719 648 16595 40286;40287;40288 32218;32219;32220 32220 3 212210 0 YINENLIVNTDELGRDCLINAAK SVISGYRLACKEAVRYINENLIVNTDELGR NTDELGRDCLINAAKTSMSSKIIGINGDFF R Y I A K T 2 1 4 2 1 0 2 1 0 3 3 1 0 0 0 0 1 0 1 1 0 0 23 1 2647.3276 P17987 P17987 131 153 TCP1 T-complex protein 1 subunit alpha yes yes 3 1.51E-05 110.77 By MS/MS 6 0 1 1 2682000 2682000 0 15720 648 16596 40289 32221 32221 1 18437 0 YINVGDLAR KTTLGKELASKSGLKYINVGDLAREEQLYD SKSGLKYINVGDLAREEQLYDGYDEEYDCP K Y I A R E 1 1 1 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1019.54 Q9Y3D8 Q9Y3D8 31 39 AK6 Adenylate kinase isoenzyme 6 yes yes 2 0.002079 120.31 By MS/MS 8.5 0.5 1 1 2 844560 844560 0 15721 2874 16597 40290;40291 32222 32222 1 13814 0 YIQAACK GSIVNFSQDPDVHFKYIQAACKTGQIKEVE QDPDVHFKYIQAACKTGQIKEVERICRESN K Y I C K T 2 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 852.41637 Q00610;P53675 Q00610 731 737 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.03081 104.11 By MS/MS 1 0 1 1 263480 263480 0 15722 1262 16598 40292 32223 32223 1 63491 0 YIQAEPPTNK QFDNVRLWLGKNYKKYIQAEPPTNKSLSSL KNYKKYIQAEPPTNKSLSSLVVQLLQFQEE K Y I N K S 1 0 1 0 0 1 1 0 0 1 0 1 0 0 2 0 1 0 1 0 0 0 10 0 1159.5873 Q8TAQ2 Q8TAQ2 38 47 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 2 0.031347 81.338 By MS/MS 3 0 1 1 252150 252150 0 15723 1976 16599 40293 32224 32224 1 4613.6 0 YISAAPGAEAK SSSLNLGGLTNGSGRYISAAPGAEAKYRSA GSGRYISAAPGAEAKYRSASSASSLFSPSS R Y I A K Y 4 0 0 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 1 0 0 0 11 0 1076.5502 Q14671;Q8TB72 Q14671 784 794 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 yes no 2 0.0099326 90.906 By MS/MS 4.5 1.12 1 1 1 1 4 5528900 5528900 0 15724 1448 16600 40294;40295;40296;40297 32225 32225 1 148320 0 YISCVFAEESDLSR VKGFMEDEGRQRTTKYISCVFAEESDLSRQ KYISCVFAEESDLSRQYQREKARSELLTTV K Y I S R Q 1 1 0 1 1 0 2 0 0 1 1 0 0 1 0 3 0 0 1 1 0 0 14 0 1674.7559 Q12789 Q12789 428 441 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00011225 178.71 By MS/MS 2 0 1 1 193160 193160 0 15725 1328 16601 40298 32226 32226 1 65335 0 YISPDQLADLYK GKYDLDFKSPDDPSRYISPDQLADLYKSFI PSRYISPDQLADLYKSFIKDYPVVSIEDPF R Y I Y K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 1 1 0 0 2 0 0 0 12 0 1424.7187 P06733 P06733 270 281 ENO1 Alpha-enolase yes yes 2 0.0013439 123.01 By MS/MS 6.5 0.5 1 1 2 9981200 9981200 0 15726 500 16602 40299;40300 32227;32228 32227 2 72347 0 YIVIEPTR QFEYELEQALEAQYKYIVIEPTRIGDETAR ALEAQYKYIVIEPTRIGDETARWITVGNCL K Y I T R I 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 1 1 0 0 8 0 989.55458 P17152 P17152 59 66 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.026489 92.439 By MS/MS 9.5 0.5 1 1 2 3880800 3880800 0 15727 640 16603 40301;40302 32229 32229 1 79720 0 YIVIEPTRIGDETAR QFEYELEQALEAQYKYIVIEPTRIGDETAR YIVIEPTRIGDETARWITVGNCLHKTAVLA K Y I A R W 1 2 0 1 0 0 2 1 0 3 0 0 0 0 1 0 2 0 1 1 0 0 15 1 1731.9155 P17152 P17152 59 73 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.017404 107.97 By MS/MS 9 0 1 1 240400 240400 0 15728 640 16604 40303 32230 32230 1 4731.2 0 YIVLAKDFEK SICQESGMLAVRENRYIVLAKDFEKAYKTV VRENRYIVLAKDFEKAYKTVIKKDEQEHEF R Y I E K A 1 0 0 1 0 0 1 0 0 1 1 2 0 1 0 0 0 0 1 1 0 0 10 1 1224.6754 P43686 P43686 392 401 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.025564 105.2 By MS/MS 6 0 1 1 6083900 6083900 0 15729 900 16605 40304 32231 32231 1 41822 0 YIYDSAFHPDTGEK IVPPGLTENELWRAKYIYDSAFHPDTGEKM KYIYDSAFHPDTGEKMILIGRMSAQVPMNM K Y I E K M 1 0 0 2 0 0 1 1 1 1 0 1 0 1 1 1 1 0 2 0 0 0 14 0 1641.7311 Q9H9B4 Q9H9B4 73 86 SFXN1 Sideroflexin-1 yes yes 2 4.1255E-08 223.77 By MS/MS 7.5 0.5 1 1 2 6082700 6082700 0 15730 2485 16606 40305;40306 32232 32232 1 77376 0 YKAEDEVQR LSKEEIERMVQEAEKYKAEDEVQRERVSAK VQEAEKYKAEDEVQRERVSAKNALESYAFN K Y K Q R E 1 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1136.5462 P0DMV9;P0DMV8 P0DMV9 525 533 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.003879 137.95 By MS/MS By matching 5 0 2 1 1 3719600 3682800 36808 15731 550 16607 40307;40308 32233 32233 1 36936 30911 YKAEDEVQRER LSKEEIERMVQEAEKYKAEDEVQRERVSAK EAEKYKAEDEVQRERVSAKNALESYAFNMK K Y K E R V 1 2 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 11 2 1421.6899 P0DMV9;P0DMV8 P0DMV9 525 535 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 6.7558E-05 158.47 By MS/MS By matching 5.25 0.433 3 1 3 1 7879800 7820800 59036 15732 550 16608 40309;40310;40311;40312 32234;32235 32235 2 76751 49578 YKDAIHFYNK KAYARIGNSYFKEEKYKDAIHFYNKSLAEH FKEEKYKDAIHFYNKSLAEHRTPDVLKKCQ K Y K N K S 1 0 1 1 0 0 0 0 1 1 0 2 0 1 0 0 0 0 2 0 0 0 10 1 1297.6455 P31948 P31948 316 325 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.028086 117.53 By MS/MS 5.5 0.5 1 1 2 4275100 4275100 0 15733 795 16609 40313;40314 32236 32236 1 38704 0 YKDQTGGYTR EKDLIPKLFQVLAPRYKDQTGGYTRMLQIP VLAPRYKDQTGGYTRMLQIPNRSLDRAKMA R Y K T R M 0 1 0 1 0 1 0 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 10 1 1187.5571 Q9NRX2 Q9NRX2 97 106 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2;3 3.4108E-05 176.48 By MS/MS 9.33 0.471 2 1 3 6613600 6613600 0 15734 2561 16610 40315;40316;40317 32237;32238 32237 2 133330 0 YKEAEPLCKR ATLNNLAVLYGKRGKYKEAEPLCKRALEIR GKRGKYKEAEPLCKRALEIREKVLGKFHPD K Y K K R A 1 1 0 0 1 0 2 0 0 0 1 2 0 0 1 0 0 0 1 0 0 0 10 2 1292.6547 Q07866;Q9H0B6 Q9H0B6 298 307 KLC1;KLC2 Kinesin light chain 1;Kinesin light chain 2 no no 3 0.031656 86.014 By MS/MS 5 0 1 1 1099700 1099700 0 15735 2405;1303 16611 40318 32239 32239 1 11030 0 YKEEFEKNK NLRLKQQSELQSQVRYKEEFEKNKGKGFSV LQSQVRYKEEFEKNKGKGFSVVADTPELQR R Y K N K G 0 0 1 0 0 0 3 0 0 0 0 3 0 1 0 0 0 0 1 0 0 0 9 2 1213.5979 Q14847 Q14847 86 94 LASP1 LIM and SH3 domain protein 1 yes yes 3 0.011464 94.409 By MS/MS 7 0 1 1 833110 833110 0 15736 1460 16612 40319 32240 32240 1 13078 0 YKEETIEK ERKAKSRQVGKEKGKYKEETIEKMQE____ VGKEKGKYKEETIEKMQE____________ K Y K E K M 0 0 0 0 0 0 3 0 0 1 0 2 0 0 0 0 1 0 1 0 0 0 8 1 1038.5233 P61254 P61254 135 142 RPL26 60S ribosomal protein L26 yes yes 2;3 0.0051339 145.16 By MS/MS By matching 9 0 3 2 1 7830400 7741400 88994 15737 1119 16613 40320;40321;40322 32241;32242 32242 2 152350 202930 YKEETIEKMQE ERKAKSRQVGKEKGKYKEETIEKMQE____ EKGKYKEETIEKMQE_______________ K Y K Q E - 0 0 0 0 0 1 4 0 0 1 0 2 1 0 0 0 1 0 1 0 0 0 11 2 1426.665 P61254 P61254 135 145 RPL26 60S ribosomal protein L26 yes yes 2 8.9965E-09 220.82 By MS/MS 9 0 1 1 401110 401110 0 15738 1119 16614 40323 32243 32243 1 7893.8 0 YKHPSEEELR CSFARWLLCNGSLFRYKHPSEEELRALAGK GSLFRYKHPSEEELRALAGKPRPRGRKERW R Y K L R A 0 1 0 0 0 0 3 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 10 1 1286.6255 Q9NX61 Q9NX61 40 49 TMEM161A Transmembrane protein 161A yes yes 3 0.022981 94.363 By MS/MS 1 0 1 1 408110 408110 0 15739 2620 16615 40324 32244 32244 1 98341 0 YKLLGGLAVR ATRGLCAIAQAESLRYKLLGGLAVRRACYG AESLRYKLLGGLAVRRACYGVLRFIMESGA R Y K V R R 1 1 0 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 1 1 0 0 10 1 1088.6706 P23396 P23396 107 116 RPS3 40S ribosomal protein S3 yes yes 2 0.034219 101.25 By MS/MS 8.5 1.12 1 1 1 1 4 4472200 4472200 0 15740 703 16616 40325;40326;40327;40328 32245 32245 1 62758 0 YKPESEELTAER CPAVRLITLEEEMTKYKPESEELTAERITE MTKYKPESEELTAERITEFCHRFLEGKIKP K Y K E R I 1 1 0 0 0 0 4 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 12 1 1450.694 P07237 P07237 327 338 P4HB Protein disulfide-isomerase yes yes 2 0.0033613 131.12 By MS/MS 6 0 1 1 1274600 1274600 0 15741 507 16617 40329 32246 32246 1 8761.9 0 YKQIFLGGVDK RYFPTQALNFAFKDKYKQIFLGGVDKRTQF FKDKYKQIFLGGVDKRTQFWLYFAGNLASG K Y K D K R 0 0 0 1 0 1 0 2 0 1 1 2 0 1 0 0 0 0 1 1 0 0 11 1 1266.6972 P05141;P12236 P05141 95 105 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.00011521 160.77 By MS/MS 6.33 3.5 1 1 2 1 1 6 17328000 17328000 0 15742 487;589 16618 40330;40331;40332;40333;40334;40335 32247;32248;32249;32250 32247 4 599260 0 YKQIFLGGVDKR RYFPTQALNFAFKDKYKQIFLGGVDKRTQF KDKYKQIFLGGVDKRTQFWLYFAGNLASGG K Y K K R T 0 1 0 1 0 1 0 2 0 1 1 2 0 1 0 0 0 0 1 1 0 0 12 2 1422.7983 P05141 P05141 95 106 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.032472 116.84 By MS/MS 8 0 1 1 3379300 3379300 0 15743 487 16619 40336 32251 32251 1 42664 0 YKQSLDDAAK ELRQVTQMRTEESVRYKQSLDDAAKTIQDK EESVRYKQSLDDAAKTIQDKNKEIERLKQL R Y K A K T 2 0 0 2 0 1 0 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1137.5666 P15924 P15924 1465 1474 DSP Desmoplakin yes yes 3 0.0011498 129.88 By MS/MS 2.5 0.5 1 1 2 280480 0 280480 15744 628 16620 40337;40338 32252;32253 32253 2 0 82868 YKTIESETVR RRLEESDVLQEARRKYKTIESETVRTSEVL EARRKYKTIESETVRTSEVLRKKLGELTGT K Y K V R T 0 1 0 0 0 0 2 0 0 1 0 1 0 0 0 1 2 0 1 1 0 0 10 1 1224.635 O43615 O43615 104 113 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0012522 143.5 By MS/MS 7 0 1 1 1116500 1116500 0 15745 221 16621 40339 32254 32254 1 17527 0 YKVDFIEEK EVEAKVALEIFQHSKYKVDFIEEKASQNPE IFQHSKYKVDFIEEKASQNPERIVKLHRIG K Y K E K A 0 0 0 1 0 0 2 0 0 1 0 2 0 1 0 0 0 0 1 1 0 0 9 1 1169.5968 Q9NYK5 Q9NYK5 235 243 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.021025 110.53 By MS/MS 7.5 0.5 1 1 2 8442700 8442700 0 15746 2635 16622 40340;40341 32255 32255 1 116550 0 YLAAGSSNAVK DFNPEEINLDCTNPRYLAAGSSNAVKLSRF TNPRYLAAGSSNAVKLSRFFDKVIEKRYFL R Y L V K L 3 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1079.5611 Q5HYI8 Q5HYI8 185 195 RABL3 Rab-like protein 3 yes yes 2 0.00063532 128.86 By MS/MS 8 0 1 1 3152600 3152600 0 15747 1601 16623 40342 32256 32256 1 39801 0 YLAEFATGNDR ESKVFYYKMKGDYHRYLAEFATGNDRKEAA DYHRYLAEFATGNDRKEAAENSLVAYKAAS R Y L D R K 2 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1255.5833 P62258 P62258 131 141 YWHAE 14-3-3 protein epsilon yes yes 2 0.00079461 125.68 By MS/MS 8 0 1 1 7269200 7269200 0 15748 1146 16624 40343 32257 32257 1 91773 0 YLAEFATGNDRK ESKVFYYKMKGDYHRYLAEFATGNDRKEAA YHRYLAEFATGNDRKEAAENSLVAYKAASD R Y L R K E 2 1 1 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 12 1 1383.6783 P62258 P62258 131 142 YWHAE 14-3-3 protein epsilon yes yes 2;3 0.00023132 137.46 By MS/MS 8 0 2 2 17067000 17067000 0 15749 1146 16625 40344;40345 32258;32259;32260 32259 3 215470 0 YLAEKYEWDVAEAR KGEVSARQELKQRARYLAEKYEWDVAEARK RYLAEKYEWDVAEARKIWCFGPDGTGPNIL R Y L A R K 3 1 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 1 2 1 0 0 14 1 1741.8312 P13639 P13639 634 647 EEF2 Elongation factor 2 yes yes 2;3 2.3056E-10 199.8 By MS/MS 5 0.816 2 2 2 6 9079000 9079000 0 15750 602 16626 40346;40347;40348;40349;40350;40351 32261;32262;32263;32264 32262 4 464640 0 YLAEVAAGDDKK ESKVFYLKMKGDYYRYLAEVAAGDDKKGIV YYRYLAEVAAGDDKKGIVDQSQQAYQEAFE R Y L K K G 3 0 0 2 0 0 1 1 0 0 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1278.6456 P63104 P63104 128 139 YWHAZ 14-3-3 protein zeta/delta yes yes 2;3 2.3825E-05 181.53 By MS/MS By MS/MS 8 0 4 2 2 8198000 8136200 61830 15751 1195 16627 40352;40353;40354;40355 32265;32266;32267 32266 3 102720 83436 YLAEVACGDDRK ESKVFYLKMKGDYFRYLAEVACGDDRKQTI YFRYLAEVACGDDRKQTIDNSQGAYQEAFD R Y L R K Q 2 1 0 2 1 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 12 1 1395.6453 P27348 P27348 128 139 YWHAQ 14-3-3 protein theta yes yes 2 0.00045553 154.84 By MS/MS 8 0 1 1 805680 805680 0 15752 739 16628 40356 32268 32268 1 10172 0 YLAEVASGEK ESKVFYLKMKGDYYRYLAEVASGEKKNSVV GDYYRYLAEVASGEKKNSVVEASEAAYKEA R Y L E K K 2 0 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 10 0 1065.5342 Q04917 Q04917 133 142 YWHAH 14-3-3 protein eta yes yes 2 0.0083507 98.044 By MS/MS 8 0 1 1 971330 971330 0 15753 1294 16629 40357 32269 32269 1 12263 0 YLAEVASGEKK ESKVFYLKMKGDYYRYLAEVASGEKKNSVV DYYRYLAEVASGEKKNSVVEASEAAYKEAF R Y L K K N 2 0 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 11 1 1193.6292 Q04917 Q04917 133 143 YWHAH 14-3-3 protein eta yes yes 2 0.019508 102.06 By MS/MS 8 0 1 1 953900 953900 0 15754 1294 16630 40358 32270 32270 1 12043 0 YLAEVATGEKR ESKVFYLKMKGDYYRYLAEVATGEKRATVV DYYRYLAEVATGEKRATVVESSEKAYSEAH R Y L K R A 2 1 0 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 11 1 1235.651 P61981 P61981 133 143 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 2.8467E-05 142 By MS/MS 7.5 0.5 1 1 2 1553300 1553300 0 15755 1136 16631 40359;40360 32271 32271 1 20161 0 YLATCADDR HSGNISCMDFSSNGKYLATCADDRTIRIWS FSSNGKYLATCADDRTIRIWSTKDFLQREH K Y L D R T 2 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1083.4655 Q9Y4P3 Q9Y4P3 104 112 TBL2 Transducin beta-like protein 2 yes yes 2 9.4712E-05 163.15 By MS/MS 7 0 1 1 2629000 2629000 0 15756 2899 16632 40361 32272 32272 1 41270 0 YLCDEQK VDVAVLKARAKLLQKYLCDEQKELQALYAL ARAKLLQKYLCDEQKELQALYALQALVVTL K Y L Q K E 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 954.41168 Q04637 Q04637 1514 1520 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.020797 111.65 By MS/MS 2 0 1 1 3076900 3076900 0 15757 1291 16633 40362 32273 32273 1 1040700 0 YLCQGSSVEVK THQPINIPFFDVFLRYLCQGSSVEVKEDKC VFLRYLCQGSSVEVKEDKCWEKVEVSSNPH R Y L V K E 0 0 0 0 1 1 1 1 0 0 1 1 0 0 0 2 0 0 1 2 0 0 11 0 1268.6071 Q14999 Q14999 826 836 CUL7 Cullin-7 yes yes 2 0.041946 74.173 By MS/MS 2 0 1 1 158900 158900 0 15758 1464 16634 40363 32274 32274 1 53746 0 YLDEFLLNK RESVFRQITNANELKYLDEFLLNKINDLRS NANELKYLDEFLLNKINDLRSQKTPIESLF K Y L N K I 0 0 1 1 0 0 1 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 9 0 1153.6019 Q13459 Q13459 1513 1521 MYO9B Unconventional myosin-IXb yes yes 2 0.019965 88.948 By MS/MS 2 0 1 1 65229 65229 0 15759 1388 16635 40364 32275 32275 1 22063 0 YLDGLTAER NLEPIFQGYIDSLKRYLDGLTAERTSQNSE IDSLKRYLDGLTAERTSQNSELNNMQDLVE R Y L E R T 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 9 0 1036.5189 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 239 247 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 4.2898E-05 175.51 By MS/MS By MS/MS 4.95 2.82 3 2 3 3 2 2 2 2 1 2 11 11 213620000 92492000 121130000 + 15760 55 16636 40365;40366;40367;40368;40369;40370;40371;40372;40373;40374;40375;40376;40377;40378;40379;40380;40381;40382;40383;40384;40385;40386 32276;32277;32278;32279;32280;32281;32282;32283;32284;32285;32286;32287;32288;32289;32290;32291;32292;32293;32294 32287 19 7373900 53462000 YLDPEYIDR ERVKILYKKIEDLIKYLDPEYIDRIAIPDA IEDLIKYLDPEYIDRIAIPDASKLQFILAE K Y L D R I 0 1 0 2 0 0 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 9 0 1182.5557 O75935 O75935 67 75 DCTN3 Dynactin subunit 3 yes yes 2 0.002505 114.89 By MS/MS 9 0 1 1 2257900 2257900 0 15761 355 16637 40387 32295 32295 1 44435 0 YLEAGAAGLR ADFCQLSGMHLLVGRYLEAGAAGLRWRAAQ LLVGRYLEAGAAGLRWRAAQLIGTCSQNVA R Y L L R W 3 1 0 0 0 0 1 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1019.54 Q9NZL4 Q9NZL4 153 162 HSPBP1 Hsp70-binding protein 1 yes yes 2 0.0010767 122.13 By MS/MS 7 0 1 1 1555600 1555600 0 15762 2651 16638 40388 32296 32296 1 24420 0 YLEATGQLPVK YQPCLPSTQEDVINKYLEATGQLPVKKGKA VINKYLEATGQLPVKKGKAKN_________ K Y L V K K 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 1 0 1 1 0 0 11 0 1217.6656 Q96RP9 Q96RP9 735 745 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0013605 114.4 By MS/MS 5 0 1 1 1107900 1107900 0 15763 2223 16639 40389 32297 32297 1 11111 0 YLECSALQQDGVK PQQGQALAKQIHAVRYLECSALQQDGVKEV VRYLECSALQQDGVKEVFAEAVRAVLNPTP R Y L V K E 1 0 0 1 1 2 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 13 0 1509.7133 P84095 P84095 154 166 RHOG Rho-related GTP-binding protein RhoG yes yes 2 6.5417E-06 198.81 By MS/MS 9 0 1 1 809730 809730 0 15764 1246 16640 40390 32298 32298 1 15936 0 YLEEKGTTEEVCR KDEAQVCAIIERVQRYLEEKGTTEEVCRIY QRYLEEKGTTEEVCRIYLLRILHTYYKFDY R Y L C R I 0 1 0 0 1 0 4 1 0 0 1 1 0 0 0 0 2 0 1 1 0 0 13 1 1612.7403 Q99613;B5ME19 Q99613 489 501 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.5202E-16 263.07 By MS/MS 4.27 1.6 2 2 2 2 2 1 11 42175000 42175000 0 15765 2252 16641 40391;40392;40393;40394;40395;40396;40397;40398;40399;40400;40401 32299;32300;32301;32302;32303 32300 5 3193000 0 YLEKEEK VDQCMNRSIALTQARYLEKEEKCLPPPSIR SIALTQARYLEKEEKCLPPPSIRVVVTVEQ R Y L E K C 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 7 1 937.47566 O15269 O15269 431 437 SPTLC1 Serine palmitoyltransferase 1 yes yes 2;3 0.0099622 148.04 By MS/MS By matching 6.4 0.49 3 2 4 1 7359900 7343500 16414 15766 177 16642 40402;40403;40404;40405;40406 32304;32305 32305 2 77509 16819 YLELCVDLR KHRTWQKIHEPIMLKYLELCVDLRKSHLAK EPIMLKYLELCVDLRKSHLAKEGLYQYKNI K Y L L R K 0 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 0 1 1 0 0 9 0 1179.5958 Q14152 Q14152 54 62 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.023754 87.308 By MS/MS 3 0 1 1 55536 55536 0 15767 1422 16643 40407 32306 32306 1 1016.2 0 YLELLER YGSIDFGKTVVSHPRYLELLERTSRPLKIL KTVVSHPRYLELLERTSRPLKILRHQVLND R Y L E R T 0 1 0 0 0 0 2 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 7 0 934.51238 O75153 O75153 517 523 CLUH Clustered mitochondria protein homolog yes yes 2 0.037605 98.997 By MS/MS 3 0 1 1 437010 437010 0 15768 300 16644 40408 32307 32307 1 7996 0 YLENGKETLQR LRAYLEGTCVEWLRRYLENGKETLQRAEPP WLRRYLENGKETLQRAEPPKTHVTHHPLSD R Y L Q R A 0 1 1 0 0 1 2 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 11 1 1349.6939 P10321;P01893;P30511;P04439 P10321 195 205 HLA-C;HLA-H;HLA-F;HLA-A HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, alpha chain F;HLA class I histocompatibility antigen, A-3 alpha chain no no 2;3 0.023991 98.754 By MS/MS 7.33 0.471 2 1 3 3295700 3295700 0 15769 558;474 16645 40409;40410;40411 32308;32309 32308 2 51398 0 YLESEEYQER LSSVPISPYKDEPWKYLESEEYQERYGSRP DEPWKYLESEEYQERYGSRPVWADYRRNHK K Y L E R Y 0 1 0 0 0 1 4 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 10 0 1344.5834 Q9Y676 Q9Y676 58 67 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 2.5294E-15 244.8 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 8284100 8206800 77247 15770 2932 16646 40412;40413;40414 32310;32311 32311 2 108590 104240 YLEVEPVSR MVASFSILGMLVGLRYLEVEPVSRQKKRN_ MLVGLRYLEVEPVSRQKKRN__________ R Y L S R Q 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 9 0 1090.5659 Q9UKR5 Q9UKR5 127 135 C14orf1 Probable ergosterol biosynthetic protein 28 yes yes 2 0.0040624 110.87 By MS/MS 10 0 1 1 1019500 1019500 0 15771 2763 16647 40415 32312 32312 1 54946 0 YLFLGDYVDR LMKLFEVGGSPSNTRYLFLGDYVDRGYFSI PSNTRYLFLGDYVDRGYFSIECVLYLWSLK R Y L D R G 0 1 0 2 0 0 0 1 0 0 2 0 0 1 0 0 0 0 2 1 0 0 10 0 1259.6186 P48454;Q08209;P16298 P48454 109 118 PPP3CC;PPP3CA;PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 2 0.0083855 97.965 By MS/MS 6 0 1 1 506840 506840 0 15772 631 16648 40416 32313 32313 1 3484.1 0 YLFNCGEGVQR RDSGAALYVFSEFNRYLFNCGEGVQRLMQE EFNRYLFNCGEGVQRLMQEHKLKVARLDNI R Y L Q R L 0 1 1 0 1 1 1 2 0 0 1 0 0 1 0 0 0 0 1 1 0 0 11 0 1341.6136 Q9BQ52 Q9BQ52 83 93 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 3.3092E-05 157.75 By MS/MS 4 0 1 1 1980700 1980700 0 15773 2283 16649 40417 32314 32314 1 186390 0 YLGDFADTLGLR HYSRAYFPDARDMVRYLGDFADTLGLRVQY MVRYLGDFADTLGLRVQYNTTIAHVTLDKD R Y L L R V 1 1 0 2 0 0 0 2 0 0 3 0 0 1 0 0 1 0 1 0 0 0 12 0 1339.6772 Q8IWF2 Q8IWF2 128 139 FOXRED2 FAD-dependent oxidoreductase domain-containing protein 2 yes yes 2 0.000195 150.81 By MS/MS 5.5 0.5 1 1 2 469320 469320 0 15774 1867 16650 40418;40419 32315 32315 1 4299.1 0 YLGDLSGGQVLK GRTEPELLVAHAYTRYLGDLSGGQVLKKIA YTRYLGDLSGGQVLKKIAQKALDLPSSGEG R Y L L K K 0 0 0 1 0 1 0 3 0 0 3 1 0 0 0 1 0 0 1 1 0 0 12 0 1248.6714 P09601 P09601 137 148 HMOX1 Heme oxygenase 1 yes yes 2 0.00012986 155.06 By MS/MS 8.5 0.5 1 1 2 1199500 1199500 0 15775 538 16651 40420;40421 32316 32316 1 15920 0 YLGDLSGGQVLKK GRTEPELLVAHAYTRYLGDLSGGQVLKKIA TRYLGDLSGGQVLKKIAQKALDLPSSGEGL R Y L K K I 0 0 0 1 0 1 0 3 0 0 3 2 0 0 0 1 0 0 1 1 0 0 13 1 1376.7664 P09601 P09601 137 149 HMOX1 Heme oxygenase 1 yes yes 2 0.0068652 104.82 By MS/MS 8 0 1 1 0 0 0 15776 538 16652 40422 32317 32317 1 0 0 YLGFGTPSNLGK FNGLDRIISRRKNEKYLGFGTPSNLGKGRR NEKYLGFGTPSNLGKGRRAAAAADLANRSG K Y L G K G 0 0 1 0 0 0 0 3 0 0 2 1 0 1 1 1 1 0 1 0 0 0 12 0 1252.6452 O76031 O76031 438 449 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 3.2342E-05 172.98 By MS/MS 6.5 1.12 1 1 1 1 4 7752600 7752600 0 15777 360 16653 40423;40424;40425;40426 32318;32319 32318 2 76805 0 YLGLLENLR QPGRFDEVLIRHQVKYLGLLENLRVRRAGF IRHQVKYLGLLENLRVRRAGFAYRRKYEAF K Y L L R V 0 1 1 0 0 0 1 1 0 0 4 0 0 0 0 0 0 0 1 0 0 0 9 0 1089.6182 O00159 O00159 648 656 MYO1C Unconventional myosin-Ic yes yes 2 0.0023364 117.04 By MS/MS 4 0 1 1 515980 515980 0 15778 85 16654 40427 32320 32320 1 48558 0 YLGLYNDPNSNPK VDGERYMTPEDFVQRYLGLYNDPNSNPKIV QRYLGLYNDPNSNPKIVQLLAGVADQTKDG R Y L P K I 0 0 3 1 0 0 0 1 0 0 2 1 0 0 2 1 0 0 2 0 0 0 13 0 1493.7151 O75746 O75746 43 55 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.00017382 165.63 By MS/MS 5 0 1 1 6188900 6188900 0 15779 344 16655 40428 32321 32321 1 62072 0 YLGYANEVGEAFR PRGAERDLYRDTWVRYLGYANEVGEAFRSL VRYLGYANEVGEAFRSLVPAAVVWLSYGVA R Y L F R S 2 1 1 0 0 0 2 2 0 0 1 0 0 1 0 0 0 0 2 1 0 0 13 0 1487.7045 Q9UDX5 Q9UDX5 21 33 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.00020836 161.93 By MS/MS 9 0 1 1 2115400 2115400 0 15780 2711 16656 40429 32322 32322 1 41631 0 YLHENLPIPQR KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ GSLKYLHENLPIPQRNTN____________ K Y L Q R N 0 1 1 0 0 1 1 0 1 1 2 0 0 0 2 0 0 0 1 0 0 0 11 0 1378.7357 P54886 P54886 782 792 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0033226 105.2 By MS/MS 5 0 1 1 2750300 2750300 0 15781 1048 16657 40430 32323 32323 1 27584 0 YLHVGYIVPPAPEK RFSDFLGLHSKLASKYLHVGYIVPPAPEKS KYLHVGYIVPPAPEKSIVGMTKVKVGKEDS K Y L E K S 1 0 0 0 0 0 1 1 1 1 1 1 0 0 3 0 0 0 2 2 0 0 14 0 1581.8555 O60749 O60749 198 211 SNX2 Sorting nexin-2 yes yes 2 0.018479 100.69 By MS/MS 5 0 1 1 525630 525630 0 15782 274 16658 40431 32324 32324 1 5271.8 0 YLIGSGDNPTIVQEGCR GEEDTFSDLIWSNPRYLIGSGDNPTIVQEG IGSGDNPTIVQEGCRYNVMHVAAKENQASI R Y L C R Y 0 1 1 1 1 1 1 3 0 2 1 0 0 0 1 1 1 0 1 1 0 0 17 0 1877.8942 Q86XL3 Q86XL3 335 351 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 3.5748E-44 318.07 By MS/MS 4.5 0.5 1 1 2 7920000 7920000 0 15783 1845 16659 40432;40433 32325 32325 1 670380 0 YLILKDPNK LRCVIDICMKLEEGKYLILKDPNKQVIRVY KLEEGKYLILKDPNKQVIRVYSLPDGTFSS K Y L N K Q 0 0 1 1 0 0 0 0 0 1 2 2 0 0 1 0 0 0 1 0 0 0 9 1 1102.6386 O15371 O15371 506 514 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 0.0010005 148.99 By MS/MS 7 1.63 2 2 2 1 1 1 9 26088000 26088000 0 15784 185 16660 40434;40435;40436;40437;40438;40439;40440;40441;40442 32326;32327;32328;32329 32326 4 254110 0 YLIQDSSILQK NEAKEVRAAGLRALRYLIQDSSILQKVLKL RALRYLIQDSSILQKVLKLKVDYLIARCID R Y L Q K V 0 0 0 1 0 2 0 0 0 2 2 1 0 0 0 2 0 0 1 0 0 0 11 0 1306.7133 Q6R327 Q6R327 109 119 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 3.7161E-09 210.08 By MS/MS 2.5 0.5 1 1 2 403170 403170 0 15785 1724 16661 40443;40444 32330 32330 1 112200 0 YLKDHEKK DVNKDGKLDFEEFMKYLKDHEKKMKLAFKS DFEEFMKYLKDHEKKMKLAFKSLDKNNDGK K Y L K K M 0 0 0 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 1 0 0 0 8 2 1059.5713 Q6NUK1 Q6NUK1 83 90 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 3 0.015526 117.4 By MS/MS 7 0 1 1 219370 219370 0 15786 1687 16662 40445 32331 32331 1 3443.7 0 YLKDVTLQK TAQAIKGMHIRKATKYLKDVTLQKQCVPFR IRKATKYLKDVTLQKQCVPFRRYNGGVGRC K Y L Q K Q 0 0 0 1 0 1 0 0 0 0 2 2 0 0 0 0 1 0 1 1 0 0 9 1 1106.6336 P18621 P18621 47 55 RPL17 60S ribosomal protein L17 yes yes 2;3 7.2916E-05 200.56 By MS/MS 9 0 2 2 1674200 1674200 0 15787 654 16663 40446;40447 32332;32333 32333 2 32949 0 YLLDSCAPLLR FYMKNILMSKVKPPKYLLDSCAPLLRYLSH KPPKYLLDSCAPLLRYLSHSEFKDLILPTI K Y L L R Y 1 1 0 1 1 0 0 0 0 0 4 0 0 0 1 1 0 0 1 0 0 0 11 0 1319.6908 Q92616 Q92616 241 251 GCN1L1 Translational activator GCN1 yes yes 2 5.0963E-07 196.99 By MS/MS 3 0.816 1 1 1 3 2292400 2292400 0 15788 2064 16664 40448;40449;40450 32334;32335;32336 32334 2 654940 0 YLLFPSLEVK PHHGSRLAEYSVNIRYLLFPSLEVKELSKD SVNIRYLLFPSLEVKELSKDSPALKTLQDD R Y L V K E 0 0 0 0 0 0 1 0 0 0 3 1 0 1 1 1 0 0 1 1 0 0 10 0 1207.6853 Q96JX3 Q96JX3 548 557 SERAC1 Protein SERAC1 yes yes 2 0.018295 87.639 By MS/MS 5 0 1 1 105810 105810 0 15789 2180 16665 40451 32337 32337 1 1061.2 0 YLLLGQGDFIR NKKYSLLDHMQAMRRYLLLGQGDFIRHLMD AMRRYLLLGQGDFIRHLMDLLKPELVRPAT R Y L I R H 0 1 0 1 0 1 0 2 0 1 3 0 0 1 0 0 0 0 1 0 0 0 11 0 1293.7081 Q96CW5 Q96CW5 565 575 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 0.0026683 115.78 By MS/MS 4 0 1 1 134590 134590 0 15790 2128 16666 40452 32338 32338 1 12666 0 YLLLLAAGDPR KFASTVFPSDHIPSRYLLLLAAGDPREEVH IPSRYLLLLAAGDPREEVHGEAQRVLRCLP R Y L P R E 2 1 0 1 0 0 0 1 0 0 4 0 0 0 1 0 0 0 1 0 0 0 11 0 1200.6867 Q5VYK3 Q5VYK3 517 527 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.003823 121.73 By MS/MS 3 0.816 1 1 1 3 573800 573800 0 15791 1656 16667 40453;40454;40455 32339 32339 1 171430 0 YLLMSIDQR EEHLEKHRKDKAHKRYLLMSIDQRKKMLKN DKAHKRYLLMSIDQRKKMLKNLRNTNYDVF R Y L Q R K 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 1 0 0 0 9 0 1137.5852 P82914 P82914 155 163 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.00047726 153.08 By MS/MS 8.5 0.5 1 1 2 930180 930180 0 15792 1235 16668 40456;40457 32340;32341 32341 2 15214 0 YLLQEQLK LGREVEEKIKQTHRKYLLQEQLKIIKKELG IKQTHRKYLLQEQLKIIKKELGLEKDDKDA K Y L L K I 0 0 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 8 0 1033.5808 P36776 P36776 394 401 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.010393 110.31 By MS/MS 4 0 1 1 1575800 1575800 0 15793 839 16669 40458 32342 32342 1 148300 0 YLLQPLGDFSR VLTLAGVARIFNTRRYLLQPLGDFSRAWDV NTRRYLLQPLGDFSRAWDVLLDHIQSAALS R Y L S R A 0 1 0 1 0 1 0 1 0 0 3 0 0 1 1 1 0 0 1 0 0 0 11 0 1307.6874 Q7Z3U7 Q7Z3U7 1131 1141 MON2 Protein MON2 homolog yes yes 2 0.0011947 117.71 By MS/MS 2 0 1 1 152770 152770 0 15794 1787 16670 40459 32343;32344 32343 2 51675 0 YLLYGEK LHYLKNTSFAYPAIRYLLYGEKGTGKTLSL SFAYPAIRYLLYGEKGTGKTLSLCHVIHFC R Y L E K G 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 7 0 884.46437 P51398 P51398 124 130 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.043896 94.262 By MS/MS 7 0 1 1 6448300 6448300 0 15795 993 16671 40460 32345 32345 1 101230 0 YLNFFTK TIEMNEPVQLTFALRYLNFFTKATPLSSTV VQLTFALRYLNFFTKATPLSSTVTLSMSAD R Y L T K A 0 0 1 0 0 0 0 0 0 0 1 1 0 2 0 0 1 0 1 0 0 0 7 0 931.48035 P12004 P12004 211 217 PCNA Proliferating cell nuclear antigen yes yes 2 0.017122 116.9 By MS/MS 7.5 0.5 1 1 2 1108300 1108300 0 15796 587 16672 40461;40462 32346;32347 32347 2 14915 0 YLNIFGESQPNPK KNGEFFMSPNDFVTRYLNIFGESQPNPKTV TRYLNIFGESQPNPKTVELLSGVVDQTKDG R Y L P K T 0 0 2 0 0 1 1 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 13 0 1505.7514 Q9UJS0 Q9UJS0 44 56 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.6764E-24 271.21 By MS/MS By MS/MS 5.64 2.64 1 1 1 3 1 1 1 1 1 10 1 51552000 51517000 34621 15797 2748 16673 40463;40464;40465;40466;40467;40468;40469;40470;40471;40472;40473 32348;32349;32350;32351;32352;32353;32354;32355;32356;32357;32358;32359;32360;32361 32359 14 711350 29074 YLNTQFIK EEYSKGADYMDCLYRYLNTQFIKKNKLTEA YMDCLYRYLNTQFIKKNKLTEADLQYGYGG R Y L I K K 0 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 8 0 1025.5546 Q13617 Q13617 107 114 CUL2 Cullin-2 yes yes 2 0.02268 95.741 By MS/MS 4.5 0.5 1 1 2 932560 932560 0 15798 1403 16674 40474;40475 32362 32362 1 69462 0 YLPHSAGR ISLQDYIAVKEKYAKYLPHSAGRYAAKRFR VKEKYAKYLPHSAGRYAAKRFRKAQCPIVE K Y L G R Y 1 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 899.46135 P46782 P46782 48 55 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.02311 96.19 By MS/MS 8.5 0.5 1 1 2 20855000 20855000 0 15799 919 16675 40476;40477 32363 32363 1 408800 0 YLQQELPVR AGRSQDGSHLLKSARYLQQELPVRIAHRIK LLKSARYLQQELPVRIAHRIKGFRCLPFII R Y L V R I 0 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 9 0 1144.6241 O14874 O14874 93 101 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes yes 2 0.00070687 140.35 By MS/MS 6.5 0.5 1 1 2 4241200 4241200 0 15800 142 16676 40478;40479 32364 32364 1 61769 0 YLQTLTTIAAEK ASMVITESPAALQLRYLQTLTTIAAEKNST QLRYLQTLTTIAAEKNSTIVFPLPIDMLQG R Y L E K N 2 0 0 0 0 1 1 0 0 1 2 1 0 0 0 0 3 0 1 0 0 0 12 0 1350.7395 P27105 P27105 252 263 STOM Erythrocyte band 7 integral membrane protein yes yes 2 0.00038818 138.42 By MS/MS 8 0 1 1 1389400 1389400 0 15801 737 16677 40480 32365 32365 1 17541 0 YLQVECDR VETYYGPGRLYTLIKYLQVECDRQVEKVVD RLYTLIKYLQVECDRQVEKVVDKFIKQRDY K Y L D R Q 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 1081.4862 Q9H9E3 Q9H9E3 305 312 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.015085 105.1 By MS/MS By matching 5.8 2.52 1 1 2 1 1 1 1 1 1 7 3 13243000 9823000 3420200 15802 2486 16678 40481;40482;40483;40484;40485;40486;40487;40488;40489;40490 32366 32366 1 282230 3891500 YLQWEIGNK AKRLNLATECLPLDKYLQWEIGNKNLTLDQ CLPLDKYLQWEIGNKNLTLDQMIRILLCLK K Y L N K N 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 1 1 0 0 0 9 0 1149.5819 Q7L0Y3 Q7L0Y3 341 349 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0016116 126.24 By MS/MS 7 0 1 1 4210700 4210700 0 15803 1759 16679 40491 32367 32367 1 66101 0 YLRDYSR SVVAGGGAIEMELSKYLRDYSRTIPGKQQL AIEMELSKYLRDYSRTIPGKQQLLIGAYAK K Y L S R T 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 7 1 971.48248 Q99832 Q99832 419 425 CCT7 T-complex protein 1 subunit eta yes yes 3 0.051312 84.916 By MS/MS By matching 6 0 2 1 1 12324000 12282000 41670 15804 2270 16680 40492;40493 32368 32368 1 84431 42700 YLREEVK YITFQSDTDAQQAFKYLREEVKTFQGKPIM TDAQQAFKYLREEVKTFQGKPIMARIKAIN K Y L V K T 0 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 7 1 935.50763 Q71RC2;Q92615 Q71RC2 254 260 LARP4;LARP4B La-related protein 4;La-related protein 4B no no 3 0.047095 89.142 By MS/MS 4 0 1 1 442930 442930 0 15805 1750;2063 16681 40494 32369 32369 1 41683 0 YLSDSCSPR FEQQLANRILSTAGKYLSDSCSPRSLAGFQ LSTAGKYLSDSCSPRSLAGFQESILTDKKN K Y L P R S 0 1 0 1 1 0 0 0 0 0 1 0 0 0 1 3 0 0 1 0 0 0 9 0 1083.4655 P83436 P83436 500 508 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 2 0.014159 93.143 By MS/MS 4.5 0.5 1 1 2 661230 661230 0 15806 1240 16682 40495;40496 32370 32370 1 32501 0 YLSEVASGDNK ESKVFYLKMKGDYFRYLSEVASGDNKQTTV DYFRYLSEVASGDNKQTTVSNSQQAYQEAF R Y L N K Q 1 0 1 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1181.5564 P31946 P31946 130 140 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.00023376 140.17 By MS/MS By matching 5.86 1.81 1 1 1 1 1 2 1 6 3566400 2203200 1363200 15807 793 16683 40497;40498;40499;40500;40501;40502;40503 32371 32371 1 27815 404100 YLSLANNK SRITPGAFRNLGSLRYLSLANNKLQVLPIG RNLGSLRYLSLANNKLQVLPIGLFQGLDSL R Y L N K L 1 0 2 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 921.49198 Q8TF66 Q8TF66 105 112 LRRC15 Leucine-rich repeat-containing protein 15 yes yes 2 0.044903 96.19 By MS/MS 10 0 1 1 1558500 0 1558500 15808 2008 16684 40504 32372 32372 1 0 1995400 YLSQLKDAHR VLSQHLGKPPEVTNRYLSQLKDAHRSHPFI EVTNRYLSQLKDAHRSHPFIKEYQAKENDF R Y L H R S 1 1 0 1 0 1 0 0 1 0 2 1 0 0 0 1 0 0 1 0 0 0 10 1 1229.6517 O14579 O14579 273 282 COPE Coatomer subunit epsilon yes yes 3 0.0046655 112.85 By MS/MS 8 0 1 1 4006000 4006000 0 15809 127 16685 40505 32373 32373 1 50575 0 YLSTEAGQR PPAQVCLKGKLHIFKYLSTEAGQRGSALGD KLHIFKYLSTEAGQRGSALGDLAPSRPPSF K Y L Q R G 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 9 0 1023.4985 O75427 O75427 257 265 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.024738 101.25 By MS/MS 5 0 1 1 2451100 2451100 0 15810 326 16686 40506 32374 32374 1 24583 0 YLTASQLVPPDNQDTR SIMIKFWTAMFSDKKYLTASQLVPPDNQDT LTASQLVPPDNQDTRSNLDITVGSRQQATQ K Y L T R S 1 1 1 2 0 2 0 0 0 0 2 0 0 0 2 1 2 0 1 1 0 0 16 0 1816.8955 P42356 P42356 1420 1435 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.025939 78.615 By MS/MS 2 0 1 1 321090 321090 0 15811 880 16687 40507 32375 32375 1 108610 0 YLTEHPDPNNENIVGYNNKK FFRFTADEARDLIQRYLTEHPDPNNENIVG PDPNNENIVGYNNKKCWPRDARMRLMKHDV R Y L K K C 0 0 5 1 0 0 2 1 1 1 1 2 0 0 2 0 1 0 2 1 0 0 20 1 2358.124 Q6P2Q9 Q6P2Q9 1113 1132 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 1.8042E-05 165.16 By MS/MS 2 0 1 1 556410 556410 0 15812 1708 16688 40508 32376 32376 1 188200 0 YLTESYGTGQDIDDR ESGAGKTENTKFVLRYLTESYGTGQDIDDR YLTESYGTGQDIDDRIVEANPLLEAFGNAK R Y L D R I 0 1 0 3 0 1 1 2 0 1 1 0 0 0 0 1 2 0 2 0 0 0 15 0 1731.7588 Q9UM54 Q9UM54 167 181 MYO6 Unconventional myosin-VI yes yes 2 6.6247E-56 345.64 By MS/MS 3 0 1 1 523910 523910 0 15813 2781 16689 40509 32377;32378 32377 2 9586 0 YLTTAVITNK QYLNAIQTMCPHILRYLTTAVITNKDVRKR PHILRYLTTAVITNKDVRKRRQVLKDLVKV R Y L N K D 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 3 0 1 1 0 0 10 0 1122.6285 P60228 P60228 256 265 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 1.0665E-05 174.02 By MS/MS By matching 7.17 1.07 2 2 1 1 4 2 85272000 85023000 249370 15814 1090 16690 40510;40511;40512;40513;40514;40515 32379;32380;32381 32381 3 710650 302670 YLTTAVITNKDVR QYLNAIQTMCPHILRYLTTAVITNKDVRKR LRYLTTAVITNKDVRKRRQVLKDLVKVIQQ R Y L V R K 1 1 1 1 0 0 0 0 0 1 1 1 0 0 0 0 3 0 1 2 0 0 13 1 1492.8249 P60228 P60228 256 268 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 0.00067688 174.57 By MS/MS 6.5 0.5 2 2 4 33105000 33105000 0 15815 1090 16691 40516;40517;40518;40519 32382;32383;32384 32383 3 257870 0 YLTVAAIFR DSKNMMAACDPRHGRYLTVAAIFRGRMSMK DPRHGRYLTVAAIFRGRMSMKEVDEQMLNV R Y L F R G 2 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 9 0 1052.6019 Q13885;Q9BVA1 Q13885 310 318 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 7.1724E-07 186.13 By MS/MS 7.5 1.12 1 1 1 1 4 1170500 1170500 0 15816 1412;2331 16692 40520;40521;40522;40523 32385;32386 32385 2 9940.5 0 YLTVAAVFR DAKNMMAACDPRHGRYLTVAAVFRGRMSMK DPRHGRYLTVAAVFRGRMSMKEVDEQMLNV R Y L F R G 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 9 0 1038.5862 P04350;P68371;P07437 P68371 310 318 TUBB4A;TUBB4B;TUBB Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain no no 2 7.161E-07 195.81 By MS/MS 5.1 2.47 1 1 1 1 1 2 1 1 1 10 38485000 38485000 0 15817 1212;509;472 16693 40524;40525;40526;40527;40528;40529;40530;40531;40532;40533 32387;32388;32389;32390;32391;32392 32388 6 383190 0 YLTVATVFR DAKNMMAACDPRHGRYLTVATVFRGRMSMK DPRHGRYLTVATVFRGRMSMKEVDEQMLAI R Y L F R G 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 2 0 1 2 0 0 9 0 1068.5968 Q13509;Q9BUF5 Q13509 310 318 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 2 1.1711E-05 178.83 By MS/MS 7 0 1 1 257580 257580 0 15818 1393;2324 16694 40534 32393 32393 1 4043.5 0 YLVIDEAHR MLIKEKSVFKKFNWRYLVIDEAHRIKNEKS KKFNWRYLVIDEAHRIKNEKSKLSEIVREF R Y L H R I 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1114.5771 O60264;P28370 O60264 304 312 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.0034499 111.95 By MS/MS 3 0 1 1 2487300 2487300 0 15819 251;755 16695 40535 32394 32394 1 45510 0 YLVLDEADR VDMMERGKIGLDFCKYLVLDEADRMLDMGF GLDFCKYLVLDEADRMLDMGFEPQIRRIVE K Y L D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1092.5451 O00571;O15523;Q9NQI0 O00571 343 351 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.0030149 115.7 By MS/MS By MS/MS 5.5 0.866 3 1 2 2 18844000 18658000 185750 15820 116 16696 40536;40537;40538;40539 32395;32396;32397 32396 3 190830 155990 YLVNPEGQVVK LVDSSKKEPRWNFWKYLVNPEGQVVKFWKP NFWKYLVNPEGQVVKFWKPEEPIEVIRPDI K Y L V K F 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 3 0 0 11 0 1244.6765 Q8TED1 Q8TED1 169 179 GPX8 Probable glutathione peroxidase 8 yes yes 2 0.0032912 108.43 By MS/MS 9.5 0.5 1 1 2 3464900 3464900 0 15821 2000 16697 40540;40541 32398 32398 1 70857 0 YLVQDTDEFILPTGANK TGMNPLSPYLNVDPRYLVQDTDEFILPTGA VQDTDEFILPTGANKTRGRFELAFFTIGGC R Y L N K T 1 0 1 2 0 1 1 1 0 1 2 1 0 1 1 0 2 0 1 1 0 0 17 0 1922.9626 O14925;Q5SRD1 O14925 52 68 TIMM23;TIMM23B Mitochondrial import inner membrane translocase subunit Tim23;Putative mitochondrial import inner membrane translocase subunit Tim23B yes no 2;3 1.4291E-16 250.52 By MS/MS By matching 9 0.535 1 5 1 6 1 15329000 15275000 54198 15822 145 16698 40542;40543;40544;40545;40546;40547;40548 32399;32400;32401;32402;32403;32404;32405;32406;32407 32407 9 306440 123590 YLVQDTDEFILPTGANKTR TGMNPLSPYLNVDPRYLVQDTDEFILPTGA DTDEFILPTGANKTRGRFELAFFTIGGCCM R Y L T R G 1 1 1 2 0 1 1 1 0 1 2 1 0 1 1 0 3 0 1 1 0 0 19 1 2180.1113 O14925 O14925 52 70 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 3 6.2669E-05 143.67 By MS/MS 8.5 0.5 1 1 2 1257500 1257500 0 15823 145 16699 40549;40550 32408 32408 1 23166 0 YLYEIAR LCDEFKADEKKFWGKYLYEIARRHPYFYAP DEKKFWGKYLYEIARRHPYFYAPELLYYAN K Y L A R R 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 0 7 0 926.48617 CON__P02768-1;P02768;CON__P02769 CON__P02769 161 167 ALB Serum albumin no no 2 0.039458 97.602 By MS/MS 5.5 0.5 1 1 2 3959800 3959800 0 + 15824 43;42 16700 40551;40552 32409;32410 32410 2 33965 0 YLYSSEDYIK ILLWDVDGGLTQIDKYLYSSEDYIKSGALL TQIDKYLYSSEDYIKSGALLACGIVNSGVR K Y L I K S 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 2 0 0 3 0 0 0 10 0 1279.5972 Q13200 Q13200 432 441 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 1.8537E-07 182.98 By MS/MS 4 0 1 1 6256400 6256400 0 15825 1365 16701 40553 32411 32411 1 588770 0 YLYTLVITDK KKNKDNVKFKVRCSRYLYTLVITDKEKAEK VRCSRYLYTLVITDKEKAEKLKQSLPPGLA R Y L D K E 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 2 0 2 1 0 0 10 0 1227.6751 P63173 P63173 41 50 RPL38 60S ribosomal protein L38 yes yes 2 0.00011302 153.05 By MS/MS 10 0 1 1 800260 800260 0 15826 1197 16702 40554 32412 32412 1 43131 0 YLYTLVITDKEK KKNKDNVKFKVRCSRYLYTLVITDKEKAEK CSRYLYTLVITDKEKAEKLKQSLPPGLAVK R Y L E K A 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 2 0 2 1 0 0 12 1 1484.8126 P63173 P63173 41 52 RPL38 60S ribosomal protein L38 yes yes 2;3 7.7697E-12 233.84 By MS/MS 10 0 2 2 2190400 2190400 0 15827 1197 16703 40555;40556 32413;32414 32414 2 118060 0 YMACCLLYR EPANQMVKCDPRHGKYMACCLLYRGDVVPK DPRHGKYMACCLLYRGDVVPKDVNAAIATI K Y M Y R G 1 1 0 0 2 0 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 9 0 1248.5454 P68363;P68366;Q71U36;Q9BQE3;A6NHL2 Q9BQE3 312 320 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBAL3 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3 no no 2 0.00075588 138.85 By MS/MS By matching 7.36 1.49 1 3 2 2 2 1 10 1 99432000 99387000 44630 15828 1210;1751;2290;1211;22 16704;16705 40557;40558;40559;40560;40561;40562;40563;40564;40565;40566;40567 32415;32416;32417;32418;32419;32420;32421;32422 32419 9 7 766310 45733 YMDAWNTVSR LDNSEQKCIAMCMDRYMDAWNTVSRAYNSR MCMDRYMDAWNTVSRAYNSRLQRERANM__ R Y M S R A 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 1 1 1 1 0 0 10 0 1241.5499 Q9Y5L4 Q9Y5L4 73 82 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 0.00099297 123.11 By MS/MS 10 0 1 1 183110 183110 0 15829 2916 16706 40568 32423 32423 1211 1 9869.1 0 YMEEAIMQPLDHK DPATGMVMNLADLKKYMEEAIMQPLDHKNL KKYMEEAIMQPLDHKNLDMDVPYFADVVST K Y M H K N 1 0 0 1 0 1 2 0 1 1 1 1 2 0 1 0 0 0 1 0 0 0 13 0 1603.7374 Q03393 Q03393 79 91 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes yes 2 0.00041133 139.38 By MS/MS 9 0 1 1 583380 583380 0 15830 1287 16707 40569 32424 32424 766 1 11481 0 YNACILEYK PKGESKDLLFILTAKYNACILEYKQSGESI FILTAKYNACILEYKQSGESIDIITRAHGN K Y N Y K Q 1 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 9 0 1172.5536 Q16531 Q16531 84 92 DDB1 DNA damage-binding protein 1 yes yes 2 0.0026023 113.66 By MS/MS 3 0 1 1 286920 286920 0 15831 1549 16708 40570 32425 32425 1 5249.9 0 YNADEAR GLRDYQDNKADVILKYNADEARSLKAYGEL NKADVILKYNADEARSLKAYGELPEHAKIN K Y N A R S 2 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 0 837.3617 P47813;O14602 P47813 95 101 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 0.016931 117.4 By MS/MS 9 0 1 1 20376000 20376000 0 15832 927 16709 40571 32426 32426 1 401010 0 YNADYDLSAR ISVPHKIITHLRKEKYNADYDLSARQGADT LRKEKYNADYDLSARQGADTLAFMSLLEEK K Y N A R Q 2 1 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 10 0 1186.5255 Q13505 Q13505 228 237 MTX1 Metaxin-1 yes yes 2 0.0010668 138.22 By MS/MS 8 0 1 1 1030900 1030900 0 15833 1392 16710 40572 32427 32427 1 13015 0 YNANLTK RLFQGQRAAMLSLLRYNANLTKMKNTLISA AAMLSLLRYNANLTKMKNTLISASQQLKAK R Y N T K M 1 0 2 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 7 0 822.42357 O15111 O15111 458 464 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 2 0.021611 111.04 By MS/MS 5 0 1 1 406660 406660 0 15834 160 16711 40573 32428 32428 1 4078.6 0 YNEFSVSLLNEDPK VLKDEAMVLHLTLGKYNEFSVSLLNEDPKS KYNEFSVSLLNEDPKSLDIFIKAVHTTKEL K Y N P K S 0 0 2 1 0 0 2 0 0 0 2 1 0 1 1 2 0 0 1 1 0 0 14 0 1653.7886 Q9H583 Q9H583 1067 1080 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 1.6442E-05 198.32 By MS/MS 2 0 2 2 79880 79880 0 15835 2451 16712 40574;40575 32429;32430 32429 2 27019 0 YNEQHVPGSPFTAR SYLPVLPGDYSILVKYNEQHVPGSPFTARV KYNEQHVPGSPFTARVTGDDSMRMSHLKVG K Y N A R V 1 1 1 0 0 1 1 1 1 0 0 0 0 1 2 1 1 0 1 1 0 0 14 0 1601.7587 P21333 P21333 1938 1951 FLNA Filamin-A yes yes 3 0.00089323 157.33 By MS/MS 2 0.816 1 1 1 3 1933100 1933100 0 15836 677 16713 40576;40577;40578 32431;32432 32432 2 544670 0 YNFFCQGTR LYMFCELVTGVWEGKYNFFCQGTRTAGESD GVWEGKYNFFCQGTRTAGESDMKIIRVLWW K Y N T R T 0 1 1 0 1 1 0 1 0 0 0 0 0 2 0 0 1 0 1 0 0 0 9 0 1191.5131 Q9NYP7 Q9NYP7 92 100 ELOVL5 Elongation of very long chain fatty acids protein 5 yes yes 2 0.010114 100.25 By MS/MS 2 0.816 1 1 1 3 532720 532720 0 15837 2636 16714 40579;40580;40581 32433;32434 32434 2 142420 0 YNFFTGCPK GRCQVFEETQIGGERYNFFTGCPKAKTCTF QIGGERYNFFTGCPKAKTCTFILRGGAEQF R Y N P K A 0 0 1 0 1 0 0 1 0 0 0 1 0 2 1 0 1 0 1 0 0 0 9 0 1132.5012 Q99832 Q99832 358 366 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00078147 138.06 By MS/MS 6 0.816 1 1 1 3 42678000 42678000 0 15838 2270 16715 40582;40583;40584 32435;32436;32437 32436 3 304900 0 YNFPNPNPFVEDDMDKNEIASVAYR NHNFSQQCLRMGKERYNFPNPNPFVEDDMD EDDMDKNEIASVAYRYRRWKLGDDIDLIVR R Y N Y R Y 2 1 4 3 0 0 2 0 0 1 0 1 1 2 3 1 0 0 2 2 0 0 25 1 2944.3338 O15371 O15371 335 359 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.002188 78.975 By MS/MS 5.5 0.5 1 1 2 1441600 1441600 0 15839 185 16716 40585;40586 32438 32438 96 1 11040 0 YNFPVEVEVPMER KNLLIFENLIDLKRRYNFPVEVEVPMERKK RRYNFPVEVEVPMERKKKYIEIRKEAREAA R Y N E R K 0 1 1 0 0 0 3 0 0 0 0 0 1 1 2 0 0 0 1 3 0 0 13 0 1607.7654 P78527 P78527 1988 2000 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00021431 160.52 By MS/MS 1.67 0.471 1 2 3 775120 775120 0 15840 1225 16717;16718 40587;40588;40589 32439;32440;32441;32442 32440 736 4 234920 0 YNGEPEHIER LTPLILKPFGNSISRYNGEPEHIERNDAPH NSISRYNGEPEHIERNDAPHKNTQEKFSLS R Y N E R N 0 1 1 0 0 0 3 1 1 1 0 0 0 0 1 0 0 0 1 0 0 0 10 0 1242.5629 Q14739 Q14739 132 141 LBR Lamin-B receptor yes yes 2 0.0043212 94.409 By MS/MS 1.5 0.5 1 1 2 182370 182370 0 15841 1456 16719 40590;40591 32443 32443 1 51798 0 YNGLIHR YSTEPNNLKARNSFRYNGLIHRKTVGVEPA LKARNSFRYNGLIHRKTVGVEPAADGKGVV R Y N H R K 0 1 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 871.46644 P46779 P46779 40 46 RPL28 60S ribosomal protein L28 yes yes 2 0.048248 90.986 By MS/MS 9 0 1 1 973760 973760 0 15842 917 16720 40592 32444 32444 1 19164 0 YNHLVYSQIPAAVK IVIRQISDLMGLIPKYNHLVYSQIPAAVKL KYNHLVYSQIPAAVKLTYQDAVNLQNYVEE K Y N V K L 2 0 1 0 0 1 0 0 1 1 1 1 0 0 1 1 0 0 2 2 0 0 14 0 1601.8566 O95071 O95071 1805 1818 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.032703 73.219 By MS/MS 1.5 0.5 1 1 2 635880 635880 0 15843 384 16721 40593;40594 32445 32445 1 202700 0 YNIEVVCEYIVK VAEGAPIIPISAQLKYNIEVVCEYIVKKIP QLKYNIEVVCEYIVKKIPVPPRDFTSEPRL K Y N V K K 0 0 1 0 1 0 2 0 0 2 0 1 0 0 0 0 0 0 2 3 0 0 12 0 1527.7643 P41091;Q2VIR3 P41091 230 241 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 1.0129E-17 248.98 By MS/MS 6.5 0.5 1 1 2 1524400 1524400 0 15844 866 16722 40595;40596 32446 32446 1 11071 0 YNIMLVR TGGKVADMALHYANKYNIMLVRLNSKWDLR MALHYANKYNIMLVRLNSKWDLRRLCKTVG K Y N V R L 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 7 0 907.49496 P50990 P50990 308 314 CCT8 T-complex protein 1 subunit theta yes yes 2 0.044784 92.467 By MS/MS 6 0 1 1 1992400 1992400 0 15845 984 16723 40597 32447 32447 539 1 13696 0 YNIPHGPVVGSTR YADLSDTELTTLLRRYNIPHGPVVGSTRRL RRYNIPHGPVVGSTRRLYEKKIFEYETQRR R Y N T R R 0 1 1 0 0 0 0 2 1 1 0 0 0 0 2 1 1 0 1 2 0 0 13 0 1395.7259 P50402 P50402 19 31 EMD Emerin yes yes 2;3 0.00077484 128.88 By MS/MS 8.5 1.12 2 2 2 2 8 36590000 36590000 0 15846 973 16724 40598;40599;40600;40601;40602;40603;40604;40605 32448;32449;32450;32451 32449 4 581000 0 YNLGLDLR TMERSARQIMRTAMKYNLGLDLRTAAYVNA IMRTAMKYNLGLDLRTAAYVNAIEKVFKVY K Y N L R T 0 1 1 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 8 0 962.51853 P00367;P49448 P00367 528 535 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.0031942 133.86 By MS/MS 6 0 1 1 3046600 3046600 0 15847 441 16725 40606 32452 32452 1 20943 0 YNNCWLAR LTLLEQQGLIRKLPKYNNCWLARTDPKDVA LIRKLPKYNNCWLARTDPKDVARVESKTVI K Y N A R T 1 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 8 0 1095.492 Q16822 Q16822 89 96 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.0060467 120.65 By MS/MS 5 0 1 1 1700900 1700900 0 15848 1560 16726 40607 32453 32453 1 17059 0 YNPENLATLER QMRANVGKLLKGIDRYNPENLATLERYVET GIDRYNPENLATLERYVETQAKENAYDLEA R Y N E R Y 1 1 2 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 11 0 1318.6517 Q9UBQ5 Q9UBQ5 21 31 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 1.7254E-06 175.65 By MS/MS By MS/MS 8.8 0.748 2 2 1 3 2 51718000 51422000 295970 15849 2703 16727 40608;40609;40610;40611;40612 32454;32455;32456;32457 32456 4 987360 633560 YNRDFESHITSYK NNAKALSTLRQKIRKYNRDFESHITSYKQN RKYNRDFESHITSYKQNPEQSADEDAEKNE K Y N Y K Q 0 1 1 1 0 0 1 0 1 1 0 1 0 1 0 2 1 0 2 0 0 0 13 1 1658.7689 Q99613;B5ME19 Q99613 148 160 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.019794 121.56 By MS/MS 4.5 0.5 1 1 2 6158100 6158100 0 15850 2252 16728 40613;40614 32458 32458 1 559650 0 YNVSTTPYLQSVK VKTPNTETRTSCLIKYNVSTTPYLQSVKKK IKYNVSTTPYLQSVKKKVQFDGTNSAFKEL K Y N V K K 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 2 0 2 2 0 0 13 0 1498.7668 Q8WWK9 Q8WWK9 592 604 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.00036946 145.14 By MS/MS 4.5 0.5 1 1 2 4245800 4245800 0 15851 2035 16729 40615;40616 32459 32459 1 278920 0 YNYLSLDSAK EELLNKLKLERDFSRYNYLSLDSAKVNGVD RDFSRYNYLSLDSAKVNGVDDAANFRTVRN R Y N A K V 1 0 1 1 0 0 0 0 0 0 2 1 0 0 0 2 0 0 2 0 0 0 10 0 1172.5714 O43795 O43795 232 241 MYO1B Unconventional myosin-Ib yes yes 2 0.029112 82.417 By MS/MS 3 0 1 1 726170 726170 0 15852 235 16730 40617 32460 32460 1 13287 0 YPALIGNLVK WINRITAASQEHGLKYPALIGNLVKCQVEL EHGLKYPALIGNLVKCQVELNRKVLADLAI K Y P V K C 1 0 1 0 0 0 0 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 10 0 1086.6437 Q9BYC9 Q9BYC9 83 92 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.010505 93.195 By MS/MS 9 0 1 1 342390 342390 0 15853 2367 16731 40618 32461 32461 1 6738.3 0 YPANSIVVVGGCPVCR HHPRVYNIHSRTVTRYPANSIVVVGGCPVC PANSIVVVGGCPVCRVGVLEDCFTFLGIFL R Y P C R V 1 1 1 0 2 0 0 2 0 1 0 0 0 0 2 1 0 0 1 4 0 0 16 0 1746.8545 O95415 O95415 67 82 BRI3 Brain protein I3 yes yes 2 1.2237E-05 201.38 By MS/MS 9.5 0.5 1 1 2 833180 833180 0 15854 410 16732 40619;40620 32462 32462 1 42078 0 YPASTVQILGAEK ARLIAHAGSLTNLAKYPASTVQILGAEKAL AKYPASTVQILGAEKALFRALKTRGNTPKY K Y P E K A 2 0 0 0 0 1 1 1 0 1 1 1 0 0 1 1 1 0 1 1 0 0 13 0 1375.7347 O00567 O00567 321 333 NOP56 Nucleolar protein 56 yes yes 2 0.00013408 169.89 By MS/MS 5 0 1 1 1500700 1500700 0 15855 115 16733 40621 32463 32463 1 15051 0 YPDPLIK KGIPHLVTHDARTIRYPDPLIKVNDTIQID THDARTIRYPDPLIKVNDTIQIDLETGKIT R Y P I K V 0 0 0 1 0 0 0 0 0 1 1 1 0 0 2 0 0 0 1 0 0 0 7 0 844.46945 P62701;Q8TD47 P62701 149 155 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.048248 90.986 By MS/MS By matching 8.33 0.471 2 1 2 1 3803600 3744400 59249 15856 1165 16734 40622;40623;40624 32464 32464 1 48354 79954 YPEAQSVASDILR RFKILKAECLAMLGRYPEAQSVASDILRMD GRYPEAQSVASDILRMDSTNADALYVRGLC R Y P L R M 2 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 1 0 0 13 0 1447.7307 Q99615 Q99615 192 204 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.0084879 104.59 By MS/MS 6.5 0.5 1 1 2 6148300 6148300 0 15857 2253 16735 40625;40626 32465 32465 1 43843 0 YPEETLSLMTK EARLKFPRLLQIIERYPEETLSLMTKEISS IIERYPEETLSLMTKEISSVPCWQFISWIS R Y P T K E 0 0 0 0 0 0 2 0 0 0 2 1 1 0 1 1 2 0 1 0 0 0 11 0 1310.6428 P78527 P78527 3475 3485 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.3778E-05 155.06 By MS/MS 1.75 0.829 2 1 1 4 603410 603410 0 15858 1225 16736;16737 40627;40628;40629;40630 32466;32467;32468 32467 737 3 154330 0 YPELVLERSLDR DHFSLDVRRGADGNKYPELVLERSLDREEE GNKYPELVLERSLDREEEAVHHLVLVASDG K Y P D R E 0 2 0 1 0 0 2 0 0 0 3 0 0 0 1 1 0 0 1 1 0 0 12 1 1488.7936 Q9Y5H1 Q9Y5H1 191 202 PCDHGA2 Protocadherin gamma-A2 yes yes 2 0.0041845 128.36 By MS/MS 4 0 1 1 1392300 1392300 0 15859 2910 16738 40631 32469 32469 1 131020 0 YPENFFLLR QSLETICLLLAYKIKYPENFFLLRGNHECA LAYKIKYPENFFLLRGNHECASINRIYGFY K Y P L R G 0 1 1 0 0 0 1 0 0 0 2 0 0 2 1 0 0 0 1 0 0 0 9 0 1197.6182 P36873;P62136;P62140 P62136 114 122 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 0.0095404 101.25 By MS/MS 7.5 0.5 1 1 2 246370 246370 0 15860 1139;840;1140 16739 40632;40633 32470;32471;32472 32471 3 3290.8 0 YPLAAAAERPPR GGPEAAPRAPQALERYPLAAAAERPPRLGS LERYPLAAAAERPPRLGSDFGSSRPAASLA R Y P P R L 4 2 0 0 0 0 1 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 12 1 1310.7095 Q7Z5L9 Q7Z5L9 117 128 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.018546 107.21 By MS/MS 5 0 1 1 403960 403960 0 15861 1799 16740 40634 32473 32473 1 4051.5 0 YPQLLPGIR ILDDGGDLTNLIHTKYPQLLPGIRGISEET NLIHTKYPQLLPGIRGISEETTTGVHNLYK K Y P I R G 0 1 0 0 0 1 0 1 0 1 2 0 0 0 2 0 0 0 1 0 0 0 9 0 1055.6128 P23526 P23526 143 151 AHCY Adenosylhomocysteinase yes yes 2 0.0021445 126.67 By MS/MS 7 0 1 1 0 0 0 15862 706 16741 40635 32474 32474 1 0 0 YPSATNNTPAK PEQYQEAFQKLQNIKYPSATNNTPAKQLLL QNIKYPSATNNTPAKQLLLHICHDLTLAVL K Y P A K Q 2 0 2 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 1 0 0 0 11 0 1162.5619 Q8TEQ6 Q8TEQ6 1188 1198 GEMIN5 Gem-associated protein 5 yes yes 2 0.00079306 125.71 By MS/MS 3.5 0.5 1 1 2 894500 894500 0 15863 2002 16742 40636;40637 32475 32475 1 31169 0 YPVNSVNILK AVLAIKYTDIRGQPRYPVNSVNILKAHGRS RGQPRYPVNSVNILKAHGRSQMESMLISGY R Y P L K A 0 0 2 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 2 0 0 10 0 1145.6445 P17987 P17987 190 199 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00074222 128.6 By MS/MS By MS/MS 6 2.83 1 1 1 2 1 1 1 1 8 1 63138000 63022000 116210 15864 648 16743 40638;40639;40640;40641;40642;40643;40644;40645;40646 32476;32477;32478;32479;32480;32481;32482;32483 32481 8 868300 119080 YQAECSQFK ENCNKNKFLDQNLQKYQAECSQFKAKLASL DQNLQKYQAECSQFKAKLASLEELKRQAEL K Y Q F K A 1 0 0 0 1 2 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 9 0 1159.4968 P15924 P15924 1065 1073 DSP Desmoplakin yes yes 2 0.014938 110.87 By MS/MS By MS/MS 3.5 3.1 2 1 1 1 1 4 2 1794000 1617400 176680 15865 628 16744 40647;40648;40649;40650;40651;40652 32484;32485;32486;32487 32484 4 377610 204900 YQAEIPDRLVEGESDNRNQQK KTLLADQGEIRVGCKYQAEIPDRLVEGESD DRLVEGESDNRNQQKMEMKVWDPDNPLTDR K Y Q Q K M 1 2 2 2 0 3 3 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 21 2 2488.1942 O94776 O94776 153 173 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.00011238 111.58 By MS/MS 5 0 1 1 2759400 2759400 0 15866 365 16745 40653 32488 32488 1 27675 0 YQAVTATLEEK KFAYLGRLAHEVGWKYQAVTATLEEKRKEK VGWKYQAVTATLEEKRKEKAKIHYRKKKQL K Y Q E K R 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 0 1251.6347 P40429;Q6NVV1 P40429 149 159 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 2 1.1854E-09 220.82 By MS/MS 8.5 0.5 1 1 2 5015700 5015700 0 15867 859 16746 40654;40655 32489;32490 32489 2 67457 0 YQDILVFR LSLQVEQLLHHRRSRYQDILVFRSKTYGNV LHHRRSRYQDILVFRSKTYGNVLVLDGVIQ R Y Q F R S 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 P19623 P19623 48 55 SRM Spermidine synthase yes yes 2 0.0043113 128.69 By MS/MS 8.5 0.5 1 1 2 1022800 1022800 0 15868 664 16747 40656;40657 32491 32491 1 13541 0 YQDLGAYSSAR EVEQFTQVAKAYQDRYQDLGAYSSARKCLA YQDRYQDLGAYSSARKCLAKQRQRMLQERK R Y Q A R K 2 1 0 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 2 0 0 0 11 0 1229.5677 O96000 O96000 137 147 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 1.6257E-06 182.92 By MS/MS 9 0 1 1 5125300 5125300 0 15869 436 16748 40658 32492 32492 1 100870 0 YQDLGAYSSARK EVEQFTQVAKAYQDRYQDLGAYSSARKCLA QDRYQDLGAYSSARKCLAKQRQRMLQERKA R Y Q R K C 2 1 0 1 0 1 0 1 0 0 1 1 0 0 0 2 0 0 2 0 0 0 12 1 1357.6626 O96000 O96000 137 148 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.0075734 113.67 By MS/MS 9 0 1 1 0 0 0 15870 436 16749 40659 32493 32493 1 0 0 YQDVDSETFISTR SPEEVADKVLNAIKRYQDVDSETFISTRHV KRYQDVDSETFISTRHVWPEDCEQKVSAKF R Y Q T R H 0 1 0 2 0 1 1 0 0 1 0 0 0 1 0 2 2 0 1 1 0 0 13 0 1559.7104 Q8IYQ7 Q8IYQ7 223 235 THNSL1 Threonine synthase-like 1 yes yes 2 6.4154E-25 290.28 By MS/MS 5 0 1 1 2510100 2510100 0 15871 1888 16750 40660 32494 32494 1 25175 0 YQEAAPNVANNTGPHAASCFGAK NLSYQVHREIPQAERYQEAAPNVANNTGPH ANNTGPHAASCFGAKKGKDEWFSRGKKPIE R Y Q A K K 6 0 3 0 1 1 1 2 1 0 0 1 0 1 2 1 1 0 1 1 0 0 23 0 2374.076 O60716 O60716 600 622 CTNND1 Catenin delta-1 yes yes 3 0.0068346 72.383 By MS/MS 4.5 0.5 1 1 2 2655100 2655100 0 15872 272 16751 40661;40662 32495 32495 1 204120 0 YQEALHLGSQLLR ALEARLVSLYFDTKRYQEALHLGSQLLREL KRYQEALHLGSQLLRELKKMDDKALLVEVQ R Y Q L R E 1 1 0 0 0 2 1 1 1 0 4 0 0 0 0 1 0 0 1 0 0 0 13 0 1526.8205 O00231 O00231 143 155 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2;3 0.00025256 150.49 By MS/MS 7 0 2 2 3515400 3515400 0 15873 93 16752 40663;40664 32496;32497 32497 2 55185 0 YQEALSELATAVK ARYGTGVFGQNEYLRYQEALSELATAVKAR LRYQEALSELATAVKARIGSSQRHHQSAAK R Y Q V K A 3 0 0 0 0 1 2 0 0 0 2 1 0 0 0 1 1 0 1 1 0 0 13 0 1421.7402 Q9BWL3 Q9BWL3 179 191 C1orf43 Uncharacterized protein C1orf43 yes yes 2 0.00071187 131.32 By MS/MS 8 0 1 1 501270 501270 0 15874 2351 16753 40665 32498 32498 1 6328.5 0 YQEEVPVYVPK PQVFAPLSEESKNKKYQEEVPVYVPKWMPF KNKKYQEEVPVYVPKWMPFKELMMMLQASL K Y Q P K W 0 0 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 0 2 3 0 0 11 0 1349.6867 O43264 O43264 709 719 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.00013392 148.91 By MS/MS 4 0 1 1 3496700 3496700 0 15875 200 16754 40666 32499 32499 1 329060 0 YQELQITAGR AQRSKDEAEALYQTKYQELQITAGRHGDDL LYQTKYQELQITAGRHGDDLKNSKMEIAEL K Y Q G R H 1 1 0 0 0 2 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1177.6091 CON__Q7Z794;Q7Z794 CON__Q7Z794 361 370 KRT77 Keratin, type II cytoskeletal 1b yes no 2 0.004162 121.61 By MS/MS 2.5 0.5 1 1 2 364850 0 364850 + 15876 72 16755 40667;40668 32500 32500 1 0 176290 YQEQLVQEQELAK VDKQLASELEYDMKKYQEQLVQEQELAKHA KKYQEQLVQEQELAKHADVAGTAGGAEVAP K Y Q A K H 1 0 0 0 0 4 3 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 13 0 1604.8046 P42695 P42695 1259 1271 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 1.2595E-08 224.25 By MS/MS 3 0.816 1 1 1 3 1212600 1212600 0 15877 885 16756 40669;40670;40671 32501 32501 1 88658 0 YQFDPNLGIR QLAPFLPQLVPRLYRYQFDPNLGIRQAMTS PRLYRYQFDPNLGIRQAMTSIWNALVTDKS R Y Q I R Q 0 1 1 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1221.6142 Q5VYK3 Q5VYK3 1130 1139 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0052008 102.06 By MS/MS 2.5 0.5 1 1 2 1520300 1520300 0 15878 1656 16757 40672;40673 32502 32502 1 474700 0 YQFLEEAFQNQK LTCRDCQLLEHKEHRYQFLEEAFQNQKGAI EHRYQFLEEAFQNQKGAIENLLAKLLEKKN R Y Q Q K G 1 0 1 0 0 3 2 0 0 0 1 1 0 2 0 0 0 0 1 0 0 0 12 0 1543.7307 Q9UPN9 Q9UPN9 309 320 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.00028065 145.23 By MS/MS 3.5 0.5 1 1 2 220360 220360 0 15879 2800 16758 40674;40675 32503;32504 32503 2 14060 0 YQGTILSIDDNLQR KNKVTKEQYNMLGGKYQGTILSIDDNLQRT KYQGTILSIDDNLQRTCTGTININIQSFGN K Y Q Q R T 0 1 1 2 0 2 0 1 0 2 2 0 0 0 0 1 1 0 1 0 0 0 14 0 1634.8264 Q02413 Q02413 460 473 DSG1 Desmoglein-1 yes yes 2 9.9355E-22 250.51 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 858420 305730 552680 15880 1277 16759 40676;40677 32505;32506 32505 1 28771 70349 YQGVNLYIK LKRKFEQLKQERISRYQGVNLYIKNLDDTI QERISRYQGVNLYIKNLDDTIDDEKLRKEF R Y Q I K N 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 2 1 0 0 9 0 1096.5917 Q13310 Q13310 291 299 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.0016088 126.28 By MS/MS 5 0 1 1 4363600 4363600 0 15881 1369 16760 40678 32507 32507 1 43765 0 YQGVNLYVK LKRKFEQMKQDRITRYQGVNLYVKNLDDGI QDRITRYQGVNLYVKNLDDGIDDERLRKEF R Y Q V K N 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 2 2 0 0 9 0 1082.576 P11940;Q4VXU2 P11940 291 299 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like yes no 2 0.00066887 152.47 By MS/MS 6 1.41 1 1 1 1 1 5 25671000 25671000 0 15882 586 16761 40679;40680;40681;40682;40683 32508;32509 32508 2 280060 0 YQIDDKPNNQIR IIPRGHRRGRIDDLRYQIDDKPNNQIRISK DLRYQIDDKPNNQIRISKQLAEFVPLDYSV R Y Q I R I 0 1 2 2 0 2 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 0 12 1 1502.7478 Q9NP92 Q9NP92 231 242 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 2 0.017955 107.55 By MS/MS 6 0 1 1 889790 889790 0 15883 2528 16762 40684 32510 32510 1 6116.6 0 YQIDPDACFSAK WTAGNSNTRFGIAAKYQIDPDACFSAKVNN AAKYQIDPDACFSAKVNNSSLIGLGYTQTL K Y Q A K V 2 0 0 2 1 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 0 0 12 0 1413.6235 P21796 P21796 225 236 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 0.00052219 138.42 By MS/MS 7.5 0.5 1 1 2 7790100 7790100 0 15884 681 16763 40685;40686 32511 32511 1 99589 0 YQIFIPMVNK AMDTLSSLVFQLGKKYQIFIPMVNKVLVRH QLGKKYQIFIPMVNKVLVRHRINHQRYDVL K Y Q N K V 0 0 1 0 0 1 0 0 0 2 0 1 1 1 1 0 0 0 1 1 0 0 10 0 1251.6686 P42345 P42345 1188 1197 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.028447 82.279 By MS/MS 2 0 1 1 96753 96753 0 15885 879 16764 40687 32512 32512 464 1 32726 0 YQLDPTASISAK WTSGTNCTRFGIAAKYQLDPTASISAKVNN AAKYQLDPTASISAKVNNSSLIGVGYTQTL K Y Q A K V 2 0 0 1 0 1 0 0 0 1 1 1 0 0 1 2 1 0 1 0 0 0 12 0 1292.6612 P45880 P45880 236 247 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 5.3696E-05 166.29 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 18948000 18793000 154510 15886 903 16765 40688;40689;40690;40691 32513;32514;32515 32514 3 254420 208500 YQNLLNEFSR ETKQLELDLNDERLRYQNLLNEFSRLEERY DERLRYQNLLNEFSRLEERYDDLKEEMTLM R Y Q S R L 0 1 2 0 0 1 1 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 10 0 1282.6306 Q9Y4I1 Q9Y4I1 1078 1087 MYO5A Unconventional myosin-Va yes yes 2 0.038624 101.9 By MS/MS 2 0 1 1 0 0 0 15887 2896 16766 40692 32516 32516 1 0 0 YQPCLPSTQEDVINK SCTEGKGEYTMEYSRYQPCLPSTQEDVINK YQPCLPSTQEDVINKYLEATGQLPVKKGKA R Y Q N K Y 0 0 1 1 1 2 1 0 0 1 1 1 0 0 2 1 1 0 1 1 0 0 15 0 1790.8509 Q96RP9 Q96RP9 720 734 GFM1 Elongation factor G, mitochondrial yes yes 2 0.029621 78.548 By MS/MS 5 0 1 1 2201700 2201700 0 15888 2223 16767 40693 32517 32517 0 22082 0 YQPLASTASDNDFVTPEPR SQRAPSAKKPSTGSRYQPLASTASDNDFVT ASTASDNDFVTPEPRRTTRRHPNTQQRASK R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2 0.00013171 149.6 By MS/MS 3.5 0.5 1 1 2 769920 769920 0 15889 1474 16768 40694;40695 32518 32518 1 47720 0 YQQAGLPLIVLAGK LPSGEILDVFDAAERYQQAGLPLIVLAGKE RYQQAGLPLIVLAGKEYGAGSSRDWAAKGP R Y Q G K E 2 0 0 0 0 2 0 2 0 1 3 1 0 0 1 0 0 0 1 1 0 0 14 0 1469.8606 P21399 P21399 759 772 ACO1 Cytoplasmic aconitate hydratase yes yes 2 0.0055176 102.52 By MS/MS 4 0 1 1 69247 69247 0 15890 679 16769 40696 32519 32519 1 6516.6 0 YQQFKDFQR IAIHRGMAQEERLSRYQQFKDFQRRILVAT EERLSRYQQFKDFQRRILVATNLFGRGMDI R Y Q Q R R 0 1 0 1 0 3 0 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 9 1 1258.6095 O00148;Q13838 O00148 329 337 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2;3 0.03296 98.582 By MS/MS 6.33 0.471 2 1 3 4264600 4264600 0 15891 83 16770 40697;40698;40699 32520;32521 32521 2 30278 0 YQQFPEFK KPPTSQEEWEAEFQRYQQFPEFKILNHDMT WEAEFQRYQQFPEFKILNHDMTLTEFKFIW R Y Q F K I 0 0 0 0 0 2 1 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 8 0 1085.5182 Q7KZN9 Q7KZN9 124 131 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes yes 2 0.011142 119.41 By MS/MS 1 0 1 1 583170 583170 0 15892 1757 16771 40700 32522 32522 1 140530 0 YQQGDFGYCPR RYILTNRGIAQMLEKYQQGDFGYCPRVYCE MLEKYQQGDFGYCPRVYCENQPMLPIGLSD K Y Q P R V 0 1 0 1 1 2 0 2 0 0 0 0 0 1 1 0 0 0 2 0 0 0 11 0 1389.5772 P67870 P67870 101 111 CSNK2B Casein kinase II subunit beta yes yes 2 0.001625 112.83 By MS/MS 8 0 1 1 2018700 2018700 0 15893 1208 16772 40701 32523 32523 1 25486 0 YQQLFEDIR LKKLILSKGKTPALKYQQLFEDIRGQSDIA KTPALKYQQLFEDIRGQSDIAITKDMFEEA K Y Q I R G 0 1 0 1 0 2 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 9 0 1210.5982 P33991 P33991 820 828 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.010359 99.815 By MS/MS 4 0 1 1 862950 862950 0 15894 806 16773 40702 32524 32524 1 81210 0 YQSAPSQAPGNTIER MGRYRNSSWYSSGSRYQSAPSQAPGNTIER YQSAPSQAPGNTIERGQTHSAGTNGTGVSM R Y Q E R G 2 1 1 0 0 2 1 1 0 1 0 0 0 0 2 2 1 0 1 0 0 0 15 0 1617.7747 Q86XZ4 Q86XZ4 488 502 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 2 0.000185 177.36 By MS/MS 5 0 1 1 335170 335170 0 15895 1848 16774 40703 32525 32525 1 3361.6 0 YQTEQSLR QIDNAKLAADDFRTKYQTEQSLRQLVESDI ADDFRTKYQTEQSLRQLVESDINSLRRILD K Y Q L R Q 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 8 0 1023.4985 CON__O76011;CON__Q8IUT8;O76011;CON__Q14525;Q14525 CON__Q14525 145 152 KRT34;KRT33B Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha3-II no no 2 0.016304 114.5 By MS/MS 10 0 1 1 327100 0 327100 + 15896 59;36 16775 40704 32526;32527 32527 2 0 418780 YQTVIADICRR DFPTISLEFRNLAEKYQTVIADICRRMGIG LAEKYQTVIADICRRMGIGMAEFLDKHVTS K Y Q R R M 1 2 0 1 1 1 0 0 0 2 0 0 0 0 0 0 1 0 1 1 0 0 11 1 1393.7136 P37268 P37268 139 149 FDFT1 Squalene synthase yes yes 2;3 0.0068263 109.29 By MS/MS 7 0 2 2 2245200 2245200 0 15897 845 16776 40705;40706 32528;32529 32529 2 35246 0 YQVEYDAYK CTLYGISWQFDPCCKYQVEYDAYKLSRLPL FDPCCKYQVEYDAYKLSRLPLHTLTSSTPV K Y Q Y K L 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 3 1 0 0 9 0 1177.5292 P17152 P17152 134 142 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.00070385 140.45 By MS/MS 9 0 1 1 1775000 1775000 0 15898 640 16777 40707 32530 32530 1 34932 0 YQVSWSLDHK GGKQFPVTRGQDVGRYQVSWSLDHKSAHAG QDVGRYQVSWSLDHKSAHAGTYEVRFFDEE R Y Q H K S 0 0 0 1 0 1 0 0 1 0 1 1 0 0 0 2 0 1 1 1 0 0 10 0 1261.6091 P51571 P51571 86 95 SSR4 Translocon-associated protein subunit delta yes yes 2 0.0075918 103.26 By MS/MS 9.5 0.5 1 1 2 1397500 1397500 0 15899 998 16778 40708;40709 32531 32531 1 60305 0 YQYCDFLVK FQSAKASKIETRGTRYQYCDFLVKVGTVTM ETRGTRYQYCDFLVKVGTVTMGPSARGISV R Y Q V K V 0 0 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 0 2 1 0 0 9 0 1234.5692 Q9H944 Q9H944 117 125 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 2 0.049645 76.1 By MS/MS 9 0 1 1 205590 205590 0 15900 2481 16779 40710 32532 32532 1 4046 0 YQYLSAAYSPVTTDTQR AVEMYIEDWVIVHRRYQYLSAAYSPVTTDT YLSAAYSPVTTDTQRERQKGLPRQVFEQDA R Y Q Q R E 2 1 0 1 0 2 0 0 0 0 1 0 0 0 1 2 3 0 3 1 0 0 17 0 1962.9323 Q96HP0 Q96HP0 127 143 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0003245 171.81 By MS/MS 2 0 1 1 220040 220040 0 15901 2166 16780 40711 32533 32533 1 74426 0 YRDELKR RQYRVGTDRTGFTFKYRDELKRHYNLGEYW DRTGFTFKYRDELKRHYNLGEYWIEVEMED K Y R K R H 0 2 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 2 978.52468 P33992 P33992 55 61 MCM5 DNA replication licensing factor MCM5 yes yes 3 0.048938 93.195 By MS/MS 4 0 1 1 1559500 1559500 0 15902 807 16781 40712 32534 32534 1 146760 0 YRDVSPFDHSR PCRVAKLPKNKNRNRYRDVSPFDHSRIKLH NRNRYRDVSPFDHSRIKLHQEDNDYINASL R Y R S R I 0 2 0 2 0 0 0 0 1 0 0 0 0 1 1 2 0 0 1 1 0 0 11 1 1377.6426 P18031 P18031 46 56 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 3 0.0056729 120.03 By MS/MS 7 0.816 1 1 1 3 6361100 6361100 0 15903 649 16782 40713;40714;40715 32535 32535 1 49609 0 YRGIGDCVR VKTQLQLDERSHPPRYRGIGDCVRQTVRSH RSHPPRYRGIGDCVRQTVRSHGVLGLYRGL R Y R V R Q 0 2 0 1 1 0 0 2 0 1 0 0 0 0 0 0 0 0 1 1 0 0 9 1 1094.5291 P53007 P53007 64 72 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.0085421 108.98 By MS/MS 8 0 1 1 741940 741940 0 15904 1026 16783 40716 32536 32536 1 9366.9 0 YRGKEDAGK MIKYRYIPFTHGKRRYRGKEDAGKAFAS__ THGKRRYRGKEDAGKAFAS___________ R Y R G K A 1 1 0 1 0 0 1 2 0 0 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1022.5145 O15258 O15258 184 192 RER1 Protein RER1 yes yes 2 0.018698 100.02 By MS/MS 2 0 1 1 0 0 0 15905 175 16784 40717 32537 32537 1 0 0 YRPGTVALR RKSAPATGGVKKPHRYRPGTVALREIRRYQ VKKPHRYRPGTVALREIRRYQKSTELLIRK R Y R L R E 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 1 0 0 9 1 1031.5876 Q71DI3;Q16695;P84243;P68431;Q6NXT2 Q71DI3 42 50 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 3 0.017145 85.862 By MS/MS 10 0 1 1 391240 391240 0 15906 1215 16785 40718 32538 32538 1 21086 0 YRQFPQLTR GGVRHAGGGVHIEPRYRQFPQLTRSQVFQS VHIEPRYRQFPQLTRSQVFQSEFFSGLMWF R Y R T R S 0 2 0 0 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 9 1 1207.6462 O95178 O95178 44 52 NDUFB2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial yes yes 2 0.046559 101.46 By MS/MS 10 0 1 1 271260 271260 0 15907 391 16786 40719 32539 32539 1 14620 0 YRRLDLFQEHMFEVLER PLTFDIIRKNVENNRYRRLDLFQEHMFEVL RLDLFQEHMFEVLERARRMNRTDSEIYEDA R Y R E R A 0 3 0 1 0 1 3 0 1 0 3 0 1 2 0 0 0 0 1 1 0 0 17 2 2280.1474 Q86U86 Q86U86 834 850 PBRM1 Protein polybromo-1 yes yes 3 0.057632 68.329 By MS/MS 6 0 1 1 0 0 0 15908 1817 16787 40720 32540 32540 1 0 0 YSALFLGVAYGATR MVPPVQVSPLIKLGRYSALFLGVAYGATRY RYSALFLGVAYGATRYNYLKPRAEEERRIA R Y S T R Y 3 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 1 0 2 1 0 0 14 0 1487.7773 P56385 P56385 16 29 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.00041661 162.49 By MS/MS 10 0 1 1 147480 147480 0 15909 1072 16788 40721 32541;32542 32541 2 7948.6 0 YSDADIEPFLK NTKEGLAELYEYKKKYSDADIEPFLKNSSQ YKKKYSDADIEPFLKNSSQFFQSYVERGLR K Y S L K N 1 0 0 2 0 0 1 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 11 0 1296.6238 Q14008 Q14008 1860 1870 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.267E-07 200.56 By MS/MS 3 0.816 1 1 1 3 2088900 2088900 0 15910 1417 16789 40722;40723;40724 32543;32544 32543 2 606950 0 YSDIDIILLK RHLPKLIPVLVNGMKYSDIDIILLKGDVEE VNGMKYSDIDIILLKGDVEEDETIPDSEQD K Y S L K G 0 0 0 2 0 0 0 0 0 3 2 1 0 0 0 1 0 0 1 0 0 0 10 0 1191.6751 Q92973 Q92973 318 327 TNPO1 Transportin-1 yes yes 2 0.00019448 147.51 By MS/MS 5.33 1.25 1 1 1 3 634730 634730 0 15911 2082 16790 40725;40726;40727 32545;32546;32547 32545 3 53297 0 YSDPQIK NMVHNLLSSHDSDPRYSDPQIKARVAMLYL SSHDSDPRYSDPQIKARVAMLYLPLIGIIM R Y S I K A 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 7 0 849.42323 Q96N67 Q96N67 1229 1235 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.048731 90.777 By MS/MS 2.5 0.5 1 1 2 1938300 1938300 0 15912 2201 16791 40728;40729 32548 32548 1 535310 0 YSDSLVQK GNWAHSGFPEIAFGRYSDSLVQKGYKVARV PEIAFGRYSDSLVQKGYKVARVEQTETPEM R Y S Q K G 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 2 0 0 1 1 0 0 8 0 938.47091 P52701 P52701 469 476 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.0039801 130.22 By MS/MS 3 0.816 1 1 1 3 702830 702830 0 15913 1020 16792 40730;40731;40732 32549 32549 1 27172 0 YSEEVLAVFK PVQCYEKISWKTFLKYSEEVLAVFKSYKLD KTFLKYSEEVLAVFKSYKLDDTQASRKKME K Y S F K S 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 1 2 0 0 10 0 1183.6125 Q96FV9 Q96FV9 263 272 THOC1 THO complex subunit 1 yes yes 2 0.021977 85.862 By MS/MS 5 0 1 1 430510 430510 0 15914 2154 16793 40733 32550 32550 1 4317.8 0 YSEHTQLQTQQR GAEGVDHPSHTLQHRYSEHTQLQTQQRAVQ QHRYSEHTQLQTQQRAVQEAIQVKLNEFEQ R Y S Q R A 0 1 0 0 0 4 1 0 1 0 1 0 0 0 0 1 2 0 1 0 0 0 12 0 1517.7223 Q96Q15 Q96Q15 2536 2547 SMG1 Serine/threonine-protein kinase SMG1 yes yes 3 0.0017175 144.7 By MS/MS 1.5 0.5 1 1 2 530880 530880 0 15915 2213 16794 40734;40735 32551 32551 1 162050 0 YSELTTVQQQLIR KFFCFQVLEHQVKYKYSELTTVQQQLIRET YKYSELTTVQQQLIRETLISWLQAQMLNPQ K Y S I R E 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 1 2 0 1 1 0 0 13 0 1577.8413 O43592 O43592 68 80 XPOT Exportin-T yes yes 2 1.8152E-11 232.88 By MS/MS 4 0 1 1 1743300 1743300 0 15916 220 16795 40736 32552 32552 1 164050 0 YSFLQFDPAPR CGNQAAIMELDDTLKYSFLQFDPAPRRGEP DTLKYSFLQFDPAPRRGEPHVTRRTPDYFL K Y S P R R 1 1 0 1 0 1 0 0 0 0 1 0 0 2 2 1 0 0 1 0 0 0 11 0 1339.6561 P67775;P62714 P67775 284 294 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 1.1832E-05 190.57 By MS/MS 7.5 0.5 1 1 2 1045800 1045800 0 15917 1166 16796 40737;40738 32553;32554 32554 2 14132 0 YSGAYGASVSDEELK DRMKESSPSGSKSQRYSGAYGASVSDEELK YSGAYGASVSDEELKRRVAEELALEQAKKE R Y S L K R 2 0 0 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 2 1 0 0 15 0 1574.71 Q9NX63 Q9NX63 49 63 CHCHD3 MICOS complex subunit MIC19 yes yes 2 7.5056E-33 342.32 By MS/MS 8 0 1 1 3363500 3363500 0 15918 2621 16797 40739 32555 32555 1 42464 0 YSGDQILIR ILPVVVGSWWYRSIRYSGDQILIRTTQIYT WYRSIRYSGDQILIRTTQIYTYFVYKTRNM R Y S I R T 0 1 0 1 0 1 0 1 0 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1063.5662 Q9UGP8 Q9UGP8 218 226 SEC63 Translocation protein SEC63 homolog yes yes 2 0.0011886 131.62 By MS/MS 5.5 1.12 1 1 1 1 4 4289300 4289300 0 15919 2724 16798 40740;40741;40742;40743 32556 32556 1 298800 0 YSGETVQER LLGTPVGGLLMAFQKYSGETVQERKQKDRK LMAFQKYSGETVQERKQKDRKALHELKLEE K Y S E R K 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 9 0 1067.4884 Q9NPL8 Q9NPL8 212 220 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 4.6553E-05 172.25 By MS/MS 8 0 1 1 3581500 3581500 0 15920 2534 16799 40744 32557 32557 1 45216 0 YSGGNYRDNYDN RSRDYNGRNQGGYDRYSGGNYRDNYDN___ YDRYSGGNYRDNYDN_______________ R Y S D N - 0 1 3 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 3 0 0 0 12 1 1436.5593 P98179 P98179 146 157 RBM3 RNA-binding protein 3 yes yes 2 0.00060563 155.53 By MS/MS 10 0 1 1 173360 173360 0 15921 1253 16800 40745 32558 32558 1 9343.4 0 YSGNPLDPPLR SENFRVIALGLPVPRYSGNPLDPPLRSRFQ PVPRYSGNPLDPPLRSRFQARDIYYLPFKD R Y S L R S 0 1 1 1 0 0 0 1 0 0 2 0 0 0 3 1 0 0 1 0 0 0 11 0 1227.6248 A3KMH1 A3KMH1 248 258 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0062815 110.54 By MS/MS 2 0 1 1 0 0 0 15922 14 16801 40746 32559 32559 1 0 0 YSGSYNDYLR LDYRRLPDAHSDYARYSGSYNDYLRAAQMH SDYARYSGSYNDYLRAAQMHSGYQRRM___ R Y S L R A 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 3 0 0 0 10 0 1236.5411 Q96PK6 Q96PK6 648 657 RBM14 RNA-binding protein 14 yes yes 2 0.019865 86.882 By MS/MS 5 0 1 1 730840 730840 0 15923 2210 16802 40747 32560 32560 1 7329.9 0 YSGTLNLDR ENQTPEFFQDVCKPKYSGTLNLDRVTREAC DVCKPKYSGTLNLDRVTREACPELDYFVVF K Y S D R V 0 1 1 1 0 0 0 1 0 0 2 0 0 0 0 1 1 0 1 0 0 0 9 0 1037.5142 P49327 P49327 1996 2004 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.7675E-05 168.26 By MS/MS 3 1.41 1 1 1 1 1 5 37057000 37057000 0 15924 946 16803 40748;40749;40750;40751;40752 32561;32562;32563;32564;32565 32563 5 7957200 0 YSHEVLSEENFK LGRCNYSQSERNLCKYSHEVLSEENFKVLK LCKYSHEVLSEENFKVLKNHELSGLNKEEL K Y S F K V 0 0 1 0 0 0 3 0 1 0 1 1 0 1 0 2 0 0 1 1 0 0 12 0 1480.6834 Q7Z2W4 Q7Z2W4 108 119 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 0.00027952 142.19 By MS/MS 5 0.816 1 1 1 3 8071000 8071000 0 15925 1778 16804 40753;40754;40755 32566;32567 32566 2 599650 0 YSHLQPGDHLTDITLK HKFHVDISLTDFIQKYSHLQPGDHLTDITL SHLQPGDHLTDITLKVAGRIHAKRASGGKL K Y S L K V 0 0 0 2 0 1 0 1 2 1 3 1 0 0 1 1 2 0 1 0 0 0 16 0 1836.937 Q15046 Q15046 112 127 KARS Lysine--tRNA ligase yes yes 3 0.0042893 140.03 By MS/MS 5 0 1 1 4370600 4370600 0 15926 1481 16805 40756 32568 32568 1 43835 0 YSHVQEVQER DHEDYDPQTVRLGSRYSHVQEVQERLNFLR RLGSRYSHVQEVQERLNFLRFLLKDGQLWL R Y S E R L 0 1 0 0 0 2 2 0 1 0 0 0 0 0 0 1 0 0 1 2 0 0 10 0 1273.6051 Q93008;O00507 Q93008 648 657 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2;3 2.9787E-05 161.51 By MS/MS 3.25 1.39 1 2 1 2 2 8 8014600 8014600 0 15927 2085 16806 40757;40758;40759;40760;40761;40762;40763;40764 32569;32570;32571;32572;32573;32574 32570 6 1755900 0 YSILQQTPR ATDRDEPDTMHTRLKYSILQQTPRSPGLFS MHTRLKYSILQQTPRSPGLFSVHPSTGVIT K Y S P R S 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 9 0 1104.5928 Q14574 Q14574 282 290 DSC3 Desmocollin-3 yes yes 2 0.00013504 169.65 By matching By MS/MS 3.5 0.5 1 1 1 1 666610 444430 222180 15928 1446 16807 40765;40766 32575 32575 1 41824 28281 YSLDPENPTK ______________________________ ______________________________ R Y S T K S 0 0 1 1 0 0 1 0 0 0 1 1 0 0 2 1 1 0 1 0 0 0 10 0 1162.5506 P18621 P18621 4 13 RPL17 60S ribosomal protein L17 yes yes 2 0.0019915 112.36 By MS/MS 9 0 1 1 1983100 1983100 0 15929 654 16808 40767 32576 32576 1 39029 0 YSLENTLTESEAR VNALEIELQAQHNLRYSLENTLTESEARYS LRYSLENTLTESEARYSSQLSQVQSLITNV R Y S A R Y 1 1 1 0 0 0 3 0 0 0 2 0 0 0 0 2 2 0 1 0 0 0 13 0 1511.7104 CON__Q14525;Q14525 CON__Q14525 294 306 KRT33B Keratin, type I cuticular Ha3-II yes no 2 3.4481E-06 181.4 By MS/MS 10 0 1 1 196410 0 196410 + 15930 59 16809 40768 32577 32577 1 0 251460 YSLEPVAVELK MSHLGRPDGVPMPDKYSLEPVAVELKSLLG MPDKYSLEPVAVELKSLLGKDVLFLKDCVG K Y S L K S 1 0 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 2 0 0 11 0 1246.6809 P00558 P00558 76 86 PGK1 Phosphoglycerate kinase 1 yes yes 2 3.7307E-07 198.72 By MS/MS 7 0 1 1 1105200 1105200 0 15931 447 16810 40769 32578 32578 1 17350 0 YSLVIIPK AQSAVLMATGFIWSRYSLVIIPKNWSLFAV TGFIWSRYSLVIIPKNWSLFAVNFFVGAAG R Y S P K N 0 0 0 0 0 0 0 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 8 0 931.57425 O95563 O95563 85 92 MPC2 Mitochondrial pyruvate carrier 2 yes yes 2 0.0075464 113.7 By MS/MS 10 0 1 1 449900 449900 0 15932 416 16811 40770 32579 32579 1 24248 0 YSNENLDLAR TRNYLDWLTSIPWGKYSNENLDLARAQAVL IPWGKYSNENLDLARAQAVLEEDHYGMEDV K Y S A R A 1 1 2 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 10 0 1193.5677 P36776 P36776 473 482 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.0011545 120.63 By MS/MS 4 0 1 1 2000100 2000100 0 15933 839 16812 40771 32580 32580 1 188220 0 YSNSEVVTGSGR QIREDHMRFISELARYSNSEVVTGSGRQEA LARYSNSEVVTGSGRQEAQKTDAEYRKLFD R Y S G R Q 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 3 1 0 1 2 0 0 12 0 1254.584 Q7L576 Q7L576 366 377 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 4.5104E-07 202 By MS/MS 3 0 1 1 459360 459360 0 15934 1763 16813 40772 32581 32581 1 8405.1 0 YSPTSPTYSPTSPK TYSPTSPVYTPTSPKYSPTSPTYSPTSPKY KYSPTSPTYSPTSPKYSPTSPTYSPTSPKG K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.00034526 166.29 By MS/MS 2 0 1 1 740850 740850 0 15935 717 16814 40773 32582 32582 1 250590 0 YSPTSPTYSPTTPK KYSPTSPKYSPTSPKYSPTSPTYSPTTPKY KYSPTSPTYSPTTPKYSPTSPTYSPTSPVY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.037608 73.632 By MS/MS 2 0 1 1 315430 315430 0 15936 717 16815 40774 32583 32583 1 106690 0 YSQICAK ______________________________ QAGLSYIRYSQICAKAVRDALKTEFKANAE R Y S A K A 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 7 0 868.41129 P56381;Q5VTU8 P56381 15 21 ATP5E;ATP5EP2 ATP synthase subunit epsilon, mitochondrial;ATP synthase subunit epsilon-like protein, mitochondrial yes no 2 0.0088894 139.68 By MS/MS By matching 10 0 2 1 1 3080200 3011200 69076 15937 1071 16816 40775;40776 32584 32584 1 162290 88437 YSQVLANGLDNK PDWFLNRQKDVKDGKYSQVLANGLDNKLRE DGKYSQVLANGLDNKLREDLERLKKIRAHR K Y S N K L 1 0 2 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1320.6674 P62269 P62269 95 106 RPS18 40S ribosomal protein S18 yes yes 2 9.0342E-13 240 By MS/MS 9.5 0.5 1 1 2 31945000 31945000 0 15938 1149 16817 40777;40778 32585;32586 32586 2 774850 0 YSQYQQAIYK LESQTYEVFEKDPIKYSQYQQAIYKCLLDR KDPIKYSQYQQAIYKCLLDRVPEEEKDTNV K Y S Y K C 1 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 3 0 0 0 10 0 1290.6245 O14744 O14744 334 343 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 1.4691E-07 187.22 By MS/MS By MS/MS 6.2 1.17 2 1 1 1 3 2 3912700 3014200 898470 15939 137 16818 40779;40780;40781;40782;40783 32587;32588;32589;32590 32590 4 32537 775420 YSSLNLFDTYK SDRSGPTAKGKDGKKYSSLNLFDTYKGKSL DGKKYSSLNLFDTYKGKSLEIQKPAVAPRH K Y S Y K G 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 2 1 0 2 0 0 0 11 0 1349.6503 P48634 P48634 17 27 PRRC2A Protein PRRC2A yes yes 2 0.0045274 105.17 By MS/MS 2 0 1 1 153890 153890 0 15940 938 16819 40784 32591 32591 1 52051 0 YSSLQLNCEYR SEFKQIYKGPDSSFRYSSLQLNCEYRFRVC SSFRYSSLQLNCEYRFRVCAIRQCQDSLGH R Y S Y R F 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 2 0 0 2 0 0 0 11 0 1431.6453 Q9Y2H6 Q9Y2H6 1105 1115 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 1.4279E-05 169.21 By MS/MS 3 0 1 1 442860 442860 0 15941 2828 16820 40785 32592 32592 1 8103.1 0 YSSSKHYSSSR ______________________________ MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG R Y S S R S 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 6 0 0 2 0 0 0 11 1 1287.5844 CON__P13645;P13645 CON__P13645 5 15 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3;4 2.885E-12 179.42 By MS/MS By MS/MS 4.97 2.97 5 5 4 3 3 3 3 3 3 3 13 22 14475000 3652600 10823000 + 15942 50 16821 40786;40787;40788;40789;40790;40791;40792;40793;40794;40795;40796;40797;40798;40799;40800;40801;40802;40803;40804;40805;40806;40807;40808;40809;40810;40811;40812;40813;40814;40815;40816;40817;40818;40819;40820 32593;32594;32595;32596;32597;32598;32599;32600;32601;32602;32603;32604;32605;32606;32607;32608;32609;32610;32611;32612;32613;32614;32615;32616;32617;32618 32608 26 335620 12741000 YSTDVSVDEVK AQHSQHRTPCKGGIRYSTDVSVDEVKALAS GGIRYSTDVSVDEVKALASLMTYKCAVVDV R Y S V K A 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 1 3 0 0 11 0 1240.5823 P00367;P49448 P00367 152 162 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 2.357E-05 160.53 By MS/MS By matching 7.33 0.943 1 2 2 1 5679500 5627000 52488 15943 441 16822 40821;40822;40823 32619;32620 32619 2 40858 70830 YSTPTYTGGQSESHVQSASEDTVTER RTDAPLMQFKSILLKYSTPTYTGGQSESHV ESHVQSASEDTVTERVEMSVNDKAEASGCR K Y S E R V 1 1 0 1 0 2 3 2 1 0 0 0 0 0 1 5 5 0 2 2 0 0 26 0 2816.2373 Q7Z2T5 Q7Z2T5 691 716 TRMT1L TRMT1-like protein yes yes 3 0.043287 51.232 By MS/MS 4 0 1 1 638940 638940 0 15944 1777 16823 40824 32621 32621 1 60129 0 YSTSGSSGLTTGK LCGKFVLRPLRPCRRYSTSGSSGLTTGKIA RRYSTSGSSGLTTGKIAGAGLLFVGGGIGG R Y S G K I 0 0 0 0 0 0 0 3 0 0 1 1 0 0 0 4 3 0 1 0 0 0 13 0 1244.5885 Q16891 Q16891 33 45 IMMT MICOS complex subunit MIC60 yes yes 2 0.00024438 158.08 By MS/MS By MS/MS 4 0 2 1 1 2334000 2288300 45759 15945 1563 16824 40825;40826 32622;32623 32623 2 215340 97497 YSVDIPLDK SFVKVYNYNHLMPTRYSVDIPLDKTVVNKD HLMPTRYSVDIPLDKTVVNKDVFRDPALKR R Y S D K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 9 0 1048.5441 P61353 P61353 85 93 RPL27 60S ribosomal protein L27 yes yes 2 0.0012025 131.44 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 8265900 8201500 64356 15946 1122 16825 40827;40828;40829 32624;32625;32626 32626 3 272980 146750 YSVINEINK FEDGIRSAQLIASAKYSVINEINKIRENED LIASAKYSVINEINKIRENEDRIFVYFITK K Y S N K I 0 0 2 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 1 1 0 0 9 0 1078.5659 Q63HN8 Q63HN8 3396 3404 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.041185 89.698 By MS/MS 1.5 0.5 1 1 2 0 0 0 15947 1664 16826 40830;40831 32627;32628 32628 2 0 0 YSVLLPTYNER RSRRELEVRSPRQNKYSVLLPTYNERENLP RQNKYSVLLPTYNERENLPLIVWLLVKSFS K Y S E R E 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 1 1 0 2 1 0 0 11 0 1353.6929 O60762 O60762 27 37 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0037552 107.21 By MS/MS 10 0 1 1 281350 281350 0 15948 275 16827 40832 32629 32629 1 15164 0 YSVQLLTPANLLAK ALNHLGEIGTKTTLRYSVQLLTPANLLAKI RYSVQLLTPANLLAKINGKDSIEKEHVEEI R Y S A K I 2 0 1 0 0 1 0 0 0 0 4 1 0 0 1 1 1 0 1 1 0 0 14 0 1529.8817 Q9Y265 Q9Y265 405 418 RUVBL1 RuvB-like 1 yes yes 2 0.00019642 174.23 By MS/MS 6.5 0.5 1 1 2 2639600 2639600 0 15949 2815 16828 40833;40834 32630;32631 32630 2 18667 0 YTAAVPYR DEHRCASKYGRDWERYTAAVPYRLLPGIF_ YGRDWERYTAAVPYRLLPGIF_________ R Y T Y R L 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 2 1 0 0 8 0 939.48142 Q9UBM7 Q9UBM7 462 469 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.0022304 140.98 By MS/MS By matching 5.33 3.37 2 1 1 2 1 1 1 7 2 11950000 11819000 131330 15950 2701 16829 40835;40836;40837;40838;40839;40840;40841;40842;40843 32632;32633;32634;32635;32636;32637 32632 6 1104900 205650 YTACLCDDNPK YLISSIPLQGAFNYKYTACLCDDNPKTFYW FNYKYTACLCDDNPKTFYWDFYTNRTVQIA K Y T P K T 1 0 1 2 2 0 0 0 0 0 1 1 0 0 1 0 1 0 1 0 0 0 11 0 1355.5486 P12273 P12273 86 96 PIP Prolactin-inducible protein yes yes 2 0.03501 81.525 By MS/MS 9.5 0.5 1 1 2 492080 492080 0 15951 591 16830 40844;40845 32638 32638 0 20928 0 YTAESSDTLCPR IVMPTTKEKCPRCWKYTAESSDTLCPRCAE CWKYTAESSDTLCPRCAEVVSGK_______ K Y T P R C 1 1 0 1 1 0 1 0 0 0 1 0 0 0 1 2 2 0 1 0 0 0 12 0 1398.6085 Q9NSE4 Q9NSE4 993 1004 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 2.3837E-05 175.65 By MS/MS 4.5 0.5 1 1 2 2621200 2621200 0 15952 2570 16831 40846;40847 32639 32639 1 217680 0 YTAGPQPLNTFYK PMVPLQIILPLIISKYTAGPQPLNTFYKAM SKYTAGPQPLNTFYKAMPYRLLLGLEYALL K Y T Y K A 1 0 1 0 0 1 0 1 0 0 1 1 0 1 2 0 2 0 2 0 0 0 13 0 1498.7456 O00400 O00400 366 378 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 0.0045628 103.43 By MS/MS 1 0 1 1 118600 118600 0 15953 102 16832 40848 32640 32640 1 28580 0 YTALNLIGPR MPKDSNLLLEDVTWKYTALNLIGPRAVDVL DVTWKYTALNLIGPRAVDVLSELSYAPMTP K Y T P R A 1 1 1 0 0 0 0 1 0 1 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1116.6291 Q8NCN5 Q8NCN5 621 630 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 7.5662E-05 155.58 By MS/MS 4.5 0.5 1 1 2 916690 916690 0 15954 1953 16833 40849;40850 32641 32641 1 74614 0 YTAQQFR ILLALIEGVGILLTRYTAQQFRNAPPFLED GVGILLTRYTAQQFRNAPPFLEDPSQLPPK R Y T F R N 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 7 0 912.44537 O60830 O60830 136 142 TIMM17B Mitochondrial import inner membrane translocase subunit Tim17-B yes yes 2 0.044235 94.006 By MS/MS By matching 9.33 0.471 2 1 2 1 4971800 4942200 29590 15955 281 16834 40851;40852;40853 32642 32642 1 125180 67476 YTAQVDAEEK EKKFNALKVPVPEDKYTAQVDAEEKEDVKS VPEDKYTAQVDAEEKEDVKSCAEWVSLSKA K Y T E K E 2 0 0 1 0 1 2 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1152.5299 O75947 O75947 86 95 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 1.1868E-05 173.24 By MS/MS 9 0 1 1 1382200 1382200 0 15956 356 16835 40854 32643 32643 1 27202 0 YTAQVDAEEKEDVK EKKFNALKVPVPEDKYTAQVDAEEKEDVKS KYTAQVDAEEKEDVKSCAEWVSLSKARIVE K Y T V K S 2 0 0 2 0 1 3 0 0 0 0 2 0 0 0 0 1 0 1 2 0 0 14 1 1623.7628 O75947 O75947 86 99 ATP5H ATP synthase subunit d, mitochondrial yes yes 2;3 1.0081E-43 336.33 By MS/MS 9.33 0.471 2 1 3 13965000 13965000 0 15957 356 16836 40855;40856;40857 32644;32645 32645 2 280670 0 YTAVVLNR PFTNILCGIIFVERRYTAVVLNRLIKEAGK IIFVERRYTAVVLNRLIKEAGKQDPELAYI R Y T N R L 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 8 0 934.52362 Q9UPY3 Q9UPY3 452 459 DICER1 Endoribonuclease Dicer yes yes 2 0.03867 86.794 By MS/MS By matching 1.67 0.471 1 2 1 2 417680 208420 209260 15958 2803 16837 40858;40859;40860 32646 32646 1 70496 247310 YTEFLTGLGR NSELAILSNEHGSYRYTEFLTGLGRLIELK HGSYRYTEFLTGLGRLIELKDCQPDKVYLG R Y T G R L 0 1 0 0 0 0 1 2 0 0 2 0 0 1 0 0 2 0 1 0 0 0 10 0 1155.5924 P49815 P49815 1571 1580 TSC2 Tuberin yes yes 2 3.1201E-05 160.59 By MS/MS 2 0 1 1 217700 217700 0 15959 965 16838 40861 32647 32647 1 73637 0 YTEQITNEK LDVLEEIPKNAAYRKYTEQITNEKLAMVKA NAAYRKYTEQITNEKLAMVKAEPDVKKLED K Y T E K L 0 0 1 0 0 1 2 0 0 1 0 1 0 0 0 0 2 0 1 0 0 0 9 0 1124.535 Q16718 Q16718 47 55 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2 1.5778E-15 232.83 By MS/MS 10 0 1 1 3190500 3190500 0 15960 1558 16839 40862 32648 32648 1 171960 0 YTGEDFDEDLR WMNGLSVYQIKVHRKYTGEDFDEDLRTVLR VHRKYTGEDFDEDLRTVLRRSGCKNEKIAF K Y T L R T 0 1 0 3 0 0 2 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1358.5626 Q14204 Q14204 2967 2977 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.2764E-06 194.94 By MS/MS 2 0.816 1 1 1 3 3336800 3336800 0 15961 1433 16840 40863;40864;40865 32649;32650;32651 32649 2 909900 0 YTGTLDCAK IKCLLQIQASSGESKYTGTLDCAKKLYQEF SSGESKYTGTLDCAKKLYQEFGIRGIYKGT K Y T A K K 1 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 1 0 0 0 9 0 1027.4644 O43772 O43772 149 157 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0017819 124.08 By MS/MS 7.5 0.5 1 1 2 2715000 2715000 0 15962 234 16841 40866;40867 32652 32652 1 34962 0 YTGYGNAAGLLAAR FLFVLCSESVPRFIKYTGYGNAAGLLAARG KYTGYGNAAGLLAARGLMAGGRPEGQYSED K Y T A R G 4 1 1 0 0 0 0 3 0 0 2 0 0 0 0 0 1 0 2 0 0 0 14 0 1396.7099 Q9NPQ8;Q9NVN3 Q9NPQ8 410 423 RIC8A;RIC8B Synembryn-A;Synembryn-B yes no 2 2.5101E-11 240.1 By MS/MS 5.5 0.5 1 1 2 1453200 1453200 0 15963 2535 16842 40868;40869 32653 32653 1 12939 0 YTIYSPK FLTLRERNKIKFGKRYTIYSPKDGQPCMDH NKIKFGKRYTIYSPKDGQPCMDHDRQTGEG R Y T P K D 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 2 0 0 0 7 0 870.44872 Q9P2J5 Q9P2J5 237 243 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.032587 102.77 By MS/MS 3 0 1 1 2250600 2250600 0 15964 2684 16843 40870 32654 32654 1 41180 0 YTKDHTVR EPLCETCVEAHQRVKYTKDHTVRSTGPAKS EAHQRVKYTKDHTVRSTGPAKSRDGERTVY K Y T V R S 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 8 1 1018.5196 Q13263 Q13263 186 193 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 0.0020544 148.99 By MS/MS 5.2 1.17 2 1 1 1 5 1422800 1422800 0 15965 1367 16844 40871;40872;40873;40874;40875 32655;32656 32656 2 116200 0 YTLDEFGTAR TQAMEALQDRPVLYKYTLDEFGTARRSTVV PVLYKYTLDEFGTARRSTVVRGFIDALTRG K Y T A R R 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 10 0 1171.551 Q9Y2V7 Q9Y2V7 264 273 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.0013672 116.52 By MS/MS 5 0 1 1 1450500 1450500 0 15966 2845 16845 40876 32657 32657 1 14548 0 YTPSQQGVAFNSGAK PVRAADKLAPAQYIRYTPSQQGVAFNSGAK YTPSQQGVAFNSGAKQRVIRMVEMQKDPME R Y T A K Q 2 0 1 0 0 2 0 2 0 0 0 1 0 1 1 2 1 0 1 1 0 0 15 0 1553.7474 Q13573 Q13573 179 193 SNW1 SNW domain-containing protein 1 yes yes 2 0.00093991 124.51 By MS/MS 5 0 1 1 1373400 1373400 0 15967 1398 16846 40877 32658 32658 1 13774 0 YTQGGLENLELSR NPHNHLYCQQYAEVKYTQGGLENLELSRKY VKYTQGGLENLELSRKYFAQALKLNNRNMR K Y T S R K 0 1 1 0 0 1 2 2 0 0 3 0 0 0 0 1 1 0 1 0 0 0 13 0 1478.7365 Q15006 Q15006 200 212 EMC2 ER membrane protein complex subunit 2 yes yes 2 2.348E-24 282.21 By MS/MS 8.5 0.5 1 1 2 7623800 7623800 0 15968 1470 16847 40878;40879 32659 32659 1 97347 0 YTQPNICR LDCQTVIRDVEQQFKYTQPNICRNPVCANR DVEQQFKYTQPNICRNPVCANRRRFLLDTN K Y T C R N 0 1 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 8 0 1050.4917 Q14566 Q14566 174 181 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.047932 83.265 By MS/MS 4 0 1 1 1073300 1073300 0 15969 1444 16848 40880 32660 32660 1 101010 0 YTQQGFGNLPICMAK KDIELSPEAQAKIDRYTQQGFGNLPICMAK YTQQGFGNLPICMAKTHLSLSHQPDKKGVP R Y T A K T 1 0 1 0 1 2 0 2 0 1 1 1 1 1 1 0 1 0 1 0 0 0 15 0 1726.8171 Q6UB35 Q6UB35 895 909 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 4.8059E-05 193.15 By MS/MS 4 0 2 2 1719700 1719700 0 15970 1728 16849;16850 40881;40882 32661;32662 32662 920 2 161840 0 YTRPTPVQK VEMGEIIMGNIELTRYTRPTPVQKHAIPII NIELTRYTRPTPVQKHAIPIIKEKRDLMAC R Y T Q K H 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 2 0 1 1 0 0 9 1 1088.5978 O00571;O15523 O00571 200 208 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.0079969 112.11 By MS/MS By matching 5.33 0.471 2 1 2 1 16254000 16165000 88718 15971 116 16851 40883;40884;40885 32663 32663 1 157210 74504 YTSQIVGR LVSLILLGKVQQLPKYTSQIVGRFIKPLSN KVQQLPKYTSQIVGRFIKPLSNAYHELAQV K Y T G R F 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 0 8 0 922.48723 Q9UNS2 Q9UNS2 244 251 COPS3 COP9 signalosome complex subunit 3 yes yes 2 0.0045756 127.46 By MS/MS 7 0 1 1 1640100 1640100 0 15972 2793 16852 40886 32664 32664 1 25747 0 YTTPEDATPEPGEDPR AGKSKIEDYFPEFARYTTPEDATPEPGEDP TTPEDATPEPGEDPRVTRAKYFIRDEFLRI R Y T P R V 1 1 0 2 0 0 3 1 0 0 0 0 0 0 4 0 3 0 1 0 0 0 16 0 1773.7693 P63092;Q5JWF2 P63092 318 333 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.00030468 135.1 By MS/MS By matching 7 0 2 1 1 1568400 1536400 32045 15973 1193 16853 40887;40888 32665 32665 1 24118 57712 YTTPEDATPEPGEDPRVTR AGKSKIEDYFPEFARYTTPEDATPEPGEDP EDATPEPGEDPRVTRAKYFIRDEFLRISTA R Y T T R A 1 2 0 2 0 0 3 1 0 0 0 0 0 0 4 0 4 0 1 1 0 0 19 1 2129.9865 P63092;Q5JWF2 P63092 318 336 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 3 0.0060557 84.62 By MS/MS By matching 7 0 2 1 1 1990600 1921600 69026 15974 1193 16854 40889;40890 32666 32666 1 30165 124310 YTTTSSSSR GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ GSSTIKYTTTSSSSRKSYKH__________ K Y T S R K 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 1 0 0 0 9 0 988.44615 CON__P02538;P02538;CON__P04259;CON__P48668;P48668 CON__P04259 551 559 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 0.00053682 149.57 By MS/MS By MS/MS 4.3 3.23 2 2 2 1 1 1 1 4 6 1355700 590280 765390 + 15975 44;56;40 16855 40891;40892;40893;40894;40895;40896;40897;40898;40899;40900 32667;32668;32669;32670;32671 32669 5 50595 731190 YTVQDESHSEWVSCVR RDKTIKLWNTLGVCKYTVQDESHSEWVSCV TVQDESHSEWVSCVRFSPNSSNPIIVSCGW K Y T V R F 0 1 0 1 1 1 2 0 1 0 0 0 0 0 0 3 1 1 1 3 0 0 16 0 1980.8636 P63244 P63244 140 155 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2;3 4.8516E-11 236.42 By MS/MS 8 0 2 2 14859000 14859000 0 15976 1202 16856 40901;40902 32672;32673 32673 2 187590 0 YTVYCSLIK LSNLFHGMDKNTPVRYTVYCSLIKVAASCG KNTPVRYTVYCSLIKVAASCGAIQYIPTEL R Y T I K V 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 1 1 0 2 1 0 0 9 0 1145.5791 Q7L2H7 Q7L2H7 121 129 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 3.1423E-06 180.45 By MS/MS 8.5 1.12 1 1 1 1 4 43612000 43612000 0 15977 1762 16857 40903;40904;40905;40906 32674;32675;32676 32674 3 695530 0 YVAAAFPSACGK HMLILGITSPAGKKRYVAAAFPSACGKTNL KKRYVAAAFPSACGKTNLAMMRPALPGWKV R Y V G K T 4 0 0 0 1 0 0 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 12 0 1240.591 Q16822 Q16822 297 308 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.019459 85.533 By MS/MS 6 0.816 1 1 1 3 5550100 5550100 0 15978 1560 16858 40907;40908;40909 32677;32678 32677 2 53552 0 YVAEIEKEKEENEK RDQSLKILNPEEIEKYVAEIEKEKEENEKK KYVAEIEKEKEENEKKKQKKAS________ K Y V E K K 1 0 1 0 0 0 6 0 0 1 0 3 0 0 0 0 0 0 1 1 0 0 14 2 1736.8469 O14818 O14818 228 241 PSMA7 Proteasome subunit alpha type-7 yes yes 3 0.011481 88.552 By MS/MS 8 0 1 1 1355500 1355500 0 15979 140 16859 40910 32679 32679 1 17113 0 YVALTSLLK NILGRFLLNNDKNIRYVALTSLLKTVQTDH NDKNIRYVALTSLLKTVQTDHNAVQRHRST R Y V L K T 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 1 0 1 1 0 0 9 0 1006.6063 O43747 O43747 326 334 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.012637 95.815 By MS/MS 4 0 1 1 615900 615900 0 15980 231 16860 40911 32680 32680 1 57960 0 YVALVQEK VAASLATTLTKIALRYVALVQEKKKQNSFV LTKIALRYVALVQEKKKQNSFVAEAMLLMA R Y V E K K 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 8 0 948.52803 P53618 P53618 568 575 COPB1 Coatomer subunit beta yes yes 2 0.02386 93.429 By MS/MS 3.5 0.5 1 1 2 14257000 14257000 0 15981 1033 16861 40912;40913 32681 32681 1 1330000 0 YVANLFPYK PLNPIKQDVKKGKLRYVANLFPYKGYIWNY KKGKLRYVANLFPYKGYIWNYGAIPQTWED R Y V Y K G 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 2 1 0 0 9 0 1113.5859 Q15181 Q15181 80 88 PPA1 Inorganic pyrophosphatase yes yes 2 0.0077208 104.45 By MS/MS 8 0 1 1 288970 288970 0 15982 1494 16862 40914 32682 32682 1 3648.3 0 YVAQAHDKPR DPKDVREWQHEEFYRYVAQAHDKPRYTLHY EEFYRYVAQAHDKPRYTLHYKTDAPLNIRS R Y V P R Y 2 1 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 10 1 1183.6098 Q12931 Q12931 317 326 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.00010481 167.12 By MS/MS By matching 6 1.07 3 2 1 1 6 1 7212200 7194200 18046 15983 1340 16863 40915;40916;40917;40918;40919;40920;40921 32683;32684 32684 2 77439 15155 YVDEASKK IRQSISKALVAYYQKYVDEASKKEIKDILI LVAYYQKYVDEASKKEIKDILIQYDRTLLV K Y V K K E 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 0 0 8 1 938.47091 P62249 P62249 99 106 RPS16 40S ribosomal protein S16 yes yes 3 0.052159 90.657 By MS/MS 10 0 1 1 2280700 2280700 0 15984 1145 16864 40922 32685 32685 1 122920 0 YVDEASKKEIK IRQSISKALVAYYQKYVDEASKKEIKDILI YYQKYVDEASKKEIKDILIQYDRTLLVADP K Y V I K D 1 0 0 1 0 0 2 0 0 1 0 3 0 0 0 1 0 0 1 1 0 0 11 2 1308.6925 P62249 P62249 99 109 RPS16 40S ribosomal protein S16 yes yes 2 0.0018423 139.38 By MS/MS 10 0 1 1 105230 105230 0 15985 1145 16865 40923 32686 32686 1 5671.3 0 YVDGDLCPDGIR VRDGPQWRDGIIVLKYVDGDLCPDGIRKKS VLKYVDGDLCPDGIRKKSTTIRFTCSESQV K Y V I R K 0 1 0 3 1 0 0 2 0 1 1 0 0 0 1 0 0 0 1 1 0 0 12 0 1378.6187 P11717 P11717 1455 1466 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00061934 132.25 By MS/MS 2 0.816 1 1 1 3 612600 612600 0 15986 583 16866 40924;40925;40926 32687 32687 1 97526 0 YVDIAIPCNNK NLPTIALCNTDSPLRYVDIAIPCNNKGAHS SPLRYVDIAIPCNNKGAHSVGLMWWMLARE R Y V N K G 1 0 2 1 1 0 0 0 0 2 0 1 0 0 1 0 0 0 1 1 0 0 11 0 1305.6387 P08865 P08865 156 166 RPSA 40S ribosomal protein SA yes yes 2 0.0010151 148.69 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 37470000 37325000 144770 15987 529 16867 40927;40928;40929;40930;40931 32688;32689;32690 32689 3 589380 260730 YVDIGVLASDLQR KQRVIQYLTSNKCGKYVDIGVLASDLQRVY GKYVDIGVLASDLQRVYSIDYGRRKRNAFR K Y V Q R V 1 1 0 2 0 1 0 1 0 1 2 0 0 0 0 1 0 0 1 2 0 0 13 0 1447.7671 O15381 O15381 29 41 NVL Nuclear valosin-containing protein-like yes yes 2 5.2215E-05 178.67 By MS/MS 4 0 1 1 196410 196410 0 15988 187 16868 40932 32691;32692 32691 2 18483 0 YVDVLNPSGTQR PVNMYSRRAAGTRARYVDVLNPSGTQRSEP RARYVDVLNPSGTQRSEPALAPADFVAPLA R Y V Q R S 0 1 1 1 0 1 0 1 0 0 1 0 0 0 1 1 1 0 1 2 0 0 12 0 1347.6783 O15027 O15027 2193 2204 SEC16A Protein transport protein Sec16A yes yes 2 0.04394 72.531 By MS/MS 2 0 1 1 114900 114900 0 15989 155 16869 40933 32693 32693 1 38863 0 YVECSALTQK PETAEKLARDLKAVKYVECSALTQKGLKNV LKAVKYVECSALTQKGLKNVFDEAILAALE K Y V Q K G 1 0 0 0 1 1 1 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 10 0 1197.57 P60953 P60953 154 163 CDC42 Cell division control protein 42 homolog yes yes 2 1.3009E-10 213.53 By MS/MS 9.5 0.5 1 1 2 2366800 2366800 0 15990 1100 16870 40934;40935 32694;32695 32694 2 49633 0 YVENFGLIDGR SLDDSAKKVLLEKYKYVENFGLIDGRLTIC EKYKYVENFGLIDGRLTICTISCFFAIVAL K Y V G R L 0 1 1 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 1 1 0 0 11 0 1281.6354 Q15005 Q15005 74 84 SPCS2 Signal peptidase complex subunit 2 yes yes 2 1.1367E-05 171.92 By MS/MS 9 0 1 1 1534300 1534300 0 15991 1469 16871 40936 32696 32696 1 30194 0 YVENPSQVLNCER KPLHLLDCIHVLLIRYVENPSQVLNCERRR IRYVENPSQVLNCERRRFTNLCLDAVCGYL R Y V E R R 0 1 2 0 1 1 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1606.741 O75694 O75694 1334 1346 NUP155 Nuclear pore complex protein Nup155 yes yes 2 1.5905E-11 234.79 By MS/MS 3.5 0.5 1 1 2 957000 957000 0 15992 341 16872 40937;40938 32697 32697 1 44550 0 YVETQAK GIDRYNPENLATLERYVETQAKENAYDLEA ENLATLERYVETQAKENAYDLEANLAVLKL R Y V A K E 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 7 0 837.42323 Q9UBQ5 Q9UBQ5 32 38 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.008979 139.31 By MS/MS By matching 8.4 1.02 1 2 1 1 3 2 54513000 54472000 41611 15993 2703 16873 40939;40940;40941;40942;40943 32698 32698 1 1038700 60447 YVETQAKENAYDLEANLAVLK GIDRYNPENLATLERYVETQAKENAYDLEA KENAYDLEANLAVLKLYQFNPAFFQTTVTA R Y V L K L 4 0 2 1 0 1 3 0 0 0 3 2 0 0 0 0 1 0 2 2 0 0 21 1 2381.2115 Q9UBQ5 Q9UBQ5 32 52 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 3 1.2596E-08 205.88 By MS/MS 9 0 1 1 774190 774190 0 15994 2703 16874 40944 32699;32700 32700 2 15236 0 YVGESEANIR AREPKVVNGPEILNKYVGESEANIRKLFAD EILNKYVGESEANIRKLFADAEEEQRRLGA K Y V I R K 1 1 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 10 0 1136.5462 P46459 P46459 294 303 NSF Vesicle-fusing ATPase yes yes 2 0.00011009 153.24 By MS/MS By MS/MS 5.75 0.829 2 1 1 3 1 7984900 7879000 105950 15995 912 16875 40945;40946;40947;40948 32701;32702;32703 32702 3 78286 88979 YVGESEANIRK AREPKVVNGPEILNKYVGESEANIRKLFAD ILNKYVGESEANIRKLFADAEEEQRRLGAN K Y V R K L 1 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 1 1 0 0 11 1 1264.6412 P46459 P46459 294 304 NSF Vesicle-fusing ATPase yes yes 2 0.0041852 108.57 By MS/MS 5 0 1 1 1045200 1045200 0 15996 912 16876 40949 32704 32704 1 10483 0 YVGETQPTGQIK AREILKQIEYRNLFKYVGETQPTGQIKIKR LFKYVGETQPTGQIKIKREDYESLPKEVAS K Y V I K I 0 0 0 0 0 2 1 2 0 1 0 1 0 0 1 0 2 0 1 1 0 0 12 0 1319.6721 Q9Y3Z3 Q9Y3Z3 456 467 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 2 0.0016175 113.67 By MS/MS 5 0 1 1 323970 323970 0 15997 2886 16877 40950 32705 32705 1 3249.3 0 YVHADAPTNK QLDSVRVWLGKHYKKYVHADAPTNKTLAGL KHYKKYVHADAPTNKTLAGLVVQLLQFQED K Y V N K T 2 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 0 0 10 0 1114.5407 Q92922 Q92922 66 75 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 0.024857 85.807 By MS/MS 2.25 0.829 1 1 2 4 610400 610400 0 15998 2079 16878 40951;40952;40953;40954 32706;32707 32707 2 30778 0 YVIYIER KGQQIGKVVQVYRKKYVIYIERVQREKANG VVQVYRKKYVIYIERVQREKANGTTVHVGI K Y V E R V 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 2 1 0 0 7 0 954.51747 P61254;Q9UNX3 P61254 78 84 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.043896 94.262 By MS/MS By matching 9.33 0.471 2 1 2 1 6279100 6221000 58185 15999 1119;2794 16879 40955;40956;40957 32708 32708 1 128800 132680 YVLCTAPR LLIGDPSVAKSQLLRYVLCTAPRAIPTTGR AKSQLLRYVLCTAPRAIPTTGRGSSGVGLT R Y V P R A 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 8 0 978.49569 P25205 P25205 357 364 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0071584 116.9 By MS/MS 5 0.816 1 1 1 3 3697100 3697100 0 16000 719 16880 40958;40959;40960 32709 32709 1 281890 0 YVLDDLIVAK SDKMWLVRHLEIIRKYVLDDLIVAKNLMVQ EIIRKYVLDDLIVAKNLMVQCFPPHYEIFK K Y V A K N 1 0 0 2 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 2 0 0 10 0 1147.6489 O60645 O60645 285 294 EXOC3 Exocyst complex component 3 yes yes 2 0.00033344 138.06 By MS/MS 4.5 0.5 1 1 2 1078900 1078900 0 16001 267 16881 40961;40962 32710;32711 32711 2 37625 0 YVLKPATEGK GQEERERLVRMYFDKYVLKPATEGKQRLKL MYFDKYVLKPATEGKQRLKLAQFDYGRKCS K Y V G K Q 1 0 0 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 1 1 0 0 10 1 1104.6179 Q9NVI7 Q9NVI7 540 549 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.022298 106.68 By MS/MS 5 0 1 1 1186800 1186800 0 16002 2598 16882 40963 32712 32712 1 11903 0 YVLVAGITPTPLGEGK RLSVLERLKDQADGKYVLVAGITPTPLGEG VLVAGITPTPLGEGKSTVTIGLVQALTAHL K Y V G K S 1 0 0 0 0 0 1 3 0 1 2 1 0 0 2 0 2 0 1 2 0 0 16 0 1613.9029 Q6UB35 Q6UB35 414 429 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00029513 173.04 By MS/MS 4.5 0.5 1 1 2 7154300 7154300 0 16003 1728 16883 40964;40965 32713;32714 32714 2 620080 0 YVMGNNPADLLAVDSR VATDLDTGRPSTTVRYVMGNNPADLLAVDS VMGNNPADLLAVDSRTGKLTLKNKVTKEQY R Y V S R T 2 1 2 2 0 0 0 1 0 0 2 0 1 0 1 1 0 0 1 2 0 0 16 0 1733.8407 Q02413 Q02413 423 438 DSG1 Desmoglein-1 yes yes 2 7.8624E-31 253.97 By MS/MS By MS/MS 5.24 2.96 2 2 2 2 1 2 1 2 1 2 8 9 8206500 4012000 4194500 16004 1277 16884 40966;40967;40968;40969;40970;40971;40972;40973;40974;40975;40976;40977;40978;40979;40980;40981;40982 32715;32716;32717;32718;32719;32720;32721;32722;32723;32724;32725;32726;32727;32728;32729;32730;32731;32732;32733;32734;32735 32720 765 20 314230 2125500 YVMTTTTLER TENMPIKINLIAPPRYVMTTTTLERTEGLS IAPPRYVMTTTTLERTEGLSVLSQAMAVIK R Y V E R T 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 4 0 1 1 0 0 10 0 1213.6013 P05198 P05198 235 244 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.00033073 148.94 By MS/MS 8 0.816 2 2 2 6 8904900 8904900 0 16005 489 16885;16886 40983;40984;40985;40986;40987;40988 32736;32737 32737 194 2 139830 0 YVPPSLRDGASR GELEPVQATQNKTGKYVPPSLRDGASRRGE TGKYVPPSLRDGASRRGESMQPNRRADDNA K Y V S R R 1 2 0 1 0 0 0 1 0 0 1 0 0 0 2 2 0 0 1 1 0 0 12 1 1316.6837 O75821 O75821 213 224 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.0060497 120.99 By MS/MS 7 0 1 1 2806600 2806600 0 16006 348 16887 40989 32738 32738 1 44058 0 YVQDFHPR ITVDPERDDVEAMARYVQDFHPRLLGLTGS DVEAMARYVQDFHPRLLGLTGSTKQVAQAS R Y V P R L 0 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 8 0 1060.509 O43819 O43819 180 187 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.018551 101.25 By MS/MS 8 0 1 1 1667200 1667200 0 16007 238 16888 40990 32739 32739 1 21049 0 YVQQLQR PSRFLASVLHNGLGRYVQQLQRLSFSVSRD VLHNGLGRYVQQLQRLSFSVSRDGASSRGA R Y V Q R L 0 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 933.50321 Q8N983 Q8N983 22 28 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.011038 132.72 By MS/MS By matching 9.33 0.471 2 1 2 1 9419200 9307700 111470 16008 1933 16889 40991;40992;40993 32740;32741 32741 2 331410 254190 YVRPFLNSISK LAKTGQAAELGGLLKYVRPFLNSISKAKAA GLLKYVRPFLNSISKAKAARLVRSLLDLFL K Y V S K A 0 1 1 0 0 0 0 0 0 1 1 1 0 1 1 2 0 0 1 1 0 0 11 1 1322.7347 O00231 O00231 72 82 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 3 0.0085577 96.756 By MS/MS 7 0 1 1 1815400 1815400 0 16009 93 16890 40994 32742 32742 1 28498 0 YVSAQPLAGR VVEDLLYVLVGVDGRYVSAQPLAGRQSRTF GVDGRYVSAQPLAGRQSRTFLVDPNLDLSI R Y V G R Q 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1060.5665 Q9BSJ2 Q9BSJ2 232 241 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00033505 137.95 By MS/MS 4.5 0.5 1 1 2 3789800 3789800 0 16010 2307 16891 40995;40996 32743 32743 1 316180 0 YVTGAQRLEEAQK STAIEEYNCALTEKKYVTGAQRLEEAQKCL KKYVTGAQRLEEAQKCLKLLKSRKCFDLKI K Y V Q K C 2 1 0 0 0 2 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 13 1 1491.7682 O43264 O43264 131 143 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.0094154 107.09 By MS/MS 4 0 1 1 359370 359370 0 16011 200 16892 40997 32744 32744 0 33819 0 YVTLLQELER ILTTNLSKPFMRLEKYVTLLQELERHMEDT MRLEKYVTLLQELERHMEDTHPDHQDILKA K Y V E R H 0 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 1 1 0 0 10 0 1262.6871 Q15052 Q15052 383 392 ARHGEF6 Rho guanine nucleotide exchange factor 6 yes yes 2 2.6172E-05 163.88 By MS/MS 5 0 1 1 374740 374740 0 16012 1483 16893 40998 32745 32745 1 3758.4 0 YVTTLLYKPI DGVMVLSATHRYKKKYVTTLLYKPI_____ RYKKKYVTTLLYKPI_______________ K Y V P I - 0 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 2 0 2 1 0 0 10 1 1209.7009 Q9Y478;O43741 Q9Y478 261 270 PRKAB1;PRKAB2 5-AMP-activated protein kinase subunit beta-1;5-AMP-activated protein kinase subunit beta-2 yes no 2 0.0072721 117.04 By MS/MS 7.5 0.5 1 1 2 356400 356400 0 16013 230 16894 40999;41000 32746 32746 1 5381.5 0 YVVGLIIK RWKILPRNQCEGIKKYVVGLIIKTSSDPTC QCEGIKKYVVGLIIKTSSDPTCVEKEKVYI K Y V I K T 0 0 0 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 1 2 0 0 8 0 903.57934 O14980 O14980 105 112 XPO1 Exportin-1 yes yes 2 0.042574 85.306 By MS/MS 4 0 1 1 467280 467280 0 16014 153 16895 41001 32747 32747 1 43974 0 YVVGQSFAK KPPPPPKKIYNYLDKYVVGQSFAKKVLSVA YNYLDKYVVGQSFAKKVLSVAVYNHYKRIY K Y V A K K 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 0 1 2 0 0 9 0 997.52328 O76031 O76031 179 187 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.044911 78.149 By MS/MS 5 0 1 1 735940 735940 0 16015 360 16896 41002 32748 32748 1 7381.1 0 YVVLCESPQDKR FHQGDSKLLIESLEKYVVLCESPQDKRTLL LEKYVVLCESPQDKRTLLVNCQNKSLSQSF K Y V K R T 0 1 0 1 1 1 1 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 12 1 1492.7344 Q8TC07 Q8TC07 180 191 TBC1D15 TBC1 domain family member 15 yes yes 2 0.0039395 114.89 By MS/MS 5 0 1 1 267290 267290 0 16016 1987 16897 41003 32749 32749 1 2680.8 0 YVVNHLGR GIVATVFGATGFLGRYVVNHLGRMGSQVII ATGFLGRYVVNHLGRMGSQVIIPYRCDKYD R Y V G R M 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 2 0 0 8 0 956.5192 Q16795 Q16795 68 75 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.0064694 118.69 By MS/MS 7.5 0.5 1 1 2 2104100 2104100 0 16017 1559 16898 41004;41005 32750 32750 1 30567 0 YVVVTGITPTPLGEGK LLSALERLKHRPDGKYVVVTGITPTPLGEG VVVTGITPTPLGEGKSTTTIGLVQALGAHL K Y V G K S 0 0 0 0 0 0 1 3 0 1 1 1 0 0 2 0 3 0 1 3 0 0 16 0 1629.8978 P11586 P11586 371 386 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 5.0608E-05 219.43 By MS/MS 4.5 0.5 1 1 2 19821000 19821000 0 16018 582 16899 41006;41007 32751;32752 32751 2 1727700 0 YWEAFLPEAK KYLESLVQTQQQLIKYWEAFLPEAKAIA__ QQLIKYWEAFLPEAKAIA____________ K Y W A K A 2 0 0 0 0 0 2 0 0 0 1 1 0 1 1 0 0 1 1 0 0 0 10 0 1252.6128 O60749;Q13596 O60749 507 516 SNX2;SNX1 Sorting nexin-2;Sorting nexin-1 no no 2 0.013643 89.886 By MS/MS 5 0 1 1 571470 571470 0 16019 274;1401 16900 41008 32753 32753 1 5731.6 0 YWLAQQAAK MSVVNFEKPKTKRYKYWLAQQAAKAMAPTS KTKRYKYWLAQQAAKAMAPTSPQI______ K Y W A K A 3 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 9 0 1077.5607 Q9BYD2 Q9BYD2 250 258 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.0064527 117.93 By MS/MS 8 0 1 1 0 0 0 16020 2369 16901 41009 32754 32754 1 0 0 YWLCAATGPSIK DGGDIINALCFSPNRYWLCAATGPSIKIWD PNRYWLCAATGPSIKIWDLEGKIIVDELKQ R Y W I K I 2 0 0 0 1 0 0 1 0 1 1 1 0 0 1 1 1 1 1 0 0 0 12 0 1365.6751 P63244 P63244 246 257 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 3.9889E-06 190.88 By MS/MS 8 0 1 1 6244000 6244000 0 16021 1202 16902 41010 32755 32755 1 78829 0 YWYLGPLK LRWGSFRDAGVKVSKYWYLGPLKIKAAHFF AGVKVSKYWYLGPLKIKAAHFFSTLKEWPQ K Y W L K I 0 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 0 1 2 0 0 0 8 0 1038.5539 Q53H12 Q53H12 224 231 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.023239 96.048 By MS/MS 7 0 1 1 483380 483380 0 16022 1589 16903 41011 32756 32756 1 7588.2 0 YYACEALYNIVK EPVLTCFNDADSRLRYYACEALYNIVKVAR RLRYYACEALYNIVKVARGAVLPHFNVLFD R Y Y V K V 2 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 3 1 0 0 12 0 1505.7225 Q08AM6 Q08AM6 111 122 VAC14 Protein VAC14 homolog yes yes 2 0.0013028 119.53 By MS/MS 4 0 1 1 213080 213080 0 16023 1316 16904 41012 32757 32757 1 20052 0 YYASEIAGQTTSK LEAGKPFIKEASMAKYYASEIAGQTTSKCI AKYYASEIAGQTTSKCIEWMGGVGYTKDYP K Y Y S K C 2 0 0 0 0 1 1 1 0 1 0 1 0 0 0 2 2 0 2 0 0 0 13 0 1417.6725 P45954 P45954 372 384 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 6.1792E-17 254.07 By MS/MS 7.5 0.5 1 1 2 2519400 2519400 0 16024 904 16905 41013;41014 32758 32758 1 38767 0 YYDDTYPSVK AILILDNDGDRLFAKYYDDTYPSVKEQKAF RLFAKYYDDTYPSVKEQKAFEKNIFNKTHR K Y Y V K E 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 1 1 0 3 1 0 0 10 0 1249.5503 P61923 P61923 30 39 COPZ1 Coatomer subunit zeta-1 yes yes 2 1.2725E-07 189.38 By MS/MS By matching 9.33 0.471 2 1 2 1 9167200 9137400 29898 16025 1131 16906 41015;41016;41017 32759;32760 32759 2 215560 68177 YYDDTYPSVKEQK AILILDNDGDRLFAKYYDDTYPSVKEQKAF AKYYDDTYPSVKEQKAFEKNIFNKTHRTDS K Y Y Q K A 0 0 0 2 0 1 1 0 0 0 0 2 0 0 1 1 1 0 3 1 0 0 13 1 1634.7464 P61923 P61923 30 42 COPZ1 Coatomer subunit zeta-1 yes yes 2 1.0088E-10 230.95 By MS/MS 9 0 1 1 913530 913530 0 16026 1131 16907 41018 32761 32761 1 17978 0 YYDQICSIEPK RPLDKHEGALETLLRYYDQICSIEPKFPFS TLLRYYDQICSIEPKFPFSENQICLTFTWK R Y Y P K F 0 0 0 1 1 1 1 0 0 2 0 1 0 0 1 1 0 0 2 0 0 0 11 0 1414.6439 Q8WUM4 Q8WUM4 71 81 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 1.1001E-07 202.03 By MS/MS 4 0 1 1 1421900 1421900 0 16027 2018 16908 41019 32762 32762 1 133810 0 YYEDNKQFFGR AKVGTLVGEDKYGNKYYEDNKQFFGRHRWV YGNKYYEDNKQFFGRHRWVVYTTEMNGKNT K Y Y G R H 0 1 1 1 0 1 1 1 0 0 0 1 0 2 0 0 0 0 2 0 0 0 11 1 1465.6626 Q9UI09 Q9UI09 48 58 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 0.0013612 136.52 By MS/MS 10 0 1 1 241910 241910 0 16028 2733 16909 41020 32763 32763 1 13038 0 YYEQDLALAK GYAHYCLGNYQEAVKYYEQDLALAKDLHDK QEAVKYYEQDLALAKDLHDKLSQAKAYCNL K Y Y A K D 2 0 0 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1212.6027 Q96AY4 Q96AY4 656 665 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.0003892 135.43 By MS/MS 2 0 1 1 295190 295190 0 16029 2110 16910 41021 32764 32764 1 99844 0 YYGYTGAFR DEQGENKCVPNSNERYYGYTGAFRCLAENA PNSNERYYGYTGAFRCLAENAGDVAFVKDV R Y Y F R C 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 1 0 3 0 0 0 9 0 1096.4978 P02788;CON__Q29443;CON__Q0IIK2 P02788 544 552 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes no 2 0.00057869 148.04 By MS/MS 1 0 1 1 165510 0 165510 16030 459 16911 41022 32765 32765 1 0 165510 YYKNIGLGFK KRVLLGETGKEKLPRYYKNIGLGFKTPKEA EKLPRYYKNIGLGFKTPKEAIEGTYIDKKC R Y Y F K T 0 0 1 0 0 0 0 2 0 1 1 2 0 1 0 0 0 0 2 0 0 0 10 1 1201.6495 P62280 P62280 36 45 RPS11 40S ribosomal protein S11 yes yes 2;3 0.00032197 138.98 By MS/MS 9 0 2 2 1078400 1078400 0 16031 1152 16912 41023;41024 32766;32767 32766 2 21223 0 YYKTIDDLK KHGNSHQGEPRDYSKYYKTIDDLKNQILNL PRDYSKYYKTIDDLKNQILNLTTDNANILL K Y Y L K N 0 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 2 0 0 0 9 1 1157.5968 CON__P13645;P13645 CON__P13645 199 207 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.041021 120.31 By matching By MS/MS 3.5 0.5 1 1 1 1 690900 149630 541270 + 16032 50 16913 41025;41026 32768 32768 1 14081 68895 YYKVDENGK KNKHKRKKVKLAVLKYYKVDENGKISRLRR KLAVLKYYKVDENGKISRLRRECPSDECGA K Y Y G K I 0 0 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 2 1 0 0 9 1 1114.5295 P62979 P62979 105 113 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 2;3 0.00038574 166.3 By MS/MS 10 0 2 2 13810000 13810000 0 16033 1190 16914 41027;41028 32769;32770 32770 2 744290 0 YYNKYINVK SPSGIFGAFQRGYYRYYNKYINVKKGSISG QRGYYRYYNKYINVKKGSISGITMVLACYV R Y Y V K K 0 0 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 3 1 0 0 9 1 1203.6288 P56134 P56134 51 59 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.0081302 125.81 By MS/MS 10 0 1 1 956080 956080 0 16034 1066 16915 41029 32771 32771 1 51529 0 YYNQVGR YSCSTTGSSLNAIYRYYNQVGRKPTMKWST SSLNAIYRYYNQVGRKPTMKWSTIDRWPTH R Y Y G R K 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 7 0 898.42972 P22830 P22830 209 215 FECH Ferrochelatase, mitochondrial yes yes 2 0.037091 99.384 By MS/MS 7 0 1 1 807150 807150 0 16035 698 16916 41030 32772 32772 1 12671 0 YYNSDVHR VQPLTQQQVAQMQLKYYNSDVHRAAFVLPE VAQMQLKYYNSDVHRAAFVLPEFARKALND K Y Y H R A 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 2 1 0 0 8 0 1052.4676 P19623 P19623 278 285 SRM Spermidine synthase yes yes 2 0.0029896 134.81 By MS/MS 8 0 1 1 874940 874940 0 16036 664 16917 41031 32773 32773 1 11046 0 YYPEQEPQLLSGIGR KDYVLAVEAYHSVIKYYPEQEPQLLSGIGR YYPEQEPQLLSGIGRISLQIGDIKTAEKYF K Y Y G R I 0 1 0 0 0 2 2 2 0 1 2 0 0 0 2 1 0 0 2 0 0 0 15 0 1748.8733 Q8WVT3 Q8WVT3 574 588 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.00066485 129.76 By MS/MS 4 0 1 1 841140 841140 0 16037 2029 16918 41032 32774 32774 1 79157 0 YYPTEDVPR KNGGTRVVKLRKMPRYYPTEDVPRKLLSHG LRKMPRYYPTEDVPRKLLSHGKKPFSQHVR R Y Y P R K 0 1 0 1 0 0 1 0 0 0 0 0 0 0 2 0 1 0 2 1 0 0 9 0 1138.5295 Q02878 Q02878 115 123 RPL6 60S ribosomal protein L6 yes yes 2 0.0092734 101.72 By MS/MS By matching 7.33 0.471 2 1 2 1 6278700 6210600 68153 16038 1281 16919 41033;41034;41035 32775 32775 1 96731 122740 YYQTIGNHASYYK GVTSVHSRFYDLSSKYYQTIGNHASYYKDA SKYYQTIGNHASYYKDALRFLGCVDIKDLP K Y Y Y K D 1 0 1 0 0 1 0 1 1 1 0 1 0 0 0 1 1 0 4 0 0 0 13 0 1606.7416 Q9UNM6 Q9UNM6 162 174 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 1.631E-08 223.77 By MS/MS 7 0 1 1 713410 713410 0 16039 2791 16920 41036 32776 32776 1 11199 0 YYSYGLEK DAKEGYRYGLECLFRYYSYGLEKKFRLDIF GLECLFRYYSYGLEKKFRLDIFKDFQEETV R Y Y E K K 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 3 0 0 0 8 0 1021.4757 Q6PKG0 Q6PKG0 957 964 LARP1 La-related protein 1 yes yes 2 0.020914 98.629 By MS/MS 3 0 1 1 1053000 1053000 0 16040 1722 16921 41037 32777 32777 1 19267 0 YYTEFPTVLDITAEDPSK QGQGHGAQLLETVHRYYTEFPTVLDITAED EFPTVLDITAEDPSKSYVKLRDFVLVKLCQ R Y Y S K S 1 0 0 2 0 0 2 0 0 1 1 1 0 1 2 1 3 0 2 1 0 0 18 0 2087.9939 O14929 O14929 263 280 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 7.8047E-17 253.15 By MS/MS 6.5 0.5 1 1 2 280210 280210 0 16041 146 16922 41038;41039 32778 32778 1 2673.5 0 YYTGNYDQYVK GVCTNIIHMHNKKLKYYTGNYDQYVKTRLE KKLKYYTGNYDQYVKTRLELEENQMKRFHW K Y Y V K T 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 1 0 4 1 0 0 11 0 1412.6248 Q9UG63 Q9UG63 305 315 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 1.484E-06 184.71 By MS/MS 5 0 1 1 4827800 4827800 0 16042 2719 16923 41040 32779 32779 1 48421 0 YYTLFGR LQPGAKCVCGKNPAKYYTLFGRSY______ VCGKNPAKYYTLFGRSY_____________ K Y Y G R S 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 2 0 0 0 7 0 918.45995 P07814 P07814 1504 1510 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.010749 133.47 By MS/MS 5 2 1 1 1 1 1 1 1 7 3758100 3758100 0 16043 512 16924 41041;41042;41043;41044;41045;41046;41047 32780;32781;32782 32781 3 130740 0 YYVLNALK GQPVKVRVSYQKLLKYYVLNALKHRPPKAQ SYQKLLKYYVLNALKHRPPKAQKKRYLFRS K Y Y L K H 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 2 1 0 0 8 0 982.54877 Q6P2Q9 Q6P2Q9 453 460 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.021955 97.473 By MS/MS 2 0 1 1 383890 383890 0 16044 1708 16925 41048 32783 32783 1 129850 0 YYVTIIDAPGHR GITIDISLWKFETSKYYVTIIDAPGHRDFI TSKYYVTIIDAPGHRDFIKNMITGTSQADC K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.00026583 143.24 By MS/MS 6.4 2.73 1 1 2 2 2 1 1 10 37208000 37208000 0 16045 1209 16926 41049;41050;41051;41052;41053;41054;41055;41056;41057;41058 32784;32785;32786;32787;32788;32789 32787 6 670240 0 YYYVPADFVEYEK PVLHHTTEGYPVVPKYYYVPADFVEYEKNN PKYYYVPADFVEYEKNNPGSQKRFPSNCGR K Y Y E K N 1 0 0 1 0 0 2 0 0 0 0 1 0 1 1 0 0 0 4 2 0 0 13 0 1684.7661 Q93100 Q93100 409 421 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 0.0036714 107.55 By MS/MS 4 0 1 1 248310 248310 0 16046 2089 16927 41059 32790 32790 1 23367 0